Citrus Sinensis ID: 019722

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330------
Protein Sequence
MLETVKYLLGSAGASGYGSKSTAEQVTDGCPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWTSKLGSNSNEASRLWAASELLVSRDPKSVFDPLSAND
Secondary Structure (PSIPRED)
cHHHHHHHHcccccccccccccHHHHHcccccccccEEEEccccccHHHHHHHHHHHcccEEEEEcccHHHHHHHHHHHHHHcccccEEEEEcccccHHHHHHHHHHHHHccccccEEEEccccccccccccccccHHHHcccccHHHHHHHHHHHHHHHHHccccccccEEEEccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHccccccEEEEEEccccccccccccccHHHHHHHHHHHHHHcccHHHHHHHHHHHHcccccccccccccccccccccccccccHHHHHHHHHHHHHHHccccccccccccccc
Secondary Structure Prediction (SSPRO)
cHHHHHHHHcccccccccccccHHHHHcccccccccEEEEEccccHHHHHHHHHHHHcccEEEEEEccHHHHHHHHHHHHHHcccccEEEEEEcHccHHHHHHHHHHHHHcccccEEEEEccccccccccccccccEEHHHHHHHHHHHHHHHHHHHHHHHcccccccEEEEEEEcHHHHccccccccccHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEccccccEcccHHHccHHHHHHHHHHHHHHHHccccccccEEEEEEEccccccccccEccccccccccHHcccHHHHHHHHHHHHHHHccccccccccccccc
Coil and Loop (DISEMBL)
MLETVKYLLGsagasgygskstaeqvtdgcpnlssVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARlasdcpgsdivvlpldlsslsSVRNFVSQFHSLNLPLNLLINnagkfahqhaisedgieMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGqisrnkshydATRAYALSKLANVLHTKELAQRLKQMEANvtvncvhpgivrtrltreregFITDLVFFLTSKllktipqgaattcyvaihprlvnvsgkyfadcneawtsklgsnsnEASRLWAASELLvsrdpksvfdplsand
Flexible Loop (DISEMBL)
MLETVKYLLGsagasgygskSTAEQVTDGCPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKarlasdcpgsdIVVLPLDLSSLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKatgiqgrivNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQmeanvtvncvhpgivrtrltrereGFITDLVFFLTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWTSKLGSNSNEASRLWAASellvsrdpksvfdplsand
Low Complexity Region (SEG)
MLETVKyllgsagasgygsksTAEQVTDGCPNLSSVTAIITGATSGIGAETARVLAKRGARLVLParslkaaeeakarlasDCPGSDIvvlpldlsslssvRNFVSQFHSlnlplnllinnAGKFAHQHAISEDGIEMTFATNYLGHFlltklllkkMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWTSKLGSNSNEASRLWAASELLVSRDPKSVFDPLSAND
Disordered region (IsUnstruct)
****************************GCPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSL*********LASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWTSKL*********LWA*********************
Disordered Region (DISOPRED)
*****KYLLGSAGASGYGSKSTAEQVTDGCPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWTSK*GSNSNEASRLWAASELLVSRDPKS*********
Disordered Region (DISEMBL)
MLETVKYLLGSAG**************DGCPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSL***********SDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWTSKLGSNSNEASRLWAASELLVSRDPKSVFDPLSAND
Disordered Region (DISPRO)
*L**V****G*A******S**TAEQVTDGCPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWTSKLGSNSNEASRLWAASELLVSRD************
Transmembrane Helix (TMHMM)
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Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
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TM Helix, Signal Peptide (MEMSAT_SVM)
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TM Helix, Signal Peptide (Phobius)
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Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MLETVKYLLGSAGASGYGSKSTAEQVTDGCPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWTSKLGSNSNEASRLWAASELLVSRDPKSVFDPLSAND
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	336	2.2.26 [Sep-21-2011]
A2RVM0	322	Short-chain dehydrogenase	no	no	0.907	0.947	0.464	7e-73
Q6RVV4	316	Short-chain dehydrogenase	N/A	no	0.913	0.971	0.463	4e-70
P59837	316	Retinol dehydrogenase 12	yes	no	0.785	0.835	0.428	2e-45
Q8BYK4	316	Retinol dehydrogenase 12	yes	no	0.785	0.835	0.404	7e-43
Q9NZC7	414	WW domain-containing oxid	yes	no	0.872	0.707	0.356	1e-41
Q5R9W5	414	WW domain-containing oxid	yes	no	0.872	0.707	0.360	2e-41
Q91WL8	414	WW domain-containing oxid	no	no	0.875	0.710	0.354	3e-41
Q96NR8	316	Retinol dehydrogenase 12	no	no	0.806	0.857	0.401	3e-41
Q5F389	414	WW domain-containing oxid	yes	no	0.872	0.707	0.372	4e-41
Q9HBH5	336	Retinol dehydrogenase 14	no	no	0.812	0.812	0.406	5e-41

>sp|A2RVM0|TIC32_ARATH Short-chain dehydrogenase TIC 32, chloroplastic OS=Arabidopsis thaliana GN=TIC32 PE=2 SV=1

 Score =  274 bits (700), Expect = 7e-73,   Method: Compositional matrix adjust.
 Identities = 143/308 (46%), Positives = 200/308 (64%), Gaps = 3/308 (0%)

Query: 7   YLLGSAGASGYGSKSTAEQVTDGCPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPA 66
           +  GS GASG+ S+STAE+VT G    + +TAI+TGA+SGIG ETARVL+ RG  +V+  
Sbjct: 2   WFFGSKGASGFSSRSTAEEVTHGVDG-TGLTAIVTGASSGIGVETARVLSLRGVHVVMAV 60

Query: 67  RSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLPLNLLINNAGKFA 126
           R+  +  + K  +    PG+ + V+ LDLSS+ SVR F S++ S  LPLNLLINNAG  A
Sbjct: 61  RNTDSGAKVKEDIVKQVPGAKLDVMELDLSSMQSVRKFASEYKSTGLPLNLLINNAGIMA 120

Query: 127 HQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDM 186
               +S+D IE+ FATN+LGHFLLTKLLL  M  T++ +  +GRIVN+SS  H +   + 
Sbjct: 121 CPFMLSKDNIELQFATNHLGHFLLTKLLLDTMKSTSRESKREGRIVNLSSEAHRFSYPEG 180

Query: 187 IRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLT 246
           +R+      +KS Y + RAY  SKL NVLH  EL ++LK+   N+T N +HPG + T L 
Sbjct: 181 VRF--DKINDKSSYSSMRAYGQSKLCNVLHANELTKQLKEDGVNITANSLHPGAIMTNLG 238

Query: 247 REREGFITDLVFFLTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWTSKLGSN 306
           R    ++   V  +   +LK++PQGAATTCYVA++P++  VSG+YF D N A    L  +
Sbjct: 239 RYFNPYLAVAVGAVAKYILKSVPQGAATTCYVALNPQVAGVSGEYFQDSNIAKPLPLVKD 298

Query: 307 SNEASRLW 314
           +  A ++W
Sbjct: 299 TELAKKVW 306

Involved in protein precursor import into chloroplasts. Part of the redox regulon consisting of TIC32, TIC 55 and TIC62.
Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 1EC: .EC: 1EC: .EC: -

>sp|Q6RVV4|TIC32_PEA Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum sativum GN=TIC32 PE=1 SV=1

 Score =  265 bits (677), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 144/311 (46%), Positives = 204/311 (65%), Gaps = 4/311 (1%)

Query: 13  GASGYGSKSTAEQVTDGCPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAA 72
           G SG+   STAEQVT G  + + +TAI+TGA+SGIGAET RVLA RGA +++  R++ AA
Sbjct: 9   GVSGFSGSSTAEQVTHGI-DATGLTAIVTGASSGIGAETTRVLALRGAHVIMGVRNMVAA 67

Query: 73  EEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAIS 132
           ++ K  +  D P + +  + LDLSSL SV+ F S+F+S   PLN+LINNAG  A    +S
Sbjct: 68  KDVKDTILKDIPSAKVDAIELDLSSLDSVKKFASEFNSSGRPLNILINNAGIMACPFKLS 127

Query: 133 EDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQ 192
           +D IE+ FATN++GHFLLT LLL  M +T + +  +GRIVNV+S  H +   + IR+  +
Sbjct: 128 KDNIELQFATNHIGHFLLTNLLLDTMKKTTRESKKEGRIVNVASEAHRFAYPEGIRF-DK 186

Query: 193 ISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGF 252
           I+ ++S Y+  RAY  SKLANVLH  +L + LK+   N+T N +HPG + T L R     
Sbjct: 187 IN-DQSSYNNWRAYGQSKLANVLHANQLTKHLKEDGVNITANSLHPGTIVTNLFRHNSA- 244

Query: 253 ITDLVFFLTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWTSKLGSNSNEASR 312
           +  L+  +   +LK + QGAATTCYVA+HP++  VSG+YF+D N   T+  G + + A +
Sbjct: 245 VNGLINVIGKLVLKNVQQGAATTCYVALHPQVKGVSGEYFSDSNVYKTTPHGKDVDLAKK 304

Query: 313 LWAASELLVSR 323
           LW  S  LV +
Sbjct: 305 LWDFSINLVKQ 315

Involved in protein precursor import into chloroplasts. Part of the redox regulon consisting of TIC32, TIC 55 and TIC62. Has a NADPH-dependent dehydrogenase activity, but only after preincubation with lipids.

Pisum sativum (taxid: 3888)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|P59837|RDH12_BOVIN Retinol dehydrogenase 12 OS=Bos taurus GN=RDH12 PE=2 SV=1

 Score =  183 bits (464), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 123/287 (42%), Positives = 167/287 (58%), Gaps = 23/287 (8%)

Query: 39  IITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSL 98
           +ITGA +GIG ETAR LA+RGAR+ +  R +   E A + + +D   S ++V  LDLS  
Sbjct: 43  VITGANTGIGKETARELARRGARVYIACRDVLKGESAASEIQADTKNSQVLVRKLDLSDT 102

Query: 99  SSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKM 158
            S+R F   F +    L++LINNAG     ++ + DG E   A N+LGHFLLT LLL ++
Sbjct: 103 KSIRAFAEGFLAEEKQLHILINNAGVMLCPYSKTADGFETHLAVNHLGHFLLTHLLLGRL 162

Query: 159 IETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQIS----RNKSHYDATRAYALSKLANV 214
            E+A A     R+VN+SS  H         +LG+I     +   +Y+   AY  SKLANV
Sbjct: 163 KESAPA-----RVVNLSSVAH---------HLGKIRFHDLQGDKYYNLGFAYCHSKLANV 208

Query: 215 LHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSKLLKTIPQGAAT 274
           L T+ELA+RLK     VT   VHPGIVR++L   R  F+  L++ L S  LKT  +GA T
Sbjct: 209 LFTRELAKRLKG--TGVTTYAVHPGIVRSKLV--RHSFLLCLLWRLFSPFLKTTWEGAQT 264

Query: 275 TCYVAIHPRLVNVSGKYFADCNEAWTSKLGSNSNEASRLWAAS-ELL 320
           + + A+   L  +SGKYF+DC + W S    N+  A RLW  S ELL
Sbjct: 265 SLHCALAEGLEPLSGKYFSDCKKTWVSPRARNNKTAERLWNVSCELL 311

Exhibits an oxidoreductive catalytic activity towards retinoids. Most efficient as an NADPH-dependent retinal reductase. Displays high activity toward 9-cis and all-trans-retinol. Also involved in the metabolism of short-chain aldehydes. No steroid dehydrogenase activity detected. Might be the key enzyme in the formation of 11-cis-retinal from 11-cis-retinol during regeneration of the cone visual pigments.

Bos taurus (taxid: 9913)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q8BYK4|RDH12_MOUSE Retinol dehydrogenase 12 OS=Mus musculus GN=Rdh12 PE=2 SV=1

 Score =  174 bits (442), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 116/287 (40%), Positives = 164/287 (57%), Gaps = 23/287 (8%)

Query: 39  IITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSL 98
           +ITGA +GIG ETAR LA+RGAR+ +  R +   E A + + +D   S ++V  LDLS  
Sbjct: 43  VITGANTGIGKETARELARRGARVYIACRDVLKGESAASEIRADTKNSQVLVRKLDLSDT 102

Query: 99  SSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKM 158
            S+R F  +F +    L++LINNAG     ++ + DG E  F  N+LGHFLLT LLL+++
Sbjct: 103 KSIRAFAERFLAEEKKLHILINNAGVMMCPYSKTTDGFETHFGVNHLGHFLLTYLLLERL 162

Query: 159 IETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQIS----RNKSHYDATRAYALSKLANV 214
            E+A A     R+VN+SS  H          +G+I     + +  Y +  AY  SKLAN+
Sbjct: 163 KESAPA-----RVVNLSSIAH---------LIGKIRFHDLQGQKRYCSAFAYGHSKLANL 208

Query: 215 LHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSKLLKTIPQGAAT 274
           L T+ELA+RL+     VT   VHPG+V + +T  R  ++  L++ L S   K+  QGA T
Sbjct: 209 LFTRELAKRLQG--TGVTAYAVHPGVVLSEIT--RNSYLLCLLWRLFSPFFKSTSQGAQT 264

Query: 275 TCYVAIHPRLVNVSGKYFADCNEAWTSKLGSNSNEASRLWAAS-ELL 320
           + + A+   L  +SGKYF+DC   W S    N   A RLW  S ELL
Sbjct: 265 SLHCALAEDLEPLSGKYFSDCKRMWVSSRARNKKTAERLWNVSCELL 311

Exhibits an oxidoreductive catalytic activity towards retinoids. Most efficient as an NADPH-dependent retinal reductase. Displays high activity toward 9-cis and all-trans-retinol. Also involved in the metabolism of short-chain aldehydes. No steroid dehydrogenase activity detected. Might be the key enzyme in the formation of 11-cis-retinal from 11-cis-retinol during regeneration of the cone visual pigments.

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q9NZC7|WWOX_HUMAN WW domain-containing oxidoreductase OS=Homo sapiens GN=WWOX PE=1 SV=1

 Score =  170 bits (431), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 111/311 (35%), Positives = 169/311 (54%), Gaps = 18/311 (5%)

Query: 17  YGSKSTAEQVTDGCPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAK 76
           Y   +TA ++  G  + +    ++TGA SGIG ETA+  A  GA ++L  R++  A EA 
Sbjct: 107 YDGSTTAMEILQG-RDFTGKVVVVTGANSGIGFETAKSFALHGAHVILACRNMARASEAV 165

Query: 77  ARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAISEDGI 136
           +R+  +   + +  + LDL+ L SV++F   F + N+PL++L+ NA  FA   ++++DG+
Sbjct: 166 SRILEEWHKAKVEAMTLDLALLRSVQHFAEAFKAKNVPLHVLVCNAATFALPWSLTKDGL 225

Query: 137 EMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQ---- 192
           E TF  N+LGHF L +LL   +  +A A     R++ VSS  H +   D+   LG+    
Sbjct: 226 ETTFQVNHLGHFYLVQLLQDVLCRSAPA-----RVIVVSSESHRF--TDINDSLGKLDFS 278

Query: 193 -ISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPG-IVRTRLTRERE 250
            +S  K+ Y A  AY  SKL N+L + EL +RL      VT N VHPG ++ + +   R 
Sbjct: 279 RLSPTKNDYWAMLAYNRSKLCNILFSNELHRRLSPR--GVTSNAVHPGNMMYSNI--HRS 334

Query: 251 GFITDLVFFLTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWTSKLGSNSNEA 310
            ++  L+F L     K++ QGAATT Y A  P L  + G YF +C     S    +   A
Sbjct: 335 WWVYTLLFTLARPFTKSMQQGAATTVYCAAVPELEGLGGMYFNNCCRCMPSPEAQSEETA 394

Query: 311 SRLWAASELLV 321
             LWA SE L+
Sbjct: 395 RTLWALSERLI 405

Putative oxidoreductase. Acts as a tumor suppressor and plays a role in apoptosis. Required for normal bone development (By similarity). May function synergistically with p53/TP53 to control genotoxic stress-induced cell death. Plays a role in TGFB1 signaling and TGFB1-mediated cell death. May also play a role in tumor necrosis factor (TNF)-mediated cell death. Inhibits Wnt signaling, probably by sequestering DVL2 in the cytoplasm.

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q5R9W5|WWOX_PONAB WW domain-containing oxidoreductase OS=Pongo abelii GN=WWOX PE=2 SV=1

 Score =  170 bits (430), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 112/311 (36%), Positives = 169/311 (54%), Gaps = 18/311 (5%)

Query: 17  YGSKSTAEQVTDGCPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAK 76
           Y   +TA ++  G  + +    ++TGA SGIG ETA+  A  GA ++L  R++  A EA 
Sbjct: 107 YDGSTTALEILQG-RDFTGKVVVVTGANSGIGFETAKSFALHGAHVILACRNMARASEAV 165

Query: 77  ARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAISEDGI 136
           +R+  +   + +  + LDL+ L SV++F   F + N+PL++L+ NA  FA   ++++DG+
Sbjct: 166 SRILEEWHKAKVEAVTLDLALLRSVQHFAEAFKAKNVPLHVLVCNAATFALPWSLTKDGL 225

Query: 137 EMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQ---- 192
           E TF  N+LGHF L +LL   +  +A A     R++ VSS  H +   D+   LG+    
Sbjct: 226 ETTFQVNHLGHFYLVQLLQDVLCRSAPA-----RVIVVSSESHRF--TDINDSLGKLDFS 278

Query: 193 -ISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPG-IVRTRLTRERE 250
            +S  K+ Y A  AY  SKL NVL + EL +RL      VT N VHPG ++ + +   R 
Sbjct: 279 RLSPTKNDYWAMLAYNRSKLCNVLFSNELHRRLSPR--GVTSNAVHPGNMMYSNI--HRS 334

Query: 251 GFITDLVFFLTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWTSKLGSNSNEA 310
            ++  L+F L     K++ QGAATT Y A  P L  + G YF +C     S    +   A
Sbjct: 335 WWVYTLLFTLARPFTKSMQQGAATTVYCAAAPELEGLGGMYFNNCCRCMPSPEAQSEETA 394

Query: 311 SRLWAASELLV 321
             LWA SE L+
Sbjct: 395 RTLWALSERLI 405

Putative oxidoreductase. Acts as a tumor suppressor and plays a role in apoptosis. May function synergistically with p53/TP53 to control genotoxic stress-induced cell death. Plays a role in TGFB1 signaling and TGFB1-mediated cell death. May also play a role in tumor necrosis factor (TNF)-mediated cell death. Required for normal bone development. Inhibits Wnt signaling, probably by sequestering DVL2 in the cytoplasm.

Pongo abelii (taxid: 9601)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q91WL8|WWOX_MOUSE WW domain-containing oxidoreductase OS=Mus musculus GN=Wwox PE=1 SV=1

 Score =  169 bits (428), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 110/310 (35%), Positives = 166/310 (53%), Gaps = 16/310 (5%)

Query: 17  YGSKSTAEQVTDGCPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAK 76
           Y   +TA ++  G  + +    ++TGA SGIG ETA+  A  GA ++L  R+L  A EA 
Sbjct: 107 YDGSTTAMEILQG-RDFTGKVVLVTGANSGIGFETAKSFALHGAHVILACRNLSRASEAV 165

Query: 77  ARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAISEDGI 136
           +R+  +   + +  + LDL+ L SV++F   F + N+ L++L+ NAG FA    +++DG+
Sbjct: 166 SRILEEWHKAKVEAMTLDLAVLRSVQHFAEAFKAKNVSLHVLVCNAGTFALPWGLTKDGL 225

Query: 137 EMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWF-----SGDMIRYLG 191
           E TF  N+LGHF L +LL   +  ++ A     R++ VSS  H +      SG +   L 
Sbjct: 226 ETTFQVNHLGHFYLVQLLQDVLCRSSPA-----RVIVVSSESHRFTDINDSSGKLD--LS 278

Query: 192 QISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREG 251
           ++S  +S Y A  AY  SKL N+L + EL +RL      VT N VHPG +       R  
Sbjct: 279 RLSPPRSDYWAMLAYNRSKLCNILFSNELHRRLSPR--GVTSNAVHPGNMMYSAI-HRNS 335

Query: 252 FITDLVFFLTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWTSKLGSNSNEAS 311
           ++  L+F L     K++ QGAATT Y A+ P L  + G YF +C     S+   +   A 
Sbjct: 336 WVYKLLFTLARPFTKSMQQGAATTVYCAVAPELEGLGGMYFNNCCRCLPSEEAQSEETAR 395

Query: 312 RLWAASELLV 321
            LW  SE L+
Sbjct: 396 ALWELSERLI 405

Putative oxidoreductase. Acts as a tumor suppressor and plays a role in apoptosis. May function synergistically with p53/TP53 to control genotoxic stress-induced cell death. Plays a role in TGFB1 signaling and TGFB1-mediated cell death. Inhibits Wnt signaling, probably by sequestering DVL2 in the cytoplasm (By similarity). May also play a role in tumor necrosis factor (TNF)-mediated cell death. Required for normal bone development.

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q96NR8|RDH12_HUMAN Retinol dehydrogenase 12 OS=Homo sapiens GN=RDH12 PE=1 SV=3

 Score =  169 bits (427), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 118/294 (40%), Positives = 162/294 (55%), Gaps = 23/294 (7%)

Query: 32  NLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVL 91
            L     +ITGA +GIG ETAR LA RGAR+ +  R +   E A + +  D   S ++V 
Sbjct: 36  QLPGKVVVITGANTGIGKETARELASRGARVYIACRDVLKGESAASEIRVDTKNSQVLVR 95

Query: 92  PLDLSSLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLT 151
            LDLS   S+R F   F +    L++LINNAG     ++ + DG E     N+LGHFLLT
Sbjct: 96  KLDLSDTKSIRAFAEGFLAEEKQLHILINNAGVMMCPYSKTADGFETHLGVNHLGHFLLT 155

Query: 152 KLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQIS----RNKSHYDATRAYA 207
            LLL+++  +A A     R+VNVSS  H         ++G+I     +++  Y    AY 
Sbjct: 156 YLLLERLKVSAPA-----RVVNVSSVAH---------HIGKIPFHDLQSEKRYSRGFAYC 201

Query: 208 LSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSKLLKT 267
            SKLANVL T+ELA+RL+     VT   VHPG+VR+ L R     +  L++ L S  +KT
Sbjct: 202 HSKLANVLFTRELAKRLQG--TGVTTYAVHPGVVRSELVRHSS--LLCLLWRLFSPFVKT 257

Query: 268 IPQGAATTCYVAIHPRLVNVSGKYFADCNEAWTSKLGSNSNEASRLWAAS-ELL 320
             +GA T+ + A+   L  +SGKYF+DC   W S    N+  A RLW  S ELL
Sbjct: 258 AREGAQTSLHCALAEGLEPLSGKYFSDCKRTWVSPRARNNKTAERLWNVSCELL 311

Exhibits an oxidoreductive catalytic activity towards retinoids. Most efficient as an NADPH-dependent retinal reductase. Displays high activity toward 9-cis and all-trans-retinol. Also involved in the metabolism of short-chain aldehydes. No steroid dehydrogenase activity detected. Might be the key enzyme in the formation of 11-cis-retinal from 11-cis-retinol during regeneration of the cone visual pigments.

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q5F389|WWOX_CHICK WW domain-containing oxidoreductase OS=Gallus gallus GN=WWOX PE=2 SV=2

 Score =  168 bits (426), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 116/311 (37%), Positives = 164/311 (52%), Gaps = 18/311 (5%)

Query: 17  YGSKSTAEQVTDGCPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAK 76
           Y   STA ++  G  +LS    IITGA SGIG ETA+  A  GA ++L  R++    +A 
Sbjct: 107 YDGNSTAMEILQG-RDLSGKVIIITGANSGIGFETAKSFALHGAYVILACRNMSRGNDAV 165

Query: 77  ARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAISEDGI 136
            R+  +   + +  + LDL+SL SV+NF   F S N+PL++L+ NA  F     ++EDG+
Sbjct: 166 QRILEEWHKAKVEAMTLDLASLRSVQNFAEAFKSKNMPLHILVCNAAIFGSSWCLTEDGL 225

Query: 137 EMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWF-----SGDMIRYLG 191
           E TF  N+LGHF L +LL   +  ++ A     R+V VSS  H +      SG +   L 
Sbjct: 226 ESTFQVNHLGHFYLVQLLEDILRRSSPA-----RVVVVSSESHRFTEIKDSSGKLDFSL- 279

Query: 192 QISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPG-IVRTRLTRERE 250
            +S +K  Y A  AY  SKL N+L + EL +RL      VT N VHPG ++ + +   R 
Sbjct: 280 -LSPSKKEYWAMLAYNRSKLCNILFSNELNRRLSPH--GVTSNSVHPGNMIYSSI--HRN 334

Query: 251 GFITDLVFFLTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWTSKLGSNSNEA 310
            ++  L+F L     K++ QGAATT Y A    L  + G YF +C     S    N   A
Sbjct: 335 WWVYTLLFTLARPFTKSMQQGAATTVYCATAAELEGLGGMYFNNCCRCLPSAEARNELTA 394

Query: 311 SRLWAASELLV 321
             LW  SE L+
Sbjct: 395 VALWELSERLI 405

Putative oxidoreductase. Acts as a tumor suppressor and plays a role in apoptosis. May function synergistically with p53/TP53 to control genotoxic stress-induced cell death. Plays a role in TGFB1 signaling and TGFB1-mediated cell death. May also play a role in tumor necrosis factor (TNF)-mediated cell death. Required for normal bone development. Inhibits Wnt signaling.

Gallus gallus (taxid: 9031)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q9HBH5|RDH14_HUMAN Retinol dehydrogenase 14 OS=Homo sapiens GN=RDH14 PE=1 SV=1

 Score =  168 bits (426), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 122/300 (40%), Positives = 171/300 (57%), Gaps = 27/300 (9%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARL------ASDC---PG-- 85
           T +ITGA SG+G  TA  L + GAR+++  R    AEEA  +L      A++C   PG  
Sbjct: 45  TVLITGANSGLGRATAAELLRLGARVIMGCRDRARAEEAAGQLRRELRQAAECGPEPGVS 104

Query: 86  --SDIVVLPLDLSSLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAISEDGIEMTFATN 143
              +++V  LDL+SL SVR F  +       L++LINNAG F   +  +EDG EM F  N
Sbjct: 105 GVGELIVRELDLASLRSVRAFCQEMLQEEPRLDVLINNAGIFQCPYMKTEDGFEMQFGVN 164

Query: 144 YLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDAT 203
           +LGHFLLT LLL  +  +A +     RIV VSS ++ +  GD+      ++  +S Y+ +
Sbjct: 165 HLGHFLLTNLLLGLLKSSAPS-----RIVVVSSKLYKY--GDI--NFDDLNSEQS-YNKS 214

Query: 204 RAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRERE-GFITDLVFFLTS 262
             Y+ SKLAN+L T+ELA+RL+    NVTVN +HPGIVRT L R      +   +F L S
Sbjct: 215 FCYSRSKLANILFTRELARRLEG--TNVTVNVLHPGIVRTNLGRHIHIPLLVKPLFNLVS 272

Query: 263 -KLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWTSKLGSNSNEASRLWAASELLV 321
               KT  +GA T+ Y+A  P +  VSG+YF DC E        + + A +LW  SE++V
Sbjct: 273 WAFFKTPVEGAQTSIYLASSPEVEGVSGRYFGDCKEEELLPKAMDESVARKLWDISEVMV 332

Exhibits an oxidoreductive catalytic activity towards retinoids. Most efficient as an NADPH-dependent retinal reductase. Displays high activity toward 9-cis and all-trans-retinol. No steroid dehydrogenase activity detected.

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	336
225426220	336	PREDICTED: short-chain dehydrogenase TIC	1.0	1.0	0.836	1e-168
356523777	337	PREDICTED: WW domain-containing oxidored	0.991	0.988	0.807	1e-159
224058075	332	predicted protein [Populus trichocarpa]	0.985	0.996	0.831	1e-155
356523779	327	PREDICTED: WW domain-containing oxidored	0.961	0.987	0.786	1e-151
255555681	339	short-chain dehydrogenase, putative [Ric	0.997	0.988	0.827	1e-149
297803718	332	short-chain dehydrogenase/reductase fami	0.988	1.0	0.753	1e-147
15233666	332	Rossmann-fold NAD(P)-binding domain-cont	0.988	1.0	0.744	1e-146
224072256	322	predicted protein [Populus trichocarpa]	0.955	0.996	0.819	1e-137
449452414	334	PREDICTED: short-chain dehydrogenase TIC	0.988	0.994	0.754	1e-133
242091816	360	hypothetical protein SORBIDRAFT_10g00180	0.946	0.883	0.709	1e-127

>gi|225426220|ref|XP_002262981.1| PREDICTED: short-chain dehydrogenase TIC 32, chloroplastic [Vitis vinifera] gi|297742402|emb|CBI34551.3| unnamed protein product [Vitis vinifera]

 Score =  595 bits (1535), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 281/336 (83%), Positives = 311/336 (92%)

Query: 1   MLETVKYLLGSAGASGYGSKSTAEQVTDGCPNLSSVTAIITGATSGIGAETARVLAKRGA 60
           ML+ +KYLLGS GASGYGSKSTAE+VT+ CP+L SVTA+ITGATSGIGAETARVLAKRGA
Sbjct: 1   MLDALKYLLGSFGASGYGSKSTAEEVTENCPDLGSVTAVITGATSGIGAETARVLAKRGA 60

Query: 61  RLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLPLNLLIN 120
           RLVLPARSLKAAEEAKAR+ ++ P S+IVV+ LDLSSL SVR FVS+F SL+LPLNLLIN
Sbjct: 61  RLVLPARSLKAAEEAKARIVAEFPNSEIVVMALDLSSLDSVRCFVSEFESLDLPLNLLIN 120

Query: 121 NAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHS 180
           NAGKF H+HAISEDGIEMTFATNYLGHFLLTKLLL KMIETAK TG+QGRIVNVSS+IHS
Sbjct: 121 NAGKFTHEHAISEDGIEMTFATNYLGHFLLTKLLLNKMIETAKKTGVQGRIVNVSSTIHS 180

Query: 181 WFSGDMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGI 240
           WFSGD+IRYLG I+RNKS YDATRAYA+SKLANVLHTKELAQRLKQM+ANVTVNCVHPGI
Sbjct: 181 WFSGDVIRYLGLITRNKSQYDATRAYAVSKLANVLHTKELAQRLKQMDANVTVNCVHPGI 240

Query: 241 VRTRLTREREGFITDLVFFLTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWT 300
           VRTRLTRE EG +TDL+FFLTSK LKTIPQ AATTCYVA HPRLVNVSGKYFADCNEAWT
Sbjct: 241 VRTRLTRETEGIVTDLIFFLTSKFLKTIPQAAATTCYVATHPRLVNVSGKYFADCNEAWT 300

Query: 301 SKLGSNSNEASRLWAASELLVSRDPKSVFDPLSAND 336
           SKLGSNS EASRLW+ASE++ +RD +++FDPL A+D
Sbjct: 301 SKLGSNSQEASRLWSASEIMTARDSRAIFDPLDASD 336

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356523777|ref|XP_003530511.1| PREDICTED: WW domain-containing oxidoreductase-like isoform 1 [Glycine max]

 Score =  566 bits (1458), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 269/333 (80%), Positives = 300/333 (90%)

Query: 1   MLETVKYLLGSAGASGYGSKSTAEQVTDGCPNLSSVTAIITGATSGIGAETARVLAKRGA 60
           MLETVKYLLGSAG SG+GSK+TAEQVT+   +L S+TAIITGATSGIG ETARVLAKRGA
Sbjct: 1   MLETVKYLLGSAGPSGFGSKTTAEQVTENHADLRSITAIITGATSGIGTETARVLAKRGA 60

Query: 61  RLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLPLNLLIN 120
           RLVLPARS+KAAE+AKAR+ S+CP S+I+V+ LDLSSL+SV NFV+ FHSL LPL+LLIN
Sbjct: 61  RLVLPARSMKAAEDAKARIVSECPDSEIIVMALDLSSLNSVTNFVAHFHSLGLPLHLLIN 120

Query: 121 NAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHS 180
           NAGKFAH+HAISEDG+EMTFATNYLGHF++T LL+KKM+ETAK TG+QGRIVNVSSSIH 
Sbjct: 121 NAGKFAHEHAISEDGVEMTFATNYLGHFVMTNLLVKKMVETAKETGVQGRIVNVSSSIHG 180

Query: 181 WFSGDMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGI 240
           WFSGD I YL  ISRNK HYDATRAYALSKLANV HTKELA+RL+QM ANVTVNCVHPGI
Sbjct: 181 WFSGDAISYLALISRNKRHYDATRAYALSKLANVFHTKELARRLQQMGANVTVNCVHPGI 240

Query: 241 VRTRLTREREGFITDLVFFLTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWT 300
           VRTRLTREREG +TDLVFFL SKLLKTIPQ AATTCYVA HPRL+NVSGKYFADCNE  T
Sbjct: 241 VRTRLTREREGLLTDLVFFLASKLLKTIPQAAATTCYVATHPRLLNVSGKYFADCNETST 300

Query: 301 SKLGSNSNEASRLWAASELLVSRDPKSVFDPLS 333
           SKLGSNS EA+RLWAASE ++SR PK+ FD L+
Sbjct: 301 SKLGSNSTEAARLWAASEFMISRGPKAAFDLLN 333

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224058075|ref|XP_002299444.1| predicted protein [Populus trichocarpa] gi|222846702|gb|EEE84249.1| predicted protein [Populus trichocarpa]

 Score =  554 bits (1428), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 276/332 (83%), Positives = 305/332 (91%), Gaps = 1/332 (0%)

Query: 1   MLETVKYLLGSAGASGYGSKSTAEQVTDGCPNLSSVTAIITGATSGIGAETARVLAKRGA 60
           M E++KYL GSAGASGYGSKST EQVT+ C +L S+TAIITGATSGIGAETARVLAKRGA
Sbjct: 1   MFESLKYLTGSAGASGYGSKSTGEQVTENCGDLHSITAIITGATSGIGAETARVLAKRGA 60

Query: 61  RLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLPLNLLIN 120
           RLVLPARSLKAAE+AKAR+ S+ P ++I+V+ LDLSSL+SVRNFVS+F S +LPLNLLIN
Sbjct: 61  RLVLPARSLKAAEDAKARIISENPDTEIIVMGLDLSSLNSVRNFVSEFESFDLPLNLLIN 120

Query: 121 NAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHS 180
           NAGKFAH+HAISEDGIEMTFATN+LGHFLLTKLLLKKMIETAK TGIQGRIVNVSSSI++
Sbjct: 121 NAGKFAHEHAISEDGIEMTFATNFLGHFLLTKLLLKKMIETAKTTGIQGRIVNVSSSIYN 180

Query: 181 WFSGDMIRYLGQISRNK-SHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPG 239
           WFSGD IRYLGQISRNK   +D TRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPG
Sbjct: 181 WFSGDPIRYLGQISRNKLRDFDPTRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPG 240

Query: 240 IVRTRLTREREGFITDLVFFLTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAW 299
           +VRTRLTREREG +TD+ FFLTSKLLKTIPQ AATTCYVA HPRLVNV+GKYF+DCNEA 
Sbjct: 241 VVRTRLTREREGIVTDMAFFLTSKLLKTIPQAAATTCYVATHPRLVNVTGKYFSDCNEAS 300

Query: 300 TSKLGSNSNEASRLWAASELLVSRDPKSVFDP 331
           TSKLGSNS EA+RLW ASE++VSR  K+VFDP
Sbjct: 301 TSKLGSNSTEAARLWTASEIMVSRGSKAVFDP 332

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356523779|ref|XP_003530512.1| PREDICTED: WW domain-containing oxidoreductase-like isoform 2 [Glycine max]

 Score =  541 bits (1395), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 262/333 (78%), Positives = 291/333 (87%), Gaps = 10/333 (3%)

Query: 1   MLETVKYLLGSAGASGYGSKSTAEQVTDGCPNLSSVTAIITGATSGIGAETARVLAKRGA 60
           MLETVKYLLGSAG SG+GSK+TAEQVT+   +L S+TAIITGATSGIG ETARVLAKRGA
Sbjct: 1   MLETVKYLLGSAGPSGFGSKTTAEQVTENHADLRSITAIITGATSGIGTETARVLAKRGA 60

Query: 61  RLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLPLNLLIN 120
           RLVLPARS+KAAE+AKAR+ S+CP S+I+V+ LDLSSL+SV NFV+ FHSL LPL+LLIN
Sbjct: 61  RLVLPARSMKAAEDAKARIVSECPDSEIIVMALDLSSLNSVTNFVAHFHSLGLPLHLLIN 120

Query: 121 NAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHS 180
           NAGKFAH+HAISEDG+EMTFATNYL          +KM+ETAK TG+QGRIVNVSSSIH 
Sbjct: 121 NAGKFAHEHAISEDGVEMTFATNYL----------EKMVETAKETGVQGRIVNVSSSIHG 170

Query: 181 WFSGDMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGI 240
           WFSGD I YL  ISRNK HYDATRAYALSKLANV HTKELA+RL+QM ANVTVNCVHPGI
Sbjct: 171 WFSGDAISYLALISRNKRHYDATRAYALSKLANVFHTKELARRLQQMGANVTVNCVHPGI 230

Query: 241 VRTRLTREREGFITDLVFFLTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWT 300
           VRTRLTREREG +TDLVFFL SKLLKTIPQ AATTCYVA HPRL+NVSGKYFADCNE  T
Sbjct: 231 VRTRLTREREGLLTDLVFFLASKLLKTIPQAAATTCYVATHPRLLNVSGKYFADCNETST 290

Query: 301 SKLGSNSNEASRLWAASELLVSRDPKSVFDPLS 333
           SKLGSNS EA+RLWAASE ++SR PK+ FD L+
Sbjct: 291 SKLGSNSTEAARLWAASEFMISRGPKAAFDLLN 323

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255555681|ref|XP_002518876.1| short-chain dehydrogenase, putative [Ricinus communis] gi|223541863|gb|EEF43409.1| short-chain dehydrogenase, putative [Ricinus communis]

 Score =  534 bits (1376), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 279/337 (82%), Positives = 310/337 (91%), Gaps = 2/337 (0%)

Query: 1   MLETVKYLLGSAGASGYGSKSTAEQVTDGCPNLSSVTAIITGATSGIGAETARVLAKRGA 60
           MLETVKYL+GSAG S +GSKSTAEQVT+   +L SVTAIITGATSGIGAETARVLAK+GA
Sbjct: 1   MLETVKYLIGSAGPSNFGSKSTAEQVTE-FSDLRSVTAIITGATSGIGAETARVLAKQGA 59

Query: 61  RLVLPARSLKAAEEAKARLASDC-PGSDIVVLPLDLSSLSSVRNFVSQFHSLNLPLNLLI 119
           RLV+PARS+KAAEEAKAR+ SD  P S+I+++ LDLSSL+SV+NFV++F S NLPLNLLI
Sbjct: 60  RLVIPARSMKAAEEAKARIMSDFKPESEIIIMALDLSSLNSVKNFVAEFESFNLPLNLLI 119

Query: 120 NNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIH 179
           NNAG FAH+HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAK TG+QGRIVNVSSSIH
Sbjct: 120 NNAGTFAHEHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKETGVQGRIVNVSSSIH 179

Query: 180 SWFSGDMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPG 239
           SWFSGDMIRYLG+ISRNK HYDATRAYALSKLAN+LHTKELAQRLKQMEANVTVNCVHPG
Sbjct: 180 SWFSGDMIRYLGEISRNKCHYDATRAYALSKLANILHTKELAQRLKQMEANVTVNCVHPG 239

Query: 240 IVRTRLTREREGFITDLVFFLTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAW 299
           IVRTRLTREREG +TD+VFF+ SKLLKTIPQ AATTC+VA  PRL+NVSGKYFADCNEA 
Sbjct: 240 IVRTRLTREREGILTDMVFFMASKLLKTIPQAAATTCFVATSPRLLNVSGKYFADCNEAS 299

Query: 300 TSKLGSNSNEASRLWAASELLVSRDPKSVFDPLSAND 336
            SKLGS+S EAS+LW+ASE++VSRDPK V DPLSA +
Sbjct: 300 ASKLGSSSTEASKLWSASEIMVSRDPKVVSDPLSATE 336

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297803718|ref|XP_002869743.1| short-chain dehydrogenase/reductase family protein [Arabidopsis lyrata subsp. lyrata] gi|297315579|gb|EFH46002.1| short-chain dehydrogenase/reductase family protein [Arabidopsis lyrata subsp. lyrata]

 Score =  526 bits (1354), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 251/333 (75%), Positives = 295/333 (88%), Gaps = 1/333 (0%)

Query: 1   MLETVKYLLGSAGASGYGSKSTAEQVTDGCPNLSSVTAIITGATSGIGAETARVLAKRGA 60
           M+ET KYLLG+AGASG+GSKSTAE+VT+ C +L SVT IITGATSGIGAETARVLAKRGA
Sbjct: 1   MIETGKYLLGAAGASGFGSKSTAEEVTENC-DLRSVTVIITGATSGIGAETARVLAKRGA 59

Query: 61  RLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLPLNLLIN 120
           RL+ PAR++KAAEEAK R+ S+ P ++IVV+ LDLSS++SVRNFV+ F SL+LPLNLLIN
Sbjct: 60  RLIFPARNVKAAEEAKERIVSEFPETEIVVMELDLSSIASVRNFVADFESLDLPLNLLIN 119

Query: 121 NAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHS 180
           NAGK AH+HAISEDGIEMTFATNYLGHFLLT LLLKKMI+TA+ TG+QGRIVNV+S IH 
Sbjct: 120 NAGKLAHEHAISEDGIEMTFATNYLGHFLLTNLLLKKMIQTAEETGVQGRIVNVTSGIHG 179

Query: 181 WFSGDMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGI 240
           WFSGD+I YL  IS+ K  +DATRAYALSKLANVLHTKEL+ RL+++EANVTVNCVHPG+
Sbjct: 180 WFSGDLIEYLRLISQPKCQFDATRAYALSKLANVLHTKELSSRLQKIEANVTVNCVHPGV 239

Query: 241 VRTRLTREREGFITDLVFFLTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWT 300
           VRTRLTR+REG +TDLVFFL SKL+KT+PQ AATTCYVA +PRLVNVSGKYF DCNE   
Sbjct: 240 VRTRLTRDREGLLTDLVFFLASKLVKTVPQAAATTCYVATNPRLVNVSGKYFTDCNETTP 299

Query: 301 SKLGSNSNEASRLWAASELLVSRDPKSVFDPLS 333
           S LGSNS++A++LWAASE+LV++  K+ FDP S
Sbjct: 300 SGLGSNSSDATKLWAASEILVAQHSKASFDPCS 332

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15233666|ref|NP_194136.1| Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana] gi|16612264|gb|AAL27501.1|AF439829_1 AT4g24050/T19F6_40 [Arabidopsis thaliana] gi|2262111|gb|AAB63619.1| ribitol dehydrogenase isolog [Arabidopsis thaliana] gi|5668633|emb|CAB51648.1| putative protein [Arabidopsis thaliana] gi|7269254|emb|CAB81323.1| putative protein [Arabidopsis thaliana] gi|21928085|gb|AAM78071.1| AT4g24050/T19F6_40 [Arabidopsis thaliana] gi|332659445|gb|AEE84845.1| Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana]

 Score =  522 bits (1344), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 248/333 (74%), Positives = 294/333 (88%), Gaps = 1/333 (0%)

Query: 1   MLETVKYLLGSAGASGYGSKSTAEQVTDGCPNLSSVTAIITGATSGIGAETARVLAKRGA 60
           M+ET KYLLG+AGASG+GSKSTAE+VT+ C +L S+TA+ITGATSGIGAETARVLAKRGA
Sbjct: 1   MIETGKYLLGAAGASGFGSKSTAEEVTENC-DLRSITAVITGATSGIGAETARVLAKRGA 59

Query: 61  RLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLPLNLLIN 120
           RL+ PAR++KAAEEAK R+ S+ P ++IVV+ LDLSS++SVRNFV+ F SL+LPLNLLIN
Sbjct: 60  RLIFPARNVKAAEEAKERIVSEFPETEIVVMKLDLSSIASVRNFVADFESLDLPLNLLIN 119

Query: 121 NAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHS 180
           NAGK AH+HAISEDGIEMTFATNYLGHFLLT LLL KMI+TA+ TG+QGRIVNV+S IH 
Sbjct: 120 NAGKLAHEHAISEDGIEMTFATNYLGHFLLTNLLLNKMIQTAEETGVQGRIVNVTSGIHG 179

Query: 181 WFSGDMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGI 240
           WFSGD+I YL  IS+ K  +DATRAYALSKLANVLHTKEL+ RL+++ ANVTVNCVHPG+
Sbjct: 180 WFSGDLIEYLRLISQPKCQFDATRAYALSKLANVLHTKELSSRLQKIGANVTVNCVHPGV 239

Query: 241 VRTRLTREREGFITDLVFFLTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWT 300
           VRTRLTR+REG +TDLVFFL SKL+KT+PQ AATTCYVA +PRLVNVSGKYF DCNE   
Sbjct: 240 VRTRLTRDREGLLTDLVFFLASKLVKTVPQAAATTCYVATNPRLVNVSGKYFTDCNETTP 299

Query: 301 SKLGSNSNEASRLWAASELLVSRDPKSVFDPLS 333
           S LG+NS+EA++LWAASE+LV++  K+ FDP S
Sbjct: 300 SGLGTNSSEATKLWAASEILVTQHSKTSFDPCS 332

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224072256|ref|XP_002303676.1| predicted protein [Populus trichocarpa] gi|222841108|gb|EEE78655.1| predicted protein [Populus trichocarpa]

 Score =  495 bits (1275), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 264/322 (81%), Positives = 293/322 (90%), Gaps = 1/322 (0%)

Query: 1   MLETVKYLLGSAGASGYGSKSTAEQVTDGCPNLSSVTAIITGATSGIGAETARVLAKRGA 60
           M ET+KYL+GSAGASGYGSKSTAEQVT+ C +L S+TAIITGATSGIGAETARVLAKRGA
Sbjct: 1   MFETLKYLVGSAGASGYGSKSTAEQVTENCCDLHSITAIITGATSGIGAETARVLAKRGA 60

Query: 61  RLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLPLNLLIN 120
           RLVLPAR+LK AE+AKAR+ S+ P +DI+V+ LDLSSL+SVRNFVS+F SLNLPLNLLIN
Sbjct: 61  RLVLPARNLKGAEDAKARILSENPDADIIVMGLDLSSLNSVRNFVSEFESLNLPLNLLIN 120

Query: 121 NAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHS 180
           NAG+FA + AISEDGIEMTFATNYLGHFLLTKLLLKKMIETAK T +QGRIVNVSSSI++
Sbjct: 121 NAGRFALEPAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKTTSLQGRIVNVSSSIYN 180

Query: 181 WFSGDMIRYLGQISRNK-SHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPG 239
           WFSGDMIRYL +ISRNK   +D TRAYALSKLA VLHTKE+AQRLKQMEANVTVNCVHPG
Sbjct: 181 WFSGDMIRYLCEISRNKLCDFDPTRAYALSKLAIVLHTKEVAQRLKQMEANVTVNCVHPG 240

Query: 240 IVRTRLTREREGFITDLVFFLTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAW 299
           +VRTRLTREREG  TD+ FFLTSKLLKTIPQ AATTCYVA HP LVNV+GKYF+DCNEA 
Sbjct: 241 VVRTRLTREREGMATDIAFFLTSKLLKTIPQAAATTCYVATHPTLVNVTGKYFSDCNEAS 300

Query: 300 TSKLGSNSNEASRLWAASELLV 321
           TSKLGSNS EA+RLW ASE++V
Sbjct: 301 TSKLGSNSTEAARLWTASEIMV 322

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449452414|ref|XP_004143954.1| PREDICTED: short-chain dehydrogenase TIC 32, chloroplastic-like [Cucumis sativus] gi|449519651|ref|XP_004166848.1| PREDICTED: short-chain dehydrogenase TIC 32, chloroplastic-like [Cucumis sativus]

 Score =  480 bits (1236), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 252/334 (75%), Positives = 292/334 (87%), Gaps = 2/334 (0%)

Query: 1   MLETVKYLLGSAGASGYGSKSTAEQVTDGCPNLSSVTAIITGATSGIGAETARVLAKRGA 60
           ML +  YL GS G SG+GSKSTAE VT   P   S TAIITGATSGIGAETAR+LAKRGA
Sbjct: 1   MLLSFNYLSGSPGPSGFGSKSTAEHVTASLP--PSFTAIITGATSGIGAETARILAKRGA 58

Query: 61  RLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLPLNLLIN 120
           RL+LP+R++KAAEE KAR+ S+C  S+I+V+ LDLSSLSSVR FVSQF SLNLPLNLLIN
Sbjct: 59  RLILPSRNIKAAEETKARIESECSDSEIIVMSLDLSSLSSVRTFVSQFESLNLPLNLLIN 118

Query: 121 NAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHS 180
           NAGKF+H+HAI+EDGIEMTFATNYLGHFLLTKLL+ KM+ETAK TG++GRIVNVSSSIH 
Sbjct: 119 NAGKFSHEHAITEDGIEMTFATNYLGHFLLTKLLVNKMVETAKVTGVEGRIVNVSSSIHG 178

Query: 181 WFSGDMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGI 240
           WFSGD+++YLGQISRNK +YDATRAYALSKLANVLHT ELA+R KQM ANVTVNCVHPGI
Sbjct: 179 WFSGDILKYLGQISRNKRNYDATRAYALSKLANVLHTHELARRFKQMGANVTVNCVHPGI 238

Query: 241 VRTRLTREREGFITDLVFFLTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWT 300
           VRTRLTR+REGFITDLVFF+ SKLLKTIPQ AATTCYVA +PRL +V+GKYF DCNE+  
Sbjct: 239 VRTRLTRDREGFITDLVFFMASKLLKTIPQAAATTCYVATNPRLRHVTGKYFVDCNESSP 298

Query: 301 SKLGSNSNEASRLWAASELLVSRDPKSVFDPLSA 334
           SKL  + +EA+RLW+ASE++V+ + K +FDP +A
Sbjct: 299 SKLAGSPSEAARLWSASEIMVNANSKLLFDPNNA 332

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|242091816|ref|XP_002436398.1| hypothetical protein SORBIDRAFT_10g001800 [Sorghum bicolor] gi|241914621|gb|EER87765.1| hypothetical protein SORBIDRAFT_10g001800 [Sorghum bicolor]

 Score =  461 bits (1187), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 227/320 (70%), Positives = 270/320 (84%), Gaps = 2/320 (0%)

Query: 1   MLETVKYLLGSAGASGYGSKSTAEQVTDGCPNLSSVTAIITGATSGIGAETARVLAKRGA 60
           ML +++YL G+AG SG+GS++TAE+ T    +L+ +TAIITGATSGIGAETARVLA RGA
Sbjct: 1   MLTSLRYLAGTAGPSGFGSRTTAEEATAAGRDLAHITAIITGATSGIGAETARVLASRGA 60

Query: 61  RLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLPLNLLIN 120
           RLVLPARSLKAAEEA+AR+ +DCPG+D+ VLPLDLSSL+SVR FV +F  L LPLNLL+N
Sbjct: 61  RLVLPARSLKAAEEARARVRADCPGADVTVLPLDLSSLASVRRFVKRFLHLGLPLNLLVN 120

Query: 121 NAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHS 180
           NAGK+A + A+SEDG+EMTFATNYLGHFLLT+LLL KM ETA+ TG++GRIVNVSS+IHS
Sbjct: 121 NAGKYADRFAVSEDGVEMTFATNYLGHFLLTRLLLDKMAETARDTGVEGRIVNVSSTIHS 180

Query: 181 WFSG--DMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHP 238
           WF    D + YL +++R K  YD T+AYALSKLANVLHT+ LA RLK+M ANVT NCVHP
Sbjct: 181 WFPADDDALAYLDRVTRRKIQYDPTKAYALSKLANVLHTRALADRLKEMGANVTANCVHP 240

Query: 239 GIVRTRLTREREGFITDLVFFLTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEA 298
           GIVRTRL R+R+G IT+ VFFL SKLLKTIPQ AATTCYVA+HP +  VSGKYFADCNEA
Sbjct: 241 GIVRTRLIRDRDGLITNTVFFLASKLLKTIPQAAATTCYVAVHPAVAGVSGKYFADCNEA 300

Query: 299 WTSKLGSNSNEASRLWAASE 318
             S+LG++S EASRLW  SE
Sbjct: 301 SPSRLGASSEEASRLWTFSE 320

Source: Sorghum bicolor

Species: Sorghum bicolor

Genus: Sorghum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	336
TAIR|locus:2134971	332	AT4G24050 [Arabidopsis thalian	0.988	1.0	0.594	5.6e-100
TAIR|locus:2019474	334	AT1G64590 [Arabidopsis thalian	0.964	0.970	0.594	2.3e-94
TAIR|locus:2170071	339	AT5G50130 [Arabidopsis thalian	0.886	0.879	0.453	2.7e-59
TAIR|locus:2181778	331	AT5G02540 [Arabidopsis thalian	0.883	0.897	0.405	7.2e-52
TAIR|locus:2040676	321	AT2G37540 [Arabidopsis thalian	0.880	0.922	0.403	1.1e-50
TAIR|locus:2117969	322	Tic32-IVa "translocon at the i	0.880	0.919	0.374	5.4e-47
TAIR|locus:2123066	317	AT4G11410 [Arabidopsis thalian	0.889	0.943	0.359	1.7e-43
UNIPROTKB|F1SA23	316	RDH12 "Uncharacterized protein	0.815	0.867	0.356	6.5e-35
UNIPROTKB|F1MD39	316	RDH12 "Retinol dehydrogenase 1	0.797	0.848	0.367	5.8e-34
UNIPROTKB|P59837	316	RDH12 "Retinol dehydrogenase 1	0.797	0.848	0.367	5.8e-34

TAIR|locus:2134971 AT4G24050 [Arabidopsis thaliana (taxid:3702)]

 Score = 992 (354.3 bits), Expect = 5.6e-100, P = 5.6e-100
 Identities = 198/333 (59%), Positives = 235/333 (70%)

Query:     1 MLETVKXXXXXXXXXXXXXXXTAEQVTDGCPNLSSVTAIITGATSGIGAETARVLAKRGA 60
             M+ET K               TAE+VT+ C +L S+TA+ITGATSGIGAETARVLAKRGA
Sbjct:     1 MIETGKYLLGAAGASGFGSKSTAEEVTENC-DLRSITAVITGATSGIGAETARVLAKRGA 59

Query:    61 RLVLPXXXXXXXXXXXXXXXXDCPGSDIXXXXXXXXXXXXXRNFVSQFHSXXXXXXXXXX 120
             RL+ P                + P ++I             RNFV+ F S          
Sbjct:    60 RLIFPARNVKAAEEAKERIVSEFPETEIVVMKLDLSSIASVRNFVADFESLDLPLNLLIN 119

Query:   121 XAGKFAHQHAISEDGIEMTFATNYLGHFXXXXXXXXXMIETAKATGIQGRIVNVSSSIHS 180
              AGK AH+HAISEDGIEMTFATNYLGHF         MI+TA+ TG+QGRIVNV+S IH 
Sbjct:   120 NAGKLAHEHAISEDGIEMTFATNYLGHFLLTNLLLNKMIQTAEETGVQGRIVNVTSGIHG 179

Query:   181 WFSGDMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGI 240
             WFSGD+I YL  IS+ K  +DATRAYALSKLANVLHTKEL+ RL+++ ANVTVNCVHPG+
Sbjct:   180 WFSGDLIEYLRLISQPKCQFDATRAYALSKLANVLHTKELSSRLQKIGANVTVNCVHPGV 239

Query:   241 VRTRLTREREGFITDLVFFLTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWT 300
             VRTRLTR+REG +TDLVFFL SKL+KT+PQ AATTCYVA +PRLVNVSGKYF DCNE   
Sbjct:   240 VRTRLTRDREGLLTDLVFFLASKLVKTVPQAAATTCYVATNPRLVNVSGKYFTDCNETTP 299

Query:   301 SKLGSNSNEASRLWAASELLVSRDPKSVFDPLS 333
             S LG+NS+EA++LWAASE+LV++  K+ FDP S
Sbjct:   300 SGLGTNSSEATKLWAASEILVTQHSKTSFDPCS 332

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

TAIR|locus:2019474 AT1G64590 [Arabidopsis thaliana (taxid:3702)]

 Score = 939 (335.6 bits), Expect = 2.3e-94, P = 2.3e-94
 Identities = 195/328 (59%), Positives = 226/328 (68%)

Query:     1 MLETVKXXXXXXXXXXXXXXXTAEQVTDGC-PNLSSVTAIITGATSGIGAETARVLAKRG 59
             M+ETVK               TA+ VT  C  +L S+TAIITGATSGIGAETARVLAKRG
Sbjct:     1 MIETVKHLIGSGGPSGFGSRSTADHVT--CNSDLRSLTAIITGATSGIGAETARVLAKRG 58

Query:    60 ARLVLPXXXXXXXXXXXXXXXXDCPGSDIXXXXXXXXXXXXXRNFVSQFHSXXXXXXXXX 119
             ARLVLP                + P ++I             R FV  F S         
Sbjct:    59 ARLVLPARSVKTAEETKARILSEFPDAEIIVMHLDLSSLTSVRRFVDDFESLNLPLNILI 118

Query:   120 XXAGKFAHQHAISEDGIEMTFATNYLGHFXXXXXXXXXMIETAKATGIQGRIVNVSSSIH 179
               AGK+AH+HA+SEDG+EMTFATNYLGHF         MIETA  TG+QGRIVNV+S +H
Sbjct:   119 NNAGKYAHKHALSEDGVEMTFATNYLGHFLLTKLLLKKMIETAAQTGVQGRIVNVTSVVH 178

Query:   180 SWFSGDMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPG 239
             SWFSGDM++YL  ISRN  +YDATRAYALSKLANVLHT EL++ L +M+ANVT NCVHPG
Sbjct:   179 SWFSGDMLQYLADISRNNRNYDATRAYALSKLANVLHTVELSRLLHKMDANVTANCVHPG 238

Query:   240 IVRTRLTREREGFITDLVFFLTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAW 299
             IV+TRLTR+REG +TDLVFFLTSKLLK++PQ AATTCYVA  PRL NV GKYF+DCNEA 
Sbjct:   239 IVKTRLTRDREGVVTDLVFFLTSKLLKSVPQAAATTCYVATSPRLRNVCGKYFSDCNEAR 298

Query:   300 TSKLGSNSNEASRLWAASELLVSRDPKS 327
             +SK GS + +A RLW AS+LLVS  P S
Sbjct:   299 SSKSGSCNLKAQRLWTASDLLVS-PPNS 325

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

TAIR|locus:2170071 AT5G50130 [Arabidopsis thaliana (taxid:3702)]

 Score = 608 (219.1 bits), Expect = 2.7e-59, P = 2.7e-59
 Identities = 137/302 (45%), Positives = 175/302 (57%)

Query:    22 TAEQVTDGC--PNLSSVTAIITGATSGIGAETARVLAKRGARLVLPXXXXXXXXXXXXXX 79
             TAEQVT     P  S +TAIITG TSGIGAETARVLAKRG R+V+               
Sbjct:    22 TAEQVTQHSFFP-CSHLTAIITGGTSGIGAETARVLAKRGVRVVMAVRDMKKAEMVKERI 80

Query:    80 XXDCPGSDIXXXXXXXXXXXXXRNFVSQFHSXXXXXXXXXXXAGKFAHQHAISEDGIEMT 139
               + P +DI               F SQF S           AG F+     SE+ IE+T
Sbjct:    81 IRENPEADIILFEIDLSSLSSVARFCSQFLSQDLPLNILINNAGVFSPNLEFSEEKIELT 140

Query:   140 FATNYLGHFXXXXXXXXXMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSH 199
             FATN+LGH+         MI+TA+ +GI+GRI+N+SS IH+W   D   +  ++    S 
Sbjct:   141 FATNFLGHYLLTEMLIEKMIDTAEKSGIEGRIINLSSVIHNWVKPDCFSF-PKLLHPISR 199

Query:   200 YDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFF 259
             Y+ TRAYA SKLA +LH K L+++LK   ANVT+N VHPGIV+T + R  +G  TD +F 
Sbjct:   200 YNGTRAYAQSKLATILHAKALSKQLKDRNANVTINAVHPGIVKTGIIRAHKGLFTDSLFL 259

Query:   260 LTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWTSKLGSNSNEASRLWAASEL 319
             + SKLLK+I QGAATTCYVA+      +SGKYFADCNE   S L ++   A +L   S  
Sbjct:   260 IASKLLKSISQGAATTCYVALSNETKGLSGKYFADCNETNCSDLANDEYVALKLCTQSRA 319

Query:   320 LV 321
             L+
Sbjct:   320 LI 321

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

TAIR|locus:2181778 AT5G02540 [Arabidopsis thaliana (taxid:3702)]

 Score = 538 (194.4 bits), Expect = 7.2e-52, P = 7.2e-52
 Identities = 122/301 (40%), Positives = 169/301 (56%)

Query:    22 TAEQVTDGCPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPXXXXXXXXXXXXXXXX 81
             TAE+VT G  + +++TAIITG T GIG ETARVL+KRGA +V+                 
Sbjct:    21 TAEEVTQGI-DATNLTAIITGGTGGIGMETARVLSKRGAHVVIGARNMGAAENAKTEILR 79

Query:    82 DCPGSDIXXXXXXXXXXXXXRNFVSQFHSXXXXXXXXXXXAGKFAHQHAISEDGIEMTFA 141
                 + +             + FV +FH+           AG     + +SEDGIE+ FA
Sbjct:    80 QNANARVTLLQLDLSSIKSIKAFVREFHALHLPLNLLINNAGVMFCPYQLSEDGIELQFA 139

Query:   142 TNYLGHFXXXXXXXXXMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYD 201
             TN++GHF         M  TAK +G++GRI+NVSS  H +   + I++   I+   S+ D
Sbjct:   140 TNHIGHFLLTNLLLDTMKNTAKTSGVEGRILNVSSVAHIYTYQEGIQF-DSINDICSYSD 198

Query:   202 ATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLT 261
               RAY  SKLAN+LH  EL+++L++   N+T N VHPG++ T L +     +  L FF +
Sbjct:   199 K-RAYGQSKLANILHANELSRQLQEEGVNITANSVHPGLILTNLFQHTALLMRFLKFF-S 256

Query:   262 SKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWTSKLGSNSNEASRLWAASELLV 321
               L K IPQGAATTCYVA+HP +  V+GKYFADCNE   SKL  +   A +LW  S  L+
Sbjct:   257 FYLWKNIPQGAATTCYVALHPSVKGVTGKYFADCNEVTPSKLARDETLAQKLWDFSVKLI 316

Query:   322 S 322
             +
Sbjct:   317 N 317

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

TAIR|locus:2040676 AT2G37540 [Arabidopsis thaliana (taxid:3702)]

 Score = 527 (190.6 bits), Expect = 1.1e-50, P = 1.1e-50
 Identities = 121/300 (40%), Positives = 165/300 (55%)

Query:    22 TAEQVTDGCPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPXXXXXXXXXXXXXXXX 81
             TAE VT    + S +TAIITG TSGIG E ARVLA RGA +++                 
Sbjct:    21 TAEDVTQAI-DASHLTAIITGGTSGIGLEAARVLAMRGAHVIIAARNPKAANESKEMILQ 79

Query:    82 DCPGSDIXXXXXXXXXXXXXRNFVSQFHSXXXXXXXXXXXAGKFAHQHAISEDGIEMTFA 141
               P + +             R+FV QF +           AG       ++EDGIE  FA
Sbjct:    80 MNPNARVDYLQIDVSSIKSVRSFVDQFLALNVPLNILINNAGVMFCPFKLTEDGIESQFA 139

Query:   142 TNYLGHFXXXXXXXXXMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYD 201
             TN++GHF         M  TA+ +G+QGRIVN+SS  H++   + I++ G I+ + + Y 
Sbjct:   140 TNHIGHFLLTNLLLDKMKSTARESGVQGRIVNLSSIAHTYTYSEGIKFQG-IN-DPAGYS 197

Query:   202 ATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLT 261
               RAY  SKL+N+LH+  L++RL++   N+T+N VHPG+V T L R   GF   +   +T
Sbjct:   198 ERRAYGQSKLSNLLHSNALSRRLQEEGVNITINSVHPGLVTTNLFRY-SGFSMKVFRAMT 256

Query:   262 SKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWTSKLGSNSNEASRLWAASELLV 321
                 K IPQGAATTCYVA+HP L  V+GKYF DCN    SK  +N++ A +LW  S  L+
Sbjct:   257 FLFWKNIPQGAATTCYVALHPDLEGVTGKYFGDCNIVAPSKFATNNSLADKLWDFSVFLI 316

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0009860 "pollen tube growth" evidence=IEP

TAIR|locus:2117969 Tic32-IVa "translocon at the inner envelope membrane of chloroplasts 32-IVa" [Arabidopsis thaliana (taxid:3702)]

 Score = 492 (178.3 bits), Expect = 5.4e-47, P = 5.4e-47
 Identities = 112/299 (37%), Positives = 162/299 (54%)

Query:    22 TAEQVTDGCPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPXXXXXXXXXXXXXXXX 81
             TAE+VT G    + +TAI+TGA+SGIG ETARVL+ RG  +V+                 
Sbjct:    17 TAEEVTHGVDG-TGLTAIVTGASSGIGVETARVLSLRGVHVVMAVRNTDSGAKVKEDIVK 75

Query:    82 DCPGSDIXXXXXXXXXXXXXRNFVSQFHSXXXXXXXXXXXAGKFAHQHAISEDGIEMTFA 141
               PG+ +             R F S++ S           AG  A    +S+D IE+ FA
Sbjct:    76 QVPGAKLDVMELDLSSMQSVRKFASEYKSTGLPLNLLINNAGIMACPFMLSKDNIELQFA 135

Query:   142 TNYLGHFXXXXXXXXXMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYD 201
             TN+LGHF         M  T++ +  +GRIVN+SS  H +   + +R+  +I+ +KS Y 
Sbjct:   136 TNHLGHFLLTKLLLDTMKSTSRESKREGRIVNLSSEAHRFSYPEGVRF-DKIN-DKSSYS 193

Query:   202 ATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLT 261
             + RAY  SKL NVLH  EL ++LK+   N+T N +HPG + T L R    ++   V  + 
Sbjct:   194 SMRAYGQSKLCNVLHANELTKQLKEDGVNITANSLHPGAIMTNLGRYFNPYLAVAVGAVA 253

Query:   262 SKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWTSKLGSNSNEASRLWAASELL 320
               +LK++PQGAATTCYVA++P++  VSG+YF D N A    L  ++  A ++W  S  L
Sbjct:   254 KYILKSVPQGAATTCYVALNPQVAGVSGEYFQDSNIAKPLPLVKDTELAKKVWDFSTKL 312

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0009706 "chloroplast inner membrane" evidence=IDA

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0009507 "chloroplast" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

TAIR|locus:2123066 AT4G11410 [Arabidopsis thaliana (taxid:3702)]

 Score = 459 (166.6 bits), Expect = 1.7e-43, P = 1.7e-43
 Identities = 109/303 (35%), Positives = 158/303 (52%)

Query:    22 TAEQVTDGCPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPXXXXXXXXXXXXXXXX 81
             TAE+VT G    + +TAI+TGA+SGIG ET RVLA RG  +V+                 
Sbjct:    17 TAEEVTHGIDG-TGLTAIVTGASSGIGEETTRVLALRGVHVVMAVRNTDSGNQVRDKILK 75

Query:    82 DCPGSDIXXXXXXXXXXXXXRNFVSQFHSXXXXXXXXXXXAGKFAHQHAISEDGIEMTFA 141
             + P + I             R+F S++ S           AG  A    +S D IE+ FA
Sbjct:    76 EIPQAKIDVMKLDLSSMASVRSFASEYQSLDLPLNLLINNAGIMACPFLLSSDNIELQFA 135

Query:   142 TNYLGHFXXXXXXXXXMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYD 201
             TN+LGHF         M +TA  +  +GRIV VSS  H +   + +++  +I+ +++ Y+
Sbjct:   136 TNHLGHFLLTNLLLERMKKTASESNREGRIVIVSSEGHRFAYREGVQF-DKIN-DEARYN 193

Query:   202 ATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLT 261
               +AY  SKL N+LH  ELA+  K+   N+T N +HPG + T L R    FI  +   + 
Sbjct:   194 TLQAYGQSKLGNILHATELARLFKEQGVNITANSLHPGSIMTNLLRYHS-FINTIGNAVG 252

Query:   262 SKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWTSKLGSNSNEASRLWAASELLV 321
               +LK+IPQGAATTCY A+HP+   VSG+Y  D N +  +  G + + A +LW  S  L 
Sbjct:   253 KYVLKSIPQGAATTCYAALHPQAKGVSGEYLMDNNISDPNSQGKDKDLAKKLWEFSLRLT 312

Query:   322 SRD 324
               +
Sbjct:   313 GEE 315

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

UNIPROTKB|F1SA23 RDH12 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 378 (138.1 bits), Expect = 6.5e-35, P = 6.5e-35
 Identities = 103/289 (35%), Positives = 141/289 (48%)

Query:    33 LSSVTAIITGATSGIGAETARVLAKRGARLVLPXXXXXXXXXXXXXXXXDCPGSDIXXXX 92
             L     +ITGA +GIG ETAR LA+RGAR+ +                 D   S +    
Sbjct:    37 LPGKVVVITGANTGIGKETARELARRGARVYIACRDVLKGESAASEIRADTKNSQVLVRK 96

Query:    93 XXXXXXXXXRNFVSQFHSXXXXXXXXXXXAGKFAHQHAISEDGIEMTFATNYLGHFXXXX 152
                      R F   F +           AG     ++ + DG E     N+LGHF    
Sbjct:    97 LDLSDTKSIRAFAEGFLTEEKQLHILINNAGVMLCPYSKTADGFETHLGVNHLGHFLLTH 156

Query:   153 XXXXXMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLA 212
                  ++E  KA+    R+VN+SS +H   +G  IR+     + + HY+   AY  SKLA
Sbjct:   157 L----LLEQLKASA-PARVVNLSSVVHH--AGK-IRF--HDLQGEKHYNRGFAYCHSKLA 206

Query:   213 NVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSKLLKTIPQGA 272
             NVL T+ELA+RL+     VT   VHPGIV++ L R    F+  L++ L S+ LKT  +GA
Sbjct:   207 NVLFTRELAKRLQG--TGVTTYAVHPGIVQSELVRH--SFLLCLLWRLFSRFLKTAREGA 262

Query:   273 ATTCYVAIHPRLVNVSGKYFADCNEAWTSKLGSNSNEASRLWAAS-ELL 320
              T+ + A+   L  +SGKYF+DC  AW S    N+  A RLW  S ELL
Sbjct:   263 QTSLHCALAEGLEPLSGKYFSDCKRAWVSPRARNNKTAERLWNVSCELL 311

GO:0042572 "retinol metabolic process" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0004745 "retinol dehydrogenase activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|F1MD39 RDH12 "Retinol dehydrogenase 12" [Bos taurus (taxid:9913)]

 Score = 369 (135.0 bits), Expect = 5.8e-34, P = 5.8e-34
 Identities = 104/283 (36%), Positives = 139/283 (49%)

Query:    39 IITGATSGIGAETARVLAKRGARLVLPXXXXXXXXXXXXXXXXDCPGSDIXXXXXXXXXX 98
             +ITGA +GIG ETAR LA+RGAR+ +                 D   S +          
Sbjct:    43 VITGANTGIGKETARELARRGARVYIACRDVLKGESAASEIQADTKNSQVLVRKLDLSDT 102

Query:    99 XXXRNFVSQFHSXXXXXXXXXXXAGKFAHQHAISEDGIEMTFATNYLGHFXXXXXXXXXM 158
                R F   F +           AG     ++ + DG E   A N+LGHF         +
Sbjct:   103 KSIRAFAEGFLAEEKQLHILINNAGVMLCPYSKTADGFETHLAVNHLGHFLLTHLLLGRL 162

Query:   159 IETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLANVLHTK 218
              E+A A     R+VN+SS  H    G  IR+   +  +K +Y+   AY  SKLANVL T+
Sbjct:   163 KESAPA-----RVVNLSSVAHHL--GK-IRF-HDLQGDK-YYNLGFAYCHSKLANVLFTR 212

Query:   219 ELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSKLLKTIPQGAATTCYV 278
             ELA+RLK     VT   VHPGIVR++L R    F+  L++ L S  LKT  +GA T+ + 
Sbjct:   213 ELAKRLKG--TGVTTYAVHPGIVRSKLVRH--SFLLCLLWRLFSPFLKTTWEGAQTSLHC 268

Query:   279 AIHPRLVNVSGKYFADCNEAWTSKLGSNSNEASRLWAAS-ELL 320
             A+   L  +SGKYF+DC + W S    N+  A RLW  S ELL
Sbjct:   269 ALAEGLEPLSGKYFSDCKKTWVSPRARNNKTAERLWNVSCELL 311

GO:0042572 "retinol metabolic process" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0004745 "retinol dehydrogenase activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|P59837 RDH12 "Retinol dehydrogenase 12" [Bos taurus (taxid:9913)]

 Score = 369 (135.0 bits), Expect = 5.8e-34, P = 5.8e-34
 Identities = 104/283 (36%), Positives = 139/283 (49%)

Query:    39 IITGATSGIGAETARVLAKRGARLVLPXXXXXXXXXXXXXXXXDCPGSDIXXXXXXXXXX 98
             +ITGA +GIG ETAR LA+RGAR+ +                 D   S +          
Sbjct:    43 VITGANTGIGKETARELARRGARVYIACRDVLKGESAASEIQADTKNSQVLVRKLDLSDT 102

Query:    99 XXXRNFVSQFHSXXXXXXXXXXXAGKFAHQHAISEDGIEMTFATNYLGHFXXXXXXXXXM 158
                R F   F +           AG     ++ + DG E   A N+LGHF         +
Sbjct:   103 KSIRAFAEGFLAEEKQLHILINNAGVMLCPYSKTADGFETHLAVNHLGHFLLTHLLLGRL 162

Query:   159 IETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLANVLHTK 218
              E+A A     R+VN+SS  H    G  IR+   +  +K +Y+   AY  SKLANVL T+
Sbjct:   163 KESAPA-----RVVNLSSVAHHL--GK-IRF-HDLQGDK-YYNLGFAYCHSKLANVLFTR 212

Query:   219 ELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSKLLKTIPQGAATTCYV 278
             ELA+RLK     VT   VHPGIVR++L R    F+  L++ L S  LKT  +GA T+ + 
Sbjct:   213 ELAKRLKG--TGVTTYAVHPGIVRSKLVRH--SFLLCLLWRLFSPFLKTTWEGAQTSLHC 268

Query:   279 AIHPRLVNVSGKYFADCNEAWTSKLGSNSNEASRLWAAS-ELL 320
             A+   L  +SGKYF+DC + W S    N+  A RLW  S ELL
Sbjct:   269 ALAEGLEPLSGKYFSDCKKTWVSPRARNNKTAERLWNVSCELL 311

GO:0042572 "retinol metabolic process" evidence=ISS

GO:0004745 "retinol dehydrogenase activity" evidence=ISS

GO:0005622 "intracellular" evidence=ISS

GO:0050896 "response to stimulus" evidence=IEA

GO:0007601 "visual perception" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	1.1.1	LOW CONFIDENCE prediction!
3rd Layer	1.3.1.38	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	336
cd05327	269	cd05327, retinol-DH_like_SDR_c_like, retinol dehyd	9e-92
cd09807	274	cd09807, retinol-DH_like_SDR_c, retinol dehydrogen	5e-75
PRK06196	315	PRK06196, PRK06196, oxidoreductase; Provisional	1e-60
cd09809	284	cd09809, human_WWOX_like_SDR_c-like, human WWOX (W	9e-59
PRK06197	306	PRK06197, PRK06197, short chain dehydrogenase; Pro	1e-58
cd09810	311	cd09810, LPOR_like_SDR_c_like, light-dependent pro	1e-44
cd05233	234	cd05233, SDR_c, classical (c) SDRs	8e-42
COG1028	251	COG1028, FabG, Dehydrogenases with different speci	2e-38
PRK05653	246	PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein)	8e-38
cd05324	225	cd05324, carb_red_PTCR-like_SDR_c, Porcine testicu	5e-36
PRK05854	313	PRK05854, PRK05854, short chain dehydrogenase; Pro	3e-33
PRK07453	322	PRK07453, PRK07453, protochlorophyllide oxidoreduc	9e-32
COG0300	265	COG0300, DltE, Short-chain dehydrogenases of vario	2e-31
PLN00015	308	PLN00015, PLN00015, protochlorophyllide reductase	2e-31
TIGR01289	314	TIGR01289, LPOR, light-dependent protochlorophylli	1e-30
PRK12826	251	PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-prote	5e-28
cd05333	240	cd05333, BKR_SDR_c, beta-Keto acyl carrier protein	6e-28
cd09808	255	cd09808, DHRS-12_like_SDR_c-like, human dehydrogen	3e-27
PRK05565	247	PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein)	5e-27
PRK12825	249	PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-26
cd05332	257	cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxyste	1e-25
cd05346	249	cd05346, SDR_c5, classical (c) SDR, subgroup 5	2e-24
TIGR01830	239	TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier	3e-24
PRK07231	251	PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein)	4e-24
PRK05557	248	PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-23
PRK06949	258	PRK06949, PRK06949, short chain dehydrogenase; Pro	3e-23
cd05374	248	cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxyster	6e-23
cd05325	233	cd05325, carb_red_sniffer_like_SDR_c, carbonyl red	1e-22
PRK08226	263	PRK08226, PRK08226, short chain dehydrogenase; Pro	5e-22
cd05344	253	cd05344, BKR_like_SDR_like, putative beta-ketoacyl	1e-21
COG4221	246	COG4221, COG4221, Short-chain alcohol dehydrogenas	2e-21
cd08939	239	cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine	2e-21
cd08932	223	cd08932, HetN_like_SDR_c, HetN oxidoreductase-like	2e-21
pfam00106	167	pfam00106, adh_short, short chain dehydrogenase	4e-21
cd05362	243	cd05362, THN_reductase-like_SDR_c, tetrahydroxynap	4e-21
cd05339	243	cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hy	6e-21
PRK08213	259	PRK08213, PRK08213, gluconate 5-dehydrogenase; Pro	2e-20
cd05364	253	cd05364, SDR_c11, classical (c) SDR, subgroup 11	3e-20
cd05347	248	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogena	4e-20
cd05323	244	cd05323, ADH_SDR_c_like, insect type alcohol dehyd	6e-20
PRK12939	250	PRK12939, PRK12939, short chain dehydrogenase; Pro	8e-20
PRK07063	260	PRK07063, PRK07063, short chain dehydrogenase; Pro	4e-19
TIGR01963	255	TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase	5e-19
cd05370	228	cd05370, SDR_c2, classical (c) SDR, subgroup 2	5e-19
PRK12429	258	PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenas	7e-19
PRK12829	264	PRK12829, PRK12829, short chain dehydrogenase; Pro	8e-19
cd05351	244	cd05351, XR_like_SDR_c, xylulose reductase-like, c	9e-19
cd05367	241	cd05367, SPR-like_SDR_c, sepiapterin reductase (SP	1e-18
PRK06841	255	PRK06841, PRK06841, short chain dehydrogenase; Pro	6e-18
cd05358	253	cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (Glc	1e-17
cd08951	260	cd08951, DR_C-13_KR_SDR_c_like, daunorubicin C-13	2e-17
cd08930	250	cd08930, SDR_c8, classical (c) SDR, subgroup 8	4e-17
cd05326	249	cd05326, secoisolariciresinol-DH_like_SDR_c, secoi	5e-17
cd05343	250	cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, c	6e-17
PRK09072	263	PRK09072, PRK09072, short chain dehydrogenase; Pro	6e-17
PRK06181	263	PRK06181, PRK06181, short chain dehydrogenase; Pro	7e-17
PRK06500	249	PRK06500, PRK06500, short chain dehydrogenase; Pro	7e-17
PRK07825	273	PRK07825, PRK07825, short chain dehydrogenase; Pro	8e-17
PRK05866	293	PRK05866, PRK05866, short chain dehydrogenase; Pro	1e-16
cd05356	239	cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxyst	1e-16
PRK07326	237	PRK07326, PRK07326, short chain dehydrogenase; Pro	2e-16
PRK06914	280	PRK06914, PRK06914, short chain dehydrogenase; Pro	2e-16
cd05350	239	cd05350, SDR_c6, classical (c) SDR, subgroup 6	2e-16
PRK12745	256	PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-prote	2e-16
PRK07201	657	PRK07201, PRK07201, short chain dehydrogenase; Pro	3e-16
cd08940	258	cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydroge	3e-16
PRK07454	241	PRK07454, PRK07454, short chain dehydrogenase; Pro	2e-15
PRK12827	249	PRK12827, PRK12827, short chain dehydrogenase; Pro	2e-15
PRK07666	239	PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-15
PRK07067	257	PRK07067, PRK07067, sorbitol dehydrogenase; Provis	2e-15
cd05338	246	cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogena	2e-15
cd05355	270	cd05355, SDR_c1, classical (c) SDR, subgroup 1	3e-15
cd05366	257	cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol	6e-15
cd05368	241	cd05368, DHRS6_like_SDR_c, human DHRS6-like, class	6e-15
cd05329	251	cd05329, TR_SDR_c, tropinone reductase-I and II (T	8e-15
cd08945	258	cd08945, PKR_SDR_c, Polyketide ketoreductase, clas	1e-14
cd05341	247	cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta	1e-14
cd08942	250	cd08942, RhlG_SDR_c, RhlG and related beta-ketoacy	2e-14
PRK12828	239	PRK12828, PRK12828, short chain dehydrogenase; Pro	2e-14
cd05360	233	cd05360, SDR_c3, classical (c) SDR, subgroup 3	3e-14
PRK06138	252	PRK06138, PRK06138, short chain dehydrogenase; Pro	5e-14
cd08944	246	cd08944, SDR_c12, classical (c) SDR, subgroup 12	5e-14
cd08933	261	cd08933, RDH_SDR_c, retinal dehydrogenase-like, cl	6e-14
PRK08324	681	PRK08324, PRK08324, short chain dehydrogenase; Val	6e-14
PRK06179	270	PRK06179, PRK06179, short chain dehydrogenase; Pro	7e-14
PRK07109	334	PRK07109, PRK07109, short chain dehydrogenase; Pro	9e-14
cd08941	290	cd08941, 3KS_SDR_c, 3-keto steroid reductase, clas	9e-14
PRK06125	259	PRK06125, PRK06125, short chain dehydrogenase; Pro	1e-13
PRK07060	245	PRK07060, PRK07060, short chain dehydrogenase; Pro	1e-13
PRK09242	257	PRK09242, PRK09242, tropinone reductase; Provision	1e-13
cd05345	248	cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl	1e-13
PRK12936	245	PRK12936, PRK12936, 3-ketoacyl-(acyl-carrier-prote	1e-13
PRK09730	247	PRK09730, PRK09730, putative NAD(P)-binding oxidor	1e-13
PRK08264	238	PRK08264, PRK08264, short chain dehydrogenase; Val	1e-13
PRK06128	300	PRK06128, PRK06128, oxidoreductase; Provisional	1e-13
PRK06701	290	PRK06701, PRK06701, short chain dehydrogenase; Pro	2e-13
PRK12824	245	PRK12824, PRK12824, acetoacetyl-CoA reductase; Pro	2e-13
cd05352	252	cd05352, MDH-like_SDR_c, mannitol dehydrogenase (M	2e-13
PRK06182	273	PRK06182, PRK06182, short chain dehydrogenase; Val	2e-13
cd05369	249	cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reducta	3e-13
PRK12743	256	PRK12743, PRK12743, oxidoreductase; Provisional	3e-13
TIGR01829	242	TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reducta	5e-13
PRK06550	235	PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein)	6e-13
TIGR01500	256	TIGR01500, sepiapter_red, sepiapterin reductase	6e-13
PRK08220	252	PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehy	8e-13
COG3967	245	COG3967, DltE, Short-chain dehydrogenase involved	9e-13
PRK08589	272	PRK08589, PRK08589, short chain dehydrogenase; Val	1e-12
PRK08217	253	PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-12
cd05337	255	cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl	2e-12
cd08934	243	cd08934, CAD_SDR_c, clavulanic acid dehydrogenase	2e-12
cd05354	235	cd05354, SDR_c7, classical (c) SDR, subgroup 7	2e-12
cd08935	271	cd08935, mannonate_red_SDR_c, putative D-mannonate	2e-12
TIGR04316	250	TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxyben	2e-12
pfam08659	181	pfam08659, KR, KR domain	3e-12
PRK06123	248	PRK06123, PRK06123, short chain dehydrogenase; Pro	3e-12
PRK06484	520	PRK06484, PRK06484, short chain dehydrogenase; Val	4e-12
PRK08017	256	PRK08017, PRK08017, oxidoreductase; Provisional	5e-12
PRK06523	260	PRK06523, PRK06523, short chain dehydrogenase; Pro	5e-12
PRK08277	278	PRK08277, PRK08277, D-mannonate oxidoreductase; Pr	5e-12
TIGR01832	248	TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogena	8e-12
PRK07775	274	PRK07775, PRK07775, short chain dehydrogenase; Pro	1e-11
cd08929	226	cd08929, SDR_c4, classical (c) SDR, subgroup 4	1e-11
cd08943	250	cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate al	1e-11
PRK07478	254	PRK07478, PRK07478, short chain dehydrogenase; Pro	1e-11
cd05371	252	cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydr	2e-11
PRK07097	265	PRK07097, PRK07097, gluconate 5-dehydrogenase; Pro	3e-11
TIGR03206	250	TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxy	3e-11
PRK13394	262	PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenas	3e-11
PRK08085	254	PRK08085, PRK08085, gluconate 5-dehydrogenase; Pro	3e-11
cd05330	257	cd05330, cyclohexanol_reductase_SDR_c, cyclohexano	4e-11
PRK06172	253	PRK06172, PRK06172, short chain dehydrogenase; Pro	4e-11
cd05331	244	cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydroz	4e-11
PRK08261	450	PRK08261, fabG, 3-ketoacyl-(acyl-carrier-protein)	5e-11
PRK06198	260	PRK06198, PRK06198, short chain dehydrogenase; Pro	5e-11
PRK07832	272	PRK07832, PRK07832, short chain dehydrogenase; Pro	5e-11
PRK06139	330	PRK06139, PRK06139, short chain dehydrogenase; Pro	6e-11
PRK09291	257	PRK09291, PRK09291, short chain dehydrogenase; Pro	6e-11
PRK12935	247	PRK12935, PRK12935, acetoacetyl-CoA reductase; Pro	7e-11
PRK06077	252	PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein)	8e-11
PRK09135	249	PRK09135, PRK09135, pteridine reductase; Provision	8e-11
PRK12746	254	PRK12746, PRK12746, short chain dehydrogenase; Pro	1e-10
PRK05855	582	PRK05855, PRK05855, short chain dehydrogenase; Val	1e-10
PRK06194	287	PRK06194, PRK06194, hypothetical protein; Provisio	2e-10
cd05359	242	cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_c	2e-10
PRK08936	261	PRK08936, PRK08936, glucose-1-dehydrogenase; Provi	2e-10
PRK07774	250	PRK07774, PRK07774, short chain dehydrogenase; Pro	2e-10
PRK12748	256	PRK12748, PRK12748, 3-ketoacyl-(acyl-carrier-prote	2e-10
PRK06463	255	PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-10
PRK08251	248	PRK08251, PRK08251, short chain dehydrogenase; Pro	2e-10
PRK07523	255	PRK07523, PRK07523, gluconate 5-dehydrogenase; Pro	2e-10
TIGR02632	676	TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate	2e-10
PRK05993	277	PRK05993, PRK05993, short chain dehydrogenase; Pro	3e-10
PRK08219	227	PRK08219, PRK08219, short chain dehydrogenase; Pro	3e-10
PRK05867	253	PRK05867, PRK05867, short chain dehydrogenase; Pro	3e-10
cd05363	254	cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH),	4e-10
PRK05872	296	PRK05872, PRK05872, short chain dehydrogenase; Pro	5e-10
PRK07577	234	PRK07577, PRK07577, short chain dehydrogenase; Pro	5e-10
cd05349	246	cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl	5e-10
PRK08063	250	PRK08063, PRK08063, enoyl-(acyl carrier protein) r	7e-10
cd05357	234	cd05357, PR_SDR_c, pteridine reductase (PR), class	7e-10
PRK12937	245	PRK12937, PRK12937, short chain dehydrogenase; Pro	8e-10
PRK06935	258	PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrog	1e-09
PRK06180	277	PRK06180, PRK06180, short chain dehydrogenase; Pro	1e-09
PRK06484	520	PRK06484, PRK06484, short chain dehydrogenase; Val	2e-09
PRK07985	294	PRK07985, PRK07985, oxidoreductase; Provisional	2e-09
PRK07035	252	PRK07035, PRK07035, short chain dehydrogenase; Pro	2e-09
PRK06114	254	PRK06114, PRK06114, short chain dehydrogenase; Pro	2e-09
cd08928	248	cd08928, KR_fFAS_like_SDR_c_like, ketoacyl reducta	2e-09
PRK08945	247	PRK08945, PRK08945, putative oxoacyl-(acyl carrier	3e-09
smart00822	180	smart00822, PKS_KR, This enzymatic domain is part	3e-09
PRK06124	256	PRK06124, PRK06124, gluconate 5-dehydrogenase; Pro	3e-09
cd09761	242	cd09761, A3DFK9-like_SDR_c, Clostridium thermocell	3e-09
PRK07069	251	PRK07069, PRK07069, short chain dehydrogenase; Val	4e-09
PRK07062	265	PRK07062, PRK07062, short chain dehydrogenase; Pro	4e-09
cd05365	242	cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroi	5e-09
PRK07814	263	PRK07814, PRK07814, short chain dehydrogenase; Pro	6e-09
cd09806	258	cd09806, type1_17beta-HSD-like_SDR_c, human estrog	6e-09
PRK08267	260	PRK08267, PRK08267, short chain dehydrogenase; Pro	8e-09
PRK12384	259	PRK12384, PRK12384, sorbitol-6-phosphate dehydroge	8e-09
cd05274	375	cd05274, KR_FAS_SDR_x, ketoreductase (KR) and fatt	1e-08
cd08936	256	cd08936, CR_SDR_c, Porcine peroxisomal carbonyl re	1e-08
PRK06398	258	PRK06398, PRK06398, aldose dehydrogenase; Validate	2e-08
PRK09186	256	PRK09186, PRK09186, flagellin modification protein	2e-08
cd05353	250	cd05353, hydroxyacyl-CoA-like_DH_SDR_c-like, (3R)-	3e-08
cd08937	256	cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa	4e-08
PRK10538	248	PRK10538, PRK10538, malonic semialdehyde reductase	4e-08
PRK07792	306	PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein)	4e-08
PRK07102	243	PRK07102, PRK07102, short chain dehydrogenase; Pro	5e-08
PRK06482	276	PRK06482, PRK06482, short chain dehydrogenase; Pro	5e-08
PRK06947	248	PRK06947, PRK06947, glucose-1-dehydrogenase; Provi	5e-08
PRK08263	275	PRK08263, PRK08263, short chain dehydrogenase; Pro	8e-08
cd09763	265	cd09763, DHRS1-like_SDR_c, human dehydrogenase/red	1e-07
TIGR03971	265	TIGR03971, SDR_subfam_1, oxidoreductase, SDR famil	1e-07
TIGR02415	254	TIGR02415, 23BDH, acetoin reductases	1e-07
cd05328	250	cd05328, 3alpha_HSD_SDR_c, alpha hydroxysteroid de	1e-07
PRK07677	252	PRK07677, PRK07677, short chain dehydrogenase; Pro	1e-07
cd05334	221	cd05334, DHPR_SDR_c_like, dihydropteridine reducta	1e-07
PRK07074	257	PRK07074, PRK07074, short chain dehydrogenase; Pro	2e-07
PRK07890	258	PRK07890, PRK07890, short chain dehydrogenase; Pro	2e-07
PRK06200	263	PRK06200, PRK06200, 2,3-dihydroxy-2,3-dihydropheny	3e-07
cd05340	236	cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-li	3e-07
PRK06057	255	PRK06057, PRK06057, short chain dehydrogenase; Pro	3e-07
PRK07831	262	PRK07831, PRK07831, short chain dehydrogenase; Pro	3e-07
PRK08265	261	PRK08265, PRK08265, short chain dehydrogenase; Pro	4e-07
PRK12481	251	PRK12481, PRK12481, 2-deoxy-D-gluconate 3-dehydrog	4e-07
PRK07023	243	PRK07023, PRK07023, short chain dehydrogenase; Pro	4e-07
PRK07024	257	PRK07024, PRK07024, short chain dehydrogenase; Pro	4e-07
PRK08643	256	PRK08643, PRK08643, acetoin reductase; Validated	5e-07
PRK05650	270	PRK05650, PRK05650, short chain dehydrogenase; Pro	5e-07
PRK08278	273	PRK08278, PRK08278, short chain dehydrogenase; Pro	6e-07
cd09805	281	cd09805, type2_17beta_HSD-like_SDR_c, human 17beta	6e-07
PRK06113	255	PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydro	7e-07
PLN02253	280	PLN02253, PLN02253, xanthoxin dehydrogenase	1e-06
PRK12747	252	PRK12747, PRK12747, short chain dehydrogenase; Pro	1e-06
PRK12823	260	PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1	2e-06
cd05373	238	cd05373, SDR_c10, classical (c) SDR, subgroup 10	3e-06
cd08953	436	cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup	4e-06
PRK06924	251	PRK06924, PRK06924, short chain dehydrogenase; Pro	4e-06
cd11730	206	cd11730, Tthb094_like_SDR_c, Tthb094 and related p	6e-06
PRK07791	286	PRK07791, PRK07791, short chain dehydrogenase; Pro	7e-06
PRK05786	238	PRK05786, fabG, 3-ketoacyl-(acyl-carrier-protein)	8e-06
PRK08642	253	PRK08642, fabG, 3-ketoacyl-(acyl-carrier-protein)	9e-06
TIGR01831	239	TIGR01831, fabG_rel, 3-oxoacyl-(acyl-carrier-prote	1e-05
cd08955	376	cd08955, KR_2_FAS_SDR_x, beta-ketoacyl reductase (	2e-05
PRK05875	276	PRK05875, PRK05875, short chain dehydrogenase; Pro	2e-05
cd08931	227	cd08931, SDR_c9, classical (c) SDR, subgroup 9	2e-05
PRK07856	252	PRK07856, PRK07856, short chain dehydrogenase; Pro	3e-05
PRK08628	258	PRK08628, PRK08628, short chain dehydrogenase; Pro	3e-05
PRK08340	259	PRK08340, PRK08340, glucose-1-dehydrogenase; Provi	4e-05
PRK08993	253	PRK08993, PRK08993, 2-deoxy-D-gluconate 3-dehydrog	5e-05
PRK12938	246	PRK12938, PRK12938, acetyacetyl-CoA reductase; Pro	5e-05
PLN02780	320	PLN02780, PLN02780, ketoreductase/ oxidoreductase	5e-05
PRK07806	248	PRK07806, PRK07806, short chain dehydrogenase; Pro	6e-05
PRK09134	258	PRK09134, PRK09134, short chain dehydrogenase; Pro	7e-05
PRK08177	225	PRK08177, PRK08177, short chain dehydrogenase; Pro	1e-04
cd08952	480	cd08952, KR_1_SDR_x, ketoreductase (KR), subgroup	1e-04
PRK06171	266	PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydro	3e-04
PRK12859	256	PRK12859, PRK12859, 3-ketoacyl-(acyl-carrier-prote	4e-04
PRK08703	239	PRK08703, PRK08703, short chain dehydrogenase; Pro	4e-04
PRK05876	275	PRK05876, PRK05876, short chain dehydrogenase; Pro	7e-04
PRK08339	263	PRK08339, PRK08339, short chain dehydrogenase; Pro	0.001
pfam01370	233	pfam01370, Epimerase, NAD dependent epimerase/dehy	0.001
cd08950	259	cd08950, KR_fFAS_SDR_c_like, ketoacyl reductase (K	0.001
cd05348	257	cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydro	0.002
PRK07041	230	PRK07041, PRK07041, short chain dehydrogenase; Pro	0.002
COG0451	314	COG0451, WcaG, Nucleoside-diphosphate-sugar epimer	0.003
PRK12744	257	PRK12744, PRK12744, short chain dehydrogenase; Pro	0.003

>gnl|CDD|212492 cd05327, retinol-DH_like_SDR_c_like, retinol dehydrogenase (retinol-DH), Light dependent Protochlorophyllide (Pchlide) OxidoReductase (LPOR) and related proteins, classical (c) SDRs

 Score =  274 bits (703), Expect = 9e-92
 Identities = 122/278 (43%), Positives = 159/278 (57%), Gaps = 11/278 (3%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLS 96
             +ITGA SGIG ETAR LAKRGA +++  R+ +  EEA A +  +   + + V+ LDLS
Sbjct: 3   VVVITGANSGIGKETARELAKRGAHVIIACRNEEKGEEAAAEIKKETGNAKVEVIQLDLS 62

Query: 97  SLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLK 156
           SL+SVR F  +F +    L++LINNAG  A    +++DG E+ FA NYLGHFLLT LLL 
Sbjct: 63  SLASVRQFAEEFLARFPRLDILINNAGIMAPPRRLTKDGFELQFAVNYLGHFLLTNLLLP 122

Query: 157 KMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLANVLH 216
            +  +A       RIVNVSS  H     D      + ++    Y   +AY  SKLAN+L 
Sbjct: 123 VLKASA-----PSRIVNVSSIAHRAGPIDFNDLDLENNKE---YSPYKAYGQSKLANILF 174

Query: 217 TKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSKLLKTIPQGAATTC 276
           T+ELA+RL+     VTVN +HPG+VRT L R    F   L   L   L K+  QGA T  
Sbjct: 175 TRELARRLE--GTGVTVNALHPGVVRTELLRRNGSFFL-LYKLLRPFLKKSPEQGAQTAL 231

Query: 277 YVAIHPRLVNVSGKYFADCNEAWTSKLGSNSNEASRLW 314
           Y A  P L  VSGKYF+DC    +S    +   A +LW
Sbjct: 232 YAATSPELEGVSGKYFSDCKIKMSSSEALDEELAEKLW 269

Classical SDR subgroup containing retinol-DHs, LPORs, and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Pchlide reductases act in chlorophyll biosynthesis. There are distinct enzymes that catalyze Pchlide reduction in light or dark conditions. Light-dependent reduction is via an NADP-dependent SDR, LPOR. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14, dehydrogenase/reductase SDR family member (DHRS)-12 , -13 and -X (a DHRS on chromosome X), and WWOX (WW domain-containing oxidoreductase), as well as a Neurospora crassa SDR encoded by the blue light inducible bli-4 gene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 269

>gnl|CDD|212495 cd09807, retinol-DH_like_SDR_c, retinol dehydrogenases (retinol-DHs), classical (c) SDRs

 Score =  231 bits (592), Expect = 5e-75
 Identities = 123/284 (43%), Positives = 169/284 (59%), Gaps = 15/284 (5%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLS 96
           T IITGA +GIG ETAR LA+RGAR+++  R +   EEA A +  D    +++V  LDL+
Sbjct: 3   TVIITGANTGIGKETARELARRGARVIMACRDMAKCEEAAAEIRRDTLNHEVIVRHLDLA 62

Query: 97  SLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLK 156
           SL S+R F ++F +    L++LINNAG     ++ +EDG EM F  N+LGHFLLT LLL 
Sbjct: 63  SLKSIRAFAAEFLAEEDRLDVLINNAGVMRCPYSKTEDGFEMQFGVNHLGHFLLTNLLLD 122

Query: 157 KMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLANVLH 216
            + ++A +     RIVNVSS  H   +G +      ++  KS Y+   AY  SKLANVL 
Sbjct: 123 LLKKSAPS-----RIVNVSSLAHK--AGKI--NFDDLNSEKS-YNTGFAYCQSKLANVLF 172

Query: 217 TKELAQRLKQMEANVTVNCVHPGIVRTRLTRE---REGFITDLVFFLTSKLLKTIPQGAA 273
           T+ELA+RL+     VTVN +HPG+VRT L R       F++ L+  L    +KT  +GA 
Sbjct: 173 TRELARRLQG--TGVTVNALHPGVVRTELGRHTGIHHLFLSTLLNPLFWPFVKTPREGAQ 230

Query: 274 TTCYVAIHPRLVNVSGKYFADCNEAWTSKLGSNSNEASRLWAAS 317
           T+ Y+A+   L  VSGKYF+DC     +    +   A RLW  S
Sbjct: 231 TSIYLALAEELEGVSGKYFSDCKLKEPAPEAMDEETARRLWEIS 274

Classical SDR-like subgroup containing retinol-DHs and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 274

>gnl|CDD|235736 PRK06196, PRK06196, oxidoreductase; Provisional

 Score =  196 bits (500), Expect = 1e-60
 Identities = 118/332 (35%), Positives = 153/332 (46%), Gaps = 45/332 (13%)

Query: 15  SGYGSKSTAEQVTDGCPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEE 74
           SG+G+ STAE+V  G  +LS  TAI+TG  SG+G ET R LA+ GA +++PAR    A E
Sbjct: 7   SGFGAASTAEEVLAGH-DLSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVARE 65

Query: 75  AKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAISED 134
           A A +     G ++V   LDL+ L SVR F  +F      +++LINNAG  A       D
Sbjct: 66  ALAGI----DGVEVV--MLDLADLESVRAFAERFLDSGRRIDILINNAGVMACPETRVGD 119

Query: 135 GIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQIS 194
           G E  FATN+LGHF L  LL   +   A A     R+V +SS+ H             I 
Sbjct: 120 GWEAQFATNHLGHFALVNLLWPALAAGAGA-----RVVALSSAGH---------RRSPIR 165

Query: 195 RNKSH----YDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRE-- 248
            +  H    YD   AY  SK AN L    L +  K  +  V    VHPG + T L R   
Sbjct: 166 WDDPHFTRGYDKWLAYGQSKTANALFAVHLDKLGK--DQGVRAFSVHPGGILTPLQRHLP 223

Query: 249 -----REGFITDLVFFLTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEA--WTS 301
                  G++ D          KT  QGAAT  + A  P+L  + G Y  DC+ A     
Sbjct: 224 REEQVALGWV-DEHGNPIDPGFKTPAQGAATQVWAATSPQLAGMGGLYCEDCDIAEPTPK 282

Query: 302 KLGS--------NSNEASRLWAASELLVSRDP 325
                       +   A+RLWA S  L   D 
Sbjct: 283 DAPWSGVRPHAIDPEAAARLWALSAALTGVDA 314

Length = 315

>gnl|CDD|187669 cd09809, human_WWOX_like_SDR_c-like, human WWOX (WW domain-containing oxidoreductase)-like, classical (c)-like SDRs

 Score =  190 bits (484), Expect = 9e-59
 Identities = 105/291 (36%), Positives = 154/291 (52%), Gaps = 17/291 (5%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLS 96
             IITGA SGIG ETAR  A  GA ++L  R++  A  A +R+  +   + +  + LDL+
Sbjct: 3   VIIITGANSGIGFETARSFALHGAHVILACRNMSRASAAVSRILEEWHKARVEAMTLDLA 62

Query: 97  SLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLK 156
           SL SV+ F   F + N PL++L+ NA  FA    ++EDG+E TF  N+LGHF L +LL  
Sbjct: 63  SLRSVQRFAEAFKAKNSPLHVLVCNAAVFALPWTLTEDGLETTFQVNHLGHFYLVQLLED 122

Query: 157 KMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQ-----ISRNKSHYDATRAYALSKL 211
            +  +A A     R++ VSS  H +   D+    G      +S  K  Y +  AY  +KL
Sbjct: 123 VLRRSAPA-----RVIVVSSESHRF--TDLPDSCGNLDFSLLSPPKKKYWSMLAYNRAKL 175

Query: 212 ANVLHTKELAQRLKQMEANVTVNCVHPG-IVRTRLTREREGFITDLVFFLTSKLLKTIPQ 270
            N+L + EL +RL      +T N +HPG ++ + + R    ++  L+F L     K++ Q
Sbjct: 176 CNILFSNELHRRLSPR--GITSNSLHPGNMMYSSIHRNW--WVYTLLFTLARPFTKSMQQ 231

Query: 271 GAATTCYVAIHPRLVNVSGKYFADCNEAWTSKLGSNSNEASRLWAASELLV 321
           GAATT Y A  P L  + G YF +C     S    +   A +LW  SE L+
Sbjct: 232 GAATTVYCATAPELEGLGGMYFNNCFRCLPSPEAQSEATAQQLWELSERLI 282

Classical-like SDR domain of human WWOX and related proteins. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 284

>gnl|CDD|235737 PRK06197, PRK06197, short chain dehydrogenase; Provisional

 Score =  190 bits (485), Expect = 1e-58
 Identities = 102/312 (32%), Positives = 145/312 (46%), Gaps = 46/312 (14%)

Query: 31  PNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVV 90
           P+ S   A++TGA +G+G ETA  LA +GA +VL  R+L   + A AR+ +  PG+D+ +
Sbjct: 12  PDQSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTL 71

Query: 91  LPLDLSSLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLL 150
             LDL+SL+SVR       +    ++LLINNAG        + DG E+ F TN+LGHF L
Sbjct: 72  QELDLTSLASVRAAADALRAAYPRIDLLINNAGVMYTPKQTTADGFELQFGTNHLGHFAL 131

Query: 151 TKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRY--LGQISRNKSHYDATRAYAL 208
           T LLL +++    +     R+V VSS  H   +   I +  L Q  R    Y+   AY  
Sbjct: 132 TGLLLDRLLPVPGS-----RVVTVSSGGHRIRA--AIHFDDL-QWERR---YNRVAAYGQ 180

Query: 209 SKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSKLLKTI 268
           SKLAN+L T EL +RL    A       HPG+  T L R     +  +   L   L ++ 
Sbjct: 181 SKLANLLFTYELQRRLAAAGATTIAVAAHPGVSNTELARNLPRALRPVATVLAPLLAQSP 240

Query: 269 PQGAATTCYVAI--------------------HPRLVNVSGKYFADCNEAWTSKLGSNSN 308
             GA  T   A                     +P++V              +S    + +
Sbjct: 241 EMGALPTLRAATDPAVRGGQYYGPDGFGEQRGYPKVVA-------------SSAQSHDED 287

Query: 309 EASRLWAASELL 320
              RLWA SE L
Sbjct: 288 LQRRLWAVSEEL 299

Length = 306

>gnl|CDD|187670 cd09810, LPOR_like_SDR_c_like, light-dependent protochlorophyllide reductase (LPOR)-like, classical (c)-like SDRs

 Score =  154 bits (391), Expect = 1e-44
 Identities = 102/320 (31%), Positives = 147/320 (45%), Gaps = 48/320 (15%)

Query: 37  TAIITGATSGIGAETARVLAKRGA-RLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDL 95
           T +ITGA+SG+G   A+ LA+RG   +V+  R    AE+A   +    P     VL  DL
Sbjct: 3   TVVITGASSGLGLAAAKALARRGEWHVVMACRDFLKAEQAAQEVG--MPKDSYSVLHCDL 60

Query: 96  SSLSSVRNFVSQFHSLNLPLNLLINNAGKF---AHQHAISEDGIEMTFATNYLGHFLLTK 152
           +SL SVR FV  F     PL+ L+ NA  +   A +   + DG E+T   N+LGHFLLT 
Sbjct: 61  ASLDSVRQFVDNFRRTGRPLDALVCNAAVYLPTAKEPRFTADGFELTVGVNHLGHFLLTN 120

Query: 153 LLLKKMIETAKATGIQGRIVNVSSSIH------------------SWFSGDMIRYLGQIS 194
           LLL+ +    ++     RIV V S  H                     +G +  +   I 
Sbjct: 121 LLLEDL---QRSENASPRIVIVGSITHNPNTLAGNVPPRATLGDLEGLAGGLKGFNSMID 177

Query: 195 RNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPG-IVRTRLTREREGFI 253
             +  ++  +AY  SK+ N+L T EL +RL + E  +T N ++PG I  T L RE     
Sbjct: 178 GGE--FEGAKAYKDSKVCNMLTTYELHRRLHE-ETGITFNSLYPGCIAETGLFREH---- 230

Query: 254 TDLVFFLTSKLLKTIPQGAATT-------CYVAIHPRLVNVSGKYFADCNEAWT-----S 301
             L   L     K I +G  +          V   P L  VSG Y++    + +     S
Sbjct: 231 YPLFRTLFPPFQKYITKGYVSEEEAGERLAAVIADPSL-GVSGVYWSWGKASGSFENQSS 289

Query: 302 KLGSNSNEASRLWAASELLV 321
           +  S+  +A +LW  SE LV
Sbjct: 290 QESSDDEKARKLWEISEKLV 309

Classical SDR-like subgroup containing LPOR and related proteins. Protochlorophyllide (Pchlide) reductases act in chlorophyll biosynthesis. There are distinct enzymes that catalyze Pchlide reduction in light or dark conditions. Light-dependent reduction is via an NADP-dependent SDR, LPOR. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 311

>gnl|CDD|212491 cd05233, SDR_c, classical (c) SDRs

 Score =  145 bits (367), Expect = 8e-42
 Identities = 65/213 (30%), Positives = 99/213 (46%), Gaps = 29/213 (13%)

Query: 38  AIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSS 97
           A++TGA+SGIG   AR LA+ GA++VL  R+ +A  E  A  A    G + V +  D+S 
Sbjct: 1   ALVTGASSGIGRAIARRLAREGAKVVLADRNEEALAELAAIEA---LGGNAVAVQADVSD 57

Query: 98  LSSVRNFVSQFHSLNLPLNLLINNAG--KFAHQHAISEDGIEMTFATNYLGHFLLTKLLL 155
              V   V +       L++L+NNAG  +      ++++  +     N  G FLLT+  L
Sbjct: 58  EEDVEALVEEALEEFGRLDILVNNAGIARPGPLEELTDEDWDRVLDVNLTGVFLLTRAAL 117

Query: 156 KKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLANVL 215
             M +        GRIVN+ SS+             +    ++ Y A++A AL  L   L
Sbjct: 118 PHMKK-----QGGGRIVNI-SSVAGL----------RPLPGQAAYAASKA-ALEGLTRSL 160

Query: 216 HTKELAQRLKQMEANVTVNCVHPGIVRTRLTRE 248
              ELA         + VN V PG+V T +  +
Sbjct: 161 A-LELAPY------GIRVNAVAPGLVDTPMLAK 186

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 234

>gnl|CDD|223959 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

 Score =  136 bits (344), Expect = 2e-38
 Identities = 71/229 (31%), Positives = 99/229 (43%), Gaps = 32/229 (13%)

Query: 32  NLSSVTAIITGATSGIGAETARVLAKRGARLVLPA-RSLKAAEEAKARLASDCPGSDIVV 90
           +LS   A++TGA+SGIG   AR LA+ GAR+V+ A RS + A EA A    +  G     
Sbjct: 2   DLSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAA 61

Query: 91  LPLDLSS-LSSVRNFVSQFHSLNLPLNLLINNAGKFAHQ---HAISEDGIEMTFATNYLG 146
           +  D+S    SV   V+        +++L+NNAG          ++E+  +     N LG
Sbjct: 62  VAADVSDDEESVEALVAAAEEEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLG 121

Query: 147 HFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAY 206
            FLLT+  L  M +         RIVN+SS                            AY
Sbjct: 122 AFLLTRAALPLMKK--------QRIVNISSVAGLGGPPGQA-----------------AY 156

Query: 207 ALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITD 255
           A SK A +  TK LA  L      + VN V PG + T +T   E    +
Sbjct: 157 AASKAALIGLTKALALELA--PRGIRVNAVAPGYIDTPMTAALESAELE 203

Length = 251

>gnl|CDD|235546 PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score =  134 bits (341), Expect = 8e-38
 Identities = 70/230 (30%), Positives = 106/230 (46%), Gaps = 34/230 (14%)

Query: 31  PNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVV 90
            +L   TA++TGA+ GIG   A  LA  GA++V+   + +AAE   A L +   G +  V
Sbjct: 1   MSLQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAA--GGEARV 58

Query: 91  LPLDLSSLSSVRNFVSQFHSLNLPLNLLINNAG--KFAHQHAISEDGIEMTFATNYLGHF 148
           L  D+S  ++VR  +         L++L+NNAG  + A    +SE+  +     N  G F
Sbjct: 59  LVFDVSDEAAVRALIEAAVEAFGALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTF 118

Query: 149 LLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRA--Y 206
            + +  L  MI+        GRIVN+SS      SG      G  +  +++Y A +A   
Sbjct: 119 NVVRAALPPMIKARY-----GRIVNISSV-----SGVT----G--NPGQTNYSAAKAGVI 162

Query: 207 ALSK-LANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITD 255
             +K LA      ELA R       +TVN V PG + T +T      +  
Sbjct: 163 GFTKALA-----LELASR------GITVNAVAPGFIDTDMTEGLPEEVKA 201

Length = 246

>gnl|CDD|187585 cd05324, carb_red_PTCR-like_SDR_c, Porcine testicular carbonyl reductase (PTCR)-like, classical (c) SDRs

 Score =  129 bits (327), Expect = 5e-36
 Identities = 78/263 (29%), Positives = 115/263 (43%), Gaps = 50/263 (19%)

Query: 37  TAIITGATSGIGAETARVLAKRGA-RLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDL 95
            A++TGA  GIG E  R LAK G   ++L AR ++  + A  +L ++  G  +    LD+
Sbjct: 2   VALVTGANRGIGFEIVRQLAKSGPGTVILTARDVERGQAAVEKLRAE--GLSVRFHQLDV 59

Query: 96  SSLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAISE---DGIEMTFATNYLGHFLLTK 152
           +  +S+             L++L+NNAG        S    +    T  TN+ G   +T+
Sbjct: 60  TDDASIEAAADFVEEKYGGLDILVNNAGIAFKGFDDSTPTREQARETMKTNFFGTVDVTQ 119

Query: 153 LLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLA 212
            LL  +          GRIVNVSS             LG +         T AY +SK A
Sbjct: 120 ALLPLL-----KKSPAGRIVNVSSG------------LGSL---------TSAYGVSKAA 153

Query: 213 -NVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSKLLKTIPQG 271
            N L T+ LA+ LK  E  + VN   PG V+T +   +                KT  +G
Sbjct: 154 LNAL-TRILAKELK--ETGIKVNACCPGWVKTDMGGGKA--------------PKTPEEG 196

Query: 272 AATTCYVAIHPRLVNVSGKYFAD 294
           A T  Y+A+ P     +GK+F+D
Sbjct: 197 AETPVYLALLPPDGEPTGKFFSD 219

PTCR is a classical SDR which catalyzes the NADPH-dependent reduction of ketones on steroids and prostaglandins. Unlike most SDRs, PTCR functions as a monomer. This subgroup also includes human carbonyl reductase 1 (CBR1) and CBR3. CBR1 is an NADPH-dependent SDR with broad substrate specificity and may be responsible for the in vivo reduction of quinones, prostaglandins, and other carbonyl-containing compounds. In addition it includes poppy NADPH-dependent salutaridine reductase which catalyzes the stereospecific reduction of salutaridine to 7(S)-salutaridinol in the biosynthesis of morphine, and Arabidopsis SDR1,a menthone reductase, which catalyzes the reduction of menthone to neomenthol, a compound with antimicrobial activity; SDR1 can also carry out neomenthol oxidation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 225

>gnl|CDD|235627 PRK05854, PRK05854, short chain dehydrogenase; Provisional

 Score =  124 bits (314), Expect = 3e-33
 Identities = 98/314 (31%), Positives = 148/314 (47%), Gaps = 42/314 (13%)

Query: 31  PNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVV 90
           P+LS   A++TGA+ G+G   AR LA  GA ++LP R+    E A A + +  P + + +
Sbjct: 10  PDLSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSL 69

Query: 91  LPLDLSSLSSVRNFVSQFHSLNLPLNLLINNAGKFA-HQHAISEDGIEMTFATNYLGHFL 149
             LDLSSL+SV     Q  +   P++LLINNAG     +   + DG E+ F TN+LGHF 
Sbjct: 70  RALDLSSLASVAALGEQLRAEGRPIHLLINNAGVMTPPERQTTADGFELQFGTNHLGHFA 129

Query: 150 LTKLLLKKMIETAKATGIQGRIVNVSS------SIHSWFSGDMIRYLGQISRNKSHYDAT 203
           LT  LL  ++   +A     R+ + SS      +I+ W           ++  +S Y   
Sbjct: 130 LTAHLL-PLLRAGRA-----RVTSQSSIAARRGAIN-W---------DDLNWERS-YAGM 172

Query: 204 RAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLT-------REREGFITDL 256
           RAY+ SK+A  L   EL +R +     +T N  HPG+  T L        R+++  +  L
Sbjct: 173 RAYSQSKIAVGLFALELDRRSRAAGWGITSNLAHPGVAPTNLLAARPEVGRDKDTLMVRL 232

Query: 257 VFFLTSK--LLKTIPQGAATTCYVAIHP-----RLVNVSGKYFAD---CNEAWTSKLGSN 306
           +  L+++  L+ T+        Y A  P           G          +A    L  N
Sbjct: 233 IRSLSARGFLVGTVESAILPALYAATSPDAEGGAFYGPRGPGELGGGPVEQALYPPLRRN 292

Query: 307 SNEASRLWAASELL 320
           + EA+RLW  SE L
Sbjct: 293 A-EAARLWEVSEQL 305

Length = 313

>gnl|CDD|180983 PRK07453, PRK07453, protochlorophyllide oxidoreductase; Validated

 Score =  120 bits (304), Expect = 9e-32
 Identities = 77/234 (32%), Positives = 114/234 (48%), Gaps = 28/234 (11%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLS 96
           T IITGA+SG+G   A+ LAKRG  +++  R+LK AE A   L    P     ++ +DL 
Sbjct: 8   TVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQEL--GIPPDSYTIIHIDLG 65

Query: 97  SLSSVRNFVSQFHSLNLPLNLLINNAGKF---AHQHAISEDGIEMTFATNYLGHFLLTKL 153
            L SVR FV  F +L  PL+ L+ NA  +     +   S  G E++ ATN+LGHFLL  L
Sbjct: 66  DLDSVRRFVDDFRALGKPLDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNL 125

Query: 154 LLKKMIETAKATGIQGRIVNVSSSIHSW-----------------FSGDMIRYLGQISR- 195
           LL+ +    K+     R+V + +   +                   SG    +   IS  
Sbjct: 126 LLEDL---KKSPAPDPRLVILGTVTANPKELGGKIPIPAPADLGDLSGFEAGFKAPISMA 182

Query: 196 NKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIV-RTRLTRE 248
           +   +   +AY  SKL N+L  +EL +R  +    +T + ++PG V  T L R 
Sbjct: 183 DGKKFKPGKAYKDSKLCNMLTMRELHRRYHE-STGITFSSLYPGCVADTPLFRN 235

Length = 322

>gnl|CDD|223377 COG0300, DltE, Short-chain dehydrogenases of various substrate specificities [General function prediction only]

 Score =  118 bits (299), Expect = 2e-31
 Identities = 68/210 (32%), Positives = 95/210 (45%), Gaps = 29/210 (13%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLS 96
           TA+ITGA+SGIGAE A+ LA+RG  L+L AR     E     L     G ++ V+P DLS
Sbjct: 8   TALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKT-GVEVEVIPADLS 66

Query: 97  SLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQ---HAISEDGIEMTFATNYLGHFLLTKL 153
              ++     +      P+++L+NNAG F        +S D  E     N L    LTK 
Sbjct: 67  DPEALERLEDELKERGGPIDVLVNNAG-FGTFGPFLELSLDEEEEMIQLNILALTRLTKA 125

Query: 154 LLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLAN 213
           +L  M+E        G I+N+ S      +G +           + Y AT+A+ LS  + 
Sbjct: 126 VLPGMVERG-----AGHIINIGS-----AAGLI-----PTPYM-AVYSATKAFVLS-FSE 168

Query: 214 VLHTKELAQRLKQMEANVTVNCVHPGIVRT 243
            L  +EL          V V  V PG  RT
Sbjct: 169 ALR-EELKGT------GVKVTAVCPGPTRT 191

Length = 265

>gnl|CDD|177654 PLN00015, PLN00015, protochlorophyllide reductase

 Score =  119 bits (300), Expect = 2e-31
 Identities = 105/324 (32%), Positives = 152/324 (46%), Gaps = 58/324 (17%)

Query: 39  IITGATSGIGAETARVLAKRGARLVLPA-RS-LKAAEEAKARLASDCPGSDIVVLPLDLS 96
           IITGA+SG+G  TA+ LA+ G   V+ A R  LKA   AK+   +  P     V+ LDL+
Sbjct: 1   IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKS---AGMPKDSYTVMHLDLA 57

Query: 97  SLSSVRNFVSQFHSLNLPLNLLINNAGKF---AHQHAISEDGIEMTFATNYLGHFLLTKL 153
           SL SVR FV  F     PL++L+ NA  +   A +   + DG E++  TN+LGHFLL++L
Sbjct: 58  SLDSVRQFVDNFRRSGRPLDVLVCNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRL 117

Query: 154 LLKKMIETAKATGIQGRIVNVSSSIHSWFS-----------GDMIRYL--GQISRNKS-- 198
           LL  +    K+     R++ V S   +  +           GD+ R L  G    N S  
Sbjct: 118 LLDDL---KKSDYPSKRLIIVGSITGNTNTLAGNVPPKANLGDL-RGLAGGLNGLNSSAM 173

Query: 199 ----HYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPG-IVRTRLTREREGFI 253
                +D  +AY  SK+ N+L  +E  +R  + E  +T   ++PG I  T L RE     
Sbjct: 174 IDGGEFDGAKAYKDSKVCNMLTMQEFHRRYHE-ETGITFASLYPGCIATTGLFREH---- 228

Query: 254 TDLVFFLTSKLLKTIPQGAATTCYVAIHP---RLVNV--------SGKYFA-----DCNE 297
             L   L     K I +G     YV+      RL  V        SG Y++        E
Sbjct: 229 IPLFRLLFPPFQKYITKG-----YVSEEEAGKRLAQVVSDPSLTKSGVYWSWNGGSASFE 283

Query: 298 AWTSKLGSNSNEASRLWAASELLV 321
              S+  S++ +A ++W  SE LV
Sbjct: 284 NQLSQEASDAEKAKKVWEISEKLV 307

Length = 308

>gnl|CDD|200089 TIGR01289, LPOR, light-dependent protochlorophyllide reductase

 Score =  117 bits (295), Expect = 1e-30
 Identities = 99/315 (31%), Positives = 146/315 (46%), Gaps = 38/315 (12%)

Query: 37  TAIITGATSGIGAETARVLAKRGA-RLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDL 95
           T IITGA+SG+G   A+ LA  G   +++  R    AE+A   L    P     ++ LDL
Sbjct: 5   TVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLG--MPKDSYTIMHLDL 62

Query: 96  SSLSSVRNFVSQFHSLNLPLNLLINNAGKF---AHQHAISEDGIEMTFATNYLGHFLLTK 152
            SL SVR FV QF     PL+ L+ NA  +   A +   + DG E++  TN+LGHFLL  
Sbjct: 63  GSLDSVRQFVQQFRESGRPLDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCN 122

Query: 153 LLL---KKMIETAKATGIQGRIVNVSSSIHSW---------FSGDMIRYLGQISR-NKSH 199
           LLL   K      K   I G I   ++++             SG    +   I+  +   
Sbjct: 123 LLLDDLKNSPNKDKRLIIVGSITGNTNTLAGNVPPKANLGDLSGLAAGFKAPIAMIDGKE 182

Query: 200 YDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPG-IVRTRLTREREGFITDLVF 258
           +   +AY  SK+ N+L  +EL +R    E  +T   ++PG I  T L RE       L  
Sbjct: 183 FKGAKAYKDSKVCNMLTVRELHRRFHD-ETGITFASLYPGCIADTGLFREH----VPLFR 237

Query: 259 FLTSKLLKTIPQGAAT-------TCYVAIHPRLVNVSGKYFADCN--EAWTSKL---GSN 306
            L     K I +G  +          V   P+L   SG Y++  N  E++ ++L    S+
Sbjct: 238 TLFPPFQKYITKGYVSEEEAGERLAQVVSDPKL-KKSGVYWSWGNRQESFVNQLSEEVSD 296

Query: 307 SNEASRLWAASELLV 321
            ++AS++W  SE LV
Sbjct: 297 DSKASKMWDLSEKLV 311

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form [Biosynthesis of cofactors, prosthetic groups, and carriers, Chlorophyll and bacteriochlorphyll]. Length = 314

>gnl|CDD|183775 PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

 Score =  109 bits (274), Expect = 5e-28
 Identities = 60/213 (28%), Positives = 86/213 (40%), Gaps = 27/213 (12%)

Query: 33  LSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLP 92
           L    A++TGA  GIG   A  LA  GA +++       A      + +   G       
Sbjct: 4   LEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAA--GGKARARQ 61

Query: 93  LDLSSLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHA--ISEDGIEMTFATNYLGHFLL 150
           +D+   ++++  V+        L++L+ NAG F       + ++  E     N  G FLL
Sbjct: 62  VDVRDRAALKAAVAAGVEDFGRLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLL 121

Query: 151 TKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSK 210
           T+  L  +I         GRIV  SS      +G  + Y G              YA SK
Sbjct: 122 TQAALPALIRAG-----GGRIVLTSSV-----AGPRVGYPGLA-----------HYAASK 160

Query: 211 LANVLHTKELAQRLKQMEANVTVNCVHPGIVRT 243
              V  T+ LA  L     N+TVN VHPG V T
Sbjct: 161 AGLVGFTRALALELA--ARNITVNSVHPGGVDT 191

Length = 251

>gnl|CDD|187594 cd05333, BKR_SDR_c, beta-Keto acyl carrier protein reductase (BKR), involved in Type II FAS, classical (c) SDRs

 Score =  108 bits (273), Expect = 6e-28
 Identities = 72/248 (29%), Positives = 114/248 (45%), Gaps = 57/248 (22%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLS 96
            A++TGA+ GIG   A  LA  GA++ +  RS +AA E    + +   G +   L  D+S
Sbjct: 2   VALVTGASRGIGRAIALRLAAEGAKVAVTDRSEEAAAETVEEIKA--LGGNAAALEADVS 59

Query: 97  SLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAISEDG--IEMT-------FATNYLGH 147
              +V   V +  +   P+++L+NNAG       I+ D   + M+          N  G 
Sbjct: 60  DREAVEALVEKVEAEFGPVDILVNNAG-------ITRDNLLMRMSEEDWDAVINVNLTGV 112

Query: 148 FLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQI-SRNKSHYDATRA- 205
           F +T+ +++ MI+        GRI+N+SS +            G I +  +++Y A++A 
Sbjct: 113 FNVTQAVIRAMIKRRS-----GRIINISSVV------------GLIGNPGQANYAASKAG 155

Query: 206 -YALSK-LANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSK 263
               +K LA     KELA R       +TVN V PG + T +T         L   +  K
Sbjct: 156 VIGFTKSLA-----KELASR------GITVNAVAPGFIDTDMTDA-------LPEKVKEK 197

Query: 264 LLKTIPQG 271
           +LK IP G
Sbjct: 198 ILKQIPLG 205

This subgroup includes the Escherichai coli K12 BKR, FabG. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 240

>gnl|CDD|187668 cd09808, DHRS-12_like_SDR_c-like, human dehydrogenase/reductase SDR family member (DHRS)-12/FLJ13639-like, classical (c)-like SDRs

 Score =  107 bits (268), Expect = 3e-27
 Identities = 75/260 (28%), Positives = 128/260 (49%), Gaps = 24/260 (9%)

Query: 39  IITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSL 98
           +ITGA SGIG   A  +AKRG  + +  R+   AEEA+  + ++    +I +  +D+S  
Sbjct: 5   LITGANSGIGKAAALAIAKRGGTVHMVCRNQTRAEEARKEIETESGNQNIFLHIVDMSDP 64

Query: 99  SSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKM 158
             V  FV +F      L++LINNAG   ++  ++EDG+E  FATN LG ++LT  L+  +
Sbjct: 65  KQVWEFVEEFKEEGKKLHVLINNAGCMVNKRELTEDGLEKNFATNTLGTYILTTHLI-PV 123

Query: 159 IETAKATGIQGRIVNVSSSIHSWFSGDMIRY---LGQISRNKSHYDATRAYALSKLANVL 215
           +E  +      R++ VS       SG M+        +   ++ +D T  YA +K   V+
Sbjct: 124 LEKEE----DPRVITVS-------SGGMLVQKLNTNNLQSERTAFDGTMVYAQNKRQQVI 172

Query: 216 HTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSKLLKTIPQGAATT 275
            T++ A++       +  + +HPG   T   R     + D       + L++  QGA T 
Sbjct: 173 MTEQWAKK----HPEIHFSVMHPGWADTPAVRNS---MPDFHARFKDR-LRSEEQGADTV 224

Query: 276 CYVAI-HPRLVNVSGKYFAD 294
            ++A+        SG+++ D
Sbjct: 225 VWLALSSAAAKAPSGRFYQD 244

Classical SDR-like subgroup containing human DHRS-12/FLJ13639, the 36K protein of zebrafish CNS myelin, and related proteins. DHRS-12/FLJ13639 is expressed in neurons and oligodendrocytes in the human cerebral cortex. Proteins in this subgroup share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 255

>gnl|CDD|235506 PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  106 bits (266), Expect = 5e-27
 Identities = 65/218 (29%), Positives = 95/218 (43%), Gaps = 35/218 (16%)

Query: 32  NLSSVTAIITGATSGIGAETARVLAKRGARLVL-PARSLKAAEEAKARLASDCPGSDIVV 90
            L    AI+TGA+ GIG   A +LAK GA++V+    + +AA+E    +  +  G D + 
Sbjct: 2   KLMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEE--GGDAIA 59

Query: 91  LPLDLSSLSSVRNFVSQFHSLNLPLNLLINNAGK-----FAHQHAISEDGIEMTFATNYL 145
           +  D+SS   V N V Q       +++L+NNAG             +++  +     N  
Sbjct: 60  VKADVSSEEDVENLVEQIVEKFGKIDILVNNAGISNFGLVTDM---TDEEWDRVIDVNLT 116

Query: 146 GHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRA 205
           G  LLT+  L  MI+        G IVN+SS          I   G I  +         
Sbjct: 117 GVMLLTRYALPYMIKRK-----SGVIVNISS----------IW--GLIGAS-----CEVL 154

Query: 206 YALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRT 243
           Y+ SK A    TK LA+ L      + VN V PG + T
Sbjct: 155 YSASKGAVNAFTKALAKELAPS--GIRVNAVAPGAIDT 190

Length = 247

>gnl|CDD|237218 PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  104 bits (263), Expect = 2e-26
 Identities = 59/218 (27%), Positives = 93/218 (42%), Gaps = 33/218 (15%)

Query: 31  PNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVV 90
            +L    A++TGA  G+G   A  LA+ GA +V+  RS + A E          G     
Sbjct: 2   GSLMGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEAL-GRRAQA 60

Query: 91  LPLDLSSLSSVRNFVSQFHSLNLPLNLLINNAG-----KFAHQHAISEDGIEMTFATNYL 145
           +  D++  +++   V+        +++L+NNAG       A    +S+D  +     N  
Sbjct: 61  VQADVTDKAALEAAVAAAVERFGRIDILVNNAGIFEDKPLA---DMSDDEWDEVIDVNLS 117

Query: 146 GHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRA 205
           G F L + ++  M +        GRIVN+SS      +G    + G+             
Sbjct: 118 GVFHLLRAVVPPMRKQR-----GGRIVNISSV-----AGL-PGWPGRS-----------N 155

Query: 206 YALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRT 243
           YA +K   V  TK LA+ L   E  +TVN V PG + T
Sbjct: 156 YAAAKAGLVGLTKALARELA--EYGITVNMVAPGDIDT 191

Length = 249

>gnl|CDD|187593 cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxysteroid dehydrogenase type 1 (11beta-HSD1)-like, classical (c) SDRs

 Score =  102 bits (257), Expect = 1e-25
 Identities = 74/212 (34%), Positives = 93/212 (43%), Gaps = 37/212 (17%)

Query: 39  IITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSL 98
           IITGA+SGIG E A  LA+ GARLVL AR  +  EE K+            V+PLD+S L
Sbjct: 7   IITGASSGIGEELAYHLARLGARLVLSARREERLEEVKSECLEL-GAPSPHVVPLDMSDL 65

Query: 99  SSVRNFVSQFHSLNLPLNLLINNAG--KFAHQHAISEDGIEMTFATNYLGHFLLTKLLLK 156
                 V +   L   L++LINNAG    +  H  S D        NY G   LTK  L 
Sbjct: 66  EDAEQVVEEALKLFGGLDILINNAGISMRSLFHDTSIDVDRKIMEVNYFGPVALTKAALP 125

Query: 157 KMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLA---- 212
            +IE +     QG IV V SSI                          AYA SK A    
Sbjct: 126 HLIERS-----QGSIVVV-SSIAGKIGVPF----------------RTAYAASKHALQGF 163

Query: 213 -NVLHTKELAQRLKQMEANVTVNCVHPGIVRT 243
            + L   EL++       N++V  V PG++ T
Sbjct: 164 FDSLRA-ELSEP------NISVTVVCPGLIDT 188

Human 11beta_HSD1 catalyzes the NADP(H)-dependent interconversion of cortisone and cortisol. This subgroup also includes human dehydrogenase/reductase SDR family member 7C (DHRS7C) and DHRS7B. These proteins have the GxxxGxG nucleotide binding motif and S-Y-K catalytic triad characteristic of the SDRs, but have an atypical C-terminal domain that contributes to homodimerization contacts. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|187604 cd05346, SDR_c5, classical (c) SDR, subgroup 5

 Score = 99.3 bits (248), Expect = 2e-24
 Identities = 64/215 (29%), Positives = 96/215 (44%), Gaps = 38/215 (17%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLS 96
           T +ITGA+SGIG  TAR  AK GA+L+L  R  +  +E    L +  P   ++ L LD+S
Sbjct: 2   TVLITGASSGIGEATARRFAKAGAKLILTGRRAERLQELADELGAKFPVK-VLPLQLDVS 60

Query: 97  SLSSVRNFVSQFHSLNLP-----LNLLINNAGK---FAHQHAISEDGIEMTFATNYLGHF 148
              S+   +      NLP     +++L+NNAG             +  E    TN  G  
Sbjct: 61  DRESIEAALE-----NLPEEFRDIDILVNNAGLALGLDPAQEADLEDWETMIDTNVKGLL 115

Query: 149 LLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYAL 208
            +T+L+L  MI        QG I+N+ S    +       Y G      + Y AT+A A+
Sbjct: 116 NVTRLILPIMIARN-----QGHIINLGSIAGRYP------YAG-----GNVYCATKA-AV 158

Query: 209 SKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRT 243
            + +  L  K+L          + V  + PG+V T
Sbjct: 159 RQFSLNLR-KDLI------GTGIRVTNIEPGLVET 186

These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249

>gnl|CDD|233590 TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier-protein) reductase

 Score = 98.4 bits (246), Expect = 3e-24
 Identities = 69/224 (30%), Positives = 106/224 (47%), Gaps = 49/224 (21%)

Query: 38  AIITGATSGIGAETARVLAKRGARLVL-PARSLKAAEEAKARLASDCPGSDIVVLPLDLS 96
           A++TGA+ GIG   A  LAK GA++++    S + AEE    L +   G   + +  D+S
Sbjct: 1   ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAY--GVKALGVVCDVS 58

Query: 97  SLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAISEDG--IEMT-------FATNYLGH 147
               V+  V +      P+++L+NNAG       I+ D   + M          TN  G 
Sbjct: 59  DREDVKAVVEEIEEELGPIDILVNNAG-------ITRDNLLMRMKEEDWDAVIDTNLTGV 111

Query: 148 FLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRA-- 205
           F LT+ +L+ MI+        GRI+N+SS +    +       GQ     ++Y A++A  
Sbjct: 112 FNLTQAVLRIMIKQRS-----GRIINISSVVGLMGNA------GQ-----ANYAASKAGV 155

Query: 206 YALSK-LANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRE 248
              +K LA     KELA R      N+TVN V PG + T +T +
Sbjct: 156 IGFTKSLA-----KELASR------NITVNAVAPGFIDTDMTDK 188

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239

>gnl|CDD|235975 PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 98.7 bits (247), Expect = 4e-24
 Identities = 73/246 (29%), Positives = 105/246 (42%), Gaps = 41/246 (16%)

Query: 33  LSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLP 92
           L    AI+TGA+SGIG   AR  A  GAR+V+  R+ +AAE   A + +   G   + + 
Sbjct: 3   LEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILA---GGRAIAVA 59

Query: 93  LDLSSLSSVRNFV----SQFHSLNLPLNLLINNAG---KFAHQHAISEDGIEMTFATNYL 145
            D+S  + V   V     +F S+++    L+NNAG   +      + E   +  FA N  
Sbjct: 60  ADVSDEADVEAAVAAALERFGSVDI----LVNNAGTTHRNGPLLDVDEAEFDRIFAVNVK 115

Query: 146 GHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRA 205
             +L T+  +  M          G IVNV+S+     +G  +R    +            
Sbjct: 116 SPYLWTQAAVPAMRGEGG-----GAIVNVAST-----AG--LRPRPGLG----------W 153

Query: 206 YALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSKLL 265
           Y  SK A +  TK LA  L      + VN V P +V T L     G  T       +K L
Sbjct: 154 YNASKGAVITLTKALAAELG--PDKIRVNAVAPVVVETGLLEAFMGEPTPENR---AKFL 208

Query: 266 KTIPQG 271
            TIP G
Sbjct: 209 ATIPLG 214

Length = 251

>gnl|CDD|235500 PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score = 96.8 bits (242), Expect = 1e-23
 Identities = 66/229 (28%), Positives = 103/229 (44%), Gaps = 49/229 (21%)

Query: 32  NLSSVTAIITGATSGIGAETARVLAKRGARLVLP-ARSLKAAEEAKARLASDCPGSDIVV 90
           +L    A++TGA+ GIG   A  LA +GA +V+  A S   AE   A + +   G   + 
Sbjct: 2   SLEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGAL--GGKALA 59

Query: 91  LPLDLSSLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAISEDG--IEMT-------FA 141
           +  D+S   SV   V +  +    +++L+NNAG       I+ D   + M          
Sbjct: 60  VQGDVSDAESVERAVDEAKAEFGGVDILVNNAG-------ITRDNLLMRMKEEDWDRVID 112

Query: 142 TNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYD 201
           TN  G F LTK + + M++        GRI+N+SS +            G     +++Y 
Sbjct: 113 TNLTGVFNLTKAVARPMMK-----QRSGRIINISSVVGLM---------GNP--GQANYA 156

Query: 202 ATRA--YALSK-LANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTR 247
           A++A     +K LA     +ELA R       +TVN V PG + T +T 
Sbjct: 157 ASKAGVIGFTKSLA-----RELASR------GITVNAVAPGFIETDMTD 194

Length = 248

>gnl|CDD|180773 PRK06949, PRK06949, short chain dehydrogenase; Provisional

 Score = 96.8 bits (241), Expect = 3e-23
 Identities = 66/219 (30%), Positives = 112/219 (51%), Gaps = 26/219 (11%)

Query: 32  NLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVL 91
           NL    A++TGA+SG+GA  A+VLA+ GA++VL +R ++  +E +A + ++  G    V+
Sbjct: 6   NLEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAE--GGAAHVV 63

Query: 92  PLDLSSLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHA--ISEDGIEMTFATNYLGHFL 149
            LD++   S++  V+   +    +++L+NN+G    Q    ++    +  F TN  G F 
Sbjct: 64  SLDVTDYQSIKAAVAHAETEAGTIDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFF 123

Query: 150 LTKLLLKKMIETAKATG---IQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAY 206
           + + + K+MI  AK  G     GRI+N++S      +G  +R L QI            Y
Sbjct: 124 VAQEVAKRMIARAKGAGNTKPGGRIINIAS-----VAG--LRVLPQIG----------LY 166

Query: 207 ALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRL 245
            +SK A V  T+ +A    +   NV   C  PG + T +
Sbjct: 167 CMSKAAVVHMTRAMALEWGRHGINVNAIC--PGYIDTEI 203

Length = 258

>gnl|CDD|187632 cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score = 95.4 bits (238), Expect = 6e-23
 Identities = 58/214 (27%), Positives = 88/214 (41%), Gaps = 41/214 (19%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLS 96
             +ITG +SGIG   A  LA +G R++  AR+    E     L       ++ VL LD++
Sbjct: 2   VVLITGCSSGIGLALALALAAQGYRVIATARNPDKLESLGELL-----NDNLEVLELDVT 56

Query: 97  SLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHA-------ISEDGIEMTFATNYLGHFL 149
              S++  V +       +++L+NNAG     +         S + +   F  N  G   
Sbjct: 57  DEESIKAAVKEVIERFGRIDVLVNNAG-----YGLFGPLEETSIEEVRELFEVNVFGPLR 111

Query: 150 LTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALS 209
           +T+  L  M +        GRIVNVSS         +   +         Y A++A AL 
Sbjct: 112 VTRAFLPLMRKQG-----SGRIVNVSS---------VAGLVPT--PFLGPYCASKA-ALE 154

Query: 210 KLANVLHTKELAQRLKQMEANVTVNCVHPGIVRT 243
            L+  L   ELA         + V  + PG VRT
Sbjct: 155 ALSESLR-LELAP------FGIKVTIIEPGPVRT 181

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|187586 cd05325, carb_red_sniffer_like_SDR_c, carbonyl reductase sniffer-like, classical (c) SDRs

 Score = 94.3 bits (235), Expect = 1e-22
 Identities = 67/218 (30%), Positives = 94/218 (43%), Gaps = 34/218 (15%)

Query: 38  AIITGATSGIGAETARVLAKRGARLVLPA-RSLKAAEEAKARLASDCPGSDIVVLPLDLS 96
            +ITGA+ GIG E  R L  RG   V+   R   AA E  A  AS    S + +L LD++
Sbjct: 1   VLITGASRGIGLELVRQLLARGNNTVIATCRDPSAATELAALGASH---SRLHILELDVT 57

Query: 97  SL--SSVRNFVSQFHSLNLPLNLLINNAG---KFAHQHAISEDGIEMTFATNYLGHFLLT 151
                S      +    +  L++LINNAG    +     +  + +   F  N LG  LLT
Sbjct: 58  DEIAESAEAVAERLG--DAGLDVLINNAGILHSYGPASEVDSEDLLEVFQVNVLGPLLLT 115

Query: 152 KLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKL 211
           +  L  ++        + +I+N+SS +    S       G  S           Y  SK 
Sbjct: 116 QAFL-PLLLKGA----RAKIINISSRVG---SIGDNTSGGWYS-----------YRASKA 156

Query: 212 A-NVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRE 248
           A N+L TK LA  LK     +TV  +HPG VRT +   
Sbjct: 157 ALNML-TKSLAVELK--RDGITVVSLHPGWVRTDMGGP 191

Sniffer is an NADPH-dependent carbonyl reductase of the classical SDR family. Studies in Drosophila melanogaster implicate Sniffer in the prevention of neurodegeneration due to aging and oxidative-stress. This subgroup also includes Rhodococcus sp. AD45 IsoH, which is an NAD-dependent 1-hydroxy-2-glutathionyl-2-methyl-3-butene dehydrogenase involved in isoprene metabolism, Aspergillus nidulans StcE encoded by a gene which is part of a proposed sterigmatocystin biosynthesis gene cluster, Bacillus circulans SANK 72073 BtrF encoded by a gene found in the butirosin biosynthesis gene cluster, and Aspergillus parasiticus nor-1 involved in the biosynthesis of aflatoxins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 233

>gnl|CDD|181305 PRK08226, PRK08226, short chain dehydrogenase; Provisional

 Score = 93.3 bits (232), Expect = 5e-22
 Identities = 67/215 (31%), Positives = 99/215 (46%), Gaps = 28/215 (13%)

Query: 31  PNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVV 90
             L+  TA+ITGA  GIG   ARV A+ GA L+L   S +  + A   L     G     
Sbjct: 2   GKLTGKTALITGALQGIGEGIARVFARHGANLILLDISPEIEKLAD-ELCG--RGHRCTA 58

Query: 91  LPLDLSSLSSVRNFVSQFHSLNLPLNLLINNAG--KFAHQHAISEDGIEMTFATNYLGHF 148
           +  D+   +SV   + +       +++L+NNAG  +      +S++  +     N  G +
Sbjct: 59  VVADVRDPASVAAAIKRAKEKEGRIDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVW 118

Query: 149 LLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYAL 208
            +TK +L +MI         GRIV +SS      +GDM+   G+            AYAL
Sbjct: 119 NVTKAVLPEMIARKD-----GRIVMMSS-----VTGDMVADPGET-----------AYAL 157

Query: 209 SKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRT 243
           +K A V  TK LA    Q  + + VN + PG VRT
Sbjct: 158 TKAAIVGLTKSLAVEYAQ--SGIRVNAICPGYVRT 190

Length = 263

>gnl|CDD|187602 cd05344, BKR_like_SDR_like, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR)-like, SDR

 Score = 91.6 bits (228), Expect = 1e-21
 Identities = 62/217 (28%), Positives = 94/217 (43%), Gaps = 29/217 (13%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLS 96
            A++T A+SGIG   AR LA+ GAR+ + AR+ +  E A + L +   G   VV   DL+
Sbjct: 3   VALVTAASSGIGLAIARALAREGARVAICARNRENLERAASELRAGGAGVLAVV--ADLT 60

Query: 97  SLSSVRNFVSQFHSLNLPLNLLINNAG--KFAHQHAISEDGIEMTFATNYLGHFLLTKLL 154
               +   V +       +++L+NNAG         ++++     F    L    + + +
Sbjct: 61  DPEDIDRLVEKAGDAFGRVDILVNNAGGPPPGPFAELTDEDWLEAFDLKLLSVIRIVRAV 120

Query: 155 LKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLANV 214
           L  M E        GRIVN+SS   +    +    L          +  RA  L  L   
Sbjct: 121 LPGMKERGW-----GRIVNISSL--TVKEPEPNLVLS---------NVARA-GLIGLVKT 163

Query: 215 LHTKELAQRLKQMEANVTVNCVHPGIVRT-RLTRERE 250
           L ++ELA         VTVN V PG + T R+ R  E
Sbjct: 164 L-SRELAPD------GVTVNSVLPGYIDTERVRRLLE 193

This subgroup resembles the SDR family, but does not have a perfect match to the NAD-binding motif or the catalytic tetrad characteristic of the SDRs. It includes the SDRs, Q9HYA2 from Pseudomonas aeruginosa PAO1 and APE0912 from Aeropyrum pernix K1. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|226674 COG4221, COG4221, Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

 Score = 91.2 bits (227), Expect = 2e-21
 Identities = 60/216 (27%), Positives = 93/216 (43%), Gaps = 30/216 (13%)

Query: 32  NLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVL 91
            L    A+ITGA+SGIG  TAR LA+ GA++VL AR  +  E     + +       + L
Sbjct: 3   TLKGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGAG----AALAL 58

Query: 92  PLDLSSLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFL 149
            LD++  ++V   +         +++L+NNAG            D  +    TN  G   
Sbjct: 59  ALDVTDRAAVEAAIEALPEEFGRIDILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLN 118

Query: 150 LTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALS 209
            T+ +L  M+E        G I+N+ S      +G   RY        + Y AT+A A+ 
Sbjct: 119 GTRAVLPGMVERK-----SGHIINLGS-----IAG---RYPY---PGGAVYGATKA-AVR 161

Query: 210 KLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRL 245
             +  L  +ELA         + V  + PG+V T  
Sbjct: 162 AFSLGLR-QELAGT------GIRVTVISPGLVETTE 190

Length = 246

>gnl|CDD|187643 cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine reductase (KDSR) and related proteins, classical (c) SDR

 Score = 90.8 bits (226), Expect = 2e-21
 Identities = 60/223 (26%), Positives = 85/223 (38%), Gaps = 40/223 (17%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVL--PLD 94
             +ITG +SGIG   A+ L K GA +++ ARS    EEA   + ++   S   V     D
Sbjct: 3   HVLITGGSSGIGKALAKELVKEGANVIIVARSESKLEEAVEEIEAEANASGQKVSYISAD 62

Query: 95  LSSLSSVRNFVSQFHSLNLPLNLLINNAGK--FAHQHAISEDGIEMTFATNYLGHFLLTK 152
           LS    V    +Q      P +L++N AG         ++ +  E     NY G   +  
Sbjct: 63  LSDYEEVEQAFAQAVEKGGPPDLVVNCAGISIPGLFEDLTAEEFERGMDVNYFGSLNVAH 122

Query: 153 LLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLA 212
            +L  M E        G IV VSS                +      Y    AY  SK A
Sbjct: 123 AVLPLMKEQRP-----GHIVFVSSQ------------AALVG--IYGYS---AYCPSKFA 160

Query: 213 NVLHTKELAQRLKQMEA---NVTVNCVHPGIVRTRLTREREGF 252
                + LA+ L + E    N+ V+ V+P    T       GF
Sbjct: 161 ----LRGLAESL-RQELKPYNIRVSVVYPPDTDT------PGF 192

These proteins include members identified as KDSR, ribitol type dehydrogenase, and others. The group shows strong conservation of the active site tetrad and glycine rich NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 239

>gnl|CDD|212493 cd08932, HetN_like_SDR_c, HetN oxidoreductase-like, classical (c) SDR

 Score = 90.5 bits (225), Expect = 2e-21
 Identities = 53/213 (24%), Positives = 82/213 (38%), Gaps = 32/213 (15%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLS 96
            A++TGA+ GIG E AR LA+ G R+ L  R+ +      A       G D+  +P D  
Sbjct: 2   VALVTGASRGIGIEIARALARDGYRVSLGLRNPEDLAALSAS------GGDVEAVPYDAR 55

Query: 97  SLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLL 154
                R  V         +++L++NAG          S+  +E  F+ N +    LT+ L
Sbjct: 56  DPEDARALVDALRDRFGRIDVLVHNAGIGRPTTLREGSDAELEAHFSINVIAPAELTRAL 115

Query: 155 LKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLANV 214
           L  + E        GR+V ++S                +S  +        Y+ SK A  
Sbjct: 116 LPALREAGS-----GRVVFLNS----------------LSGKRVLAGNA-GYSASKFALR 153

Query: 215 LHTKELAQRLKQMEANVTVNCVHPGIVRTRLTR 247
                L Q        V+  C  PG V T + +
Sbjct: 154 ALAHALRQEGWDHGVRVSAVC--PGFVDTPMAQ 184

This subgroup includes Anabaena sp. strain PCC 7120 HetN, a putative oxidoreductase involved in heterocyst differentiation, and related proteins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 223

>gnl|CDD|215720 pfam00106, adh_short, short chain dehydrogenase

 Score = 88.4 bits (220), Expect = 4e-21
 Identities = 40/145 (27%), Positives = 63/145 (43%), Gaps = 16/145 (11%)

Query: 37  TAIITGATSGIGAETARVLAKRGAR-LVLPARSLKA--AEEAKARLASDCPGSDIVVLPL 93
           T +ITG T G+G   AR LA  GAR LVL +R   A  A E  A L +   G+++ V   
Sbjct: 2   TVLITGGTGGLGLALARWLAAEGARHLVLVSRRGPAPGAAELVAELEAL--GAEVTVAAC 59

Query: 94  DLSSLSSVRNFVSQFHSLNLPLNLLINNAG--KFAHQHAISEDGIEMTFATNYLGHFLLT 151
           D++   ++   ++   +   PL+ +++NAG         ++ +  E   A    G + L 
Sbjct: 60  DVADRDALAALLAALPAALGPLDGVVHNAGVLDDGPLEELTPERFERVLAPKVTGAWNLH 119

Query: 152 KLLLKKMIETAKATGIQGRIVNVSS 176
           +L               G  V  SS
Sbjct: 120 ELTRDL---------DLGAFVLFSS 135

This family contains a wide variety of dehydrogenases. Length = 167

>gnl|CDD|187620 cd05362, THN_reductase-like_SDR_c, tetrahydroxynaphthalene/trihydroxynaphthalene reductase-like, classical (c) SDRs

 Score = 90.0 bits (224), Expect = 4e-21
 Identities = 64/217 (29%), Positives = 94/217 (43%), Gaps = 31/217 (14%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLP-ARSLKAAEEAKARLASDCPGSDIVVLPLDL 95
            A++TGA+ GIG   A+ LA+ GA +V+  A S  AAEE  A + +   G   + +  D+
Sbjct: 5   VALVTGASRGIGRAIAKRLARDGASVVVNYASSKAAAEEVVAEIEAA--GGKAIAVQADV 62

Query: 96  SSLSSVRNFVSQFHSLNLPLNLLINNAG--KFAHQHAISEDGIEMTFATNYLGHFLLTKL 153
           S  S V             +++L+NNAG          SE+  +  F  N  G F + + 
Sbjct: 63  SDPSQVARLFDAAEKAFGGVDILVNNAGVMLKKPIAETSEEEFDRMFTVNTKGAFFVLQ- 121

Query: 154 LLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLAN 213
                 E AK     GRI+N+SSS+               + N   Y  ++A A+     
Sbjct: 122 ------EAAKRLRDGGRIINISSSL-----------TAAYTPNYGAYAGSKA-AVEAFTR 163

Query: 214 VLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRERE 250
           VL  KEL  R       +TVN V PG V T +    +
Sbjct: 164 VL-AKELGGR------GITVNAVAPGPVDTDMFYAGK 193

1,3,6,8-tetrahydroxynaphthalene reductase (4HNR) of Magnaporthe grisea and the related 1,3,8-trihydroxynaphthalene reductase (3HNR) are typical members of the SDR family containing the canonical glycine rich NAD(P)-binding site and active site tetrad, and function in fungal melanin biosynthesis. This subgroup also includes an SDR from Norway spruce that may function to protect against both biotic and abitoic stress. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

>gnl|CDD|187598 cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hydroxysteroid dehydrogenase XI-like, classical (c) SDRs

 Score = 89.6 bits (223), Expect = 6e-21
 Identities = 60/215 (27%), Positives = 81/215 (37%), Gaps = 29/215 (13%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLS 96
             +ITG  SGIG   A   AKRGA++V+   + K AEE    +     G  +     D+S
Sbjct: 1   IVLITGGGSGIGRLLALEFAKRGAKVVILDINEKGAEETANNVRK--AGGKVHYYKCDVS 58

Query: 97  SLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAISE---DGIEMTFATNYLGHFLLTKL 153
               V     +       + +LINNAG       + E   + IE TF  N L HF  TK 
Sbjct: 59  KREEVYEAAKKIKKEVGDVTILINNAG-VVSGKKLLELPDEEIEKTFEVNTLAHFWTTKA 117

Query: 154 LLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLAN 213
            L  M+E        G IV ++S              G IS           Y  SK A 
Sbjct: 118 FLPDMLERN-----HGHIVTIASV------------AGLISPAG-----LADYCASKAAA 155

Query: 214 VLHTKELAQRLKQMEA-NVTVNCVHPGIVRTRLTR 247
           V   + L   LK      +    V P  + T + +
Sbjct: 156 VGFHESLRLELKAYGKPGIKTTLVCPYFINTGMFQ 190

17-beta-hydroxysteroid dehydrogenases (17betaHSD) are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. 17betaHSD type XI, a classical SDR, preferentially converts 3alpha-adiol to androsterone but not numerous other tested steroids. This subgroup of classical SDRs also includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 243

>gnl|CDD|181295 PRK08213, PRK08213, gluconate 5-dehydrogenase; Provisional

 Score = 88.8 bits (221), Expect = 2e-20
 Identities = 65/220 (29%), Positives = 103/220 (46%), Gaps = 27/220 (12%)

Query: 32  NLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVL 91
           +LS  TA++TG + G+G + A  L + GAR+VL AR  +  EEA A L +   G D + +
Sbjct: 9   DLSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEAL--GIDALWI 66

Query: 92  PLDLSSLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAISED----GIEMTFATNYLGH 147
             D++  + +     +       +++L+NNAG  A   A +ED      +     N  G 
Sbjct: 67  AADVADEADIERLAEETLERFGHVDILVNNAG--ATWGAPAEDHPVEAWDKVMNLNVRGL 124

Query: 148 FLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYA 207
           FLL++ + K+ +         GRI+NV+S          +  LG    N      T AY 
Sbjct: 125 FLLSQAVAKRSMIPRGY----GRIINVAS----------VAGLGG---NPPEVMDTIAYN 167

Query: 208 LSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTR 247
            SK A +  T+ LA   +     + VN + PG   T++TR
Sbjct: 168 TSKGAVINFTRALA--AEWGPHGIRVNAIAPGFFPTKMTR 205

Length = 259

>gnl|CDD|187622 cd05364, SDR_c11, classical (c) SDR, subgroup 11

 Score = 87.9 bits (218), Expect = 3e-20
 Identities = 72/250 (28%), Positives = 102/250 (40%), Gaps = 37/250 (14%)

Query: 33  LSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEE-AKARLASDCPGSDIVVL 91
           LS   AIITG++SGIGA TA + A+ GARL L  R  +  EE  ++ L +      I+++
Sbjct: 1   LSGKVAIITGSSSGIGAGTAILFARLGARLALTGRDAERLEETRQSCLQAGVSEKKILLV 60

Query: 92  PLDLSSLSSVRNFVSQ----FHSLNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYL 145
             DL+        +S     F      L++L+NNAG  A         +  +     N  
Sbjct: 61  VADLTEEEGQDRIISTTLAKFGR----LDILVNNAGILAKGGGEDQDIEEYDKVMNLNLR 116

Query: 146 GHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRA 205
               LTKL +  +I+T      +G IVNVSS                       +     
Sbjct: 117 AVIYLTKLAVPHLIKT------KGEIVNVSSVA-----------------GGRSFPGVLY 153

Query: 206 YALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSKLL 265
           Y +SK A    T+  A  L      V VN V PG++ T   R R G   +      S+  
Sbjct: 154 YCISKAALDQFTRCTALELAPK--GVRVNSVSPGVIVTGFHR-RMGMPEEQYIKFLSRAK 210

Query: 266 KTIPQGAATT 275
           +T P G   T
Sbjct: 211 ETHPLGRPGT 220

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 253

>gnl|CDD|187605 cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs

 Score = 87.8 bits (218), Expect = 4e-20
 Identities = 62/246 (25%), Positives = 101/246 (41%), Gaps = 41/246 (16%)

Query: 32  NLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVL 91
           +L    A++TGA+ GIG   A  LA+ GA +V+ +R+ + AEEA+  +  +  G +    
Sbjct: 2   SLKGKVALVTGASRGIGFGIASGLAEAGANIVINSRNEEKAEEAQQLIEKE--GVEATAF 59

Query: 92  PLDLSSLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAISEDGIEM---TFATNYLGHF 148
             D+S   +++  V         +++L+NNAG    +H   E            N  G F
Sbjct: 60  TCDVSDEEAIKAAVEAIEEDFGKIDILVNNAG-IIRRHPAEEFPEAEWRDVIDVNLNGVF 118

Query: 149 LLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYAL 208
            +++ + + MI+        G+I+N+  S+ S   G  +                 AYA 
Sbjct: 119 FVSQAVARHMIKQG-----HGKIINI-CSLLSELGGPPV----------------PAYAA 156

Query: 209 SKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLT---REREGFITDLVFFLTSKLL 265
           SK      TK LA    +    + VN + PG   T +T        F           +L
Sbjct: 157 SKGGVAGLTKALATEWAR--HGIQVNAIAPGYFATEMTEAVVADPEF--------NDDIL 206

Query: 266 KTIPQG 271
           K IP G
Sbjct: 207 KRIPAG 212

Ga5DH catalyzes the NADP-dependent conversion of carbon source D-gluconate and 5-keto-D-gluconate. This SDR subgroup has a classical Gly-rich NAD(P)-binding motif and a conserved active site tetrad pattern. However, it has been proposed that Arg104 (Streptococcus suis Ga5DH numbering), as well as an active site Ca2+, play a critical role in catalysis. In addition to Ga5DHs this subgroup contains Erwinia chrysanthemi KduD which is involved in pectin degradation, and is a putative 2,5-diketo-3-deoxygluconate dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107,15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|187584 cd05323, ADH_SDR_c_like, insect type alcohol dehydrogenase (ADH)-like, classical (c) SDRs

 Score = 87.0 bits (216), Expect = 6e-20
 Identities = 60/214 (28%), Positives = 84/214 (39%), Gaps = 30/214 (14%)

Query: 38  AIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSS 97
           AIITG  SGIG  TA++L K+GA++ +  R+      A A L +  P      +  D++S
Sbjct: 3   AIITGGASGIGLATAKLLLKKGAKVAILDRNENP--GAAAELQAINPKVKATFVQCDVTS 60

Query: 98  LSSVRNFVSQFHSLNLPLNLLINNAG----KFAHQHAISEDGIEMTFATNYLGHFLLTKL 153
              +     +       +++LINNAG    K            E T   N  G    T L
Sbjct: 61  WEQLAAAFKKAIEKFGRVDILINNAGILDEKSYLFAGKLPPPWEKTIDVNLTGVINTTYL 120

Query: 154 LLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRA--YALSKL 211
            L  M +     G  G IVN+ S                       Y A +   Y+ SK 
Sbjct: 121 ALHYMDKNKGGKG--GVIVNIGSVA-------------------GLYPAPQFPVYSASKH 159

Query: 212 ANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRL 245
             V  T+ LA  L+  +  V VN + PG   T L
Sbjct: 160 GVVGFTRSLADLLE-YKTGVRVNAICPGFTNTPL 192

This subgroup contains insect type ADH, and 15-hydroxyprostaglandin dehydrogenase (15-PGDH) type I; these proteins are classical SDRs. ADH catalyzes the NAD+-dependent oxidation of alcohols to aldehydes/ketones. This subgroup is distinct from the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase/reductase family, and evolved in fruit flies to allow the digestion of fermenting fruit. 15-PGDH catalyzes the NAD-dependent interconversion of (5Z,13E)-(15S)-11alpha,15-dihydroxy-9-oxoprost-13-enoate and (5Z,13E)-11alpha-hydroxy-9,15-dioxoprost-13-enoate, and has a typical SDR glycine-rich NAD-binding motif, which is not fully present in ADH. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244

>gnl|CDD|183833 PRK12939, PRK12939, short chain dehydrogenase; Provisional

 Score = 86.6 bits (215), Expect = 8e-20
 Identities = 59/217 (27%), Positives = 90/217 (41%), Gaps = 28/217 (12%)

Query: 32  NLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVL 91
           NL+   A++TGA  G+GA  A  LA+ GA +         A E  A L +   G     +
Sbjct: 4   NLAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEA--AGGRAHAI 61

Query: 92  PLDLSSLSSVRNFVSQFHSLNLPLNLLINNAG--KFAHQHAISEDGIEMTFATNYLGHFL 149
             DL+  +SV+ F     +    L+ L+NNAG         +  D  +     N  G FL
Sbjct: 62  AADLADPASVQRFFDAAAAALGGLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFL 121

Query: 150 LTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALS 209
           + +  L  + ++ +     GRIVN++S    W      +                AY  S
Sbjct: 122 MLRAALPHLRDSGR-----GRIVNLASDTALW---GAPKLG--------------AYVAS 159

Query: 210 KLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLT 246
           K A +  T+ LA+ L      +TVN + PG+  T  T
Sbjct: 160 KGAVIGMTRSLARELG--GRGITVNAIAPGLTATEAT 194

Length = 250

>gnl|CDD|235924 PRK07063, PRK07063, short chain dehydrogenase; Provisional

 Score = 85.1 bits (211), Expect = 4e-19
 Identities = 65/223 (29%), Positives = 105/223 (47%), Gaps = 34/223 (15%)

Query: 31  PNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVV 90
             L+   A++TGA  GIGA  AR  A+ GA + L       AE A A +A D  G+ ++ 
Sbjct: 3   NRLAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLA 62

Query: 91  LPLDLSSLSSVRNFVSQFHSLNLPLNLLINNAGK--FAHQHAISEDGIEMTFATNYLGHF 148
           +P D++  +SV   V+       PL++L+NNAG   FA   A++++     FA +  G +
Sbjct: 63  VPADVTDAASVAAAVAAAEEAFGPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAW 122

Query: 149 LLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYAL 208
              + +L  M+E  +     G IVN++S+ H++          +I            Y +
Sbjct: 123 NGCRAVLPGMVERGR-----GSIVNIAST-HAF----------KIIPG------CFPYPV 160

Query: 209 SKLANVLHTK----ELAQRLKQMEANVTVNCVHPGIVRTRLTR 247
           +K   +  T+    E A R      NV VN + PG + T+LT 
Sbjct: 161 AKHGLLGLTRALGIEYAAR------NVRVNAIAPGYIETQLTE 197

Length = 260

>gnl|CDD|211705 TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase

 Score = 84.7 bits (210), Expect = 5e-19
 Identities = 74/279 (26%), Positives = 116/279 (41%), Gaps = 49/279 (17%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLS 96
           TA++TGA SGIG   AR LA  GA +V+     + AE A         G  ++ LP D++
Sbjct: 3   TALVTGAASGIGLAIARALAAAGANVVVNDFGEEGAEAAAKVAGDA--GGSVIYLPADVT 60

Query: 97  SLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAISE---DGIEMTFATNYLGHFLLTKL 153
               + + ++   +    L++L+NNAG   H   I E   +  +   A      F   + 
Sbjct: 61  KEDEIADMIAAAAAEFGGLDILVNNAG-IQHVAPIEEFPPEDWDRIIAVMLTSAFHTIRA 119

Query: 154 LLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLAN 213
            L  M    K  G  GRI+N+ +S H   +          S  KS Y A + + L  L  
Sbjct: 120 ALPHM----KKQG-WGRIINI-ASAHGLVA----------SPFKSAYVAAK-HGLIGLTK 162

Query: 214 VLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRE------------REGFITDLVFFLT 261
           VL   E+A+        +TVN + PG VRT L  +             E  I +++    
Sbjct: 163 VL-ALEVAE------HGITVNAICPGYVRTPLVEKQIADQAKTRGIPEEQVIREVMLKGQ 215

Query: 262 -SKLLKTIPQGAATTCYVAIHP------RLVNVSGKYFA 293
            +K   T+ + A T  Y+A         + + + G + A
Sbjct: 216 PTKRFVTVDEVAETALYLASDAAAQITGQAIVLDGGWTA 254

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. Length = 255

>gnl|CDD|187628 cd05370, SDR_c2, classical (c) SDR, subgroup 2

 Score = 83.9 bits (208), Expect = 5e-19
 Identities = 66/224 (29%), Positives = 89/224 (39%), Gaps = 36/224 (16%)

Query: 32  NLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVL 91
            L+  T +ITG TSGIG   AR   + G  +++  R  +   EAK  L    P    +V 
Sbjct: 2   KLTGNTVLITGGTSGIGLALARKFLEAGNTVIITGRREERLAEAKKEL----PNIHTIV- 56

Query: 92  PLDLSSLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQH----AISEDGIEMTFATNYLGH 147
            LD+    SV        S    L++LINNAG          A   D  +    TN +G 
Sbjct: 57  -LDVGDAESVEALAEALLSEYPNLDILINNAGIQRPIDLRDPASDLDKADTEIDTNLIGP 115

Query: 148 FLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKS-HYDATRAY 206
             L K  L  + +  +AT     IVNVSS             L  +    +  Y AT+A 
Sbjct: 116 IRLIKAFLPHLKKQPEAT-----IVNVSSG------------LAFVPMAANPVYCATKAA 158

Query: 207 ALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRERE 250
                   LH+  LA R +  +  V V  + P  V T L  ER 
Sbjct: 159 --------LHSYTLALRHQLKDTGVEVVEIVPPAVDTELHEERR 194

Short-chain dehydrogenases/reductases (SDRs, aka Tyrosine-dependent oxidoreductases) are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 228

>gnl|CDD|237100 PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenase; Provisional

 Score = 84.2 bits (209), Expect = 7e-19
 Identities = 68/224 (30%), Positives = 100/224 (44%), Gaps = 40/224 (17%)

Query: 32  NLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVL 91
            L    A++TGA SGIG E A  LAK GA++V+   + +AA  A   L     G   + +
Sbjct: 1   MLKGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQK--AGGKAIGV 58

Query: 92  PLDLSSLSSVRNF----VSQFHSLNLPLNLLINNAGKFAHQHAISE---DGIEMTFATNY 144
            +D++   ++       V  F      +++L+NNAG   H   I +   +  +   A   
Sbjct: 59  AMDVTDEEAINAGIDYAVETFGG----VDILVNNAG-IQHVAPIEDFPTEKWKKMIAIML 113

Query: 145 LGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQI-SRNKSHYDAT 203
            G FL TK  L  M    KA G  GRI+N+ +S+H           G + S  K+ Y + 
Sbjct: 114 DGAFLTTKAALPIM----KAQG-GGRIINM-ASVH-----------GLVGSAGKAAYVSA 156

Query: 204 RAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTR 247
           + + L  L  V+   E A         VTVN + PG V T L R
Sbjct: 157 K-HGLIGLTKVV-ALEGATH------GVTVNAICPGYVDTPLVR 192

Length = 258

>gnl|CDD|183778 PRK12829, PRK12829, short chain dehydrogenase; Provisional

 Score = 84.3 bits (209), Expect = 8e-19
 Identities = 60/218 (27%), Positives = 85/218 (38%), Gaps = 30/218 (13%)

Query: 33  LSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLP 92
           L  +  ++TG  SGIG   A   A+ GAR+ +   S  A     ARL    PG+ +    
Sbjct: 9   LDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARL----PGAKVTATV 64

Query: 93  LDLSSLSSVRNFVSQFHSLNLPLNLLINNAGKFAH---QHAISEDGIEMTFATNYLGHFL 149
            D++  + V             L++L+NNAG          I+ +  E T A N  G F 
Sbjct: 65  ADVADPAQVERVFDTAVERFGGLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFY 124

Query: 150 LTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALS 209
             +  +  +    KA+G  G I+ +SS                    +  Y     YA S
Sbjct: 125 FARAAVPLL----KASGHGGVIIALSSVA-----------------GRLGYPGRTPYAAS 163

Query: 210 KLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTR 247
           K A V   K LA  L      + VN + PGIVR    R
Sbjct: 164 KWAVVGLVKSLAIELG--PLGIRVNAILPGIVRGPRMR 199

Length = 264

>gnl|CDD|187609 cd05351, XR_like_SDR_c, xylulose reductase-like, classical (c) SDRs

 Score = 83.7 bits (207), Expect = 9e-19
 Identities = 63/218 (28%), Positives = 101/218 (46%), Gaps = 35/218 (16%)

Query: 32  NLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVL 91
           + +   A++TGA  GIG  T + LAK GAR+V  +R+    +     L  +CPG  I  +
Sbjct: 4   DFAGKRALVTGAGKGIGRATVKALAKAGARVVAVSRT----QADLDSLVRECPG--IEPV 57

Query: 92  PLDLSSLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFL 149
            +DLS   +    +        P++LL+NNA     Q    ++++  + +F  N      
Sbjct: 58  CVDLSDWDATEEALGSVG----PVDLLVNNAAVAILQPFLEVTKEAFDRSFDVNVRAVIH 113

Query: 150 LTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALS 209
           +++++ + MI    A G+ G IVNVSS           R L     N + Y +T+A AL 
Sbjct: 114 VSQIVARGMI----ARGVPGSIVNVSSQASQ-------RALT----NHTVYCSTKA-ALD 157

Query: 210 KLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTR 247
            L  V+   EL          + VN V+P +V T + R
Sbjct: 158 MLTKVM-ALELGPH------KIRVNSVNPTVVMTDMGR 188

Members of this subgroup include proteins identified as L-xylulose reductase (XR) and carbonyl reductase; they are members of the SDR family. XR, catalyzes the NADP-dependent reduction of L-xyulose and other sugars. Tetrameric mouse carbonyl reductase is involved in the metabolism of biogenic and xenobiotic carbonyl compounds. This subgroup also includes tetrameric chicken liver D-erythrulose reductase, which catalyzes the reduction of D-erythrulose to D-threitol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 244

>gnl|CDD|187625 cd05367, SPR-like_SDR_c, sepiapterin reductase (SPR)-like, classical (c) SDRs

 Score = 83.5 bits (207), Expect = 1e-18
 Identities = 63/217 (29%), Positives = 88/217 (40%), Gaps = 33/217 (15%)

Query: 37  TAIITGATSGIGAETARVLAKRG--ARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLD 94
             I+TGA+ GIG   A  L KRG  + +VL ARS +  +E K  L    PG  +  +  D
Sbjct: 1   VIILTGASRGIGRALAEELLKRGSPSVVVLLARSEEPLQELKEEL---RPGLRVTTVKAD 57

Query: 95  LSSLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAI---SEDGIEMTFATNYLGHFLLT 151
           LS  + V   +     L+   +LLINNAG       I     D ++  F  N      LT
Sbjct: 58  LSDAAGVEQLLEAIRKLDGERDLLINNAGSLGPVSKIEFIDLDELQKYFDLNLTSPVCLT 117

Query: 152 KLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKL 211
             LL+   +     G++  +VNVS       SG  +            +     Y  SK 
Sbjct: 118 STLLRAFKK----RGLKKTVVNVS-------SGAAVNP----------FKGWGLYCSSKA 156

Query: 212 ANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRE 248
           A  +  + LA         V V    PG+V T + RE
Sbjct: 157 ARDMFFRVLAAEEPD----VRVLSYAPGVVDTDMQRE 189

Human SPR, a member of the SDR family, catalyzes the NADP-dependent reduction of sepiaptern to 7,8-dihydrobiopterin (BH2). In addition to SPRs, this subgroup also contains Bacillus cereus yueD, a benzil reductase, which catalyzes the stereospecific reduction of benzil to (S)-benzoin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 241

>gnl|CDD|180723 PRK06841, PRK06841, short chain dehydrogenase; Provisional

 Score = 81.6 bits (202), Expect = 6e-18
 Identities = 64/216 (29%), Positives = 96/216 (44%), Gaps = 31/216 (14%)

Query: 32  NLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVL 91
           +LS   A++TG  SGIG   A + A +GAR+ L  RS     E  A+L       +   L
Sbjct: 12  DLSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSE-DVAEVAAQLLGG----NAKGL 66

Query: 92  PLDLSSLSSVRNFVSQFHSLNLPLNLLINNAG--KFAHQHAISEDGIEMTFATNYLGHFL 149
             D+S   SV   V+   S    +++L+N+AG    A    +SE+  + T   N  G FL
Sbjct: 67  VCDVSDSQSVEAAVAAVISAFGRIDILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFL 126

Query: 150 LTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALS 209
           + + + + MI         G+IVN++S              G ++      +   AY  S
Sbjct: 127 MAQAVGRHMIAAG-----GGKIVNLASQA------------GVVA-----LERHVAYCAS 164

Query: 210 KLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRL 245
           K   V  TK LA  L+     +TVN + P +V T L
Sbjct: 165 KAGVVGMTKVLA--LEWGPYGITVNAISPTVVLTEL 198

Length = 255

>gnl|CDD|187616 cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (GlcDH), classical (c) SDRs

 Score = 80.5 bits (199), Expect = 1e-17
 Identities = 66/239 (27%), Positives = 98/239 (41%), Gaps = 31/239 (12%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLS 96
            A++TGA+SGIG   A  LA  GA +V+  RS + A E          G  I V   D+S
Sbjct: 5   VALVTGASSGIGKAIAIRLATAGANVVVNYRSKEDAAEEVVEEIKAVGGKAIAV-QADVS 63

Query: 97  SLSSVRNFVSQFHSLNLPLNLLINNAG--KFAHQHAISEDGIEMTFATNYLGHFLLTKLL 154
               V             L++L+NNAG    A  H ++ +        N  G FL  +  
Sbjct: 64  KEEDVVALFQSAIKEFGTLDILVNNAGLQGDASSHEMTLEDWNKVIDVNLTGQFLCAREA 123

Query: 155 LKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLANV 214
           +K+  ++     I+G+I+N+ SS+H     + I + G +            YA SK    
Sbjct: 124 IKRFRKSK----IKGKIINM-SSVH-----EKIPWPGHV-----------NYAASKGGVK 162

Query: 215 LHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSKLLKTIPQGAA 273
           + TK LAQ        + VN + PG + T +  E             + LL  IP G  
Sbjct: 163 MMTKTLAQEYA--PKGIRVNAIAPGAINTPINAEAWDDPEQR-----ADLLSLIPMGRI 214

GlcDH, is a tetrameric member of the SDR family, it catalyzes the NAD(P)-dependent oxidation of beta-D-glucose to D-glucono-delta-lactone. GlcDH has a typical NAD-binding site glycine-rich pattern as well as the canonical active site tetrad (YXXXK motif plus upstream Ser and Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|187654 cd08951, DR_C-13_KR_SDR_c_like, daunorubicin C-13 ketoreductase (KR), classical (c)-like SDRs

 Score = 80.6 bits (199), Expect = 2e-17
 Identities = 80/283 (28%), Positives = 119/283 (42%), Gaps = 41/283 (14%)

Query: 40  ITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLS 99
           ITG++ G+G   AR L  +G  +VL ARS K A +AKA     CPG+  V++  DLSSL+
Sbjct: 12  ITGSSDGLGLAAARTLLHQGHEVVLHARSQKRAADAKA----ACPGAAGVLIG-DLSSLA 66

Query: 100 SVRNFVSQFHSLNLPLNLLINNAGKF-AHQHAISEDGIEMTFATNYLGHFLLTKLLLKKM 158
             R    Q +++    + +I+NAG          + GI    A N L  ++LT L+ +  
Sbjct: 67  ETRKLADQVNAIG-RFDAVIHNAGILSGPNRKTPDTGIPAMVAVNVLAPYVLTALIRRPK 125

Query: 159 IETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLANVLHTK 218
                      R++ +SS +H    G+    L  I       + + AY+ SKL  +    
Sbjct: 126 -----------RLIYLSSGMHR--GGNA--SLDDIDWFNRGENDSPAYSDSKLHVLTLAA 170

Query: 219 ELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVF-FLTSKLLKTIPQGAATTCY 277
            +A+R K    +V+ N VHPG V T++     G   DL    LT   L       A    
Sbjct: 171 AVARRWK----DVSSNAVHPGWVPTKMG--GAGAPDDLEQGHLTQVWLAESDDPQA---- 220

Query: 278 VAIHPRLVNVSGKYFADCNEAWTSKLGSNSNEASRLWAASELL 320
                     SG YF             +S    +L  A E +
Sbjct: 221 --------LTSGGYFYHRRLQEPHPASEDSRLQEKLVQALEEV 255

Daunorubicin is a clinically important therapeutic compound used in some cancer treatments. Daunorubicin C-13 ketoreductase is member of the classical SDR family with a canonical glycine-rich NAD(P)-binding motif, but lacking a complete match to the active site tetrad characteristic of this group. The critical Tyr, plus the Lys and upstream Asn are present, but the catalytic Ser is replaced, generally by Gln. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 260

>gnl|CDD|187635 cd08930, SDR_c8, classical (c) SDR, subgroup 8

 Score = 79.3 bits (196), Expect = 4e-17
 Identities = 51/209 (24%), Positives = 87/209 (41%), Gaps = 22/209 (10%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLS 96
             +ITGA   IG    + L   GARL+L   +  A E+ K  L +    + ++ L LD++
Sbjct: 4   IILITGAAGLIGKAFCKALLSAGARLILADINAPALEQLKEELTNL-YKNRVIALELDIT 62

Query: 97  SLSSVRNFVSQFHSLNLPLNLLINNAG-----KFAHQHAISEDGIEMTFATNYLGHFLLT 151
           S  S++  +  +      +++LINNA        +       +        N  G FL +
Sbjct: 63  SKESIKELIESYLEKFGRIDILINNAYPSPKVWGSRFEEFPYEQWNEVLNVNLGGAFLCS 122

Query: 152 KLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKL 211
           +  +K   +  K     G I+N+ +SI+   + D  R                 Y++ K 
Sbjct: 123 QAFIKLFKKQGK-----GSIINI-ASIYGVIAPDF-RIYENTQMYSP-----VEYSVIK- 169

Query: 212 ANVLH-TKELAQRLKQMEANVTVNCVHPG 239
           A ++H TK LA+        + VN + PG
Sbjct: 170 AGIIHLTKYLAKYYADT--GIRVNAISPG 196

This subgroup has a fairly well conserved active site tetrad and domain size of the classical SDRs, but has an atypical NAD-binding motif ([ST]G[GA]XGXXG). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|187587 cd05326, secoisolariciresinol-DH_like_SDR_c, secoisolariciresinol dehydrogenase (secoisolariciresinol-DH)-like, classical (c) SDRs

 Score = 79.0 bits (195), Expect = 5e-17
 Identities = 72/224 (32%), Positives = 98/224 (43%), Gaps = 32/224 (14%)

Query: 32  NLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVL 91
            L    AIITG  SGIG  TAR+ AK GAR+V+        ++A   +A++    DI  +
Sbjct: 1   RLDGKVAIITGGASGIGEATARLFAKHGARVVI----ADIDDDAGQAVAAELGDPDISFV 56

Query: 92  PLDLSSLSSVRNFVSQFHSLNLPLNLLINNAGKF-AHQHAISE---DGIEMTFATNYLGH 147
             D++  + VR  V    +    L+++ NNAG   A  ++I E   +  E     N  G 
Sbjct: 57  HCDVTVEADVRAAVDTAVARFGRLDIMFNNAGVLGAPCYSILETSLEEFERVLDVNVYGA 116

Query: 148 FLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYA 207
           FL TK   + MI   K     G IV+V +S+     G     LG       H     AY 
Sbjct: 117 FLGTKHAARVMIPAKK-----GSIVSV-ASVAGVVGG-----LG------PH-----AYT 154

Query: 208 LSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREG 251
            SK A +  T+  A  L   E  + VNCV P  V T L     G
Sbjct: 155 ASKHAVLGLTRSAATELG--EHGIRVNCVSPYGVATPLLTAGFG 196

Podophyllum secoisolariciresinol-DH is a homo tetrameric, classical SDR that catalyzes the NAD-dependent conversion of (-)-secoisolariciresinol to (-)-matairesinol via a (-)-lactol intermediate. (-)-Matairesinol is an intermediate to various 8'-lignans, including the cancer-preventive mammalian lignan, and those involved in vascular plant defense. This subgroup also includes rice momilactone A synthase which catalyzes the conversion of 3beta-hydroxy-9betaH-pimara-7,15-dien-19,6beta-olide into momilactone A, Arabidopsis ABA2 which during abscisic acid (ABA) biosynthesis, catalyzes the conversion of xanthoxin to abscisic aldehyde and, maize Tasselseed2 which participate in the maize sex determination pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249

>gnl|CDD|187601 cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, classical (c) SDRs

 Score = 78.7 bits (194), Expect = 6e-17
 Identities = 53/210 (25%), Positives = 94/210 (44%), Gaps = 25/210 (11%)

Query: 38  AIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSS 97
           A++TGA+ GIGA  AR L + G ++V  AR +   E   A   S    + +     DLS+
Sbjct: 9   ALVTGASVGIGAAVARALVQHGMKVVGCARRVDKIEALAAECQSAGYPT-LFPYQCDLSN 67

Query: 98  LSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAISE---DGIEMTFATNYLGHFLLTKLL 154
              + +  S   + +  +++ INNAG  A    +     +G +  F  N L   + T+  
Sbjct: 68  EEQILSMFSAIRTQHQGVDVCINNAG-LARPEPLLSGKTEGWKEMFDVNVLALSICTREA 126

Query: 155 LKKMIETAKATGI-QGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLAN 213
            + M    K   +  G I+N++S      SG  +        +  H+ A   +A++ L  
Sbjct: 127 YQSM----KERNVDDGHIININS-----MSGHRV-----PPVSVFHFYAATKHAVTAL-- 170

Query: 214 VLHTKELAQRLKQMEANVTVNCVHPGIVRT 243
              T+ L Q L++ + ++    + PG+V T
Sbjct: 171 ---TEGLRQELREAKTHIRATSISPGLVET 197

Human Mgc4172-like proteins, putative SDRs. These proteins are members of the SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|236372 PRK09072, PRK09072, short chain dehydrogenase; Provisional

 Score = 78.8 bits (195), Expect = 6e-17
 Identities = 47/149 (31%), Positives = 64/149 (42%), Gaps = 13/149 (8%)

Query: 32  NLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSD-IVV 90
           +L     ++TGA+ GIG   A  LA  GARL+L  R+     E    LA+  P       
Sbjct: 2   DLKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRN----AEKLEALAARLPYPGRHRW 57

Query: 91  LPLDLSSLSSVRNFVSQFHSLNLPLNLLINNAG--KFAHQHAISEDGIEMTFATNYLGHF 148
           +  DL+S  + R  V         +N+LINNAG   FA       + IE   A N     
Sbjct: 58  VVADLTS-EAGREAVLARAREMGGINVLINNAGVNHFALLEDQDPEAIERLLALNLTAPM 116

Query: 149 LLTKLLLKKMIETAKATGIQGRIVNVSSS 177
            LT+ LL  +     A      +VNV S+
Sbjct: 117 QLTRALLPLLRAQPSAM-----VVNVGST 140

Length = 263

>gnl|CDD|235726 PRK06181, PRK06181, short chain dehydrogenase; Provisional

 Score = 78.9 bits (195), Expect = 7e-17
 Identities = 63/214 (29%), Positives = 92/214 (42%), Gaps = 34/214 (15%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLS 96
             IITGA+ GIG   A  LA+ GA+LVL AR+          LA    G + +V+P D+S
Sbjct: 3   VVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADH--GGEALVVPTDVS 60

Query: 97  SLSSVRNFVSQFHSLNLPLNLLINNAG-----KFAHQHAISEDGIEMTFATNYLGHFLLT 151
              +    +    +    +++L+NNAG     +F     +S    E     NYLG    T
Sbjct: 61  DAEACERLIEAAVARFGGIDILVNNAGITMWSRFDELTDLSV--FERVMRVNYLGAVYCT 118

Query: 152 KLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKL 211
              L  +  +      +G+IV VSS      +G      G  +R+         YA SK 
Sbjct: 119 HAALPHLKAS------RGQIVVVSS-----LAG----LTGVPTRS--------GYAASKH 155

Query: 212 ANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRL 245
           A  LH    + R++  +  V V  V PG V T +
Sbjct: 156 A--LHGFFDSLRIELADDGVAVTVVCPGFVATDI 187

Length = 263

>gnl|CDD|235816 PRK06500, PRK06500, short chain dehydrogenase; Provisional

 Score = 78.5 bits (194), Expect = 7e-17
 Identities = 67/211 (31%), Positives = 93/211 (44%), Gaps = 33/211 (15%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLS 96
           TA+ITG TSGIG ETAR     GAR+ +  R   + E A+A L     G   +V+  D  
Sbjct: 8   TALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAEL-----GESALVIRADAG 62

Query: 97  SLSSVRNFVSQFHSLNLPLNLLINNAG--KFAHQHAISEDGIEMTFATNYLGHFLLTKLL 154
            +++ +            L+ +  NAG  KFA      E   + +F TN  G + L + L
Sbjct: 63  DVAAQKALAQALAEAFGRLDAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQAL 122

Query: 155 LKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLANV 214
           L  +   A    I   ++N S + H          +G    N S Y A++A AL  LA  
Sbjct: 123 LPLL---ANPASI---VLNGSINAH----------IG--MPNSSVYAASKA-ALLSLAKT 163

Query: 215 LHTKELAQRLKQMEANVTVNCVHPGIVRTRL 245
           L   EL  R       + VN V PG V+T L
Sbjct: 164 LSG-ELLPR------GIRVNAVSPGPVQTPL 187

Length = 249

>gnl|CDD|181136 PRK07825, PRK07825, short chain dehydrogenase; Provisional

 Score = 78.8 bits (195), Expect = 8e-17
 Identities = 64/221 (28%), Positives = 88/221 (39%), Gaps = 38/221 (17%)

Query: 31  PNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVV 90
            +L      ITG   GIG  TAR LA  GAR+ +       A+E  A L         V 
Sbjct: 1   DDLRGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELGLV------VG 54

Query: 91  LPLDLSSLSSVRNFVSQFHSLNLPLNLLINNAG-----KFAHQHAISEDGIEMTFATNYL 145
            PLD++  +S   F+    +   P+++L+NNAG      F  +    +         N  
Sbjct: 55  GPLDVTDPASFAAFLDAVEADLGPIDVLVNNAGVMPVGPFLDE---PDAVTRRILDVNVY 111

Query: 146 GHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRA 205
           G  L +KL   +M+   +     G +VNV+S      +G  I   G          AT  
Sbjct: 112 GVILGSKLAAPRMVPRGR-----GHVVNVAS-----LAG-KIPVPGM---------AT-- 149

Query: 206 YALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLT 246
           Y  SK A V  T   A RL+     V V+ V P  V T L 
Sbjct: 150 YCASKHAVVGFTD--AARLELRGTGVHVSVVLPSFVNTELI 188

Length = 273

>gnl|CDD|235631 PRK05866, PRK05866, short chain dehydrogenase; Provisional

 Score = 79.0 bits (195), Expect = 1e-16
 Identities = 61/195 (31%), Positives = 91/195 (46%), Gaps = 23/195 (11%)

Query: 33  LSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLP 92
           L+    ++TGA+SGIG   A   A+RGA +V  AR     +    R+     G D + +P
Sbjct: 38  LTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRA--GGDAMAVP 95

Query: 93  LDLSSLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQH-AISED---GIEMTFATNYLGHF 148
            DLS L +V   V+        +++LINNAG+   +  A S D    +E T   NY    
Sbjct: 96  CDLSDLDAVDALVADVEKRIGGVDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPL 155

Query: 149 LLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYAL 208
            L + L   M+E        G I+NV+    +W        L + S   S Y+A++A AL
Sbjct: 156 RLIRGLAPGMLERGD-----GHIINVA----TW------GVLSEASPLFSVYNASKA-AL 199

Query: 209 SKLANVLHTKELAQR 223
           S ++ V+ T E   R
Sbjct: 200 SAVSRVIET-EWGDR 213

Length = 293

>gnl|CDD|187614 cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxysteroid dehydrogenases (17beta-HSDs) types -1, -3, and -12, -like, classical (c) SDRs

 Score = 77.6 bits (192), Expect = 1e-16
 Identities = 53/219 (24%), Positives = 97/219 (44%), Gaps = 32/219 (14%)

Query: 38  AIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSS 97
           A++TGAT GIG   A  LAKRG  ++L +R+ +  +     +  +  G +   +  D S+
Sbjct: 4   AVVTGATDGIGKAYAEELAKRGFNVILISRTQEKLDAVAKEI-EEKYGVETKTIAADFSA 62

Query: 98  LSSVRNFVSQFHSL-NLPLNLLINNAGKFAHQ----HAISEDGIEMTFATNYLGHFLLTK 152
                 +      L  L + +L+NN G             ED ++     N +    +T+
Sbjct: 63  GDD--IYERIEKELEGLDIGILVNNVGISHSIPEYFLETPEDELQDIINVNVMATLKMTR 120

Query: 153 LLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLA 212
           L+L  M++  K     G IVN+SS     F+G +   L       + Y A++A+ L   +
Sbjct: 121 LILPGMVKRKK-----GAIVNISS-----FAGLIPTPL------LATYSASKAF-LDFFS 163

Query: 213 NVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREG 251
             L+ +E   +       + V  + P +V T++++ R+ 
Sbjct: 164 RALY-EEYKSQ------GIDVQSLLPYLVATKMSKIRKS 195

This subgroup includes various 17-beta-hydroxysteroid dehydrogenases and 3-ketoacyl-CoA reductase, these are members of the SDR family, and contain the canonical active site tetrad and glycine-rich NAD-binding motif of the classical SDRs. 3-ketoacyl-CoA reductase (KAR, aka 17beta-HSD type 12, encoded by HSD17B12) acts in fatty acid elongation; 17beta- hydroxysteroid dehydrogenases are isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. 17beta-estradiol dehydrogenase (aka 17beta-HSD type 1, encoded by HSD17B1) converts estrone to estradiol. Estradiol is the predominant female sex hormone. 17beta-HSD type 3 (aka testosterone 17-beta-dehydrogenase 3, encoded by HSD17B3) catalyses the reduction of androstenedione to testosterone, it also accepts estrogens as substrates. This subgroup also contains a putative steroid dehydrogenase let-767 from Caenorhabditis elegans, mutation in which results in hypersensitivity to cholesterol limitation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239

>gnl|CDD|235990 PRK07326, PRK07326, short chain dehydrogenase; Provisional

 Score = 77.4 bits (191), Expect = 2e-16
 Identities = 56/214 (26%), Positives = 89/214 (41%), Gaps = 30/214 (14%)

Query: 32  NLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVL 91
           +L    A+ITG + GIG   A  L   G ++ + AR  K  EEA A L +     +++ L
Sbjct: 3   SLKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNN---KGNVLGL 59

Query: 92  PLDLSSLSSVRNFVSQFHSLNLPLNLLINNAG--KFAHQHAISEDGIEMTFATNYLGHFL 149
             D+   + V+  V    +    L++LI NAG   FA    ++ +   +   TN  G F 
Sbjct: 60  AADVRDEADVQRAVDAIVAAFGGLDVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAF- 118

Query: 150 LTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALS 209
                +K  +   K  G  G I+N+SS      +G             + +    AY  S
Sbjct: 119 ---YTIKAAVPALKRGG--GYIINISS-----LAG------------TNFFAGGAAYNAS 156

Query: 210 KLANVLHTKELAQRLKQMEANVTVNCVHPGIVRT 243
           K   V  ++     L+Q    + V+ + PG V T
Sbjct: 157 KFGLVGFSEAAMLDLRQ--YGIKVSTIMPGSVAT 188

Length = 237

>gnl|CDD|180744 PRK06914, PRK06914, short chain dehydrogenase; Provisional

 Score = 77.8 bits (192), Expect = 2e-16
 Identities = 42/144 (29%), Positives = 69/144 (47%), Gaps = 12/144 (8%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLS 96
            AI+TGA+SG G  T   LAK+G  ++   R+ +  E   ++        +I V  LD++
Sbjct: 5   IAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVT 64

Query: 97  SLSSVRNFVSQFHSLNLPLNLLINNAGK----FAHQHAISEDGIEMTFATNYLGHFLLTK 152
             +S+ NF      +   ++LL+NNAG     F  +  I  +     F TN  G   +T+
Sbjct: 65  DQNSIHNFQLVLKEIG-RIDLLVNNAGYANGGFVEE--IPVEEYRKQFETNVFGAISVTQ 121

Query: 153 LLLKKMIETAKATGIQGRIVNVSS 176
            +L  M +        G+I+N+SS
Sbjct: 122 AVLPYMRKQKS-----GKIINISS 140

Length = 280

>gnl|CDD|187608 cd05350, SDR_c6, classical (c) SDR, subgroup 6

 Score = 77.0 bits (190), Expect = 2e-16
 Identities = 58/213 (27%), Positives = 90/213 (42%), Gaps = 32/213 (15%)

Query: 38  AIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSS 97
            +ITGA+SGIG   AR  AK G  + L AR     +E KA L +  P   + V  LD++ 
Sbjct: 1   VLITGASSGIGRALAREFAKAGYNVALAARRTDRLDELKAELLNPNPS--VEVEILDVTD 58

Query: 98  LSSVRNFVSQFHSLNLPLNLLINNAG--KFAHQHAISEDGIEMTFATNYLGHFLLTKLLL 155
               +  +++  +    L+L+I NAG  K      +S      T  TN LG   + +  L
Sbjct: 59  EERNQLVIAELEAELGGLDLVIINAGVGKGTSLGDLSFKAFRETIDTNLLGAAAILEAAL 118

Query: 156 KKMIETAKATGIQGRIVNVSS--SIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLAN 213
            +     +     G +V +SS  ++                   + Y A++A ALS LA 
Sbjct: 119 PQFRAKGR-----GHLVLISSVAALRGL-------------PGAAAYSASKA-ALSSLAE 159

Query: 214 VLHTKELAQRLKQMEANVTVNCVHPGIVRTRLT 246
            L       R    +  + V  ++PG + T LT
Sbjct: 160 SL-------RYDVKKRGIRVTVINPGFIDTPLT 185

These proteins are members of the classical SDR family, with a canonical active site tetrad and a fairly well conserved typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239

>gnl|CDD|237188 PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 76.9 bits (190), Expect = 2e-16
 Identities = 51/216 (23%), Positives = 88/216 (40%), Gaps = 27/216 (12%)

Query: 37  TAIITGATSGIGAETARVLAKRG-ARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDL 95
            A++TG   GIG   AR LA  G    +      +     +  L +   G +++  P D+
Sbjct: 4   VALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRAL--GVEVIFFPADV 61

Query: 96  SSLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHA----ISEDGIEMTFATNYLGHFLLT 151
           + LS+    +    +    ++ L+NNAG           ++ +  +   A N  G F LT
Sbjct: 62  ADLSAHEAMLDAAQAAWGRIDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLT 121

Query: 152 KLLLKKMI-ETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSK 210
           + + K+M+ +          IV VSS      +  M      +S N+        Y +SK
Sbjct: 122 QAVAKRMLAQPEPEELPHRSIVFVSSV-----NAIM------VSPNRGE------YCISK 164

Query: 211 LANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLT 246
               +  +  A RL   E  + V  V PG+++T +T
Sbjct: 165 AGLSMAAQLFAARLA--EEGIGVYEVRPGLIKTDMT 198

Length = 256

>gnl|CDD|235962 PRK07201, PRK07201, short chain dehydrogenase; Provisional

 Score = 79.6 bits (197), Expect = 3e-16
 Identities = 47/143 (32%), Positives = 69/143 (48%), Gaps = 13/143 (9%)

Query: 39  IITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSL 98
           +ITGA+SGIG  TA  +A+ GA + L AR+ +A +E  A + +   G        DL+  
Sbjct: 375 LITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRA--KGGTAHAYTCDLTDS 432

Query: 99  SSVRNFVSQFHSLNLPLNLLINNAGK-----FAHQHAISEDGIEMTFATNYLGHFLLTKL 153
           ++V + V    + +  ++ L+NNAG+       +      D  E T A NY G   L   
Sbjct: 433 AAVDHTVKDILAEHGHVDYLVNNAGRSIRRSVENSTDRFHD-YERTMAVNYFGAVRLILG 491

Query: 154 LLKKMIETAKATGIQGRIVNVSS 176
           LL  M E        G +VNVSS
Sbjct: 492 LLPHMRERRF-----GHVVNVSS 509

Length = 657

>gnl|CDD|187644 cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydrogenase (HBDH), classical (c) SDRs

 Score = 76.7 bits (189), Expect = 3e-16
 Identities = 66/214 (30%), Positives = 95/214 (44%), Gaps = 28/214 (13%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLS 96
            A++TG+TSGIG   AR LA  GA +VL      A  EA     +   G  ++    DLS
Sbjct: 4   VALVTGSTSGIGLGIARALAAAGANIVLNGFGDAAEIEAVRAGLAAKHGVKVLYHGADLS 63

Query: 97  SLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAISE---DGIEMTFATNYLGHFLLTKL 153
             +++ + V+        +++L+NNAG   H   I +   +  +   A N    F  T+L
Sbjct: 64  KPAAIEDMVAYAQRQFGGVDILVNNAG-IQHVAPIEDFPTEKWDAIIALNLSAVFHTTRL 122

Query: 154 LLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLAN 213
            L  M    K  G  GRI+N+ +S+H   +          S NKS      AY  +K   
Sbjct: 123 ALPHM----KKQGW-GRIINI-ASVHGLVA----------SANKS------AYVAAKHGV 160

Query: 214 VLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTR 247
           V  TK +A  L+     VT N + PG V T L  
Sbjct: 161 VGLTKVVA--LETAGTGVTCNAICPGWVLTPLVE 192

DHBDH, an NAD+ -dependent enzyme, catalyzes the interconversion of D-3-hydroxybutyrate and acetoacetate. It is a classical SDR, with the canonical NAD-binding motif and active site tetrad. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258

>gnl|CDD|180984 PRK07454, PRK07454, short chain dehydrogenase; Provisional

 Score = 74.2 bits (183), Expect = 2e-15
 Identities = 46/143 (32%), Positives = 62/143 (43%), Gaps = 11/143 (7%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLS 96
            A+ITGA+SGIG  TA   AK G  L L ARS  A E   A L S   G       +DLS
Sbjct: 8   RALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRST--GVKAAAYSIDLS 65

Query: 97  SLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAISE---DGIEMTFATNYLGHFLLTKL 153
           +  ++   +++        ++LINNAG  A+   + E      +     N    F     
Sbjct: 66  NPEAIAPGIAELLEQFGCPDVLINNAG-MAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSA 124

Query: 154 LLKKMIETAKATGIQGRIVNVSS 176
           +L  M          G I+NVSS
Sbjct: 125 VLPGMRARG-----GGLIINVSS 142

Length = 241

>gnl|CDD|237219 PRK12827, PRK12827, short chain dehydrogenase; Provisional

 Score = 74.4 bits (183), Expect = 2e-15
 Identities = 63/243 (25%), Positives = 95/243 (39%), Gaps = 40/243 (16%)

Query: 33  LSSVTAIITGATSGIGAETARVLAKRGARLVL----PARSLKAAEEAKARLASDCPGSDI 88
           L S   +ITG + G+G   A  LA  GA +++    P R    A+   A + +   G   
Sbjct: 4   LDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAA--GGKA 61

Query: 89  VVLPLDLSSLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLG 146
           + L  D+   ++ R  +         L++L+NNAG         +S +  +     N  G
Sbjct: 62  LGLAFDVRDFAATRAALDAGVEEFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDG 121

Query: 147 HFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAY 206
            F +T+  L  MI   +     GRIVN++S      +G      GQ+            Y
Sbjct: 122 FFNVTQAALPPMIRARRG----GRIVNIASV-----AGVR-GNRGQV-----------NY 160

Query: 207 ALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSKLLK 266
           A SK   +  TK LA  L      +TVN V PG + T +               T  LL 
Sbjct: 161 AASKAGLIGLTKTLANELAPR--GITVNAVAPGAINTPMADN---------AAPTEHLLN 209

Query: 267 TIP 269
            +P
Sbjct: 210 PVP 212

Length = 249

>gnl|CDD|236074 PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 74.3 bits (183), Expect = 2e-15
 Identities = 59/219 (26%), Positives = 93/219 (42%), Gaps = 28/219 (12%)

Query: 32  NLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVL 91
           +L    A+ITGA  GIG   A  LAK G  + L AR+ +  +     + +   G  +V+ 
Sbjct: 4   SLQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAY--GVKVVIA 61

Query: 92  PLDLSSLSSVRNFVSQFHSLNLPLNLLINNAG--KFAHQHAISEDGIEMTFATNYLGHFL 149
             D+S    V   + Q  +    +++LINNAG  KF     +     E     N +G + 
Sbjct: 62  TADVSDYEEVTAAIEQLKNELGSIDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYY 121

Query: 150 LTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALS 209
            T+ +L  MIE        G I+N+SS+             GQ          T AY+ S
Sbjct: 122 ATRAVLPSMIERQ-----SGDIINISSTA------------GQ-----KGAAVTSAYSAS 159

Query: 210 KLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRE 248
           K   +  T+ L Q +++   N+ V  + P  V T +  +
Sbjct: 160 KFGVLGLTESLMQEVRK--HNIRVTALTPSTVATDMAVD 196

Length = 239

>gnl|CDD|235925 PRK07067, PRK07067, sorbitol dehydrogenase; Provisional

 Score = 74.3 bits (183), Expect = 2e-15
 Identities = 62/217 (28%), Positives = 92/217 (42%), Gaps = 38/217 (17%)

Query: 33  LSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLP 92
           L    A++TGA SGIG   A      GAR+V+       A  A   +     G   + + 
Sbjct: 4   LQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEI-----GPAAIAVS 58

Query: 93  LDLSSLSSVRNFVSQFHSLNLPLNLLINNAGKF--AHQHAISEDGIEMTFATNYLGHFLL 150
           LD++   S+   V+        +++L NNA  F  A    IS D  +  FA N  G F L
Sbjct: 59  LDVTRQDSIDRIVAAAVERFGGIDILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFL 118

Query: 151 TKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNK----SHYDATRAY 206
            + + + M+E     G  G+I+N++S               Q  R      SHY AT+A 
Sbjct: 119 MQAVARHMVE----QGRGGKIINMAS---------------QAGRRGEALVSHYCATKAA 159

Query: 207 ALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRT 243
            +S      +T+  A  L +   N  VN + PG+V T
Sbjct: 160 VIS------YTQSAALALIRHGIN--VNAIAPGVVDT 188

Length = 257

>gnl|CDD|187597 cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) and human hydroxysteroid dehydrogenase-like protein 2 (HSDL2), classical (c) SDRs

 Score = 74.4 bits (183), Expect = 2e-15
 Identities = 60/231 (25%), Positives = 89/231 (38%), Gaps = 56/231 (24%)

Query: 33  LSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGS------ 86
           LS   A +TGA+ GIG   A  LAK GA +V+ A++   A E     A   PG+      
Sbjct: 1   LSGKVAFVTGASRGIGRAIALRLAKAGATVVVAAKT---ASEGDNGSAKSLPGTIEETAE 57

Query: 87  -------DIVVLPLDLSSLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAISEDGIEMT 139
                    + + +D+     VR  V         L++L+NNAG      AI    +E T
Sbjct: 58  EIEAAGGQALPIVVDVRDEDQVRALVEATVDQFGRLDILVNNAG------AIWLSLVEDT 111

Query: 140 FATNYL--------GHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHS-WFSGDMIRYL 190
            A  +         G +LL++  L  M++       QG I+N+S  +      GD+    
Sbjct: 112 PAKRFDLMQRVNLRGTYLLSQAALPHMVKAG-----QGHILNISPPLSLRPARGDV---- 162

Query: 191 GQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIV 241
                         AYA  K      T  LA  L++    + VN + P   
Sbjct: 163 --------------AYAAGKAGMSRLTLGLAAELRR--HGIAVNSLWPSTA 197

This subgroup includes human DHRS1 and human HSDL2 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. HSDL2 may play a part in fatty acid metabolism, as it is found in peroxisomes. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246

>gnl|CDD|187613 cd05355, SDR_c1, classical (c) SDR, subgroup 1

 Score = 74.3 bits (183), Expect = 3e-15
 Identities = 63/220 (28%), Positives = 91/220 (41%), Gaps = 37/220 (16%)

Query: 33  LSSVTAIITGATSGIGAETARVLAKRGARLV---LPARSLKAAEEAKARLASDCPGSDIV 89
           L    A+ITG  SGIG   A   A+ GA +    LP     A E  K  L  +  G   +
Sbjct: 24  LKGKKALITGGDSGIGRAVAIAFAREGADVAINYLPEEEDDAEETKK--LIEEE-GRKCL 80

Query: 90  VLPLDLSSLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHA----ISEDGIEMTFATNYL 145
           ++P DL   S  R+ V +       L++L+NNA    H       I+ + +E TF TN  
Sbjct: 81  LIPGDLGDESFCRDLVKEVVKEFGKLDILVNNAAYQ-HPQESIEDITTEQLEKTFRTNIF 139

Query: 146 GHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRA 205
             F LTK  L  + + +        I+N +S      S  ++                  
Sbjct: 140 SMFYLTKAALPHLKKGS-------SIINTTSVTAYKGSPHLL-----------------D 175

Query: 206 YALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRL 245
           YA +K A V  T+ L+ +L   E  + VN V PG + T L
Sbjct: 176 YAATKGAIVAFTRGLSLQL--AEKGIRVNAVAPGPIWTPL 213

These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 270

>gnl|CDD|187624 cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol dehydrogenase-like, classical (c) SDRs

 Score = 73.2 bits (180), Expect = 6e-15
 Identities = 56/209 (26%), Positives = 88/209 (42%), Gaps = 26/209 (12%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLS 96
            AIITGA  GIG   A  LA  G  +VL   +L+ A ++  +  S+  G + V +  D++
Sbjct: 4   VAIITGAAQGIGRAIAERLAADGFNIVLADLNLEEAAKSTIQEISE-AGYNAVAVGADVT 62

Query: 97  SLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQH--AISEDGIEMTFATNYLGHFLLTKLL 154
               V   + Q        ++++NNAG         I+E+ ++  +A N  G     +  
Sbjct: 63  DKDDVEALIDQAVEKFGSFDVMVNNAGIAPITPLLTITEEDLKKVYAVNVFGVLFGIQAA 122

Query: 155 LKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLANV 214
            ++  +     G  G+I+N SS              G        +    AY+ SK A  
Sbjct: 123 ARQFKK----LGHGGKIINASSIA------------GVQG-----FPNLGAYSASKFAVR 161

Query: 215 LHTKELAQRLKQMEANVTVNCVHPGIVRT 243
             T+  AQ L      +TVN   PGIV+T
Sbjct: 162 GLTQTAAQELA--PKGITVNAYAPGIVKT 188

2,3-butanediol dehydrogenases (BDHs) catalyze the NAD+ dependent conversion of 2,3-butanediol to acetonin; BDHs are classified into types according to their stereospecificity as to substrates and products. Included in this subgroup are Klebsiella pneumonia meso-BDH which catalyzes meso-2,3-butanediol to D(-)-acetonin, and Corynebacterium glutamicum L-BDH which catalyzes lX+)-2,3-butanediol to L(+)-acetonin. This subgroup is comprised of classical SDRs with the characteristic catalytic triad and NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|187626 cd05368, DHRS6_like_SDR_c, human DHRS6-like, classical (c) SDRs

 Score = 72.9 bits (179), Expect = 6e-15
 Identities = 54/216 (25%), Positives = 84/216 (38%), Gaps = 38/216 (17%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLS 96
            A+IT A  GIG   A   A+ GA ++    +     E K +     PG    V  LD++
Sbjct: 4   VALITAAAQGIGRAIALAFAREGANVIATDIN-----EEKLKELERGPGITTRV--LDVT 56

Query: 97  SLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAI---SEDGIEMTFATNYLGHFLLTKL 153
               V     +       +++L N AG F H  +I    +D  +     N    +L+ K 
Sbjct: 57  DKEQVAALAKEEGR----IDVLFNCAG-FVHHGSILDCEDDDWDFAMNLNVRSMYLMIKA 111

Query: 154 LLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLAN 213
           +L KM+         G I+N+ SS+ S   G   R+                Y+ +K A 
Sbjct: 112 VLPKMLARK-----DGSIINM-SSVASSIKGVPNRF---------------VYSTTKAAV 150

Query: 214 VLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRER 249
           +  TK +A      +  +  N + PG V T    ER
Sbjct: 151 IGLTKSVA--ADFAQQGIRCNAICPGTVDTPSLEER 184

Human DHRS6, and similar proteins. These proteins are classical SDRs, with a canonical active site tetrad and a close match to the typical Gly-rich NAD-binding motif. Human DHRS6 is a cytosolic type 2 (R)-hydroxybutyrate dehydrogenase, which catalyses the conversion of (R)-hydroxybutyrate to acetoacetate. Also included in this subgroup is Escherichia coli UcpA (upstream cys P). Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Note: removed : needed to make this chiodl smaller when drew final trees: rmeoved text form description: Other proteins in this subgroup include Thermoplasma acidophilum aldohexose dehydrogenase, which has high dehydrogenase activity against D-mannose, Bacillus subtilis BacC involved in the biosynthesis of the dipeptide bacilysin and its antibiotic moiety anticapsin, Sphingomonas paucimobilis strain B90 LinC, involved in the degradation of hexachlorocyclohexane isomers...... P). Length = 241

>gnl|CDD|187590 cd05329, TR_SDR_c, tropinone reductase-I and II (TR-1, and TR-II)-like, classical (c) SDRs

 Score = 72.9 bits (179), Expect = 8e-15
 Identities = 63/224 (28%), Positives = 95/224 (42%), Gaps = 41/224 (18%)

Query: 32  NLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVL 91
           NL   TA++TG T GIG      LA  GA +   AR+ K  +E          G  +   
Sbjct: 3   NLEGKTALVTGGTKGIGYAIVEELAGLGAEVYTCARNQKELDECLTEWREK--GFKVEGS 60

Query: 92  PLDLSSLSSVR---NFVSQ-FHSLNLPLNLLINNAGKFAHQHAI--SEDGIEMTFATNYL 145
             D+SS S  +   + V+  F      LN+L+NNAG    + A   +E+   +  +TN+ 
Sbjct: 61  VCDVSSRSERQELMDTVASHFGG---KLNILVNNAGTNIRKEAKDYTEEDYSLIMSTNFE 117

Query: 146 GHFLLTKL---LLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDA 202
             + L++L   LL       KA+G  G IV +SS      +G +    G           
Sbjct: 118 AAYHLSRLAHPLL-------KASG-NGNIVFISS-----VAGVIAVPSGAP--------- 155

Query: 203 TRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLT 246
              Y  +K A    T+ LA   +  + N+ VN V P ++ T L 
Sbjct: 156 ---YGATKGALNQLTRSLA--CEWAKDNIRVNAVAPWVIATPLV 194

This subgroup includes TR-I and TR-II; these proteins are members of the SDR family. TRs catalyze the NADPH-dependent reductions of the 3-carbonyl group of tropinone, to a beta-hydroxyl group. TR-I and TR-II produce different stereoisomers from tropinone, TR-I produces tropine (3alpha-hydroxytropane), and TR-II, produces pseudotropine (sigma-tropine, 3beta-hydroxytropane). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 251

>gnl|CDD|187649 cd08945, PKR_SDR_c, Polyketide ketoreductase, classical (c) SDR

 Score = 72.6 bits (178), Expect = 1e-14
 Identities = 62/221 (28%), Positives = 94/221 (42%), Gaps = 31/221 (14%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLS 96
            A++TGATSGIG   AR L K G R+ + AR  +        L     G +      D+ 
Sbjct: 5   VALVTGATSGIGLAIARRLGKEGLRVFVCARGEEGLATTVKELREA--GVEADGRTCDVR 62

Query: 97  SLSSVRNFVSQFHSLNLPLNLLINNAGKF--AHQHAISEDGIEMTFATNYLGHFLLTKLL 154
           S+  +   V+   +   P+++L+NNAG+        ++++       TN  G F +TK +
Sbjct: 63  SVPEIEALVAAAVARYGPIDVLVNNAGRSGGGATAELADELWLDVVETNLTGVFRVTKEV 122

Query: 155 LKK--MIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLA 212
           LK   M+E        GRI+N++S                 +  K        Y+ SK  
Sbjct: 123 LKAGGMLERGT-----GRIINIAS-----------------TGGKQGVVHAAPYSASKHG 160

Query: 213 NVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLT-REREGF 252
            V  TK L   L +    +TVN V PG V T +    RE +
Sbjct: 161 VVGFTKALGLELAR--TGITVNAVCPGFVETPMAASVREHY 199

Polyketide ketoreductase (KR) is a classical SDR with a characteristic NAD-binding pattern and active site tetrad. Aromatic polyketides include various aromatic compounds of pharmaceutical interest. Polyketide KR, part of the type II polyketide synthase (PKS) complex, is comprised of stand-alone domains that resemble the domains found in fatty acid synthase and multidomain type I PKS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 258

>gnl|CDD|187600 cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score = 72.0 bits (177), Expect = 1e-14
 Identities = 61/220 (27%), Positives = 82/220 (37%), Gaps = 33/220 (15%)

Query: 33  LSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLP 92
           L    AI+TG   G+G   AR+L   GA++VL     +  + A A L     G       
Sbjct: 3   LKGKVAIVTGGARGLGLAHARLLVAEGAKVVLSDILDEEGQAAAAEL-----GDAARFFH 57

Query: 93  LDLSSLSSVRNFVSQFHSLNLPLNLLINNAG----KFAHQHAISEDGIEMTFATNYLGHF 148
           LD++        V         L++L+NNAG           + E         N  G F
Sbjct: 58  LDVTDEDGWTAVVDTAREAFGRLDVLVNNAGILTGGTVETTTLEE--WRRLLDINLTGVF 115

Query: 149 LLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYAL 208
           L T+ ++  M E        G I+N+ SSI     GD                A  AY  
Sbjct: 116 LGTRAVIPPMKEAGG-----GSIINM-SSIEGLV-GD---------------PALAAYNA 153

Query: 209 SKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRE 248
           SK A    TK  A         + VN VHPG + T +T E
Sbjct: 154 SKGAVRGLTKSAALECATQGYGIRVNSVHPGYIYTPMTDE 193

This subgroup includes members identified as 3beta17beta hydroxysteroid dehydrogenase, 20beta hydroxysteroid dehydrogenase, and R-alcohol dehydrogenase. These proteins exhibit the canonical active site tetrad and glycine rich NAD(P)-binding motif of the classical SDRs. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 247

>gnl|CDD|187646 cd08942, RhlG_SDR_c, RhlG and related beta-ketoacyl reductases, classical (c) SDRs

 Score = 71.7 bits (176), Expect = 2e-14
 Identities = 58/218 (26%), Positives = 101/218 (46%), Gaps = 24/218 (11%)

Query: 32  NLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVL 91
           +++    ++TG + GIG   A+   + GAR+++ AR  +A  +A   L++   G + + +
Sbjct: 3   SVAGKIVLVTGGSRGIGRMIAQGFLEAGARVIISARKAEACADAAEELSA--YG-ECIAI 59

Query: 92  PLDLSSLSSVRNFVSQFHSLNLPLNLLINNAGKF--AHQHAISEDGIEMTFATNYLGHFL 149
           P DLSS   +   V++    +  L++L+NNAG    A   A  E G +     N    F 
Sbjct: 60  PADLSSEEGIEALVARVAERSDRLDVLVNNAGATWGAPLEAFPESGWDKVMDINVKSVFF 119

Query: 150 LTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALS 209
           LT+ LL  ++  A       R++N+ S          I   G       +Y    +Y  S
Sbjct: 120 LTQALL-PLLRAAATAENPARVINIGSI-------AGIVVSGL-----ENY----SYGAS 162

Query: 210 KLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTR 247
           K A    T++LA+ L     ++TVN + PG   +++T 
Sbjct: 163 KAAVHQLTRKLAKEL--AGEHITVNAIAPGRFPSKMTA 198

Pseudomonas aeruginosa RhlG is an SDR-family beta-ketoacyl reductase involved in Rhamnolipid biosynthesis. RhlG is similar to but distinct from the FabG family of beta-ketoacyl-acyl carrier protein (ACP) of type II fatty acid synthesis. RhlG and related proteins are classical SDRs, with a canonical active site tetrad and glycine-rich NAD(P)-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|237220 PRK12828, PRK12828, short chain dehydrogenase; Provisional

 Score = 71.4 bits (175), Expect = 2e-14
 Identities = 52/212 (24%), Positives = 76/212 (35%), Gaps = 30/212 (14%)

Query: 38  AIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSS 97
             ITG   G+G  TA  LA RGAR+ L  R      +         P   + +  +DL  
Sbjct: 10  VAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLP----GVPADALRIGGIDLVD 65

Query: 98  LSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHA--ISEDGIEMTFATNYLGHFLLTKLLL 155
             + R  V + +     L+ L+N AG F          D  +  +  N       +K  L
Sbjct: 66  PQAARRAVDEVNRQFGRLDALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAAL 125

Query: 156 KKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLANVL 215
             +  +       GRIVN+ +         M             Y A +A  +++L   L
Sbjct: 126 PALTASG-----GGRIVNIGAGAALKAGPGM-----------GAYAAAKA-GVARLTEAL 168

Query: 216 HTKELAQRLKQMEANVTVNCVHPGIVRTRLTR 247
              EL  R       +TVN V P I+ T   R
Sbjct: 169 -AAELLDR------GITVNAVLPSIIDTPPNR 193

Length = 239

>gnl|CDD|187618 cd05360, SDR_c3, classical (c) SDR, subgroup 3

 Score = 70.9 bits (174), Expect = 3e-14
 Identities = 55/208 (26%), Positives = 81/208 (38%), Gaps = 28/208 (13%)

Query: 39  IITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSL 98
           +ITGA+SGIG  TA   A+RGA++VL ARS +A  E    +     G + + +  D++  
Sbjct: 4   VITGASSGIGRATALAFAERGAKVVLAARSAEALHELAREVREL--GGEAIAVVADVADA 61

Query: 99  SSVRNFVSQFHSLNL-PLNLLINNAGKFAHQHAISEDGIEM--TFATNYLGHFLLTKLLL 155
           + V    +         ++  +NNAG             E    F  NYLGH   T   L
Sbjct: 62  AQVER-AADTAVERFGRIDTWVNNAGVAVFGRFEDVTPEEFRRVFDVNYLGHVYGTLAAL 120

Query: 156 KKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLANVL 215
             +    +  G  G ++NV S                            AY+ SK A   
Sbjct: 121 PHL----RRRG-GGALINVGSL----LGYRSAPLQA-------------AYSASKHAVRG 158

Query: 216 HTKELAQRLKQMEANVTVNCVHPGIVRT 243
            T+ L   L    A ++V  V P  + T
Sbjct: 159 FTESLRAELAHDGAPISVTLVQPTAMNT 186

These proteins are members of the classical SDR family, with a canonical active site triad (and also active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 233

>gnl|CDD|235712 PRK06138, PRK06138, short chain dehydrogenase; Provisional

 Score = 70.6 bits (173), Expect = 5e-14
 Identities = 63/218 (28%), Positives = 88/218 (40%), Gaps = 29/218 (13%)

Query: 33  LSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLP 92
           L+   AI+TGA SGIG  TA++ A+ GAR+V+  R  +AAE   A +A+   G       
Sbjct: 3   LAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAA---GGRAFARQ 59

Query: 93  LDLSSLSSVRNFVSQFHSLNLPLNLLINNAG--KFAHQHAISEDGIEMTFATNYLGHFLL 150
            D+ S  +V   V    +    L++L+NNAG           E   +     N  G FL 
Sbjct: 60  GDVGSAEAVEALVDFVAARWGRLDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLW 119

Query: 151 TKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSK 210
            K  +  M          G IVN +S +    +G   R                AY  SK
Sbjct: 120 AKYAIPIMQRQGG-----GSIVNTASQLA--LAGGRGR---------------AAYVASK 157

Query: 211 LANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRE 248
            A    T+ +A  L      + VN V PG + T   R 
Sbjct: 158 GAIASLTRAMA--LDHATDGIRVNAVAPGTIDTPYFRR 193

Length = 252

>gnl|CDD|187648 cd08944, SDR_c12, classical (c) SDR, subgroup 12

 Score = 70.2 bits (172), Expect = 5e-14
 Identities = 64/213 (30%), Positives = 92/213 (43%), Gaps = 32/213 (15%)

Query: 38  AIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSS 97
           AI+TGA +GIGA  A  LA+ GAR+V+      AA+   A++A        + L +D++ 
Sbjct: 6   AIVTGAGAGIGAACAARLAREGARVVVADIDGGAAQAVVAQIAGGA-----LALRVDVTD 60

Query: 98  LSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAISEDGIEM---TFATNYLGHFLLTKLL 154
              V     +       L+LL+NNAG      AI +  + +   T A N  G FL  +  
Sbjct: 61  EQQVAALFERAVEEFGGLDLLVNNAGAMHLTPAIIDTDLAVWDQTMAINLRGTFLCCRHA 120

Query: 155 LKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLANV 214
             +MI         G IVN+SS   +  SGD                   AY  SK A  
Sbjct: 121 APRMIARGG-----GSIVNLSSI--AGQSGDP---------------GYGAYGASKAAIR 158

Query: 215 LHTKELAQRLKQMEANVTVNCVHPGIVRTRLTR 247
             T+ LA  L+   A +  N + PG++ T L  
Sbjct: 159 NLTRTLAAELRH--AGIRCNALAPGLIDTPLLL 189

These are classical SDRs, with the canonical active site tetrad and glycine-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 246

>gnl|CDD|187638 cd08933, RDH_SDR_c, retinal dehydrogenase-like, classical (c) SDR

 Score = 70.6 bits (173), Expect = 6e-14
 Identities = 57/213 (26%), Positives = 94/213 (44%), Gaps = 29/213 (13%)

Query: 39  IITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSL 98
           I+TG + GIG    R   + GA++V  AR   A +  ++ L    PGS    +P D++  
Sbjct: 13  IVTGGSRGIGRGIVRAFVENGAKVVFCARGEAAGQALESELNRAGPGS-CKFVPCDVTKE 71

Query: 99  SSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAISE---DGIEMTFATNYLGHFLLTKLLL 155
             ++  +S        ++ L+NNAG         E            N + +FL +K  L
Sbjct: 72  EDIKTLISVTVERFGRIDCLVNNAGWHPPHQTTDETSAQEFRDLLNLNLISYFLASKYAL 131

Query: 156 KKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLANVL 215
             + ++      QG I+N+SS + S         +GQ  +  + Y AT+  A++ +    
Sbjct: 132 PHLRKS------QGNIINLSSLVGS---------IGQ--KQAAPYVATKG-AITAM---- 169

Query: 216 HTKELAQRLKQMEANVTVNCVHPGIVRTRLTRE 248
            TK LA  + +    V VNC+ PG + T L  E
Sbjct: 170 -TKALA--VDESRYGVRVNCISPGNIWTPLWEE 199

These classical SDRs includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the short-chain dehydrogenases/reductase family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 261

>gnl|CDD|236241 PRK08324, PRK08324, short chain dehydrogenase; Validated

 Score = 72.2 bits (178), Expect = 6e-14
 Identities = 61/213 (28%), Positives = 93/213 (43%), Gaps = 39/213 (18%)

Query: 38  AIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSS 97
           A++TGA  GIG  TA+ LA  GA +VL     +AAE A A L         + +  D++ 
Sbjct: 425 ALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELG---GPDRALGVACDVTD 481

Query: 98  LSSVRN----FVSQFHSLNLPLNLLINNAGKFAHQHAISEDGIEM---TFATNYLGHFLL 150
            ++V+         F      ++++++NAG  A    I E   E    +F  N  GHFL+
Sbjct: 482 EAAVQAAFEEAALAFGG----VDIVVSNAG-IAISGPIEETSDEDWRRSFDVNATGHFLV 536

Query: 151 TKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSK 210
            +  ++ M    KA G+ G IV ++S  ++   G           N   Y A +A A   
Sbjct: 537 AREAVRIM----KAQGLGGSIVFIASK-NAVNPG----------PNFGAYGAAKA-AELH 580

Query: 211 LANVLHTKELAQRLKQMEANVTVNCVHP-GIVR 242
           L   L   EL          + VN V+P  +VR
Sbjct: 581 LVRQLA-LELG------PDGIRVNGVNPDAVVR 606

Length = 681

>gnl|CDD|235725 PRK06179, PRK06179, short chain dehydrogenase; Provisional

 Score = 70.3 bits (173), Expect = 7e-14
 Identities = 47/146 (32%), Positives = 73/146 (50%), Gaps = 19/146 (13%)

Query: 34  SSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPL 93
           +S  A++TGA+SGIG  TA  LA+ G R+   +R+   A           P   + +L L
Sbjct: 3   NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAA----------PIPGVELLEL 52

Query: 94  DLSSLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAISEDGIEMT---FATNYLGHFLL 150
           D++  +SV+  V +  +    +++L+NNAG      A  E  I      F TN  G   +
Sbjct: 53  DVTDDASVQAAVDEVIARAGRIDVLVNNAG-VGLAGAAEESSIAQAQALFDTNVFGILRM 111

Query: 151 TKLLLKKMIETAKATGIQGRIVNVSS 176
           T+ +L  M    +A G  GRI+N+SS
Sbjct: 112 TRAVLPHM----RAQG-SGRIINISS 132

Length = 270

>gnl|CDD|235935 PRK07109, PRK07109, short chain dehydrogenase; Provisional

 Score = 70.7 bits (174), Expect = 9e-14
 Identities = 37/142 (26%), Positives = 64/142 (45%), Gaps = 9/142 (6%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLS 96
             +ITGA++G+G  TAR  A+RGA++VL AR  +  E   A + +   G + + +  D++
Sbjct: 10  VVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAA--GGEALAVVADVA 67

Query: 97  SLSSVRNFVSQFHSLNLPLNLLINNAGK--FAHQHAISEDGIEMTFATNYLGHFLLTKLL 154
              +V+    +      P++  +NNA    F     ++ +         YLG    T   
Sbjct: 68  DAEAVQAAADRAEEELGPIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAA 127

Query: 155 LKKMIETAKATGIQGRIVNVSS 176
           L+ M    +     G I+ V S
Sbjct: 128 LRHMRPRDR-----GAIIQVGS 144

Length = 334

>gnl|CDD|187645 cd08941, 3KS_SDR_c, 3-keto steroid reductase, classical (c) SDRs

 Score = 70.1 bits (172), Expect = 9e-14
 Identities = 57/262 (21%), Positives = 96/262 (36%), Gaps = 62/262 (23%)

Query: 38  AIITGATSGIGAETA-RVLA----KRGARLVLPARSLKAAEEAKARLASDCPGSDIV--V 90
            ++TGA SG+G     R+LA         L+L  R+L+ AE A   L +  P + +V   
Sbjct: 4   VLVTGANSGLGLAICERLLAEDDENPELTLILACRNLQRAEAACRALLASHPDARVVFDY 63

Query: 91  LPLDLSSLSSVRNFVSQF------------------------------------HSLNLP 114
           + +DLS++ SV     +                                      ++  P
Sbjct: 64  VLVDLSNMVSVFAAAKELKKRYPRLDYLYLNAGIMPNPGIDWIGAIKEVLTNPLFAVTNP 123

Query: 115 LNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNV 174
               I   G  +     +EDG+   F TN  GH+     L++++      +    +I+  
Sbjct: 124 -TYKIQAEGLLSQGDKATEDGLGEVFQTNVFGHY----YLIRELEPLLCRSDGGSQIIWT 178

Query: 175 SSSIH--SWFSGDMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVT 232
           SS      +FS + I    Q  +  + Y +++ Y +  L+  L+ K     +        
Sbjct: 179 SSLNASPKYFSLEDI----QHLKGPAPYSSSK-YLVDLLSLALNRKFNKLGVYS------ 227

Query: 233 VNCVHPGIVRTRLTREREGFIT 254
              VHPGI  T LT       T
Sbjct: 228 -YVVHPGICTTNLTYGILPPFT 248

3-keto steroid reductase (in concert with other enzymes) catalyzes NADP-dependent sterol C-4 demethylation, as part of steroid biosynthesis. 3-keto reductase is a classical SDR, with a well conserved canonical active site tetrad and fairly well conserved characteristic NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 290

>gnl|CDD|235703 PRK06125, PRK06125, short chain dehydrogenase; Provisional

 Score = 69.7 bits (171), Expect = 1e-13
 Identities = 51/150 (34%), Positives = 68/150 (45%), Gaps = 24/150 (16%)

Query: 33  LSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLP 92
           L+    +ITGA+ GIGA  A   A  G  L L AR   A E   A L +   G D+ V  
Sbjct: 5   LAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRA-AHGVDVAVHA 63

Query: 93  LDLSSLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAISEDGIE-MTFAT-------NY 144
           LDLSS  +      Q  +    +++L+NNAG      AI   G++ +  A          
Sbjct: 64  LDLSSPEA----REQLAAEAGDIDILVNNAG------AIPGGGLDDVDDAAWRAGWELKV 113

Query: 145 LGHFLLTKLLLKKMIETAKATGIQGRIVNV 174
            G+  LT+L   +M    KA G  G IVNV
Sbjct: 114 FGYIDLTRLAYPRM----KARG-SGVIVNV 138

Length = 259

>gnl|CDD|180817 PRK07060, PRK07060, short chain dehydrogenase; Provisional

 Score = 69.4 bits (170), Expect = 1e-13
 Identities = 57/217 (26%), Positives = 91/217 (41%), Gaps = 38/217 (17%)

Query: 32  NLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVL 91
           + S  + ++TGA+SGIG   A  LA+RGAR+V  AR+  A +        +        L
Sbjct: 6   DFSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGETGCE-------PL 58

Query: 92  PLDLSSLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAI--SEDGIEMTFATNYLGHFL 149
            LD+   +++R  ++         + L+N AG  + + A+  + +G +   A N  G  L
Sbjct: 59  RLDVGDDAAIRAALAAAG----AFDGLVNCAGIASLESALDMTAEGFDRVMAVNARGAAL 114

Query: 150 LTKLLLKKMIETAKATGIQGRIVNVSS-SIHSWFSGDMIRYLGQISRNKSHYDATRAYAL 208
           + + + + MI    A G  G IVNVSS +                           AY  
Sbjct: 115 VARHVARAMI----AAGRGGSIVNVSSQAALVGL------------------PDHLAYCA 152

Query: 209 SKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRL 245
           SK A    T+ L   L      + VN V+P +  T +
Sbjct: 153 SKAALDAITRVLCVELG--PHGIRVNSVNPTVTLTPM 187

Length = 245

>gnl|CDD|181721 PRK09242, PRK09242, tropinone reductase; Provisional

 Score = 69.8 bits (171), Expect = 1e-13
 Identities = 68/229 (29%), Positives = 102/229 (44%), Gaps = 35/229 (15%)

Query: 32  NLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVL 91
            L   TA+ITGA+ GIG   AR     GA +++ AR   A  +A+  LA + P  ++  L
Sbjct: 6   RLDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGL 65

Query: 92  PLDLSSLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAI--SEDGIEMTFATNYLGHFL 149
             D+S     R  +         L++L+NNAG    + AI  +ED     F TN    F 
Sbjct: 66  AADVSDDEDRRAILDWVEDHWDGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFE 125

Query: 150 LTKL---LLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAY 206
           L++    LLK+   +A        IVN+ S      SG             +H  +   Y
Sbjct: 126 LSRYAHPLLKQHASSA--------IVNIGSV-----SG------------LTHVRSGAPY 160

Query: 207 ALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITD 255
            ++K A +  T+ LA  ++  E  + VN V P  +RT LT    G ++D
Sbjct: 161 GMTKAALLQMTRNLA--VEWAEDGIRVNAVAPWYIRTPLT---SGPLSD 204

Length = 257

>gnl|CDD|187603 cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 3, classical (c) SDR

 Score = 69.3 bits (170), Expect = 1e-13
 Identities = 61/210 (29%), Positives = 94/210 (44%), Gaps = 34/210 (16%)

Query: 33  LSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLP 92
           L    AI+TGA SG G   AR  A+ GAR+V+   +   AE    R+A+D   + I +  
Sbjct: 3   LEGKVAIVTGAGSGFGEGIARRFAQEGARVVIADINADGAE----RVAADIGEAAIAI-Q 57

Query: 93  LDLSSLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHA----ISEDGIEMTFATNYLGHF 148
            D++  + V   V    S    L++L+NNAG   H++     + E+  +  FA N    +
Sbjct: 58  ADVTKRADVEAMVEAALSKFGRLDILVNNAG-ITHRNKPMLEVDEEEFDRVFAVNVKSIY 116

Query: 149 LLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYAL 208
           L  + L+  M E        G I+N++S+     +G   R         + Y+A      
Sbjct: 117 LSAQALVPHMEE-----QGGGVIINIAST-----AGLRPR------PGLTWYNA------ 154

Query: 209 SKLANVLHTKELAQRLKQMEANVTVNCVHP 238
           SK   V  TK +A  L     N+ VNC+ P
Sbjct: 155 SKGWVVTATKAMAVELA--PRNIRVNCLCP 182

This subgroup includes the putative Brucella melitensis biovar Abortus 2308 BKR, FabG, Mesorhizobium loti MAFF303099 FabG, and other classical SDRs. BKR, a member of the SDR family, catalyzes the NADPH-dependent reduction of acyl carrier protein in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of 4 elongation steps, which are repeated to extend the fatty acid chain thru the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I Fas utilizes one or 2 multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 248

>gnl|CDD|171820 PRK12936, PRK12936, 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

 Score = 69.6 bits (170), Expect = 1e-13
 Identities = 62/224 (27%), Positives = 99/224 (44%), Gaps = 45/224 (20%)

Query: 32  NLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVL 91
           +LS   A++TGA+ GIG E AR+L  +GA + L    ++  E   A L     G  + + 
Sbjct: 3   DLSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAEL-----GERVKIF 57

Query: 92  PLDLSSLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAISEDGI---------EMTFAT 142
           P +LS    V+    +  +    +++L+NNAG       I++DG+         +     
Sbjct: 58  PANLSDRDEVKALGQKAEADLEGVDILVNNAG-------ITKDGLFVRMSDEDWDSVLEV 110

Query: 143 NYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDA 202
           N    F LT+ L   M+         GRI+N++S +       +    GQ +        
Sbjct: 111 NLTATFRLTRELTHPMMRRR-----YGRIINITSVV------GVTGNPGQAN-------- 151

Query: 203 TRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLT 246
              Y  SK   +  +K LAQ +     NVTVNCV PG + + +T
Sbjct: 152 ---YCASKAGMIGFSKSLAQEIATR--NVTVNCVAPGFIESAMT 190

Length = 245

>gnl|CDD|182051 PRK09730, PRK09730, putative NAD(P)-binding oxidoreductase; Provisional

 Score = 69.5 bits (170), Expect = 1e-13
 Identities = 63/213 (29%), Positives = 95/213 (44%), Gaps = 26/213 (12%)

Query: 37  TAIITGATSGIGAETARVLAKRGARL-VLPARSLKAAEEAKARLASDCPGSDIVVLPLDL 95
            A++TG + GIG  TA +LA+ G  + V   ++L AA+E    +     G    VL  D+
Sbjct: 3   IALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQA--GGKAFVLQADI 60

Query: 96  SSLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAI---SEDGIEMTFATNYLGHFLLTK 152
           S  + V    +     + PL  L+NNAG    Q  +   + + I    +TN  G+FL  +
Sbjct: 61  SDENQVVAMFTAIDQHDEPLAALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCR 120

Query: 153 LLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLA 212
             +K+M    K  G  G IVNVSS+              ++     + D    YA SK A
Sbjct: 121 EAVKRM--ALKHGGSGGAIVNVSSAA------------SRLGAPGEYVD----YAASKGA 162

Query: 213 NVLHTKELAQRLKQMEANVTVNCVHPGIVRTRL 245
               T  L+  L+     + VNCV PG + T +
Sbjct: 163 IDTLTTGLS--LEVAAQGIRVNCVRPGFIYTEM 193

Length = 247

>gnl|CDD|181335 PRK08264, PRK08264, short chain dehydrogenase; Validated

 Score = 69.1 bits (170), Expect = 1e-13
 Identities = 58/223 (26%), Positives = 83/223 (37%), Gaps = 41/223 (18%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLV-LPARSLKAAEEAKARLASDCPGSDIVVLPLDL 95
             ++TGA  GIG      L  RGA  V   AR  ++  +   R         +V L LD+
Sbjct: 8   VVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTDLGPR---------VVPLQLDV 58

Query: 96  SSLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAI---SEDGIEMTFATNYLGHFLLTK 152
           +  +SV             + +L+NNAG F     +    ED +     TNY G   + +
Sbjct: 59  TDPASVAAAAEAAS----DVTILVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMAR 114

Query: 153 LLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLA 212
                      A G  G IVNV  S+ SW +   +            Y A++A A S L 
Sbjct: 115 AF----APVLAANG-GGAIVNV-LSVLSWVNFPNL----------GTYSASKAAAWS-LT 157

Query: 213 NVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITD 255
             L   ELA +         V  VHPG + T +    +     
Sbjct: 158 QALRA-ELAPQ------GTRVLGVHPGPIDTDMAAGLDAPKAS 193

Length = 238

>gnl|CDD|180413 PRK06128, PRK06128, oxidoreductase; Provisional

 Score = 69.9 bits (171), Expect = 1e-13
 Identities = 73/233 (31%), Positives = 98/233 (42%), Gaps = 45/233 (19%)

Query: 24  EQVTDGCPNLSSVTAIITGATSGIGAETARVLAKRGARLV---LPARSLKAAE-----EA 75
           EQ   G   L    A+ITGA SGIG  TA   A+ GA +    LP     AAE     +A
Sbjct: 44  EQSYKGFGRLQGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQA 103

Query: 76  KARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAISE-- 133
           + R A        V LP DL   +  R  V +       L++L+N AGK      I++  
Sbjct: 104 EGRKA--------VALPGDLKDEAFCRQLVERAVKELGGLDILVNIAGKQTAVKDIADIT 155

Query: 134 -DGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQ 192
            +  + TF TN    F L K  +  +   A        I+N + SI S+          Q
Sbjct: 156 TEQFDATFKTNVYAMFWLCKAAIPHLPPGAS-------IIN-TGSIQSY----------Q 197

Query: 193 ISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRL 245
            S     Y +T+A      A V  TK LA+++   E  + VN V PG V T L
Sbjct: 198 PSPTLLDYASTKA------AIVAFTKALAKQV--AEKGIRVNAVAPGPVWTPL 242

Length = 300

>gnl|CDD|235853 PRK06701, PRK06701, short chain dehydrogenase; Provisional

 Score = 69.7 bits (171), Expect = 2e-13
 Identities = 62/231 (26%), Positives = 96/231 (41%), Gaps = 52/231 (22%)

Query: 29  GCPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKA-AEEAKARLASDCPGSD 87
           G   L    A+ITG  SGIG   A + AK GA + +        A E K R+  +  G  
Sbjct: 40  GSGKLKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKE--GVK 97

Query: 88  IVVLPLDLSSLS----SVRNFVSQFHSLNLPLNLLINNAGKFAHQHA---ISEDGIEMTF 140
            +++P D+S  +    +V   V +   L++    L+NNA     Q +   I+ + ++ TF
Sbjct: 98  CLLIPGDVSDEAFCKDAVEETVRELGRLDI----LVNNAAFQYPQQSLEDITAEQLDKTF 153

Query: 141 ATNYLGHFLLTKLLLKKM------IETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQIS 194
            TN   +F +TK  L  +      I T   TG +G                         
Sbjct: 154 KTNIYSYFHMTKAALPHLKQGSAIINTGSITGYEG------------------------- 188

Query: 195 RNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRL 245
            N++  D    Y+ +K A    T+ LAQ L  ++  + VN V PG + T L
Sbjct: 189 -NETLID----YSATKGAIHAFTRSLAQSL--VQKGIRVNAVAPGPIWTPL 232

Length = 290

>gnl|CDD|183773 PRK12824, PRK12824, acetoacetyl-CoA reductase; Provisional

 Score = 68.6 bits (168), Expect = 2e-13
 Identities = 56/217 (25%), Positives = 88/217 (40%), Gaps = 43/217 (19%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIV-VLPLDL 95
            A++TGA  GIG+  AR L   G R++    S      AK          D V +  LD+
Sbjct: 4   IALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDC--AKDWFEEYGFTEDQVRLKELDV 61

Query: 96  SSLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAISEDGI--EMTFA-------TNYLG 146
           +        +++      P+++L+NNAG       I+ D +   M+         TN   
Sbjct: 62  TDTEECAEALAEIEEEEGPVDILVNNAG-------ITRDSVFKRMSHQEWNDVINTNLNS 114

Query: 147 HFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAY 206
            F +T+ L   M E        GRI+N+SS                ++  K  +  T  Y
Sbjct: 115 VFNVTQPLFAAMCEQG-----YGRIINISS----------------VNGLKGQFGQT-NY 152

Query: 207 ALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRT 243
           + +K   +  TK LA    +    +TVNC+ PG + T
Sbjct: 153 SAAKAGMIGFTKALASEGAR--YGITVNCIAPGYIAT 187

Length = 245

>gnl|CDD|187610 cd05352, MDH-like_SDR_c, mannitol dehydrogenase (MDH)-like, classical (c) SDRs

 Score = 68.9 bits (169), Expect = 2e-13
 Identities = 58/217 (26%), Positives = 88/217 (40%), Gaps = 25/217 (11%)

Query: 33  LSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLP 92
           L    AI+TG + GIG   AR LA+ GA + +   S   AEE    LA    G       
Sbjct: 6   LKGKVAIVTGGSRGIGLAIARALAEAGADVAIIYNSAPRAEEKAEELAKKY-GVKTKAYK 64

Query: 93  LDLSSLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAI--SEDGIEMTFATNYLGHFLL 150
            D+SS  SV     Q       +++LI NAG   H+ A+  + +        N  G F  
Sbjct: 65  CDVSSQESVEKTFKQIQKDFGKIDILIANAGITVHKPALDYTYEQWNKVIDVNLNGVFNC 124

Query: 151 TKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSK 210
            +   K   +  K     G ++  +S         M   +    + ++ Y+A++A A+  
Sbjct: 125 AQAAAKIFKKQGK-----GSLIITAS---------MSGTIVNRPQPQAAYNASKA-AVIH 169

Query: 211 LANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTR 247
           LA  L   E A      +  + VN + PG + T LT 
Sbjct: 170 LAKSL-AVEWA------KYFIRVNSISPGYIDTDLTD 199

NADP-mannitol dehydrogenase catalyzes the conversion of fructose to mannitol, an acyclic 6-carbon sugar. MDH is a tetrameric member of the SDR family. This subgroup also includes various other tetrameric SDRs, including Pichia stipitis D-arabinitol dehydrogenase (aka polyol dehydrogenase), Candida albicans Sou1p, a sorbose reductase, and Candida parapsilosis (S)-specific carbonyl reductase (SCR, aka S-specific alcohol dehydrogenase) which catalyzes the enantioselective reduction of 2-hydroxyacetophenone into (S)-1-phenyl-1,2-ethanediol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 252

>gnl|CDD|180448 PRK06182, PRK06182, short chain dehydrogenase; Validated

 Score = 69.2 bits (170), Expect = 2e-13
 Identities = 62/210 (29%), Positives = 99/210 (47%), Gaps = 36/210 (17%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLS 96
            A++TGA+SGIG  TAR LA +G  +   AR +    +    LAS      +  L LD++
Sbjct: 5   VALVTGASSGIGKATARRLAAQGYTVYGAARRV----DKMEDLAS----LGVHPLSLDVT 56

Query: 97  SLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAISEDGIE---MTFATNYLGHFLLTKL 153
             +S++  V    +    +++L+NNAG +    AI +  I+     F  N  G   LT+L
Sbjct: 57  DEASIKAAVDTIIAEEGRIDVLVNNAG-YGSYGAIEDVPIDEARRQFEVNLFGAARLTQL 115

Query: 154 LLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLAN 213
           +L  M    +A    GRI+N+SS       G +   LG      + Y AT+ +AL   ++
Sbjct: 116 VLPHM----RAQR-SGRIINISS-----MGGKIYTPLG------AWYHATK-FALEGFSD 158

Query: 214 VLHTKELAQRLKQMEANVTVNCVHPGIVRT 243
            L       RL+     + V  + PG ++T
Sbjct: 159 AL-------RLEVAPFGIDVVVIEPGGIKT 181

Length = 273

>gnl|CDD|187627 cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reductase (TER) and 2,4-dienoyl-CoA reductase (DECR), atypical (a) SDR

 Score = 68.4 bits (168), Expect = 3e-13
 Identities = 55/217 (25%), Positives = 89/217 (41%), Gaps = 30/217 (13%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLS 96
            A ITG  +GIG   A+  A+ GA + +  R  +  E A   ++S   G     +  D+ 
Sbjct: 5   VAFITGGGTGIGKAIAKAFAELGASVAIAGRKPEVLEAAAEEISSA-TGGRAHPIQCDVR 63

Query: 97  SLSSVRNFVSQFHSLNLPLNLLINNA-GKF-AHQHAISEDGIEMTFATNYLGHFLLTKLL 154
              +V   V +       +++LINNA G F A   ++S +G +     +  G F  TK +
Sbjct: 64  DPEAVEAAVDETLKEFGKIDILINNAAGNFLAPAESLSPNGFKTVIDIDLNGTFNTTKAV 123

Query: 155 LKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRA--YALSKLA 212
            K++IE        G I+N+S++     S   +           H  A +A   AL++  
Sbjct: 124 GKRLIE----AKHGGSILNISATYAYTGSPFQV-----------HSAAAKAGVDALTRSL 168

Query: 213 NVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRER 249
            V    E           + VN + PG + T    ER
Sbjct: 169 AV----EWGPY------GIRVNAIAPGPIPTTEGMER 195

TTER is a peroxisomal protein with a proposed role in fatty acid elongation. Fatty acid synthesis is known to occur in the both endoplasmic reticulum and mitochondria; peroxisomal TER has been proposed as an additional fatty acid elongation system, it reduces the double bond at C-2 as the last step of elongation. This system resembles the mitochondrial system in that acetyl-CoA is used as a carbon donor. TER may also function in phytol metabolism, reducting phytenoyl-CoA to phytanoyl-CoA in peroxisomes. DECR processes double bonds in fatty acids to increase their utility in fatty acid metabolism; it reduces 2,4-dienoyl-CoA to an enoyl-CoA. DECR is active in mitochondria and peroxisomes. This subgroup has the Gly-rich NAD-binding motif of the classical SDR family, but does not display strong identity to the canonical active site tetrad, and lacks the characteristic Tyr at the usual position. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 249

>gnl|CDD|237187 PRK12743, PRK12743, oxidoreductase; Provisional

 Score = 68.1 bits (167), Expect = 3e-13
 Identities = 55/213 (25%), Positives = 90/213 (42%), Gaps = 28/213 (13%)

Query: 37  TAIITGATSGIGAETARVLAKRGARL-VLPARSLKAAEEAKARLASDCPGSDIVVLPLDL 95
            AI+T + SGIG   A +LA++G  + +      + A+E    + S   G    +  LDL
Sbjct: 4   VAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSH--GVRAEIRQLDL 61

Query: 96  SSLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAI--SEDGIEMTFATNYLGHFLLTKL 153
           S L      + +       +++L+NNAG       +    D     F  +  G FL +++
Sbjct: 62  SDLPEGAQALDKLIQRLGRIDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQI 121

Query: 154 LLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLAN 213
             + M+      G  GRI+N+ +S+H                  S Y A +  AL  L  
Sbjct: 122 AARHMV----KQGQGGRIINI-TSVHE----------HTPLPGASAYTAAKH-ALGGL-- 163

Query: 214 VLHTKELAQRLKQMEANVTVNCVHPGIVRTRLT 246
              TK +A  L+ +E  + VN V PG + T + 
Sbjct: 164 ---TKAMA--LELVEHGILVNAVAPGAIATPMN 191

Length = 256

>gnl|CDD|188169 TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reductase

 Score = 67.5 bits (165), Expect = 5e-13
 Identities = 62/220 (28%), Positives = 95/220 (43%), Gaps = 43/220 (19%)

Query: 38  AIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARL-ASDCPGSDIVVLPLDLS 96
           A++TG   GIG    + LAK G R+   A      E A+A L      G D  V+  D+S
Sbjct: 3   ALVTGGMGGIGTAICQRLAKDGYRVA--ANCGPNEERAEAWLQEQGALGFDFRVVEGDVS 60

Query: 97  SLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAISEDGI--EMTFA-------TNYLGH 147
           S  S +  V++  +   P+++L+NNAG       I+ D    +MT+        TN    
Sbjct: 61  SFESCKAAVAKVEAELGPIDVLVNNAG-------ITRDATFKKMTYEQWSAVIDTNLNSV 113

Query: 148 FLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYA 207
           F +T+ ++  M E        GRI+N+SS                ++  K  +  T  Y+
Sbjct: 114 FNVTQPVIDGMRERG-----WGRIINISS----------------VNGQKGQFGQTN-YS 151

Query: 208 LSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTR 247
            +K   +  TK LAQ        VTVN + PG + T +  
Sbjct: 152 AAKAGMIGFTKALAQEGAT--KGVTVNTISPGYIATDMVM 189

This model represent acetoacetyl-CoA reductase, a member of the family short-chain-alcohol dehydrogenases. Note that, despite the precision implied by the enzyme name, the reaction of EC 1.1.1.36 is defined more generally as (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. Length = 242

>gnl|CDD|180617 PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 66.9 bits (164), Expect = 6e-13
 Identities = 60/220 (27%), Positives = 89/220 (40%), Gaps = 46/220 (20%)

Query: 31  PNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVV 90
               + T +ITGA SGIG   AR    +GA++          ++      S     +   
Sbjct: 1   QEFMTKTVLITGAASGIGLAQARAFLAQGAQVY-------GVDKQDKPDLSG----NFHF 49

Query: 91  LPLDLSS-LSSVRNFVSQFHSLNLPLNLLINNAGK---FAHQHAISEDGIEMTFATNYLG 146
           L LDLS  L  + ++V          ++L N AG    +      S +  +  F TN   
Sbjct: 50  LQLDLSDDLEPLFDWVPSV-------DILCNTAGILDDYKPLLDTSLEEWQHIFDTNLTS 102

Query: 147 HFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAY 206
            FLLT+  L +M+E        G I+N+  SI S+ +G      G             AY
Sbjct: 103 TFLLTRAYLPQMLERKS-----GIIINM-CSIASFVAGG-----GGA-----------AY 140

Query: 207 ALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLT 246
             SK A    TK+LA  L   +  + V  + PG V+T +T
Sbjct: 141 TASKHALAGFTKQLA--LDYAKDGIQVFGIAPGAVKTPMT 178

Length = 235

>gnl|CDD|233441 TIGR01500, sepiapter_red, sepiapterin reductase

 Score = 67.6 bits (165), Expect = 6e-13
 Identities = 57/235 (24%), Positives = 88/235 (37%), Gaps = 49/235 (20%)

Query: 36  VTAIITGATSGIGAETARVLAKR----GARLVLPARSLKAAEEAKARLASDCPGSDIVVL 91
              ++TGA+ G G   A+ LAK     G+ LVL AR+ +A  + KA + ++  G  +V +
Sbjct: 1   AVCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERSGLRVVRV 60

Query: 92  PLDLSSLSSVRNFVSQFHSLNLPLN----LLINNAGKFAHQHAISEDGIEMTF-----AT 142
            LDL + + +   +     L  P      LLINNAG          D  + T      A 
Sbjct: 61  SLDLGAEAGLEQLLKALRELPRPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWAL 120

Query: 143 NYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSS-----SIHSWFSGDMIRYLGQISRNK 197
           N      LT  +LK   ++    G+   +VN+SS         W                
Sbjct: 121 NLTSMLCLTSSVLKAFKDSP---GLNRTVVNISSLCAIQPFKGW---------------- 161

Query: 198 SHYDATRAYALSKLANVLHTKELAQRLK-----------QMEANVTVNCVHPGIV 241
           + Y A +A     L  VL  +E    ++            M+  V    V P + 
Sbjct: 162 ALYCAGKAAR-DMLFQVLALEEKNPNVRVLNYAPGVLDTDMQQQVREESVDPDMR 215

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs. Length = 256

>gnl|CDD|236190 PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

 Score = 66.8 bits (164), Expect = 8e-13
 Identities = 52/219 (23%), Positives = 78/219 (35%), Gaps = 49/219 (22%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLS 96
           T  +TGA  GIG   A    + GA+++          +     A            LD+S
Sbjct: 10  TVWVTGAAQGIGYAVALAFVEAGAKVI--GFDQAFLTQEDYPFA---------TFVLDVS 58

Query: 97  SLSSVRNFVSQFHSLNLPLNLLINNAG--KFAHQHAISEDGIEMTFATNYLGHFLLTKLL 154
             ++V     +  +   PL++L+N AG  +     ++S++  + TFA N  G F L + +
Sbjct: 59  DAAAVAQVCQRLLAETGPLDVLVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAV 118

Query: 155 LKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATR--AYALSKLA 212
           + +           G IV V S                   N +H       AY  SK A
Sbjct: 119 MPQFRRQR-----SGAIVTVGS-------------------NAAHVPRIGMAAYGASKAA 154

Query: 213 NVLHTK----ELAQRLKQMEANVTVNCVHPGIVRTRLTR 247
                K    ELA         V  N V PG   T + R
Sbjct: 155 LTSLAKCVGLELA------PYGVRCNVVSPGSTDTDMQR 187

Length = 252

>gnl|CDD|226476 COG3967, DltE, Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

 Score = 66.7 bits (163), Expect = 9e-13
 Identities = 48/145 (33%), Positives = 68/145 (46%), Gaps = 17/145 (11%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLS 96
           T +ITG  SGIG   A+   + G  +++  R+ +   EAKA         +I     D++
Sbjct: 7   TILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAEN------PEIHTEVCDVA 60

Query: 97  SLSSVRNFVSQFHSLNLP-LNLLINNAG-KFAHQHAISED---GIEMTFATNYLGHFLLT 151
              S R  V ++     P LN+LINNAG +       +ED     E   ATN L    LT
Sbjct: 61  DRDSRRELV-EWLKKEYPNLNVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLT 119

Query: 152 KLLLKKMIETAKATGIQGRIVNVSS 176
            LLL  ++   +AT     I+NVSS
Sbjct: 120 ALLLPHLLRQPEAT-----IINVSS 139

Length = 245

>gnl|CDD|181491 PRK08589, PRK08589, short chain dehydrogenase; Validated

 Score = 66.7 bits (163), Expect = 1e-12
 Identities = 64/219 (29%), Positives = 100/219 (45%), Gaps = 37/219 (16%)

Query: 33  LSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLP 92
           L +  A+ITGA++GIG  +A  LA+ GA  VL     +A  E   ++ S+  G       
Sbjct: 4   LENKVAVITGASTGIGQASAIALAQEGAY-VLAVDIAEAVSETVDKIKSN--GGKAKAYH 60

Query: 93  LDLSSLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAISEDGIEM---TFATNYLGHFL 149
           +D+S    V++F S+       +++L NNAG       I E  +++     A +  G FL
Sbjct: 61  VDISDEQQVKDFASEIKEQFGRVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFL 120

Query: 150 LTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSG---DMIRYLGQISRNKSHYDATRAY 206
           +TK+LL  M+E        G I+N SS     FSG   D+          +S Y+A    
Sbjct: 121 MTKMLLPLMMEQG------GSIINTSS-----FSGQAADL---------YRSGYNA---- 156

Query: 207 ALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRL 245
           A   + N   TK +A  ++     +  N + PG + T L
Sbjct: 157 AKGAVINF--TKSIA--IEYGRDGIRANAIAPGTIETPL 191

Length = 272

>gnl|CDD|181297 PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 66.5 bits (163), Expect = 1e-12
 Identities = 61/227 (26%), Positives = 99/227 (43%), Gaps = 53/227 (23%)

Query: 39  IITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSL 98
           +ITG   G+G   A  LA++GA+L L   + +  EEA A   +   G+++     +++  
Sbjct: 9   VITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGA--LGTEVRGYAANVTDE 66

Query: 99  SSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAISEDGI-----------EMTFA------ 141
             V    +Q       LN LINNAG       I  DG+           +M+        
Sbjct: 67  EDVEATFAQIAEDFGQLNGLINNAG-------ILRDGLLVKAKDGKVTSKMSLEQFQSVI 119

Query: 142 -TNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSS-SIHSWFSGDMIRYLGQISRNKSH 199
             N  G FL  +    KMIE+      +G I+N+SS +      G+M    GQ     ++
Sbjct: 120 DVNLTGVFLCGREAAAKMIESGS----KGVIINISSIARA----GNM----GQ-----TN 162

Query: 200 YDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLT 246
           Y A++A  ++ +  V   KELA+        + V  + PG++ T +T
Sbjct: 163 YSASKA-GVAAMT-VTWAKELARY------GIRVAAIAPGVIETEMT 201

Length = 253

>gnl|CDD|187596 cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 1, classical (c) SDR

 Score = 65.9 bits (161), Expect = 2e-12
 Identities = 58/221 (26%), Positives = 92/221 (41%), Gaps = 37/221 (16%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPAR------SLKAAEEAKARLASDCPGSDIVV 90
            AI+TGA+ GIG   A  LA RG  + +         +   AE   A   +    +DI  
Sbjct: 3   VAIVTGASRGIGRAIATELAARGFDIAINDLPDDDQATEVVAEVLAAGRRAIYFQADIGE 62

Query: 91  LPLDLSSLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHA----ISEDGIEMTFATNYLG 146
           L    + L         F      L+ L+NNAG           ++ED  +   A N  G
Sbjct: 63  LSDHEALLDQAWE---DFGR----LDCLVNNAGIAVRPRGDLLDLTEDSFDRLIAINLRG 115

Query: 147 HFLLTKLLLKKMIETAKA-TGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRA 205
            F LT+ + ++M+E      G    I+ V +SI++            +S N+  Y  ++A
Sbjct: 116 PFFLTQAVARRMVEQPDRFDGPHRSIIFV-TSINA----------YLVSPNRGEYCISKA 164

Query: 206 YALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLT 246
             LS       T+ LA RL   +  + V+ + PG++ T +T
Sbjct: 165 -GLSMA-----TRLLAYRLA--DEGIAVHEIRPGLIHTDMT 197

This subgroup includes Escherichia coli CFT073 FabG. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 255

>gnl|CDD|187639 cd08934, CAD_SDR_c, clavulanic acid dehydrogenase (CAD), classical (c) SDR

 Score = 65.6 bits (160), Expect = 2e-12
 Identities = 64/216 (29%), Positives = 93/216 (43%), Gaps = 28/216 (12%)

Query: 33  LSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLP 92
           L    A++TGA+SGIG  TAR LA  GA + + AR +   E     L ++  G   +VL 
Sbjct: 1   LQGKVALVTGASSGIGEATARALAAEGAAVAIAARRVDRLEALADELEAE--GGKALVLE 58

Query: 93  LDLSSLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAISEDGIEMT--FATNYLGHFLL 150
           LD++    V   V +       L++L+NNAG          D  + T    TN LG    
Sbjct: 59  LDVTDEQQVDAAVERTVEALGRLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYT 118

Query: 151 TKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSK 210
           T   L   +   K T     IVN+SS      +G +        RN + Y+AT+ + ++ 
Sbjct: 119 THAALPHHLLRNKGT-----IVNISS-----VAGRV------AVRNSAVYNATK-FGVNA 161

Query: 211 LANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLT 246
            +  L       R +  E  V V  + PG V T L 
Sbjct: 162 FSEGL-------RQEVTERGVRVVVIEPGTVDTELR 190

CAD catalyzes the NADP-dependent reduction of clavulanate-9-aldehyde to clavulanic acid, a beta-lactamase inhibitor. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

>gnl|CDD|187612 cd05354, SDR_c7, classical (c) SDR, subgroup 7

 Score = 65.5 bits (160), Expect = 2e-12
 Identities = 54/220 (24%), Positives = 83/220 (37%), Gaps = 37/220 (16%)

Query: 37  TAIITGATSGIGAETARVLAKRGA-RLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDL 95
           T ++TGA  GIG      L   GA ++    R   +A    A+      G  +V L LD+
Sbjct: 5   TVLVTGANRGIGKAFVESLLAHGAKKVYAAVRDPGSAAHLVAKY-----GDKVVPLRLDV 59

Query: 96  SSLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAISE---DGIEMTFATNYLGHFLLTK 152
           +   S++   +Q       ++++INNAG       + E   + ++     N  G   L +
Sbjct: 60  TDPESIKAAAAQAKD----VDVVINNAGVLKPATLLEEGALEALKQEMDVNVFGLLRLAQ 115

Query: 153 LLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLA 212
                     KA G  G IVN+ +S+ S              +N         Y+ SK A
Sbjct: 116 AFA----PVLKANG-GGAIVNL-NSVASL-------------KNFPAMG---TYSASKSA 153

Query: 213 NVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGF 252
               T+ L   L        V  VHPG + TR+     G 
Sbjct: 154 AYSLTQGLRAELA--AQGTLVLSVHPGPIDTRMAAGAGGP 191

These proteins are members of the classical SDR family, with a canonical active site triad (and also an active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 235

>gnl|CDD|187640 cd08935, mannonate_red_SDR_c, putative D-mannonate oxidoreductase, classical (c) SDR

 Score = 65.9 bits (161), Expect = 2e-12
 Identities = 64/249 (25%), Positives = 104/249 (41%), Gaps = 56/249 (22%)

Query: 32  NLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVL 91
           +L +  A+ITG T  +G   AR LA+ GA++    R+ +  ++  A+  +   G  I + 
Sbjct: 2   SLKNKVAVITGGTGVLGGAMARALAQAGAKVAALGRNQEKGDK-VAKEITALGGRAIALA 60

Query: 92  P--LDLSSLSSVRN-FVSQFHSLNLPLNLLINNAG---------KFAHQHA-------IS 132
              LD +SL   R   V+QF +    +++LIN AG            ++         + 
Sbjct: 61  ADVLDRASLERAREEIVAQFGT----VDILINGAGGNHPDATTDPEHYEPETEQNFFDLD 116

Query: 133 EDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRY--L 190
           E+G E  F  N  G FL +++  K M+E    +     I+N+SS         M  +  L
Sbjct: 117 EEGWEFVFDLNLNGSFLPSQVFGKDMLEQKGGS-----IINISS---------MNAFSPL 162

Query: 191 GQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRT----RLT 246
            ++           AY+ +K A    T+ LA         V VN + PG   T    +L 
Sbjct: 163 TKVP----------AYSAAKAAVSNFTQWLAVEFA--TTGVRVNAIAPGFFVTPQNRKLL 210

Query: 247 REREGFITD 255
              +G  TD
Sbjct: 211 INPDGSYTD 219

D-mannonate oxidoreductase catalyzes the NAD-dependent interconversion of D-mannonate and D-fructuronate. This subgroup includes Bacillus subtitils UxuB/YjmF, a putative D-mannonate oxidoreductase; the B. subtilis UxuB gene is part of a putative ten-gene operon (the Yjm operon) involved in hexuronate catabolism. Escherichia coli UxuB does not belong to this subgroup. This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 271

>gnl|CDD|213929 TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase

 Score = 65.4 bits (160), Expect = 2e-12
 Identities = 57/214 (26%), Positives = 89/214 (41%), Gaps = 32/214 (14%)

Query: 38  AIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSS 97
            ++TGA  GIG   AR LA+ GAR+    R+ +   E  A L     G       LD++ 
Sbjct: 1   VLVTGAAQGIGYAVARALAEAGARVAAVDRNFEQLLELVADLRRY--GYPFATYKLDVAD 58

Query: 98  LSSVRNFVSQFHSLNLPLNLLINNAG--KFAHQHAISEDGIEMTFATNYLGHFLLTKLLL 155
            ++V   V +      P+++L+N AG  +     ++S++  + TFA N  G F +++ + 
Sbjct: 59  SAAVDEVVQRLEREYGPIDVLVNVAGILRLGAIDSLSDEDWQATFAVNTFGVFNVSQAVS 118

Query: 156 KKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATR--AYALSKLAN 213
            +M          G IV V S                   N ++       AYA SK A 
Sbjct: 119 PRMKRRR-----SGAIVTVGS-------------------NAANVPRMGMAAYAASKAAL 154

Query: 214 VLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTR 247
            + TK L   L+     +  N V PG   T + R
Sbjct: 155 TMLTKCLG--LELAPYGIRCNVVSPGSTDTEMQR 186

Members of this family are 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase (EC 1.3.1.28), the third enzyme in the biosynthesis of 2,3-dihydroxybenzoic acid (DHB) from chorismate. The first two enzymes are isochorismate synthase (EC 5.4.4.2) and isochorismatase (EC 3.3.2.1). Synthesis is often followed by adenylation by the enzyme DHBA-AMP ligase (EC 2.7.7.58) to activate (DHB) for a non-ribosomal peptide synthetase. Length = 250

>gnl|CDD|219957 pfam08659, KR, KR domain

 Score = 63.7 bits (156), Expect = 3e-12
 Identities = 35/89 (39%), Positives = 54/89 (60%), Gaps = 2/89 (2%)

Query: 37  TAIITGATSGIGAETARVLAKRGAR-LVLPARSLKAAEEAKARLAS-DCPGSDIVVLPLD 94
           T ++TG   G+G E AR LA+RGAR LVL +RS     EA+A LA  +  G+++ V+  D
Sbjct: 2   TYLVTGGLGGLGLELARWLAERGARHLVLLSRSGAPDPEAEALLAELEARGAEVTVVACD 61

Query: 95  LSSLSSVRNFVSQFHSLNLPLNLLINNAG 123
           +S   +VR  +++  +   PL  +I+ AG
Sbjct: 62  VSDRDAVRALLAEIRADGPPLRGVIHAAG 90

This enzymatic domain is part of bacterial polyketide synthases and catalyzes the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. Length = 181

>gnl|CDD|180411 PRK06123, PRK06123, short chain dehydrogenase; Provisional

 Score = 65.2 bits (159), Expect = 3e-12
 Identities = 69/210 (32%), Positives = 97/210 (46%), Gaps = 26/210 (12%)

Query: 38  AIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSS 97
            IITGA+ GIGA TA + A+RG  + L     + A EA  +      G  + V   D++ 
Sbjct: 5   MIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAV-AADVAD 63

Query: 98  LSSV-RNFVSQFHSLNLPLNLLINNAGKFAHQHAISE-DGIEMT--FATNYLGHFLLTKL 153
            + V R F +    L   L+ L+NNAG    Q  + + D   +T  FATN +G FL  + 
Sbjct: 64  EADVLRLFEAVDRELG-RLDALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCARE 122

Query: 154 LLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLAN 213
            +K+M  + +  G  G IVNVSS         M   LG       + D    YA SK A 
Sbjct: 123 AVKRM--STRHGGRGGAIVNVSS---------MAARLGSPGE---YID----YAASKGAI 164

Query: 214 VLHTKELAQRLKQMEANVTVNCVHPGIVRT 243
              T  LA+ +      + VN V PG++ T
Sbjct: 165 DTMTIGLAKEVAAEG--IRVNAVRPGVIYT 192

Length = 248

>gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated

 Score = 66.8 bits (163), Expect = 4e-12
 Identities = 59/218 (27%), Positives = 91/218 (41%), Gaps = 34/218 (15%)

Query: 38  AIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSS 97
            ++TGA  GIG    +  A+ G ++V+  R+++ A E    L     G D   L +D+S 
Sbjct: 8   VLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSL-----GPDHHALAMDVSD 62

Query: 98  LSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHA----ISEDGIEMTFATNYLGHFLLTKL 153
            + +R    Q H     +++L+NNAG            + +      A N  G +L+ + 
Sbjct: 63  EAQIREGFEQLHREFGRIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVARE 122

Query: 154 LLKKMIETAKATGIQGR-IVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLA 212
            L+ MIE        G  IVNV+S             +    R         AY+ SK A
Sbjct: 123 ALRLMIE-----QGHGAAIVNVAS---------GAGLVALPKRT--------AYSASKAA 160

Query: 213 NVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRERE 250
            +  T+ LA         + VN V PG VRT++  E E
Sbjct: 161 VISLTRSLACEWAA--KGIRVNAVLPGYVRTQMVAELE 196

Length = 520

>gnl|CDD|181198 PRK08017, PRK08017, oxidoreductase; Provisional

 Score = 64.7 bits (158), Expect = 5e-12
 Identities = 67/213 (31%), Positives = 93/213 (43%), Gaps = 35/213 (16%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLS 96
           + +ITG +SGIG E A  L +RG R++   R  K  + A+              + LDL 
Sbjct: 4   SVLITGCSSGIGLEAALELKRRGYRVLAACR--KPDDVARMNSLGFTG------ILLDLD 55

Query: 97  SLSSVRNFVSQFHSL-NLPLNLLINNAG--KFAHQHAISEDGIEMTFATNYLGHFLLTKL 153
              SV     +  +L +  L  L NNAG   +     IS   +E  F+TN+ G   LT L
Sbjct: 56  DPESVERAADEVIALTDNRLYGLFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTML 115

Query: 154 LLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLAN 213
           LL  M+      G +GRIV  SS             +G IS          AYA SK A 
Sbjct: 116 LLPAML----PHG-EGRIVMTSS------------VMGLISTPGRG-----AYAASKYA- 152

Query: 214 VLHTKELAQRLKQMEANVTVNCVHPGIVRTRLT 246
            L     A R++   + + V+ + PG +RTR T
Sbjct: 153 -LEAWSDALRMELRHSGIKVSLIEPGPIRTRFT 184

Length = 256

>gnl|CDD|180604 PRK06523, PRK06523, short chain dehydrogenase; Provisional

 Score = 64.9 bits (159), Expect = 5e-12
 Identities = 54/219 (24%), Positives = 86/219 (39%), Gaps = 44/219 (20%)

Query: 32  NLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVL 91
            L+   A++TG T GIGA T   L + GAR+V  ARS             D     +  +
Sbjct: 6   ELAGKRALVTGGTKGIGAATVARLLEAGARVVTTARS-----------RPDDLPEGVEFV 54

Query: 92  PLDLSSLSSVRNFVSQFHSLNLPLNLLINNAGK-------FAHQHAISEDGIEMTFATNY 144
             DL++                 +++L++  G        FA   A++++  +     N 
Sbjct: 55  AADLTTAEGCAAVARAVLERLGGVDILVHVLGGSSAPAGGFA---ALTDEEWQDELNLNL 111

Query: 145 LGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATR 204
           L    L + LL  MI         G I++V+S                I R     ++T 
Sbjct: 112 LAAVRLDRALLPGMIARGS-----GVIIHVTS----------------IQRRLPLPESTT 150

Query: 205 AYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRT 243
           AYA +K A   ++K L++ +      V VN V PG + T
Sbjct: 151 AYAAAKAALSTYSKSLSKEVA--PKGVRVNTVSPGWIET 187

Length = 260

>gnl|CDD|236216 PRK08277, PRK08277, D-mannonate oxidoreductase; Provisional

 Score = 64.9 bits (159), Expect = 5e-12
 Identities = 44/167 (26%), Positives = 69/167 (41%), Gaps = 32/167 (19%)

Query: 31  PNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVV 90
            +L    A+ITG    +G   A+ LA+ GA++ +  R+ + AE   A +     G + + 
Sbjct: 6   FSLKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIK--AAGGEALA 63

Query: 91  LP---LDLSSLSSVRNFV-SQFHSLNLPLNLLINNAG---------KFAHQHA------- 130
           +    LD  SL   R  +   F     P ++LIN AG            H+         
Sbjct: 64  VKADVLDKESLEQARQQILEDFG----PCDILINGAGGNHPKATTDNEFHELIEPTKTFF 119

Query: 131 -ISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSS 176
            + E+G E  F  N LG  L T++  K M+           I+N+SS
Sbjct: 120 DLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRKGGN-----IINISS 161

Length = 278

>gnl|CDD|188170 TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogenase

 Score = 64.0 bits (156), Expect = 8e-12
 Identities = 57/217 (26%), Positives = 90/217 (41%), Gaps = 29/217 (13%)

Query: 32  NLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVL 91
           +L    A++TGA +G+G   A  LA+ GA +V   RS     E + ++ +   G   + L
Sbjct: 2   SLEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRS--EPSETQQQVEAL--GRRFLSL 57

Query: 92  PLDLSSLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAI--SEDGIEMTFATNYLGHFL 149
             DLS + +++  V         +++L+NNAG      A   SE   +     N    F 
Sbjct: 58  TADLSDIEAIKALVDSAVEEFGHIDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFF 117

Query: 150 LTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALS 209
           LT+   K  +      G  G+I+N++S         M+ + G I           +Y  S
Sbjct: 118 LTQAAAKHFL----KQGRGGKIINIAS---------MLSFQGGIR--------VPSYTAS 156

Query: 210 KLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLT 246
           K A    TK LA         + VN + PG + T  T
Sbjct: 157 KHAVAGLTKLLANEWAA--KGINVNAIAPGYMATNNT 191

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 248

>gnl|CDD|181113 PRK07775, PRK07775, short chain dehydrogenase; Provisional

 Score = 64.0 bits (156), Expect = 1e-11
 Identities = 63/221 (28%), Positives = 95/221 (42%), Gaps = 40/221 (18%)

Query: 31  PNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVV 90
           P+     A++ GA+SGIGA TA  LA  G  + L AR ++  EE   ++ +D  G + V 
Sbjct: 6   PHPDRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRAD--GGEAVA 63

Query: 91  LPLDLSSLSSVRNFVSQFHSLNLPLNLLINNAGK--FAHQHAISEDGIEMTFATNYLGHF 148
            PLD++   SV++FV+Q       + +L++ AG   F   H IS +  E     + +G  
Sbjct: 64  FPLDVTDPDSVKSFVAQAEEALGEIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGAN 123

Query: 149 LLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSH---YDATRA 205
            L   +L  MIE  +     G ++ V S +                R + H   Y A +A
Sbjct: 124 RLATAVLPGMIERRR-----GDLIFVGSDV--------------ALRQRPHMGAYGAAKA 164

Query: 206 YALSKLANVLHTKELAQRLKQME---ANVTVNCVHPGIVRT 243
             L  +   L          QME     V  + VHPG   T
Sbjct: 165 -GLEAMVTNL----------QMELEGTGVRASIVHPGPTLT 194

Length = 274

>gnl|CDD|187634 cd08929, SDR_c4, classical (c) SDR, subgroup 4

 Score = 63.3 bits (154), Expect = 1e-11
 Identities = 57/216 (26%), Positives = 81/216 (37%), Gaps = 31/216 (14%)

Query: 38  AIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSS 97
           A++TGA+ GIG  TAR+L   G R+ + AR       A A+      G     L  D+  
Sbjct: 3   ALVTGASRGIGEATARLLHAEGYRVGICARDEARLAAAAAQELEGVLG-----LAGDVRD 57

Query: 98  LSSVRNFVSQFHSLNLPLNLLINNAGK--FAHQHAISEDGIEMTFATNYLGHFLLTKLLL 155
            + VR  V         L+ L+NNAG         ++ +   +   TN  G F       
Sbjct: 58  EADVRRAVDAMEEAFGGLDALVNNAGVGVMKPVEELTPEEWRLVLDTNLTGAFYCI---- 113

Query: 156 KKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLANVL 215
            K        G  G IVNV S      +G            K+ +    AY  SK   + 
Sbjct: 114 HKAAPALLRRG-GGTIVNVGS-----LAG------------KNAFKGGAAYNASKFGLLG 155

Query: 216 HTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREG 251
            ++     L++   N+ V  V PG V T      EG
Sbjct: 156 LSEAAMLDLREA--NIRVVNVMPGSVDTGFAGSPEG 189

This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 226

>gnl|CDD|187647 cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase, classical (c) SDRs

 Score = 63.6 bits (155), Expect = 1e-11
 Identities = 60/221 (27%), Positives = 96/221 (43%), Gaps = 43/221 (19%)

Query: 38  AIITGATSGIGAETARVLAKRGARLVL----PARSLKAAEEAKARLASDCPGSDIVVLPL 93
           A++TG  SGIG   A+ LA  GA +V+    P  + K AE A+        G   + +  
Sbjct: 4   ALVTGGASGIGLAIAKRLAAEGAAVVVADIDPEIAEKVAEAAQG-------GPRALGVQC 56

Query: 94  DLSSLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAISEDGIEM---TFATNYLGHFLL 150
           D++S + V++   Q       L+++++NAG  A    I+E  +E    +   N  GHFL+
Sbjct: 57  DVTSEAQVQSAFEQAVLEFGGLDIVVSNAG-IATSSPIAETSLEDWNRSMDINLTGHFLV 115

Query: 151 TKLLLKKMIETAKATGIQGRIVNVSS--SIHSWFSGDMIRYLGQISRNKSHYDATRAYAL 208
           ++   + M    K+ GI G IV  +S  ++                 N + Y A +A A 
Sbjct: 116 SREAFRIM----KSQGIGGNIVFNASKNAVAP-------------GPNAAAYSAAKA-AE 157

Query: 209 SKLANVLHTKELAQRLKQMEANVTVNCVHP-GIVRTRLTRE 248
           + LA  L   E        E  + VN V+P  + R     E
Sbjct: 158 AHLARCL-ALEGG------EDGIRVNTVNPDAVFRGSKIWE 191

This family has bifunctional proteins with an N-terminal aldolase and a C-terminal classical SDR domain. One member is identified as a rhamnulose-1-phosphate aldolase/alcohol dehydrogenase. The SDR domain has a canonical SDR glycine-rich NAD(P) binding motif and a match to the characteristic active site triad. However, it lacks an upstream active site Asn typical of SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|180993 PRK07478, PRK07478, short chain dehydrogenase; Provisional

 Score = 63.4 bits (155), Expect = 1e-11
 Identities = 60/226 (26%), Positives = 93/226 (41%), Gaps = 36/226 (15%)

Query: 33  LSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLP 92
           L+   AIITGA+SGIG   A++ A+ GA++V+ AR     ++  A + ++  G + V L 
Sbjct: 4   LNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAE--GGEAVALA 61

Query: 93  LDLSSLSS----VRNFVSQFHSLNLPLNLLINNA---GKFAHQHAISEDGIEMTFATNYL 145
            D+   +     V   V +F  L++      NNA   G+      +S +G   T ATN  
Sbjct: 62  GDVRDEAYAKALVALAVERFGGLDIA----FNNAGTLGEMGPVAEMSLEGWRETLATNLT 117

Query: 146 GHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRA 205
             FL  K  +  M+         G ++  S+     F G    + G             A
Sbjct: 118 SAFLGAKHQIPAMLARGG-----GSLIFTST-----FVGHTAGFPG-----------MAA 156

Query: 206 YALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREG 251
           YA SK   +  T+ LA         + VN + PG   T + R    
Sbjct: 157 YAASKAGLIGLTQVLAAEYGA--QGIRVNALLPGGTDTPMGRAMGD 200

Length = 254

>gnl|CDD|187629 cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydrogenase type 10 (HSD10)-like, classical (c) SDRs

 Score = 62.7 bits (153), Expect = 2e-11
 Identities = 52/219 (23%), Positives = 90/219 (41%), Gaps = 34/219 (15%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLS 96
            A++TG  SG+G  T   L  +GA++V+        E   A+L  +C       +P+D++
Sbjct: 4   VAVVTGGASGLGLATVERLLAQGAKVVILDLPNSPGETV-AKLGDNC-----RFVPVDVT 57

Query: 97  SLSSVRNFVSQFHSLNLPLNLLINNAG--------KFAHQHAISEDGIEMTFATNYLGHF 148
           S   V+  ++   +    L++++N AG            Q   S +  +     N +G F
Sbjct: 58  SEKDVKAALALAKAKFGRLDIVVNCAGIAVAAKTYNKKGQQPHSLELFQRVINVNLIGTF 117

Query: 149 LLTKLLLKKMIETAK-ATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYA 207
            + +L    M +      G +G I+N +S   + F G +    GQ            AY+
Sbjct: 118 NVIRLAAGAMGKNEPDQGGERGVIINTASV--AAFEGQI----GQA-----------AYS 160

Query: 208 LSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLT 246
            SK   V  T  +A+ L      + V  + PG+  T L 
Sbjct: 161 ASKGGIVGMTLPIARDLAPQ--GIRVVTIAPGLFDTPLL 197

HSD10, also known as amyloid-peptide-binding alcohol dehydrogenase (ABAD), was previously identified as a L-3-hydroxyacyl-CoA dehydrogenase, HADH2. In fatty acid metabolism, HADH2 catalyzes the third step of beta-oxidation, the conversion of a hydroxyl to a keto group in the NAD-dependent oxidation of L-3-hydroxyacyl CoA. In addition to alcohol dehydrogenase and HADH2 activites, HSD10 has steroid dehydrogenase activity. Although the mechanism is unclear, HSD10 is implicated in the formation of amyloid beta-petide in the brain (which is linked to the development of Alzheimer's disease). Although HSD10 is normally concentrated in the mitochondria, in the presence of amyloid beta-peptide it translocates into the plasma membrane, where it's action may generate cytotoxic aldehydes and may lower estrogen levels through its use of 17-beta-estradiol as a substrate. HSD10 is a member of the SRD family, but differs from other SDRs by the presence of two insertions of unknown function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 252

>gnl|CDD|235933 PRK07097, PRK07097, gluconate 5-dehydrogenase; Provisional

 Score = 62.4 bits (152), Expect = 3e-11
 Identities = 58/224 (25%), Positives = 95/224 (42%), Gaps = 31/224 (13%)

Query: 32  NLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVL 91
           +L    A+ITGA+ GIG   A+  AK GA +V    + +  ++  A       G +    
Sbjct: 7   SLKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYREL--GIEAHGY 64

Query: 92  PLDLSSLSSVRNFVSQFHSLNLPLNLLINNAG--KFAHQHAISEDGIEMTFATNYLGHFL 149
             D++    V+  VSQ       +++L+NNAG  K      +S +        +    F+
Sbjct: 65  VCDVTDEDGVQAMVSQIEKEVGVIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFI 124

Query: 150 LTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALS 209
           ++K ++  MI+        G+I+N+ S         M+  LG   R         AYA +
Sbjct: 125 VSKAVIPSMIKKG-----HGKIINICS---------MMSELG---RE-----TVSAYAAA 162

Query: 210 KLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLT---RERE 250
           K    + TK +A      EAN+  N + PG + T  T   RE +
Sbjct: 163 KGGLKMLTKNIASEYG--EANIQCNGIGPGYIATPQTAPLRELQ 204

Length = 265

>gnl|CDD|132250 TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

 Score = 62.2 bits (151), Expect = 3e-11
 Identities = 61/215 (28%), Positives = 91/215 (42%), Gaps = 28/215 (13%)

Query: 33  LSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLP 92
           L   TAI+TG   GIG  T R  A+ GA++ +   + +AAE+  A + +   G +     
Sbjct: 1   LKDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRA--KGGNAQAFA 58

Query: 93  LDLSSLSSVRNFVSQFHSLNLPLNLLINNAG--KFAHQHAISEDGIEMTFATNYLGHFLL 150
            D++   SV   V+       P+++L+NNAG  KF           E   A N  G   +
Sbjct: 59  CDITDRDSVDTAVAAAEQALGPVDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHM 118

Query: 151 TKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSK 210
              +L  M+E        GRIVN++S                 +R  S  +A   YA  K
Sbjct: 119 HHAVLPGMVERG-----AGRIVNIASD---------------AARVGSSGEAV--YAACK 156

Query: 211 LANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRL 245
              V  +K +A+   +    +TVN V PG   T L
Sbjct: 157 GGLVAFSKTMAREHARHG--ITVNVVCPGPTDTAL 189

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. Length = 250

>gnl|CDD|184025 PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenase; Provisional

 Score = 62.6 bits (152), Expect = 3e-11
 Identities = 62/218 (28%), Positives = 98/218 (44%), Gaps = 31/218 (14%)

Query: 32  NLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVL 91
           NL+  TA++TGA SGIG E A  LA+ GA + +   +   A      +     G   + +
Sbjct: 4   NLNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINK--AGGKAIGV 61

Query: 92  PLDLSSLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAIS----EDGIEMTFATNYLGH 147
            +D+++  +V   + +       +++L++NAG     + I      D  +M  A +  G 
Sbjct: 62  AMDVTNEDAVNAGIDKVAERFGSVDILVSNAG-IQIVNPIENYSFADWKKMQ-AIHVDGA 119

Query: 148 FLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYA 207
           FL TK  LK M +  +     G ++ +  S+HS  +          S  KS Y   + + 
Sbjct: 120 FLTTKAALKHMYKDDRG----GVVIYM-GSVHSHEA----------SPLKSAYVTAK-HG 163

Query: 208 LSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRL 245
           L  LA VL  KE A+       NV  + V PG VRT L
Sbjct: 164 LLGLARVL-AKEGAKH------NVRSHVVCPGFVRTPL 194

Length = 262

>gnl|CDD|181225 PRK08085, PRK08085, gluconate 5-dehydrogenase; Provisional

 Score = 62.1 bits (151), Expect = 3e-11
 Identities = 58/222 (26%), Positives = 97/222 (43%), Gaps = 38/222 (17%)

Query: 33  LSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLP 92
           L+    +ITG+  GIG   A  LA+ GA +++   + + AE A A+L  +  G      P
Sbjct: 7   LAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQE--GIKAHAAP 64

Query: 93  LDLSSLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAISE---DGIEMTFATNYLGHFL 149
            +++    V   +        P+++LINNAG    +H  +E          A N    FL
Sbjct: 65  FNVTHKQEVEAAIEHIEKDIGPIDVLINNAG-IQRRHPFTEFPEQEWNDVIAVNQTAVFL 123

Query: 150 LTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALS 209
           +++ + + M++        G+I+N+ S         M   LG+        D    YA S
Sbjct: 124 VSQAVARYMVKRQ-----AGKIINICS---------MQSELGR--------DTITPYAAS 161

Query: 210 KLANVLHTK----ELAQRLKQMEANVTVNCVHPGIVRTRLTR 247
           K A  + T+    ELA+       N+ VN + PG  +T +T+
Sbjct: 162 KGAVKMLTRGMCVELARH------NIQVNGIAPGYFKTEMTK 197

Length = 254

>gnl|CDD|187591 cd05330, cyclohexanol_reductase_SDR_c, cyclohexanol reductases, including levodione reductase, classical (c) SDRs

 Score = 62.2 bits (151), Expect = 4e-11
 Identities = 59/213 (27%), Positives = 94/213 (44%), Gaps = 27/213 (12%)

Query: 39  IITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSL 98
           +ITG  SG+G  TA  LAK GA+L L   + +  E AKA L    P ++++++  D+S  
Sbjct: 7   LITGGGSGLGLATAVRLAKEGAKLSLVDLNEEGLEAAKAALLEIAPDAEVLLIKADVSDE 66

Query: 99  SSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAISE---DGIEMTFATNYLGHFLLTKLLL 155
           + V  +V         ++   NNAG    Q+   +   D  +   + N  G F   + +L
Sbjct: 67  AQVEAYVDATVEQFGRIDGFFNNAGIEGKQNLTEDFGADEFDKVVSINLRGVFYGLEKVL 126

Query: 156 KKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLANVL 215
           K M E        G IVN +S       G  IR +G    N+S       YA +K   V 
Sbjct: 127 KVMREQG-----SGMIVNTAS-----VGG--IRGVG----NQS------GYAAAKHGVVG 164

Query: 216 HTKELAQRLKQMEANVTVNCVHPGIVRTRLTRE 248
            T+  A  ++  +  + +N + PG + T +   
Sbjct: 165 LTRNSA--VEYGQYGIRINAIAPGAILTPMVEG 195

Cyloclohexanol reductases,including (6R)-2,2,6-trimethyl-1,4-cyclohexanedione (levodione) reductase of Corynebacterium aquaticum, catalyze the reversible oxidoreduction of hydroxycyclohexanone derivatives. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|180440 PRK06172, PRK06172, short chain dehydrogenase; Provisional

 Score = 62.1 bits (151), Expect = 4e-11
 Identities = 58/218 (26%), Positives = 90/218 (41%), Gaps = 29/218 (13%)

Query: 33  LSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLP 92
            S   A++TG  +GIG  TA   A+ GA++V+  R     EE    L  +  G + + + 
Sbjct: 5   FSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEET-VALIREA-GGEALFVA 62

Query: 93  LDLSSLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAI---SEDGIEMTFATNYLGHFL 149
            D++  + V+  V Q  +    L+   NNAG    Q  +   SE   +     N  G +L
Sbjct: 63  CDVTRDAEVKALVEQTIAAYGRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWL 122

Query: 150 LTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALS 209
             K  +  M+    A G  G IVN +S              G  +  K        YA S
Sbjct: 123 CMKYQIPLML----AQG-GGAIVNTASV------------AGLGAAPKM-----SIYAAS 160

Query: 210 KLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTR 247
           K A +  TK  A  ++  +  + VN V P ++ T + R
Sbjct: 161 KHAVIGLTKSAA--IEYAKKGIRVNAVCPAVIDTDMFR 196

Length = 253

>gnl|CDD|187592 cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydrozybenzoate dehydrogenases, classical (c) SDRs

 Score = 61.7 bits (150), Expect = 4e-11
 Identities = 59/214 (27%), Positives = 86/214 (40%), Gaps = 39/214 (18%)

Query: 38  AIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSS 97
            I+TGA  GIG   AR L + GA ++  A  L      +        G  + + PLD++ 
Sbjct: 1   VIVTGAAQGIGRAVARHLLQAGATVI--ALDLPFVLLLE-------YGDPLRLTPLDVAD 51

Query: 98  LSSVRNFVSQFHSLNLPLNLLINNAG--KFAHQHAISEDGIEMTFATNYLGHFLLTKLLL 155
            ++VR   S+  + + P++ L+N AG  +      +S +  E TFA N  G F L + + 
Sbjct: 52  AAAVREVCSRLLAEHGPIDALVNCAGVLRPGATDPLSTEDWEQTFAVNVTGVFNLLQAVA 111

Query: 156 KKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATR--AYALSKLAN 213
             M    K     G IV V+S                   N +H       AY  SK A 
Sbjct: 112 PHM----KDRR-TGAIVTVAS-------------------NAAHVPRISMAAYGASKAAL 147

Query: 214 VLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTR 247
              +K L   L+     V  N V PG   T + R
Sbjct: 148 ASLSKCLG--LELAPYGVRCNVVSPGSTDTAMQR 179

2,3 dihydro-2,3 dihydrozybenzoate dehydrogenase shares the characteristics of the classical SDRs. This subgroup includes Escherichai coli EntA which catalyzes the NAD+-dependent oxidation of 2,3-dihydro-2,3-dihydroxybenzoate to 2,3-dihydroxybenzoate during biosynthesis of the siderophore Enterobactin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244

>gnl|CDD|236207 PRK08261, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 62.9 bits (154), Expect = 5e-11
 Identities = 69/219 (31%), Positives = 101/219 (46%), Gaps = 45/219 (20%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVL---PARSLKAAEEAKARLASDCPGSDIVVLPL 93
            A++TGA  GIGA  A VLA+ GA +V    P     AA EA A +A+   G+    L L
Sbjct: 212 VALVTGAARGIGAAIAEVLARDGAHVVCLDVP-----AAGEALAAVANRVGGT---ALAL 263

Query: 94  DLSSLSSVRNFVSQFHSLNLPLNLLINNAG-----KFAHQHAISEDGIEMTFATNYLGHF 148
           D+++  +           +  L+++++NAG       A+   + E   +   A N L   
Sbjct: 264 DITAPDAPARIAEHLAERHGGLDIVVHNAGITRDKTLAN---MDEARWDSVLAVNLLAPL 320

Query: 149 LLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYAL 208
            +T+ LL      A A G  GRIV VSS   S  +G+     GQ +           YA 
Sbjct: 321 RITEALLA-----AGALGDGGRIVGVSSI--SGIAGN----RGQTN-----------YAA 358

Query: 209 SKLANVL-HTKELAQRLKQMEANVTVNCVHPGIVRTRLT 246
           SK A V+   + LA  L   E  +T+N V PG + T++T
Sbjct: 359 SK-AGVIGLVQALAPLLA--ERGITINAVAPGFIETQMT 394

Length = 450

>gnl|CDD|180462 PRK06198, PRK06198, short chain dehydrogenase; Provisional

 Score = 61.9 bits (151), Expect = 5e-11
 Identities = 44/142 (30%), Positives = 65/142 (45%), Gaps = 9/142 (6%)

Query: 38  AIITGATSGIGAETARVLAKRGAR-LVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLS 96
           A++TG T G+GA  AR  A+RGA  LV+  R+ +  E   A L +   G+  V +  DLS
Sbjct: 9   ALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEA--LGAKAVFVQADLS 66

Query: 97  SLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAI--SEDGIEMTFATNYLGHFLLTKLL 154
            +   R  V+        L+ L+N AG       +  S +  +  FA N    F L +  
Sbjct: 67  DVEDCRRVVAAADEAFGRLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEA 126

Query: 155 LKKMIETAKATGIQGRIVNVSS 176
           +K M         +G IVN+ S
Sbjct: 127 IKLMRR----RKAEGTIVNIGS 144

Length = 260

>gnl|CDD|181139 PRK07832, PRK07832, short chain dehydrogenase; Provisional

 Score = 62.0 bits (151), Expect = 5e-11
 Identities = 37/147 (25%), Positives = 60/147 (40%), Gaps = 19/147 (12%)

Query: 38  AIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSS 97
             +TGA SGIG  TA  LA +GA L L  R      +     A    G+      LD+S 
Sbjct: 3   CFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQT-VADARALGGTVPEHRALDISD 61

Query: 98  LSSVRNFVSQFHSLNLPLNLLINNAG--------KFAHQHAISEDGIEMTFATNYLGHFL 149
             +V  F +  H+ +  +++++N AG        +  H+              N +G   
Sbjct: 62  YDAVAAFAADIHAAHGSMDVVMNIAGISAWGTVDRLTHEQWRR------MVDVNLMGPIH 115

Query: 150 LTKLLLKKMIETAKATGIQGRIVNVSS 176
           + +  +  M+   +     G +VNVSS
Sbjct: 116 VIETFVPPMVAAGRG----GHLVNVSS 138

Length = 272

>gnl|CDD|235713 PRK06139, PRK06139, short chain dehydrogenase; Provisional

 Score = 62.4 bits (152), Expect = 6e-11
 Identities = 42/123 (34%), Positives = 64/123 (52%), Gaps = 26/123 (21%)

Query: 39  IITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCP--GSDIVVLPLDLS 96
           +ITGA+SGIG  TA   A+RGARLVL AR     EEA   +A +C   G++++V+P D++
Sbjct: 11  VITGASSGIGQATAEAFARRGARLVLAARD----EEALQAVAEECRALGAEVLVVPTDVT 66

Query: 97  SLSSVRNFVSQFHSLNLPLNLLINNA-----GKF------AHQHAISEDGIEMTFATNYL 145
               V+   +Q  S    +++ +NN      G+F      AH+  I          TN +
Sbjct: 67  DADQVKALATQAASFGGRIDVWVNNVGVGAVGRFEETPIEAHEQVIQ---------TNLI 117

Query: 146 GHF 148
           G+ 
Sbjct: 118 GYM 120

Length = 330

>gnl|CDD|181762 PRK09291, PRK09291, short chain dehydrogenase; Provisional

 Score = 61.6 bits (150), Expect = 6e-11
 Identities = 58/220 (26%), Positives = 88/220 (40%), Gaps = 56/220 (25%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAA----EEAKARLASDCPGSDIVVLP 92
           T +ITGA SG G E A  LA++G  ++   +          EA  R      G  + V  
Sbjct: 4   TILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARR------GLALRVEK 57

Query: 93  LDLSSLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAISEDG----IEM-----TFATN 143
           LDL+             +    +++L+NNAG       I E G    I +      F TN
Sbjct: 58  LDLTDAIDRA------QAAEWDVDVLLNNAG-------IGEAGAVVDIPVELVRELFETN 104

Query: 144 YLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDAT 203
             G   LT+  ++KM+   K     G++V   SS+    +G    + G        Y A+
Sbjct: 105 VFGPLELTQGFVRKMVARGK-----GKVVFT-SSMAGLITGP---FTGA-------YCAS 148

Query: 204 RAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRT 243
           + +AL  +A  +H  EL          + V  V+PG   T
Sbjct: 149 K-HALEAIAEAMH-AELK------PFGIQVATVNPGPYLT 180

Length = 257

>gnl|CDD|183832 PRK12935, PRK12935, acetoacetyl-CoA reductase; Provisional

 Score = 61.2 bits (148), Expect = 7e-11
 Identities = 59/219 (26%), Positives = 94/219 (42%), Gaps = 29/219 (13%)

Query: 33  LSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLP 92
           L+   AI+TG   GIG      LA+ GA++V+   S K A E          G D+  + 
Sbjct: 4   LNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGK-EGHDVYAVQ 62

Query: 93  LDLSSLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLL 150
            D+S +      V +  +    +++L+NNAG    +    ++ +  E     N    F  
Sbjct: 63  ADVSKVEDANRLVEEAVNHFGKVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNT 122

Query: 151 TKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISR-NKSHYDATRAYALS 209
           T  +L  + E       +GRI+++SS I            GQ     +++Y A +A  L 
Sbjct: 123 TSAVLPYITEAE-----EGRIISISSII------------GQAGGFGQTNYSAAKAGMLG 165

Query: 210 KLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRE 248
                  TK LA  L+  + NVTVN + PG + T +  E
Sbjct: 166 ------FTKSLA--LELAKTNVTVNAICPGFIDTEMVAE 196

Length = 247

>gnl|CDD|235693 PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 61.3 bits (149), Expect = 8e-11
 Identities = 58/213 (27%), Positives = 93/213 (43%), Gaps = 34/213 (15%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKA--RLASDCPGSDIVVLPLD 94
             ++TG+  GIG   A  LAK G+ +V+ A+  K AEE     ++  +  G  I VL  D
Sbjct: 8   VVVVTGSGRGIGRAIAVRLAKEGSLVVVNAK--KRAEEMNETLKMVKENGGEGIGVLA-D 64

Query: 95  LSSLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAISEDG--IEMTFATNYLGHFLLTK 152
           +S+                  ++L+NNAG       ++ D   I+   +T++      ++
Sbjct: 65  VSTREGCETLAKATIDRYGVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQ 124

Query: 153 LLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLA 212
            L K+M E        G IVN++S      +G    Y   I      Y A +A A+  L 
Sbjct: 125 ELAKEMREG-------GAIVNIAS-----VAGIRPAYGLSI------YGAMKA-AVINLT 165

Query: 213 NVLHTKELAQRLKQMEANVTVNCVHPGIVRTRL 245
             L   ELA +++       VN + PG V+T+L
Sbjct: 166 KYL-ALELAPKIR-------VNAIAPGFVKTKL 190

Length = 252

>gnl|CDD|181668 PRK09135, PRK09135, pteridine reductase; Provisional

 Score = 61.1 bits (149), Expect = 8e-11
 Identities = 55/209 (26%), Positives = 87/209 (41%), Gaps = 30/209 (14%)

Query: 34  SSVTAIITGATSGIGAETARVLAKRGARLVLPAR-SLKAAEEAKARLASDCPGSDIVVLP 92
           S+  A+ITG    IGA  AR L   G R+ +    S   A+   A L +  PGS   +  
Sbjct: 5   SAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQA 64

Query: 93  LDLSSLSSVRNFVSQFHSLNLPLNLLINNAGKF--AHQHAISEDGIEMTFATNYLGHFLL 150
            DL    ++   V+   +    L+ L+NNA  F      +I+E   +  FA+N    F L
Sbjct: 65  -DLLDPDALPELVAACVAAFGRLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFL 123

Query: 151 TKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSK 210
           ++    ++ +       +G IVN+ + IH+     +  Y                Y  +K
Sbjct: 124 SQAAAPQLRKQ------RGAIVNI-TDIHA--ERPLKGYP--------------VYCAAK 160

Query: 211 LANVLHTKELAQRLKQMEANVTVNCVHPG 239
            A  + T+ LA    ++   V VN V PG
Sbjct: 161 AALEMLTRSLA---LELAPEVRVNAVAPG 186

Length = 249

>gnl|CDD|183718 PRK12746, PRK12746, short chain dehydrogenase; Provisional

 Score = 60.8 bits (147), Expect = 1e-10
 Identities = 64/223 (28%), Positives = 102/223 (45%), Gaps = 41/223 (18%)

Query: 32  NLSSVTAIITGATSGIGAETARVLAKRGARLVLP-ARSLKAAEEAKARLASDCPGSDIVV 90
           NL    A++TGA+ GIG   A  LA  GA + +   R+ +AA+E    + S+  G    +
Sbjct: 3   NLDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESN--GGKAFL 60

Query: 91  LPLDLSSLSSVRNFVSQF-HSLNL-----PLNLLINNAGKFAHQHAI---SEDGIEMTFA 141
           +  DL+S+  V+  V Q  + L +      +++L+NNAG    Q  I   +E+  +   A
Sbjct: 61  IEADLNSIDGVKKLVEQLKNELQIRVGTSEIDILVNNAG-IGTQGTIENTTEEIFDEIMA 119

Query: 142 TNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSS-IHSWFSGDMIRYLGQISRNKSHY 200
            N    F L +       +T      +GR++N+SS+ +   F+G +              
Sbjct: 120 VNIKAPFFLIQ-------QTLPLLRAEGRVINISSAEVRLGFTGSI-------------- 158

Query: 201 DATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRT 243
               AY LSK A    T  LA+ L   E  +TVN + PG  +T
Sbjct: 159 ----AYGLSKGALNTMTLPLAKHLG--ERGITVNTIMPGYTKT 195

Length = 254

>gnl|CDD|235628 PRK05855, PRK05855, short chain dehydrogenase; Validated

 Score = 61.9 bits (151), Expect = 1e-10
 Identities = 59/214 (27%), Positives = 90/214 (42%), Gaps = 31/214 (14%)

Query: 38  AIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSS 97
            ++TGA SGIG ETA   A+ GA +V       AAE   A L     G+      +D+S 
Sbjct: 318 VVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERT-AELIRAA-GAVAHAYRVDVSD 375

Query: 98  LSSVRNFVSQFHS-LNLPLNLLINNAGKFAHQHAI---SEDGIEMTFATNYLGHFLLTKL 153
             ++  F     +   +P ++++NNAG           S +  +     N  G     +L
Sbjct: 376 ADAMEAFAEWVRAEHGVP-DIVVNNAG-IGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRL 433

Query: 154 LLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLAN 213
             ++M+E  + TG  G IVNV+S            Y    SR+   Y  ++A A+  L+ 
Sbjct: 434 FGRQMVE--RGTG--GHIVNVAS---------AAAYAP--SRSLPAYATSKA-AVLMLSE 477

Query: 214 VLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTR 247
            L   ELA       A + V  + PG V T +  
Sbjct: 478 CLRA-ELA------AAGIGVTAICPGFVDTNIVA 504

Length = 582

>gnl|CDD|180458 PRK06194, PRK06194, hypothetical protein; Provisional

 Score = 60.8 bits (148), Expect = 2e-10
 Identities = 55/213 (25%), Positives = 82/213 (38%), Gaps = 28/213 (13%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLS 96
            A+ITGA SG G   AR+ A  G +LVL      A + A A L +   G++++ +  D+S
Sbjct: 8   VAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQ--GAEVLGVRTDVS 65

Query: 97  SLSSVRNFVSQ-FHSLNLPLNLLINNAG----KFAHQHAISEDGIEMTFATNYLGHFLLT 151
             + V               +LL NNAG        ++  S    E     N  G     
Sbjct: 66  DAAQVEALADAALERFGAV-HLLFNNAGVGAGGLVWEN--SLADWEWVLGVNLWGVIHGV 122

Query: 152 KLLLKKMIETAKA-TGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSK 210
           +     M+  A+     +G IVN +S              G ++       A   Y +SK
Sbjct: 123 RAFTPLMLAAAEKDPAYEGHIVNTASMA------------GLLAP-----PAMGIYNVSK 165

Query: 211 LANVLHTKELAQRLKQMEANVTVNCVHPGIVRT 243
            A V  T+ L Q L  +   V  + + P  V T
Sbjct: 166 HAVVSLTETLYQDLSLVTDQVGASVLCPYFVPT 198

Length = 287

>gnl|CDD|187617 cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_coenzyme A_reductase (ChcA)_like, classical (c) SDRs

 Score = 60.1 bits (146), Expect = 2e-10
 Identities = 57/209 (27%), Positives = 84/209 (40%), Gaps = 29/209 (13%)

Query: 38  AIITGATSGIGAETARVLAKRGARLVLP-ARSLKAAEEAKARLASDCPGSDIVVLPLDLS 96
           A++TG + GIG   A  LA+RGA +V+   +S  AA E  A +     G   VV+  D+S
Sbjct: 1   ALVTGGSRGIGKAIALRLAERGADVVINYRKSKDAAAEVAAEIEEL--GGKAVVVRADVS 58

Query: 97  SLSSVRNFVSQFHSLNLPLNLLINNA--GKFAHQHAISEDGIEMTFATNYLGHFLLTKLL 154
               V    +        L++L++NA  G F     ++    +    TN        +  
Sbjct: 59  QPQDVEEMFAAVKERFGRLDVLVSNAAAGAFRPLSELTPAHWDAKMNTNLKALVHCAQQA 118

Query: 155 LKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLANV 214
            K M    +  G  GRIV +SS   S  +      +G            +A AL  L   
Sbjct: 119 AKLM---RERGG--GRIVAISSL-GSIRALPNYLAVG----------TAKA-ALEALVRY 161

Query: 215 LHTKELAQRLKQMEANVTVNCVHPGIVRT 243
           L   EL  R       + VN V PG++ T
Sbjct: 162 L-AVELGPR------GIRVNAVSPGVIDT 183

This subgroup contains classical SDR proteins, including members identified as 1-cyclohexenylcarbonyl coenzyme A reductase. ChcA of Streptomyces collinus is implicated in the final reduction step of shikimic acid to ansatrienin. ChcA shows sequence similarity to the SDR family of NAD-binding proteins, but it lacks the conserved Tyr of the characteristic catalytic site. This subgroup also contains the NADH-dependent enoyl-[acyl-carrier-protein(ACP)] reductase FabL from Bacillus subtilis. This enzyme participates in bacterial fatty acid synthesis, in type II fatty-acid synthases and catalyzes the last step in each elongation cycle. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242

>gnl|CDD|181585 PRK08936, PRK08936, glucose-1-dehydrogenase; Provisional

 Score = 60.5 bits (147), Expect = 2e-10
 Identities = 58/226 (25%), Positives = 96/226 (42%), Gaps = 36/226 (15%)

Query: 31  PNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARS-----LKAAEEAKARLASDCPG 85
            +L     +ITG ++G+G   A    K  A++V+  RS        AEE K        G
Sbjct: 3   SDLEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKA------G 56

Query: 86  SDIVVLPLDLSSLSSVRNFVSQFHSLNLPLNLLINNAG--KFAHQHAISEDGIEMTFATN 143
            + + +  D++  S V N +         L+++INNAG       H +S +       TN
Sbjct: 57  GEAIAVKGDVTVESDVVNLIQTAVKEFGTLDVMINNAGIENAVPSHEMSLEDWNKVINTN 116

Query: 144 YLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDAT 203
             G FL ++  +K  +E      I+G I+N+ SS+H     + I +   +          
Sbjct: 117 LTGAFLGSREAIKYFVE----HDIKGNIINM-SSVH-----EQIPWPLFVH--------- 157

Query: 204 RAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRER 249
             YA SK    L T+ LA  ++     + VN + PG + T +  E+
Sbjct: 158 --YAASKGGVKLMTETLA--MEYAPKGIRVNNIGPGAINTPINAEK 199

Length = 261

>gnl|CDD|236094 PRK07774, PRK07774, short chain dehydrogenase; Provisional

 Score = 60.1 bits (146), Expect = 2e-10
 Identities = 60/220 (27%), Positives = 94/220 (42%), Gaps = 42/220 (19%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLS 96
            AI+TGA  GIG   A  LA+ GA +V+   + + AE    ++ +D  G   + + +D+S
Sbjct: 8   VAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVAD--GGTAIAVQVDVS 65

Query: 97  SLSSVRNF----VSQFHSLNLPLNLLINNAGKFAHQH-----AISEDGIEMTFATNYLGH 147
              S +      VS F      ++ L+NNA  +          +  D  +   + N  G 
Sbjct: 66  DPDSAKAMADATVSAFGG----IDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGA 121

Query: 148 FLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYA 207
            + T+ + K M   AK  G  G IVN  SS  +W   +                    Y 
Sbjct: 122 LVCTRAVYKHM---AKRGG--GAIVN-QSSTAAWLYSNF-------------------YG 156

Query: 208 LSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTR 247
           L+K+     T++LA+ L  M  N+ VN + PG + T  TR
Sbjct: 157 LAKVGLNGLTQQLARELGGM--NIRVNAIAPGPIDTEATR 194

Length = 250

>gnl|CDD|237189 PRK12748, PRK12748, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 60.1 bits (146), Expect = 2e-10
 Identities = 66/251 (26%), Positives = 91/251 (36%), Gaps = 53/251 (21%)

Query: 37  TAIITGAT--SGIGAETARVLAKRGARLVLPARSLKAAEEA-----------KARLASDC 83
            A++TGA+  +GIGA   R LA +G  +     S                  K  + S  
Sbjct: 7   IALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIES-- 64

Query: 84  PGSDIVVLPLDLSSLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAISEDGIEM---TF 140
            G     + +DLS   +               ++LINNA    H   + E   E     +
Sbjct: 65  YGVRCEHMEIDLSQPYAPNRVFYAVSERLGDPSILINNAAYSTHT-RLEELTAEQLDKHY 123

Query: 141 ATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHY 200
           A N     LL+    K+           GRI+N++S       G M   L          
Sbjct: 124 AVNVRATMLLSSAFAKQY-----DGKAGGRIINLTS---GQSLGPMPDEL---------- 165

Query: 201 DATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFL 260
               AYA +K A    TK LA  L   E  +TVN V+PG   T       G+IT+    L
Sbjct: 166 ----AYAATKGAIEAFTKSLAPEL--AEKGITVNAVNPGPTDT-------GWITEE---L 209

Query: 261 TSKLLKTIPQG 271
              L+   PQG
Sbjct: 210 KHHLVPKFPQG 220

Length = 256

>gnl|CDD|180576 PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 60.2 bits (146), Expect = 2e-10
 Identities = 50/217 (23%), Positives = 84/217 (38%), Gaps = 34/217 (15%)

Query: 33  LSSVTAIITGATSGIGAETARVLAKRGARL-VLPARSLKAAEEAKARLASDCPGSDIVVL 91
                A+ITG T GIG   A    + GA++ VL   +   A+E + +         +  +
Sbjct: 5   FKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKELREK--------GVFTI 56

Query: 92  PLDLSSLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFL 149
             D+ +   V+            +++L+NNAG           E+        N  G   
Sbjct: 57  KCDVGNRDQVKKSKEVVEKEFGRVDVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIY 116

Query: 150 LTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALS 209
            T   L  +  +       G IVN++S+     +G     +G  +        T  YA++
Sbjct: 117 TTYEFLPLLKLSKN-----GAIVNIASN-----AG-----IGTAAEG------TTFYAIT 155

Query: 210 KLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLT 246
           K   ++ T+ LA  L   +  + VN V PG V T +T
Sbjct: 156 KAGIIILTRRLAFEL--GKYGIRVNAVAPGWVETDMT 190

Length = 255

>gnl|CDD|181324 PRK08251, PRK08251, short chain dehydrogenase; Provisional

 Score = 59.9 bits (146), Expect = 2e-10
 Identities = 60/214 (28%), Positives = 92/214 (42%), Gaps = 33/214 (15%)

Query: 39  IITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSL 98
           +ITGA+SG+GA  AR  A +G  L L AR     EE KA L +  PG  + V  LD++  
Sbjct: 6   LITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDH 65

Query: 99  SSVRNFVSQFHSLNLPLNLLINNAG--KFAHQHAISEDGIEMTFATNYLGHFLLTKLLLK 156
             V    ++F      L+ +I NAG  K A          + T  TN++    L +    
Sbjct: 66  DQVFEVFAEFRDELGGLDRVIVNAGIGKGARLGTGKFWANKATAETNFVA--ALAQ---- 119

Query: 157 KMIETA----KATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLA 212
              E A    +  G  G +V +SS      S    R L      K+ Y A++A  ++ L 
Sbjct: 120 --CEAAMEIFREQG-SGHLVLISS-----VSAV--RGL---PGVKAAYAASKA-GVASLG 165

Query: 213 NVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLT 246
             L       R +  +  + V+ + PG +R+ + 
Sbjct: 166 EGL-------RAELAKTPIKVSTIEPGYIRSEMN 192

Length = 248

>gnl|CDD|236040 PRK07523, PRK07523, gluconate 5-dehydrogenase; Provisional

 Score = 59.8 bits (145), Expect = 2e-10
 Identities = 39/148 (26%), Positives = 68/148 (45%), Gaps = 11/148 (7%)

Query: 32  NLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVL 91
           +L+   A++TG++ GIG   A  LA+ GA ++L  R       A   L     G     L
Sbjct: 7   DLTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQ--GLSAHAL 64

Query: 92  PLDLSSLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAISE---DGIEMTFATNYLGHF 148
             D++   +VR  +  F +   P+++L+NNAG    +  + +   D  E    TN    F
Sbjct: 65  AFDVTDHDAVRAAIDAFEAEIGPIDILVNNAG-MQFRTPLEDFPADAFERLLRTNISSVF 123

Query: 149 LLTKLLLKKMIETAKATGIQGRIVNVSS 176
            + + + + MI         G+I+N++S
Sbjct: 124 YVGQAVARHMIARG-----AGKIINIAS 146

Length = 255

>gnl|CDD|131680 TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

 Score = 61.4 bits (149), Expect = 2e-10
 Identities = 55/214 (25%), Positives = 97/214 (45%), Gaps = 28/214 (13%)

Query: 33  LSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVV-L 91
           L+   A +TG   GIG ETAR LA  GA +VL   +L+AAE   A +     G+   V L
Sbjct: 412 LARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEIN-GQFGAGRAVAL 470

Query: 92  PLDLSSLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFL 149
            +D++   +V+   +        +++++NNAG          +    ++       G+FL
Sbjct: 471 KMDVTDEQAVKAAFADVALAYGGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFL 530

Query: 150 LTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALS 209
           + +   ++M    +  G+ G IV + +S ++ ++G          +N S Y A +A A +
Sbjct: 531 VAREAFRQM----REQGLGGNIVFI-ASKNAVYAG----------KNASAYSAAKA-AEA 574

Query: 210 KLANVLHTKELAQRLKQMEANVTVNCVHP-GIVR 242
            LA  L   E           + VN V+P  +++
Sbjct: 575 HLARCL-AAEGG------TYGIRVNTVNPDAVLQ 601

Length = 676

>gnl|CDD|180343 PRK05993, PRK05993, short chain dehydrogenase; Provisional

 Score = 59.7 bits (145), Expect = 3e-10
 Identities = 59/215 (27%), Positives = 91/215 (42%), Gaps = 39/215 (18%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLS 96
           + +ITG +SGIGA  AR L   G R+    R     EE  A L ++     +    LD +
Sbjct: 6   SILITGCSSGIGAYCARALQSDGWRVFATCRK----EEDVAALEAE----GLEAFQLDYA 57

Query: 97  SLSSVRNFVSQFHSL-NLPLNLLINNAGKFAHQHAI---SEDGIEMTFATNYLGHFLLTK 152
              S+   V+Q   L    L+ L NN G +    A+     + +   F  N+ G   LT+
Sbjct: 58  EPESIAALVAQVLELSGGRLDALFNN-GAYGQPGAVEDLPTEALRAQFEANFFGWHDLTR 116

Query: 153 LLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDM-IRYLGQISRNKSHYDATRAYALSKL 211
            ++  M    +  G QGRIV  SS +     G + ++Y G             AY  SK 
Sbjct: 117 RVIPVM----RKQG-QGRIVQCSSIL-----GLVPMKYRG-------------AYNASKF 153

Query: 212 ANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLT 246
           A  +    L  R++   + + V+ + PG + TR  
Sbjct: 154 A--IEGLSLTLRMELQGSGIHVSLIEPGPIETRFR 186

Length = 277

>gnl|CDD|181298 PRK08219, PRK08219, short chain dehydrogenase; Provisional

 Score = 58.8 bits (143), Expect = 3e-10
 Identities = 63/216 (29%), Positives = 96/216 (44%), Gaps = 43/216 (19%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLS 96
           TA+ITGA+ GIGA  AR LA     L+L  R  +  +E  A L    PG+     P+DL+
Sbjct: 5   TALITGASRGIGAAIARELA-PTHTLLLGGRPAERLDELAAEL----PGA--TPFPVDLT 57

Query: 97  SLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAISEDGIEM---TFATNYLGHFLLTKL 153
              ++   V Q       L++L++NAG  A    ++E  ++    T   N +    LT+L
Sbjct: 58  DPEAIAAAVEQLG----RLDVLVHNAG-VADLGPVAESTVDEWRATLEVNVVAPAELTRL 112

Query: 154 LLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLAN 213
           LL  +          G +V ++S      +G            +++     +YA SK A 
Sbjct: 113 LLPALRAA------HGHVVFINSG-----AG-----------LRANPGWG-SYAASKFA- 148

Query: 214 VLHTKELAQRLKQMEA-NVTVNCVHPGIVRTRLTRE 248
               + LA  L++ E  NV V  VHPG   T + R 
Sbjct: 149 ---LRALADALREEEPGNVRVTSVHPGRTDTDMQRG 181

Length = 227

>gnl|CDD|135631 PRK05867, PRK05867, short chain dehydrogenase; Provisional

 Score = 59.3 bits (143), Expect = 3e-10
 Identities = 59/216 (27%), Positives = 93/216 (43%), Gaps = 25/216 (11%)

Query: 32  NLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVL 91
           +L    A+ITGA++GIG   A    + GA++ + AR L A E+    + +   G  +V +
Sbjct: 6   DLHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTS--GGKVVPV 63

Query: 92  PLDLSSLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAISEDGIEMTFA--TNYLGHFL 149
             D+S    V + + Q  +    +++ + NAG       +     E      TN  G FL
Sbjct: 64  CCDVSQHQQVTSMLDQVTAELGGIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFL 123

Query: 150 LTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALS 209
             +   K M++     G  G I+N +S      SG +I    Q+S           Y  S
Sbjct: 124 TAQAAAKAMVK----QGQGGVIINTAS-----MSGHIINVPQQVSH----------YCAS 164

Query: 210 KLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRL 245
           K A +  TK +A  L   +  + VN V PG + T L
Sbjct: 165 KAAVIHLTKAMAVELAPHK--IRVNSVSPGYILTEL 198

Length = 253

>gnl|CDD|187621 cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH), classical (c) SDR

 Score = 59.2 bits (143), Expect = 4e-10
 Identities = 56/217 (25%), Positives = 92/217 (42%), Gaps = 38/217 (17%)

Query: 33  LSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLP 92
           L   TA+ITG+  GIG   A+   + GAR+ +   +L+AA    A +     G     + 
Sbjct: 1   LDGKTALITGSARGIGRAFAQAYVREGARVAIADINLEAARATAAEI-----GPAACAIS 55

Query: 93  LDLSSLSSVRNFVSQFHSLNLPLNLLINNAGKF--AHQHAISEDGIEMTFATNYLGHFLL 150
           LD++  +S+   V+        +++L+NNA  F  A    I+ +  +  FA N  G   +
Sbjct: 56  LDVTDQASIDRCVAALVDRWGSIDILVNNAALFDLAPIVDITRESYDRLFAINVSGTLFM 115

Query: 151 TKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNK----SHYDATRAY 206
            + + + MI    A G  G+I+N++S               Q  R        Y AT+A 
Sbjct: 116 MQAVARAMI----AQGRGGKIINMAS---------------QAGRRGEALVGVYCATKAA 156

Query: 207 ALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRT 243
            +S       T+     L +   N  VN + PG+V  
Sbjct: 157 VIS------LTQSAGLNLIRHGIN--VNAIAPGVVDG 185

This bacterial subgroup includes Rhodobacter sphaeroides SDH, and other SDHs. SDH preferentially interconverts D-sorbitol (D-glucitol) and D-fructose, but also interconverts L-iditol/L-sorbose and galactitol/D-tagatose. SDH is NAD-dependent and is a dimeric member of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 254

>gnl|CDD|235633 PRK05872, PRK05872, short chain dehydrogenase; Provisional

 Score = 59.2 bits (144), Expect = 5e-10
 Identities = 55/224 (24%), Positives = 90/224 (40%), Gaps = 38/224 (16%)

Query: 31  PNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVV 90
            +L+    ++TGA  GIGAE AR L  RGA+L L            A L  D     +V 
Sbjct: 5   TSLAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGGDDRVLTVVA 64

Query: 91  LPLDLSSL-SSVRNFVSQFHSLNLPLNLLINNAG-----KFAHQHAISEDGIEMTFATNY 144
              DL+++ ++    V +F      +++++ NAG       A    +  D        N 
Sbjct: 65  DVTDLAAMQAAAEEAVERFG----GIDVVVANAGIASGGSVAQ---VDPDAFRRVIDVNL 117

Query: 145 LGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATR 204
           LG F   +  L  +IE        G ++ V SS+ ++ +   +          + Y A++
Sbjct: 118 LGVFHTVRATLPALIERR------GYVLQV-SSLAAFAAAPGM----------AAYCASK 160

Query: 205 AYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRE 248
           A  +   AN L   E+A         VTV   +   + T L R+
Sbjct: 161 A-GVEAFANALRL-EVAHH------GVTVGSAYLSWIDTDLVRD 196

Length = 296

>gnl|CDD|181044 PRK07577, PRK07577, short chain dehydrogenase; Provisional

 Score = 58.6 bits (142), Expect = 5e-10
 Identities = 59/244 (24%), Positives = 100/244 (40%), Gaps = 55/244 (22%)

Query: 33  LSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLP 92
           +SS T ++TGAT GIG   +  LA  G +++  ARS             D PG    +  
Sbjct: 1   MSSRTVLVTGATKGIGLALSLRLANLGHQVIGIARS----------AIDDFPGE---LFA 47

Query: 93  LDLSSL----SSVRNFVSQFHSLNLPLNLLINNAG--KFAHQHAISEDGIEMTFATNYLG 146
            DL+ +    +++            P++ ++NN G         I    ++  +  N   
Sbjct: 48  CDLADIEQTAATLAQINEIH-----PVDAIVNNVGIALPQPLGKIDLAALQDVYDLNVRA 102

Query: 147 HFLLTKLLLKKMIETAKATGIQGRIVNVSS-SIHSWFSGDMIRYLGQISRNKSHYDATRA 205
              +T+  L+ M    K    QGRIVN+ S +I               + +++      +
Sbjct: 103 AVQVTQAFLEGM----KLRE-QGRIVNICSRAIFG-------------ALDRT------S 138

Query: 206 YALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSKLL 265
           Y+ +K A V  T+  A  L   E  +TVN V PG + T L R+     ++       ++L
Sbjct: 139 YSAAKSALVGCTRTWALELA--EYGITVNAVAPGPIETELFRQTRPVGSE----EEKRVL 192

Query: 266 KTIP 269
            +IP
Sbjct: 193 ASIP 196

Length = 234

>gnl|CDD|187607 cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP]reductase (BKR), subgroup 2, classical (c) SDR

 Score = 58.6 bits (142), Expect = 5e-10
 Identities = 48/215 (22%), Positives = 86/215 (40%), Gaps = 36/215 (16%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLS 96
             ++TGA+ G+GA  AR  A+ GAR+V+       + EA A  A    G   + +  D+ 
Sbjct: 2   VVLVTGASRGLGAAIARSFAREGARVVVNYYRSTESAEAVAAEA----GERAIAIQADVR 57

Query: 97  SLSSVRNFVSQFHSLNLPLNLLINNA---GKFAHQHAISEDGIEM-TFATNY----LGHF 148
               V+  + +  +   P++ ++NNA     F      + D I+   +         G  
Sbjct: 58  DRDQVQAMIEEAKNHFGPVDTIVNNALIDFPFDPDQRKTFDTIDWEDYQQQLEGAVKGAL 117

Query: 149 LLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYAL 208
            L + +L    E        GR++N+ +++   F   ++ Y          Y   +A  L
Sbjct: 118 NLLQAVLPDFKERG-----SGRVINIGTNL---FQNPVVPY--------HDYTTAKAALL 161

Query: 209 SKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRT 243
               N+   KEL          +TVN V  G+++ 
Sbjct: 162 GFTRNM--AKELGPY------GITVNMVSGGLLKV 188

This subgroup includes Rhizobium sp. NGR234 FabG1. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246

>gnl|CDD|236145 PRK08063, PRK08063, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 58.6 bits (142), Expect = 7e-10
 Identities = 54/209 (25%), Positives = 89/209 (42%), Gaps = 29/209 (13%)

Query: 38  AIITGATSGIGAETARVLAKRGARLVLP-ARSLKAAEEAKARLASDCPGSDIVVLPLDLS 96
           A++TG++ GIG   A  LA+ G  + +  ARS KAAEE    + +   G   + +  ++ 
Sbjct: 7   ALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEA--LGRKALAVKANVG 64

Query: 97  SLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHA--ISEDGIEMTFATNYLGHFLLTKLL 154
            +  ++   +Q       L++ +NNA     + A  + E   + T   N        +  
Sbjct: 65  DVEKIKEMFAQIDEEFGRLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEA 124

Query: 155 LKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLANV 214
            K M +        G+I+++ SS+ S      IRYL     N +    ++A AL  L   
Sbjct: 125 AKLMEKVGG-----GKIISL-SSLGS------IRYL----ENYTTVGVSKA-ALEALTRY 167

Query: 215 LHTKELAQRLKQMEANVTVNCVHPGIVRT 243
           L   ELA +       + VN V  G V T
Sbjct: 168 LAV-ELAPK------GIAVNAVSGGAVDT 189

Length = 250

>gnl|CDD|187615 cd05357, PR_SDR_c, pteridine reductase (PR), classical (c) SDRs

 Score = 58.1 bits (141), Expect = 7e-10
 Identities = 51/206 (24%), Positives = 82/206 (39%), Gaps = 30/206 (14%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPAR-SLKAAEEAKARLASDCPGSDIVVLPLDL 95
            A++TGA   IG   A  LA  G R+V+    S   A+  K  L +    +  V++  DL
Sbjct: 2   VALVTGAAKRIGRAIAEALAAEGYRVVVHYNRSEAEAQRLKDELNAL--RNSAVLVQADL 59

Query: 96  SSLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQH--AISEDGIEMTFATNYLGHFLLTKL 153
           S  ++  + V+         ++L+NNA  F        SED     F  N    +LL + 
Sbjct: 60  SDFAACADLVAAAFRAFGRCDVLVNNASAFYPTPLGQGSEDAWAELFGINLKAPYLLIQA 119

Query: 154 LLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLAN 213
             +++  +       G I+N+  ++                R  + Y    AY +SK A 
Sbjct: 120 FARRLAGSRN-----GSIINIIDAM--------------TDRPLTGY---FAYCMSKAAL 157

Query: 214 VLHTKELAQRLKQMEANVTVNCVHPG 239
              T+  A  L     N+ VN + PG
Sbjct: 158 EGLTRSAALELA---PNIRVNGIAPG 180

Pteridine reductases (PRs), members of the SDR family, catalyzes the NAD-dependent reduction of folic acid, dihydrofolate and related compounds. In Leishmania, pteridine reductase (PTR1) acts to circumvent the anti-protozoan drugs that attack dihydrofolate reductase activity. Proteins in this subgroup have an N-terminal NAD-binding motif and a YxxxK active site motif, but have an Asp instead of the usual upstream catalytic Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 234

>gnl|CDD|171821 PRK12937, PRK12937, short chain dehydrogenase; Provisional

 Score = 58.2 bits (141), Expect = 8e-10
 Identities = 60/219 (27%), Positives = 91/219 (41%), Gaps = 33/219 (15%)

Query: 31  PNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVV 90
             LS+  AI+TGA+ GIGA  AR LA  G  + +      AA +          G  I V
Sbjct: 1   MTLSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAV 60

Query: 91  LPLDLSSLSSVRNFVSQFHSLNLPLNLLINNAGKF--AHQHAISEDGIEMTFATNYLGHF 148
              D++  ++V        +    +++L+NNAG            +  + T ATN  G F
Sbjct: 61  -QADVADAAAVTRLFDAAETAFGRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAF 119

Query: 149 LLTKLLLKKMIETAKATGIQGRIVNVSSSI--HSWFSGDMIRYLGQISRNKSHYDATRAY 206
           ++ +   + +       G  GRI+N+S+S+                       Y A++A 
Sbjct: 120 VVLREAARHL-------GQGGRIINLSTSVIALPLPGY-------------GPYAASKA- 158

Query: 207 ALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRL 245
           A+  L +VL   EL  R       +TVN V PG V T L
Sbjct: 159 AVEGLVHVL-ANELRGR------GITVNAVAPGPVATEL 190

Length = 245

>gnl|CDD|180761 PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

 Score = 57.8 bits (140), Expect = 1e-09
 Identities = 50/217 (23%), Positives = 86/217 (39%), Gaps = 29/217 (13%)

Query: 32  NLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVL 91
           +L    AI+TG  +G+G   A  LAK GA +++   +     +   RL     G  +  +
Sbjct: 12  SLDGKVAIVTGGNTGLGQGYAVALAKAGADIIIT--THGTNWDETRRLIEKE-GRKVTFV 68

Query: 92  PLDLSSLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAI--SEDGIEMTFATNYLGHFL 149
            +DL+   S    V +       +++L+NNAG       +   ++        N    + 
Sbjct: 69  QVDLTKPESAEKVVKEALEEFGKIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYH 128

Query: 150 LTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALS 209
           L++ + K M +        G+I+N++S         M+ + G             AY  S
Sbjct: 129 LSQAVAKVMAKQG-----SGKIINIAS---------MLSFQGGK--------FVPAYTAS 166

Query: 210 KLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLT 246
           K      TK  A  L     N+ VN + PG ++T  T
Sbjct: 167 KHGVAGLTKAFANELA--AYNIQVNAIAPGYIKTANT 201

Length = 258

>gnl|CDD|180446 PRK06180, PRK06180, short chain dehydrogenase; Provisional

 Score = 58.0 bits (141), Expect = 1e-09
 Identities = 61/215 (28%), Positives = 94/215 (43%), Gaps = 33/215 (15%)

Query: 32  NLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVL 91
             S  T +ITG +SG G   A+     G R+V   RS    E A+A   +  P    +  
Sbjct: 1   MSSMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRS----EAARADFEALHPD-RALAR 55

Query: 92  PLDLSSLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAISE-DGIEM--TFATNYLGHF 148
            LD++   ++   V+   +   P+++L+NNAG + H+ AI E    EM   F  N  G  
Sbjct: 56  LLDVTDFDAIDAVVADAEATFGPIDVLVNNAG-YGHEGAIEESPLAEMRRQFEVNVFGAV 114

Query: 149 LLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYAL 208
            +TK +L  M         +G IVN++S       G +I   G       +Y  ++ +AL
Sbjct: 115 AMTKAVLPGMRARR-----RGHIVNITS------MGGLITMPGI-----GYYCGSK-FAL 157

Query: 209 SKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRT 243
             ++  L  KE+A         + V  V PG  RT
Sbjct: 158 EGISESL-AKEVAP------FGIHVTAVEPGSFRT 185

Length = 277

>gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated

 Score = 58.3 bits (141), Expect = 2e-09
 Identities = 57/239 (23%), Positives = 86/239 (35%), Gaps = 40/239 (16%)

Query: 10  GSAGASGYGSKSTAEQVTDGCPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSL 69
           G     G G  STA+  +      S     ITG   GIG   A   A  G RL++  R  
Sbjct: 246 GWTVYGGSGPASTAQAPSPLAE--SPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDA 303

Query: 70  KAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQH 129
           + A++    L  +        +  D++  ++V +  +Q  +    L++L+NNAG  A   
Sbjct: 304 EGAKKLAEALGDEHL-----SVQADITDEAAVESAFAQIQARWGRLDVLVNNAG-IAEVF 357

Query: 130 AISED----GIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSI-HSWFSG 184
             S +         +  N  G F   +         A+     G IVN+ S         
Sbjct: 358 KPSLEQSAEDFTRVYDVNLSGAFACAR-------AAARLMSQGGVIVNLGSIASLLALPP 410

Query: 185 DMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRT 243
                     RN        AY  SK A  + ++ LA       A + VN V PG + T
Sbjct: 411 ----------RN--------AYCASKAAVTMLSRSLACEWA--PAGIRVNTVAPGYIET 449

Length = 520

>gnl|CDD|181188 PRK07985, PRK07985, oxidoreductase; Provisional

 Score = 57.7 bits (139), Expect = 2e-09
 Identities = 67/234 (28%), Positives = 102/234 (43%), Gaps = 47/234 (20%)

Query: 24  EQVTDGCPNLSSVTAIITGATSGIGAETARVLAKRGARLV---LPARSLKAAEEAKARLA 80
           E+   G   L    A++TG  SGIG   A   A+ GA +    LP    + A++ K  + 
Sbjct: 38  EKTYVGSGRLKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEE-EDAQDVKK-II 95

Query: 81  SDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAI------SED 134
            +C G   V+LP DLS     R+ V + H     L+++   AGK   Q AI      + +
Sbjct: 96  EEC-GRKAVLLPGDLSDEKFARSLVHEAHKALGGLDIMALVAGK---QVAIPDIADLTSE 151

Query: 135 GIEMTFATNYLGHFLLTKL---LLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLG 191
             + TFA N    F LT+    LL K           G  +  +SSI ++          
Sbjct: 152 QFQKTFAINVFALFWLTQEAIPLLPK-----------GASIITTSSIQAY---------- 190

Query: 192 QISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRL 245
           Q S +   Y AT+A  L+      +++ LA+++   E  + VN V PG + T L
Sbjct: 191 QPSPHLLDYAATKAAILN------YSRGLAKQVA--EKGIRVNIVAPGPIWTAL 236

Length = 294

>gnl|CDD|180802 PRK07035, PRK07035, short chain dehydrogenase; Provisional

 Score = 57.3 bits (139), Expect = 2e-09
 Identities = 51/216 (23%), Positives = 91/216 (42%), Gaps = 29/216 (13%)

Query: 32  NLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVL 91
           +L+   A++TGA+ GIG   A++LA++GA +++ +R L   +     + +   G     L
Sbjct: 5   DLTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAA--GGKAEAL 62

Query: 92  PLDLSSLSSVRNFVSQFHSLNLPLNLLINNAGK---FAHQHAISEDGIEMTFATNYLGHF 148
              +  +  +    +     +  L++L+NNA     F H         + T   N  G+F
Sbjct: 63  ACHIGEMEQIDALFAHIRERHGRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYF 122

Query: 149 LLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYAL 208
            ++    K M    K  G  G IVNV +S++    GD                    Y++
Sbjct: 123 FMSVEAGKLM----KEQG-GGSIVNV-ASVNGVSPGDF----------------QGIYSI 160

Query: 209 SKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTR 244
           +K A +  TK  A+        + VN + PG+  T+
Sbjct: 161 TKAAVISMTKAFAKECAPF--GIRVNALLPGLTDTK 194

Length = 252

>gnl|CDD|180408 PRK06114, PRK06114, short chain dehydrogenase; Provisional

 Score = 57.1 bits (138), Expect = 2e-09
 Identities = 58/217 (26%), Positives = 94/217 (43%), Gaps = 31/217 (14%)

Query: 32  NLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVL 91
           +L    A +TGA SGIG   A  LA+ GA + L            A          I  +
Sbjct: 5   DLDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAI-QI 63

Query: 92  PLDLSSLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHA---ISEDGIEMTFATNYLGHF 148
             D++S + +R  V++  +    L L +N AG  A+ +    + E+  +     N  G F
Sbjct: 64  AADVTSKADLRAAVARTEAELGALTLAVNAAG-IANANPAEEMEEEQWQTVMDINLTGVF 122

Query: 149 LLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMI-RYLGQISRNKSHYDATRAYA 207
           L  +   + M+E        G IVN++S      SG ++ R L Q     +HY+A++   
Sbjct: 123 LSCQAEARAMLENGG-----GSIVNIAS-----MSGIIVNRGLLQ-----AHYNASK--- 164

Query: 208 LSKLANVLH-TKELAQRLKQMEANVTVNCVHPGIVRT 243
               A V+H +K LA  ++ +   + VN + PG   T
Sbjct: 165 ----AGVIHLSKSLA--MEWVGRGIRVNSISPGYTAT 195

Length = 254

>gnl|CDD|187633 cd08928, KR_fFAS_like_SDR_c_like, ketoacyl reductase (KR) domain of fungal-type fatty acid synthase (fFAS)-like, classical (c)-like SDRs

 Score = 56.5 bits (136), Expect = 2e-09
 Identities = 51/221 (23%), Positives = 82/221 (37%), Gaps = 37/221 (16%)

Query: 38  AIITGATSG-IGAETARVLAKRGARLVLPARS-----LKAAEEAKARLASDCP--GSDIV 89
            +ITGA  G IGAE  + L   GA++ +          K  ++  A     C   GS ++
Sbjct: 1   VLITGAGDGSIGAEVLQGLLNGGAKVYVTTSRFSRQVTKYYQDIYAA----CGAAGSVLI 56

Query: 90  VLPLDLSSLSSVR-NFVSQFHSLNLPLNLLINNAGKFAHQHAISEDGIEM--TFATNYLG 146
           V+P +  S   V    +  + ++N     L +  G FA   AI E GIE+    + + + 
Sbjct: 57  VVPFNQGSKQDVEALAIGIYDTVNGLGWDL-DLYGPFA---AIPETGIEIPAIDSKSEVA 112

Query: 147 HFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSW--FSGDMIRYLGQISRNKSHYDATR 204
           H ++   LL+              +V +   +         +I      S N   +    
Sbjct: 113 HRIMLTNLLRPK-----------GLVKIQKQLRGQETRPAQVILPF---SPNHGTFGDDG 158

Query: 205 AYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRL 245
           AY+ SKL         A      +  +TV   H G  R  L
Sbjct: 159 AYSESKLHLETLFNRWASESWGND--LTVCGAHIGWTRGTL 197

KR domain of FAS, including the fungal-type multidomain FAS alpha chain, and the single domain daunorubicin C-13 ketoreductase. Fungal-type FAS is a heterododecameric FAS composed of alpha and beta multifunctional polypeptide chains. The KR, an SDR family member is located centrally in the alpha chain. KR catalyzes the NADP-dependent reduction of ketoacyl-ACP to hydroxyacyl-ACP. KR shares the critical active site Tyr of the classical SDR and has partial identity of the active site tetrad, but the upstream Asn is replaced in KR by Met. As in other SDRs, there is a glycine rich NAD(P)-binding motif, but the pattern found in KR does not match the classical SDRs, and is not strictly conserved within this group. Daunorubicin is a clinically important therapeutic compound used in some cancer treatments. Single domain daunorubicin C-13 ketoreductase is member of the classical SDR family with a canonical glycine-rich NAD(P)-binding motif, but lacking a complete match to the active site tetrad characteristic of this group. The critical Tyr, plus the Lys and upstream Asn are present, but the catalytic Ser is replaced, generally by Gln. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|236357 PRK08945, PRK08945, putative oxoacyl-(acyl carrier protein) reductase; Provisional

 Score = 56.4 bits (137), Expect = 3e-09
 Identities = 57/221 (25%), Positives = 91/221 (41%), Gaps = 50/221 (22%)

Query: 40  ITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLS 99
           +TGA  GIG E A   A+ GA ++L  R+ +  E     + +   G    ++PLDL + +
Sbjct: 17  VTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAG-GPQPAIIPLDLLTAT 75

Query: 100 SVRNFV-------SQF-HSLNLPLNLLINNAG------KFAHQHAISEDGIEMTFATNYL 145
             +N+         QF       L+ +++NAG          Q       +      N  
Sbjct: 76  P-QNYQQLADTIEEQFGR-----LDGVLHNAGLLGELGPMEQQDPEVWQDV---MQVNVN 126

Query: 146 GHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIR-YLGQISRNKSHYDATR 204
             F+LT+ LL  ++++  A      +V  SSS+     G   R   G             
Sbjct: 127 ATFMLTQALLPLLLKSPAA-----SLVFTSSSV-----GRQGRANWG------------- 163

Query: 205 AYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRL 245
           AYA+SK A     + LA   +    N+ VNC++PG  RT +
Sbjct: 164 AYAVSKFATEGMMQVLADEYQG--TNLRVNCINPGGTRTAM 202

Length = 247

>gnl|CDD|214833 smart00822, PKS_KR, This enzymatic domain is part of bacterial polyketide synthases

 Score = 55.2 bits (134), Expect = 3e-09
 Identities = 32/89 (35%), Positives = 50/89 (56%), Gaps = 2/89 (2%)

Query: 37  TAIITGATSGIGAETARVLAKRGAR-LVLPARSLKAAEEAKARLAS-DCPGSDIVVLPLD 94
           T +ITG   G+G   AR LA+RGAR LVL +RS   A  A A LA  +  G+ + V+  D
Sbjct: 2   TYLITGGLGGLGRALARWLAERGARRLVLLSRSGPDAPGAAALLAELEAAGARVTVVACD 61

Query: 95  LSSLSSVRNFVSQFHSLNLPLNLLINNAG 123
           ++   ++   ++   ++  PL  +I+ AG
Sbjct: 62  VADRDALAAVLAAIPAVEGPLTGVIHAAG 90

It catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. Length = 180

>gnl|CDD|235702 PRK06124, PRK06124, gluconate 5-dehydrogenase; Provisional

 Score = 56.3 bits (136), Expect = 3e-09
 Identities = 38/149 (25%), Positives = 69/149 (46%), Gaps = 15/149 (10%)

Query: 33  LSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLP 92
           L+   A++TG+  G+G E AR LA  GA +++  R+    E A A L +   G     L 
Sbjct: 9   LAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAA--GGAAEALA 66

Query: 93  LDLSSLSSVRNFVSQFHSLNLPLNLLINNAGK-----FAHQHAISEDGIEMTFATNYLGH 147
            D++   +V    ++  + +  L++L+NN G       A    + +  I     T+ +  
Sbjct: 67  FDIADEEAVAAAFARIDAEHGRLDILVNNVGARDRRPLAE---LDDAAIRALLETDLVAP 123

Query: 148 FLLTKLLLKKMIETAKATGIQGRIVNVSS 176
            LL++L  ++M          GRI+ ++S
Sbjct: 124 ILLSRLAAQRM-----KRQGYGRIIAITS 147

Length = 256

>gnl|CDD|187662 cd09761, A3DFK9-like_SDR_c, Clostridium thermocellum A3DFK9-like, a putative carbohydrate or polyalcohol metabolizing SDR, classical (c) SDRs

 Score = 56.0 bits (135), Expect = 3e-09
 Identities = 49/215 (22%), Positives = 88/215 (40%), Gaps = 33/215 (15%)

Query: 38  AIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSS 97
           AI+TG   GIG +      + G ++V         EE  A  A +  G ++  +  D++ 
Sbjct: 4   AIVTGGGHGIGKQICLDFLEAGDKVVF----ADIDEERGADFA-EAEGPNLFFVHGDVAD 58

Query: 98  LSSVRNFVSQFHSLNLPLNLLINNA--GKFAHQHAISEDGIEMTFATNYLGHFLLTKLLL 155
            + V+  V         +++L+NNA  G      ++  +  +   + N  G + L++   
Sbjct: 59  ETLVKFVVYAMLEKLGRIDVLVNNAARGSKGILSSLLLEEWDRILSVNLTGPYELSRYCR 118

Query: 156 KKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLANVL 215
            ++I+       +GRI+N++S                 +R       + AYA SK   V 
Sbjct: 119 DELIKN------KGRIINIAS-----------------TRAFQSEPDSEAYAASKGGLVA 155

Query: 216 HTKELAQRLKQMEANVTVNCVHPGIVRTRLTRERE 250
            T  LA  L     ++ VNC+ PG + T   +E  
Sbjct: 156 LTHALAMSLGP---DIRVNCISPGWINTTEQQEFT 187

This subgroup includes a putative carbohydrate or polyalcohol metabolizing SDR (A3DFK9) from Clostridium thermocellum. Its members have a TGXXXGXG classical-SDR glycine-rich NAD-binding motif, and some have a canonical SDR active site tetrad (A3DFK9 lacks the upstream Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 242

>gnl|CDD|180822 PRK07069, PRK07069, short chain dehydrogenase; Validated

 Score = 56.3 bits (136), Expect = 4e-09
 Identities = 52/209 (24%), Positives = 79/209 (37%), Gaps = 25/209 (11%)

Query: 38  AIITGATSGIGAETARVLAKRGARLVLP-ARSLKAAEEAKARLASDCPGSDIVVLPLDLS 96
           A ITGA  G+G   AR +A++GA++ L         +   A + +            D++
Sbjct: 2   AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVT 61

Query: 97  SLSSVRNFVSQFHSLNLPLNLLINNAG--KFAHQHAISEDGIEMTFATNYLGHFLLTKLL 154
             +  +  ++Q       L++L+NNAG   F     I  D      A N    FL  K  
Sbjct: 62  DEAQWQALLAQAADAMGGLSVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHA 121

Query: 155 LKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLANV 214
           L  +  +  A+     IVN+SS        D                   AY  SK A  
Sbjct: 122 LPYLRASQPAS-----IVNISSVAAFKAEPDYT-----------------AYNASKAAVA 159

Query: 215 LHTKELAQRLKQMEANVTVNCVHPGIVRT 243
             TK +A    +   +V  N +HP  +RT
Sbjct: 160 SLTKSIALDCARRGLDVRCNSIHPTFIRT 188

Length = 251

>gnl|CDD|180818 PRK07062, PRK07062, short chain dehydrogenase; Provisional

 Score = 56.2 bits (136), Expect = 4e-09
 Identities = 27/92 (29%), Positives = 48/92 (52%)

Query: 33  LSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLP 92
           L    A++TG +SGIG  T  +L + GA + +  R  +    A+ARL    PG+ ++   
Sbjct: 6   LEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAAR 65

Query: 93  LDLSSLSSVRNFVSQFHSLNLPLNLLINNAGK 124
            D+   + V  F +   +    +++L+NNAG+
Sbjct: 66  CDVLDEADVAAFAAAVEARFGGVDMLVNNAGQ 97

Length = 265

>gnl|CDD|187623 cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroid dehydrogenase (7 alpha-HSDH), classical (c) SDRs

 Score = 55.7 bits (134), Expect = 5e-09
 Identities = 62/213 (29%), Positives = 88/213 (41%), Gaps = 37/213 (17%)

Query: 38  AIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSS 97
           AI+TG  +GIG   A  LAK GA +V+     + AE   A +     G   + L  +++S
Sbjct: 2   AIVTGGAAGIGKAIAGTLAKAGASVVIADLKSEGAEAVAAAIQQA--GGQAIGLECNVTS 59

Query: 98  LSS----VRNFVSQFHSLNLPLNLLINNA---GKFAHQHAISEDGIEMTFATNYLGHFLL 150
                  V+  VSQF      + +L+NNA   G       ++E+  E  F  N    F L
Sbjct: 60  EQDLEAVVKATVSQFGG----ITILVNNAGGGGPKPFDMPMTEEDFEWAFKLNLFSAFRL 115

Query: 151 TKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSK 210
           ++L    M +          I+N+SS      S          S NK+      AY  SK
Sbjct: 116 SQLCAPHMQKAGGGA-----ILNISS-----MS----------SENKN-VRIA-AYGSSK 153

Query: 211 LANVLHTKELAQRLKQMEANVTVNCVHPGIVRT 243
            A    T+ LA  L      + VN V PG V+T
Sbjct: 154 AAVNHMTRNLAFDLGPK--GIRVNAVAPGAVKT 184

This bacterial subgroup contains 7 alpha-HSDHs, including Escherichia coli 7 alpha-HSDH. 7 alpha-HSDH, a member of the SDR family, catalyzes the NAD+ -dependent dehydrogenation of a hydroxyl group at position 7 of the steroid skeleton of bile acids. In humans the two primary bile acids are cholic and chenodeoxycholic acids, these are formed from cholesterol in the liver. Escherichia coli 7 alpha-HSDH dehydroxylates these bile acids in the human intestine. Mammalian 7 alpha-HSDH activity has been found in livers. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242

>gnl|CDD|181131 PRK07814, PRK07814, short chain dehydrogenase; Provisional

 Score = 55.6 bits (134), Expect = 6e-09
 Identities = 49/208 (23%), Positives = 84/208 (40%), Gaps = 28/208 (13%)

Query: 38  AIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSS 97
           A++TGA  G+GA  A   A+ GA +++ AR+    +E   ++ +   G    V+  DL+ 
Sbjct: 13  AVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRA--AGRRAHVVAADLAH 70

Query: 98  LSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAI--SEDGIEMTFATNYLGHFLLTKLLL 155
             +      Q       L++++NN G       +  S   +   F  N      LT   +
Sbjct: 71  PEATAGLAGQAVEAFGRLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAV 130

Query: 156 KKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLANVL 215
             M+E +      G ++N+SS+        M R  G+            AY  +K A   
Sbjct: 131 PLMLEHSG----GGSVINISST--------MGRLAGR---------GFAAYGTAKAALAH 169

Query: 216 HTKELAQRLKQMEANVTVNCVHPGIVRT 243
           +T+  A  L      + VN + PG + T
Sbjct: 170 YTRLAALDLC---PRIRVNAIAPGSILT 194

Length = 263

>gnl|CDD|187666 cd09806, type1_17beta-HSD-like_SDR_c, human estrogenic 17beta-hydroxysteroid dehydrogenase type 1 (type 1 17beta-HSD)-like, classical (c) SDRs

 Score = 55.5 bits (134), Expect = 6e-09
 Identities = 41/147 (27%), Positives = 63/147 (42%), Gaps = 14/147 (9%)

Query: 37  TAIITGATSGIGAETARVLA---KRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPL 93
             +ITG +SGIG   A  LA    +  ++    R LK          +   G+ +  L L
Sbjct: 2   VVLITGCSSGIGLHLAVRLASDPSKRFKVYATMRDLKKKGRLWEAAGALAGGT-LETLQL 60

Query: 94  DLSSLSSVRNFVSQFHSLNLPLNLLINNAGK--FAHQHAISEDGIEMTFATNYLGHFLLT 151
           D+    SV   V +    +  +++L+ NAG        A+SED +   F  N  G   + 
Sbjct: 61  DVCDSKSVAAAVERVTERH--VDVLVCNAGVGLLGPLEALSEDAMASVFDVNVFGTVRML 118

Query: 152 KLLLKKMIETAKATGIQGRIVNVSSSI 178
           +  L  M    K  G  GRI+ V+SS+
Sbjct: 119 QAFLPDM----KRRG-SGRIL-VTSSV 139

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. This classical SDR subgroup includes human type 1 17beta-HSD, human retinol dehydrogenase 8, zebrafish photoreceptor associated retinol dehydrogenase type 2, and a chicken ovary-specific 17beta-hydroxysteroid dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258

>gnl|CDD|236210 PRK08267, PRK08267, short chain dehydrogenase; Provisional

 Score = 55.3 bits (134), Expect = 8e-09
 Identities = 36/153 (23%), Positives = 60/153 (39%), Gaps = 17/153 (11%)

Query: 40  ITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLS 99
           ITGA SGIG  TA + A  G R+          E   A LA++    +     LD++  +
Sbjct: 6   ITGAASGIGRATALLFAAEGWRVGA----YDINEAGLAALAAELGAGNAWTGALDVTDRA 61

Query: 100 SVRNFVSQFHSLNL-PLNLLINNAG--KFAHQHAISEDGIEMTFATNYLG--------HF 148
           +    ++ F +     L++L NNAG  +      I  +  +     N  G          
Sbjct: 62  AWDAALADFAAATGGRLDVLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALP 121

Query: 149 LLTKLLLKKMIETAKATGI--QGRIVNVSSSIH 179
            L      ++I T+ A+ I  Q  +   S++  
Sbjct: 122 YLKATPGARVINTSSASAIYGQPGLAVYSATKF 154

Length = 260

>gnl|CDD|183489 PRK12384, PRK12384, sorbitol-6-phosphate dehydrogenase; Provisional

 Score = 55.4 bits (134), Expect = 8e-09
 Identities = 47/206 (22%), Positives = 84/206 (40%), Gaps = 27/206 (13%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLS 96
            A++ G    +GA     LA+ G R+ +   + + A      + ++           D +
Sbjct: 4   VAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADAT 63

Query: 97  SLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAISEDGIE---MTFATNYLGHFLLTKL 153
           S  SV         +   ++LL+ NAG  A    I++  +     +   N +G+FL  + 
Sbjct: 64  SEQSVLALSRGVDEIFGRVDLLVYNAG-IAKAAFITDFQLGDFDRSLQVNLVGYFLCARE 122

Query: 154 LLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLAN 213
             + MI      GIQGRI+ ++S      SG          +  S +++   Y+ +K   
Sbjct: 123 FSRLMIR----DGIQGRIIQINSK-----SG----------KVGSKHNS--GYSAAKFGG 161

Query: 214 VLHTKELAQRLKQMEANVTVNCVHPG 239
           V  T+ LA  L   E  +TV+ +  G
Sbjct: 162 VGLTQSLA--LDLAEYGITVHSLMLG 185

Length = 259

>gnl|CDD|187582 cd05274, KR_FAS_SDR_x, ketoreductase (KR) and fatty acid synthase (FAS), complex (x) SDRs

 Score = 55.9 bits (135), Expect = 1e-08
 Identities = 28/102 (27%), Positives = 46/102 (45%), Gaps = 4/102 (3%)

Query: 23  AEQVTDGCPNLSSVTAIITGATSGIGAETARVLAKRGAR-LVLPARSLKAAEEAKARLAS 81
            E          +   +ITG   G+G   AR LA RGAR LVL +R   A   A      
Sbjct: 140 LELAAAPGGLDGTY--LITGGLGGLGLLVARWLAARGARHLVLLSRRGPAPRAAARAALL 197

Query: 82  DCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLPLNLLINNAG 123
              G+ + V+  D++  +++   +++  +   PL  +I+ AG
Sbjct: 198 RAGGARVSVVRCDVTDPAALAALLAE-LAAGGPLAGVIHAAG 238

Ketoreductase, a module of the multidomain polyketide synthase (PKS), has 2 subdomains, each corresponding to a SDR family monomer. The C-terminal subdomain catalyzes the NADPH-dependent reduction of the beta-carbonyl of a polyketide to a hydroxyl group, a step in the biosynthesis of polyketides, such as erythromycin. The N-terminal subdomain, an interdomain linker, is a truncated Rossmann fold which acts to stabilizes the catalytic subdomain. Unlike typical SDRs, the isolated domain does not oligomerize but is composed of 2 subdomains, each resembling an SDR monomer. The active site resembles that of typical SDRs, except that the usual positions of the catalytic Asn and Tyr are swapped, so that the canonical YXXXK motif changes to YXXXN. Modular PKSs are multifunctional structures in which the makeup recapitulates that found in (and may have evolved from) FAS. In some instances, such as porcine FAS, an enoyl reductase (ER) module is inserted between the sub-domains. Fatty acid synthesis occurs via the stepwise elongation of a chain (which is attached to acyl carrier protein, ACP) with 2-carbon units. Eukaryotic systems consist of large, multifunctional synthases (type I) while bacterial, type II systems, use single function proteins. Fungal fatty acid synthase uses a dodecamer of 6 alpha and 6 beta subunits. In mammalian type FAS cycles, ketoacyl synthase forms acetoacetyl-ACP which is reduced by the NADP-dependent beta-KR, forming beta-hydroxyacyl-ACP, which is in turn dehydrated by dehydratase to a beta-enoyl intermediate, which is reduced by NADP-dependent beta-ER. Polyketide synthesis also proceeds via the addition of 2-carbon units as in fatty acid synthesis. The complex SDR NADP-binding motif, GGXGXXG, is often present, but is not strictly conserved in each instance of the module. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 375

>gnl|CDD|187641 cd08936, CR_SDR_c, Porcine peroxisomal carbonyl reductase like, classical (c) SDR

 Score = 54.5 bits (131), Expect = 1e-08
 Identities = 58/220 (26%), Positives = 98/220 (44%), Gaps = 31/220 (14%)

Query: 32  NLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVL 91
            L++  A++T +T GIG   AR LA+ GA +V+ +R  +  + A A L  +  G  +   
Sbjct: 7   PLANKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQQNVDRAVATLQGE--GLSVTGT 64

Query: 92  PLDLSSLSSVRNFVSQFHSLNLPLNLLINNAGK---FAHQHAISEDGIEMTFATNYLGHF 148
              +         V+   +L+  +++L++NA     F +    +E+  +     N     
Sbjct: 65  VCHVGKAEDRERLVATAVNLHGGVDILVSNAAVNPFFGNILDSTEEVWDKILDVNVKATA 124

Query: 149 LLTKLLLKKMIETAKATGIQGRIVNVSS-SIHSWFSGDMIRYLGQISRNKSHYDATRAYA 207
           L+TK ++ +M    K  G  G +V VSS +    F G     LG              Y 
Sbjct: 125 LMTKAVVPEM---EKRGG--GSVVIVSSVAAFHPFPG-----LG-------------PYN 161

Query: 208 LSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTR 247
           +SK A +  TK LA  L     N+ VNC+ PG+++T  + 
Sbjct: 162 VSKTALLGLTKNLAPELAPR--NIRVNCLAPGLIKTSFSS 199

This subgroup contains porcine peroxisomal carbonyl reductase and similar proteins. The porcine enzyme efficiently reduces retinals. This subgroup also includes human dehydrogenase/reductase (SDR family) member 4 (DHRS4), and human DHRS4L1. DHRS4 is a peroxisomal enzyme with 3beta-hydroxysteroid dehydrogenase activity; it catalyzes the reduction of 3-keto-C19/C21-steroids into 3beta-hydroxysteroids more efficiently than it does the retinal reduction. The human DHRS4 gene cluster contains DHRS4, DHRS4L2 and DHRS4L1. DHRS4L2 and DHRS4L1 are paralogs of DHRS4, DHRS4L2 being the most recent member. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 256

>gnl|CDD|235794 PRK06398, PRK06398, aldose dehydrogenase; Validated

 Score = 54.1 bits (130), Expect = 2e-08
 Identities = 51/219 (23%), Positives = 87/219 (39%), Gaps = 40/219 (18%)

Query: 31  PNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVV 90
             L    AI+TG + GIG      L + G+ ++     +K                    
Sbjct: 2   LGLKDKVAIVTGGSQGIGKAVVNRLKEEGSNVI--NFDIKEPSYNDVDY----------- 48

Query: 91  LPLDLSSLSSVRNFVSQFHSLNLPLNLLINNAG--KFAHQHAISEDGIEMTFATNYLGHF 148
             +D+S+   V   +    S    +++L+NNAG   +   HA+ ED  +     N  G F
Sbjct: 49  FKVDVSNKEQVIKGIDYVISKYGRIDILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIF 108

Query: 149 LLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYAL 208
           L++K  +  M++  K     G I+N+ +S+ S+           ++RN +      AY  
Sbjct: 109 LMSKYTIPYMLKQDK-----GVIINI-ASVQSFA----------VTRNAA------AYVT 146

Query: 209 SKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTR 247
           SK A +  T+ +A         +    V PG +RT L  
Sbjct: 147 SKHAVLGLTRSIAVDYAPT---IRCVAVCPGSIRTPLLE 182

Length = 258

>gnl|CDD|236399 PRK09186, PRK09186, flagellin modification protein A; Provisional

 Score = 53.8 bits (130), Expect = 2e-08
 Identities = 50/217 (23%), Positives = 88/217 (40%), Gaps = 29/217 (13%)

Query: 33  LSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLP 92
           L   T +ITGA   IG+   + + + G  ++      +A  E    L  +     + ++ 
Sbjct: 2   LKGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVE 61

Query: 93  LDLSSLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAISEDGIEMT----FATNYLGHF 148
           LD++   S+  F+S+       ++  +N A      +      + +       + +LG  
Sbjct: 62  LDITDQESLEEFLSKSAEKYGKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSS 121

Query: 149 LLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATR---- 204
               L  ++  +  K  G  G +VN+ SSI+           G ++     Y+ T     
Sbjct: 122 F---LFSQQFAKYFKKQG-GGNLVNI-SSIY-----------GVVAPKFEIYEGTSMTSP 165

Query: 205 -AYALSKLANVLH-TKELAQRLKQMEANVTVNCVHPG 239
             YA  K A ++H TK LA+  K    N+ VNCV PG
Sbjct: 166 VEYAAIK-AGIIHLTKYLAKYFKDS--NIRVNCVSPG 199

Length = 256

>gnl|CDD|187611 cd05353, hydroxyacyl-CoA-like_DH_SDR_c-like, (3R)-hydroxyacyl-CoA dehydrogenase-like, classical(c)-like SDRs

 Score = 53.5 bits (129), Expect = 3e-08
 Identities = 58/230 (25%), Positives = 95/230 (41%), Gaps = 59/230 (25%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVL---------PARSLKAA----EEAKARLASDC 83
             ++TGA  G+G   A   A+RGA++V+           +S  AA    +E KA      
Sbjct: 7   VVLVTGAGGGLGRAYALAFAERGAKVVVNDLGGDRKGSGKSSSAADKVVDEIKAAGGKAV 66

Query: 84  PGSDIVVLPLDLSSLSSVRNFVSQFHSLNLPLNLLINNAG-----KFAHQHAISEDGIEM 138
              D V    D   +  V+  +  F      +++L+NNAG      FA    +SE+  ++
Sbjct: 67  ANYDSV---EDGEKI--VKTAIDAFGR----VDILVNNAGILRDRSFAK---MSEEDWDL 114

Query: 139 TFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSS--IHSWFSGDMIRYLGQISRN 196
               +  G F +T+     M +        GRI+N SS+  ++  F        GQ    
Sbjct: 115 VMRVHLKGSFKVTRAAWPYMRKQKF-----GRIINTSSAAGLYGNF--------GQ---- 157

Query: 197 KSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLT 246
            ++Y A +   L  L+N L   E A+       N+T N + P    +R+T
Sbjct: 158 -ANYSAAKL-GLLGLSNTL-AIEGAKY------NITCNTIAP-AAGSRMT 197

Beta oxidation of fatty acids in eukaryotes occurs by a four-reaction cycle, that may take place in mitochondria or in peroxisomes. (3R)-hydroxyacyl-CoA dehydrogenase is part of rat peroxisomal multifunctional MFE-2, it is a member of the NAD-dependent SDRs, but contains an additional small C-terminal domain that completes the active site pocket and participates in dimerization. The atypical, additional C-terminal extension allows for more extensive dimerization contact than other SDRs. MFE-2 catalyzes the second and third reactions of the peroxisomal beta oxidation cycle. Proteins in this subgroup have a typical catalytic triad, but have a His in place of the usual upstream Asn. This subgroup also contains members identified as 17-beta-hydroxysteroid dehydrogenases, including human peroxisomal 17-beta-hydroxysteroid dehydrogenase type 4 (17beta-HSD type 4, aka MFE-2, encoded by HSD17B4 gene) which is involved in fatty acid beta-oxidation and steroid metabolism. This subgroup also includes two SDR domains of the Neurospora crassa and Saccharomyces cerevisiae multifunctional beta-oxidation protein (MFP, aka Fox2). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 250

>gnl|CDD|187642 cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase (DHB DH)-like, classical (c) SDR

 Score = 53.3 bits (128), Expect = 4e-08
 Identities = 60/221 (27%), Positives = 82/221 (37%), Gaps = 54/221 (24%)

Query: 38  AIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSS 97
            ++TGA  GIG   A  LA  GAR++L  RS    E     LA+   G    V   DL +
Sbjct: 7   VVVTGAAQGIGRGVAERLAGEGARVLLVDRSELVHEVLAEILAA---GDAAHVHTADLET 63

Query: 98  LSS----VRNFVSQFHSLNLPLNLLINNAG-----KFAHQHAISEDGIEMTFATNYLGHF 148
            +     VR  V +F      +++LINN G     K  ++H   E+ IE     +     
Sbjct: 64  YAGAQGVVRAAVERFGR----VDVLINNVGGTIWAKP-YEH-YEEEQIEAEIRRSLFPTL 117

Query: 149 LLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATR---- 204
              + +L  M+E       QG IVNVSS                         ATR    
Sbjct: 118 WCCRAVLPHMLERQ-----QGVIVNVSS------------------------IATRGIYR 148

Query: 205 -AYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTR 244
             Y+ +K      T  LA   +     + VN V PG     
Sbjct: 149 IPYSAAKGGVNALTASLA--FEHARDGIRVNAVAPGGTEAP 187

DHB DH (aka 1,2-dihydroxycyclohexa-3,5-diene-1-carboxylate dehydrogenase) catalyzes the NAD-dependent conversion of 1,2-dihydroxycyclohexa-3,4-diene carboxylate to a catechol. This subgroup also contains Pseudomonas putida F1 CmtB, 2,3-dihydroxy-2,3-dihydro-p-cumate dehydrogenase, the second enzyme in the pathway for catabolism of p-cumate catabolism. This subgroup shares the glycine-rich NAD-binding motif of the classical SDRs and shares the same catalytic triad; however, the upstream Asn implicated in cofactor binding or catalysis in other SDRs is generally substituted by a Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 256

>gnl|CDD|182531 PRK10538, PRK10538, malonic semialdehyde reductase; Provisional

 Score = 53.2 bits (128), Expect = 4e-08
 Identities = 36/146 (24%), Positives = 69/146 (47%), Gaps = 13/146 (8%)

Query: 39  IITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSL 98
           ++TGAT+G G    R   ++G +++   R  +  +E K  L     G ++ +  LD+ + 
Sbjct: 4   LVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDEL-----GDNLYIAQLDVRNR 58

Query: 99  SSVRNFVSQFHSLNLPLNLLINNAG---KFAHQHAISEDGIEMTFATNYLGHFLLTKLLL 155
           +++   ++   +    +++L+NNAG        H  S +  E    TN  G   +T+ +L
Sbjct: 59  AAIEEMLASLPAEWRNIDVLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVL 118

Query: 156 KKMIETAKATGIQGRIVNVSSSIHSW 181
             M+E        G I+N+ S+  SW
Sbjct: 119 PGMVERNH-----GHIINIGSTAGSW 139

Length = 248

>gnl|CDD|181120 PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 53.6 bits (129), Expect = 4e-08
 Identities = 47/156 (30%), Positives = 76/156 (48%), Gaps = 8/156 (5%)

Query: 26  VTDGCPNLSSVTAIITGATSGIGAETARVLAKRGARLVL-PARSLKAAEEAKARLASDCP 84
            T    +LS   A++TGA +G+G   A  LA+ GA +V+    S   A +    + +   
Sbjct: 3   RTTNTTDLSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRA--A 60

Query: 85  GSDIVVLPLDLSSLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQ--HAISEDGIEMTFAT 142
           G+  V +  D+S  ++    V+    L   L++++NNAG    +    +S++  +   A 
Sbjct: 61  GAKAVAVAGDISQRATADELVATAVGLG-GLDIVVNNAGITRDRMLFNMSDEEWDAVIAV 119

Query: 143 NYLGHFLLTKLLLKKMIETAKATG--IQGRIVNVSS 176
           +  GHFLLT+         AKA G  + GRIVN SS
Sbjct: 120 HLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSS 155

Length = 306

>gnl|CDD|180838 PRK07102, PRK07102, short chain dehydrogenase; Provisional

 Score = 53.0 bits (128), Expect = 5e-08
 Identities = 63/213 (29%), Positives = 84/213 (39%), Gaps = 36/213 (16%)

Query: 40  ITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCP---GSDIVVLPLDLS 96
           I GATS I    AR  A  GARL L AR ++  E    RLA D        +    LD+ 
Sbjct: 6   IIGATSDIARACARRYAAAGARLYLAARDVERLE----RLADDLRARGAVAVSTHELDIL 61

Query: 97  SLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAISEDGIE--MTFATNYLGHFLLTKLL 154
             +S   F+    +L    ++++   G    Q A   D       F TN+ G       L
Sbjct: 62  DTASHAAFLDSLPAL---PDIVLIAVGTLGDQAACEADPALALREFRTNFEG----PIAL 114

Query: 155 LKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLANV 214
           L  +    +A G  G IV +SS      +GD  R         S+Y     Y  +K A  
Sbjct: 115 LTLLANRFEARG-SGTIVGISS-----VAGDRGR--------ASNY----VYGSAKAALT 156

Query: 215 LHTKELAQRLKQMEANVTVNCVHPGIVRTRLTR 247
                L  RL   ++ V V  V PG VRT +T 
Sbjct: 157 AFLSGLRNRL--FKSGVHVLTVKPGFVRTPMTA 187

Length = 243

>gnl|CDD|235813 PRK06482, PRK06482, short chain dehydrogenase; Provisional

 Score = 53.2 bits (128), Expect = 5e-08
 Identities = 47/146 (32%), Positives = 72/146 (49%), Gaps = 14/146 (9%)

Query: 35  SVTAIITGATSGIGAE-TARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPL 93
           S T  ITGA+SG G   T R+LA RG R+    R   A ++ KAR      G  + VL L
Sbjct: 2   SKTWFITGASSGFGRGMTERLLA-RGDRVAATVRRPDALDDLKARY-----GDRLWVLQL 55

Query: 94  DLSSLSSVRNFVSQFHSLNLPLNLLINNAGK--FAHQHAISEDGIEMTFATNYLGHFLLT 151
           D++  ++VR  V +  +    ++++++NAG   F     +S+  I     TN +G   + 
Sbjct: 56  DVTDSAAVRAVVDRAFAALGRIDVVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVI 115

Query: 152 KLLLKKMIETAKATGIQGRIVNVSSS 177
           +  L  +    +  G  GRIV VSS 
Sbjct: 116 RAALPHL----RRQG-GGRIVQVSSE 136

Length = 276

>gnl|CDD|180771 PRK06947, PRK06947, glucose-1-dehydrogenase; Provisional

 Score = 52.9 bits (127), Expect = 5e-08
 Identities = 64/215 (29%), Positives = 95/215 (44%), Gaps = 30/215 (13%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLS 96
             +ITGA+ GIG  TA + A RG  + +      AA E  A       G   VV   D++
Sbjct: 4   VVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAG-DVA 62

Query: 97  SLSSVRNFVSQFHSLNLP---LNLLINNAGKFAHQHAISE---DGIEMTFATNYLGHFLL 150
           + + V   ++ F ++      L+ L+NNAG  A    +++     +   F TN LG +L 
Sbjct: 63  NEADV---IAMFDAVQSAFGRLDALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLC 119

Query: 151 TKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSK 210
            +   +++       G  G IVNVSS         +   LG  S N+ + D    YA SK
Sbjct: 120 AREAARRLSTDRGGRG--GAIVNVSS---------IASRLG--SPNE-YVD----YAGSK 161

Query: 211 LANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRL 245
            A    T  LA+ L      V VN V PG++ T +
Sbjct: 162 GAVDTLTLGLAKELGP--HGVRVNAVRPGLIETEI 194

Length = 248

>gnl|CDD|181334 PRK08263, PRK08263, short chain dehydrogenase; Provisional

 Score = 52.3 bits (126), Expect = 8e-08
 Identities = 35/140 (25%), Positives = 59/140 (42%), Gaps = 14/140 (10%)

Query: 40  ITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLS 99
           ITGA+ G G        +RG R+V  AR      +   +      G  ++ L LD++  +
Sbjct: 8   ITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKY-----GDRLLPLALDVTDRA 62

Query: 100 SVRNFVSQFHSLNLPLNLLINNAGKFAHQHAI---SEDGIEMTFATNYLGHFLLTKLLLK 156
           +V   V         L++++NNAG +     I   +E        TN+ G   +T+ +L 
Sbjct: 63  AVFAAVETAVEHFGRLDIVVNNAG-YGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLP 121

Query: 157 KMIETAKATGIQGRIVNVSS 176
            + E        G I+ +SS
Sbjct: 122 YLREQRS-----GHIIQISS 136

Length = 275

>gnl|CDD|187664 cd09763, DHRS1-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) -like, classical (c) SDRs

 Score = 52.1 bits (125), Expect = 1e-07
 Identities = 57/240 (23%), Positives = 85/240 (35%), Gaps = 64/240 (26%)

Query: 33  LSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLK-----AAEEAKARLASDCPGSD 87
           LS   A++TGA+ GIG   A  L + GA + +  R++       AEE +AR      G  
Sbjct: 1   LSGKIALVTGASRGIGRGIALQLGEAGATVYITGRTILPQLPGTAEEIEAR------GGK 54

Query: 88  IVVLPLDLSSLSSVRNFVSQFHS-LNLPLNLLINNAGKFAHQHAISED------------ 134
            + +  D S    V     +        L++L+NNA   A Q  +               
Sbjct: 55  CIPVRCDHSDDDEVEALFERVAREQQGRLDILVNNAYA-AVQLILVGVAKPFWEEPPTIW 113

Query: 135 ------GIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIR 188
                 G+   +A +         L++K           +G IV     I S      + 
Sbjct: 114 DDINNVGLRAHYACSVYA----APLMVKAG---------KGLIVI----ISSTGG---LE 153

Query: 189 YLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRE 248
           YL  +           AY + K A      ++A  LK     V V  + PG VRT L  E
Sbjct: 154 YLFNV-----------AYGVGKAAIDRMAADMAHELKP--HGVAVVSLWPGFVRTELVLE 200

This subgroup includes human DHRS1 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 265

>gnl|CDD|234422 TIGR03971, SDR_subfam_1, oxidoreductase, SDR family

 Score = 51.8 bits (124), Expect = 1e-07
 Identities = 56/223 (25%), Positives = 82/223 (36%), Gaps = 38/223 (17%)

Query: 38  AIITGATSGIGAETARVLAKRGARLVL------PARSLK---AAEEAKARLAS--DCPGS 86
           A ITGA  G G   A  LA  GA ++        +       A  E     A   +  G 
Sbjct: 6   AFITGAARGQGRAHAVRLAAEGADIIAIDLCAPLSDYPTYPLATREDLDETARLVEALGR 65

Query: 87  DIVVLPLDLSSLSSVRNFVSQFHSLNLPLNLLINNAG--KFAHQHAISEDGIEMTFATNY 144
            ++    D+  L+ VR  V         L++++ NAG   +     +SE+  +     N 
Sbjct: 66  KVLARKADVRDLAEVRAVVEDGVEQFGRLDVVVANAGVLSYGRSWELSEEQWDTVLDINL 125

Query: 145 LGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSG-DMIRYLGQISRNKSHYDAT 203
            G +   K ++  MIE     G  G I+  SS      +G   +  L             
Sbjct: 126 TGVWRTCKAVVPHMIE----RGNGGSIIITSSV-----AGLKALPGLAH----------- 165

Query: 204 RAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLT 246
             YA +K   V  TK LA  L   E  + VN +HP  V T + 
Sbjct: 166 --YAAAKHGLVGLTKTLANELA--EYGIRVNSIHPYSVDTPMI 204

Members of this protein subfamily are putative oxidoreductases belonging to the larger SDR family. Members of the present subfamily may occur several to a genome and are largely restricted to genomes that contain members of families TIGR03962, TIGR03967, and TIGR03969. Many members have been annotated by homology as carveol dehydrogenases. Length = 265

>gnl|CDD|131468 TIGR02415, 23BDH, acetoin reductases

 Score = 51.7 bits (124), Expect = 1e-07
 Identities = 52/214 (24%), Positives = 89/214 (41%), Gaps = 27/214 (12%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLS 96
            A++TG   GIG   A  LAK G  + +   + + A+E    +     G   V   LD+S
Sbjct: 2   VALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQA--GGKAVAYKLDVS 59

Query: 97  SLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQH--AISEDGIEMTFATNYLGHFLLTKLL 154
               V + + Q        ++++NNAG         I+E+ ++  +  N  G        
Sbjct: 60  DKDQVFSAIDQAAEKFGGFDVMVNNAGVAPITPILEITEEELKKVYNVNVKG----VLFG 115

Query: 155 LKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLANV 214
           ++      K  G  G+I+N +S      +G       + +   S Y +T+ +A+  L   
Sbjct: 116 IQAAARQFKKQGHGGKIINAAS-----IAGH------EGNPILSAYSSTK-FAVRGLTQT 163

Query: 215 LHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRE 248
              +ELA +       +TVN   PGIV+T +  E
Sbjct: 164 A-AQELAPK------GITVNAYCPGIVKTPMWEE 190

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PMID:11577733) [Energy metabolism, Fermentation]. Length = 254

>gnl|CDD|187589 cd05328, 3alpha_HSD_SDR_c, alpha hydroxysteroid dehydrogenase (3alpha_HSD), classical (c) SDRs

 Score = 51.7 bits (124), Expect = 1e-07
 Identities = 54/225 (24%), Positives = 82/225 (36%), Gaps = 46/225 (20%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLS 96
           T +ITGA SGIGA TA +L   G  ++                  D   +D++    DLS
Sbjct: 1   TIVITGAASGIGAATAELLEDAGHTVI----------------GIDLREADVIA---DLS 41

Query: 97  SLSSVRNFVSQFHSL-NLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLL 155
           +       ++   +  +  L+ L+N AG              +    NY G   L + LL
Sbjct: 42  TPEGRAAAIADVLARCSGVLDGLVNCAG-VGGT-----TVAGLVLKVNYFGLRALMEALL 95

Query: 156 KKMIETAKATGIQGRIVNVSS--SIH----------SWFSGDMIRYLGQISRNKSHYDAT 203
            ++       G     V VSS               +  +G   R +  ++ +       
Sbjct: 96  PRL-----RKGHGPAAVVVSSIAGAGWAQDKLELAKALAAGTEARAVA-LAEHAGQ-PGY 148

Query: 204 RAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRE 248
            AYA SK A  + T+  A       A V VN V PG V T + + 
Sbjct: 149 LAYAGSKEALTVWTRRRA-ATWLYGAGVRVNTVAPGPVETPILQA 192

Bacterial 3-alpha_HSD, which catalyzes the NAD-dependent oxidoreduction of hydroxysteroids, is a dimeric member of the classical SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|181077 PRK07677, PRK07677, short chain dehydrogenase; Provisional

 Score = 51.6 bits (124), Expect = 1e-07
 Identities = 42/150 (28%), Positives = 73/150 (48%), Gaps = 9/150 (6%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLS 96
             IITG +SG+G   A+  A+ GA +V+  R+ +  EEAK  +        ++ + +D+ 
Sbjct: 3   VVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQ--FPGQVLTVQMDVR 60

Query: 97  SLSSVRNFVSQFHSLNLPLNLLINN-AGKF-AHQHAISEDGIEMTFATNYLGHFLLTKLL 154
           +   V+  V Q       ++ LINN AG F      +S +G          G F  ++ +
Sbjct: 61  NPEDVQKMVEQIDEKFGRIDALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAV 120

Query: 155 LKKMIETAKATGIQGRIVNVSSSIHSWFSG 184
            K  IE     GI+G I+N+ ++ ++W +G
Sbjct: 121 GKYWIE----KGIKGNIINMVAT-YAWDAG 145

Length = 252

>gnl|CDD|187595 cd05334, DHPR_SDR_c_like, dihydropteridine reductase (DHPR), classical (c) SDRs

 Score = 51.2 bits (123), Expect = 1e-07
 Identities = 48/238 (20%), Positives = 80/238 (33%), Gaps = 50/238 (21%)

Query: 39  IITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSL 98
           ++ G    +G+   +    RG  +      L   EEA A          I+VL  D S  
Sbjct: 5   LVYGGRGALGSAVVQAFKSRGWWVAS--IDLAENEEADAS---------IIVLDSD-SFT 52

Query: 99  SSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAISEDGIEMT---FATNYLGHFLLTKLLL 155
              +  V+    L+  ++ LI  AG +A   A S+  ++     +  N    F+ + L  
Sbjct: 53  EQAKQVVASVARLSGKVDALICVAGGWAGGSAKSKSFVKNWDLMWKQNLWTSFIASHLAT 112

Query: 156 KKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLANVL 215
           K ++         G +V   +      +  MI                  Y  +K A   
Sbjct: 113 KHLLSG-------GLLVLTGAKAALEPTPGMI-----------------GYGAAKAAVHQ 148

Query: 216 HTKELAQRLKQMEANVTVNCVHPGIVRTRLTRE-----------REGFITDLVFFLTS 262
            T+ LA     + A  T N + P  + T   R+              FI +L+ F  S
Sbjct: 149 LTQSLAAENSGLPAGSTANAILPVTLDTPANRKAMPDADFSSWTPLEFIAELILFWAS 206

Dihydropteridine reductase is an NAD-binding protein related to the SDRs. It converts dihydrobiopterin into tetrahydrobiopterin, a cofactor necessary in catecholamines synthesis. Dihydropteridine reductase has the YXXXK of these tyrosine-dependent oxidoreductases, but lacks the typical upstream Asn and Ser catalytic residues. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 221

>gnl|CDD|180823 PRK07074, PRK07074, short chain dehydrogenase; Provisional

 Score = 51.3 bits (123), Expect = 2e-07
 Identities = 50/211 (23%), Positives = 86/211 (40%), Gaps = 33/211 (15%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLS 96
           TA++TGA  GIG   AR     G R++       A       L      +  V +  DL+
Sbjct: 4   TALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADAL----GDARFVPVACDLT 59

Query: 97  SLSSVRNFVSQFHSLNLPLNLLINNAG--KFAHQHAISEDGIEMTFATNYLGHFLLTKLL 154
             +S+   ++   +   P+++L+ NAG  + A  H  +        A N    +L  + +
Sbjct: 60  DAASLAAALANAAAERGPVDVLVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAV 119

Query: 155 LKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLANV 214
           L+ M++ ++     G +VN+ S                   N        AY+ +K A +
Sbjct: 120 LEGMLKRSR-----GAVVNIGSV------------------NGMAALGHPAYSAAK-AGL 155

Query: 215 LH-TKELAQRLKQMEANVTVNCVHPGIVRTR 244
           +H TK LA    +    +  N V PG V+T+
Sbjct: 156 IHYTKLLAVEYGRF--GIRANAVAPGTVKTQ 184

Length = 257

>gnl|CDD|181159 PRK07890, PRK07890, short chain dehydrogenase; Provisional

 Score = 51.1 bits (123), Expect = 2e-07
 Identities = 49/214 (22%), Positives = 80/214 (37%), Gaps = 38/214 (17%)

Query: 33  LSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLP 92
           L     +++G   G+G   A   A+ GA +VL AR+ +  +E  A +     G   + +P
Sbjct: 3   LKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDL--GRRALAVP 60

Query: 93  LDLSSLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQH-----AISEDGIEMTFATNYLGH 147
            D++      N V+        ++ L+NNA  F                      N LG 
Sbjct: 61  TDITDEDQCANLVALALERFGRVDALVNNA--FRVPSMKPLADADFAHWRAVIELNVLGT 118

Query: 148 FLLTKLLLKKMIETAKATGIQGRIVNVSSSI--HSWFSGDMIRYLGQISRNKSHYDATRA 205
             LT+     + E+       G IV ++S +  HS       +Y               A
Sbjct: 119 LRLTQAFTPALAES------GGSIVMINSMVLRHS-----QPKY--------------GA 153

Query: 206 YALSKLANVLHTKELAQRLKQMEANVTVNCVHPG 239
           Y ++K A +  ++ LA  L      + VN V PG
Sbjct: 154 YKMAKGALLAASQSLATELG--PQGIRVNSVAPG 185

Length = 258

>gnl|CDD|235739 PRK06200, PRK06200, 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

 Score = 50.7 bits (122), Expect = 3e-07
 Identities = 54/220 (24%), Positives = 82/220 (37%), Gaps = 48/220 (21%)

Query: 38  AIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSS 97
           A+ITG  SGIG          GAR+ +  RS       K        G  ++V+  D++S
Sbjct: 9   ALITGGGSGIGRALVERFLAEGARVAVLERS-----AEKLASLRQRFGDHVLVVEGDVTS 63

Query: 98  LSS----VRNFVSQFHSLNLPLNLLINNAGKFAHQHA---ISEDGI-----EMTFATNYL 145
            +     V   V  F      L+  + NAG + +  +   I  + +     E+ F  N  
Sbjct: 64  YADNQRAVDQTVDAFGK----LDCFVGNAGIWDYNTSLVDIPAETLDTAFDEI-FNVNVK 118

Query: 146 GHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRA 205
           G+ L  K  L  +  +  +      I  +S+S  S++ G               Y A   
Sbjct: 119 GYLLGAKAALPALKASGGSM-----IFTLSNS--SFYPG----------GGGPLYTA--- 158

Query: 206 YALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRL 245
              SK A V   ++LA  L      + VN V PG   T L
Sbjct: 159 ---SKHAVVGLVRQLAYELA---PKIRVNGVAPGGTVTDL 192

Length = 263

>gnl|CDD|187599 cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-like, classical (c) SDRs

 Score = 50.7 bits (121), Expect = 3e-07
 Identities = 52/210 (24%), Positives = 90/210 (42%), Gaps = 30/210 (14%)

Query: 39  IITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSL 98
           ++TGA+ GIG E A   A+ GA ++L  R+ +   +    +  +          LDL + 
Sbjct: 8   LVTGASDGIGREAALTYARYGATVILLGRNEEKLRQVADHINEEGGRQPQ-WFILDLLTC 66

Query: 99  SS--VRNFVSQFHSLNLPLNLLINNAGKFAHQHAISEDGIEM---TFATNYLGHFLLTKL 153
           +S   +    +       L+ +++NAG       +SE   ++       N    F+LT+ 
Sbjct: 67  TSENCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPLSEQNPQVWQDVXQVNVNATFMLTQA 126

Query: 154 LLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLAN 213
           LL  ++++   +     +V  SSS+            G+  R         AYA+SK A 
Sbjct: 127 LLPLLLKSDAGS-----LVFTSSSV------------GRQGRAN-----WGAYAVSKFAT 164

Query: 214 VLHTKELAQRLKQMEANVTVNCVHPGIVRT 243
               + LA   +Q   N+ VNC++PG  RT
Sbjct: 165 EGLXQVLADEYQQR--NLRVNCINPGGTRT 192

Escherichia coli K-12 YCIK and related proteins have a canonical classical SDR nucleotide-binding motif and active site tetrad. They are predicted oxoacyl-(acyl carrier protein/ACP) reductases. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 236

>gnl|CDD|180371 PRK06057, PRK06057, short chain dehydrogenase; Provisional

 Score = 50.5 bits (121), Expect = 3e-07
 Identities = 78/298 (26%), Positives = 112/298 (37%), Gaps = 68/298 (22%)

Query: 33  LSSVTAIITGATSGIGAETARVLAKRGARLVL----PARSLKAAEEAKARLASDCPGSDI 88
           L+   A+ITG  SGIG  TAR LA  GA +V+    P     AA+E              
Sbjct: 5   LAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEV-----------GG 53

Query: 89  VVLPLDLSSLSSVRNFVSQFHSLNLPLNLLINNAG-KFAHQHAISEDGIEM---TFATNY 144
           + +P D++   +V             +++  NNAG       +I   G++        N 
Sbjct: 54  LFVPTDVTDEDAVNALFDTAAETYGSVDIAFNNAGISPPEDDSILNTGLDAWQRVQDVNL 113

Query: 145 LGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATR 204
              +L  K  L  M+   K     G I+N +S     F   M     QIS          
Sbjct: 114 TSVYLCCKAALPHMVRQGK-----GSIINTAS-----FVAVMGSATSQIS---------- 153

Query: 205 AYALSKLANVLHTKELA-QRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSK 263
            Y  SK   +  ++EL  Q  +Q    + VN + PG V T L +E               
Sbjct: 154 -YTASKGGVLAMSRELGVQFARQ---GIRVNALCPGPVNTPLLQE--------------- 194

Query: 264 LLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWTSKLGSNSNEASRLWAASELLV 321
           L    P+ AA         RLV+V    FA+  E   +     S++AS +  AS  LV
Sbjct: 195 LFAKDPERAAR--------RLVHVPMGRFAEPEEIAAAVAFLASDDASFI-TASTFLV 243

Length = 255

>gnl|CDD|236110 PRK07831, PRK07831, short chain dehydrogenase; Provisional

 Score = 50.4 bits (121), Expect = 3e-07
 Identities = 54/216 (25%), Positives = 91/216 (42%), Gaps = 40/216 (18%)

Query: 37  TAIITGAT-SGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDL 95
             ++T A  +GIG+ TAR   + GAR+V+     +   E    LA++     +  +  D+
Sbjct: 19  VVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDV 78

Query: 96  SSLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAISEDGIEMT-------FATNYLGHF 148
           +S + V   +         L++L+NNAG    Q  +    ++MT             G F
Sbjct: 79  TSEAQVDALIDAAVERLGRLDVLVNNAG-LGGQTPV----VDMTDDEWSRVLDVTLTGTF 133

Query: 149 LLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRA--Y 206
             T+  L+ M    +A G  G IVN ++S+  W          +    ++HY A +A   
Sbjct: 134 RATRAALRYM----RARGHGGVIVN-NASVLGW----------RAQHGQAHYAAAKAGVM 178

Query: 207 ALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVR 242
           AL++ + +    E A      E  V +N V P I  
Sbjct: 179 ALTRCSAL----EAA------EYGVRINAVAPSIAM 204

Length = 262

>gnl|CDD|236209 PRK08265, PRK08265, short chain dehydrogenase; Provisional

 Score = 50.4 bits (121), Expect = 4e-07
 Identities = 21/86 (24%), Positives = 37/86 (43%), Gaps = 5/86 (5%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLS 96
            AI+TG  + IGA  AR L   GAR+ +            A L     G     +  D++
Sbjct: 8   VAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASL-----GERARFIATDIT 62

Query: 97  SLSSVRNFVSQFHSLNLPLNLLINNA 122
             +++   V+   +    +++L+N A
Sbjct: 63  DDAAIERAVATVVARFGRVDILVNLA 88

Length = 261

>gnl|CDD|171531 PRK12481, PRK12481, 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

 Score = 50.3 bits (120), Expect = 4e-07
 Identities = 58/214 (27%), Positives = 94/214 (43%), Gaps = 29/214 (13%)

Query: 32  NLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVL 91
           +L+   AIITG  +G+G   A  LAK GA +V     +  A E +A++  +  G     +
Sbjct: 5   DLNGKVAIITGCNTGLGQGMAIGLAKAGADIV--GVGVAEAPETQAQV--EALGRKFHFI 60

Query: 92  PLDLSSLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAI--SEDGIEMTFATNYLGHFL 149
             DL     + + VSQ   +   +++LINNAG    Q  +       +     N    F 
Sbjct: 61  TADLIQQKDIDSIVSQAVEVMGHIDILINNAGIIRRQDLLEFGNKDWDDVININQKTVFF 120

Query: 150 LTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALS 209
           L++ + K+ +      G  G+I+N++S         M+ + G I           +Y  S
Sbjct: 121 LSQAVAKQFV----KQGNGGKIINIAS---------MLSFQGGIR--------VPSYTAS 159

Query: 210 KLANVLHTKELAQRLKQMEANVTVNCVHPGIVRT 243
           K A +  T+ LA  L Q   N+ VN + PG + T
Sbjct: 160 KSAVMGLTRALATELSQY--NINVNAIAPGYMAT 191

Length = 251

>gnl|CDD|180796 PRK07023, PRK07023, short chain dehydrogenase; Provisional

 Score = 50.0 bits (120), Expect = 4e-07
 Identities = 42/157 (26%), Positives = 62/157 (39%), Gaps = 35/157 (22%)

Query: 35  SVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLD 94
           +V AI+TG + G+GA  A  L + G  ++  ARS   +  A A       G  +  + LD
Sbjct: 1   AVRAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPSLAAAA-------GERLAEVELD 53

Query: 95  LSSLSSV---------RNFVSQFHSLNLPLNLLINNAG------KFAHQHAISEDGIEMT 139
           LS  ++            FV     +     LLINNAG        A   A     I   
Sbjct: 54  LSDAAAAAAWLAGDLLAAFVDGASRV-----LLINNAGTVEPIGPLATLDA---AAIARA 105

Query: 140 FATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSS 176
              N     +LT  L +     A +   + RI+++SS
Sbjct: 106 VGLNVAAPLMLTAALAQ-----AASDAAERRILHISS 137

Length = 243

>gnl|CDD|235910 PRK07024, PRK07024, short chain dehydrogenase; Provisional

 Score = 49.9 bits (120), Expect = 4e-07
 Identities = 62/232 (26%), Positives = 92/232 (39%), Gaps = 70/232 (30%)

Query: 40  ITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLS 99
           ITGA+SGIG   AR  A++GA L L AR   A +   ARL      + + V   D+    
Sbjct: 7   ITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPK---AARVSVYAADVRDAD 63

Query: 100 SVRN----FVSQFHSLNLPLNLLINNAGKFAHQHAIS--------ED--GIEMTFATNYL 145
           ++      F++      LP +++I NAG       IS        ED         TNY 
Sbjct: 64  ALAAAAADFIAAH---GLP-DVVIANAG-------ISVGTLTEEREDLAVFREVMDTNYF 112

Query: 146 GHFLLTKLLLKKMIET------AKATGIQGRIVNVSSSIHSWFSGDMIRYL---GQISRN 196
           G           M+ T            +G +V ++S      +G  +R L   G     
Sbjct: 113 G-----------MVATFQPFIAPMRAARRGTLVGIAS-----VAG--VRGLPGAG----- 149

Query: 197 KSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRE 248
                   AY+ SK A + + + L  R++   A V V  + PG +RT +T  
Sbjct: 150 --------AYSASKAAAIKYLESL--RVELRPAGVRVVTIAPGYIRTPMTAH 191

Length = 257

>gnl|CDD|181518 PRK08643, PRK08643, acetoin reductase; Validated

 Score = 49.7 bits (119), Expect = 5e-07
 Identities = 53/210 (25%), Positives = 89/210 (42%), Gaps = 31/210 (14%)

Query: 38  AIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSS 97
           A++TGA  GIG   A+ L + G ++ +   + + A+ A  +L+ D  G   + +  D+S 
Sbjct: 5   ALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKD--GGKAIAVKADVSD 62

Query: 98  LSSVRNFVSQFHSLNLPLNLLINNAGKFAHQ---HAISEDGIEMTFATNYLGHFLLTKLL 154
              V   V Q       LN+++NNAG  A       I+E+  +  +  N  G        
Sbjct: 63  RDQVFAAVRQVVDTFGDLNVVVNNAG-VAPTTPIETITEEQFDKVYNINVGGVIWGI--- 118

Query: 155 LKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISR-NKSHYDATRAYALSKLAN 213
            +   E  K  G  G+I+N +S              G +     + Y +T+ +A+  L  
Sbjct: 119 -QAAQEAFKKLGHGGKIINATSQA------------GVVGNPELAVYSSTK-FAVRGLTQ 164

Query: 214 VLHTKELAQRLKQMEANVTVNCVHPGIVRT 243
               ++LA         +TVN   PGIV+T
Sbjct: 165 TA-ARDLA------SEGITVNAYAPGIVKT 187

Length = 256

>gnl|CDD|235545 PRK05650, PRK05650, short chain dehydrogenase; Provisional

 Score = 50.0 bits (120), Expect = 5e-07
 Identities = 54/210 (25%), Positives = 79/210 (37%), Gaps = 32/210 (15%)

Query: 40  ITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLS 99
           ITGA SG+G   A   A+ G RL L   + +  EE    L     G D      D+   S
Sbjct: 5   ITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLRE--AGGDGFYQRCDVRDYS 62

Query: 100 SVRNFVSQFHSLNLPLNLLINNAGKFAHQHAISEDGIE---MTFATNYLGHFLLTKLLLK 156
            +             +++++NNAG  A      E  +E      A N +G     K  L 
Sbjct: 63  QLTALAQACEEKWGGIDVIVNNAG-VASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLP 121

Query: 157 KMIETAKATGIQGRIVNVSSSIHSWFSGDM-IRYLGQISRNKSHYDATRAYALSKLANVL 215
                 K     GRIVN++S      +G M    +       S Y+  +A  ++ L+  L
Sbjct: 122 LF----KRQK-SGRIVNIAS-----MAGLMQGPAM-------SSYNVAKAGVVA-LSETL 163

Query: 216 HTKELAQRLKQMEANVTVNCVHPGIVRTRL 245
              ELA         + V+ V P   +T L
Sbjct: 164 LV-ELAD------DEIGVHVVCPSFFQTNL 186

Length = 270

>gnl|CDD|181349 PRK08278, PRK08278, short chain dehydrogenase; Provisional

 Score = 49.9 bits (120), Expect = 6e-07
 Identities = 54/234 (23%), Positives = 90/234 (38%), Gaps = 67/234 (28%)

Query: 31  PNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLK-----------AAEEAKARL 79
            +LS  T  ITGA+ GIG   A   A+ GA +V+ A++ +           AAEE +A  
Sbjct: 2   MSLSGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAA- 60

Query: 80  ASDCPGSDIVVLPLDLSSLSSVRNFVSQ----FHSLNLPLNLLINNAGKFAHQHAISEDG 135
                G   + L  D+     V   V++    F      +++ +NNA       AI+  G
Sbjct: 61  -----GGQALPLVGDVRDEDQVAAAVAKAVERFGG----IDICVNNAS------AINLTG 105

Query: 136 IEMT--------FATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIH---SWFSG 184
            E T           N  G FL+++  L  + ++         I+ +S  ++    WF+ 
Sbjct: 106 TEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENP-----HILTLSPPLNLDPKWFAP 160

Query: 185 DMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHP 238
                               AY ++K    L T  LA+  +  +  + VN + P
Sbjct: 161 HT------------------AYTMAKYGMSLCTLGLAEEFR--DDGIAVNALWP 194

Length = 273

>gnl|CDD|187665 cd09805, type2_17beta_HSD-like_SDR_c, human 17beta-hydroxysteroid dehydrogenase type 2 (type 2 17beta-HSD)-like, classical (c) SDRs

 Score = 50.0 bits (120), Expect = 6e-07
 Identities = 57/221 (25%), Positives = 85/221 (38%), Gaps = 47/221 (21%)

Query: 39  IITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSD-IVVLPLDLSS 97
           +ITG  SG G   A+ L   G   VL     K    AK  L   C  SD +  L LD++ 
Sbjct: 4   LITGCDSGFGNLLAKKLDSLGFT-VLAGCLTKNGPGAKE-LRRVC--SDRLRTLQLDVTK 59

Query: 98  LSSVRNFVSQFHSLNLP---LNLLINNAGKFAHQHAISEDGIEMTFAT-------NYLGH 147
              ++   +Q+   ++    L  L+NNAG          D   +           N  G 
Sbjct: 60  PEQIKR-AAQWVKEHVGEKGLWGLVNNAGILGF----GGDEELLPMDDYRKCMEVNLFGT 114

Query: 148 FLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDM-IRYLGQISRNKSHYDATRAY 206
             +TK  L  ++  AK     GR+VNVSS       G +     G        Y A++A 
Sbjct: 115 VEVTKAFL-PLLRRAK-----GRVVNVSSM-----GGRVPFPAGGA-------YCASKA- 155

Query: 207 ALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTR 247
           A+   ++ L       R +     V V+ + PG  +T +T 
Sbjct: 156 AVEAFSDSL-------RRELQPWGVKVSIIEPGNFKTGITG 189

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. This classical-SDR subgroup includes the human proteins: type 2 17beta-HSD, type 6 17beta-HSD, type 2 11beta-HSD, dehydrogenase/reductase SDR family member 9, short-chain dehydrogenase/reductase family 9C member 7, 3-hydroxybutyrate dehydrogenase type 1, and retinol dehydrogenase 5. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 281

>gnl|CDD|135765 PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydrogenase; Validated

 Score = 49.5 bits (118), Expect = 7e-07
 Identities = 52/212 (24%), Positives = 84/212 (39%), Gaps = 27/212 (12%)

Query: 33  LSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLP 92
           L    AIITGA +GIG E A   A  GA +V+   +  AA      +     G       
Sbjct: 9   LDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQ--LGGQAFACR 66

Query: 93  LDLSSLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQ-HAISEDGIEMTFATNYLGHFLLT 151
            D++S   +        S    +++L+NNAG    +   +        +  N    F L+
Sbjct: 67  CDITSEQELSALADFALSKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLS 126

Query: 152 KLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKL 211
           +L+  +M    K  G  G I+ ++S      + +          NK+    +  YA SK 
Sbjct: 127 QLVAPEM---EKNGG--GVILTITS-----MAAE----------NKNINMTS--YASSKA 164

Query: 212 ANVLHTKELAQRLKQMEANVTVNCVHPGIVRT 243
           A     + +A  L +   N+ VN + PG + T
Sbjct: 165 AASHLVRNMAFDLGEK--NIRVNGIAPGAILT 194

Length = 255

>gnl|CDD|177895 PLN02253, PLN02253, xanthoxin dehydrogenase

 Score = 49.1 bits (117), Expect = 1e-06
 Identities = 53/220 (24%), Positives = 79/220 (35%), Gaps = 31/220 (14%)

Query: 30  CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIV 89
              L    A++TG  +GIG    R+  K GA++ +        +     L  +    ++ 
Sbjct: 13  SQRLLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGGE---PNVC 69

Query: 90  VLPLDLSSLSSVRNFVSQFHSLNLPLNLLINNAG----KFAHQHAISEDGIEMTFATNYL 145
               D++    V   V         L++++NNAG           +     E  F  N  
Sbjct: 70  FFHCDVTVEDDVSRAVDFTVDKFGTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVK 129

Query: 146 GHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRA 205
           G FL  K   + MI   K     G IV++ S          I  LG             A
Sbjct: 130 GVFLGMKHAARIMIPLKK-----GSIVSLCS------VASAIGGLG-----------PHA 167

Query: 206 YALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRL 245
           Y  SK A +  T+ +A  L +    + VNCV P  V T L
Sbjct: 168 YTGSKHAVLGLTRSVAAELGKH--GIRVNCVSPYAVPTAL 205

Length = 280

>gnl|CDD|183719 PRK12747, PRK12747, short chain dehydrogenase; Provisional

 Score = 48.9 bits (116), Expect = 1e-06
 Identities = 58/225 (25%), Positives = 95/225 (42%), Gaps = 37/225 (16%)

Query: 33  LSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLK-AAEEAKARLASDCPGSDIVVL 91
           L    A++TGA+ GIG   A+ LA  GA + +   + K  AEE    + S+  G     +
Sbjct: 2   LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSN--GGSAFSI 59

Query: 92  PLDLSSLSSVRNFVS------QFHSLNLPLNLLINNA--GKFAHQHAISEDGIEMTFATN 143
             +L SL  V    S      Q  + +   ++LINNA  G  A     +E   +   + N
Sbjct: 60  GANLESLHGVEALYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVN 119

Query: 144 YLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDAT 203
               F + +  L ++ + +       RI+N+SS+       D I                
Sbjct: 120 AKAPFFIIQQALSRLRDNS-------RIINISSAATRISLPDFI---------------- 156

Query: 204 RAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRE 248
            AY+++K A    T  LA++L      +TVN + PG ++T +  E
Sbjct: 157 -AYSMTKGAINTMTFTLAKQLGAR--GITVNAILPGFIKTDMNAE 198

Length = 252

>gnl|CDD|183772 PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

 Score = 48.0 bits (115), Expect = 2e-06
 Identities = 44/155 (28%), Positives = 62/155 (40%), Gaps = 35/155 (22%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLS 96
             ++TGA  GIG   A   A  GAR+VL  RS +   E  A L +   G + + L  DL 
Sbjct: 10  VVVVTGAAQGIGRGVALRAAAEGARVVLVDRS-ELVHEVAAELRA--AGGEALALTADLE 66

Query: 97  SL----SSVRNFVSQFHSLNLPLNLLINNAG------KFAHQHAISEDGIEMT-----FA 141
           +     +++   V  F      +++LINN G       F       E+ IE       F 
Sbjct: 67  TYAGAQAAMAAAVEAFGR----IDVLINNVGGTIWAKPFEE---YEEEQIEAEIRRSLFP 119

Query: 142 TNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSS 176
           T +         +L  M+         G IVNVSS
Sbjct: 120 TLWCCR-----AVLPHMLAQG-----GGAIVNVSS 144

Length = 260

>gnl|CDD|187631 cd05373, SDR_c10, classical (c) SDR, subgroup 10

 Score = 47.4 bits (113), Expect = 3e-06
 Identities = 33/133 (24%), Positives = 46/133 (34%), Gaps = 3/133 (2%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLS 96
            A + GA  G+GA  AR  A  G  + L AR     E     +  D  G     +P D  
Sbjct: 1   VAAVVGAGDGLGAAIARRFAAEGFSVALAARREAKLEALLVDIIRDAGG-SAKAVPTDAR 59

Query: 97  SLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQH--AISEDGIEMTFATNYLGHFLLTKLL 154
               V            PL +L+ NAG          +    E  +     G FL  +  
Sbjct: 60  DEDEVIALFDLIEEEIGPLEVLVYNAGANVWFPILETTPRVFEKVWEMAAFGGFLAAREA 119

Query: 155 LKKMIETAKATGI 167
            K+M+   + T I
Sbjct: 120 AKRMLARGRGTII 132

This subgroup resembles the classical SDRs, but has an incomplete match to the canonical glycine rich NAD-binding motif and lacks the typical active site tetrad (instead of the critical active site Tyr, it has Phe, but contains the nearby Lys). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 238

>gnl|CDD|187656 cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup 2, complex (x) SDRs

 Score = 47.7 bits (114), Expect = 4e-06
 Identities = 30/88 (34%), Positives = 48/88 (54%), Gaps = 4/88 (4%)

Query: 40  ITGATSGIGAETARVLAKR-GARLVLPARS-LKAAEEAKARLASDC--PGSDIVVLPLDL 95
           +TG   GIG   AR LA+R GARLVL  RS L   EE KA+  +     G+ ++ +  D+
Sbjct: 210 VTGGAGGIGRALARALARRYGARLVLLGRSPLPPEEEWKAQTLAALEALGARVLYISADV 269

Query: 96  SSLSSVRNFVSQFHSLNLPLNLLINNAG 123
           +  ++VR  + +       ++ +I+ AG
Sbjct: 270 TDAAAVRRLLEKVRERYGAIDGVIHAAG 297

Ketoreductase, a module of the multidomain polyketide synthase (PKS), has 2 subdomains, each corresponding to a SDR family monomer. The C-terminal subdomain catalyzes the NADPH-dependent reduction of the beta-carbonyl of a polyketide to a hydroxyl group, a step in the biosynthesis of polyketides, such as erythromycin. The N-terminal subdomain, an interdomain linker, is a truncated Rossmann fold which acts to stabilizes the catalytic subdomain. Unlike typical SDRs, the isolated domain does not oligomerize but is composed of 2 subdomains, each resembling an SDR monomer. The active site resembles that of typical SDRs, except that the usual positions of the catalytic Asn and Tyr are swapped, so that the canonical YXXXK motif changes to YXXXN. Modular PKSs are multifunctional structures in which the makeup recapitulates that found in (and may have evolved from) FAS. Polyketide synthesis also proceeds via the addition of 2-carbon units as in fatty acid synthesis. The complex SDR NADP-binding motif, GGXGXXG, is often present, but is not strictly conserved in each instance of the module. This subfamily includes both KR domains of the Bacillus subtilis Pks J,-L, and PksM, and all three KR domains of PksN, components of the megacomplex bacillaene synthase, which synthesizes the antibiotic bacillaene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 436

>gnl|CDD|180753 PRK06924, PRK06924, short chain dehydrogenase; Provisional

 Score = 47.0 bits (112), Expect = 4e-06
 Identities = 52/219 (23%), Positives = 87/219 (39%), Gaps = 34/219 (15%)

Query: 38  AIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSS 97
            IITG + G+G   A  L ++G  ++  +R+    E  +    ++   S++    LDL  
Sbjct: 4   VIITGTSQGLGEAIANQLLEKGTHVISISRT----ENKELTKLAEQYNSNLTFHSLDLQD 59

Query: 98  LSSV-RNFVSQFHSL---NLPLNLLINNAGKFAHQHAISEDGIEMTFATNY----LGHFL 149
           +  +  NF     S+   N+    LINNAG  A    I +   E    TN     L   +
Sbjct: 60  VHELETNFNEILSSIQEDNVSSIHLINNAGMVAPIKPIEKAESEE-LITNVHLNLLAPMI 118

Query: 150 LTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALS 209
           LT   +K      K   +  R++N+SS                    K+ Y    AY  S
Sbjct: 119 LTSTFMKH----TKDWKVDKRVINISS-----------------GAAKNPYFGWSAYCSS 157

Query: 210 KLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRE 248
           K    + T+ +A   ++ E  V +    PG++ T +  +
Sbjct: 158 KAGLDMFTQTVATEQEEEEYPVKIVAFSPGVMDTNMQAQ 196

Length = 251

>gnl|CDD|212496 cd11730, Tthb094_like_SDR_c, Tthb094 and related proteins, classical (c) SDRs

 Score = 46.0 bits (109), Expect = 6e-06
 Identities = 36/130 (27%), Positives = 52/130 (40%), Gaps = 15/130 (11%)

Query: 38  AIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSS 97
           A+I GAT GIG   AR LA RG RL+L  R   A     A + +       +  P D+++
Sbjct: 1   ALILGATGGIGRALARALAGRGWRLLLSGRDAGALAGLAAEVGA-------LARPADVAA 53

Query: 98  LSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAISEDG---IEMTFATNYLGHFLLTKLL 154
              V    +    L  PL+LL+  AG       ++             N  G  L+ K  
Sbjct: 54  ELEVW---ALAQELG-PLDLLVYAAGA-ILGKPLARTKPAAWRRILDANLTGAALVLKHA 108

Query: 155 LKKMIETAKA 164
           L  +   A+ 
Sbjct: 109 LALLAAGARL 118

Tthb094 from Thermus Thermophilus is a classical SDR which binds NADP. Members of this subgroup contain the YXXXK active site characteristic of SDRs. Also, an upstream Asn residue of the canonical catalytic tetrad is partially conserved in this subgroup of proteins of undetermined function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 206

>gnl|CDD|236099 PRK07791, PRK07791, short chain dehydrogenase; Provisional

 Score = 46.6 bits (111), Expect = 7e-06
 Identities = 61/227 (26%), Positives = 90/227 (39%), Gaps = 44/227 (19%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVL---------PARSLKAAEEAKARLASDCPGSD 87
             I+TGA  GIG   A   A  GAR+V+          A    AA+     + +   G +
Sbjct: 8   VVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVA--AGGE 65

Query: 88  IVVLPLDLSSLSSVRNFVSQFHSLNLPLNLLINNAG-----KFAHQHAISEDGIEMTFAT 142
            V    D++      N V         L++L+NNAG       A    +SE+  +   A 
Sbjct: 66  AVANGDDIADWDGAANLVDAAVETFGGLDVLVNNAGILRDRMIA---NMSEEEWDAVIAV 122

Query: 143 NYLGHFLLTKLLLKKMIETAKA-TGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYD 201
           +  GHF   +         +KA   +  RI+N SS      +G       Q S  + +Y 
Sbjct: 123 HLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSG-----AGL------QGSVGQGNYS 171

Query: 202 ATRA--YALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLT 246
           A +A   AL+ +A        A  L +    VTVN + P   RTR+T
Sbjct: 172 AAKAGIAALTLVA--------AAELGRY--GVTVNAIAP-AARTRMT 207

Length = 286

>gnl|CDD|235608 PRK05786, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 46.3 bits (110), Expect = 8e-06
 Identities = 41/203 (20%), Positives = 75/203 (36%), Gaps = 28/203 (13%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLS 96
              I G + G+G   A    K GA++ + +R+    +  K  L+      +I  +  D+S
Sbjct: 7   KVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKY---GNIHYVVGDVS 63

Query: 97  SLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLK 156
           S  S RN + +   +   ++ L+   G +         G+E     +           L+
Sbjct: 64  STESARNVIEKAAKVLNAIDGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLR 123

Query: 157 KMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLANVLH 216
            + E +        IV VSS          +  + + S ++  Y   +A  L+K   +L 
Sbjct: 124 FLKEGSS-------IVLVSS----------MSGIYKASPDQLSYAVAKA-GLAKAVEIL- 164

Query: 217 TKELAQRLKQMEANVTVNCVHPG 239
             EL  R       + VN + P 
Sbjct: 165 ASELLGR------GIRVNGIAPT 181

Length = 238

>gnl|CDD|181517 PRK08642, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 45.9 bits (109), Expect = 9e-06
 Identities = 57/224 (25%), Positives = 93/224 (41%), Gaps = 45/224 (20%)

Query: 33  LSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLP 92
           +S  T ++TG + G+GA  AR  A+ GAR+V+     + A EA   LA +  G   + L 
Sbjct: 3   ISEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEA---LADEL-GDRAIALQ 58

Query: 93  LDLSSLSSVRNFVSQ----FHSLNLPLNLLINNA---GKF---AHQHA--ISEDGIEMTF 140
            D++    V+   +     F     P+  ++NNA     F   A + A  I+ +  +   
Sbjct: 59  ADVTDREQVQAMFATATEHFGK---PITTVVNNALADFSFDGDARKKADDITWEDFQQQL 115

Query: 141 ATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSH- 199
             +  G     +  L  M E        GRI+N+ +++   F   ++ Y         H 
Sbjct: 116 EGSVKGALNTIQAALPGMREQG-----FGRIINIGTNL---FQNPVVPY---------HD 158

Query: 200 YDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRT 243
           Y   +A  L        T+ LA  L      +TVN V  G++RT
Sbjct: 159 YTTAKAALLG------LTRNLAAELGP--YGITVNMVSGGLLRT 194

Length = 253

>gnl|CDD|130890 TIGR01831, fabG_rel, 3-oxoacyl-(acyl-carrier-protein) reductase, putative

 Score = 45.7 bits (108), Expect = 1e-05
 Identities = 54/214 (25%), Positives = 95/214 (44%), Gaps = 26/214 (12%)

Query: 39  IITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSL 98
           ++TGA+ GIG   A  LA  G  + +   S ++  E+    A    G +  +L  D++  
Sbjct: 2   LVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVS-AIQAQGGNARLLQFDVADR 60

Query: 99  SSVRNFVSQFHSLNLPLNLLINNAG--KFAHQHAISEDGIEMTFATNYLGHFLLTKLLLK 156
            + R  +    + +     ++ NAG  + A   A+SE+  ++   TN  G + +      
Sbjct: 61  VACRTLLEADIAEHGAYYGVVLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTM 120

Query: 157 KMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLANVLH 216
            MI   +     GRI+ ++S      SG M       +R + +Y A +A  +        
Sbjct: 121 PMIRARQG----GRIITLAS-----VSGVMG------NRGQVNYSAAKAGLIGA------ 159

Query: 217 TKELAQRLKQMEANVTVNCVHPGIVRTRLTRERE 250
           TK LA  L + +  +TVNC+ PG++ T +  E E
Sbjct: 160 TKALAVELAKRK--ITVNCIAPGLIDTEMLAEVE 191

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239

>gnl|CDD|187658 cd08955, KR_2_FAS_SDR_x, beta-ketoacyl reductase (KR) domain of fatty acid synthase (FAS), subgroup 2, complex (x)

 Score = 45.4 bits (108), Expect = 2e-05
 Identities = 33/90 (36%), Positives = 48/90 (53%), Gaps = 5/90 (5%)

Query: 37  TAIITGATSGIGAETARVLAKRGAR-LVLPARS--LKAAEEAKARLASDCPGSDIVVLPL 93
           T +ITG   G+G   A  L +RGAR LVL  R     AA +A A L     G+++VVL  
Sbjct: 151 TYLITGGLGGLGLLVAEWLVERGARHLVLTGRRAPSAAARQAIAALEEA--GAEVVVLAA 208

Query: 94  DLSSLSSVRNFVSQFHSLNLPLNLLINNAG 123
           D+S   ++   ++Q  +   PL  +I+ AG
Sbjct: 209 DVSDRDALAAALAQIRASLPPLRGVIHAAG 238

Ketoreductase, a module of the multidomain polyketide synthase, has 2 subdomains, each corresponding to a short-chain dehydrogenases/reductase (SDR) family monomer. The C-terminal subdomain catalyzes the NADPH-dependent reduction of the beta-carbonyl of a polyketide to a hydroxyl group, a step in the biosynthesis of polyketides, such as erythromycin. The N-terminal subdomain, an interdomain linker, is a truncated Rossmann fold which acts to stabilizes the catalytic subdomain. Unlike typical SDRs, the isolated domain does not oligomerizes but is composed of 2 subdomains, each resembling an SDR monomer. In some instances, as in porcine FAS, an enoyl reductase (a Rossman fold NAD binding domain of the MDR family) module is inserted between the sub-domains. The active site resembles that of typical SDRs, except that the usual positions of the catalytic asparagine and tyrosine are swapped, so that the canonical YXXXK motif changes to YXXXN. Modular polyketide synthases are multifunctional structures in which the makeup recapitulates that found in (and may have evolved from) fatty acid synthase. In some instances, such as porcine FAS , an enoyl reductase module is inserted between the sub-domains. Fatty acid synthesis occurs via the stepwise elongation of a chain (which is attached to acyl carrier protein, ACP) with 2-carbon units. Eukaryotic systems consists of large, multifunctional synthases (type I) while bacterial, type II systems, use single function proteins. Fungal fatty acid synthesis uses dodecamer of 6 alpha and 6 beta subunits. In mammalian type FAS cycles, ketoacyl synthase forms acetoacetyl-ACP which is reduced by the NADP-dependent beta-ketoacyl reductase (KR), forming beta-hydroxyacyl-ACP, which is in turn dehydrated by dehydratase to a beta-enoyl intermediate, which is reduced by NADP-dependent beta-enoyl reductase (ER). Polyketide syntheses also proceeds via the addition of 2-carbon units as in fatty acid synthesis. The complex SDR NADP binding motif, GGXGXXG, is often present, but is not strictly conserved in each instance of the module. This subfamily includes the KR domain of the Lyngbya majuscule Jam J, -K, and #L which are encoded on the jam gene cluster and are involved in the synthesis of the Jamaicamides (neurotoxins); Lyngbya majuscule Jam P belongs to a different KR_FAS_SDR_x subfamily. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 376

>gnl|CDD|180300 PRK05875, PRK05875, short chain dehydrogenase; Provisional

 Score = 44.8 bits (106), Expect = 2e-05
 Identities = 50/220 (22%), Positives = 82/220 (37%), Gaps = 35/220 (15%)

Query: 33  LSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLP 92
               T ++TG  SGIG   A  L   GA +++  R+      A   + +      +   P
Sbjct: 5   FQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEP 64

Query: 93  LDLSSLSSVRNFVSQFHSLNLPLNLLINNAG---KFAHQHAISEDGIEMTFATNYLGHFL 149
            D++    V   V    + +  L+ +++ AG          I  D    T   N  G   
Sbjct: 65  ADVTDEDQVARAVDAATAWHGRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMY 124

Query: 150 LTKLLLKKMIETAKATGIQGRIVNVS----SSIHSWFSGDMIRYLGQISRNKSHYDATRA 205
           + K   ++++      G  G  V +S    S+ H WF                      A
Sbjct: 125 VLKHAARELVR-----GGGGSFVGISSIAASNTHRWFG---------------------A 158

Query: 206 YALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRL 245
           Y ++K A V H  +LA   +   + V VN + PG++RT L
Sbjct: 159 YGVTKSA-VDHLMKLAAD-ELGPSWVRVNSIRPGLIRTDL 196

Length = 276

>gnl|CDD|187636 cd08931, SDR_c9, classical (c) SDR, subgroup 9

 Score = 44.4 bits (105), Expect = 2e-05
 Identities = 35/154 (22%), Positives = 60/154 (38%), Gaps = 17/154 (11%)

Query: 40  ITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLS 99
           ITGA SGIG ETA + A+ G  + L            A L ++     +V   LD++  +
Sbjct: 5   ITGAASGIGRETALLFARNGWFVGLYDIDEDGLAALAAELGAEN----VVAGALDVTDRA 60

Query: 100 SVRNFVSQF-HSLNLPLNLLINNAG--KFAHQHAISEDGIEMTFATNYLGHF-------- 148
           +    ++ F  +    L+ L NNAG  +      +     +     N  G          
Sbjct: 61  AWAAALADFAAATGGRLDALFNNAGVGRGGPFEDVPLAAHDRMVDINVKGVLNGAYAALP 120

Query: 149 LLTKLLLKKMIETAKATGIQG--RIVNVSSSIHS 180
            L      ++I TA ++ I G   +   S++  +
Sbjct: 121 YLKATPGARVINTASSSAIYGQPDLAVYSATKFA 154

This subgroup has the canonical active site tetrad and NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 227

>gnl|CDD|236116 PRK07856, PRK07856, short chain dehydrogenase; Provisional

 Score = 44.5 bits (106), Expect = 3e-05
 Identities = 59/223 (26%), Positives = 82/223 (36%), Gaps = 54/223 (24%)

Query: 32  NLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVL 91
           +L+    ++TG T GIGA  AR     GA +V+  R   A E    R A           
Sbjct: 3   DLTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRR--APETVDGRPAE--------FH 52

Query: 92  PLDLSSLSSVRNFVSQFHSLNLPLNLLINNAG--KFAHQHAISEDGIEMTFATNYLGHFL 149
             D+     V   V      +  L++L+NNAG   +A     S    E     N L   L
Sbjct: 53  AADVRDPDQVAALVDAIVERHGRLDVLVNNAGGSPYALAAEASPRFHEKIVELNLLAPLL 112

Query: 150 LTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATR----- 204
           + +     M    +  G  G IVN+ S                +S         R     
Sbjct: 113 VAQAANAVM--QQQPGG--GSIVNIGS----------------VS-------GRRPSPGT 145

Query: 205 -AYALSKLANVLH-TKELAQRLKQME--ANVTVNCVHPGIVRT 243
            AY  +K A +L+ T+ LA     +E    V VN V  G+VRT
Sbjct: 146 AAYGAAK-AGLLNLTRSLA-----VEWAPKVRVNAVVVGLVRT 182

Length = 252

>gnl|CDD|181508 PRK08628, PRK08628, short chain dehydrogenase; Provisional

 Score = 44.6 bits (106), Expect = 3e-05
 Identities = 59/209 (28%), Positives = 88/209 (42%), Gaps = 31/209 (14%)

Query: 39  IITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSL 98
           I+TG  SGIGA  +  LA+ GA  V+  RS    E A+   A          + +DL+  
Sbjct: 11  IVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDDEFAEELRAL---QPRAEFVQVDLTDD 67

Query: 99  SSVRNFVSQFHSLNLPLNLLINNAGK--FAHQHAISEDGIEMTFATNYLGHFLLTKLLLK 156
           +  R+ V Q  +    ++ L+NNAG        A  E  +  +   N + ++++    L 
Sbjct: 68  AQCRDAVEQTVAKFGRIDGLVNNAGVNDGVGLEAGREAFVA-SLERNLIHYYVMAHYCLP 126

Query: 157 KMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLANVLH 216
            +    KA+  +G IVN+SS              GQ          T  YA +K A +  
Sbjct: 127 HL----KAS--RGAIVNISSK---------TALTGQ--------GGTSGYAAAKGAQLAL 163

Query: 217 TKELAQRLKQMEANVTVNCVHPGIVRTRL 245
           T+E A  L   +  V VN V P  V T L
Sbjct: 164 TREWAVAL--AKDGVRVNAVIPAEVMTPL 190

Length = 258

>gnl|CDD|169390 PRK08340, PRK08340, glucose-1-dehydrogenase; Provisional

 Score = 44.0 bits (104), Expect = 4e-05
 Identities = 38/130 (29%), Positives = 61/130 (46%), Gaps = 14/130 (10%)

Query: 39  IITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSL 98
           ++T ++ GIG   AR L K+GAR+V+ +R+ +  E+A   L       ++  +  DLS  
Sbjct: 4   LVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEY---GEVYAVKADLSDK 60

Query: 99  SSVRNFVSQFHSLNLPLNLLINNAGK------FAHQHAISEDGIEM----TFATNYLGHF 148
             ++N V +   L   ++ L+ NAG         H+ A   D +E       A  YL   
Sbjct: 61  DDLKNLVKEAWELLGGIDALVWNAGNVRCEPCMLHE-AGYSDWLEAALLHLVAPGYLTTL 119

Query: 149 LLTKLLLKKM 158
           L+   L KKM
Sbjct: 120 LIQAWLEKKM 129

Length = 259

>gnl|CDD|181605 PRK08993, PRK08993, 2-deoxy-D-gluconate 3-dehydrogenase; Validated

 Score = 43.7 bits (103), Expect = 5e-05
 Identities = 50/217 (23%), Positives = 91/217 (41%), Gaps = 29/217 (13%)

Query: 32  NLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVL 91
           +L    A++TG  +G+G   A  LA+ G  +V    ++    E   ++ +   G   + L
Sbjct: 7   SLEGKVAVVTGCDTGLGQGMALGLAEAGCDIV--GINIVEPTETIEQVTAL--GRRFLSL 62

Query: 92  PLDLSSLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAI--SEDGIEMTFATNYLGHFL 149
             DL  +  +   + +  +    +++L+NNAG    + AI  SE   +     N    F 
Sbjct: 63  TADLRKIDGIPALLERAVAEFGHIDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFF 122

Query: 150 LTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALS 209
           +++   K  I    A G  G+I+N++S         M+ + G I           +Y  S
Sbjct: 123 MSQAAAKHFI----AQGNGGKIINIAS---------MLSFQGGIR--------VPSYTAS 161

Query: 210 KLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLT 246
           K   +  T+ +A    +   N+ VN + PG + T  T
Sbjct: 162 KSGVMGVTRLMANEWAKH--NINVNAIAPGYMATNNT 196

Length = 253

>gnl|CDD|171822 PRK12938, PRK12938, acetyacetyl-CoA reductase; Provisional

 Score = 43.8 bits (103), Expect = 5e-05
 Identities = 61/251 (24%), Positives = 100/251 (39%), Gaps = 58/251 (23%)

Query: 33  LSSVTAIITGATSGIGAETARVLAKRGARLVL-----PARSLKAAEEAKARLASDCPGSD 87
           +S   A +TG   GIG    + L K G ++V        R +K  E+ KA       G D
Sbjct: 1   MSQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKAL------GFD 54

Query: 88  IVVLPLDLSSLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAISEDGI--EMTFA---- 141
            +    ++    S +    +  +    +++L+NNAG       I+ D +  +MT      
Sbjct: 55  FIASEGNVGDWDSTKAAFDKVKAEVGEIDVLVNNAG-------ITRDVVFRKMTREDWTA 107

Query: 142 ---TNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKS 198
              TN    F +TK ++  M+E        GRI+N+SS                ++  K 
Sbjct: 108 VIDTNLTSLFNVTKQVIDGMVERG-----WGRIINISS----------------VNGQKG 146

Query: 199 HYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVF 258
            +  T  Y+ +K      T  LAQ +      VTVN V PG + T + +     + +   
Sbjct: 147 QFGQTN-YSTAKAGIHGFTMSLAQEVAT--KGVTVNTVSPGYIGTDMVKAIRPDVLE--- 200

Query: 259 FLTSKLLKTIP 269
               K++ TIP
Sbjct: 201 ----KIVATIP 207

Length = 246

>gnl|CDD|166421 PLN02780, PLN02780, ketoreductase/ oxidoreductase

 Score = 44.1 bits (104), Expect = 5e-05
 Identities = 52/223 (23%), Positives = 96/223 (43%), Gaps = 40/223 (17%)

Query: 38  AIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLS- 96
           A++TG T GIG   A  LA++G  LVL AR+    ++    + S    + I  + +D S 
Sbjct: 56  ALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSG 115

Query: 97  ----SLSSVRNFVSQFHSLNLPLNLLINNAG------KFAHQHAISEDGIEMTFATNYLG 146
                +  ++  +       L + +LINN G      +F H+  + E+ ++     N  G
Sbjct: 116 DIDEGVKRIKETI-----EGLDVGVLINNVGVSYPYARFFHE--VDEELLKNLIKVNVEG 168

Query: 147 HFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAY 206
              +T+ +L  M++  K     G I+N+ S        D +          + Y AT+AY
Sbjct: 169 TTKVTQAVLPGMLKRKK-----GAIINIGSGAAIVIPSDPLY---------AVYAATKAY 214

Query: 207 ALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRER 249
            + + +  L+       ++  ++ + V C  P  V T++   R
Sbjct: 215 -IDQFSRCLY-------VEYKKSGIDVQCQVPLYVATKMASIR 249

Length = 320

>gnl|CDD|181126 PRK07806, PRK07806, short chain dehydrogenase; Provisional

 Score = 43.6 bits (103), Expect = 6e-05
 Identities = 20/50 (40%), Positives = 31/50 (62%), Gaps = 5/50 (10%)

Query: 33 LSSVTAIITGATSGIGAETARVLAKRGARLVL-----PARSLKAAEEAKA 77
          L   TA++TG++ GIGA+TA++LA  GA +V+       R+ K   E +A
Sbjct: 4  LPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEA 53

Length = 248

>gnl|CDD|236389 PRK09134, PRK09134, short chain dehydrogenase; Provisional

 Score = 43.4 bits (103), Expect = 7e-05
 Identities = 40/141 (28%), Positives = 62/141 (43%), Gaps = 10/141 (7%)

Query: 37  TAIITGATSGIGAETARVLAKRG-ARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDL 95
            A++TGA   IG   A  LA  G    V   RS   AE   A + +   G   V L  DL
Sbjct: 11  AALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRAL--GRRAVALQADL 68

Query: 96  SSLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKL 153
           +  + VR  V++  +   P+ LL+NNA  F +    + +    +   ATN    F+L + 
Sbjct: 69  ADEAEVRALVARASAALGPITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQA 128

Query: 154 LLKKMIETAKATGIQGRIVNV 174
             + +   A     +G +VN+
Sbjct: 129 FARALPADA-----RGLVVNM 144

Length = 258

>gnl|CDD|236173 PRK08177, PRK08177, short chain dehydrogenase; Provisional

 Score = 42.3 bits (100), Expect = 1e-04
 Identities = 53/211 (25%), Positives = 84/211 (39%), Gaps = 35/211 (16%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLS 96
           TA+I GA+ G+G      L +RG ++    R  +     +A      PG  I    LD++
Sbjct: 3   TALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQA-----LPGVHI--EKLDMN 55

Query: 97  SLSSVRNFVSQFHSLNLPLNLLINNAGKF--AHQHAISEDGIEMT--FATNYLGHFLLTK 152
             +S+   + +        +LL  NAG    AHQ A      E+   F TN +    L +
Sbjct: 56  DPASLDQLLQRLQG--QRFDLLFVNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLAR 113

Query: 153 LLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLA 212
            LL ++         QG +  +SS + S    D              Y A++A AL+ + 
Sbjct: 114 RLLGQVRPG------QGVLAFMSSQLGSVELPD--------GGEMPLYKASKA-ALNSMT 158

Query: 213 NVLHTKELAQRLKQMEANVTVNCVHPGIVRT 243
                       +  E  +TV  +HPG V+T
Sbjct: 159 RSFVA-------ELGEPTLTVLSMHPGWVKT 182

Length = 225

>gnl|CDD|187655 cd08952, KR_1_SDR_x, ketoreductase (KR), subgroup 1, complex (x) SDRs

 Score = 43.3 bits (103), Expect = 1e-04
 Identities = 20/45 (44%), Positives = 26/45 (57%), Gaps = 1/45 (2%)

Query: 37  TAIITGATSGIGAETARVLAKRGA-RLVLPARSLKAAEEAKARLA 80
           T ++TG T  +GA  AR LA+RGA  LVL +R    A  A   +A
Sbjct: 232 TVLVTGGTGALGAHVARWLARRGAEHLVLTSRRGPDAPGAAELVA 276

Ketoreductase, a module of the multidomain polyketide synthase (PKS), has 2 subdomains, each corresponding to a SDR family monomer. The C-terminal subdomain catalyzes the NADPH-dependent reduction of the beta-carbonyl of a polyketide to a hydroxyl group, a step in the biosynthesis of polyketides, such as erythromycin. The N-terminal subdomain, an interdomain linker, is a truncated Rossmann fold which acts to stabilizes the catalytic subdomain. Unlike typical SDRs, the isolated domain does not oligomerize but is composed of 2 subdomains, each resembling an SDR monomer. The active site resembles that of typical SDRs, except that the usual positions of the catalytic Asn and Tyr are swapped, so that the canonical YXXXK motif changes to YXXXN. Modular PKSs are multifunctional structures in which the makeup recapitulates that found in (and may have evolved from) FAS. Polyketide synthesis also proceeds via the addition of 2-carbon units as in fatty acid synthesis. The complex SDR NADP-binding motif, GGXGXXG, is often present, but is not strictly conserved in each instance of the module. This subfamily includes KR domains found in many multidomain PKSs, including six of seven Sorangium cellulosum PKSs (encoded by spiDEFGHIJ) which participate in the synthesis of the polyketide scaffold of the cytotoxic spiroketal polyketide spirangien. These seven PKSs have either a single PKS module (SpiF), two PKR modules (SpiD,-E,-I,-J), or three PKS modules (SpiG,-H). This subfamily includes the single KR domain of SpiF, the first KR domains of SpiE,-G,H,-I,and #J, the third KR domain of SpiG, and the second KR domain of SpiH. The second KR domains of SpiE,-G, I, and #J, and the KR domains of SpiD, belong to a different KR_FAS_SDR subfamily. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 480

>gnl|CDD|180439 PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydrogenase; Provisional

 Score = 41.2 bits (97), Expect = 3e-04
 Identities = 56/220 (25%), Positives = 93/220 (42%), Gaps = 46/220 (20%)

Query: 32  NLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVL 91
           NL     I+TG +SGIG    + L   GA +V     +   +             +   +
Sbjct: 6   NLQGKIIIVTGGSSGIGLAIVKELLANGANVVNA--DIHGGDGQ---------HENYQFV 54

Query: 92  PLDLSSLSSVRNFVSQFHSLNLPLNLLINNAG----------KFAH-QHAISEDGIEMTF 140
           P D+SS   V + V++       ++ L+NNAG          K    ++ ++E   +  F
Sbjct: 55  PTDVSSAEEVNHTVAEIIEKFGRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMF 114

Query: 141 ATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHY 200
             N  G FL+++ + ++M++        G IVN+SS   +   G         S  +S Y
Sbjct: 115 NINQKGVFLMSQAVARQMVKQHD-----GVIVNMSS--EAGLEG---------SEGQSCY 158

Query: 201 DATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGI 240
            AT+A AL+       T+  A+ L +   N+ V  V PGI
Sbjct: 159 AATKA-ALNSF-----TRSWAKELGKH--NIRVVGVAPGI 190

Length = 266

>gnl|CDD|183797 PRK12859, PRK12859, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 40.9 bits (96), Expect = 4e-04
 Identities = 51/222 (22%), Positives = 91/222 (40%), Gaps = 51/222 (22%)

Query: 38  AIITGAT--SGIGAETARVLAKRGARLVLPA-----RSLKAAEEA--KARLASD--CPGS 86
           A++TG +   GIGA   + LA+ GA +         + +    +   + +L  +    G 
Sbjct: 9   AVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGV 68

Query: 87  DIVVLPLDLSS-------LSSVRNFVSQFHSLNLPLNLLINNA--GKFAHQHAISEDGIE 137
            +  + LDL+        L+ V         L  P ++L+NNA          ++ + ++
Sbjct: 69  KVSSMELDLTQNDAPKELLNKVTE------QLGYP-HILVNNAAYSTNNDFSNLTAEELD 121

Query: 138 MTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNK 197
             +  N     LL+     +  +  K +G  GRI+N++S     F G M+   G++    
Sbjct: 122 KHYMVNVRATTLLS-SQFARGFD--KKSG--GRIINMTS---GQFQGPMV---GEL---- 166

Query: 198 SHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPG 239
                  AYA +K A    T  LA  +      +TVN ++PG
Sbjct: 167 -------AYAATKGAIDALTSSLAAEVA--HLGITVNAINPG 199

Length = 256

>gnl|CDD|169556 PRK08703, PRK08703, short chain dehydrogenase; Provisional

 Score = 41.1 bits (96), Expect = 4e-04
 Identities = 20/69 (28%), Positives = 32/69 (46%), Gaps = 1/69 (1%)

Query: 31 PNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVV 90
            LS  T ++TGA+ G+G + A+  A  GA ++L AR  K  E+    +       +   
Sbjct: 2  ATLSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVE-AGHPEPFA 60

Query: 91 LPLDLSSLS 99
          +  DL S  
Sbjct: 61 IRFDLMSAE 69

Length = 239

>gnl|CDD|135637 PRK05876, PRK05876, short chain dehydrogenase; Provisional

 Score = 40.3 bits (94), Expect = 7e-04
 Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 2/86 (2%)

Query: 38  AIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSS 97
           A+ITG  SGIG  T    A+RGAR+VL         +A   L ++  G D+  +  D+  
Sbjct: 9   AVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAE--GFDVHGVMCDVRH 66

Query: 98  LSSVRNFVSQFHSLNLPLNLLINNAG 123
              V +   +   L   ++++ +NAG
Sbjct: 67  REEVTHLADEAFRLLGHVDVVFSNAG 92

Length = 275

>gnl|CDD|169389 PRK08339, PRK08339, short chain dehydrogenase; Provisional

 Score = 39.8 bits (93), Expect = 0.001
 Identities = 23/83 (27%), Positives = 45/83 (54%), Gaps = 1/83 (1%)

Query: 32  NLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVL 91
           +LS   A  T ++ GIG   ARVLA+ GA ++L +R+ +  ++A+ ++ S+    D+  +
Sbjct: 5   DLSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESN-VDVSYI 63

Query: 92  PLDLSSLSSVRNFVSQFHSLNLP 114
             DL+    +   V +  ++  P
Sbjct: 64  VADLTKREDLERTVKELKNIGEP 86

Length = 263

>gnl|CDD|216461 pfam01370, Epimerase, NAD dependent epimerase/dehydratase family

 Score = 39.2 bits (92), Expect = 0.001
 Identities = 39/185 (21%), Positives = 70/185 (37%), Gaps = 31/185 (16%)

Query: 38  AIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSS 97
            ++TG T  IG+   R L + G  +++  R  ++      R         I     DL+ 
Sbjct: 1   ILVTGGTGFIGSHLVRRLLQEGYEVIVLGRRRRSESLNTGR---------IRFHEGDLTD 51

Query: 98  LSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKK 157
             ++   +++     +  + +I+ A + +   A  ED  +     N     L T  LL  
Sbjct: 52  PDALERLLAE-----VQPDAVIHLAAQ-SGVGASFEDPAD-FIRAN----VLGTLRLL-- 98

Query: 158 MIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLANVLHT 217
             E A+  G++ R V  SSS    + GD+           +       YA +KLA     
Sbjct: 99  --EAARRAGVK-RFVFASSS--EVY-GDVA---DPPITEDTPLGPLSPYAAAKLAAERLV 149

Query: 218 KELAQ 222
           +  A+
Sbjct: 150 EAYAR 154

This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions. Length = 233

>gnl|CDD|187653 cd08950, KR_fFAS_SDR_c_like, ketoacyl reductase (KR) domain of fungal-type fatty acid synthase (fFAS), classical (c)-like SDRs

 Score = 39.5 bits (93), Expect = 0.001
 Identities = 27/108 (25%), Positives = 44/108 (40%), Gaps = 11/108 (10%)

Query: 37  TAIITGATSG-IGAETARVLAKRGARLV-----LPARSLKAAEEAKARLASDCPGSDIVV 90
            A++TGA  G IGAE    L   GA ++              ++   +  +   GS + V
Sbjct: 9   VALVTGAGPGSIGAEVVAGLLAGGATVIVTTSRFSHERTAFFQKLYRKHGA--KGSKLWV 66

Query: 91  LPLDLSSLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAISEDGIEM 138
           +P + +S   V   V   +     L   ++    FA   AISE+G  +
Sbjct: 67  VPFNQASKQDVEALVEYIYDEQTKLAWDLDFLFPFA---AISENGRLI 111

KR domain of fungal-type fatty acid synthase (FAS), type I. Fungal-type FAS is a heterododecameric FAS composed of alpha and beta multifunctional polypeptide chains. The KR, an SDR family member, is located centrally in the alpha chain. KR catalyzes the NADP-dependent reduction of ketoacyl-ACP to hydroxyacyl-ACP. KR shares the critical active site Tyr of the Classical SDR and has partial identity of the active site tetrad, but the upstream Asn is replaced in KR by Met. As in other SDRs, there is a glycine rich NAD-binding motif, but the pattern found in KR does not match the classical SDRs, and is not strictly conserved within this group. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 259

>gnl|CDD|187606 cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB)-like, classical (c) SDRs

 Score = 38.9 bits (91), Expect = 0.002
 Identities = 35/158 (22%), Positives = 61/158 (38%), Gaps = 27/158 (17%)

Query: 38  AIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSS 97
           A+ITG  SG+G          GA++ +  RS       K        G  +V +  D+ S
Sbjct: 7   ALITGGGSGLGRALVERFVAEGAKVAVLDRS-----AEKVAELRADFGDAVVGVEGDVRS 61

Query: 98  LSS----VRNFVSQFHSLNLPLNLLINNAGKFAHQHAISE-------DGIEMTFATNYLG 146
           L+     V   V +F      L+  I NAG + +  ++ +       +  +  F  N  G
Sbjct: 62  LADNERAVARCVERFGK----LDCFIGNAGIWDYSTSLVDIPEEKLDEAFDELFHINVKG 117

Query: 147 HFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSG 184
           + L  K  L  +  T      +G ++  + S   ++ G
Sbjct: 118 YILGAKAALPALYAT------EGSVI-FTVSNAGFYPG 148

cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB) is a classical SDR, it is of particular importance for its role in the degradation of biphenyl/polychlorinated biphenyls(PCBs); PCBs are a significant source of environmental contamination. This subgroup also includes Pseudomonas putida F1 cis-biphenyl-1,2-dihydrodiol-1,2-dehydrogenase (aka cis-benzene glycol dehydrogenase, encoded by the bnzE gene), which participates in benzene metabolism. In addition it includes Pseudomonas sp. C18 putative 1,2-dihydroxy-1,2-dihydronaphthalene dehydrogenase (aka dibenzothiophene dihydrodiol dehydrogenase, encoded by the doxE gene) which participates in an upper naphthalene catabolic pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|235914 PRK07041, PRK07041, short chain dehydrogenase; Provisional

 Score = 38.5 bits (90), Expect = 0.002
 Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 3/66 (4%)

Query: 39  IITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSL 98
           ++ G +SGIG   AR  A  GAR+ + +RS      A   L     G+ +    LD++  
Sbjct: 1   LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGG---GAPVRTAALDITDE 57

Query: 99  SSVRNF 104
           ++V  F
Sbjct: 58  AAVDAF 63

Length = 230

>gnl|CDD|223528 COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score = 38.4 bits (89), Expect = 0.003
 Identities = 32/174 (18%), Positives = 56/174 (32%), Gaps = 29/174 (16%)

Query: 39  IITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSL 98
           ++TG    IG+     L   G  +    R     +            S +  + LDL+  
Sbjct: 4   LVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLL---------SGVEFVVLDLTDR 54

Query: 99  SSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKM 158
             V                +I+ A + +   + + D  E     N  G           +
Sbjct: 55  DLVDELAKGVPD------AVIHLAAQSSVPDSNASDPAEF-LDVNVDG--------TLNL 99

Query: 159 IETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLA 212
           +E A+A G++ R V  +SS+   +          I  +         Y +SKLA
Sbjct: 100 LEAARAAGVK-RFV-FASSVSVVYGDPPPLP---IDEDLGPPRPLNPYGVSKLA 148

Length = 314

>gnl|CDD|183716 PRK12744, PRK12744, short chain dehydrogenase; Provisional

 Score = 38.2 bits (89), Expect = 0.003
 Identities = 56/213 (26%), Positives = 83/213 (38%), Gaps = 42/213 (19%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVL----PARSLKAAEEAKARLASDCPGSDIVVLP 92
             +I G    +G   AR LA +GA+ V      A S   AEE  A  A    G+  V   
Sbjct: 10  VVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVA--AVKAAGAKAVAFQ 67

Query: 93  LDLSSLSSV-RNFVSQFHSLNLPLNLLINNAGKFAHQH--AISEDGIEMTFATNYLGHFL 149
            DL++ ++V + F     +   P ++ IN  GK   +    ISE   +  FA N    F 
Sbjct: 68  ADLTTAAAVEKLFDDAKAAFGRP-DIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFF 126

Query: 150 LTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKS---HYDATRAY 206
             K       E  +     G+IV + +S+   F+     Y G    +K+   H+  TRA 
Sbjct: 127 FIK-------EAGRHLNDNGKIVTLVTSLLGAFTPFYSAYAG----SKAPVEHF--TRAA 173

Query: 207 ALSKLANVLHTKELAQRLKQMEANVTVNCVHPG 239
           +          KE   R       ++V  V PG
Sbjct: 174 S----------KEFGAR------GISVTAVGPG 190

Length = 257

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	336
KOG1208	314	consensus Dehydrogenases with different specificit	100.0
KOG1200	256	consensus Mitochondrial/plastidial beta-ketoacyl-A	100.0
PRK05854	313	short chain dehydrogenase; Provisional	100.0
PRK08303	305	short chain dehydrogenase; Provisional	100.0
PRK08339	263	short chain dehydrogenase; Provisional	100.0
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	100.0
PRK06197	306	short chain dehydrogenase; Provisional	100.0
PRK05867	253	short chain dehydrogenase; Provisional	100.0
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	100.0
PRK07063	260	short chain dehydrogenase; Provisional	100.0
PRK06196	315	oxidoreductase; Provisional	100.0
COG0300	265	DltE Short-chain dehydrogenases of various substra	100.0
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08589	272	short chain dehydrogenase; Validated	100.0
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	100.0
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07478	254	short chain dehydrogenase; Provisional	100.0
PRK07062	265	short chain dehydrogenase; Provisional	100.0
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
KOG0725	270	consensus Reductases with broad range of substrate	100.0
PRK06114	254	short chain dehydrogenase; Provisional	100.0
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	100.0
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	100.0
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07791	286	short chain dehydrogenase; Provisional	100.0
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	100.0
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08265	261	short chain dehydrogenase; Provisional	100.0
PRK08085	254	gluconate 5-dehydrogenase; Provisional	100.0
PLN00015	308	protochlorophyllide reductase	100.0
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	100.0
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	100.0
PRK08277	278	D-mannonate oxidoreductase; Provisional	100.0
PRK07985	294	oxidoreductase; Provisional	100.0
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	100.0
PRK07035	252	short chain dehydrogenase; Provisional	100.0
PRK06172	253	short chain dehydrogenase; Provisional	100.0
PRK12747	252	short chain dehydrogenase; Provisional	100.0
PRK07453	322	protochlorophyllide oxidoreductase; Validated	100.0
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	100.0
PRK09242	257	tropinone reductase; Provisional	100.0
PRK07831	262	short chain dehydrogenase; Provisional	100.0
PRK08340	259	glucose-1-dehydrogenase; Provisional	100.0
PRK06128	300	oxidoreductase; Provisional	100.0
PRK07523	255	gluconate 5-dehydrogenase; Provisional	100.0
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	100.0
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	100.0
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	100.0
PRK08643	256	acetoin reductase; Validated	100.0
PRK06398	258	aldose dehydrogenase; Validated	100.0
PRK07097	265	gluconate 5-dehydrogenase; Provisional	100.0
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	100.0
PRK06125	259	short chain dehydrogenase; Provisional	100.0
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	100.0
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	100.0
PRK06484	520	short chain dehydrogenase; Validated	100.0
PRK08862	227	short chain dehydrogenase; Provisional	100.0
PRK08936	261	glucose-1-dehydrogenase; Provisional	100.0
PLN02253	280	xanthoxin dehydrogenase	100.0
KOG4169	261	consensus 15-hydroxyprostaglandin dehydrogenase an	100.0
PRK07067	257	sorbitol dehydrogenase; Provisional	100.0
PRK06940	275	short chain dehydrogenase; Provisional	100.0
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK06124	256	gluconate 5-dehydrogenase; Provisional	100.0
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	100.0
PRK12743	256	oxidoreductase; Provisional	100.0
PRK06139	330	short chain dehydrogenase; Provisional	100.0
PRK07677	252	short chain dehydrogenase; Provisional	100.0
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	100.0
PRK07856	252	short chain dehydrogenase; Provisional	100.0
PRK08226	263	short chain dehydrogenase; Provisional	100.0
PRK06523	260	short chain dehydrogenase; Provisional	100.0
PRK06841	255	short chain dehydrogenase; Provisional	100.0
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	100.0
PRK08278	273	short chain dehydrogenase; Provisional	100.0
PRK07109	334	short chain dehydrogenase; Provisional	100.0
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK05872	296	short chain dehydrogenase; Provisional	100.0
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK07576	264	short chain dehydrogenase; Provisional	100.0
PRK06949	258	short chain dehydrogenase; Provisional	100.0
PRK07814	263	short chain dehydrogenase; Provisional	100.0
PRK05717	255	oxidoreductase; Validated	100.0
PRK06701	290	short chain dehydrogenase; Provisional	100.0
PRK07890	258	short chain dehydrogenase; Provisional	100.0
PRK12939	250	short chain dehydrogenase; Provisional	100.0
PRK06483	236	dihydromonapterin reductase; Provisional	100.0
PRK12938	246	acetyacetyl-CoA reductase; Provisional	100.0
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	100.0
PRK08628	258	short chain dehydrogenase; Provisional	100.0
KOG1207	245	consensus Diacetyl reductase/L-xylulose reductase	100.0
PRK12937	245	short chain dehydrogenase; Provisional	100.0
PRK12742	237	oxidoreductase; Provisional	100.0
PRK05876	275	short chain dehydrogenase; Provisional	100.0
PRK06500	249	short chain dehydrogenase; Provisional	100.0
TIGR02415	254	23BDH acetoin reductases. One member of this famil	100.0
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	100.0
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	100.0
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK09186	256	flagellin modification protein A; Provisional	100.0
PRK05599	246	hypothetical protein; Provisional	100.0
PRK06484	520	short chain dehydrogenase; Validated	100.0
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	100.0
PRK08213	259	gluconate 5-dehydrogenase; Provisional	100.0
PRK08703	239	short chain dehydrogenase; Provisional	100.0
PRK07774	250	short chain dehydrogenase; Provisional	100.0
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	100.0
PRK12935	247	acetoacetyl-CoA reductase; Provisional	100.0
PRK07069	251	short chain dehydrogenase; Validated	100.0
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	100.0
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	100.0
PRK06138	252	short chain dehydrogenase; Provisional	100.0
PRK06947	248	glucose-1-dehydrogenase; Provisional	100.0
PRK05875	276	short chain dehydrogenase; Provisional	100.0
PRK05884	223	short chain dehydrogenase; Provisional	100.0
PRK06057	255	short chain dehydrogenase; Provisional	100.0
PRK12744	257	short chain dehydrogenase; Provisional	100.0
PRK06198	260	short chain dehydrogenase; Provisional	100.0
PRK09134	258	short chain dehydrogenase; Provisional	100.0
PRK08263	275	short chain dehydrogenase; Provisional	100.0
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	100.0
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	100.0
PRK07825	273	short chain dehydrogenase; Provisional	100.0
PRK06123	248	short chain dehydrogenase; Provisional	100.0
PLN02780	320	ketoreductase/ oxidoreductase	100.0
PRK06182	273	short chain dehydrogenase; Validated	100.0
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK06194	287	hypothetical protein; Provisional	100.0
PRK12824	245	acetoacetyl-CoA reductase; Provisional	100.0
KOG1611	249	consensus Predicted short chain-type dehydrogenase	100.0
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	100.0
PRK05855	582	short chain dehydrogenase; Validated	100.0
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	100.0
PRK05866	293	short chain dehydrogenase; Provisional	100.0
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	100.0
PRK07454	241	short chain dehydrogenase; Provisional	100.0
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	100.0
KOG1610	322	consensus Corticosteroid 11-beta-dehydrogenase and	100.0
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	100.0
PRK05650	270	short chain dehydrogenase; Provisional	100.0
PRK05993	277	short chain dehydrogenase; Provisional	100.0
PRK07074	257	short chain dehydrogenase; Provisional	100.0
PRK12827	249	short chain dehydrogenase; Provisional	100.0
PRK07832	272	short chain dehydrogenase; Provisional	100.0
PRK12746	254	short chain dehydrogenase; Provisional	100.0
PRK06180	277	short chain dehydrogenase; Provisional	100.0
PRK07024	257	short chain dehydrogenase; Provisional	100.0
PRK07904	253	short chain dehydrogenase; Provisional	100.0
PRK06924	251	short chain dehydrogenase; Provisional	100.0
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	100.0
PRK07060	245	short chain dehydrogenase; Provisional	100.0
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK07775	274	short chain dehydrogenase; Provisional	100.0
PRK09072	263	short chain dehydrogenase; Provisional	99.98
PRK08251	248	short chain dehydrogenase; Provisional	99.98
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.98
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.98
PRK06914	280	short chain dehydrogenase; Provisional	99.98
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	99.98
PRK10538	248	malonic semialdehyde reductase; Provisional	99.98
PRK08267	260	short chain dehydrogenase; Provisional	99.98
PRK09009	235	C factor cell-cell signaling protein; Provisional	99.97
PRK07577	234	short chain dehydrogenase; Provisional	99.97
PRK06179	270	short chain dehydrogenase; Provisional	99.97
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.97
KOG1199	260	consensus Short-chain alcohol dehydrogenase/3-hydr	99.97
PRK12828	239	short chain dehydrogenase; Provisional	99.97
PRK07806	248	short chain dehydrogenase; Provisional	99.97
COG1028	251	FabG Dehydrogenases with different specificities (	99.97
PRK05693	274	short chain dehydrogenase; Provisional	99.97
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.97
PRK06181	263	short chain dehydrogenase; Provisional	99.97
PRK09135	249	pteridine reductase; Provisional	99.97
PRK12829	264	short chain dehydrogenase; Provisional	99.97
PRK08324	681	short chain dehydrogenase; Validated	99.97
PRK07102	243	short chain dehydrogenase; Provisional	99.97
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	99.97
PRK07041	230	short chain dehydrogenase; Provisional	99.97
PRK06482	276	short chain dehydrogenase; Provisional	99.97
PRK07201	657	short chain dehydrogenase; Provisional	99.97
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.97
PRK07326	237	short chain dehydrogenase; Provisional	99.97
COG0623	259	FabI Enoyl-[acyl-carrier-protein]	99.97
PRK07578	199	short chain dehydrogenase; Provisional	99.97
PRK06101	240	short chain dehydrogenase; Provisional	99.97
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	99.97
PRK07023	243	short chain dehydrogenase; Provisional	99.96
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	99.96
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	99.96
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	99.96
PRK08177	225	short chain dehydrogenase; Provisional	99.96
PRK09291	257	short chain dehydrogenase; Provisional	99.96
PRK08264	238	short chain dehydrogenase; Validated	99.96
KOG1210	331	consensus Predicted 3-ketosphinganine reductase [S	99.95
PRK06953	222	short chain dehydrogenase; Provisional	99.95
PRK08017	256	oxidoreductase; Provisional	99.95
PRK12367	245	short chain dehydrogenase; Provisional	99.95
KOG1204	253	consensus Predicted dehydrogenase [Secondary metab	99.95
PRK12428	241	3-alpha-hydroxysteroid dehydrogenase; Provisional	99.95
PRK08219	227	short chain dehydrogenase; Provisional	99.93
KOG1478	341	consensus 3-keto sterol reductase [Lipid transport	99.93
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	99.92
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	99.91
PLN03209	576	translocon at the inner envelope of chloroplast su	99.88
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	99.88
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	99.88
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	99.87
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	99.87
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	99.85
PLN02583	297	cinnamoyl-CoA reductase	99.84
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	99.83
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	99.83
PRK06720	169	hypothetical protein; Provisional	99.82
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	99.82
PLN02650	351	dihydroflavonol-4-reductase	99.81
PLN02214	342	cinnamoyl-CoA reductase	99.81
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	99.81
PLN02572	442	UDP-sulfoquinovose synthase	99.8
PLN02240	352	UDP-glucose 4-epimerase	99.8
PLN02653	340	GDP-mannose 4,6-dehydratase	99.8
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	99.79
PLN02896	353	cinnamyl-alcohol dehydrogenase	99.78
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	99.77
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	99.75
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	99.75
PLN00198	338	anthocyanidin reductase; Provisional	99.75
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	99.75
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	99.74
PLN02686	367	cinnamoyl-CoA reductase	99.74
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	99.72
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	99.71
PRK10675	338	UDP-galactose-4-epimerase; Provisional	99.7
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	99.7
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	99.69
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	99.68
TIGR01746	367	Thioester-redct thioester reductase domain. It has	99.67
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	99.66
PLN02427	386	UDP-apiose/xylose synthase	99.65
COG1088	340	RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope	99.65
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	99.65
COG1087	329	GalE UDP-glucose 4-epimerase [Cell envelope biogen	99.64
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	99.63
PLN02206	442	UDP-glucuronate decarboxylase	99.63
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	99.61
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	99.61
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	99.6
PLN02166	436	dTDP-glucose 4,6-dehydratase	99.6
PLN02695	370	GDP-D-mannose-3',5'-epimerase	99.6
PLN02260	668	probable rhamnose biosynthetic enzyme	99.59
CHL00194	317	ycf39 Ycf39; Provisional	99.58
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	99.58
PRK11150	308	rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro	99.56
PLN02725	306	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas	99.54
PLN02996	491	fatty acyl-CoA reductase	99.46
KOG1371	343	consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo	99.45
PRK07201	657	short chain dehydrogenase; Provisional	99.44
KOG1430	361	consensus C-3 sterol dehydrogenase/3-beta-hydroxys	99.43
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	99.43
PF07993	249	NAD_binding_4: Male sterility protein; InterPro: I	99.41
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	99.41
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	99.33
PLN02778	298	3,5-epimerase/4-reductase	99.24
PF08643	299	DUF1776: Fungal family of unknown function (DUF177	99.24
KOG1429	350	consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro	99.22
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	99.22
PLN02503	605	fatty acyl-CoA reductase 2	99.21
PRK05865	854	hypothetical protein; Provisional	99.2
COG1091	281	RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo	99.19
COG3320	382	Putative dehydrogenase domain of multifunctional n	99.19
PRK08309	177	short chain dehydrogenase; Provisional	99.18
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	99.15
TIGR03443	1389	alpha_am_amid L-aminoadipate-semialdehyde dehydrog	99.1
PLN00016	378	RNA-binding protein; Provisional	99.09
PLN02260	668	probable rhamnose biosynthetic enzyme	99.09
KOG4022	236	consensus Dihydropteridine reductase DHPR/QDPR [Am	99.06
COG1089	345	Gmd GDP-D-mannose dehydratase [Cell envelope bioge	99.05
TIGR02114	227	coaB_strep phosphopantothenate--cysteine ligase, s	99.04
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.02
PRK12320	699	hypothetical protein; Provisional	99.02
KOG0747	331	consensus Putative NAD+-dependent epimerases [Carb	99.01
KOG2865	391	consensus NADH:ubiquinone oxidoreductase, NDUFA9/3	98.93
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	98.91
COG4982	866	3-oxoacyl-[acyl-carrier protein]	98.82
PRK12548	289	shikimate 5-dehydrogenase; Provisional	98.69
PRK05579	399	bifunctional phosphopantothenoylcysteine decarboxy	98.67
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	98.62
KOG1221	467	consensus Acyl-CoA reductase [Lipid transport and	98.62
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	98.55
KOG1203	411	consensus Predicted dehydrogenase [Carbohydrate tr	98.47
TIGR00521	390	coaBC_dfp phosphopantothenoylcysteine decarboxylas	98.41
COG0702	275	Predicted nucleoside-diphosphate-sugar epimerases	98.37
PRK06732	229	phosphopantothenate--cysteine ligase; Validated	98.36
KOG1202	2376	consensus Animal-type fatty acid synthase and rela	98.32
COG2910	211	Putative NADH-flavin reductase [General function p	98.21
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	98.19
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	98.18
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	98.08
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	98.05
KOG2733	423	consensus Uncharacterized membrane protein [Functi	98.0
PRK09620	229	hypothetical protein; Provisional	98.0
KOG1431	315	consensus GDP-L-fucose synthetase [Carbohydrate tr	98.0
PLN00106	323	malate dehydrogenase	97.92
PRK14982	340	acyl-ACP reductase; Provisional	97.86
KOG4039	238	consensus Serine/threonine kinase TIP30/CC3 [Signa	97.83
KOG1372	376	consensus GDP-mannose 4,6 dehydratase [Carbohydrat	97.8
PTZ00325	321	malate dehydrogenase; Provisional	97.73
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	97.61
PF04127	185	DFP: DNA / pantothenate metabolism flavoprotein; I	97.6
KOG2774	366	consensus NAD dependent epimerase [General functio	97.59
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	97.58
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	97.56
cd01336	325	MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli	97.52
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	97.52
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	97.51
PRK02472	447	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.47
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	97.44
cd00755	231	YgdL_like Family of activating enzymes (E1) of ubi	97.35
PRK05690	245	molybdopterin biosynthesis protein MoeB; Provision	97.34
PF00056	141	Ldh_1_N: lactate/malate dehydrogenase, NAD binding	97.32
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	97.3
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	97.27
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	97.26
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	97.25
PRK14027	283	quinate/shikimate dehydrogenase; Provisional	97.23
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	97.22
PLN02520	529	bifunctional 3-dehydroquinate dehydratase/shikimat	97.21
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	97.21
PRK15116	268	sulfur acceptor protein CsdL; Provisional	97.2
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	97.19
COG3268	382	Uncharacterized conserved protein [Function unknow	97.18
cd05291	306	HicDH_like L-2-hydroxyisocapronate dehydrogenases	97.18
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	97.14
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	97.12
PRK06849	389	hypothetical protein; Provisional	97.12
PRK13940	414	glutamyl-tRNA reductase; Provisional	97.12
cd00704	323	MDH Malate dehydrogenase. Malate dehydrogenase (MD	97.11
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	97.11
TIGR01758	324	MDH_euk_cyt malate dehydrogenase, NAD-dependent. T	97.09
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	97.08
PRK14968	188	putative methyltransferase; Provisional	97.04
PRK08223	287	hypothetical protein; Validated	97.01
TIGR02355	240	moeB molybdopterin synthase sulfurylase MoeB. This	97.0
PRK00066	315	ldh L-lactate dehydrogenase; Reviewed	96.97
cd01487	174	E1_ThiF_like E1_ThiF_like. Member of superfamily o	96.97
cd01483	143	E1_enzyme_family Superfamily of activating enzymes	96.97
PRK08328	231	hypothetical protein; Provisional	96.94
PRK12749	288	quinate/shikimate dehydrogenase; Reviewed	96.92
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	96.91
PRK05600	370	thiamine biosynthesis protein ThiF; Validated	96.91
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	96.91
cd01338	322	MDH_choloroplast_like Chloroplast-like malate dehy	96.9
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	96.9
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	96.89
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	96.86
cd05276	323	p53_inducible_oxidoreductase PIG3 p53-inducible qu	96.85
cd01492	197	Aos1_SUMO Ubiquitin activating enzyme (E1) subunit	96.85
cd01485	198	E1-1_like Ubiquitin activating enzyme (E1), repeat	96.84
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	96.83
cd01489	312	Uba2_SUMO Ubiquitin activating enzyme (E1) subunit	96.83
COG0569	225	TrkA K+ transport systems, NAD-binding component [	96.82
PRK05086	312	malate dehydrogenase; Provisional	96.82
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	96.82
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	96.8
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	96.77
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	96.76
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	96.76
PRK13982	475	bifunctional SbtC-like/phosphopantothenoylcysteine	96.75
PF12242	78	Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2	96.73
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	96.66
cd01484	234	E1-2_like Ubiquitin activating enzyme (E1), repeat	96.62
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	96.62
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	96.6
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	96.59
PRK14851	679	hypothetical protein; Provisional	96.57
PRK07411	390	hypothetical protein; Validated	96.53
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	96.51
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	96.51
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	96.45
PRK07878	392	molybdopterin biosynthesis-like protein MoeZ; Vali	96.43
cd00650	263	LDH_MDH_like NAD-dependent, lactate dehydrogenase-	96.4
cd01488	291	Uba3_RUB Ubiquitin activating enzyme (E1) subunit	96.37
COG0373	414	HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	96.36
TIGR01381	664	E1_like_apg7 E1-like protein-activating enzyme Gsa	96.36
PLN00203	519	glutamyl-tRNA reductase	96.35
TIGR02824	325	quinone_pig3 putative NAD(P)H quinone oxidoreducta	96.34
PLN02602	350	lactate dehydrogenase	96.34
PRK09310	477	aroDE bifunctional 3-dehydroquinate dehydratase/sh	96.3
PRK04308	445	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.3
KOG1197	336	consensus Predicted quinone oxidoreductase [Energy	96.3
cd05294	309	LDH-like_MDH_nadp A lactate dehydrogenases-like st	96.29
PRK01438	480	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.26
TIGR01915	219	npdG NADPH-dependent F420 reductase. This model re	96.25
PRK14852	989	hypothetical protein; Provisional	96.24
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	96.21
PRK08306	296	dipicolinate synthase subunit A; Reviewed	96.21
PRK07877	722	hypothetical protein; Provisional	96.19
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.16
PRK04148	134	hypothetical protein; Provisional	96.15
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	96.15
PRK09496	453	trkA potassium transporter peripheral membrane com	96.14
cd01486	307	Apg7 Apg7 is an E1-like protein, that activates tw	96.13
PLN02819	1042	lysine-ketoglutarate reductase/saccharopine dehydr	96.13
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	96.1
cd08268	328	MDR2 Medium chain dehydrogenases/reductase (MDR)/z	96.09
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	96.04
cd05288	329	PGDH Prostaglandin dehydrogenases. Prostaglandins	96.0
TIGR00561	511	pntA NAD(P) transhydrogenase, alpha subunit. In so	95.97
PTZ00117	319	malate dehydrogenase; Provisional	95.94
TIGR01772	312	MDH_euk_gproteo malate dehydrogenase, NAD-dependen	95.91
KOG2013	603	consensus SMT3/SUMO-activating complex, catalytic	95.87
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	95.85
PRK09496	453	trkA potassium transporter peripheral membrane com	95.72
cd00300	300	LDH_like L-lactate dehydrogenase-like enzymes. Mem	95.72
cd05290	307	LDH_3 A subgroup of L-lactate dehydrogenases. L-la	95.7
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	95.7
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	95.67
cd08244	324	MDR_enoyl_red Possible enoyl reductase. Member ide	95.63
PRK08410	311	2-hydroxyacid dehydrogenase; Provisional	95.61
cd05293	312	LDH_1 A subgroup of L-lactate dehydrogenases. L-la	95.6
cd08239	339	THR_DH_like L-threonine dehydrogenase (TDH)-like.	95.58
PRK12480	330	D-lactate dehydrogenase; Provisional	95.54
PRK08655	437	prephenate dehydrogenase; Provisional	95.51
cd01491	286	Ube1_repeat1 Ubiquitin activating enzyme (E1), rep	95.48
TIGR02818	368	adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr	95.48
cd05212	140	NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom	95.41
TIGR01470	205	cysG_Nterm siroheme synthase, N-terminal domain. T	95.4
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	95.39
PRK06487	317	glycerate dehydrogenase; Provisional	95.38
cd01337	310	MDH_glyoxysomal_mitochondrial Glyoxysomal and mito	95.33
cd08292	324	ETR_like_2 2-enoyl thioester reductase (ETR) like	95.33
PF02737	180	3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind	95.33
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	95.3
PTZ00075	476	Adenosylhomocysteinase; Provisional	95.29
cd08241	323	QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t	95.27
PRK13243	333	glyoxylate reductase; Reviewed	95.26
cd05286	320	QOR2 Quinone oxidoreductase (QOR). Quinone oxidore	95.23
COG0111	324	SerA Phosphoglycerate dehydrogenase and related de	95.22
PLN02740	381	Alcohol dehydrogenase-like	95.22
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.22
cd08250	329	Mgc45594_like Mgc45594 gene product and other MDR	95.21
PLN00112	444	malate dehydrogenase (NADP); Provisional	95.2
PRK12550	272	shikimate 5-dehydrogenase; Reviewed	95.19
PLN02494	477	adenosylhomocysteinase	95.19
cd00401	413	AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado	95.16
cd01490	435	Ube1_repeat2 Ubiquitin activating enzyme (E1), rep	95.16
PF03807	96	F420_oxidored: NADP oxidoreductase coenzyme F420-d	95.13
TIGR03201	349	dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co	95.12
cd08289	326	MDR_yhfp_like Yhfp putative quinone oxidoreductase	95.09
cd08243	320	quinone_oxidoreductase_like_1 Quinone oxidoreducta	95.09
cd08300	368	alcohol_DH_class_III class III alcohol dehydrogena	95.08
cd08238	410	sorbose_phosphate_red L-sorbose-1-phosphate reduct	95.06
cd05191	86	NAD_bind_amino_acid_DH NAD(P) binding domain of am	95.04
COG3007	398	Uncharacterized paraquat-inducible protein B [Func	95.03
cd05282	323	ETR_like 2-enoyl thioester reductase-like. 2-enoyl	95.02
PRK06223	307	malate dehydrogenase; Reviewed	94.95
PLN02968	381	Probable N-acetyl-gamma-glutamyl-phosphate reducta	94.94
PRK05442	326	malate dehydrogenase; Provisional	94.93
PF13241	103	NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_	94.92
PTZ00082	321	L-lactate dehydrogenase; Provisional	94.91
PLN02586	360	probable cinnamyl alcohol dehydrogenase	94.88
cd05311	226	NAD_bind_2_malic_enz NAD(P) binding domain of mali	94.87
COG2130	340	Putative NADP-dependent oxidoreductases [General f	94.87
PTZ00354	334	alcohol dehydrogenase; Provisional	94.86
cd08297	341	CAD3 Cinnamyl alcohol dehydrogenases (CAD). These	94.86
cd08301	369	alcohol_DH_plants Plant alcohol dehydrogenase. NAD	94.84
PRK15469	312	ghrA bifunctional glyoxylate/hydroxypyruvate reduc	94.83
TIGR00537	179	hemK_rel_arch HemK-related putative methylase. The	94.83
cd05292	308	LDH_2 A subgroup of L-lactate dehydrogenases. L-la	94.82
cd08291	324	ETR_like_1 2-enoyl thioester reductase (ETR) like	94.81
cd08231	361	MDR_TM0436_like Hypothetical enzyme TM0436 resembl	94.79
PF02882	160	THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl	94.78
PRK13403	335	ketol-acid reductoisomerase; Provisional	94.75
PLN02928	347	oxidoreductase family protein	94.73
TIGR03451	358	mycoS_dep_FDH mycothiol-dependent formaldehyde deh	94.72
cd08281	371	liver_ADH_like1 Zinc-dependent alcohol dehydrogena	94.71
PRK14967	223	putative methyltransferase; Provisional	94.63
cd08230	355	glucose_DH Glucose dehydrogenase. Glucose dehydrog	94.59
PF03808	172	Glyco_tran_WecB: Glycosyl transferase WecB/TagA/Cp	94.58
cd08246	393	crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-	94.57
cd08233	351	butanediol_DH_like (2R,3R)-2,3-butanediol dehydrog	94.55
PF10727	127	Rossmann-like: Rossmann-like domain; InterPro: IPR	94.54
PRK14194	301	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.51
PLN02178	375	cinnamyl-alcohol dehydrogenase	94.49
cd08248	350	RTN4I1 Human Reticulon 4 Interacting Protein 1. Hu	94.48
PRK05479	330	ketol-acid reductoisomerase; Provisional	94.47
TIGR01763	305	MalateDH_bact malate dehydrogenase, NAD-dependent.	94.45
PF00107	130	ADH_zinc_N: Zinc-binding dehydrogenase; InterPro:	94.42
PF00670	162	AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase	94.41
KOG0023	360	consensus Alcohol dehydrogenase, class V [Secondar	94.41

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=3.1e-44  Score=325.55  Aligned_cols=307  Identities=48%  Similarity=0.671  Sum_probs=268.1

Q ss_pred             HHHHHhhcCCCCCCCC--CccccccCCCCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhh
Q 019722            5 VKYLLGSAGASGYGSK--STAEQVTDGCPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASD   82 (336)
Q Consensus         5 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~   82 (336)
                      ..+.....+..+++..  .+....+. ..+++|++++||||++|||+++|++|+++|++|++.+|+.++.++..+.++..
T Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~   82 (314)
T KOG1208|consen    4 LAFTVGSKGISGFKKRQTTTALEVTH-GIDLSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKG   82 (314)
T ss_pred             hHHHHhHHhhhhhhheeeeecceeec-cccCCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhc
Confidence            3455556666666666  66666666 78899999999999999999999999999999999999999999999999987


Q ss_pred             CCCCceEEEeccCCCHHHHHHHHHHHHhcCCCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhh
Q 019722           83 CPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETA  162 (336)
Q Consensus        83 ~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~  162 (336)
                      .+..++.++++|+++..+|+++++++.+.++++|++|||||++..+...+.|++|.+|++|++|+|.|++.++|.|+++.
T Consensus        83 ~~~~~i~~~~lDLssl~SV~~fa~~~~~~~~~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~  162 (314)
T KOG1208|consen   83 KANQKIRVIQLDLSSLKSVRKFAEEFKKKEGPLDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRSA  162 (314)
T ss_pred             CCCCceEEEECCCCCHHHHHHHHHHHHhcCCCccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhCC
Confidence            77889999999999999999999999999999999999999999888889999999999999999999999999999875


Q ss_pred             ccCCCCCeEEEEcCCccccccCCcccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCcee
Q 019722          163 KATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVR  242 (336)
Q Consensus       163 ~~~~~~grIV~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~  242 (336)
                           ++|||++||..+    .....+++...+....+....+|+.||.++..+++.+++.+.. |  |.+++++||.|.
T Consensus       163 -----~~RIV~vsS~~~----~~~~~~~~l~~~~~~~~~~~~~Y~~SKla~~l~~~eL~k~l~~-~--V~~~~~hPG~v~  230 (314)
T KOG1208|consen  163 -----PSRIVNVSSILG----GGKIDLKDLSGEKAKLYSSDAAYALSKLANVLLANELAKRLKK-G--VTTYSVHPGVVK  230 (314)
T ss_pred             -----CCCEEEEcCccc----cCccchhhccchhccCccchhHHHHhHHHHHHHHHHHHHHhhc-C--ceEEEECCCccc
Confidence                 489999999887    1223344444333333556668999999999999999999987 6  999999999999


Q ss_pred             CC-CCCccchhHHHHHHHHHHhhcCChHHHHHHHHHHHhcCccccCCceeeccCcccccccCCCCHHHHHHHHHHHHHhh
Q 019722          243 TR-LTREREGFITDLVFFLTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWTSKLGSNSNEASRLWAASELLV  321 (336)
Q Consensus       243 T~-~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~  321 (336)
                      |+ +.+ .......+...+...+..+++++|++.++++.+|+...++|.|+.++......+...|.+.++++|+..++++
T Consensus       231 t~~l~r-~~~~~~~l~~~l~~~~~ks~~~ga~t~~~~a~~p~~~~~sg~y~~d~~~~~~~~~a~d~~~~~~lw~~s~~l~  309 (314)
T KOG1208|consen  231 TTGLSR-VNLLLRLLAKKLSWPLTKSPEQGAATTCYAALSPELEGVSGKYFEDCAIAEPSEEALDEELAEKLWKFSEELI  309 (314)
T ss_pred             ccceec-chHHHHHHHHHHHHHhccCHHHHhhheehhccCccccCccccccccccccccccccCCHHHHHHHHHHHHHHh
Confidence            99 655 5556666777777888889999999999999999999999999999999888889999999999999999988


Q ss_pred             ccCC
Q 019722          322 SRDP  325 (336)
Q Consensus       322 ~~~~  325 (336)
                      +...
T Consensus       310 ~~~~  313 (314)
T KOG1208|consen  310 DEQL  313 (314)
T ss_pred             hhcc
Confidence            7653

>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]

Probab=100.00  E-value=2.6e-43  Score=286.87  Aligned_cols=241  Identities=25%  Similarity=0.284  Sum_probs=216.3

Q ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhc
Q 019722           32 NLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSL  111 (336)
Q Consensus        32 ~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  111 (336)
                      .+..|+++||||++|||+++++.|+++|++|++.+++...+++.+..|...   .+...+.||+++..+++..+++..+.
T Consensus        11 r~~sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~---~~h~aF~~DVS~a~~v~~~l~e~~k~   87 (256)
T KOG1200|consen   11 RLMSKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGY---GDHSAFSCDVSKAHDVQNTLEEMEKS   87 (256)
T ss_pred             HHhcceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCC---CccceeeeccCcHHHHHHHHHHHHHh
Confidence            367799999999999999999999999999999999999888888776432   47788999999999999999999999


Q ss_pred             CCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcccc
Q 019722          112 NLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRY  189 (336)
Q Consensus       112 ~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~  189 (336)
                      ++.+++||||||+....  ..+..++|++.+++|+.|.|+++|++...|...+   +.+.+|||+||..+..+       
T Consensus        88 ~g~psvlVncAGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~---~~~~sIiNvsSIVGkiG-------  157 (256)
T KOG1200|consen   88 LGTPSVLVNCAGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQ---QQGLSIINVSSIVGKIG-------  157 (256)
T ss_pred             cCCCcEEEEcCccccccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhc---CCCceEEeehhhhcccc-------
Confidence            99999999999987654  5678899999999999999999999999976543   22569999999999887       


Q ss_pred             cccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccch-hHHHHHHHHHHhhcCCh
Q 019722          190 LGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREG-FITDLVFFLTSKLLKTI  268 (336)
Q Consensus       190 ~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~-~~~~~~~~~~~~~~~~~  268 (336)
                                .-++..|+++|.++.+|+++.++|++.++  ||||.|+||++.|||.+.+++ ...+....++..+++.+
T Consensus       158 ----------N~GQtnYAAsK~GvIgftktaArEla~kn--IrvN~VlPGFI~tpMT~~mp~~v~~ki~~~iPmgr~G~~  225 (256)
T KOG1200|consen  158 ----------NFGQTNYAASKGGVIGFTKTAARELARKN--IRVNVVLPGFIATPMTEAMPPKVLDKILGMIPMGRLGEA  225 (256)
T ss_pred             ----------cccchhhhhhcCceeeeeHHHHHHHhhcC--ceEeEeccccccChhhhhcCHHHHHHHHccCCccccCCH
Confidence                      66788899999999999999999999988  999999999999999999864 56667778889999999


Q ss_pred             HHHHHHHHHHHhcCccccCCceeeccCccc
Q 019722          269 PQGAATTCYVAIHPRLVNVSGKYFADCNEA  298 (336)
Q Consensus       269 ~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  298 (336)
                      ||+|..++||++ +.++|+||+.+.++|+.
T Consensus       226 EevA~~V~fLAS-~~ssYiTG~t~evtGGl  254 (256)
T KOG1200|consen  226 EEVANLVLFLAS-DASSYITGTTLEVTGGL  254 (256)
T ss_pred             HHHHHHHHHHhc-cccccccceeEEEeccc
Confidence            999999999995 99999999999998863

>PRK05854 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-40  Score=306.04  Aligned_cols=280  Identities=33%  Similarity=0.461  Sum_probs=225.1

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      +++++||+++||||++|||++++++|+++|++|++++|+.++.++..+++....++.++.++++|+++.++++++++++.
T Consensus         9 ~~~l~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~   88 (313)
T PRK05854          9 VPDLSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLR   88 (313)
T ss_pred             CcccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHH
Confidence            67899999999999999999999999999999999999999999888888877666789999999999999999999999


Q ss_pred             hcCCCccEEEEcccCCCCC-CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccc
Q 019722          110 SLNLPLNLLINNAGKFAHQ-HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIR  188 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~~~-~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~  188 (336)
                      +.++++|+||||||+.... .+.+.++++.++++|+.|++.+++.++|.|++.      .+|||++||.++..+.   ..
T Consensus        89 ~~~~~iD~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~------~~riv~vsS~~~~~~~---~~  159 (313)
T PRK05854         89 AEGRPIHLLINNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLLPLLRAG------RARVTSQSSIAARRGA---IN  159 (313)
T ss_pred             HhCCCccEEEECCccccCCccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhC------CCCeEEEechhhcCCC---cC
Confidence            9899999999999987544 356789999999999999999999999999764      3799999998776542   12


Q ss_pred             ccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccch-------hHHHHHHHHH
Q 019722          189 YLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREG-------FITDLVFFLT  261 (336)
Q Consensus       189 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~-------~~~~~~~~~~  261 (336)
                      +++...  ...+++...|+.||+++..|++.+++++...+.+|+||+|+||+|.|++.+....       ........+.
T Consensus       160 ~~~~~~--~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~  237 (313)
T PRK05854        160 WDDLNW--ERSYAGMRAYSQSKIAVGLFALELDRRSRAAGWGITSNLAHPGVAPTNLLAARPEVGRDKDTLMVRLIRSLS  237 (313)
T ss_pred             cccccc--cccCcchhhhHHHHHHHHHHHHHHHHHhhcCCCCeEEEEEecceeccCccccccccccchhHHHHHHHHHHh
Confidence            222211  1225677899999999999999999876433345999999999999998754211       1111111111


Q ss_pred             --HhhcCChHHHHHHHHHHHhcCccccCCceeeccCccc---------ccccCCCCHHHHHHHHHHHHHhhc
Q 019722          262 --SKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEA---------WTSKLGSNSNEASRLWAASELLVS  322 (336)
Q Consensus       262 --~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~---------~~~~~~~~~~~~~~~w~~~~~~~~  322 (336)
                        .....++++++...++++.++...  +|.||..++..         .......|.+.++++|++++++++
T Consensus       238 ~~~~~~~~~~~ga~~~l~~a~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~lw~~s~~~~~  307 (313)
T PRK05854        238 ARGFLVGTVESAILPALYAATSPDAE--GGAFYGPRGPGELGGGPVEQALYPPLRRNAEAARLWEVSEQLTG  307 (313)
T ss_pred             hcccccCCHHHHHHHhhheeeCCCCC--CCcEECCCcccccCCCcccCCCCcccCCHHHHHHHHHHHHHHHC
Confidence              113568899999999999877654  69999877532         223345789999999999999997

>PRK08303 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.8e-42  Score=313.72  Aligned_cols=270  Identities=19%  Similarity=0.202  Sum_probs=217.5

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCCh----------HHHHHHHHHHHhhCCCCceEEEeccCCCHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSL----------KAAEEAKARLASDCPGSDIVVLPLDLSSLS   99 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~----------~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~   99 (336)
                      +.+|+||++|||||++|||+++|++|+++|++|++++|+.          +.+++..+++...  +.++.++++|+++++
T Consensus         3 ~~~l~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~Dv~~~~   80 (305)
T PRK08303          3 MKPLRGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAA--GGRGIAVQVDHLVPE   80 (305)
T ss_pred             CcCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhc--CCceEEEEcCCCCHH
Confidence            5678999999999999999999999999999999999984          3455555555443  457889999999999


Q ss_pred             HHHHHHHHHHhcCCCccEEEEcc-cCC------CCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEE
Q 019722          100 SVRNFVSQFHSLNLPLNLLINNA-GKF------AHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIV  172 (336)
Q Consensus       100 ~v~~~~~~~~~~~~~id~lv~nA-g~~------~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV  172 (336)
                      +++++++++.+.+++||+||||| |..      .+..+.+.++|++++++|+.+++.++++++|.|.+++     +|+||
T Consensus        81 ~v~~~~~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~-----~g~IV  155 (305)
T PRK08303         81 QVRALVERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRP-----GGLVV  155 (305)
T ss_pred             HHHHHHHHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCC-----CcEEE
Confidence            99999999999999999999999 742      1224567788999999999999999999999998754     48999


Q ss_pred             EEcCCccccccCCcccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccc--
Q 019722          173 NVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRERE--  250 (336)
Q Consensus       173 ~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~--  250 (336)
                      ++||..+.....              ..+....|++||+++.+|+++|+.|+++.|  ||||+|+||+++|++.....  
T Consensus       156 ~isS~~~~~~~~--------------~~~~~~~Y~asKaal~~lt~~La~el~~~g--IrVn~v~PG~v~T~~~~~~~~~  219 (305)
T PRK08303        156 EITDGTAEYNAT--------------HYRLSVFYDLAKTSVNRLAFSLAHELAPHG--ATAVALTPGWLRSEMMLDAFGV  219 (305)
T ss_pred             EECCccccccCc--------------CCCCcchhHHHHHHHHHHHHHHHHHhhhcC--cEEEEecCCccccHHHHHhhcc
Confidence            999976543210              023456799999999999999999999988  99999999999999853211  


Q ss_pred             --hhHHHHHHHHH-HhhcCChHHHHHHHHHHHhcCccccCCceeeccCcccccccCCCCHHHHHHHHHHHHHhhc
Q 019722          251 --GFITDLVFFLT-SKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWTSKLGSNSNEASRLWAASELLVS  322 (336)
Q Consensus       251 --~~~~~~~~~~~-~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~  322 (336)
                        ..........+ ..+..+|++++..++|+++.+...+++|+++..+..........+++..+++|++++++-.
T Consensus       220 ~~~~~~~~~~~~p~~~~~~~peevA~~v~fL~s~~~~~~itG~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  294 (305)
T PRK08303        220 TEENWRDALAKEPHFAISETPRYVGRAVAALAADPDVARWNGQSLSSGQLARVYGFTDLDGSRPDAWRYLVEVQD  294 (305)
T ss_pred             CccchhhhhccccccccCCCHHHHHHHHHHHHcCcchhhcCCcEEEhHHHHHhcCccCCCCCCCcchhhhhhccc
Confidence              11111111122 2344689999999999998555568999999888888888888888999999999987643

>PRK08339 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.8e-41  Score=302.47  Aligned_cols=244  Identities=19%  Similarity=0.191  Sum_probs=205.9

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      .++|+||++|||||++|||++++++|+++|++|++++|+.+++++..++++... +.++.++++|++++++++++++++.
T Consensus         3 ~~~l~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~i~~~~~~~~   81 (263)
T PRK08339          3 KIDLSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSES-NVDVSYIVADLTKREDLERTVKELK   81 (263)
T ss_pred             ccCCCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhc-CCceEEEEecCCCHHHHHHHHHHHH
Confidence            356899999999999999999999999999999999999988888877776543 4578999999999999999999986


Q ss_pred             hcCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcc
Q 019722          110 SLNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMI  187 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~  187 (336)
                       .++++|++|||||.....  .+.+.++|++++++|+.+++.++++++|.|++++     .|+||++||.++..+     
T Consensus        82 -~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~-----~g~Ii~isS~~~~~~-----  150 (263)
T PRK08339         82 -NIGEPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKG-----FGRIIYSTSVAIKEP-----  150 (263)
T ss_pred             -hhCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-----CCEEEEEcCccccCC-----
Confidence             489999999999975432  5678899999999999999999999999998764     489999999887654     


Q ss_pred             cccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccc------------hhHHH
Q 019722          188 RYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRERE------------GFITD  255 (336)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~------------~~~~~  255 (336)
                                  .+.+..|+++|+++++|+++++.|+++.|  ||||+|+||+|+|++.....            .....
T Consensus       151 ------------~~~~~~y~asKaal~~l~~~la~el~~~g--IrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~  216 (263)
T PRK08339        151 ------------IPNIALSNVVRISMAGLVRTLAKELGPKG--ITVNGIMPGIIRTDRVIQLAQDRAKREGKSVEEALQE  216 (263)
T ss_pred             ------------CCcchhhHHHHHHHHHHHHHHHHHhcccC--eEEEEEEeCcCccHHHHHHHHhhhhccCCCHHHHHHH
Confidence                        56677899999999999999999999988  99999999999999864321            11111


Q ss_pred             HHHHHHHhhcCChHHHHHHHHHHHhcCccccCCceeeccCccccc
Q 019722          256 LVFFLTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWT  300 (336)
Q Consensus       256 ~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~  300 (336)
                      .....+..+...|+|++..++|+++ +.+.+++|+.+..+|+...
T Consensus       217 ~~~~~p~~r~~~p~dva~~v~fL~s-~~~~~itG~~~~vdgG~~~  260 (263)
T PRK08339        217 YAKPIPLGRLGEPEEIGYLVAFLAS-DLGSYINGAMIPVDGGRLN  260 (263)
T ss_pred             HhccCCcccCcCHHHHHHHHHHHhc-chhcCccCceEEECCCccc
Confidence            1222344566789999999999987 7778999999998887543

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=100.00  E-value=3.2e-40  Score=281.32  Aligned_cols=231  Identities=26%  Similarity=0.312  Sum_probs=201.3

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      |..+++|+++|||||||||.++|++|++.|++|++++|+.++++++.+++.+    ..+.++..|++|.++++.+++.+.
T Consensus         1 m~~~~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~----~~~~~~~~DVtD~~~~~~~i~~~~   76 (246)
T COG4221           1 MTTLKGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGA----GAALALALDVTDRAAVEAAIEALP   76 (246)
T ss_pred             CCCCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhcc----CceEEEeeccCCHHHHHHHHHHHH
Confidence            3457889999999999999999999999999999999999999999988743    589999999999999999999999


Q ss_pred             hcCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcc
Q 019722          110 SLNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMI  187 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~  187 (336)
                      +.++++|+||||||.....  .+.+.++|+.++++|+.|.++.+++++|.|.+++     .|.|||+||.++.++     
T Consensus        77 ~~~g~iDiLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~-----~G~IiN~~SiAG~~~-----  146 (246)
T COG4221          77 EEFGRIDILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERK-----SGHIINLGSIAGRYP-----  146 (246)
T ss_pred             HhhCcccEEEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcC-----CceEEEecccccccc-----
Confidence            9999999999999976554  6788999999999999999999999999999987     589999999999988     


Q ss_pred             cccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchh-HHHHHHH-HHHhhc
Q 019722          188 RYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGF-ITDLVFF-LTSKLL  265 (336)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~-~~~~~~~-~~~~~~  265 (336)
                                  +++...|+++|+++..|+..|+.|+...+  |||..|+||.|.|..+...... ....... ......
T Consensus       147 ------------y~~~~vY~ATK~aV~~fs~~LR~e~~g~~--IRVt~I~PG~v~~~~~s~v~~~g~~~~~~~~y~~~~~  212 (246)
T COG4221         147 ------------YPGGAVYGATKAAVRAFSLGLRQELAGTG--IRVTVISPGLVETTEFSTVRFEGDDERADKVYKGGTA  212 (246)
T ss_pred             ------------CCCCccchhhHHHHHHHHHHHHHHhcCCC--eeEEEecCceecceecccccCCchhhhHHHHhccCCC
Confidence                        88899999999999999999999999777  9999999999977765554321 2222222 234456


Q ss_pred             CChHHHHHHHHHHHhcCccccCC
Q 019722          266 KTIPQGAATTCYVAIHPRLVNVS  288 (336)
Q Consensus       266 ~~~~~~a~~~~~l~~~~~~~~~~  288 (336)
                      ..|+++|.++.|.+..|..--++
T Consensus       213 l~p~dIA~~V~~~~~~P~~vnI~  235 (246)
T COG4221         213 LTPEDIAEAVLFAATQPQHVNIN  235 (246)
T ss_pred             CCHHHHHHHHHHHHhCCCccccc
Confidence            78999999999999988654333

>PRK06197 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.2e-39  Score=294.87  Aligned_cols=283  Identities=35%  Similarity=0.509  Sum_probs=225.5

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      +++++||++|||||++|||++++++|+++|++|++++|+.++.++..+++....++.++.++++|+++.++++++++++.
T Consensus        11 ~~~~~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~   90 (306)
T PRK06197         11 IPDQSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALR   90 (306)
T ss_pred             cccCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHH
Confidence            67899999999999999999999999999999999999998888877777765555678999999999999999999999


Q ss_pred             hcCCCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcccc
Q 019722          110 SLNLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRY  189 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~  189 (336)
                      +.++++|+||||||........+.++++.++++|+.|++.+++.++|.|++.+     .++||++||.++....  ..++
T Consensus        91 ~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~-----~~~iV~vSS~~~~~~~--~~~~  163 (306)
T PRK06197         91 AAYPRIDLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLLPVP-----GSRVVTVSSGGHRIRA--AIHF  163 (306)
T ss_pred             hhCCCCCEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCC-----CCEEEEECCHHHhccC--CCCc
Confidence            98999999999999876555667789999999999999999999999998754     4799999998654311  1112


Q ss_pred             cccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHHHHHHHHhhcCChH
Q 019722          190 LGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSKLLKTIP  269 (336)
Q Consensus       190 ~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~  269 (336)
                      ++...  ...+++...|+.||++++.+++.+++++...+..|.+++++||+|.|++.+...................+++
T Consensus       164 ~~~~~--~~~~~~~~~Y~~SK~a~~~~~~~la~~l~~~~i~v~~v~~~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (306)
T PRK06197        164 DDLQW--ERRYNRVAAYGQSKLANLLFTYELQRRLAAAGATTIAVAAHPGVSNTELARNLPRALRPVATVLAPLLAQSPE  241 (306)
T ss_pred             cccCc--ccCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCeEEEEeCCCcccCcccccCcHHHHHHHHHHHhhhcCCHH
Confidence            22111  1124567789999999999999999999887733444556799999999887654333333333333456788


Q ss_pred             HHHHHHHHHHhcCccccCCceeeccCccc---------ccccCCCCHHHHHHHHHHHHHhhcc
Q 019722          270 QGAATTCYVAIHPRLVNVSGKYFADCNEA---------WTSKLGSNSNEASRLWAASELLVSR  323 (336)
Q Consensus       270 ~~a~~~~~l~~~~~~~~~~G~~~~~~~~~---------~~~~~~~~~~~~~~~w~~~~~~~~~  323 (336)
                      +++...++++..+  ...+|.++..++..         ..++...|.+.++++|+.++++++.
T Consensus       242 ~g~~~~~~~~~~~--~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lw~~~~~~~~~  302 (306)
T PRK06197        242 MGALPTLRAATDP--AVRGGQYYGPDGFGEQRGYPKVVASSAQSHDEDLQRRLWAVSEELTGV  302 (306)
T ss_pred             HHHHHHHHHhcCC--CcCCCeEEccCcccccCCCCccCCCccccCCHHHHHHHHHHHHHHHCC
Confidence            8888888888754  34589999877643         2334567899999999999999984

>PRK05867 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.9e-40  Score=293.52  Aligned_cols=245  Identities=23%  Similarity=0.256  Sum_probs=206.6

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      +++++||++|||||++|||++++++|+++|++|++++|+.+++++..++++..  +.++.++++|+++++++.++++++.
T Consensus         4 ~~~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~   81 (253)
T PRK05867          4 LFDLHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTS--GGKVVPVCCDVSQHQQVTSMLDQVT   81 (253)
T ss_pred             cccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc--CCeEEEEEccCCCHHHHHHHHHHHH
Confidence            45789999999999999999999999999999999999998888888877654  4578899999999999999999999


Q ss_pred             hcCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcc
Q 019722          110 SLNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMI  187 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~  187 (336)
                      +.++++|+||||||.....  .+.+.++|++++++|+.+++.+++++.|.|.+++.    +++||++||..+.....   
T Consensus        82 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~----~g~iv~~sS~~~~~~~~---  154 (253)
T PRK05867         82 AELGGIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQ----GGVIINTASMSGHIINV---  154 (253)
T ss_pred             HHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCC----CcEEEEECcHHhcCCCC---
Confidence            9999999999999976433  56678899999999999999999999999977532    47899999987653210   


Q ss_pred             cccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHHHHHHHHhhcCC
Q 019722          188 RYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSKLLKT  267 (336)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~  267 (336)
                                  ......|+++|++++++++++++|+.+.|  |+||+|+||+|+|++...............+..+..+
T Consensus       155 ------------~~~~~~Y~asKaal~~~~~~la~e~~~~g--I~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~r~~~  220 (253)
T PRK05867        155 ------------PQQVSHYCASKAAVIHLTKAMAVELAPHK--IRVNSVSPGYILTELVEPYTEYQPLWEPKIPLGRLGR  220 (253)
T ss_pred             ------------CCCccchHHHHHHHHHHHHHHHHHHhHhC--eEEEEeecCCCCCcccccchHHHHHHHhcCCCCCCcC
Confidence                        12346799999999999999999999988  9999999999999997654332222222334456788


Q ss_pred             hHHHHHHHHHHHhcCccccCCceeeccCccc
Q 019722          268 IPQGAATTCYVAIHPRLVNVSGKYFADCNEA  298 (336)
Q Consensus       268 ~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  298 (336)
                      |+|++.+++|+++ +...+++|+.+..+|+.
T Consensus       221 p~~va~~~~~L~s-~~~~~~tG~~i~vdgG~  250 (253)
T PRK05867        221 PEELAGLYLYLAS-EASSYMTGSDIVIDGGY  250 (253)
T ss_pred             HHHHHHHHHHHcC-cccCCcCCCeEEECCCc
Confidence            9999999999987 77899999999999874

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=3.7e-40  Score=294.29  Aligned_cols=236  Identities=14%  Similarity=0.128  Sum_probs=197.4

Q ss_pred             CCCCCCEEEEeCCC--ChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHH
Q 019722           31 PNLSSVTAIITGAT--SGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQF  108 (336)
Q Consensus        31 ~~l~gk~~lItGgs--~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~  108 (336)
                      +.++||++|||||+  +|||++++++|+++|++|++++|+. +..+..+++.    +.++.++++|++++++++++++++
T Consensus         3 ~~l~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~-~~~~~~~~~~----~~~~~~~~~Dl~~~~~v~~~~~~~   77 (252)
T PRK06079          3 GILSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQND-RMKKSLQKLV----DEEDLLVECDVASDESIERAFATI   77 (252)
T ss_pred             cccCCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCch-HHHHHHHhhc----cCceeEEeCCCCCHHHHHHHHHHH
Confidence            34789999999999  7999999999999999999999983 4444444432    246889999999999999999999


Q ss_pred             HhcCCCccEEEEcccCCCC------CCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccc
Q 019722          109 HSLNLPLNLLINNAGKFAH------QHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWF  182 (336)
Q Consensus       109 ~~~~~~id~lv~nAg~~~~------~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~  182 (336)
                      .+.++++|+||||||+...      ..+.+.++|++.+++|+.+++.++++++|+|.+       +|+||++||.++..+
T Consensus        78 ~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~-------~g~Iv~iss~~~~~~  150 (252)
T PRK06079         78 KERVGKIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNP-------GASIVTLTYFGSERA  150 (252)
T ss_pred             HHHhCCCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhccc-------CceEEEEeccCcccc
Confidence            9989999999999997542      256788999999999999999999999999954       379999999877654


Q ss_pred             cCCcccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccch---hHHHHHHH
Q 019722          183 SGDMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREG---FITDLVFF  259 (336)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~---~~~~~~~~  259 (336)
                                       .+.+..|++||+++++|+++++.|+++.|  ||||+|+||+|+|++......   ........
T Consensus       151 -----------------~~~~~~Y~asKaal~~l~~~la~el~~~g--I~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~  211 (252)
T PRK06079        151 -----------------IPNYNVMGIAKAALESSVRYLARDLGKKG--IRVNAISAGAVKTLAVTGIKGHKDLLKESDSR  211 (252)
T ss_pred             -----------------CCcchhhHHHHHHHHHHHHHHHHHhhhcC--cEEEEEecCcccccccccCCChHHHHHHHHhc
Confidence                             56677899999999999999999999988  999999999999998654321   11122222


Q ss_pred             HHHhhcCChHHHHHHHHHHHhcCccccCCceeeccCccc
Q 019722          260 LTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEA  298 (336)
Q Consensus       260 ~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  298 (336)
                      .+..+..+|+|++.+++|+++ +.+.+++|+.+..+|+.
T Consensus       212 ~p~~r~~~pedva~~~~~l~s-~~~~~itG~~i~vdgg~  249 (252)
T PRK06079        212 TVDGVGVTIEEVGNTAAFLLS-DLSTGVTGDIIYVDKGV  249 (252)
T ss_pred             CcccCCCCHHHHHHHHHHHhC-cccccccccEEEeCCce
Confidence            344567899999999999997 77889999999888874

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=7.5e-40  Score=295.61  Aligned_cols=240  Identities=15%  Similarity=0.138  Sum_probs=196.8

Q ss_pred             CCCCCCEEEEeCCC--ChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHH
Q 019722           31 PNLSSVTAIITGAT--SGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQF  108 (336)
Q Consensus        31 ~~l~gk~~lItGgs--~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~  108 (336)
                      |.|+||++|||||+  +|||+++|++|+++|++|++++|+.. ..+..+++..+. +.. .++++|++|+++++++++++
T Consensus         1 ~~l~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~-~~~~~~~~~~~~-~~~-~~~~~Dv~d~~~v~~~~~~i   77 (274)
T PRK08415          1 MIMKGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEA-LKKRVEPIAQEL-GSD-YVYELDVSKPEHFKSLAESL   77 (274)
T ss_pred             CccCCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHH-HHHHHHHHHHhc-CCc-eEEEecCCCHHHHHHHHHHH
Confidence            45789999999997  79999999999999999999999853 233344443332 223 67899999999999999999


Q ss_pred             HhcCCCccEEEEcccCCCC------CCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccc
Q 019722          109 HSLNLPLNLLINNAGKFAH------QHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWF  182 (336)
Q Consensus       109 ~~~~~~id~lv~nAg~~~~------~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~  182 (336)
                      .+.++++|+||||||+...      ..+.+.++|++++++|+.+++.++++++|.|.+       +|+||++||.++..+
T Consensus        78 ~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~-------~g~Iv~isS~~~~~~  150 (274)
T PRK08415         78 KKDLGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLND-------GASVLTLSYLGGVKY  150 (274)
T ss_pred             HHHcCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhcc-------CCcEEEEecCCCccC
Confidence            9999999999999997532      256788999999999999999999999999965       379999999876654


Q ss_pred             cCCcccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhH--HHH-HHH
Q 019722          183 SGDMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFI--TDL-VFF  259 (336)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~--~~~-~~~  259 (336)
                                       .+.+..|++||+++.+|+++++.|+++.|  ||||+|+||+|+|++........  ... ...
T Consensus       151 -----------------~~~~~~Y~asKaal~~l~~~la~el~~~g--IrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~  211 (274)
T PRK08415        151 -----------------VPHYNVMGVAKAALESSVRYLAVDLGKKG--IRVNAISAGPIKTLAASGIGDFRMILKWNEIN  211 (274)
T ss_pred             -----------------CCcchhhhhHHHHHHHHHHHHHHHhhhcC--eEEEEEecCccccHHHhccchhhHHhhhhhhh
Confidence                             56677899999999999999999999888  99999999999998765432211  011 112


Q ss_pred             HHHhhcCChHHHHHHHHHHHhcCccccCCceeeccCccccc
Q 019722          260 LTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWT  300 (336)
Q Consensus       260 ~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~  300 (336)
                      .+..+...|+|++..++|+++ +.+.+++|+.+..+|+...
T Consensus       212 ~pl~r~~~pedva~~v~fL~s-~~~~~itG~~i~vdGG~~~  251 (274)
T PRK08415        212 APLKKNVSIEEVGNSGMYLLS-DLSSGVTGEIHYVDAGYNI  251 (274)
T ss_pred             CchhccCCHHHHHHHHHHHhh-hhhhcccccEEEEcCcccc
Confidence            344567889999999999998 6678999999999987543

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=6.9e-40  Score=295.48  Aligned_cols=238  Identities=17%  Similarity=0.150  Sum_probs=195.5

Q ss_pred             CCCCEEEEeCCCC--hHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHh
Q 019722           33 LSSVTAIITGATS--GIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHS  110 (336)
Q Consensus        33 l~gk~~lItGgs~--gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  110 (336)
                      |+||++|||||++  |||+++|++|+++|++|++++|+....+. .+++.... + ...++++|++|+++++++++++.+
T Consensus         5 l~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~-~~~~~~~~-g-~~~~~~~Dv~d~~~v~~~~~~~~~   81 (271)
T PRK06505          5 MQGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKR-VKPLAESL-G-SDFVLPCDVEDIASVDAVFEALEK   81 (271)
T ss_pred             cCCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHH-HHHHHHhc-C-CceEEeCCCCCHHHHHHHHHHHHH
Confidence            7899999999997  99999999999999999999998643333 34443332 2 235789999999999999999999


Q ss_pred             cCCCccEEEEcccCCCC------CCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccC
Q 019722          111 LNLPLNLLINNAGKFAH------QHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSG  184 (336)
Q Consensus       111 ~~~~id~lv~nAg~~~~------~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~  184 (336)
                      .++++|+||||||+...      ..+.+.++|++++++|+.+++.++|+++|+|.+       +|+||++||.++..+  
T Consensus        82 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~-------~G~Iv~isS~~~~~~--  152 (271)
T PRK06505         82 KWGKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPD-------GGSMLTLTYGGSTRV--  152 (271)
T ss_pred             HhCCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhcc-------CceEEEEcCCCcccc--
Confidence            99999999999997642      246788999999999999999999999999963       379999999877654  


Q ss_pred             CcccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchh---HHHHHHHHH
Q 019722          185 DMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGF---ITDLVFFLT  261 (336)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~---~~~~~~~~~  261 (336)
                                     .+.+..|++||+++.+|+++++.|+++.|  ||||+|+||+++|++.......   ........+
T Consensus       153 ---------------~~~~~~Y~asKaAl~~l~r~la~el~~~g--IrVn~v~PG~i~T~~~~~~~~~~~~~~~~~~~~p  215 (271)
T PRK06505        153 ---------------MPNYNVMGVAKAALEASVRYLAADYGPQG--IRVNAISAGPVRTLAGAGIGDARAIFSYQQRNSP  215 (271)
T ss_pred             ---------------CCccchhhhhHHHHHHHHHHHHHHHhhcC--eEEEEEecCCccccccccCcchHHHHHHHhhcCC
Confidence                           56677899999999999999999999988  9999999999999986543211   111111223


Q ss_pred             HhhcCChHHHHHHHHHHHhcCccccCCceeeccCccccc
Q 019722          262 SKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWT  300 (336)
Q Consensus       262 ~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~  300 (336)
                      ..+...|+|++..++|+++ +.+.+++|+.+..+|+...
T Consensus       216 ~~r~~~peeva~~~~fL~s-~~~~~itG~~i~vdgG~~~  253 (271)
T PRK06505        216 LRRTVTIDEVGGSALYLLS-DLSSGVTGEIHFVDSGYNI  253 (271)
T ss_pred             ccccCCHHHHHHHHHHHhC-ccccccCceEEeecCCccc
Confidence            4456799999999999987 7778999999999987543

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=100.00  E-value=7.8e-40  Score=291.99  Aligned_cols=241  Identities=24%  Similarity=0.253  Sum_probs=200.7

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      +++++||++|||||++|||++++++|+++|++|++++|+..  ++..++++..  +.++.++++|++++++++++++++.
T Consensus         3 ~~~l~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~--~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~   78 (251)
T PRK12481          3 LFDLNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEA--PETQAQVEAL--GRKFHFITADLIQQKDIDSIVSQAV   78 (251)
T ss_pred             CcccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchH--HHHHHHHHHc--CCeEEEEEeCCCCHHHHHHHHHHHH
Confidence            45789999999999999999999999999999999998743  3333444333  5678999999999999999999999


Q ss_pred             hcCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcc
Q 019722          110 SLNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMI  187 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~  187 (336)
                      +.++++|++|||||+....  .+.+.++|++++++|+.+++.++++++|.|.+++.    +|+||++||..+..+     
T Consensus        79 ~~~g~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~----~g~ii~isS~~~~~~-----  149 (251)
T PRK12481         79 EVMGHIDILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGN----GGKIINIASMLSFQG-----  149 (251)
T ss_pred             HHcCCCCEEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCC----CCEEEEeCChhhcCC-----
Confidence            9999999999999976543  56778999999999999999999999999976531    479999999877654     


Q ss_pred             cccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccch---hHHHHHHHHHHhh
Q 019722          188 RYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREG---FITDLVFFLTSKL  264 (336)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~---~~~~~~~~~~~~~  264 (336)
                                  .+....|++||+++++|+++++.|+++.|  ||||+|+||++.|++......   .........+..+
T Consensus       150 ------------~~~~~~Y~asK~a~~~l~~~la~e~~~~g--irvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~~  215 (251)
T PRK12481        150 ------------GIRVPSYTASKSAVMGLTRALATELSQYN--INVNAIAPGYMATDNTAALRADTARNEAILERIPASR  215 (251)
T ss_pred             ------------CCCCcchHHHHHHHHHHHHHHHHHHhhcC--eEEEEEecCCCccCchhhcccChHHHHHHHhcCCCCC
Confidence                        44556899999999999999999999888  999999999999998765321   1112222334456


Q ss_pred             cCChHHHHHHHHHHHhcCccccCCceeeccCccc
Q 019722          265 LKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEA  298 (336)
Q Consensus       265 ~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  298 (336)
                      ..+|+|++.+++|+++ +.+.+++|+.+..+|+.
T Consensus       216 ~~~peeva~~~~~L~s-~~~~~~~G~~i~vdgg~  248 (251)
T PRK12481        216 WGTPDDLAGPAIFLSS-SASDYVTGYTLAVDGGW  248 (251)
T ss_pred             CcCHHHHHHHHHHHhC-ccccCcCCceEEECCCE
Confidence            6789999999999997 77789999999988873

>PRK07063 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-39  Score=291.74  Aligned_cols=244  Identities=25%  Similarity=0.326  Sum_probs=207.7

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHh
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHS  110 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  110 (336)
                      .++++|++|||||++|||++++++|+++|++|++++|+.+.+++..++++....+.++.++++|+++++++..+++++.+
T Consensus         3 ~~l~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   82 (260)
T PRK07063          3 NRLAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEE   82 (260)
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence            46889999999999999999999999999999999999998888888887643456799999999999999999999999


Q ss_pred             cCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccc
Q 019722          111 LNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIR  188 (336)
Q Consensus       111 ~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~  188 (336)
                      .++++|++|||||.....  .+.+.++|++++++|+.+++.++++++|.|++++     .|+||++||..+..+      
T Consensus        83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-----~g~iv~isS~~~~~~------  151 (260)
T PRK07063         83 AFGPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERG-----RGSIVNIASTHAFKI------  151 (260)
T ss_pred             HhCCCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhC-----CeEEEEECChhhccC------
Confidence            999999999999975432  4567889999999999999999999999998764     489999999877655      


Q ss_pred             ccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccch-------hHHHHHHHHH
Q 019722          189 YLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREG-------FITDLVFFLT  261 (336)
Q Consensus       189 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~-------~~~~~~~~~~  261 (336)
                                 .++...|+++|++++.|+++++.|+++.|  ||||+|+||+++|++......       .........+
T Consensus       152 -----------~~~~~~Y~~sKaa~~~~~~~la~el~~~g--Irvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~  218 (260)
T PRK07063        152 -----------IPGCFPYPVAKHGLLGLTRALGIEYAARN--VRVNAIAPGYIETQLTEDWWNAQPDPAAARAETLALQP  218 (260)
T ss_pred             -----------CCCchHHHHHHHHHHHHHHHHHHHhCccC--eEEEEEeeCCccChhhhhhhhccCChHHHHHHHHhcCC
Confidence                       56677899999999999999999999887  999999999999998654211       1111112233


Q ss_pred             HhhcCChHHHHHHHHHHHhcCccccCCceeeccCcccc
Q 019722          262 SKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAW  299 (336)
Q Consensus       262 ~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  299 (336)
                      ..+..+|+|++..++|+++ +...+++|+.+..+|+..
T Consensus       219 ~~r~~~~~~va~~~~fl~s-~~~~~itG~~i~vdgg~~  255 (260)
T PRK07063        219 MKRIGRPEEVAMTAVFLAS-DEAPFINATCITIDGGRS  255 (260)
T ss_pred             CCCCCCHHHHHHHHHHHcC-ccccccCCcEEEECCCee
Confidence            4567799999999999987 667899999999988744

>PRK06196 oxidoreductase; Provisional

Probab=100.00  E-value=1.7e-38  Score=292.59  Aligned_cols=290  Identities=39%  Similarity=0.492  Sum_probs=228.6

Q ss_pred             CCCCCCccccccCCCCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccC
Q 019722           16 GYGSKSTAEQVTDGCPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDL   95 (336)
Q Consensus        16 ~~~~~~~~~~~~~~~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl   95 (336)
                      +|+++....++.. ..+++||+++||||++|||++++++|+++|++|++++|+.++.++..+++.      ++.++++|+
T Consensus         8 ~~~~~~~~~~~~~-~~~l~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~------~v~~~~~Dl   80 (315)
T PRK06196          8 GFGAASTAEEVLA-GHDLSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGID------GVEVVMLDL   80 (315)
T ss_pred             CCCccccHHHHhc-CCCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhh------hCeEEEccC
Confidence            3777776666654 467899999999999999999999999999999999999888777666542      378899999


Q ss_pred             CCHHHHHHHHHHHHhcCCCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEc
Q 019722           96 SSLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVS  175 (336)
Q Consensus        96 ~~~~~v~~~~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vs  175 (336)
                      +|.++++++++++.+.++++|+||||||+.......+.++|+..+++|+.+++.++++++|.|.+++     .++||++|
T Consensus        81 ~d~~~v~~~~~~~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~-----~~~iV~vS  155 (315)
T PRK06196         81 ADLESVRAFAERFLDSGRRIDILINNAGVMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAAGA-----GARVVALS  155 (315)
T ss_pred             CCHHHHHHHHHHHHhcCCCCCEEEECCCCCCCCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcC-----CCeEEEEC
Confidence            9999999999999988899999999999865555567788999999999999999999999998764     47999999


Q ss_pred             CCccccccCCcccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHH-
Q 019722          176 SSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFIT-  254 (336)
Q Consensus       176 S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~-  254 (336)
                      |.++....   ..+++...  ...++....|+.||++++.+++.+++++.+.|  |+||+|+||++.|++.+....... 
T Consensus       156 S~~~~~~~---~~~~~~~~--~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~g--i~v~~v~PG~v~t~~~~~~~~~~~~  228 (315)
T PRK06196        156 SAGHRRSP---IRWDDPHF--TRGYDKWLAYGQSKTANALFAVHLDKLGKDQG--VRAFSVHPGGILTPLQRHLPREEQV  228 (315)
T ss_pred             CHHhccCC---CCccccCc--cCCCChHHHHHHHHHHHHHHHHHHHHHhcCCC--cEEEEeeCCcccCCccccCChhhhh
Confidence            97654321   11111110  12255678899999999999999999998877  999999999999998765432110 


Q ss_pred             --HHHH---HHHHhhcCChHHHHHHHHHHHhcCccccCCceeeccCcccc----------cccCCCCHHHHHHHHHHHHH
Q 019722          255 --DLVF---FLTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAW----------TSKLGSNSNEASRLWAASEL  319 (336)
Q Consensus       255 --~~~~---~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~----------~~~~~~~~~~~~~~w~~~~~  319 (336)
                        ....   .....+..+|+++|.+++|+++.+......|.|+..+....          ..+...|.+..+++|+.+++
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~lW~~s~~  308 (315)
T PRK06196        229 ALGWVDEHGNPIDPGFKTPAQGAATQVWAATSPQLAGMGGLYCEDCDIAEPTPKDAPWSGVRPHAIDPEAAARLWALSAA  308 (315)
T ss_pred             hhhhhhhhhhhhhhhcCCHhHHHHHHHHHhcCCccCCCCCeEeCCCcccccCCcccccCCCCcccCCHHHHHHHHHHHHH
Confidence              0111   01112467899999999999987776666788886654432          24557789999999999999


Q ss_pred             hhccC
Q 019722          320 LVSRD  324 (336)
Q Consensus       320 ~~~~~  324 (336)
                      +++..
T Consensus       309 ~~~~~  313 (315)
T PRK06196        309 LTGVD  313 (315)
T ss_pred             HHCCC
Confidence            98754

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=100.00  E-value=1.9e-39  Score=284.44  Aligned_cols=231  Identities=28%  Similarity=0.346  Sum_probs=202.6

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHh
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHS  110 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  110 (336)
                      +.+.++++||||||+|||.++|++|+++|++|++++|+.++++++.++++..+ +..+.++++|+++++++..+.+++.+
T Consensus         2 ~~~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~-~v~v~vi~~DLs~~~~~~~l~~~l~~   80 (265)
T COG0300           2 GPMKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKT-GVEVEVIPADLSDPEALERLEDELKE   80 (265)
T ss_pred             CCCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhh-CceEEEEECcCCChhHHHHHHHHHHh
Confidence            45789999999999999999999999999999999999999999999999887 67899999999999999999999999


Q ss_pred             cCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccc
Q 019722          111 LNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIR  188 (336)
Q Consensus       111 ~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~  188 (336)
                      ....||+||||||+....  .+.+.++.++++++|+.+...|+++++|.|.+++     .|.||||+|.++..+      
T Consensus        81 ~~~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~-----~G~IiNI~S~ag~~p------  149 (265)
T COG0300          81 RGGPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERG-----AGHIINIGSAAGLIP------  149 (265)
T ss_pred             cCCcccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-----CceEEEEechhhcCC------
Confidence            888999999999976654  7888999999999999999999999999999976     599999999999887      


Q ss_pred             ccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHHHHHHHHhhcCCh
Q 019722          189 YLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSKLLKTI  268 (336)
Q Consensus       189 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~  268 (336)
                                 .|....|++||+++.+|+++|+.|+...|  |+|.+|+||+|.|+++......   .....+.....+|
T Consensus       150 -----------~p~~avY~ATKa~v~~fSeaL~~EL~~~g--V~V~~v~PG~~~T~f~~~~~~~---~~~~~~~~~~~~~  213 (265)
T COG0300         150 -----------TPYMAVYSATKAFVLSFSEALREELKGTG--VKVTAVCPGPTRTEFFDAKGSD---VYLLSPGELVLSP  213 (265)
T ss_pred             -----------CcchHHHHHHHHHHHHHHHHHHHHhcCCC--eEEEEEecCccccccccccccc---cccccchhhccCH
Confidence                       67888999999999999999999998887  9999999999999999621110   1111234556789


Q ss_pred             HHHHHHHHHHHhcCccccCCc
Q 019722          269 PQGAATTCYVAIHPRLVNVSG  289 (336)
Q Consensus       269 ~~~a~~~~~l~~~~~~~~~~G  289 (336)
                      +++|...+..+......-+-|
T Consensus       214 ~~va~~~~~~l~~~k~~ii~~  234 (265)
T COG0300         214 EDVAEAALKALEKGKREIIPG  234 (265)
T ss_pred             HHHHHHHHHHHhcCCceEecC
Confidence            999999999997544433333

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.8e-39  Score=291.22  Aligned_cols=241  Identities=17%  Similarity=0.127  Sum_probs=197.4

Q ss_pred             CCCCCCEEEEeCCCC--hHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHH
Q 019722           31 PNLSSVTAIITGATS--GIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQF  108 (336)
Q Consensus        31 ~~l~gk~~lItGgs~--gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~  108 (336)
                      ..++||++|||||++  |||+++|++|+++|++|++++|+. ..++..+++.... + ...++++|++|+++++++++++
T Consensus         4 ~~~~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~-~~~~~~~~l~~~~-g-~~~~~~~Dv~~~~~v~~~~~~~   80 (260)
T PRK06603          4 GLLQGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSE-VLEKRVKPLAEEI-G-CNFVSELDVTNPKSISNLFDDI   80 (260)
T ss_pred             cccCCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCch-HHHHHHHHHHHhc-C-CceEEEccCCCHHHHHHHHHHH
Confidence            457899999999997  999999999999999999999884 3444555565443 2 2346789999999999999999


Q ss_pred             HhcCCCccEEEEcccCCC------CCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccc
Q 019722          109 HSLNLPLNLLINNAGKFA------HQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWF  182 (336)
Q Consensus       109 ~~~~~~id~lv~nAg~~~------~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~  182 (336)
                      .+.++++|+||||||+..      +..+.+.++|++.+++|+.+++.+++++.|.|.+       +|+||++||..+..+
T Consensus        81 ~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~-------~G~Iv~isS~~~~~~  153 (260)
T PRK06603         81 KEKWGSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHD-------GGSIVTLTYYGAEKV  153 (260)
T ss_pred             HHHcCCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhcc-------CceEEEEecCccccC
Confidence            999999999999999753      2256788999999999999999999999999953       389999999877654


Q ss_pred             cCCcccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccch---hHHHHHHH
Q 019722          183 SGDMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREG---FITDLVFF  259 (336)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~---~~~~~~~~  259 (336)
                                       .+.+..|++||+++++|+++++.|+++.|  ||||+|+||+++|++......   ........
T Consensus       154 -----------------~~~~~~Y~asKaal~~l~~~la~el~~~g--IrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~  214 (260)
T PRK06603        154 -----------------IPNYNVMGVAKAALEASVKYLANDMGENN--IRVNAISAGPIKTLASSAIGDFSTMLKSHAAT  214 (260)
T ss_pred             -----------------CCcccchhhHHHHHHHHHHHHHHHhhhcC--eEEEEEecCcCcchhhhcCCCcHHHHHHHHhc
Confidence                             56677899999999999999999999988  999999999999998643221   11111122


Q ss_pred             HHHhhcCChHHHHHHHHHHHhcCccccCCceeeccCcccccc
Q 019722          260 LTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWTS  301 (336)
Q Consensus       260 ~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~~  301 (336)
                      .+..+...|+|++.+++|+++ +.+.+++|+.+..+|+....
T Consensus       215 ~p~~r~~~pedva~~~~~L~s-~~~~~itG~~i~vdgG~~~~  255 (260)
T PRK06603        215 APLKRNTTQEDVGGAAVYLFS-ELSKGVTGEIHYVDCGYNIM  255 (260)
T ss_pred             CCcCCCCCHHHHHHHHHHHhC-cccccCcceEEEeCCccccc
Confidence            334556789999999999987 77889999999999875443

>PRK08589 short chain dehydrogenase; Validated

Probab=100.00  E-value=2.3e-39  Score=292.41  Aligned_cols=257  Identities=24%  Similarity=0.279  Sum_probs=210.9

Q ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhc
Q 019722           32 NLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSL  111 (336)
Q Consensus        32 ~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  111 (336)
                      .++||++|||||++|||++++++|+++|++|++++|+ +.+++..+++.+.  +.++.++++|+++++++..+++++.+.
T Consensus         3 ~l~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~   79 (272)
T PRK08589          3 RLENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSN--GGKAKAYHVDISDEQQVKDFASEIKEQ   79 (272)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhc--CCeEEEEEeecCCHHHHHHHHHHHHHH
Confidence            5789999999999999999999999999999999999 7777777777653  457999999999999999999999999


Q ss_pred             CCCccEEEEcccCCCC---CCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccc
Q 019722          112 NLPLNLLINNAGKFAH---QHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIR  188 (336)
Q Consensus       112 ~~~id~lv~nAg~~~~---~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~  188 (336)
                      ++++|+||||||+...   ..+.+.+.|++++++|+.+++.++++++|.|+++      +|+||++||..+..+      
T Consensus        80 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~------~g~iv~isS~~~~~~------  147 (272)
T PRK08589         80 FGRVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQ------GGSIINTSSFSGQAA------  147 (272)
T ss_pred             cCCcCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc------CCEEEEeCchhhcCC------
Confidence            9999999999997643   2466778999999999999999999999999865      379999999877654      


Q ss_pred             ccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHH----HHHH-----H
Q 019722          189 YLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFIT----DLVF-----F  259 (336)
Q Consensus       189 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~----~~~~-----~  259 (336)
                                 .+....|++||++++.|++++++|+.+.|  |+||+|+||+|+|++.+......+    ....     .
T Consensus       148 -----------~~~~~~Y~asKaal~~l~~~la~e~~~~g--I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~  214 (272)
T PRK08589        148 -----------DLYRSGYNAAKGAVINFTKSIAIEYGRDG--IRANAIAPGTIETPLVDKLTGTSEDEAGKTFRENQKWM  214 (272)
T ss_pred             -----------CCCCchHHHHHHHHHHHHHHHHHHhhhcC--eEEEEEecCcccCchhhhhcccchhhHHHHHhhhhhcc
Confidence                       44567899999999999999999999887  999999999999998765321111    0010     1


Q ss_pred             HHHhhcCChHHHHHHHHHHHhcCccccCCceeeccCcccccccCCCCHHHHHHHHHHHH
Q 019722          260 LTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWTSKLGSNSNEASRLWAASE  318 (336)
Q Consensus       260 ~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~w~~~~  318 (336)
                      .+..+..+|++++..++|+++ +...+++|+.+..+|+.... .-.+..+.+..|+++.
T Consensus       215 ~~~~~~~~~~~va~~~~~l~s-~~~~~~~G~~i~vdgg~~~~-~~~~~~~~~~~~~~~~  271 (272)
T PRK08589        215 TPLGRLGKPEEVAKLVVFLAS-DDSSFITGETIRIDGGVMAY-TWPGEMLSDDSWKRTL  271 (272)
T ss_pred             CCCCCCcCHHHHHHHHHHHcC-chhcCcCCCEEEECCCcccC-CCCCcccccchhhhhc
Confidence            123345689999999999987 66789999999988874322 2335555677777654

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=100.00  E-value=1e-39  Score=292.40  Aligned_cols=241  Identities=17%  Similarity=0.120  Sum_probs=198.1

Q ss_pred             CCCCCCCEEEEeCCC--ChHHHHHHHHHHHCCCEEEEeeCChH--HHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHH
Q 019722           30 CPNLSSVTAIITGAT--SGIGAETARVLAKRGARLVLPARSLK--AAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFV  105 (336)
Q Consensus        30 ~~~l~gk~~lItGgs--~gIG~aia~~L~~~G~~V~~~~r~~~--~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~  105 (336)
                      +++++||+++||||+  +|||+++|++|+++|++|++++|+.+  +.++..+++.+.  ..++.++++|++|++++++++
T Consensus         1 ~~~l~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~v~~~~   78 (258)
T PRK07370          1 MLDLTGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEP--LNPSLFLPCDVQDDAQIEETF   78 (258)
T ss_pred             CcccCCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhc--cCcceEeecCcCCHHHHHHHH
Confidence            356899999999986  89999999999999999999876543  344555556543  235778999999999999999


Q ss_pred             HHHHhcCCCccEEEEcccCCC------CCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCcc
Q 019722          106 SQFHSLNLPLNLLINNAGKFA------HQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIH  179 (336)
Q Consensus       106 ~~~~~~~~~id~lv~nAg~~~------~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~  179 (336)
                      +++.+.++++|+||||||+..      +..+.+.++|++++++|+.+++.++|+++|.|.+       +|+||++||..+
T Consensus        79 ~~~~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~-------~g~Iv~isS~~~  151 (258)
T PRK07370         79 ETIKQKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSE-------GGSIVTLTYLGG  151 (258)
T ss_pred             HHHHHHcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhh-------CCeEEEEecccc
Confidence            999999999999999999753      2256788999999999999999999999999964       379999999877


Q ss_pred             ccccCCcccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccc---hhHHHH
Q 019722          180 SWFSGDMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRERE---GFITDL  256 (336)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~---~~~~~~  256 (336)
                      ..+                 .+.+..|++||+++.+|+++++.|+++.|  |+||+|+||+++|++.+...   ......
T Consensus       152 ~~~-----------------~~~~~~Y~asKaal~~l~~~la~el~~~g--I~Vn~i~PG~v~T~~~~~~~~~~~~~~~~  212 (258)
T PRK07370        152 VRA-----------------IPNYNVMGVAKAALEASVRYLAAELGPKN--IRVNAISAGPIRTLASSAVGGILDMIHHV  212 (258)
T ss_pred             ccC-----------------CcccchhhHHHHHHHHHHHHHHHHhCcCC--eEEEEEecCcccCchhhccccchhhhhhh
Confidence            654                 56777899999999999999999999888  99999999999999865321   111111


Q ss_pred             HHHHHHhhcCChHHHHHHHHHHHhcCccccCCceeeccCcccc
Q 019722          257 VFFLTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAW  299 (336)
Q Consensus       257 ~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  299 (336)
                      ....+..+...|+|++..++|+++ +.+.+++|+.+..+|+..
T Consensus       213 ~~~~p~~r~~~~~dva~~~~fl~s-~~~~~~tG~~i~vdgg~~  254 (258)
T PRK07370        213 EEKAPLRRTVTQTEVGNTAAFLLS-DLASGITGQTIYVDAGYC  254 (258)
T ss_pred             hhcCCcCcCCCHHHHHHHHHHHhC-hhhccccCcEEEECCccc
Confidence            122233456789999999999987 777899999998888643

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.8e-39  Score=290.91  Aligned_cols=239  Identities=17%  Similarity=0.171  Sum_probs=196.0

Q ss_pred             CCCCCCCEEEEeCCC--ChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGAT--SGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQ  107 (336)
Q Consensus        30 ~~~l~gk~~lItGgs--~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~  107 (336)
                      .++++||++|||||+  +|||+++|++|+++|++|++++|+.+.. +..+++.++.  ..+.+++||+++++++++++++
T Consensus         5 ~~~~~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~-~~~~~~~~~~--~~~~~~~~D~~~~~~v~~~~~~   81 (258)
T PRK07533          5 LLPLAGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKAR-PYVEPLAEEL--DAPIFLPLDVREPGQLEAVFAR   81 (258)
T ss_pred             ccccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhH-HHHHHHHHhh--ccceEEecCcCCHHHHHHHHHH
Confidence            567899999999998  4999999999999999999999986432 2333443332  2356889999999999999999


Q ss_pred             HHhcCCCccEEEEcccCCCC------CCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCcccc
Q 019722          108 FHSLNLPLNLLINNAGKFAH------QHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSW  181 (336)
Q Consensus       108 ~~~~~~~id~lv~nAg~~~~------~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~  181 (336)
                      +.+.++++|++|||||+...      ..+.+.++|++++++|+.+++.++++++|.|++       +|+||++||..+..
T Consensus        82 ~~~~~g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~-------~g~Ii~iss~~~~~  154 (258)
T PRK07533         82 IAEEWGRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTN-------GGSLLTMSYYGAEK  154 (258)
T ss_pred             HHHHcCCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhcc-------CCEEEEEecccccc
Confidence            99999999999999997542      245678999999999999999999999999953       37999999987655


Q ss_pred             ccCCcccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccch---hHHHHHH
Q 019722          182 FSGDMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREG---FITDLVF  258 (336)
Q Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~---~~~~~~~  258 (336)
                      +                 .+.+..|++||+++.+|+++++.|+++.|  |+||+|+||+++|++.+....   .......
T Consensus       155 ~-----------------~~~~~~Y~asKaal~~l~~~la~el~~~g--I~Vn~v~PG~v~T~~~~~~~~~~~~~~~~~~  215 (258)
T PRK07533        155 V-----------------VENYNLMGPVKAALESSVRYLAAELGPKG--IRVHAISPGPLKTRAASGIDDFDALLEDAAE  215 (258)
T ss_pred             C-----------------CccchhhHHHHHHHHHHHHHHHHHhhhcC--cEEEEEecCCcCChhhhccCCcHHHHHHHHh
Confidence            4                 56677899999999999999999999888  999999999999998764321   1112222


Q ss_pred             HHHHhhcCChHHHHHHHHHHHhcCccccCCceeeccCccc
Q 019722          259 FLTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEA  298 (336)
Q Consensus       259 ~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  298 (336)
                      ..+..+...|+|++..++|+++ +.+.+++|+.+..+|+.
T Consensus       216 ~~p~~r~~~p~dva~~~~~L~s-~~~~~itG~~i~vdgg~  254 (258)
T PRK07533        216 RAPLRRLVDIDDVGAVAAFLAS-DAARRLTGNTLYIDGGY  254 (258)
T ss_pred             cCCcCCCCCHHHHHHHHHHHhC-hhhccccCcEEeeCCcc
Confidence            2334456789999999999987 66789999999888864

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=2.2e-39  Score=290.73  Aligned_cols=239  Identities=15%  Similarity=0.099  Sum_probs=196.4

Q ss_pred             CCCCCEEEEeCC--CChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           32 NLSSVTAIITGA--TSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        32 ~l~gk~~lItGg--s~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      .++||++|||||  ++|||+++|++|+++|++|++++|+. +..+..+++....  .....++||++++++++++++++.
T Consensus         3 ~~~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~-~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~   79 (261)
T PRK08690          3 FLQGKKILITGMISERSIAYGIAKACREQGAELAFTYVVD-KLEERVRKMAAEL--DSELVFRCDVASDDEINQVFADLG   79 (261)
T ss_pred             ccCCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcH-HHHHHHHHHHhcc--CCceEEECCCCCHHHHHHHHHHHH
Confidence            478999999997  67999999999999999999998864 3444555554432  245678999999999999999999


Q ss_pred             hcCCCccEEEEcccCCCCC-------CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccc
Q 019722          110 SLNLPLNLLINNAGKFAHQ-------HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWF  182 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~~~-------~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~  182 (336)
                      +.++++|++|||||+....       .+.+.++|+..+++|+.+++.++|+++|.|+++      +|+||++||.++..+
T Consensus        80 ~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~------~g~Iv~iss~~~~~~  153 (261)
T PRK08690         80 KHWDGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGR------NSAIVALSYLGAVRA  153 (261)
T ss_pred             HHhCCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhc------CcEEEEEcccccccC
Confidence            9999999999999986431       345677899999999999999999999999654      379999999877654


Q ss_pred             cCCcccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccch---hHHHHHHH
Q 019722          183 SGDMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREG---FITDLVFF  259 (336)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~---~~~~~~~~  259 (336)
                                       .+++..|+++|+++.+|+++++.|+++.|  ||||+|+||+|+|++.+....   ........
T Consensus       154 -----------------~~~~~~Y~asKaal~~l~~~la~e~~~~g--IrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~  214 (261)
T PRK08690        154 -----------------IPNYNVMGMAKASLEAGIRFTAACLGKEG--IRCNGISAGPIKTLAASGIADFGKLLGHVAAH  214 (261)
T ss_pred             -----------------CCCcccchhHHHHHHHHHHHHHHHhhhcC--eEEEEEecCcccchhhhcCCchHHHHHHHhhc
Confidence                             56778899999999999999999999988  999999999999998654321   11111122


Q ss_pred             HHHhhcCChHHHHHHHHHHHhcCccccCCceeeccCcccc
Q 019722          260 LTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAW  299 (336)
Q Consensus       260 ~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  299 (336)
                      .+..+...|+|+|..++|+++ +...+++|+.+..+|+..
T Consensus       215 ~p~~r~~~peevA~~v~~l~s-~~~~~~tG~~i~vdgG~~  253 (261)
T PRK08690        215 NPLRRNVTIEEVGNTAAFLLS-DLSSGITGEITYVDGGYS  253 (261)
T ss_pred             CCCCCCCCHHHHHHHHHHHhC-cccCCcceeEEEEcCCcc
Confidence            344566789999999999987 667899999999998754

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=2.3e-39  Score=290.00  Aligned_cols=240  Identities=18%  Similarity=0.158  Sum_probs=195.0

Q ss_pred             CCCCCCEEEEeCCC--ChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHH
Q 019722           31 PNLSSVTAIITGAT--SGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQF  108 (336)
Q Consensus        31 ~~l~gk~~lItGgs--~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~  108 (336)
                      ++++||+++||||+  +|||+++|++|+++|++|++++|+... .+..+++.++..+.++.++++|++|+++++++++++
T Consensus         3 ~~~~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~   81 (257)
T PRK08594          3 LSLEGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERL-EKEVRELADTLEGQESLLLPCDVTSDEEITACFETI   81 (257)
T ss_pred             cccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccc-hHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHH
Confidence            56899999999997  899999999999999999999876321 122333333322457889999999999999999999


Q ss_pred             HhcCCCccEEEEcccCCCC------CCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccc
Q 019722          109 HSLNLPLNLLINNAGKFAH------QHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWF  182 (336)
Q Consensus       109 ~~~~~~id~lv~nAg~~~~------~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~  182 (336)
                      .+.++++|++|||||+...      ..+.+.++|++.+++|+.+++.++++++|.|.+       +|+||++||..+..+
T Consensus        82 ~~~~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-------~g~Iv~isS~~~~~~  154 (257)
T PRK08594         82 KEEVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTE-------GGSIVTLTYLGGERV  154 (257)
T ss_pred             HHhCCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhccc-------CceEEEEcccCCccC
Confidence            9999999999999997531      246678899999999999999999999999954       379999999887665


Q ss_pred             cCCcccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccch---hHHHHHHH
Q 019722          183 SGDMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREG---FITDLVFF  259 (336)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~---~~~~~~~~  259 (336)
                                       .+.+..|++||+++++|+++++.|+++.|  ||||+|+||+++|++.+....   ........
T Consensus       155 -----------------~~~~~~Y~asKaal~~l~~~la~el~~~g--Irvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~  215 (257)
T PRK08594        155 -----------------VQNYNVMGVAKASLEASVKYLANDLGKDG--IRVNAISAGPIRTLSAKGVGGFNSILKEIEER  215 (257)
T ss_pred             -----------------CCCCchhHHHHHHHHHHHHHHHHHhhhcC--CEEeeeecCcccCHhHhhhccccHHHHHHhhc
Confidence                             55667899999999999999999999888  999999999999997543211   11111112


Q ss_pred             HHHhhcCChHHHHHHHHHHHhcCccccCCceeeccCccc
Q 019722          260 LTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEA  298 (336)
Q Consensus       260 ~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  298 (336)
                      .+..+..+|++++..++|+++ +.+.+++|+.+..+|+.
T Consensus       216 ~p~~r~~~p~~va~~~~~l~s-~~~~~~tG~~~~~dgg~  253 (257)
T PRK08594        216 APLRRTTTQEEVGDTAAFLFS-DLSRGVTGENIHVDSGY  253 (257)
T ss_pred             CCccccCCHHHHHHHHHHHcC-cccccccceEEEECCch
Confidence            233456789999999999987 77789999999888764

>PRK07478 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.9e-39  Score=285.80  Aligned_cols=243  Identities=25%  Similarity=0.279  Sum_probs=205.4

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      ++++++|++|||||++|||++++++|+++|++|++++|++++++++.++++..  +.++.++.+|+++++++.++++++.
T Consensus         1 ~~~~~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~   78 (254)
T PRK07478          1 MMRLNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAE--GGEAVALAGDVRDEAYAKALVALAV   78 (254)
T ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHH
Confidence            46789999999999999999999999999999999999999888888877654  4578999999999999999999999


Q ss_pred             hcCCCccEEEEcccCCCC---CCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCcccc-ccCC
Q 019722          110 SLNLPLNLLINNAGKFAH---QHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSW-FSGD  185 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~~---~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~-~~~~  185 (336)
                      +.++++|++|||||+...   ..+.+.++|++++++|+.+++.++++++|.|++.+     .++||++||..+.. +   
T Consensus        79 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~-----~~~iv~~sS~~~~~~~---  150 (254)
T PRK07478         79 ERFGGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARG-----GGSLIFTSTFVGHTAG---  150 (254)
T ss_pred             HhcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-----CceEEEEechHhhccC---
Confidence            999999999999997542   25677889999999999999999999999998764     58999999987642 2   


Q ss_pred             cccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchh--HHHHHH-HHHH
Q 019722          186 MIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGF--ITDLVF-FLTS  262 (336)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~--~~~~~~-~~~~  262 (336)
                                    .+.+..|++||++++.++++++.++.+.|  |+||+|+||+++|++.+.....  ...... ..+.
T Consensus       151 --------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~  214 (254)
T PRK07478        151 --------------FPGMAAYAASKAGLIGLTQVLAAEYGAQG--IRVNALLPGGTDTPMGRAMGDTPEALAFVAGLHAL  214 (254)
T ss_pred             --------------CCCcchhHHHHHHHHHHHHHHHHHHhhcC--EEEEEEeeCcccCcccccccCCHHHHHHHHhcCCC
Confidence                          45677899999999999999999999887  9999999999999987654211  111111 1123


Q ss_pred             hhcCChHHHHHHHHHHHhcCccccCCceeeccCcccc
Q 019722          263 KLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAW  299 (336)
Q Consensus       263 ~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  299 (336)
                      ....+|++++..++|+++ +...+++|+.+..+|+..
T Consensus       215 ~~~~~~~~va~~~~~l~s-~~~~~~~G~~~~~dgg~~  250 (254)
T PRK07478        215 KRMAQPEEIAQAALFLAS-DAASFVTGTALLVDGGVS  250 (254)
T ss_pred             CCCcCHHHHHHHHHHHcC-chhcCCCCCeEEeCCchh
Confidence            456789999999999986 666899999998888743

>PRK07062 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.7e-38  Score=285.39  Aligned_cols=244  Identities=22%  Similarity=0.223  Sum_probs=207.7

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      +++++||++|||||++|||++++++|+++|++|++++|+.+++++..+++...+++.++.++++|+++++++.++++++.
T Consensus         3 ~~~l~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   82 (265)
T PRK07062          3 QIQLEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVE   82 (265)
T ss_pred             ccccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHH
Confidence            35689999999999999999999999999999999999999888888888776666689999999999999999999999


Q ss_pred             hcCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcc
Q 019722          110 SLNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMI  187 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~  187 (336)
                      +.++++|+||||||.....  .+.+.++|++.+++|+.+++.++++++|.|++++     .|+||++||..+..+     
T Consensus        83 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-----~g~iv~isS~~~~~~-----  152 (265)
T PRK07062         83 ARFGGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASA-----AASIVCVNSLLALQP-----  152 (265)
T ss_pred             HhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccC-----CcEEEEeccccccCC-----
Confidence            9999999999999975432  5667889999999999999999999999998764     489999999887655     


Q ss_pred             cccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccch-------hHHHHHH--
Q 019722          188 RYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREG-------FITDLVF--  258 (336)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~-------~~~~~~~--  258 (336)
                                  .+....|+++|+++.+++++++.|+.+.|  |+||+|+||+++|++......       .+.....  
T Consensus       153 ------------~~~~~~y~asKaal~~~~~~la~e~~~~g--i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~  218 (265)
T PRK07062        153 ------------EPHMVATSAARAGLLNLVKSLATELAPKG--VRVNSILLGLVESGQWRRRYEARADPGQSWEAWTAAL  218 (265)
T ss_pred             ------------CCCchHhHHHHHHHHHHHHHHHHHhhhcC--eEEEEEecCccccchhhhHHHHhhccCCChHHHHHHH
Confidence                        55677899999999999999999999887  999999999999998653211       1111111  


Q ss_pred             ----HHHHhhcCChHHHHHHHHHHHhcCccccCCceeeccCccc
Q 019722          259 ----FLTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEA  298 (336)
Q Consensus       259 ----~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  298 (336)
                          ..+..+...|++++..++|+++ +...+++|+.+..+|+.
T Consensus       219 ~~~~~~p~~r~~~p~~va~~~~~L~s-~~~~~~tG~~i~vdgg~  261 (265)
T PRK07062        219 ARKKGIPLGRLGRPDEAARALFFLAS-PLSSYTTGSHIDVSGGF  261 (265)
T ss_pred             hhcCCCCcCCCCCHHHHHHHHHHHhC-chhcccccceEEEcCce
Confidence                1233456789999999999886 77789999999988874

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=7.5e-39  Score=287.24  Aligned_cols=237  Identities=15%  Similarity=0.182  Sum_probs=194.6

Q ss_pred             CCCCEEEEeCCCC--hHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHh
Q 019722           33 LSSVTAIITGATS--GIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHS  110 (336)
Q Consensus        33 l~gk~~lItGgs~--gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  110 (336)
                      ++||++|||||++  |||+++|++|+++|++|++++|+ .+.++..+++....  .++.+++||++|+++++++++++.+
T Consensus         4 l~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~-~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~v~~~~~~~~~   80 (262)
T PRK07984          4 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQN-DKLKGRVEEFAAQL--GSDIVLPCDVAEDASIDAMFAELGK   80 (262)
T ss_pred             cCCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecc-hhHHHHHHHHHhcc--CCceEeecCCCCHHHHHHHHHHHHh
Confidence            7899999999986  99999999999999999999998 34555566665543  3567899999999999999999999


Q ss_pred             cCCCccEEEEcccCCCC-------CCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCcccccc
Q 019722          111 LNLPLNLLINNAGKFAH-------QHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFS  183 (336)
Q Consensus       111 ~~~~id~lv~nAg~~~~-------~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~  183 (336)
                      .++++|++|||||+...       ..+.+.++|++++++|+.+++.+++++.|.+.+       +|+||++||.++..+ 
T Consensus        81 ~~g~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-------~g~Iv~iss~~~~~~-  152 (262)
T PRK07984         81 VWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNP-------GSALLTLSYLGAERA-  152 (262)
T ss_pred             hcCCCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcC-------CcEEEEEecCCCCCC-
Confidence            99999999999997543       134567889999999999999999999986642       379999999876654 


Q ss_pred             CCcccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchh---HHHHHHHH
Q 019722          184 GDMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGF---ITDLVFFL  260 (336)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~---~~~~~~~~  260 (336)
                                      .+.+..|++||+++++|+++++.|+++.|  ||||+|+||+++|++.......   ........
T Consensus       153 ----------------~~~~~~Y~asKaal~~l~~~la~el~~~g--IrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~  214 (262)
T PRK07984        153 ----------------IPNYNVMGLAKASLEANVRYMANAMGPEG--VRVNAISAGPIRTLAASGIKDFRKMLAHCEAVT  214 (262)
T ss_pred             ----------------CCCcchhHHHHHHHHHHHHHHHHHhcccC--cEEeeeecCcccchHHhcCCchHHHHHHHHHcC
Confidence                            56677899999999999999999999988  9999999999999875432221   11111223


Q ss_pred             HHhhcCChHHHHHHHHHHHhcCccccCCceeeccCcccc
Q 019722          261 TSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAW  299 (336)
Q Consensus       261 ~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  299 (336)
                      +..+...|+|++.+++|+++ +...+++|+.+..+|+..
T Consensus       215 p~~r~~~pedva~~~~~L~s-~~~~~itG~~i~vdgg~~  252 (262)
T PRK07984        215 PIRRTVTIEDVGNSAAFLCS-DLSAGISGEVVHVDGGFS  252 (262)
T ss_pred             CCcCCCCHHHHHHHHHHHcC-cccccccCcEEEECCCcc
Confidence            34567789999999999987 667899999999988744

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=100.00  E-value=1.2e-38  Score=284.98  Aligned_cols=246  Identities=27%  Similarity=0.317  Sum_probs=205.5

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCC-CCceEEEeccCCCHHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCP-GSDIVVLPLDLSSLSSVRNFVSQF  108 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~  108 (336)
                      ++.|.||++|||||++|||+++|++|++.|++|++++|+.+.+++...++..... +.++..+.||++++++++++++..
T Consensus         3 ~~~l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~   82 (270)
T KOG0725|consen    3 GGRLAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFA   82 (270)
T ss_pred             CccCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHH
Confidence            4679999999999999999999999999999999999999999888888776432 467999999999999999999999


Q ss_pred             Hhc-CCCccEEEEcccCCCCC---CCCCchhhhhHHHHHHhH-HHHHHHHHHHHHHHhhccCCCCCeEEEEcCCcccccc
Q 019722          109 HSL-NLPLNLLINNAGKFAHQ---HAISEDGIEMTFATNYLG-HFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFS  183 (336)
Q Consensus       109 ~~~-~~~id~lv~nAg~~~~~---~~~~~~~~~~~~~vn~~~-~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~  183 (336)
                      .++ +|+||+||||||.....   .+.+++.|+.++++|+.| .+.+.+.+.+++.+++     +|.|+++||.++... 
T Consensus        83 ~~~~~GkidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~-----gg~I~~~ss~~~~~~-  156 (270)
T KOG0725|consen   83 VEKFFGKIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSK-----GGSIVNISSVAGVGP-  156 (270)
T ss_pred             HHHhCCCCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcC-----CceEEEEeccccccC-
Confidence            888 79999999999977643   788999999999999995 6666666666666654     589999999877654 


Q ss_pred             CCcccccccccCCCCCCChh-hHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccc---hhHHHHH--
Q 019722          184 GDMIRYLGQISRNKSHYDAT-RAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRERE---GFITDLV--  257 (336)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~-~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~---~~~~~~~--  257 (336)
                                      .... ..|+++|+++++|+|++|.|+++.|  ||||+|+||.+.|++ ....   ....++.  
T Consensus       157 ----------------~~~~~~~Y~~sK~al~~ltr~lA~El~~~g--IRvN~v~PG~i~T~~-~~~~~~~~~~~~~~~~  217 (270)
T KOG0725|consen  157 ----------------GPGSGVAYGVSKAALLQLTRSLAKELAKHG--IRVNSVSPGLVKTSL-RAAGLDDGEMEEFKEA  217 (270)
T ss_pred             ----------------CCCCcccchhHHHHHHHHHHHHHHHHhhcC--cEEEEeecCcEeCCc-cccccccchhhHHhhh
Confidence                            2222 6899999999999999999999998  999999999999998 2211   1111121  


Q ss_pred             ----HHHHHhhcCChHHHHHHHHHHHhcCccccCCceeeccCcccccc
Q 019722          258 ----FFLTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWTS  301 (336)
Q Consensus       258 ----~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~~  301 (336)
                          ...+..+...|+|++..++|+++++.+ |++|+.+.++|+....
T Consensus       218 ~~~~~~~p~gr~g~~~eva~~~~fla~~~as-yitG~~i~vdgG~~~~  264 (270)
T KOG0725|consen  218 TDSKGAVPLGRVGTPEEVAEAAAFLASDDAS-YITGQTIIVDGGFTVV  264 (270)
T ss_pred             hccccccccCCccCHHHHHHhHHhhcCcccc-cccCCEEEEeCCEEee
Confidence                233567788999999999999995555 9999999999986654

>PRK06114 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.3e-38  Score=282.90  Aligned_cols=244  Identities=21%  Similarity=0.213  Sum_probs=203.9

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChH-HHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLK-AAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQF  108 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~-~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~  108 (336)
                      +++++||++|||||++|||+++|++|+++|++|++++|+.+ .+++..++++..  +.++.++++|+++++++.++++++
T Consensus         3 ~~~~~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~i~~~~~~~   80 (254)
T PRK06114          3 LFDLDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAA--GRRAIQIAADVTSKADLRAAVART   80 (254)
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHH
Confidence            56799999999999999999999999999999999998764 456666666554  457889999999999999999999


Q ss_pred             HhcCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCc
Q 019722          109 HSLNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDM  186 (336)
Q Consensus       109 ~~~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~  186 (336)
                      .+.++++|++|||||.....  .+.+.++|++++++|+.+++.++++++|.|.+++     .++||++||..+..+.+  
T Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-----~~~iv~isS~~~~~~~~--  153 (254)
T PRK06114         81 EAELGALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENG-----GGSIVNIASMSGIIVNR--  153 (254)
T ss_pred             HHHcCCCCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcC-----CcEEEEECchhhcCCCC--
Confidence            99999999999999976532  5677899999999999999999999999998764     48999999988765411  


Q ss_pred             ccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccc--hhHHHHHHHHHHhh
Q 019722          187 IRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRERE--GFITDLVFFLTSKL  264 (336)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~--~~~~~~~~~~~~~~  264 (336)
                                   ......|+++|+++++++++++.|+.+.|  |+||+|+||+++|++.....  ..........+..+
T Consensus       154 -------------~~~~~~Y~~sKaa~~~l~~~la~e~~~~g--i~v~~v~PG~i~t~~~~~~~~~~~~~~~~~~~p~~r  218 (254)
T PRK06114        154 -------------GLLQAHYNASKAGVIHLSKSLAMEWVGRG--IRVNSISPGYTATPMNTRPEMVHQTKLFEEQTPMQR  218 (254)
T ss_pred             -------------CCCcchHHHHHHHHHHHHHHHHHHHhhcC--eEEEEEeecCccCcccccccchHHHHHHHhcCCCCC
Confidence                         12256899999999999999999999888  99999999999999875421  11122223334456


Q ss_pred             cCChHHHHHHHHHHHhcCccccCCceeeccCccc
Q 019722          265 LKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEA  298 (336)
Q Consensus       265 ~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  298 (336)
                      ..+|+|++..++|+++ +.+.+++|+.+..+|+.
T Consensus       219 ~~~~~dva~~~~~l~s-~~~~~~tG~~i~~dgg~  251 (254)
T PRK06114        219 MAKVDEMVGPAVFLLS-DAASFCTGVDLLVDGGF  251 (254)
T ss_pred             CcCHHHHHHHHHHHcC-ccccCcCCceEEECcCE
Confidence            7789999999999986 77899999999888874

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.5e-38  Score=287.00  Aligned_cols=240  Identities=16%  Similarity=0.137  Sum_probs=195.6

Q ss_pred             CCCCCCCEEEEeCCC--ChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGAT--SGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQ  107 (336)
Q Consensus        30 ~~~l~gk~~lItGgs--~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~  107 (336)
                      ..-|+||++|||||+  +|||+++|++|+++|++|++++|+.. ..+..+++.++. + ...++++|+++++++++++++
T Consensus         5 ~~~~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~-~~~~~~~l~~~~-~-~~~~~~~Dl~~~~~v~~~~~~   81 (272)
T PRK08159          5 SGLMAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDA-LKKRVEPLAAEL-G-AFVAGHCDVTDEASIDAVFET   81 (272)
T ss_pred             cccccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchH-HHHHHHHHHHhc-C-CceEEecCCCCHHHHHHHHHH
Confidence            344789999999997  89999999999999999999998743 333444444432 2 356789999999999999999


Q ss_pred             HHhcCCCccEEEEcccCCCC------CCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCcccc
Q 019722          108 FHSLNLPLNLLINNAGKFAH------QHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSW  181 (336)
Q Consensus       108 ~~~~~~~id~lv~nAg~~~~------~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~  181 (336)
                      +.+.++++|++|||||+...      ..+.+.++|++.+++|+.+++.++|+++|.|.+       +|+||++||.++..
T Consensus        82 ~~~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~-------~g~Iv~iss~~~~~  154 (272)
T PRK08159         82 LEKKWGKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTD-------GGSILTLTYYGAEK  154 (272)
T ss_pred             HHHhcCCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCC-------CceEEEEecccccc
Confidence            99999999999999997642      246788899999999999999999999999953       38999999977655


Q ss_pred             ccCCcccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhH--HHHH-H
Q 019722          182 FSGDMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFI--TDLV-F  258 (336)
Q Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~--~~~~-~  258 (336)
                      +                 .+.+..|++||+++.+|+++++.|+.+.|  ||||+|+||+++|++........  .... .
T Consensus       155 ~-----------------~p~~~~Y~asKaal~~l~~~la~el~~~g--IrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~  215 (272)
T PRK08159        155 V-----------------MPHYNVMGVAKAALEASVKYLAVDLGPKN--IRVNAISAGPIKTLAASGIGDFRYILKWNEY  215 (272)
T ss_pred             C-----------------CCcchhhhhHHHHHHHHHHHHHHHhcccC--eEEEEeecCCcCCHHHhcCCcchHHHHHHHh
Confidence            4                 66778899999999999999999999888  99999999999998764332111  1111 1


Q ss_pred             HHHHhhcCChHHHHHHHHHHHhcCccccCCceeeccCcccc
Q 019722          259 FLTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAW  299 (336)
Q Consensus       259 ~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  299 (336)
                      ..+..+...|+|++..++|+++ +...+++|+.+..+|+..
T Consensus       216 ~~p~~r~~~peevA~~~~~L~s-~~~~~itG~~i~vdgG~~  255 (272)
T PRK08159        216 NAPLRRTVTIEEVGDSALYLLS-DLSRGVTGEVHHVDSGYH  255 (272)
T ss_pred             CCcccccCCHHHHHHHHHHHhC-ccccCccceEEEECCCce
Confidence            2334456789999999999997 677899999999998854

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=3.6e-39  Score=284.70  Aligned_cols=197  Identities=31%  Similarity=0.347  Sum_probs=180.0

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      +..+.||+|+|||||+|||.++|.+|+++|++++++.|...++++..+++++..+..++++++||++|++++.++++++.
T Consensus         7 ~e~~~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~   86 (282)
T KOG1205|consen    7 MERLAGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAI   86 (282)
T ss_pred             HHHhCCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHH
Confidence            55689999999999999999999999999999999999999999998999888765579999999999999999999999


Q ss_pred             hcCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcc
Q 019722          110 SLNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMI  187 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~  187 (336)
                      +.||++|+||||||+....  ...+.+++...|++|++|++.++|+++|+|++++     .|+||++||.+|..+     
T Consensus        87 ~~fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~-----~GhIVvisSiaG~~~-----  156 (282)
T KOG1205|consen   87 RHFGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRN-----DGHIVVISSIAGKMP-----  156 (282)
T ss_pred             HhcCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcC-----CCeEEEEeccccccC-----
Confidence            9999999999999987643  5667788889999999999999999999999875     599999999999987     


Q ss_pred             cccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCcc
Q 019722          188 RYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRER  249 (336)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~  249 (336)
                                  .|....|++||+|+.+|+.+|+.|+.+.+..|++ .|+||+|+|++....
T Consensus       157 ------------~P~~~~Y~ASK~Al~~f~etLR~El~~~~~~i~i-~V~PG~V~Te~~~~~  205 (282)
T KOG1205|consen  157 ------------LPFRSIYSASKHALEGFFETLRQELIPLGTIIII-LVSPGPIETEFTGKE  205 (282)
T ss_pred             ------------CCcccccchHHHHHHHHHHHHHHHhhccCceEEE-EEecCceeecccchh
Confidence                        5666689999999999999999999998766778 999999999976654

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=100.00  E-value=1.6e-38  Score=289.01  Aligned_cols=244  Identities=16%  Similarity=0.129  Sum_probs=195.5

Q ss_pred             CCCCCCCEEEEeCC--CChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhC-------CCC----ceEEEeccC-
Q 019722           30 CPNLSSVTAIITGA--TSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDC-------PGS----DIVVLPLDL-   95 (336)
Q Consensus        30 ~~~l~gk~~lItGg--s~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~-------~~~----~~~~~~~Dl-   95 (336)
                      .++|+||++|||||  ++|||+++|+.|+++|++|++ +|+..+++.....+++..       ++.    ....+.+|+ 
T Consensus         4 ~~~l~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   82 (303)
T PLN02730          4 PIDLRGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDAV   82 (303)
T ss_pred             CcCCCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeeccee
Confidence            35699999999999  899999999999999999999 888887777776665310       111    246788998 


Q ss_pred             -CC------------------HHHHHHHHHHHHhcCCCccEEEEcccCCC----CCCCCCchhhhhHHHHHHhHHHHHHH
Q 019722           96 -SS------------------LSSVRNFVSQFHSLNLPLNLLINNAGKFA----HQHAISEDGIEMTFATNYLGHFLLTK  152 (336)
Q Consensus        96 -~~------------------~~~v~~~~~~~~~~~~~id~lv~nAg~~~----~~~~~~~~~~~~~~~vn~~~~~~l~~  152 (336)
                       ++                  +++++++++++.+.+|++|+||||||...    +..+.+.++|++++++|+.+++.++|
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~l~~  162 (303)
T PLN02730         83 FDTPEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLLQ  162 (303)
T ss_pred             cCccccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHHHHH
Confidence             43                  34899999999999999999999997532    23667889999999999999999999


Q ss_pred             HHHHHHHHhhccCCCCCeEEEEcCCccccccCCcccccccccCCCCCCChh-hHhHHHHHHHHHHHHHHHHHHcc-CCCc
Q 019722          153 LLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDAT-RAYALSKLANVLHTKELAQRLKQ-MEAN  230 (336)
Q Consensus       153 ~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Y~~sK~a~~~l~~~la~e~~~-~g~~  230 (336)
                      +++|.|++       .|+||++||..+..+                 .+.+ ..|++||+++++|+++|+.|+++ .|  
T Consensus       163 ~~~p~m~~-------~G~II~isS~a~~~~-----------------~p~~~~~Y~asKaAl~~l~~~la~El~~~~g--  216 (303)
T PLN02730        163 HFGPIMNP-------GGASISLTYIASERI-----------------IPGYGGGMSSAKAALESDTRVLAFEAGRKYK--  216 (303)
T ss_pred             HHHHHHhc-------CCEEEEEechhhcCC-----------------CCCCchhhHHHHHHHHHHHHHHHHHhCcCCC--
Confidence            99999965       389999999877664                 4433 47999999999999999999986 67  


Q ss_pred             EEEEEeeCCceeCCCCCccchh---HHHHHHHHHHhhcCChHHHHHHHHHHHhcCccccCCceeeccCcccccc
Q 019722          231 VTVNCVHPGIVRTRLTREREGF---ITDLVFFLTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWTS  301 (336)
Q Consensus       231 I~vn~v~PG~v~T~~~~~~~~~---~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~~  301 (336)
                      ||||+|+||+++|++.+.....   ........+..+...|++++..++|+++ +.+.+++|+.+..+|+....
T Consensus       217 IrVn~V~PG~v~T~~~~~~~~~~~~~~~~~~~~pl~r~~~peevA~~~~fLaS-~~a~~itG~~l~vdGG~~~~  289 (303)
T PLN02730        217 IRVNTISAGPLGSRAAKAIGFIDDMIEYSYANAPLQKELTADEVGNAAAFLAS-PLASAITGATIYVDNGLNAM  289 (303)
T ss_pred             eEEEEEeeCCccCchhhcccccHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhC-ccccCccCCEEEECCCcccc
Confidence            9999999999999997653211   1111111233456789999999999997 77789999999888875433

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=2.1e-38  Score=284.25  Aligned_cols=237  Identities=15%  Similarity=0.145  Sum_probs=190.9

Q ss_pred             CCCCCEEEEeCC--CChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           32 NLSSVTAIITGA--TSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        32 ~l~gk~~lItGg--s~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      .++||++|||||  ++|||+++|++|+++|++|++++|... ..+..+++.++. + ...++++|++|+++++++++++.
T Consensus         3 ~l~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~-~~~~~~~~~~~~-~-~~~~~~~Dv~d~~~v~~~~~~~~   79 (260)
T PRK06997          3 FLAGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDR-FKDRITEFAAEF-G-SDLVFPCDVASDEQIDALFASLG   79 (260)
T ss_pred             ccCCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchH-HHHHHHHHHHhc-C-CcceeeccCCCHHHHHHHHHHHH
Confidence            378999999996  689999999999999999999876522 223333443332 2 23578999999999999999999


Q ss_pred             hcCCCccEEEEcccCCCCC-------CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccc
Q 019722          110 SLNLPLNLLINNAGKFAHQ-------HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWF  182 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~~~-------~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~  182 (336)
                      +.++++|++|||||+....       .+.+.++|++.+++|+.+++.++|+++|+|.+       +|+||++||..+..+
T Consensus        80 ~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~-------~g~Ii~iss~~~~~~  152 (260)
T PRK06997         80 QHWDGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSD-------DASLLTLSYLGAERV  152 (260)
T ss_pred             HHhCCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCC-------CceEEEEeccccccC
Confidence            9999999999999975421       34677899999999999999999999999943       379999999877654


Q ss_pred             cCCcccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccch---hHHHHHHH
Q 019722          183 SGDMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREG---FITDLVFF  259 (336)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~---~~~~~~~~  259 (336)
                                       .+.+.+|++||+++.+|+++++.|++++|  ||||+|+||+|+|++......   ........
T Consensus       153 -----------------~~~~~~Y~asKaal~~l~~~la~el~~~g--IrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~  213 (260)
T PRK06997        153 -----------------VPNYNTMGLAKASLEASVRYLAVSLGPKG--IRANGISAGPIKTLAASGIKDFGKILDFVESN  213 (260)
T ss_pred             -----------------CCCcchHHHHHHHHHHHHHHHHHHhcccC--eEEEEEeeCccccchhccccchhhHHHHHHhc
Confidence                             56677899999999999999999999988  999999999999987654321   11111122


Q ss_pred             HHHhhcCChHHHHHHHHHHHhcCccccCCceeeccCccc
Q 019722          260 LTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEA  298 (336)
Q Consensus       260 ~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  298 (336)
                      .+..+...|+|++..++|+++ +.+.+++|+.+..+|+.
T Consensus       214 ~p~~r~~~pedva~~~~~l~s-~~~~~itG~~i~vdgg~  251 (260)
T PRK06997        214 APLRRNVTIEEVGNVAAFLLS-DLASGVTGEITHVDSGF  251 (260)
T ss_pred             CcccccCCHHHHHHHHHHHhC-ccccCcceeEEEEcCCh
Confidence            234566789999999999987 66789999999998874

>PRK07791 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.7e-38  Score=284.75  Aligned_cols=243  Identities=24%  Similarity=0.269  Sum_probs=201.3

Q ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCCh---------HHHHHHHHHHHhhCCCCceEEEeccCCCHHHHH
Q 019722           32 NLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSL---------KAAEEAKARLASDCPGSDIVVLPLDLSSLSSVR  102 (336)
Q Consensus        32 ~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~---------~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~  102 (336)
                      .++||++|||||++|||++++++|+++|++|++++|+.         +.+++..++++..  +.++.++++|+++++++.
T Consensus         3 ~l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~Dv~~~~~v~   80 (286)
T PRK07791          3 LLDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAA--GGEAVANGDDIADWDGAA   80 (286)
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhc--CCceEEEeCCCCCHHHHH
Confidence            47899999999999999999999999999999998875         6667777777654  567889999999999999


Q ss_pred             HHHHHHHhcCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhcc-CCCCCeEEEEcCCcc
Q 019722          103 NFVSQFHSLNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKA-TGIQGRIVNVSSSIH  179 (336)
Q Consensus       103 ~~~~~~~~~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~-~~~~grIV~vsS~~~  179 (336)
                      ++++++.+.++++|+||||||+....  .+.+.++|++++++|+.+++.++|+++|+|++.... ....|+||++||.++
T Consensus        81 ~~~~~~~~~~g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~isS~~~  160 (286)
T PRK07791         81 NLVDAAVETFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAG  160 (286)
T ss_pred             HHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEEeCchhh
Confidence            99999999999999999999976532  567889999999999999999999999999764311 112479999999887


Q ss_pred             ccccCCcccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHHHHH
Q 019722          180 SWFSGDMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFF  259 (336)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~  259 (336)
                      ..+                 .+++..|++||+++++|+++++.|+++.|  ||||+|+|| +.|++....   .......
T Consensus       161 ~~~-----------------~~~~~~Y~asKaal~~l~~~la~el~~~g--IrVn~v~Pg-~~T~~~~~~---~~~~~~~  217 (286)
T PRK07791        161 LQG-----------------SVGQGNYSAAKAGIAALTLVAAAELGRYG--VTVNAIAPA-ARTRMTETV---FAEMMAK  217 (286)
T ss_pred             CcC-----------------CCCchhhHHHHHHHHHHHHHHHHHHHHhC--eEEEEECCC-CCCCcchhh---HHHHHhc
Confidence            765                 56778899999999999999999999988  999999999 899886432   1111111


Q ss_pred             HHHh--hcCChHHHHHHHHHHHhcCccccCCceeeccCccccc
Q 019722          260 LTSK--LLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWT  300 (336)
Q Consensus       260 ~~~~--~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~  300 (336)
                      ....  ...+|++++..++|+++ +...+++|+++..+|+...
T Consensus       218 ~~~~~~~~~~pedva~~~~~L~s-~~~~~itG~~i~vdgG~~~  259 (286)
T PRK07791        218 PEEGEFDAMAPENVSPLVVWLGS-AESRDVTGKVFEVEGGKIS  259 (286)
T ss_pred             CcccccCCCCHHHHHHHHHHHhC-chhcCCCCcEEEEcCCceE
Confidence            1111  24689999999999987 6678999999999987544

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=100.00  E-value=4.5e-38  Score=282.06  Aligned_cols=243  Identities=15%  Similarity=0.184  Sum_probs=200.8

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeC-ChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPAR-SLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQF  108 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~  108 (336)
                      +.+|+||++|||||++|||+++|++|+++|++|++++| +.+.++...++++... +.++.++++|++++++++++++++
T Consensus         3 ~~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~   81 (260)
T PRK08416          3 SNEMKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKY-GIKAKAYPLNILEPETYKELFKKI   81 (260)
T ss_pred             ccccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhc-CCceEEEEcCCCCHHHHHHHHHHH
Confidence            35689999999999999999999999999999998875 5666666666665432 458999999999999999999999


Q ss_pred             HhcCCCccEEEEcccCCC--------CCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccc
Q 019722          109 HSLNLPLNLLINNAGKFA--------HQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHS  180 (336)
Q Consensus       109 ~~~~~~id~lv~nAg~~~--------~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~  180 (336)
                      .+.++++|++|||||+..        +..+.+.++++..+++|+.+.+.++++++|.|.+.+     .|+||++||..+.
T Consensus        82 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-----~g~iv~isS~~~~  156 (260)
T PRK08416         82 DEDFDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVG-----GGSIISLSSTGNL  156 (260)
T ss_pred             HHhcCCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccC-----CEEEEEEeccccc
Confidence            999999999999998642        124566788999999999999999999999998754     4799999998765


Q ss_pred             cccCCcccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchh---HHHHH
Q 019722          181 WFSGDMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGF---ITDLV  257 (336)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~---~~~~~  257 (336)
                      .+                 .+.+..|++||++++.++++++.|+.+.|  |+||+|+||+++|++.+.....   .....
T Consensus       157 ~~-----------------~~~~~~Y~asK~a~~~~~~~la~el~~~g--i~v~~v~PG~i~T~~~~~~~~~~~~~~~~~  217 (260)
T PRK08416        157 VY-----------------IENYAGHGTSKAAVETMVKYAATELGEKN--IRVNAVSGGPIDTDALKAFTNYEEVKAKTE  217 (260)
T ss_pred             cC-----------------CCCcccchhhHHHHHHHHHHHHHHhhhhC--eEEEEEeeCcccChhhhhccCCHHHHHHHH
Confidence            54                 55667899999999999999999999887  9999999999999986643221   11111


Q ss_pred             HHHHHhhcCChHHHHHHHHHHHhcCccccCCceeeccCccc
Q 019722          258 FFLTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEA  298 (336)
Q Consensus       258 ~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  298 (336)
                      ...+..+...|++++..++|+++ +...+++|+.+..+|+.
T Consensus       218 ~~~~~~r~~~p~~va~~~~~l~~-~~~~~~~G~~i~vdgg~  257 (260)
T PRK08416        218 ELSPLNRMGQPEDLAGACLFLCS-EKASWLTGQTIVVDGGT  257 (260)
T ss_pred             hcCCCCCCCCHHHHHHHHHHHcC-hhhhcccCcEEEEcCCe
Confidence            12233456789999999999986 66789999999888764

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=5.2e-38  Score=281.04  Aligned_cols=237  Identities=20%  Similarity=0.162  Sum_probs=191.0

Q ss_pred             CCCCCCCEEEEeCC--CChHHHHHHHHHHHCCCEEEEeeCCh--HHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHH
Q 019722           30 CPNLSSVTAIITGA--TSGIGAETARVLAKRGARLVLPARSL--KAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFV  105 (336)
Q Consensus        30 ~~~l~gk~~lItGg--s~gIG~aia~~L~~~G~~V~~~~r~~--~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~  105 (336)
                      +.+++||+++||||  ++|||++++++|+++|++|++++|+.  +..+++.+++     +.++.++++|+++++++++++
T Consensus         2 ~~~~~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~i~~~~   76 (256)
T PRK07889          2 MGLLEGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRL-----PEPAPVLELDVTNEEHLASLA   76 (256)
T ss_pred             cccccCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhc-----CCCCcEEeCCCCCHHHHHHHH
Confidence            34588999999999  89999999999999999999999864  2233333322     236788999999999999999


Q ss_pred             HHHHhcCCCccEEEEcccCCCC------CCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCcc
Q 019722          106 SQFHSLNLPLNLLINNAGKFAH------QHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIH  179 (336)
Q Consensus       106 ~~~~~~~~~id~lv~nAg~~~~------~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~  179 (336)
                      +++.+.++++|++|||||+...      ..+.+.++|++++++|+.+++.++++++|.|++       +|+||++++.. 
T Consensus        77 ~~~~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~-------~g~Iv~is~~~-  148 (256)
T PRK07889         77 DRVREHVDGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNE-------GGSIVGLDFDA-  148 (256)
T ss_pred             HHHHHHcCCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhccc-------CceEEEEeecc-
Confidence            9999989999999999997632      245577889999999999999999999999964       37999998653 


Q ss_pred             ccccCCcccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchh---HHHH
Q 019722          180 SWFSGDMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGF---ITDL  256 (336)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~---~~~~  256 (336)
                      ..+                 .+.+..|++||+++.+|+++++.|+.+.|  ||||+|+||+++|++.+.....   ....
T Consensus       149 ~~~-----------------~~~~~~Y~asKaal~~l~~~la~el~~~g--Irvn~v~PG~v~T~~~~~~~~~~~~~~~~  209 (256)
T PRK07889        149 TVA-----------------WPAYDWMGVAKAALESTNRYLARDLGPRG--IRVNLVAAGPIRTLAAKAIPGFELLEEGW  209 (256)
T ss_pred             ccc-----------------CCccchhHHHHHHHHHHHHHHHHHhhhcC--eEEEeeccCcccChhhhcccCcHHHHHHH
Confidence            222                 45667899999999999999999999888  9999999999999986643211   1111


Q ss_pred             HHHHHHh-hcCChHHHHHHHHHHHhcCccccCCceeeccCcccc
Q 019722          257 VFFLTSK-LLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAW  299 (336)
Q Consensus       257 ~~~~~~~-~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  299 (336)
                      ....+.. +..+|+|+|..++|+++ +...+++|+++..+|+..
T Consensus       210 ~~~~p~~~~~~~p~evA~~v~~l~s-~~~~~~tG~~i~vdgg~~  252 (256)
T PRK07889        210 DERAPLGWDVKDPTPVARAVVALLS-DWFPATTGEIVHVDGGAH  252 (256)
T ss_pred             HhcCccccccCCHHHHHHHHHHHhC-cccccccceEEEEcCcee
Confidence            1122222 46789999999999987 667899999999888743

>PRK08265 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.7e-37  Score=278.47  Aligned_cols=238  Identities=21%  Similarity=0.209  Sum_probs=199.8

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHh
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHS  110 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  110 (336)
                      .++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++     +.++.++++|+++++++.++++++.+
T Consensus         2 ~~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dl~~~~~~~~~~~~~~~   76 (261)
T PRK08265          2 IGLAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASL-----GERARFIATDITDDAAIERAVATVVA   76 (261)
T ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCeeEEEEecCCCHHHHHHHHHHHHH
Confidence            4588999999999999999999999999999999999988776665554     45789999999999999999999999


Q ss_pred             cCCCccEEEEcccCCCCC-CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcccc
Q 019722          111 LNLPLNLLINNAGKFAHQ-HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRY  189 (336)
Q Consensus       111 ~~~~id~lv~nAg~~~~~-~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~  189 (336)
                      .++++|++|||||..... .+.+.++|++.+++|+.+++.++++++|.|+ ++     .|+||++||.++..+       
T Consensus        77 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~-----~g~ii~isS~~~~~~-------  143 (261)
T PRK08265         77 RFGRVDILVNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLA-RG-----GGAIVNFTSISAKFA-------  143 (261)
T ss_pred             HhCCCCEEEECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHh-cC-----CcEEEEECchhhccC-------
Confidence            999999999999975432 4567789999999999999999999999997 32     489999999887765       


Q ss_pred             cccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHHHH-----HHHHhh
Q 019722          190 LGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVF-----FLTSKL  264 (336)
Q Consensus       190 ~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~-----~~~~~~  264 (336)
                                .+....|+++|++++.++++++.|+.+.|  |+||+|+||+++|++.............     ..+..+
T Consensus       144 ----------~~~~~~Y~asKaa~~~~~~~la~e~~~~g--i~vn~v~PG~~~t~~~~~~~~~~~~~~~~~~~~~~p~~r  211 (261)
T PRK08265        144 ----------QTGRWLYPASKAAIRQLTRSMAMDLAPDG--IRVNSVSPGWTWSRVMDELSGGDRAKADRVAAPFHLLGR  211 (261)
T ss_pred             ----------CCCCchhHHHHHHHHHHHHHHHHHhcccC--EEEEEEccCCccChhhhhhcccchhHHHHhhcccCCCCC
Confidence                      45667899999999999999999999877  9999999999999987543211111111     122345


Q ss_pred             cCChHHHHHHHHHHHhcCccccCCceeeccCcccc
Q 019722          265 LKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAW  299 (336)
Q Consensus       265 ~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  299 (336)
                      ..+|+|++..++|+++ +...+++|+.+..+|+..
T Consensus       212 ~~~p~dva~~~~~l~s-~~~~~~tG~~i~vdgg~~  245 (261)
T PRK08265        212 VGDPEEVAQVVAFLCS-DAASFVTGADYAVDGGYS  245 (261)
T ss_pred             ccCHHHHHHHHHHHcC-ccccCccCcEEEECCCee
Confidence            6789999999999986 667899999999988743

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=2.7e-37  Score=275.92  Aligned_cols=242  Identities=23%  Similarity=0.273  Sum_probs=206.1

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      .+++++|++|||||++|||++++++|+++|++|++++|+.+++++..++++..  +.++.++.+|+++++++..+++++.
T Consensus         4 ~~~l~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~   81 (254)
T PRK08085          4 LFSLAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQE--GIKAHAAPFNVTHKQEVEAAIEHIE   81 (254)
T ss_pred             cccCCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhc--CCeEEEEecCCCCHHHHHHHHHHHH
Confidence            46789999999999999999999999999999999999998888888777654  4578899999999999999999999


Q ss_pred             hcCCCccEEEEcccCCCC--CCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcc
Q 019722          110 SLNLPLNLLINNAGKFAH--QHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMI  187 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~  187 (336)
                      +.++++|++|||||....  ..+.+.++|++++++|+.+++.+++++.+.+.+++     .++||++||..+..+     
T Consensus        82 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-----~~~iv~isS~~~~~~-----  151 (254)
T PRK08085         82 KDIGPIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQ-----AGKIINICSMQSELG-----  151 (254)
T ss_pred             HhcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-----CcEEEEEccchhccC-----
Confidence            989999999999997543  25677889999999999999999999999997654     489999999876655     


Q ss_pred             cccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccch---hHHHHHHHHHHhh
Q 019722          188 RYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREG---FITDLVFFLTSKL  264 (336)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~---~~~~~~~~~~~~~  264 (336)
                                  .+....|+++|++++.++++++.++.+.|  |+||+|+||+++|++.+....   .........+..+
T Consensus       152 ------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~pG~~~t~~~~~~~~~~~~~~~~~~~~p~~~  217 (254)
T PRK08085        152 ------------RDTITPYAASKGAVKMLTRGMCVELARHN--IQVNGIAPGYFKTEMTKALVEDEAFTAWLCKRTPAAR  217 (254)
T ss_pred             ------------CCCCcchHHHHHHHHHHHHHHHHHHHhhC--eEEEEEEeCCCCCcchhhhccCHHHHHHHHhcCCCCC
Confidence                        45567899999999999999999999888  999999999999998765321   1111122233455


Q ss_pred             cCChHHHHHHHHHHHhcCccccCCceeeccCccc
Q 019722          265 LKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEA  298 (336)
Q Consensus       265 ~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  298 (336)
                      ...|+|++.+++|+++ +.+.+++|+.+..+|+.
T Consensus       218 ~~~~~~va~~~~~l~~-~~~~~i~G~~i~~dgg~  250 (254)
T PRK08085        218 WGDPQELIGAAVFLSS-KASDFVNGHLLFVDGGM  250 (254)
T ss_pred             CcCHHHHHHHHHHHhC-ccccCCcCCEEEECCCe
Confidence            6789999999999987 77889999999888874

>PLN00015 protochlorophyllide reductase

Probab=100.00  E-value=7.7e-37  Score=280.67  Aligned_cols=276  Identities=30%  Similarity=0.419  Sum_probs=213.0

Q ss_pred             EEeCCCChHHHHHHHHHHHCC-CEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCCCccE
Q 019722           39 IITGATSGIGAETARVLAKRG-ARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLPLNL  117 (336)
Q Consensus        39 lItGgs~gIG~aia~~L~~~G-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~  117 (336)
                      |||||++|||++++++|+++| ++|++++|+.+++++..+++...  +.++.++++|+++.++++++++++.+.++++|+
T Consensus         1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~   78 (308)
T PLN00015          1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMP--KDSYTVMHLDLASLDSVRQFVDNFRRSGRPLDV   78 (308)
T ss_pred             CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcCC--CCeEEEEEecCCCHHHHHHHHHHHHhcCCCCCE
Confidence            699999999999999999999 99999999998887777776432  457889999999999999999999888889999


Q ss_pred             EEEcccCCCC---CCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccC-----Ccccc
Q 019722          118 LINNAGKFAH---QHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSG-----DMIRY  189 (336)
Q Consensus       118 lv~nAg~~~~---~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~-----~~~~~  189 (336)
                      ||||||+...   ..+.+.++|++++++|+.|++.++++++|.|.+++   ..+|+||++||.++.....     ....+
T Consensus        79 lInnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~---~~~g~IV~vsS~~~~~~~~~~~~~~~~~~  155 (308)
T PLN00015         79 LVCNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSD---YPSKRLIIVGSITGNTNTLAGNVPPKANL  155 (308)
T ss_pred             EEECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC---CCCCEEEEEeccccccccccccCCCccch
Confidence            9999997543   24567899999999999999999999999998753   0137999999987643210     00000


Q ss_pred             cccc---c----------CCCCCCChhhHhHHHHHHHHHHHHHHHHHHcc-CCCcEEEEEeeCCce-eCCCCCccchhHH
Q 019722          190 LGQI---S----------RNKSHYDATRAYALSKLANVLHTKELAQRLKQ-MEANVTVNCVHPGIV-RTRLTREREGFIT  254 (336)
Q Consensus       190 ~~~~---~----------~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~-~g~~I~vn~v~PG~v-~T~~~~~~~~~~~  254 (336)
                      .+..   .          .+...+.+..+|++||+++..+++.+++++.. .|  |+||+|+||+| .|+|.+.......
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~SK~a~~~~~~~la~~~~~~~g--i~v~~v~PG~v~~t~~~~~~~~~~~  233 (308)
T PLN00015        156 GDLRGLAGGLNGLNSSAMIDGGEFDGAKAYKDSKVCNMLTMQEFHRRYHEETG--ITFASLYPGCIATTGLFREHIPLFR  233 (308)
T ss_pred             hhhhhhhcccCCccchhhccccCCcHHHHHhHhHHHHHHHHHHHHHhhcccCC--eEEEEecCCcccCccccccccHHHH
Confidence            0000   0          00112456788999999999999999999965 46  99999999999 7999765432211


Q ss_pred             HH---HHHHHHhhcCChHHHHHHHHHHHhcCccccCCceeeccCcc-----cccccCCCCHHHHHHHHHHHHHhhc
Q 019722          255 DL---VFFLTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNE-----AWTSKLGSNSNEASRLWAASELLVS  322 (336)
Q Consensus       255 ~~---~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~-----~~~~~~~~~~~~~~~~w~~~~~~~~  322 (336)
                      ..   ..........+|+++|..++++++++ ....+|+|+..++.     ..+++...|.+..+++|++++++++
T Consensus       234 ~~~~~~~~~~~~~~~~pe~~a~~~~~l~~~~-~~~~~G~~~~~~g~~~~~~~~~~~~a~d~~~~~~lw~~~~~~~~  308 (308)
T PLN00015        234 LLFPPFQKYITKGYVSEEEAGKRLAQVVSDP-SLTKSGVYWSWNGGSASFENQLSQEASDAEKAKKVWEISEKLVG  308 (308)
T ss_pred             HHHHHHHHHHhcccccHHHhhhhhhhhcccc-ccCCCccccccCCcccccccCcChhhcCHHHHHHHHHHHHHhcC
Confidence            11   11223334678999999999998854 45689999987764     3566778899999999999998864

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=100.00  E-value=3.7e-37  Score=275.04  Aligned_cols=241  Identities=19%  Similarity=0.214  Sum_probs=199.4

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      .++++||++|||||++|||++++++|+++|++|++++++..  ++..++++..  +.++.++++|+++.++++++++++.
T Consensus         5 ~~~l~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~--~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~   80 (253)
T PRK08993          5 AFSLEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEP--TETIEQVTAL--GRRFLSLTADLRKIDGIPALLERAV   80 (253)
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcch--HHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHH
Confidence            56799999999999999999999999999999998887643  3344444433  4578999999999999999999999


Q ss_pred             hcCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcc
Q 019722          110 SLNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMI  187 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~  187 (336)
                      +.++++|++|||||.....  .+.+.++|++++++|+.+++.+++++.|.|.+++.    +|+||++||..+..+     
T Consensus        81 ~~~~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~----~g~iv~isS~~~~~~-----  151 (253)
T PRK08993         81 AEFGHIDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGN----GGKIINIASMLSFQG-----  151 (253)
T ss_pred             HHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCC----CeEEEEECchhhccC-----
Confidence            9999999999999976432  56678899999999999999999999999977531    479999999876654     


Q ss_pred             cccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccch---hHHHHHHHHHHhh
Q 019722          188 RYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREG---FITDLVFFLTSKL  264 (336)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~---~~~~~~~~~~~~~  264 (336)
                                  .+....|+.+|+++++++++++.++.+.|  |+||+|+||+++|++......   .........+..+
T Consensus       152 ------------~~~~~~Y~~sKaa~~~~~~~la~e~~~~g--i~v~~v~pG~v~T~~~~~~~~~~~~~~~~~~~~p~~r  217 (253)
T PRK08993        152 ------------GIRVPSYTASKSGVMGVTRLMANEWAKHN--INVNAIAPGYMATNNTQQLRADEQRSAEILDRIPAGR  217 (253)
T ss_pred             ------------CCCCcchHHHHHHHHHHHHHHHHHhhhhC--eEEEEEeeCcccCcchhhhccchHHHHHHHhcCCCCC
Confidence                        44556899999999999999999999888  999999999999998764321   1112222334455


Q ss_pred             cCChHHHHHHHHHHHhcCccccCCceeeccCccc
Q 019722          265 LKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEA  298 (336)
Q Consensus       265 ~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  298 (336)
                      ...|+|++..++|+++ +...+++|+.+..+|+.
T Consensus       218 ~~~p~eva~~~~~l~s-~~~~~~~G~~~~~dgg~  250 (253)
T PRK08993        218 WGLPSDLMGPVVFLAS-SASDYINGYTIAVDGGW  250 (253)
T ss_pred             CcCHHHHHHHHHHHhC-ccccCccCcEEEECCCE
Confidence            6789999999999997 76789999999888764

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=100.00  E-value=2.2e-36  Score=278.25  Aligned_cols=282  Identities=30%  Similarity=0.422  Sum_probs=216.7

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCC-CEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcC
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRG-ARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLN  112 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  112 (336)
                      .+|++|||||++|||++++++|+++| ++|++++|+.++.++..+++...  +.++.++.+|+++.++++++++++.+.+
T Consensus         2 ~~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   79 (314)
T TIGR01289         2 QKPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMP--KDSYTIMHLDLGSLDSVRQFVQQFRESG   79 (314)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCC--CCeEEEEEcCCCCHHHHHHHHHHHHHhC
Confidence            47899999999999999999999999 99999999998888777776432  4578899999999999999999998888


Q ss_pred             CCccEEEEcccCCCCC---CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccC-----
Q 019722          113 LPLNLLINNAGKFAHQ---HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSG-----  184 (336)
Q Consensus       113 ~~id~lv~nAg~~~~~---~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~-----  184 (336)
                      +++|++|||||+....   ...+.++|+.++++|+.+++.++++++|.|++.+.   ..++||++||..+.....     
T Consensus        80 ~~iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~---~~g~IV~vsS~~~~~~~~~~~~~  156 (314)
T TIGR01289        80 RPLDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPN---KDKRLIIVGSITGNTNTLAGNVP  156 (314)
T ss_pred             CCCCEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCC---CCCeEEEEecCccccccCCCcCC
Confidence            8999999999975432   34578899999999999999999999999986521   137999999987653210     


Q ss_pred             Ccccccccc-----------cCCCCCCChhhHhHHHHHHHHHHHHHHHHHHc-cCCCcEEEEEeeCCce-eCCCCCccch
Q 019722          185 DMIRYLGQI-----------SRNKSHYDATRAYALSKLANVLHTKELAQRLK-QMEANVTVNCVHPGIV-RTRLTREREG  251 (336)
Q Consensus       185 ~~~~~~~~~-----------~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~-~~g~~I~vn~v~PG~v-~T~~~~~~~~  251 (336)
                      ...++.+..           ......+.++.+|++||+++..+++.+++++. +.|  |+|++|+||+| .|++.+....
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~g--i~v~~v~PG~v~~T~l~~~~~~  234 (314)
T TIGR01289       157 PKANLGDLSGLAAGFKAPIAMIDGKEFKGAKAYKDSKVCNMLTVRELHRRFHDETG--ITFASLYPGCIADTGLFREHVP  234 (314)
T ss_pred             CcccccccccccccCCCcccccCCCCcchhhhHHHhHHHHHHHHHHHHHHhccCCC--eEEEEecCCcccCCcccccccH
Confidence            000111100           00112345678899999999999999999985 345  99999999999 6999775332


Q ss_pred             hHHHHH---HHHHHhhcCChHHHHHHHHHHHhcCccccCCceeeccCcc-----cccccCCCCHHHHHHHHHHHHHhhcc
Q 019722          252 FITDLV---FFLTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNE-----AWTSKLGSNSNEASRLWAASELLVSR  323 (336)
Q Consensus       252 ~~~~~~---~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~-----~~~~~~~~~~~~~~~~w~~~~~~~~~  323 (336)
                      ......   .........++++.+..+++++..+.. ..+|.|+..++.     ...++...|.++++++|++++++++.
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~lw~~~~~~~~~  313 (314)
T TIGR01289       235 LFRTLFPPFQKYITKGYVSEEEAGERLAQVVSDPKL-KKSGVYWSWGNRQESFVNQLSEEVSDDSKASKMWDLSEKLVGL  313 (314)
T ss_pred             HHHHHHHHHHHHHhccccchhhhhhhhHHhhcCccc-CCCceeeecCCcccccccCCChhhcCHHHHHHHHHHHHHHhcc
Confidence            211111   111122357899999999999886554 358999976553     34566688999999999999999864

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=100.00  E-value=5.5e-37  Score=277.54  Aligned_cols=243  Identities=24%  Similarity=0.277  Sum_probs=204.3

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      .+++++|+++||||++|||++++++|+++|++|++++|+.+..++..++++..  +.++.++++|+++++++..+++++.
T Consensus         5 ~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~   82 (278)
T PRK08277          5 LFSLKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAA--GGEALAVKADVLDKESLEQARQQIL   82 (278)
T ss_pred             eeccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHH
Confidence            45689999999999999999999999999999999999988888877777654  4579999999999999999999999


Q ss_pred             hcCCCccEEEEcccCCCC-----------------CCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEE
Q 019722          110 SLNLPLNLLINNAGKFAH-----------------QHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIV  172 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~~-----------------~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV  172 (336)
                      +.++++|++|||||....                 ..+.+.++|++.+++|+.+++.++++++|.|.+.+     .++||
T Consensus        83 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-----~g~ii  157 (278)
T PRK08277         83 EDFGPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRK-----GGNII  157 (278)
T ss_pred             HHcCCCCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-----CcEEE
Confidence            989999999999996432                 13456788999999999999999999999998764     48999


Q ss_pred             EEcCCccccccCCcccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccc--
Q 019722          173 NVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRERE--  250 (336)
Q Consensus       173 ~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~--  250 (336)
                      ++||..+..+                 .+....|++||++++.++++++.++.+.|  |+||+|+||++.|++.+...  
T Consensus       158 ~isS~~~~~~-----------------~~~~~~Y~~sK~a~~~l~~~la~e~~~~g--irvn~v~Pg~v~t~~~~~~~~~  218 (278)
T PRK08277        158 NISSMNAFTP-----------------LTKVPAYSAAKAAISNFTQWLAVHFAKVG--IRVNAIAPGFFLTEQNRALLFN  218 (278)
T ss_pred             EEccchhcCC-----------------CCCCchhHHHHHHHHHHHHHHHHHhCccC--eEEEEEEeccCcCcchhhhhcc
Confidence            9999887655                 56677899999999999999999999877  99999999999999865421  


Q ss_pred             --h----hHHHHHHHHHHhhcCChHHHHHHHHHHHhcCccccCCceeeccCccc
Q 019722          251 --G----FITDLVFFLTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEA  298 (336)
Q Consensus       251 --~----~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  298 (336)
                        .    .........+..+..+|+|++.+++|+++...+.+++|+.+..+|+.
T Consensus       219 ~~~~~~~~~~~~~~~~p~~r~~~~~dva~~~~~l~s~~~~~~~tG~~i~vdgG~  272 (278)
T PRK08277        219 EDGSLTERANKILAHTPMGRFGKPEELLGTLLWLADEKASSFVTGVVLPVDGGF  272 (278)
T ss_pred             ccccchhHHHHHhccCCccCCCCHHHHHHHHHHHcCccccCCcCCCEEEECCCe
Confidence              0    11111122234566789999999999887327889999999998874

>PRK07985 oxidoreductase; Provisional

Probab=100.00  E-value=8e-37  Score=278.72  Aligned_cols=238  Identities=24%  Similarity=0.268  Sum_probs=196.6

Q ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCCh--HHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           32 NLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSL--KAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        32 ~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~--~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      +++||++|||||++|||++++++|+++|++|++++|+.  +..+++.+.+...  +.++.++.+|+++++++.++++++.
T Consensus        46 ~~~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~  123 (294)
T PRK07985         46 RLKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEEC--GRKAVLLPGDLSDEKFARSLVHEAH  123 (294)
T ss_pred             ccCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHc--CCeEEEEEccCCCHHHHHHHHHHHH
Confidence            58899999999999999999999999999999988653  3344444444332  4578899999999999999999999


Q ss_pred             hcCCCccEEEEcccCCC---CCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCc
Q 019722          110 SLNLPLNLLINNAGKFA---HQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDM  186 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~---~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~  186 (336)
                      +.++++|++|||||...   ...+.+.++|++++++|+.+++.++++++|.|.+       .++||++||..+..+    
T Consensus       124 ~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~-------~g~iv~iSS~~~~~~----  192 (294)
T PRK07985        124 KALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPK-------GASIITTSSIQAYQP----  192 (294)
T ss_pred             HHhCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhc-------CCEEEEECCchhccC----
Confidence            98999999999999643   2356788999999999999999999999999964       379999999877654    


Q ss_pred             ccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccc---hhHHHHHHHHHHh
Q 019722          187 IRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRERE---GFITDLVFFLTSK  263 (336)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~---~~~~~~~~~~~~~  263 (336)
                                   .+...+|+++|++++.++++++.|+++.|  |+||+|+||+|+|++.....   ..........+..
T Consensus       193 -------------~~~~~~Y~asKaal~~l~~~la~el~~~g--Irvn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~  257 (294)
T PRK07985        193 -------------SPHLLDYAATKAAILNYSRGLAKQVAEKG--IRVNIVAPGPIWTALQISGGQTQDKIPQFGQQTPMK  257 (294)
T ss_pred             -------------CCCcchhHHHHHHHHHHHHHHHHHHhHhC--cEEEEEECCcCccccccccCCCHHHHHHHhccCCCC
Confidence                         55667899999999999999999999888  99999999999999854211   1112222223334


Q ss_pred             hcCChHHHHHHHHHHHhcCccccCCceeeccCccc
Q 019722          264 LLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEA  298 (336)
Q Consensus       264 ~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  298 (336)
                      +...|+|++.+++|+++ +.+.+++|+.+..+|+.
T Consensus       258 r~~~pedva~~~~fL~s-~~~~~itG~~i~vdgG~  291 (294)
T PRK07985        258 RAGQPAELAPVYVYLAS-QESSYVTAEVHGVCGGE  291 (294)
T ss_pred             CCCCHHHHHHHHHhhhC-hhcCCccccEEeeCCCe
Confidence            56789999999999987 77789999999888874

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=100.00  E-value=7.4e-37  Score=273.77  Aligned_cols=241  Identities=21%  Similarity=0.266  Sum_probs=201.9

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      .++++||++|||||++|||.+++++|+++|++|++++|+ +..++..+.+...  +.++.++++|+++.+++..+++++.
T Consensus        10 ~~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~   86 (258)
T PRK06935         10 FFSLDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEKE--GRKVTFVQVDLTKPESAEKVVKEAL   86 (258)
T ss_pred             cccCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHHH
Confidence            456899999999999999999999999999999999998 5555555555433  4678999999999999999999999


Q ss_pred             hcCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcc
Q 019722          110 SLNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMI  187 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~  187 (336)
                      +.++++|++|||||.....  .+.+.++|++.+++|+.+++.++++++|+|++++     .++||++||..+..+     
T Consensus        87 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-----~g~iv~isS~~~~~~-----  156 (258)
T PRK06935         87 EEFGKIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQG-----SGKIINIASMLSFQG-----  156 (258)
T ss_pred             HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcC-----CeEEEEECCHHhccC-----
Confidence            9999999999999976432  4567789999999999999999999999998764     489999999877655     


Q ss_pred             cccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccch---hHHHHHHHHHHhh
Q 019722          188 RYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREG---FITDLVFFLTSKL  264 (336)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~---~~~~~~~~~~~~~  264 (336)
                                  .+....|+++|++++++++++++|+.+.|  |+||+|+||+++|++.+....   .........+..+
T Consensus       157 ------------~~~~~~Y~asK~a~~~~~~~la~e~~~~g--i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~  222 (258)
T PRK06935        157 ------------GKFVPAYTASKHGVAGLTKAFANELAAYN--IQVNAIAPGYIKTANTAPIRADKNRNDEILKRIPAGR  222 (258)
T ss_pred             ------------CCCchhhHHHHHHHHHHHHHHHHHhhhhC--eEEEEEEeccccccchhhcccChHHHHHHHhcCCCCC
Confidence                        45667899999999999999999999888  999999999999998654321   1111222234456


Q ss_pred             cCChHHHHHHHHHHHhcCccccCCceeeccCccc
Q 019722          265 LKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEA  298 (336)
Q Consensus       265 ~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  298 (336)
                      ...|+|++..++|+++ +...+++|+.+..+|+.
T Consensus       223 ~~~~~dva~~~~~l~s-~~~~~~~G~~i~~dgg~  255 (258)
T PRK06935        223 WGEPDDLMGAAVFLAS-RASDYVNGHILAVDGGW  255 (258)
T ss_pred             CCCHHHHHHHHHHHcC-hhhcCCCCCEEEECCCe
Confidence            6789999999999987 77789999999988874

>PRK07035 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1e-36  Score=271.73  Aligned_cols=242  Identities=21%  Similarity=0.294  Sum_probs=204.8

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      .+++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++...  +.++.++++|+++.+++..+++++.
T Consensus         3 ~~~l~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~   80 (252)
T PRK07035          3 LFDLTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAA--GGKAEALACHIGEMEQIDALFAHIR   80 (252)
T ss_pred             ccccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEEcCCCCHHHHHHHHHHHH
Confidence            46799999999999999999999999999999999999998888888877654  4578899999999999999999999


Q ss_pred             hcCCCccEEEEcccCCC---CCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCc
Q 019722          110 SLNLPLNLLINNAGKFA---HQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDM  186 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~---~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~  186 (336)
                      +.++++|++|||||...   +..+.+.+++++.+++|+.+++.++++++|++++..     .++||++||..+..+    
T Consensus        81 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-----~~~iv~~sS~~~~~~----  151 (252)
T PRK07035         81 ERHGRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQG-----GGSIVNVASVNGVSP----  151 (252)
T ss_pred             HHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-----CcEEEEECchhhcCC----
Confidence            99999999999999643   224567888999999999999999999999998754     489999999877654    


Q ss_pred             ccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccch---hHHHHHHHHHHh
Q 019722          187 IRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREG---FITDLVFFLTSK  263 (336)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~---~~~~~~~~~~~~  263 (336)
                                   .++...|++||++++.+++++++++.+.|  |+||+|+||.++|++......   .........+..
T Consensus       152 -------------~~~~~~Y~~sK~al~~~~~~l~~e~~~~g--i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~  216 (252)
T PRK07035        152 -------------GDFQGIYSITKAAVISMTKAFAKECAPFG--IRVNALLPGLTDTKFASALFKNDAILKQALAHIPLR  216 (252)
T ss_pred             -------------CCCCcchHHHHHHHHHHHHHHHHHHhhcC--EEEEEEeeccccCcccccccCCHHHHHHHHccCCCC
Confidence                         55667899999999999999999999888  999999999999998765421   111112222334


Q ss_pred             hcCChHHHHHHHHHHHhcCccccCCceeeccCccc
Q 019722          264 LLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEA  298 (336)
Q Consensus       264 ~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  298 (336)
                      +..+|+|++..++++++ +...+++|+.+..+|+.
T Consensus       217 ~~~~~~~va~~~~~l~~-~~~~~~~g~~~~~dgg~  250 (252)
T PRK07035        217 RHAEPSEMAGAVLYLAS-DASSYTTGECLNVDGGY  250 (252)
T ss_pred             CcCCHHHHHHHHHHHhC-ccccCccCCEEEeCCCc
Confidence            56789999999999887 66788999999888763

>PRK06172 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.8e-37  Score=272.05  Aligned_cols=241  Identities=24%  Similarity=0.248  Sum_probs=205.1

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHh
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHS  110 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  110 (336)
                      +++++|+++||||++|||.+++++|+++|++|++++|+.+..++..+++...  +.++.++++|+++.+++..+++++.+
T Consensus         3 ~~l~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~   80 (253)
T PRK06172          3 MTFSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREA--GGEALFVACDVTRDAEVKALVEQTIA   80 (253)
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            5688999999999999999999999999999999999998888777777554  56799999999999999999999998


Q ss_pred             cCCCccEEEEcccCCCC---CCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcc
Q 019722          111 LNLPLNLLINNAGKFAH---QHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMI  187 (336)
Q Consensus       111 ~~~~id~lv~nAg~~~~---~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~  187 (336)
                      .++++|++|||||....   ..+.+.+++++++++|+.+++.++++++|.|.+++     .+++|++||..+..+     
T Consensus        81 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-----~~~ii~~sS~~~~~~-----  150 (253)
T PRK06172         81 AYGRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQG-----GGAIVNTASVAGLGA-----  150 (253)
T ss_pred             HhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-----CcEEEEECchhhccC-----
Confidence            89999999999997543   24667889999999999999999999999998764     479999999877665     


Q ss_pred             cccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHHHH----HHHHh
Q 019722          188 RYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVF----FLTSK  263 (336)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~----~~~~~  263 (336)
                                  .+.+..|+++|++++.++++++.++.+.|  |+||+|+||+++|++.+......+....    ..+..
T Consensus       151 ------------~~~~~~Y~~sKaa~~~~~~~la~e~~~~~--i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~  216 (253)
T PRK06172        151 ------------APKMSIYAASKHAVIGLTKSAAIEYAKKG--IRVNAVCPAVIDTDMFRRAYEADPRKAEFAAAMHPVG  216 (253)
T ss_pred             ------------CCCCchhHHHHHHHHHHHHHHHHHhcccC--eEEEEEEeCCccChhhhhhcccChHHHHHHhccCCCC
Confidence                        56677899999999999999999999877  9999999999999997764221111111    12234


Q ss_pred             hcCChHHHHHHHHHHHhcCccccCCceeeccCccc
Q 019722          264 LLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEA  298 (336)
Q Consensus       264 ~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  298 (336)
                      +..+|++++..++|+++ +...+++|+.+..+|+.
T Consensus       217 ~~~~p~~ia~~~~~l~~-~~~~~~~G~~i~~dgg~  250 (253)
T PRK06172        217 RIGKVEEVASAVLYLCS-DGASFTTGHALMVDGGA  250 (253)
T ss_pred             CccCHHHHHHHHHHHhC-ccccCcCCcEEEECCCc
Confidence            45689999999999988 55689999999988875

>PRK12747 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-36  Score=271.07  Aligned_cols=237  Identities=25%  Similarity=0.331  Sum_probs=194.3

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEee-CChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhc
Q 019722           33 LSSVTAIITGATSGIGAETARVLAKRGARLVLPA-RSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSL  111 (336)
Q Consensus        33 l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~-r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  111 (336)
                      ++||++|||||++|||++++++|+++|++|++++ |+.+..++...++...  +.++..+++|+++.+++..+++++.+.
T Consensus         2 ~~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   79 (252)
T PRK12747          2 LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSN--GGSAFSIGANLESLHGVEALYSSLDNE   79 (252)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhc--CCceEEEecccCCHHHHHHHHHHHHHH
Confidence            4689999999999999999999999999999875 6667777776666554  456888999999999999999887652


Q ss_pred             ----CC--CccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCcccccc
Q 019722          112 ----NL--PLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFS  183 (336)
Q Consensus       112 ----~~--~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~  183 (336)
                          ++  ++|+||||||+....  .+.+.++|++++++|+.+++.++++++|.|++       .|+||++||.++..+ 
T Consensus        80 ~~~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~-------~g~iv~isS~~~~~~-  151 (252)
T PRK12747         80 LQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRD-------NSRIINISSAATRIS-  151 (252)
T ss_pred             hhhhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhc-------CCeEEEECCcccccC-
Confidence                33  899999999975432  56677889999999999999999999999965       379999999987665 


Q ss_pred             CCcccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccch--hHHHHHHHH-
Q 019722          184 GDMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREG--FITDLVFFL-  260 (336)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~--~~~~~~~~~-  260 (336)
                                      .+....|++||+++++++++++.|+.+.|  ||||+|+||+|.|++.+....  ......... 
T Consensus       152 ----------------~~~~~~Y~~sKaa~~~~~~~la~e~~~~g--irvn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~  213 (252)
T PRK12747        152 ----------------LPDFIAYSMTKGAINTMTFTLAKQLGARG--ITVNAILPGFIKTDMNAELLSDPMMKQYATTIS  213 (252)
T ss_pred             ----------------CCCchhHHHHHHHHHHHHHHHHHHHhHcC--CEEEEEecCCccCchhhhcccCHHHHHHHHhcC
Confidence                            55667899999999999999999999888  999999999999998764321  111111111 


Q ss_pred             HHhhcCChHHHHHHHHHHHhcCccccCCceeeccCccc
Q 019722          261 TSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEA  298 (336)
Q Consensus       261 ~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  298 (336)
                      +..+...|+|++..++|+++ +...+++|+.+..+|+.
T Consensus       214 ~~~~~~~~~dva~~~~~l~s-~~~~~~~G~~i~vdgg~  250 (252)
T PRK12747        214 AFNRLGEVEDIADTAAFLAS-PDSRWVTGQLIDVSGGS  250 (252)
T ss_pred             cccCCCCHHHHHHHHHHHcC-ccccCcCCcEEEecCCc
Confidence            23456789999999999986 77789999999888763

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=100.00  E-value=5e-36  Score=277.01  Aligned_cols=285  Identities=30%  Similarity=0.398  Sum_probs=217.3

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      |+++++|++|||||++|||++++++|+++|++|++++|+.+++++..+++...  +.++.++++|+++.++++++++++.
T Consensus         1 m~~~~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~   78 (322)
T PRK07453          1 MSQDAKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIP--PDSYTIIHIDLGDLDSVRRFVDDFR   78 (322)
T ss_pred             CCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcc--CCceEEEEecCCCHHHHHHHHHHHH
Confidence            35678999999999999999999999999999999999998888877777432  4578999999999999999999988


Q ss_pred             hcCCCccEEEEcccCCCCC---CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCcccccc---
Q 019722          110 SLNLPLNLLINNAGKFAHQ---HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFS---  183 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~~~---~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~---  183 (336)
                      +.++++|+||||||+....   ...+.++++.++++|+.|++.++++++|.|++++.   ..+|||++||..+....   
T Consensus        79 ~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~---~~~riV~vsS~~~~~~~~~~  155 (322)
T PRK07453         79 ALGKPLDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPA---PDPRLVILGTVTANPKELGG  155 (322)
T ss_pred             HhCCCccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCC---CCceEEEEcccccCccccCC
Confidence            7778899999999976432   35577899999999999999999999999987531   12599999997654311   


Q ss_pred             ----CCccccccccc-----------CCCCCCChhhHhHHHHHHHHHHHHHHHHHHcc-CCCcEEEEEeeCCce-eCCCC
Q 019722          184 ----GDMIRYLGQIS-----------RNKSHYDATRAYALSKLANVLHTKELAQRLKQ-MEANVTVNCVHPGIV-RTRLT  246 (336)
Q Consensus       184 ----~~~~~~~~~~~-----------~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~-~g~~I~vn~v~PG~v-~T~~~  246 (336)
                          +...++++...           .+...+.+...|+.||++.+.+++.+++++.. .|  |+||+|+||.| .|++.
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~g--i~v~~v~PG~v~~t~~~  233 (322)
T PRK07453        156 KIPIPAPADLGDLSGFEAGFKAPISMADGKKFKPGKAYKDSKLCNMLTMRELHRRYHESTG--ITFSSLYPGCVADTPLF  233 (322)
T ss_pred             ccCCCCccchhhhhcchhcccccccccCccCCCccchhhHhHHHHHHHHHHHHHhhcccCC--eEEEEecCCcccCCccc
Confidence                00111111100           00112445678999999999999999999853 45  99999999999 59987


Q ss_pred             CccchhHHHHHH---HHHHhhcCChHHHHHHHHHHHhcCccccCCceeeccCcc---------cccccCCCCHHHHHHHH
Q 019722          247 REREGFITDLVF---FLTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNE---------AWTSKLGSNSNEASRLW  314 (336)
Q Consensus       247 ~~~~~~~~~~~~---~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~---------~~~~~~~~~~~~~~~~w  314 (336)
                      ++..........   ........+++..+..+++++.++.. ..+|.||..+..         ...++...|.+.++++|
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~G~y~~~~~~~~~~~~~~~~~~~~~a~d~~~~~~lw  312 (322)
T PRK07453        234 RNTPPLFQKLFPWFQKNITGGYVSQELAGERVAQVVADPEF-AQSGVHWSWGNRQKKDRKAFSQELSDRATDDDKARRLW  312 (322)
T ss_pred             ccCCHHHHHHHHHHHHHHhhceecHHHHhhHHHHhhcCccc-CCCCceeecCCCCCcCccccccccchhhcCHHHHHHHH
Confidence            764332211111   11122345778888899999887765 469999974332         23566788999999999


Q ss_pred             HHHHHhhc
Q 019722          315 AASELLVS  322 (336)
Q Consensus       315 ~~~~~~~~  322 (336)
                      ++++++++
T Consensus       313 ~~s~~~~~  320 (322)
T PRK07453        313 DLSAKLVG  320 (322)
T ss_pred             HHHHHHhC
Confidence            99999987

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=100.00  E-value=4.3e-37  Score=276.08  Aligned_cols=238  Identities=22%  Similarity=0.231  Sum_probs=196.0

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHh
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHS  110 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  110 (336)
                      +.++||++|||||++|||++++++|+++|++|++++|+.+.++++.+++     +.++.++++|++++++++.+++++.+
T Consensus         2 ~~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~   76 (263)
T PRK06200          2 GWLHGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRF-----GDHVLVVEGDVTSYADNQRAVDQTVD   76 (263)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCcceEEEccCCCHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999999988776655443     34788999999999999999999999


Q ss_pred             cCCCccEEEEcccCCCC---CCCCCchh----hhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCcccccc
Q 019722          111 LNLPLNLLINNAGKFAH---QHAISEDG----IEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFS  183 (336)
Q Consensus       111 ~~~~id~lv~nAg~~~~---~~~~~~~~----~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~  183 (336)
                      .++++|+||||||+...   ..+.+.++    |++++++|+.+++.++++++|.|++.      .|+||+++|..+..+ 
T Consensus        77 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~------~g~iv~~sS~~~~~~-  149 (263)
T PRK06200         77 AFGKLDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKAS------GGSMIFTLSNSSFYP-  149 (263)
T ss_pred             hcCCCCEEEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhc------CCEEEEECChhhcCC-
Confidence            89999999999997542   13344443    88999999999999999999998764      379999999877654 


Q ss_pred             CCcccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccc------------h
Q 019722          184 GDMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRERE------------G  251 (336)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~------------~  251 (336)
                                      .++...|++||++++.|+++++.++++ +  ||||+|+||+++|++.....            .
T Consensus       150 ----------------~~~~~~Y~~sK~a~~~~~~~la~el~~-~--Irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~  210 (263)
T PRK06200        150 ----------------GGGGPLYTASKHAVVGLVRQLAYELAP-K--IRVNGVAPGGTVTDLRGPASLGQGETSISDSPG  210 (263)
T ss_pred             ----------------CCCCchhHHHHHHHHHHHHHHHHHHhc-C--cEEEEEeCCccccCCcCccccCCCCcccccccc
Confidence                            455668999999999999999999986 4  99999999999999864210            1


Q ss_pred             hHHHHHHHHHHhhcCChHHHHHHHHHHHhcCc-cccCCceeeccCccccc
Q 019722          252 FITDLVFFLTSKLLKTIPQGAATTCYVAIHPR-LVNVSGKYFADCNEAWT  300 (336)
Q Consensus       252 ~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~-~~~~~G~~~~~~~~~~~  300 (336)
                      .........+..+..+|+|++..++|+++ +. +.+++|+.+..+|+...
T Consensus       211 ~~~~~~~~~p~~r~~~~~eva~~~~fl~s-~~~~~~itG~~i~vdgG~~~  259 (263)
T PRK06200        211 LADMIAAITPLQFAPQPEDHTGPYVLLAS-RRNSRALTGVVINADGGLGI  259 (263)
T ss_pred             hhHHhhcCCCCCCCCCHHHHhhhhhheec-ccccCcccceEEEEcCceee
Confidence            11112222344567889999999999987 55 88999999999887543

>PRK09242 tropinone reductase; Provisional

Probab=100.00  E-value=2e-36  Score=270.70  Aligned_cols=244  Identities=25%  Similarity=0.298  Sum_probs=207.6

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      +++++||+++||||++|||++++++|+++|++|++++|+.+.+++..+++....++.++.++++|+++++++..+++++.
T Consensus         4 ~~~~~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~   83 (257)
T PRK09242          4 RWRLDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVE   83 (257)
T ss_pred             ccccCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHH
Confidence            67899999999999999999999999999999999999999888888888776666789999999999999999999999


Q ss_pred             hcCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcc
Q 019722          110 SLNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMI  187 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~  187 (336)
                      +.++++|++|||||.....  .+.+.+++++.+++|+.+++.++++++|+|++++     .++||++||..+..+     
T Consensus        84 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-----~~~ii~~sS~~~~~~-----  153 (257)
T PRK09242         84 DHWDGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHA-----SSAIVNIGSVSGLTH-----  153 (257)
T ss_pred             HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-----CceEEEECccccCCC-----
Confidence            9999999999999975432  5678899999999999999999999999998764     479999999877654     


Q ss_pred             cccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccch---hHHHHHHHHHHhh
Q 019722          188 RYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREG---FITDLVFFLTSKL  264 (336)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~---~~~~~~~~~~~~~  264 (336)
                                  .+....|+++|++++.++++++.++.+.|  |+||+|+||++.|++......   .........+...
T Consensus       154 ------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~~--i~v~~i~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~  219 (257)
T PRK09242        154 ------------VRSGAPYGMTKAALLQMTRNLAVEWAEDG--IRVNAVAPWYIRTPLTSGPLSDPDYYEQVIERTPMRR  219 (257)
T ss_pred             ------------CCCCcchHHHHHHHHHHHHHHHHHHHHhC--eEEEEEEECCCCCcccccccCChHHHHHHHhcCCCCC
Confidence                        55567899999999999999999998877  999999999999998765321   1111111222344


Q ss_pred             cCChHHHHHHHHHHHhcCccccCCceeeccCccc
Q 019722          265 LKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEA  298 (336)
Q Consensus       265 ~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  298 (336)
                      ..++++++..++|+++ +...+++|+.+..+|+.
T Consensus       220 ~~~~~~va~~~~~l~~-~~~~~~~g~~i~~~gg~  252 (257)
T PRK09242        220 VGEPEEVAAAVAFLCM-PAASYITGQCIAVDGGF  252 (257)
T ss_pred             CcCHHHHHHHHHHHhC-cccccccCCEEEECCCe
Confidence            5689999999999997 66678899999888763

>PRK07831 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.7e-36  Score=270.73  Aligned_cols=243  Identities=21%  Similarity=0.206  Sum_probs=202.7

Q ss_pred             CCCCCCCEEEEeCCCC-hHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATS-GIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQF  108 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~-gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~  108 (336)
                      ...+++|+++||||+| |||+++++.|+++|++|++++|+.+++++..++++...+..++.++++|++++++++.+++++
T Consensus        12 ~~~~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   91 (262)
T PRK07831         12 HGLLAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAA   91 (262)
T ss_pred             ccccCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHH
Confidence            3457899999999985 999999999999999999999999888888777766444457899999999999999999999


Q ss_pred             HhcCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCc
Q 019722          109 HSLNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDM  186 (336)
Q Consensus       109 ~~~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~  186 (336)
                      .+.++++|++|||||.....  .+.+.++|++.+++|+.+++.++++++|.|++...    .|+||+++|..+..+    
T Consensus        92 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~----~g~iv~~ss~~~~~~----  163 (262)
T PRK07831         92 VERLGRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGH----GGVIVNNASVLGWRA----  163 (262)
T ss_pred             HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC----CcEEEEeCchhhcCC----
Confidence            88889999999999975432  56677899999999999999999999999986531    379999999877654    


Q ss_pred             ccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccc--hhHHHHHHHHHHhh
Q 019722          187 IRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRERE--GFITDLVFFLTSKL  264 (336)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~--~~~~~~~~~~~~~~  264 (336)
                                   .+....|+++|+++++++++++.|+.+.|  |+||+|+||+++|++.+...  ..........+..+
T Consensus       164 -------------~~~~~~Y~~sKaal~~~~~~la~e~~~~g--I~v~~i~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~r  228 (262)
T PRK07831        164 -------------QHGQAHYAAAKAGVMALTRCSALEAAEYG--VRINAVAPSIAMHPFLAKVTSAELLDELAAREAFGR  228 (262)
T ss_pred             -------------CCCCcchHHHHHHHHHHHHHHHHHhCccC--eEEEEEeeCCccCcccccccCHHHHHHHHhcCCCCC
Confidence                         45567899999999999999999999988  99999999999999876432  11112222223345


Q ss_pred             cCChHHHHHHHHHHHhcCccccCCceeeccCc
Q 019722          265 LKTIPQGAATTCYVAIHPRLVNVSGKYFADCN  296 (336)
Q Consensus       265 ~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~  296 (336)
                      ...|++++..++|+++ +.+.+++|+.+.+++
T Consensus       229 ~~~p~~va~~~~~l~s-~~~~~itG~~i~v~~  259 (262)
T PRK07831        229 AAEPWEVANVIAFLAS-DYSSYLTGEVVSVSS  259 (262)
T ss_pred             CcCHHHHHHHHHHHcC-chhcCcCCceEEeCC
Confidence            6689999999999887 667899999998776

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-36  Score=272.75  Aligned_cols=236  Identities=19%  Similarity=0.177  Sum_probs=197.9

Q ss_pred             EEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCCCcc
Q 019722           37 TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLPLN  116 (336)
Q Consensus        37 ~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id  116 (336)
                      ++|||||++|||++++++|+++|++|++++|+++.+++..++++..   .++.++++|++++++++++++++.+.++++|
T Consensus         2 ~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~---~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id   78 (259)
T PRK08340          2 NVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEY---GEVYAVKADLSDKDDLKNLVKEAWELLGGID   78 (259)
T ss_pred             eEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc---CCceEEEcCCCCHHHHHHHHHHHHHhcCCCC
Confidence            6999999999999999999999999999999999888888877643   3688999999999999999999999899999


Q ss_pred             EEEEcccCCCC----CCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccccccc
Q 019722          117 LLINNAGKFAH----QHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQ  192 (336)
Q Consensus       117 ~lv~nAg~~~~----~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~~  192 (336)
                      +||||||....    ..+.+.++|.+.+++|+.+++.++++++|.|.+...    .|+||++||..+..+          
T Consensus        79 ~li~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~----~g~iv~isS~~~~~~----------  144 (259)
T PRK08340         79 ALVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKM----KGVLVYLSSVSVKEP----------  144 (259)
T ss_pred             EEEECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCC----CCEEEEEeCcccCCC----------
Confidence            99999997532    245667889999999999999999999999864321    589999999877654          


Q ss_pred             ccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccch---------h----HHHHHHH
Q 019722          193 ISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREG---------F----ITDLVFF  259 (336)
Q Consensus       193 ~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~---------~----~~~~~~~  259 (336)
                             .+....|+++|+++++++++++.++.+.|  |+||+|+||+++|++.+....         .    .......
T Consensus       145 -------~~~~~~y~~sKaa~~~~~~~la~e~~~~g--I~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (259)
T PRK08340        145 -------MPPLVLADVTRAGLVQLAKGVSRTYGGKG--IRAYTVLLGSFDTPGARENLARIAEERGVSFEETWEREVLER  215 (259)
T ss_pred             -------CCCchHHHHHHHHHHHHHHHHHHHhCCCC--EEEEEeccCcccCccHHHHHHhhhhccCCchHHHHHHHHhcc
Confidence                   55677899999999999999999999887  999999999999998653110         0    0111222


Q ss_pred             HHHhhcCChHHHHHHHHHHHhcCccccCCceeeccCcccc
Q 019722          260 LTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAW  299 (336)
Q Consensus       260 ~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  299 (336)
                      .+..+...|+|++..++|+++ +.+++++|+.+..+|+..
T Consensus       216 ~p~~r~~~p~dva~~~~fL~s-~~~~~itG~~i~vdgg~~  254 (259)
T PRK08340        216 TPLKRTGRWEELGSLIAFLLS-ENAEYMLGSTIVFDGAMT  254 (259)
T ss_pred             CCccCCCCHHHHHHHHHHHcC-cccccccCceEeecCCcC
Confidence            344567789999999999998 778999999999988743

>PRK06128 oxidoreductase; Provisional

Probab=100.00  E-value=1.2e-36  Score=278.35  Aligned_cols=241  Identities=28%  Similarity=0.273  Sum_probs=198.5

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChH--HHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLK--AAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQ  107 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~--~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~  107 (336)
                      +..++||++|||||++|||++++++|+++|++|++++++.+  ..++..+.++..  +.++.++++|+++++++++++++
T Consensus        50 ~~~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~  127 (300)
T PRK06128         50 FGRLQGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAE--GRKAVALPGDLKDEAFCRQLVER  127 (300)
T ss_pred             ccccCCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHc--CCeEEEEecCCCCHHHHHHHHHH
Confidence            44688999999999999999999999999999999887643  344555555543  56789999999999999999999


Q ss_pred             HHhcCCCccEEEEcccCCCC---CCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccC
Q 019722          108 FHSLNLPLNLLINNAGKFAH---QHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSG  184 (336)
Q Consensus       108 ~~~~~~~id~lv~nAg~~~~---~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~  184 (336)
                      +.+.++++|+||||||....   ..+.+.++|++++++|+.+++.++++++|.|.+       +++||++||..+..+  
T Consensus       128 ~~~~~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-------~~~iv~~sS~~~~~~--  198 (300)
T PRK06128        128 AVKELGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPP-------GASIINTGSIQSYQP--  198 (300)
T ss_pred             HHHHhCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCc-------CCEEEEECCccccCC--
Confidence            99999999999999997532   256788999999999999999999999999864       379999999877654  


Q ss_pred             CcccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccc---hhHHHHHHHHH
Q 019722          185 DMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRERE---GFITDLVFFLT  261 (336)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~---~~~~~~~~~~~  261 (336)
                                     .+....|++||++++.|+++++.++.+.|  |+||+|+||+++|++.....   ..........+
T Consensus       199 ---------------~~~~~~Y~asK~a~~~~~~~la~el~~~g--I~v~~v~PG~i~t~~~~~~~~~~~~~~~~~~~~p  261 (300)
T PRK06128        199 ---------------SPTLLDYASTKAAIVAFTKALAKQVAEKG--IRVNAVAPGPVWTPLQPSGGQPPEKIPDFGSETP  261 (300)
T ss_pred             ---------------CCCchhHHHHHHHHHHHHHHHHHHhhhcC--cEEEEEEECcCcCCCcccCCCCHHHHHHHhcCCC
Confidence                           55667899999999999999999999888  99999999999999865321   11111111223


Q ss_pred             HhhcCChHHHHHHHHHHHhcCccccCCceeeccCcccc
Q 019722          262 SKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAW  299 (336)
Q Consensus       262 ~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  299 (336)
                      ..+...|+|++..++|+++ +...+++|+.+..+|+..
T Consensus       262 ~~r~~~p~dva~~~~~l~s-~~~~~~~G~~~~v~gg~~  298 (300)
T PRK06128        262 MKRPGQPVEMAPLYVLLAS-QESSYVTGEVFGVTGGLL  298 (300)
T ss_pred             CCCCcCHHHHHHHHHHHhC-ccccCccCcEEeeCCCEe
Confidence            3456789999999999987 667899999999988754

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=1.9e-36  Score=270.55  Aligned_cols=243  Identities=23%  Similarity=0.272  Sum_probs=206.1

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      .++++||++|||||+++||++++++|+++|++|++++|++++.++..+.++..  +.++.++++|++++++++.+++++.
T Consensus         5 ~~~~~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~--~~~~~~~~~D~~~~~~~~~~~~~~~   82 (255)
T PRK07523          5 LFDLTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQ--GLSAHALAFDVTDHDAVRAAIDAFE   82 (255)
T ss_pred             ccCCCCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc--CceEEEEEccCCCHHHHHHHHHHHH
Confidence            56789999999999999999999999999999999999998888777777654  4578999999999999999999999


Q ss_pred             hcCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcc
Q 019722          110 SLNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMI  187 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~  187 (336)
                      +.++++|++|||||.....  .+.+.++|++++++|+.+++.+++++.+.|.++.     .++||++||..+..+     
T Consensus        83 ~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-----~g~iv~iss~~~~~~-----  152 (255)
T PRK07523         83 AEIGPIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARG-----AGKIINIASVQSALA-----  152 (255)
T ss_pred             HhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhC-----CeEEEEEccchhccC-----
Confidence            9999999999999976432  5667889999999999999999999999998764     489999999876654     


Q ss_pred             cccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccch---hHHHHHHHHHHhh
Q 019722          188 RYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREG---FITDLVFFLTSKL  264 (336)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~---~~~~~~~~~~~~~  264 (336)
                                  .+++..|+++|++++.++++++.++++.|  |+||+|+||+++|++.+....   .........+..+
T Consensus       153 ------------~~~~~~y~~sK~a~~~~~~~~a~e~~~~g--i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~  218 (255)
T PRK07523        153 ------------RPGIAPYTATKGAVGNLTKGMATDWAKHG--LQCNAIAPGYFDTPLNAALVADPEFSAWLEKRTPAGR  218 (255)
T ss_pred             ------------CCCCccHHHHHHHHHHHHHHHHHHhhHhC--eEEEEEEECcccCchhhhhccCHHHHHHHHhcCCCCC
Confidence                        55677899999999999999999999888  999999999999998664321   1111222233345


Q ss_pred             cCChHHHHHHHHHHHhcCccccCCceeeccCcccc
Q 019722          265 LKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAW  299 (336)
Q Consensus       265 ~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  299 (336)
                      ...|+|+|.+++|++. +...+++|+.+..+|+..
T Consensus       219 ~~~~~dva~~~~~l~~-~~~~~~~G~~i~~~gg~~  252 (255)
T PRK07523        219 WGKVEELVGACVFLAS-DASSFVNGHVLYVDGGIT  252 (255)
T ss_pred             CcCHHHHHHHHHHHcC-chhcCccCcEEEECCCee
Confidence            6779999999999987 567889999998888754

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=100.00  E-value=1.8e-37  Score=274.99  Aligned_cols=227  Identities=29%  Similarity=0.343  Sum_probs=197.7

Q ss_pred             CCC--ChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcC-CCccEE
Q 019722           42 GAT--SGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLN-LPLNLL  118 (336)
Q Consensus        42 Ggs--~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~-~~id~l  118 (336)
                      |++  +|||+++|++|+++|++|++++|+.+++++..+++.++.+ .+  ++++|++++++++++++++.+.+ +++|+|
T Consensus         1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~-~~--~~~~D~~~~~~v~~~~~~~~~~~~g~iD~l   77 (241)
T PF13561_consen    1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEYG-AE--VIQCDLSDEESVEALFDEAVERFGGRIDIL   77 (241)
T ss_dssp             STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHTT-SE--EEESCTTSHHHHHHHHHHHHHHHCSSESEE
T ss_pred             CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHcC-Cc--eEeecCcchHHHHHHHHHHHhhcCCCeEEE
Confidence            566  9999999999999999999999999998888888887754 33  59999999999999999999998 999999


Q ss_pred             EEcccCCCC----C--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccccccc
Q 019722          119 INNAGKFAH----Q--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQ  192 (336)
Q Consensus       119 v~nAg~~~~----~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~~  192 (336)
                      |||+|....    .  .+.+.++|++.+++|+.+++.++|++.|+|.+.       |+||++||..+..+          
T Consensus        78 V~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------gsii~iss~~~~~~----------  140 (241)
T PF13561_consen   78 VNNAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKG-------GSIINISSIAAQRP----------  140 (241)
T ss_dssp             EEEEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHE-------EEEEEEEEGGGTSB----------
T ss_pred             EecccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhC-------CCcccccchhhccc----------
Confidence            999997664    1  456788999999999999999999999988774       79999999877665          


Q ss_pred             ccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHcc-CCCcEEEEEeeCCceeCCCCCccc---hhHHHHHHHHHHhhcCCh
Q 019722          193 ISRNKSHYDATRAYALSKLANVLHTKELAQRLKQ-MEANVTVNCVHPGIVRTRLTRERE---GFITDLVFFLTSKLLKTI  268 (336)
Q Consensus       193 ~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~-~g~~I~vn~v~PG~v~T~~~~~~~---~~~~~~~~~~~~~~~~~~  268 (336)
                             .+++..|+++|+++++|+|+++.|+++ +|  ||||+|+||++.|++.+...   +..+......+..+..+|
T Consensus       141 -------~~~~~~y~~sKaal~~l~r~lA~el~~~~g--IrVN~V~pG~i~t~~~~~~~~~~~~~~~~~~~~pl~r~~~~  211 (241)
T PF13561_consen  141 -------MPGYSAYSASKAALEGLTRSLAKELAPKKG--IRVNAVSPGPIETPMTERIPGNEEFLEELKKRIPLGRLGTP  211 (241)
T ss_dssp             -------STTTHHHHHHHHHHHHHHHHHHHHHGGHGT--EEEEEEEESSBSSHHHHHHHTHHHHHHHHHHHSTTSSHBEH
T ss_pred             -------CccchhhHHHHHHHHHHHHHHHHHhccccC--eeeeeecccceeccchhccccccchhhhhhhhhccCCCcCH
Confidence                   667779999999999999999999999 98  99999999999999866542   233334445556666799


Q ss_pred             HHHHHHHHHHHhcCccccCCceeeccCccc
Q 019722          269 PQGAATTCYVAIHPRLVNVSGKYFADCNEA  298 (336)
Q Consensus       269 ~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  298 (336)
                      +|+|.+++||++ +.+.++||+.+.+||+.
T Consensus       212 ~evA~~v~fL~s-~~a~~itG~~i~vDGG~  240 (241)
T PF13561_consen  212 EEVANAVLFLAS-DAASYITGQVIPVDGGF  240 (241)
T ss_dssp             HHHHHHHHHHHS-GGGTTGTSEEEEESTTG
T ss_pred             HHHHHHHHHHhC-ccccCccCCeEEECCCc
Confidence            999999999997 88899999999999874

...

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=100.00  E-value=3.5e-36  Score=268.92  Aligned_cols=241  Identities=22%  Similarity=0.247  Sum_probs=203.8

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      .+.+++|+++||||++|||++++++|+++|++|++++|+.+..+...++++..  +.++.++++|+++.+++.++++.+.
T Consensus         6 ~~~l~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~i~~~~~~~~   83 (255)
T PRK06113          6 NLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQL--GGQAFACRCDITSEQELSALADFAL   83 (255)
T ss_pred             ccCcCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHH
Confidence            45688999999999999999999999999999999999988888777777554  4578899999999999999999998


Q ss_pred             hcCCCccEEEEcccCCCCC-CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccc
Q 019722          110 SLNLPLNLLINNAGKFAHQ-HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIR  188 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~~~-~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~  188 (336)
                      +.++++|++|||||..... .+.+.+++++.+++|+.+++.+++++.|.|.+.+     .++||++||..+..+      
T Consensus        84 ~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-----~~~iv~isS~~~~~~------  152 (255)
T PRK06113         84 SKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNG-----GGVILTITSMAAENK------  152 (255)
T ss_pred             HHcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcC-----CcEEEEEecccccCC------
Confidence            8889999999999975432 4567789999999999999999999999997654     479999999887655      


Q ss_pred             ccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccc--hhHHHHHHHHHHhhcC
Q 019722          189 YLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRERE--GFITDLVFFLTSKLLK  266 (336)
Q Consensus       189 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~--~~~~~~~~~~~~~~~~  266 (336)
                                 .++...|+++|+++++++++++.++.+.|  |+||+|+||+++|++.+...  ..........+.....
T Consensus       153 -----------~~~~~~Y~~sK~a~~~~~~~la~~~~~~~--i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~  219 (255)
T PRK06113        153 -----------NINMTSYASSKAAASHLVRNMAFDLGEKN--IRVNGIAPGAILTDALKSVITPEIEQKMLQHTPIRRLG  219 (255)
T ss_pred             -----------CCCcchhHHHHHHHHHHHHHHHHHhhhhC--eEEEEEecccccccccccccCHHHHHHHHhcCCCCCCc
Confidence                       55667899999999999999999999888  99999999999999876532  1111112222234457


Q ss_pred             ChHHHHHHHHHHHhcCccccCCceeeccCcc
Q 019722          267 TIPQGAATTCYVAIHPRLVNVSGKYFADCNE  297 (336)
Q Consensus       267 ~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~  297 (336)
                      .|+|++.+++|++. +...+++|+.+..+|+
T Consensus       220 ~~~d~a~~~~~l~~-~~~~~~~G~~i~~~gg  249 (255)
T PRK06113        220 QPQDIANAALFLCS-PAASWVSGQILTVSGG  249 (255)
T ss_pred             CHHHHHHHHHHHcC-ccccCccCCEEEECCC
Confidence            89999999999986 7788999999998887

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=4.3e-36  Score=268.62  Aligned_cols=238  Identities=20%  Similarity=0.271  Sum_probs=195.9

Q ss_pred             CCCCCCEEEEeCCC--ChHHHHHHHHHHHCCCEEEEeeCC-----------hHHHHHHHHHHHhhCCCCceEEEeccCCC
Q 019722           31 PNLSSVTAIITGAT--SGIGAETARVLAKRGARLVLPARS-----------LKAAEEAKARLASDCPGSDIVVLPLDLSS   97 (336)
Q Consensus        31 ~~l~gk~~lItGgs--~gIG~aia~~L~~~G~~V~~~~r~-----------~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~   97 (336)
                      ..++||++|||||+  +|||+++|++|+++|++|++++|+           .+...+..+++++.  +.++.++++|+++
T Consensus         2 ~~l~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~~~~~~~~D~~~   79 (256)
T PRK12859          2 NQLKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKN--GVKVSSMELDLTQ   79 (256)
T ss_pred             CCcCCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhc--CCeEEEEEcCCCC
Confidence            46899999999999  599999999999999999987642           22233444445443  5689999999999


Q ss_pred             HHHHHHHHHHHHhcCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEc
Q 019722           98 LSSVRNFVSQFHSLNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVS  175 (336)
Q Consensus        98 ~~~v~~~~~~~~~~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vs  175 (336)
                      ++++.++++++.+.++++|++|||||.....  .+.+.++|++++++|+.+++.+.++++|.|.++.     .|+||++|
T Consensus        80 ~~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-----~g~iv~is  154 (256)
T PRK12859         80 NDAPKELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKS-----GGRIINMT  154 (256)
T ss_pred             HHHHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-----CeEEEEEc
Confidence            9999999999999899999999999975432  6778899999999999999999999999998654     58999999


Q ss_pred             CCccccccCCcccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHH
Q 019722          176 SSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITD  255 (336)
Q Consensus       176 S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~  255 (336)
                      |..+..+                 .+++..|+++|++++.|+++++.++.+.|  |+||+|+||+++|++...  .....
T Consensus       155 S~~~~~~-----------------~~~~~~Y~~sK~a~~~l~~~la~~~~~~~--i~v~~v~PG~i~t~~~~~--~~~~~  213 (256)
T PRK12859        155 SGQFQGP-----------------MVGELAYAATKGAIDALTSSLAAEVAHLG--ITVNAINPGPTDTGWMTE--EIKQG  213 (256)
T ss_pred             ccccCCC-----------------CCCchHHHHHHHHHHHHHHHHHHHhhhhC--eEEEEEEEccccCCCCCH--HHHHH
Confidence            9877654                 56778999999999999999999999887  999999999999997543  11111


Q ss_pred             HHHHHHHhhcCChHHHHHHHHHHHhcCccccCCceeeccCcc
Q 019722          256 LVFFLTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNE  297 (336)
Q Consensus       256 ~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~  297 (336)
                      .....+......|+|++..++++++ +...+++|+++..+|+
T Consensus       214 ~~~~~~~~~~~~~~d~a~~~~~l~s-~~~~~~~G~~i~~dgg  254 (256)
T PRK12859        214 LLPMFPFGRIGEPKDAARLIKFLAS-EEAEWITGQIIHSEGG  254 (256)
T ss_pred             HHhcCCCCCCcCHHHHHHHHHHHhC-ccccCccCcEEEeCCC
Confidence            1222233445689999999999986 6678999999998886

>PRK08643 acetoin reductase; Validated

Probab=100.00  E-value=3.1e-36  Score=269.32  Aligned_cols=240  Identities=23%  Similarity=0.247  Sum_probs=201.4

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCCC
Q 019722           35 SVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLP  114 (336)
Q Consensus        35 gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  114 (336)
                      ||++|||||++|||+++++.|+++|++|++++|+.+..++...++...  +.++.++++|+++++++.++++++.+.+++
T Consensus         2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   79 (256)
T PRK08643          2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKD--GGKAIAVKADVSDRDQVFAAVRQVVDTFGD   79 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            789999999999999999999999999999999998888877777654  457889999999999999999999998999


Q ss_pred             ccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccccccc
Q 019722          115 LNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQ  192 (336)
Q Consensus       115 id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~~  192 (336)
                      +|++|||||+....  .+.+.+++++++++|+.+++.+++.+++.|++.+.    .++||++||..+..+          
T Consensus        80 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~----~~~iv~~sS~~~~~~----------  145 (256)
T PRK08643         80 LNVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGH----GGKIINATSQAGVVG----------  145 (256)
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC----CCEEEEECccccccC----------
Confidence            99999999975432  56678899999999999999999999999976431    479999999877665          


Q ss_pred             ccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchh------------HHHHHHHH
Q 019722          193 ISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGF------------ITDLVFFL  260 (336)
Q Consensus       193 ~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~------------~~~~~~~~  260 (336)
                             .++...|+++|++++.+++.++.++.+.|  |+||+|+||++.|++.......            ........
T Consensus       146 -------~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (256)
T PRK08643        146 -------NPELAVYSSTKFAVRGLTQTAARDLASEG--ITVNAYAPGIVKTPMMFDIAHQVGENAGKPDEWGMEQFAKDI  216 (256)
T ss_pred             -------CCCCchhHHHHHHHHHHHHHHHHHhcccC--cEEEEEeeCCCcChhhhHHHhhhccccCCCchHHHHHHhccC
Confidence                   45567899999999999999999999887  9999999999999987643110            01111222


Q ss_pred             HHhhcCChHHHHHHHHHHHhcCccccCCceeeccCccccc
Q 019722          261 TSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWT  300 (336)
Q Consensus       261 ~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~  300 (336)
                      +..+..++++++..++|+++ +.+.+++|+.+..+|+..+
T Consensus       217 ~~~~~~~~~~va~~~~~L~~-~~~~~~~G~~i~vdgg~~~  255 (256)
T PRK08643        217 TLGRLSEPEDVANCVSFLAG-PDSDYITGQTIIVDGGMVF  255 (256)
T ss_pred             CCCCCcCHHHHHHHHHHHhC-ccccCccCcEEEeCCCeec
Confidence            33455689999999999987 6788999999999887543

>PRK06398 aldose dehydrogenase; Validated

Probab=100.00  E-value=1.5e-36  Score=271.93  Aligned_cols=231  Identities=22%  Similarity=0.235  Sum_probs=193.2

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      +.+|+||++|||||++|||++++++|+++|++|++++|+...             ..++.+++||++++++++++++++.
T Consensus         1 ~~~l~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~-------------~~~~~~~~~D~~~~~~i~~~~~~~~   67 (258)
T PRK06398          1 DLGLKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPS-------------YNDVDYFKVDVSNKEQVIKGIDYVI   67 (258)
T ss_pred             CCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCccc-------------cCceEEEEccCCCHHHHHHHHHHHH
Confidence            356899999999999999999999999999999999998542             1368899999999999999999999


Q ss_pred             hcCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcc
Q 019722          110 SLNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMI  187 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~  187 (336)
                      +.++++|++|||||+....  .+.+.++|++++++|+.+++.++++++|+|.+++     .++||++||..+..+     
T Consensus        68 ~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-----~g~iv~isS~~~~~~-----  137 (258)
T PRK06398         68 SKYGRIDILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQD-----KGVIINIASVQSFAV-----  137 (258)
T ss_pred             HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-----CeEEEEeCcchhccC-----
Confidence            9999999999999975432  5678899999999999999999999999998754     589999999877654     


Q ss_pred             cccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccch--------hHHHHH--
Q 019722          188 RYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREG--------FITDLV--  257 (336)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~--------~~~~~~--  257 (336)
                                  .++...|+++|++++.++++++.|+.+ +  |+||+|+||+++|++......        ......  
T Consensus       138 ------------~~~~~~Y~~sKaal~~~~~~la~e~~~-~--i~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~  202 (258)
T PRK06398        138 ------------TRNAAAYVTSKHAVLGLTRSIAVDYAP-T--IRCVAVCPGSIRTPLLEWAAELEVGKDPEHVERKIRE  202 (258)
T ss_pred             ------------CCCCchhhhhHHHHHHHHHHHHHHhCC-C--CEEEEEecCCccchHHhhhhhccccCChhhhHHHHHh
Confidence                        566778999999999999999999975 3  999999999999998654211        011111  


Q ss_pred             --HHHHHhhcCChHHHHHHHHHHHhcCccccCCceeeccCcccc
Q 019722          258 --FFLTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAW  299 (336)
Q Consensus       258 --~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  299 (336)
                        ...+..+...|+|++..++|+++ +...+++|+.+..+|+..
T Consensus       203 ~~~~~~~~~~~~p~eva~~~~~l~s-~~~~~~~G~~i~~dgg~~  245 (258)
T PRK06398        203 WGEMHPMKRVGKPEEVAYVVAFLAS-DLASFITGECVTVDGGLR  245 (258)
T ss_pred             hhhcCCcCCCcCHHHHHHHHHHHcC-cccCCCCCcEEEECCccc
Confidence              11223455689999999999987 677899999998888754

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=6.8e-36  Score=268.60  Aligned_cols=242  Identities=21%  Similarity=0.258  Sum_probs=204.4

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      -+++++|+++||||++|||++++++|+++|++|++++|+.+++++..+.++..  +.++.++++|+++++++.++++++.
T Consensus         5 ~~~~~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~   82 (265)
T PRK07097          5 LFSLKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYREL--GIEAHGYVCDVTDEDGVQAMVSQIE   82 (265)
T ss_pred             ccCCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHHH
Confidence            56789999999999999999999999999999999999998888877777654  5579999999999999999999999


Q ss_pred             hcCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcc
Q 019722          110 SLNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMI  187 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~  187 (336)
                      +.++++|+||||||.....  .+.+.+++++++++|+.+++.+++.++|+|.+.+     .++||++||..+..+     
T Consensus        83 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-----~g~iv~isS~~~~~~-----  152 (265)
T PRK07097         83 KEVGVIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKG-----HGKIINICSMMSELG-----  152 (265)
T ss_pred             HhCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcC-----CcEEEEEcCccccCC-----
Confidence            9899999999999976543  5667889999999999999999999999998754     589999999877665     


Q ss_pred             cccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccch--------hHHH-HHH
Q 019722          188 RYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREG--------FITD-LVF  258 (336)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~--------~~~~-~~~  258 (336)
                                  .+.+..|+++|++++.+++++++++.+.|  |+||+|+||++.|++......        .+.. ...
T Consensus       153 ------------~~~~~~Y~~sKaal~~l~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~  218 (265)
T PRK07097        153 ------------RETVSAYAAAKGGLKMLTKNIASEYGEAN--IQCNGIGPGYIATPQTAPLRELQADGSRHPFDQFIIA  218 (265)
T ss_pred             ------------CCCCccHHHHHHHHHHHHHHHHHHhhhcC--ceEEEEEeccccccchhhhhhccccccchhHHHHHHh
Confidence                        45677899999999999999999999888  999999999999998654321        0111 111


Q ss_pred             HHHHhhcCChHHHHHHHHHHHhcCccccCCceeeccCccc
Q 019722          259 FLTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEA  298 (336)
Q Consensus       259 ~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  298 (336)
                      ..+......|++++..+++++. +...+++|+.+..+|+.
T Consensus       219 ~~~~~~~~~~~dva~~~~~l~~-~~~~~~~g~~~~~~gg~  257 (265)
T PRK07097        219 KTPAARWGDPEDLAGPAVFLAS-DASNFVNGHILYVDGGI  257 (265)
T ss_pred             cCCccCCcCHHHHHHHHHHHhC-cccCCCCCCEEEECCCc
Confidence            1123345678999999999987 55678899999888874

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=100.00  E-value=1.3e-36  Score=272.80  Aligned_cols=239  Identities=22%  Similarity=0.260  Sum_probs=194.1

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHh
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHS  110 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  110 (336)
                      |++++|+++||||++|||++++++|+++|++|++++|+.+.++++.+.    . +.++.++++|+++.+++.++++++.+
T Consensus         1 m~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~----~-~~~~~~~~~D~~~~~~~~~~~~~~~~   75 (262)
T TIGR03325         1 MRLKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAA----H-GDAVVGVEGDVRSLDDHKEAVARCVA   75 (262)
T ss_pred             CCcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhh----c-CCceEEEEeccCCHHHHHHHHHHHHH
Confidence            468899999999999999999999999999999999998766654332    1 45788999999999999999999999


Q ss_pred             cCCCccEEEEcccCCCC---CCCCCc----hhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCcccccc
Q 019722          111 LNLPLNLLINNAGKFAH---QHAISE----DGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFS  183 (336)
Q Consensus       111 ~~~~id~lv~nAg~~~~---~~~~~~----~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~  183 (336)
                      .++++|+||||||+...   ..+.+.    ++|++++++|+.+++.++++++|.|.+.      +|+||+++|..+..+ 
T Consensus        76 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~------~g~iv~~sS~~~~~~-  148 (262)
T TIGR03325        76 AFGKIDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVAS------RGSVIFTISNAGFYP-  148 (262)
T ss_pred             HhCCCCEEEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhc------CCCEEEEeccceecC-
Confidence            89999999999997532   122232    4789999999999999999999999764      378999999877654 


Q ss_pred             CCcccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccc----h------hH
Q 019722          184 GDMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRERE----G------FI  253 (336)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~----~------~~  253 (336)
                                      .++...|++||++++.|+++++.++++ .  ||||+|+||++.|++.....    .      ..
T Consensus       149 ----------------~~~~~~Y~~sKaa~~~l~~~la~e~~~-~--irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~  209 (262)
T TIGR03325       149 ----------------NGGGPLYTAAKHAVVGLVKELAFELAP-Y--VRVNGVAPGGMSSDLRGPKSLGMADKSISTVPL  209 (262)
T ss_pred             ----------------CCCCchhHHHHHHHHHHHHHHHHhhcc-C--eEEEEEecCCCcCCCccccccccccccccccch
Confidence                            455668999999999999999999986 3  99999999999999865310    0      01


Q ss_pred             HHHH-HHHHHhhcCChHHHHHHHHHHHhcCccccCCceeeccCccccc
Q 019722          254 TDLV-FFLTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWT  300 (336)
Q Consensus       254 ~~~~-~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~  300 (336)
                      .+.. ...+..+..+|+|++..++|+++.+...+++|+.+..+|+...
T Consensus       210 ~~~~~~~~p~~r~~~p~eva~~~~~l~s~~~~~~~tG~~i~vdgg~~~  257 (262)
T TIGR03325       210 GDMLKSVLPIGRMPDAEEYTGAYVFFATRGDTVPATGAVLNYDGGMGV  257 (262)
T ss_pred             hhhhhhcCCCCCCCChHHhhhheeeeecCCCcccccceEEEecCCeee
Confidence            1111 2234556788999999999999855667899999999987443

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK06125 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.3e-36  Score=267.91  Aligned_cols=239  Identities=26%  Similarity=0.253  Sum_probs=198.9

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHh
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHS  110 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  110 (336)
                      ++++||+++||||++|||+++++.|+++|++|++++|+.+++++..+++.... +.++.++++|+++++++..++++   
T Consensus         3 ~~~~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~D~~~~~~~~~~~~~---   78 (259)
T PRK06125          3 LHLAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAH-GVDVAVHALDLSSPEAREQLAAE---   78 (259)
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhc-CCceEEEEecCCCHHHHHHHHHH---
Confidence            46789999999999999999999999999999999999988888777776543 45789999999999999888764   


Q ss_pred             cCCCccEEEEcccCCCC--CCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccc
Q 019722          111 LNLPLNLLINNAGKFAH--QHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIR  188 (336)
Q Consensus       111 ~~~~id~lv~nAg~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~  188 (336)
                       ++++|++|||||....  ..+.+.++|++++++|+.+++.++++++|.|.+++     .|+||++||..+..+      
T Consensus        79 -~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-----~g~iv~iss~~~~~~------  146 (259)
T PRK06125         79 -AGDIDILVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARG-----SGVIVNVIGAAGENP------  146 (259)
T ss_pred             -hCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-----CcEEEEecCccccCC------
Confidence             4789999999997543  26678899999999999999999999999998764     479999999877654      


Q ss_pred             ccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccc-----------hhHHHHH
Q 019722          189 YLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRERE-----------GFITDLV  257 (336)
Q Consensus       189 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~-----------~~~~~~~  257 (336)
                                 .+.+..|+++|+++++++++++.|+.+.|  |+||+|+||+++|++.....           ..+....
T Consensus       147 -----------~~~~~~y~ask~al~~~~~~la~e~~~~g--i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~  213 (259)
T PRK06125        147 -----------DADYICGSAGNAALMAFTRALGGKSLDDG--VRVVGVNPGPVATDRMLTLLKGRARAELGDESRWQELL  213 (259)
T ss_pred             -----------CCCchHhHHHHHHHHHHHHHHHHHhCccC--eEEEEEecCccccHHHHHHHHhhhhcccCCHHHHHHHh
Confidence                       45677899999999999999999999887  99999999999999744311           0111111


Q ss_pred             HHHHHhhcCChHHHHHHHHHHHhcCccccCCceeeccCcccc
Q 019722          258 FFLTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAW  299 (336)
Q Consensus       258 ~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  299 (336)
                      ...+..+..+|+|++..++|++. +.+.+++|+.+..+|+..
T Consensus       214 ~~~~~~~~~~~~~va~~~~~l~~-~~~~~~~G~~i~vdgg~~  254 (259)
T PRK06125        214 AGLPLGRPATPEEVADLVAFLAS-PRSGYTSGTVVTVDGGIS  254 (259)
T ss_pred             ccCCcCCCcCHHHHHHHHHHHcC-chhccccCceEEecCCee
Confidence            22233456789999999999986 778899999999998754

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=1.9e-36  Score=264.84  Aligned_cols=222  Identities=25%  Similarity=0.300  Sum_probs=197.2

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      .-+++|++||||||++|+|+++|.+|+++|+++++.+.+.+..++..+++++.  + +++.+.||+++.+++.+++++++
T Consensus        33 ~k~v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~--g-~~~~y~cdis~~eei~~~a~~Vk  109 (300)
T KOG1201|consen   33 LKSVSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKI--G-EAKAYTCDISDREEIYRLAKKVK  109 (300)
T ss_pred             hhhccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhc--C-ceeEEEecCCCHHHHHHHHHHHH
Confidence            45789999999999999999999999999999999999999999999998876  3 89999999999999999999999


Q ss_pred             hcCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcc
Q 019722          110 SLNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMI  187 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~  187 (336)
                      +..|.+|+||||||+....  .+.+.+++++++++|+.|+|..+|+|+|.|.+.+     +|.||+++|.+|..+     
T Consensus       110 ~e~G~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~-----~GHIV~IaS~aG~~g-----  179 (300)
T KOG1201|consen  110 KEVGDVDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENN-----NGHIVTIASVAGLFG-----  179 (300)
T ss_pred             HhcCCceEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcC-----CceEEEehhhhcccC-----
Confidence            9999999999999988765  6788899999999999999999999999999976     699999999999987     


Q ss_pred             cccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCC-cEEEEEeeCCceeCCCCCccchhHHHHHHHHHHhhcC
Q 019722          188 RYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEA-NVTVNCVHPGIVRTRLTREREGFITDLVFFLTSKLLK  266 (336)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~-~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~  266 (336)
                                  .++...|++||+|+.+|.+++..|+...+. +|+...|+|++++|+|.... ..++      .....-
T Consensus       180 ------------~~gl~~YcaSK~a~vGfhesL~~EL~~~~~~~IktTlv~P~~i~Tgmf~~~-~~~~------~l~P~L  240 (300)
T KOG1201|consen  180 ------------PAGLADYCASKFAAVGFHESLSMELRALGKDGIKTTLVCPYFINTGMFDGA-TPFP------TLAPLL  240 (300)
T ss_pred             ------------CccchhhhhhHHHHHHHHHHHHHHHHhcCCCCeeEEEEeeeeccccccCCC-CCCc------cccCCC
Confidence                        677889999999999999999999987665 59999999999999998862 1111      112345


Q ss_pred             ChHHHHHHHHHHHhcCc
Q 019722          267 TIPQGAATTCYVAIHPR  283 (336)
Q Consensus       267 ~~~~~a~~~~~l~~~~~  283 (336)
                      +|+++|+.++..+..+.
T Consensus       241 ~p~~va~~Iv~ai~~n~  257 (300)
T KOG1201|consen  241 EPEYVAKRIVEAILTNQ  257 (300)
T ss_pred             CHHHHHHHHHHHHHcCC
Confidence            78889999998887443

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.4e-36  Score=276.13  Aligned_cols=244  Identities=16%  Similarity=0.109  Sum_probs=183.0

Q ss_pred             CCCCCCCEEEEeCCC--ChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHh--------hCCCC-----ceEEEecc
Q 019722           30 CPNLSSVTAIITGAT--SGIGAETARVLAKRGARLVLPARSLKAAEEAKARLAS--------DCPGS-----DIVVLPLD   94 (336)
Q Consensus        30 ~~~l~gk~~lItGgs--~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~--------~~~~~-----~~~~~~~D   94 (336)
                      +.+++||++|||||+  +|||+++|++|+++|++|++.++.+ .+....+....        ...+.     ++..+.+|
T Consensus         3 ~~~~~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d   81 (299)
T PRK06300          3 KIDLTGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWVP-IYKIFSQSLELGKFDASRKLSNGSLLTFAKIYPMDAS   81 (299)
T ss_pred             CcCCCCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEeccc-hhhhhhhhcccccccccccccccchhhhhhHHHhhhh
Confidence            467899999999996  9999999999999999999987542 11111000000        00011     11112233


Q ss_pred             CCCH------------------HHHHHHHHHHHhcCCCccEEEEcccCCC----CCCCCCchhhhhHHHHHHhHHHHHHH
Q 019722           95 LSSL------------------SSVRNFVSQFHSLNLPLNLLINNAGKFA----HQHAISEDGIEMTFATNYLGHFLLTK  152 (336)
Q Consensus        95 l~~~------------------~~v~~~~~~~~~~~~~id~lv~nAg~~~----~~~~~~~~~~~~~~~vn~~~~~~l~~  152 (336)
                      ++++                  .+++++++++.+.+|++|+||||||...    +..+.+.++|++++++|+.|++.++|
T Consensus        82 ~~~~~~v~~~i~~~~~~~~~~~~si~~~~~~v~~~~G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~~  161 (299)
T PRK06300         82 FDTPEDVPEEIRENKRYKDLSGYTISEVAEQVKKDFGHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLLS  161 (299)
T ss_pred             cCCCEEeecccCccccccCCCHHHHHHHHHHHHHHcCCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHHHH
Confidence            3333                  3689999999999999999999998642    23678899999999999999999999


Q ss_pred             HHHHHHHHhhccCCCCCeEEEEcCCccccccCCcccccccccCCCCCCChh-hHhHHHHHHHHHHHHHHHHHHccC-CCc
Q 019722          153 LLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDAT-RAYALSKLANVLHTKELAQRLKQM-EAN  230 (336)
Q Consensus       153 ~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Y~~sK~a~~~l~~~la~e~~~~-g~~  230 (336)
                      +++|+|++       .|+||+++|..+..+                 .+.+ ..|++||+++++|+++++.|++++ |  
T Consensus       162 a~~p~m~~-------~G~ii~iss~~~~~~-----------------~p~~~~~Y~asKaAl~~lt~~la~el~~~~g--  215 (299)
T PRK06300        162 HFGPIMNP-------GGSTISLTYLASMRA-----------------VPGYGGGMSSAKAALESDTKVLAWEAGRRWG--  215 (299)
T ss_pred             HHHHHhhc-------CCeEEEEeehhhcCc-----------------CCCccHHHHHHHHHHHHHHHHHHHHhCCCCC--
Confidence            99999965       379999999877655                 4444 379999999999999999999874 7  


Q ss_pred             EEEEEeeCCceeCCCCCccc---hhHHHHHHHHHHhhcCChHHHHHHHHHHHhcCccccCCceeeccCcccccc
Q 019722          231 VTVNCVHPGIVRTRLTRERE---GFITDLVFFLTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWTS  301 (336)
Q Consensus       231 I~vn~v~PG~v~T~~~~~~~---~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~~  301 (336)
                      ||||+|+||++.|++.....   ..........+..+...|++++..++|+++ +...+++|+.+..+|+....
T Consensus       216 IrVn~V~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~~v~~L~s-~~~~~itG~~i~vdGG~~~~  288 (299)
T PRK06300        216 IRVNTISAGPLASRAGKAIGFIERMVDYYQDWAPLPEPMEAEQVGAAAAFLVS-PLASAITGETLYVDHGANVM  288 (299)
T ss_pred             eEEEEEEeCCccChhhhcccccHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhC-ccccCCCCCEEEECCCccee
Confidence            99999999999999875431   111111122233456789999999999987 67789999999999875443

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=100.00  E-value=6.9e-36  Score=265.70  Aligned_cols=240  Identities=23%  Similarity=0.257  Sum_probs=196.8

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHh
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHS  110 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  110 (336)
                      ++++||++|||||++|||.+++++|+++|++|++++|+..  .+..+.++..  +.++.++++|+++++++..+++++.+
T Consensus         1 ~~~~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~--~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   76 (248)
T TIGR01832         1 FSLEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEP--SETQQQVEAL--GRRFLSLTADLSDIEAIKALVDSAVE   76 (248)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchH--HHHHHHHHhc--CCceEEEECCCCCHHHHHHHHHHHHH
Confidence            3689999999999999999999999999999999999753  3344444333  45789999999999999999999988


Q ss_pred             cCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccc
Q 019722          111 LNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIR  188 (336)
Q Consensus       111 ~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~  188 (336)
                      .++++|++|||||.....  .+.+.++|++++++|+.+++.++++++|.|.++..    .++||++||..+..+      
T Consensus        77 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~----~g~iv~~sS~~~~~~------  146 (248)
T TIGR01832        77 EFGHIDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGR----GGKIINIASMLSFQG------  146 (248)
T ss_pred             HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCC----CeEEEEEecHHhccC------
Confidence            889999999999976543  45677899999999999999999999999976431    379999999876544      


Q ss_pred             ccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchh---HHHHHHHHHHhhc
Q 019722          189 YLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGF---ITDLVFFLTSKLL  265 (336)
Q Consensus       189 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~---~~~~~~~~~~~~~  265 (336)
                                 .+....|+++|++++.+++++++++.+.|  |+||+|+||++.|++.+.....   ........+..+.
T Consensus       147 -----------~~~~~~Y~~sKaa~~~~~~~la~e~~~~g--i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~  213 (248)
T TIGR01832       147 -----------GIRVPSYTASKHGVAGLTKLLANEWAAKG--INVNAIAPGYMATNNTQALRADEDRNAAILERIPAGRW  213 (248)
T ss_pred             -----------CCCCchhHHHHHHHHHHHHHHHHHhCccC--cEEEEEEECcCcCcchhccccChHHHHHHHhcCCCCCC
Confidence                       34456799999999999999999999877  9999999999999987643211   1112222334456


Q ss_pred             CChHHHHHHHHHHHhcCccccCCceeeccCccc
Q 019722          266 KTIPQGAATTCYVAIHPRLVNVSGKYFADCNEA  298 (336)
Q Consensus       266 ~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  298 (336)
                      ..|+++|.+++++++ +...+++|+++..+|+.
T Consensus       214 ~~~~dva~~~~~l~s-~~~~~~~G~~i~~dgg~  245 (248)
T TIGR01832       214 GTPDDIGGPAVFLAS-SASDYVNGYTLAVDGGW  245 (248)
T ss_pred             cCHHHHHHHHHHHcC-ccccCcCCcEEEeCCCE
Confidence            789999999999987 66688999999888864

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK06484 short chain dehydrogenase; Validated

Probab=100.00  E-value=6.1e-36  Score=293.69  Aligned_cols=240  Identities=23%  Similarity=0.244  Sum_probs=202.3

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHh
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHS  110 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  110 (336)
                      +.+.||++|||||++|||+++|++|+++|++|++++|+.++++++.+++     +.++..+++|++|++++.++++++.+
T Consensus       265 ~~~~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~  339 (520)
T PRK06484        265 LAESPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEAL-----GDEHLSVQADITDEAAVESAFAQIQA  339 (520)
T ss_pred             cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCceeEEEccCCCHHHHHHHHHHHHH
Confidence            4568999999999999999999999999999999999988777666544     35678899999999999999999999


Q ss_pred             cCCCccEEEEcccCCCC---CCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcc
Q 019722          111 LNLPLNLLINNAGKFAH---QHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMI  187 (336)
Q Consensus       111 ~~~~id~lv~nAg~~~~---~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~  187 (336)
                      .++++|+||||||+...   ..+.+.++|++++++|+.+++.++++++|+|.+       .|+||++||.++..+     
T Consensus       340 ~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-------~g~iv~isS~~~~~~-----  407 (520)
T PRK06484        340 RWGRLDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQ-------GGVIVNLGSIASLLA-----  407 (520)
T ss_pred             HcCCCCEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhcc-------CCEEEEECchhhcCC-----
Confidence            99999999999997632   256788999999999999999999999999932       489999999988765     


Q ss_pred             cccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccch----hHHHHHHHHHHh
Q 019722          188 RYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREG----FITDLVFFLTSK  263 (336)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~----~~~~~~~~~~~~  263 (336)
                                  .++...|+++|+++++|+++++.|+.+.|  |+||+|+||+|+|++.+....    .........+..
T Consensus       408 ------------~~~~~~Y~asKaal~~l~~~la~e~~~~g--I~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~  473 (520)
T PRK06484        408 ------------LPPRNAYCASKAAVTMLSRSLACEWAPAG--IRVNTVAPGYIETPAVLALKASGRADFDSIRRRIPLG  473 (520)
T ss_pred             ------------CCCCchhHHHHHHHHHHHHHHHHHhhhhC--eEEEEEEeCCccCchhhhhccccHHHHHHHHhcCCCC
Confidence                        56677899999999999999999999888  999999999999998764321    111122222334


Q ss_pred             hcCChHHHHHHHHHHHhcCccccCCceeeccCccccccc
Q 019722          264 LLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWTSK  302 (336)
Q Consensus       264 ~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~~~  302 (336)
                      +..+|+|++..++|+++ +...+++|+.+..+|+.....
T Consensus       474 ~~~~~~dia~~~~~l~s-~~~~~~~G~~i~vdgg~~~~~  511 (520)
T PRK06484        474 RLGDPEEVAEAIAFLAS-PAASYVNGATLTVDGGWTAFG  511 (520)
T ss_pred             CCcCHHHHHHHHHHHhC-ccccCccCcEEEECCCccCCC
Confidence            56789999999999987 667899999999998754443

>PRK08862 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.9e-36  Score=262.06  Aligned_cols=220  Identities=18%  Similarity=0.146  Sum_probs=185.3

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHh
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHS  110 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  110 (336)
                      |+++||+++||||++|||++++++|+++|++|++++|+.+++++..+++...  +.++..+++|++++++++++++++.+
T Consensus         1 ~~~~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   78 (227)
T PRK08862          1 MDIKSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSAL--TDNVYSFQLKDFSQESIRHLFDAIEQ   78 (227)
T ss_pred             CCCCCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc--CCCeEEEEccCCCHHHHHHHHHHHHH
Confidence            4789999999999999999999999999999999999999998888887664  45788899999999999999999999


Q ss_pred             cCC-CccEEEEcccCCCC---CCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCc
Q 019722          111 LNL-PLNLLINNAGKFAH---QHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDM  186 (336)
Q Consensus       111 ~~~-~id~lv~nAg~~~~---~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~  186 (336)
                      .++ ++|++|||||....   ..+.+.++|.+.+++|+.+++.+++.++|+|.++++    +|+||++||..+       
T Consensus        79 ~~g~~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~----~g~Iv~isS~~~-------  147 (227)
T PRK08862         79 QFNRAPDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNK----KGVIVNVISHDD-------  147 (227)
T ss_pred             HhCCCCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC----CceEEEEecCCC-------
Confidence            888 99999999985432   256677889999999999999999999999987532    489999999643       


Q ss_pred             ccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHHHHHHHHhhcC
Q 019722          187 IRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSKLLK  266 (336)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~  266 (336)
                                   .+.+..|+++|+++.+|+++++.|+.+.|  ||||+|+||+++|+.... ..    .+..+      
T Consensus       148 -------------~~~~~~Y~asKaal~~~~~~la~el~~~~--Irvn~v~PG~i~t~~~~~-~~----~~~~~------  201 (227)
T PRK08862        148 -------------HQDLTGVESSNALVSGFTHSWAKELTPFN--IRVGGVVPSIFSANGELD-AV----HWAEI------  201 (227)
T ss_pred             -------------CCCcchhHHHHHHHHHHHHHHHHHHhhcC--cEEEEEecCcCcCCCccC-HH----HHHHH------
Confidence                         33456799999999999999999999887  999999999999994221 11    11111      


Q ss_pred             ChHHHHHHHHHHHhcCccccCCceeec
Q 019722          267 TIPQGAATTCYVAIHPRLVNVSGKYFA  293 (336)
Q Consensus       267 ~~~~~a~~~~~l~~~~~~~~~~G~~~~  293 (336)
                       .++.+.+..|+++   ..+++|+.+.
T Consensus       202 -~~~~~~~~~~l~~---~~~~tg~~~~  224 (227)
T PRK08862        202 -QDELIRNTEYIVA---NEYFSGRVVE  224 (227)
T ss_pred             -HHHHHhheeEEEe---cccccceEEe
Confidence             1788999999986   4689998874

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=100.00  E-value=1.6e-35  Score=265.55  Aligned_cols=245  Identities=24%  Similarity=0.276  Sum_probs=201.9

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCCh-HHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSL-KAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~-~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      .++++|++|||||++|||++++++|+++|++|++++|+. +..+...++++..  +.++.++++|+++.+++.++++++.
T Consensus         3 ~~~~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~i~~~~~~~~   80 (261)
T PRK08936          3 SDLEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKA--GGEAIAVKGDVTVESDVVNLIQTAV   80 (261)
T ss_pred             cCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHc--CCeEEEEEecCCCHHHHHHHHHHHH
Confidence            458999999999999999999999999999999988854 4556666666554  5678899999999999999999999


Q ss_pred             hcCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcc
Q 019722          110 SLNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMI  187 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~  187 (336)
                      +.++++|++|||||.....  .+.+.++|++++++|+.+++.+++.+++.|.+...    .|+||++||..+..+     
T Consensus        81 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~----~g~iv~~sS~~~~~~-----  151 (261)
T PRK08936         81 KEFGTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDI----KGNIINMSSVHEQIP-----  151 (261)
T ss_pred             HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC----CcEEEEEccccccCC-----
Confidence            9899999999999975543  46678899999999999999999999999987532    489999999876554     


Q ss_pred             cccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccc-h--hHHHHHHHHHHhh
Q 019722          188 RYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRERE-G--FITDLVFFLTSKL  264 (336)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~-~--~~~~~~~~~~~~~  264 (336)
                                  .+.+..|+++|+++..++++++.++.+.|  |+||+|+||+++|++.+... .  .........+...
T Consensus       152 ------------~~~~~~Y~~sKaa~~~~~~~la~e~~~~g--i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~  217 (261)
T PRK08936        152 ------------WPLFVHYAASKGGVKLMTETLAMEYAPKG--IRVNNIGPGAINTPINAEKFADPKQRADVESMIPMGY  217 (261)
T ss_pred             ------------CCCCcccHHHHHHHHHHHHHHHHHHhhcC--eEEEEEEECcCCCCccccccCCHHHHHHHHhcCCCCC
Confidence                        56677899999999999999999999887  99999999999999865421 1  1111112223345


Q ss_pred             cCChHHHHHHHHHHHhcCccccCCceeeccCcccccc
Q 019722          265 LKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWTS  301 (336)
Q Consensus       265 ~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~~  301 (336)
                      ..+++++++.++|+++ +...+++|+++..+++....
T Consensus       218 ~~~~~~va~~~~~l~s-~~~~~~~G~~i~~d~g~~~~  253 (261)
T PRK08936        218 IGKPEEIAAVAAWLAS-SEASYVTGITLFADGGMTLY  253 (261)
T ss_pred             CcCHHHHHHHHHHHcC-cccCCccCcEEEECCCcccC
Confidence            6789999999999987 56789999999888875543

>PLN02253 xanthoxin dehydrogenase

Probab=100.00  E-value=1.3e-35  Score=268.76  Aligned_cols=242  Identities=23%  Similarity=0.235  Sum_probs=199.0

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      ..+++||++|||||++|||++++++|+++|++|++++|+.+..++..+++..   +.++.++++|++|+++++++++++.
T Consensus        13 ~~~l~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~---~~~~~~~~~Dl~d~~~~~~~~~~~~   89 (280)
T PLN02253         13 SQRLLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGG---EPNVCFFHCDVTVEDDVSRAVDFTV   89 (280)
T ss_pred             ccccCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcC---CCceEEEEeecCCHHHHHHHHHHHH
Confidence            4568899999999999999999999999999999999998777666665522   3578999999999999999999999


Q ss_pred             hcCCCccEEEEcccCCCC----CCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCC
Q 019722          110 SLNLPLNLLINNAGKFAH----QHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGD  185 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~~----~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~  185 (336)
                      +.++++|+||||||....    ..+.+.++|++++++|+.+++.+++++.|.|.+..     .|+||+++|..+..+   
T Consensus        90 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-----~g~ii~isS~~~~~~---  161 (280)
T PLN02253         90 DKFGTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLK-----KGSIVSLCSVASAIG---  161 (280)
T ss_pred             HHhCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-----CceEEEecChhhccc---
Confidence            999999999999997542    24567889999999999999999999999997654     489999999887665   


Q ss_pred             cccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccc-h--hHHHHHH----
Q 019722          186 MIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRERE-G--FITDLVF----  258 (336)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~-~--~~~~~~~----  258 (336)
                                    .+....|+++|++++.+++.++.|+.+.|  |+||+|+||++.|++..... .  .......    
T Consensus       162 --------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~  225 (280)
T PLN02253        162 --------------GLGPHAYTGSKHAVLGLTRSVAAELGKHG--IRVNCVSPYAVPTALALAHLPEDERTEDALAGFRA  225 (280)
T ss_pred             --------------CCCCcccHHHHHHHHHHHHHHHHHhhhcC--eEEEEEeeCcccccccccccccccchhhhhhhhHH
Confidence                          34456799999999999999999999887  99999999999999754321 1  0111111    


Q ss_pred             HHH-----HhhcCChHHHHHHHHHHHhcCccccCCceeeccCcccc
Q 019722          259 FLT-----SKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAW  299 (336)
Q Consensus       259 ~~~-----~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  299 (336)
                      ...     ......|+|++.+++|+++ +...+++|+.+..+|+..
T Consensus       226 ~~~~~~~l~~~~~~~~dva~~~~~l~s-~~~~~i~G~~i~vdgG~~  270 (280)
T PLN02253        226 FAGKNANLKGVELTVDDVANAVLFLAS-DEARYISGLNLMIDGGFT  270 (280)
T ss_pred             HhhcCCCCcCCCCCHHHHHHHHHhhcC-cccccccCcEEEECCchh
Confidence            111     1223679999999999987 667899999998888754

>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]

Probab=100.00  E-value=6.1e-37  Score=255.99  Aligned_cols=238  Identities=24%  Similarity=0.270  Sum_probs=204.5

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHh
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHS  110 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  110 (336)
                      ++++||.|++|||.+|||++++++|+++|..+.++..+.+. .+...++++.+|..++.|++||+++..+++++++++..
T Consensus         1 m~~tGKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En-~~a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~   79 (261)
T KOG4169|consen    1 MDLTGKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEEN-PEAIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILA   79 (261)
T ss_pred             CcccCceEEEecCCchhhHHHHHHHHHcCchheeehhhhhC-HHHHHHHhccCCCceEEEEEeccccHHHHHHHHHHHHH
Confidence            57899999999999999999999999999987777776665 55777889999999999999999999999999999999


Q ss_pred             cCCCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccccc
Q 019722          111 LNLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYL  190 (336)
Q Consensus       111 ~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~  190 (336)
                      .+|.||++||+||+.      +..+|++++++|+.|.+.-+...+|+|.+..  .+.+|-|||+||.+|..+        
T Consensus        80 ~fg~iDIlINgAGi~------~dkd~e~Ti~vNLtgvin~T~~alpyMdk~~--gG~GGiIvNmsSv~GL~P--------  143 (261)
T KOG4169|consen   80 TFGTIDILINGAGIL------DDKDWERTINVNLTGVINGTQLALPYMDKKQ--GGKGGIIVNMSSVAGLDP--------  143 (261)
T ss_pred             HhCceEEEEcccccc------cchhHHHhhccchhhhhhhhhhhhhhhhhhc--CCCCcEEEEeccccccCc--------
Confidence            999999999999986      5678999999999999999999999998864  355799999999999887        


Q ss_pred             ccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccc------hhHHHHHHHHHHhh
Q 019722          191 GQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRERE------GFITDLVFFLTSKL  264 (336)
Q Consensus       191 ~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~------~~~~~~~~~~~~~~  264 (336)
                               .+..+.|++||+++.+|+|+++...--...+|++|+||||+++|++.+...      +........+....
T Consensus       144 ---------~p~~pVY~AsKaGVvgFTRSla~~ayy~~sGV~~~avCPG~t~t~l~~~~~~~~~~~e~~~~~~~~l~~~~  214 (261)
T KOG4169|consen  144 ---------MPVFPVYAASKAGVVGFTRSLADLAYYQRSGVRFNAVCPGFTRTDLAENIDASGGYLEYSDSIKEALERAP  214 (261)
T ss_pred             ---------cccchhhhhcccceeeeehhhhhhhhHhhcCEEEEEECCCcchHHHHHHHHhcCCcccccHHHHHHHHHcc
Confidence                     788899999999999999999987544433499999999999999887762      23334444555556


Q ss_pred             cCChHHHHHHHHHHHhcCccccCCceeeccCccc
Q 019722          265 LKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEA  298 (336)
Q Consensus       265 ~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  298 (336)
                      ..++++++..++.++..+    .+|+.|..+...
T Consensus       215 ~q~~~~~a~~~v~aiE~~----~NGaiw~v~~g~  244 (261)
T KOG4169|consen  215 KQSPACCAINIVNAIEYP----KNGAIWKVDSGS  244 (261)
T ss_pred             cCCHHHHHHHHHHHHhhc----cCCcEEEEecCc
Confidence            778999999999999743    489888777654

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=100.00  E-value=1.8e-35  Score=264.54  Aligned_cols=241  Identities=23%  Similarity=0.304  Sum_probs=200.2

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      |+.+.+|++|||||++|||+++++.|+++|++|++++|+.+..++..+++     +.++.++++|+++++++..+++++.
T Consensus         1 ~~~l~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~   75 (257)
T PRK07067          1 MMRLQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEI-----GPAAIAVSLDVTRQDSIDRIVAAAV   75 (257)
T ss_pred             CCCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHh-----CCceEEEEccCCCHHHHHHHHHHHH
Confidence            45688999999999999999999999999999999999988777665554     3468899999999999999999999


Q ss_pred             hcCCCccEEEEcccCCCC--CCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcc
Q 019722          110 SLNLPLNLLINNAGKFAH--QHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMI  187 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~  187 (336)
                      +.++++|++|||||....  ..+.+.+++++++++|+.+++.+++++.+.|.++..    +++||++||..+..+     
T Consensus        76 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~----~~~iv~~sS~~~~~~-----  146 (257)
T PRK07067         76 ERFGGIDILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGR----GGKIINMASQAGRRG-----  146 (257)
T ss_pred             HHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCC----CcEEEEeCCHHhCCC-----
Confidence            989999999999997643  255678899999999999999999999999976531    479999999876665     


Q ss_pred             cccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhH--------HHHH--
Q 019722          188 RYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFI--------TDLV--  257 (336)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~--------~~~~--  257 (336)
                                  .++...|++||++++.++++++.++.+.|  |+||+|+||+++|++++......        ....  
T Consensus       147 ------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~  212 (257)
T PRK07067        147 ------------EALVSHYCATKAAVISYTQSAALALIRHG--INVNAIAPGVVDTPMWDQVDALFARYENRPPGEKKRL  212 (257)
T ss_pred             ------------CCCCchhhhhHHHHHHHHHHHHHHhcccC--eEEEEEeeCcccchhhhhhhhhhhhccCCCHHHHHHH
Confidence                        55677899999999999999999999887  99999999999999865421100        1111  


Q ss_pred             --HHHHHhhcCChHHHHHHHHHHHhcCccccCCceeeccCcccc
Q 019722          258 --FFLTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAW  299 (336)
Q Consensus       258 --~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  299 (336)
                        ...+..+...|+|+|..++++++ +...+++|+.+..+|+..
T Consensus       213 ~~~~~~~~~~~~~~dva~~~~~l~s-~~~~~~~g~~~~v~gg~~  255 (257)
T PRK07067        213 VGEAVPLGRMGVPDDLTGMALFLAS-ADADYIVAQTYNVDGGNW  255 (257)
T ss_pred             HhhcCCCCCccCHHHHHHHHHHHhC-cccccccCcEEeecCCEe
Confidence              11223455689999999999997 567789999999888743

>PRK06940 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.9e-35  Score=267.12  Aligned_cols=246  Identities=22%  Similarity=0.246  Sum_probs=190.5

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCCC
Q 019722           35 SVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLP  114 (336)
Q Consensus        35 gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  114 (336)
                      +|++||||| +|||++++++|+ +|++|++++|+.+++++..++++..  +.++.++++|+++++++.++++++ +.+++
T Consensus         2 ~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dv~d~~~i~~~~~~~-~~~g~   76 (275)
T PRK06940          2 KEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREA--GFDVSTQEVDVSSRESVKALAATA-QTLGP   76 (275)
T ss_pred             CCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEEeecCCHHHHHHHHHHH-HhcCC
Confidence            689999998 699999999996 8999999999988887777777543  457899999999999999999988 45789


Q ss_pred             ccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccC---C---ccc
Q 019722          115 LNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSG---D---MIR  188 (336)
Q Consensus       115 id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~---~---~~~  188 (336)
                      +|+||||||+..     ..++|++++++|+.+++.+++++.|.|.+       ++++|+++|.++.....   .   ...
T Consensus        77 id~li~nAG~~~-----~~~~~~~~~~vN~~g~~~l~~~~~~~m~~-------~g~iv~isS~~~~~~~~~~~~~~~~~~  144 (275)
T PRK06940         77 VTGLVHTAGVSP-----SQASPEAILKVDLYGTALVLEEFGKVIAP-------GGAGVVIASQSGHRLPALTAEQERALA  144 (275)
T ss_pred             CCEEEECCCcCC-----chhhHHHHHHHhhHHHHHHHHHHHHHHhh-------CCCEEEEEecccccCcccchhhhcccc
Confidence            999999999753     23679999999999999999999999965       36889999987765320   0   000


Q ss_pred             cccccc---C----CCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCcc-ch----hHHHH
Q 019722          189 YLGQIS---R----NKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRER-EG----FITDL  256 (336)
Q Consensus       189 ~~~~~~---~----~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~-~~----~~~~~  256 (336)
                      ..+...   .    .....+++..|++||++++.++++++.++.+.|  ||||+|+||+++|++.... ..    .....
T Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~g--Irvn~i~PG~v~T~~~~~~~~~~~~~~~~~~  222 (275)
T PRK06940        145 TTPTEELLSLPFLQPDAIEDSLHAYQIAKRANALRVMAEAVKWGERG--ARINSISPGIISTPLAQDELNGPRGDGYRNM  222 (275)
T ss_pred             ccccccccccccccccccCCccchhHHHHHHHHHHHHHHHHHHccCC--eEEEEeccCcCcCccchhhhcCCchHHHHHH
Confidence            000000   0    000013467899999999999999999999877  9999999999999986532 11    11112


Q ss_pred             HHHHHHhhcCChHHHHHHHHHHHhcCccccCCceeeccCccccc
Q 019722          257 VFFLTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWT  300 (336)
Q Consensus       257 ~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~  300 (336)
                      ....+..+...|+|+|..++|+++ +.+.+++|+.+.++|+...
T Consensus       223 ~~~~p~~r~~~peeia~~~~fL~s-~~~~~itG~~i~vdgg~~~  265 (275)
T PRK06940        223 FAKSPAGRPGTPDEIAALAEFLMG-PRGSFITGSDFLVDGGATA  265 (275)
T ss_pred             hhhCCcccCCCHHHHHHHHHHHcC-cccCcccCceEEEcCCeEE
Confidence            222334567889999999999987 7788999999999987543

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=2.1e-35  Score=263.94  Aligned_cols=237  Identities=22%  Similarity=0.237  Sum_probs=191.4

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHh
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHS  110 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  110 (336)
                      +.++||+++||||++|||++++++|+++|++|++++++.+..   .++++.    .++.++++|+++++++.++++++.+
T Consensus         3 ~~l~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~---~~~l~~----~~~~~~~~Dl~~~~~~~~~~~~~~~   75 (255)
T PRK06463          3 MRFKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENE---AKELRE----KGVFTIKCDVGNRDQVKKSKEVVEK   75 (255)
T ss_pred             CCcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHH---HHHHHh----CCCeEEEecCCCHHHHHHHHHHHHH
Confidence            457899999999999999999999999999999887765432   223322    2578899999999999999999999


Q ss_pred             cCCCccEEEEcccCCCC--CCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccc
Q 019722          111 LNLPLNLLINNAGKFAH--QHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIR  188 (336)
Q Consensus       111 ~~~~id~lv~nAg~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~  188 (336)
                      .++++|++|||||+...  ..+.+.++|++++++|+.+++.+++.++|.|++++     .++||++||..+...+     
T Consensus        76 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~-----~g~iv~isS~~~~~~~-----  145 (255)
T PRK06463         76 EFGRVDVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSK-----NGAIVNIASNAGIGTA-----  145 (255)
T ss_pred             HcCCCCEEEECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-----CcEEEEEcCHHhCCCC-----
Confidence            99999999999997543  24567889999999999999999999999998654     4899999998765321     


Q ss_pred             ccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccc--hhHHHHH----HHHHH
Q 019722          189 YLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRERE--GFITDLV----FFLTS  262 (336)
Q Consensus       189 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~--~~~~~~~----~~~~~  262 (336)
                                 .++...|++||+++++|+++++.|+.+.|  |+||+|+||+++|++.....  .......    ...+.
T Consensus       146 -----------~~~~~~Y~asKaa~~~~~~~la~e~~~~~--i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~  212 (255)
T PRK06463        146 -----------AEGTTFYAITKAGIIILTRRLAFELGKYG--IRVNAVAPGWVETDMTLSGKSQEEAEKLRELFRNKTVL  212 (255)
T ss_pred             -----------CCCccHhHHHHHHHHHHHHHHHHHhhhcC--eEEEEEeeCCCCCchhhcccCccchHHHHHHHHhCCCc
Confidence                       34566799999999999999999999887  99999999999999875321  1111111    11223


Q ss_pred             hhcCChHHHHHHHHHHHhcCccccCCceeeccCccc
Q 019722          263 KLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEA  298 (336)
Q Consensus       263 ~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  298 (336)
                      .+..+|++++..++++++ +...+++|+.+..+|+.
T Consensus       213 ~~~~~~~~va~~~~~l~s-~~~~~~~G~~~~~dgg~  247 (255)
T PRK06463        213 KTTGKPEDIANIVLFLAS-DDARYITGQVIVADGGR  247 (255)
T ss_pred             CCCcCHHHHHHHHHHHcC-hhhcCCCCCEEEECCCe
Confidence            445789999999999986 55678999999888763

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=4.4e-35  Score=261.87  Aligned_cols=243  Identities=22%  Similarity=0.269  Sum_probs=205.3

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      .++++||+++||||+++||++++++|+++|++|++++|+++.++...++++..  +.++.++.+|+++++++.++++++.
T Consensus         6 ~~~~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~   83 (256)
T PRK06124          6 RFSLAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAA--GGAAEALAFDIADEEAVAAAFARID   83 (256)
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhc--CCceEEEEccCCCHHHHHHHHHHHH
Confidence            67799999999999999999999999999999999999998888777777654  4578999999999999999999999


Q ss_pred             hcCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcc
Q 019722          110 SLNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMI  187 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~  187 (336)
                      ..++++|++|||||.....  .+.+.++|++.+++|+.+++.+++.+++.|.+++     .+++|++||..+..+     
T Consensus        84 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-----~~~iv~~ss~~~~~~-----  153 (256)
T PRK06124         84 AEHGRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQG-----YGRIIAITSIAGQVA-----  153 (256)
T ss_pred             HhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-----CcEEEEEeechhccC-----
Confidence            9899999999999976542  4567789999999999999999999999997765     489999999887665     


Q ss_pred             cccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccc---hhHHHHHHHHHHhh
Q 019722          188 RYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRERE---GFITDLVFFLTSKL  264 (336)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~---~~~~~~~~~~~~~~  264 (336)
                                  .++...|+++|++++.+++.++.|+.+.+  |+||+|+||+++|++.+...   ..........+...
T Consensus       154 ------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~~--i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~  219 (256)
T PRK06124        154 ------------RAGDAVYPAAKQGLTGLMRALAAEFGPHG--ITSNAIAPGYFATETNAAMAADPAVGPWLAQRTPLGR  219 (256)
T ss_pred             ------------CCCccHhHHHHHHHHHHHHHHHHHHHHhC--cEEEEEEECCccCcchhhhccChHHHHHHHhcCCCCC
Confidence                        55677899999999999999999999877  99999999999999855431   11111111222344


Q ss_pred             cCChHHHHHHHHHHHhcCccccCCceeeccCcccc
Q 019722          265 LKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAW  299 (336)
Q Consensus       265 ~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  299 (336)
                      ...+++++.++++++. +...+++|+++..+|+..
T Consensus       220 ~~~~~~~a~~~~~l~~-~~~~~~~G~~i~~dgg~~  253 (256)
T PRK06124        220 WGRPEEIAGAAVFLAS-PAASYVNGHVLAVDGGYS  253 (256)
T ss_pred             CCCHHHHHHHHHHHcC-cccCCcCCCEEEECCCcc
Confidence            5679999999999987 667899999998888643

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=100.00  E-value=3.2e-35  Score=263.36  Aligned_cols=237  Identities=24%  Similarity=0.265  Sum_probs=191.8

Q ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhc
Q 019722           32 NLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSL  111 (336)
Q Consensus        32 ~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  111 (336)
                      +|++|++|||||++|||++++++|+++|++|++++|+.. ..+..+++...  +.++.++++|+++++++.++++++.+.
T Consensus         5 ~~~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~-~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   81 (260)
T PRK12823          5 RFAGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSEL-VHEVAAELRAA--GGEALALTADLETYAGAQAAMAAAVEA   81 (260)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchH-HHHHHHHHHhc--CCeEEEEEEeCCCHHHHHHHHHHHHHH
Confidence            478999999999999999999999999999999999853 44555555443  457889999999999999999999998


Q ss_pred             CCCccEEEEcccCCC---CCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccc
Q 019722          112 NLPLNLLINNAGKFA---HQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIR  188 (336)
Q Consensus       112 ~~~id~lv~nAg~~~---~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~  188 (336)
                      ++++|++|||||...   +..+.+.++|++.+++|+.+++.+++.++|.|++.+     .++||++||..+. +      
T Consensus        82 ~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-----~g~iv~~sS~~~~-~------  149 (260)
T PRK12823         82 FGRIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQG-----GGAIVNVSSIATR-G------  149 (260)
T ss_pred             cCCCeEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-----CCeEEEEcCcccc-C------
Confidence            999999999999542   235678889999999999999999999999998764     4799999997643 1      


Q ss_pred             ccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCcc----------chhHHHHH-
Q 019722          189 YLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRER----------EGFITDLV-  257 (336)
Q Consensus       189 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~----------~~~~~~~~-  257 (336)
                                  .....|++||++++.|+++++.++.+.|  |+||+|+||+++|++....          ........ 
T Consensus       150 ------------~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~  215 (260)
T PRK12823        150 ------------INRVPYSAAKGGVNALTASLAFEYAEHG--IRVNAVAPGGTEAPPRRVPRNAAPQSEQEKAWYQQIVD  215 (260)
T ss_pred             ------------CCCCccHHHHHHHHHHHHHHHHHhcccC--cEEEEEecCccCCcchhhHHhhccccccccccHHHHHH
Confidence                        1234699999999999999999999877  9999999999999863210          01111111 


Q ss_pred             ---HHHHHhhcCChHHHHHHHHHHHhcCccccCCceeeccCccc
Q 019722          258 ---FFLTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEA  298 (336)
Q Consensus       258 ---~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  298 (336)
                         ...+..+...|+|++.+++|+++ +...+++|+.+..+|+.
T Consensus       216 ~~~~~~~~~~~~~~~dva~~~~~l~s-~~~~~~~g~~~~v~gg~  258 (260)
T PRK12823        216 QTLDSSLMKRYGTIDEQVAAILFLAS-DEASYITGTVLPVGGGD  258 (260)
T ss_pred             HHhccCCcccCCCHHHHHHHHHHHcC-cccccccCcEEeecCCC
Confidence               11233455689999999999987 66788999999887753

>PRK12743 oxidoreductase; Provisional

Probab=100.00  E-value=5.1e-35  Score=261.59  Aligned_cols=242  Identities=22%  Similarity=0.249  Sum_probs=199.9

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeC-ChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcC
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGARLVLPAR-SLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLN  112 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  112 (336)
                      .+|++|||||++|||++++++|+++|++|+++++ +.+.+++..+++...  +.++.++++|++++++++.+++++.+.+
T Consensus         1 ~~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   78 (256)
T PRK12743          1 MAQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSH--GVRAEIRQLDLSDLPEGAQALDKLIQRL   78 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhc--CCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence            3689999999999999999999999999998864 556666666666554  5689999999999999999999999999


Q ss_pred             CCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccccc
Q 019722          113 LPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYL  190 (336)
Q Consensus       113 ~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~  190 (336)
                      +++|++|||||.....  .+.+.+++++++++|+.+++.+++++.++|.+++.    .|+||++||..+..+        
T Consensus        79 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~----~g~ii~isS~~~~~~--------  146 (256)
T PRK12743         79 GRIDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQ----GGRIINITSVHEHTP--------  146 (256)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC----CeEEEEEeeccccCC--------
Confidence            9999999999976543  45678899999999999999999999999976431    479999999876655        


Q ss_pred             ccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHH-HHHHHHHHhhcCChH
Q 019722          191 GQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFIT-DLVFFLTSKLLKTIP  269 (336)
Q Consensus       191 ~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~-~~~~~~~~~~~~~~~  269 (336)
                               .++...|+++|++++.++++++.++.++|  |+||+|+||+++|++......... ......+..+...|+
T Consensus       147 ---------~~~~~~Y~~sK~a~~~l~~~la~~~~~~~--i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (256)
T PRK12743        147 ---------LPGASAYTAAKHALGGLTKAMALELVEHG--ILVNAVAPGAIATPMNGMDDSDVKPDSRPGIPLGRPGDTH  215 (256)
T ss_pred             ---------CCCcchhHHHHHHHHHHHHHHHHHhhhhC--eEEEEEEeCCccCccccccChHHHHHHHhcCCCCCCCCHH
Confidence                     56677899999999999999999999888  999999999999998764322111 111122234456899


Q ss_pred             HHHHHHHHHHhcCccccCCceeeccCcccccc
Q 019722          270 QGAATTCYVAIHPRLVNVSGKYFADCNEAWTS  301 (336)
Q Consensus       270 ~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~~  301 (336)
                      |++..+++++. +...+++|+++..+|+....
T Consensus       216 dva~~~~~l~~-~~~~~~~G~~~~~dgg~~~~  246 (256)
T PRK12743        216 EIASLVAWLCS-EGASYTTGQSLIVDGGFMLA  246 (256)
T ss_pred             HHHHHHHHHhC-ccccCcCCcEEEECCCcccc
Confidence            99999999986 66788999999999885433

>PRK06139 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.7e-35  Score=272.17  Aligned_cols=232  Identities=25%  Similarity=0.283  Sum_probs=194.5

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      ++++++|++|||||++|||++++++|+++|++|++++|+.+.+++..++++..  +.++.++.+|++|+++++++++++.
T Consensus         2 ~~~l~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~--g~~~~~~~~Dv~d~~~v~~~~~~~~   79 (330)
T PRK06139          2 MGPLHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRAL--GAEVLVVPTDVTDADQVKALATQAA   79 (330)
T ss_pred             CcCCCCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEeeCCCHHHHHHHHHHHH
Confidence            35688999999999999999999999999999999999999998888888764  5688899999999999999999999


Q ss_pred             hcCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcc
Q 019722          110 SLNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMI  187 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~  187 (336)
                      +.++++|++|||||+....  .+.+.+++++++++|+.+++.+++.++|+|++++     .|+||+++|..+..+     
T Consensus        80 ~~~g~iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~-----~g~iV~isS~~~~~~-----  149 (330)
T PRK06139         80 SFGGRIDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQG-----HGIFINMISLGGFAA-----  149 (330)
T ss_pred             HhcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcC-----CCEEEEEcChhhcCC-----
Confidence            8889999999999976543  5677899999999999999999999999998865     489999999887665     


Q ss_pred             cccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccC-CCcEEEEEeeCCceeCCCCCccchhHHHHHHHHHHhhcC
Q 019722          188 RYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQM-EANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSKLLK  266 (336)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~-g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~  266 (336)
                                  .+.+..|++||+++.+|+++++.|+... +  |+|++|+||+++|++..........  .........
T Consensus       150 ------------~p~~~~Y~asKaal~~~~~sL~~El~~~~g--I~V~~v~Pg~v~T~~~~~~~~~~~~--~~~~~~~~~  213 (330)
T PRK06139        150 ------------QPYAAAYSASKFGLRGFSEALRGELADHPD--IHVCDVYPAFMDTPGFRHGANYTGR--RLTPPPPVY  213 (330)
T ss_pred             ------------CCCchhHHHHHHHHHHHHHHHHHHhCCCCC--eEEEEEecCCccCcccccccccccc--cccCCCCCC
Confidence                        5667789999999999999999999764 5  9999999999999987542211110  001122356


Q ss_pred             ChHHHHHHHHHHHhcCccccCCc
Q 019722          267 TIPQGAATTCYVAIHPRLVNVSG  289 (336)
Q Consensus       267 ~~~~~a~~~~~l~~~~~~~~~~G  289 (336)
                      +|+++|..+++++.++......|
T Consensus       214 ~pe~vA~~il~~~~~~~~~~~~g  236 (330)
T PRK06139        214 DPRRVAKAVVRLADRPRATTTVG  236 (330)
T ss_pred             CHHHHHHHHHHHHhCCCCEEEcC
Confidence            89999999999998665443333

>PRK07677 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.8e-35  Score=261.11  Aligned_cols=239  Identities=21%  Similarity=0.240  Sum_probs=195.2

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCCC
Q 019722           35 SVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLP  114 (336)
Q Consensus        35 gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  114 (336)
                      ||++|||||++|||+++++.|+++|++|++++|+.+.+++..+++...  +.++.++++|+++++++.++++++.+.+++
T Consensus         1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   78 (252)
T PRK07677          1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQF--PGQVLTVQMDVRNPEDVQKMVEQIDEKFGR   78 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            689999999999999999999999999999999988887777766544  457999999999999999999999988999


Q ss_pred             ccEEEEcccCCCC--CCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccccccc
Q 019722          115 LNLLINNAGKFAH--QHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQ  192 (336)
Q Consensus       115 id~lv~nAg~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~~  192 (336)
                      +|++|||||....  ..+.+.++|++++++|+.+++.++|+++|+|.+...    .|+||++||..+..+          
T Consensus        79 id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~----~g~ii~isS~~~~~~----------  144 (252)
T PRK07677         79 IDALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGI----KGNIINMVATYAWDA----------  144 (252)
T ss_pred             ccEEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCC----CEEEEEEcChhhccC----------
Confidence            9999999996432  256788999999999999999999999999876421    479999999877654          


Q ss_pred             ccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHcc-CCCcEEEEEeeCCceeCC-CCCccc---hhHHHHHHHHHHhhcCC
Q 019722          193 ISRNKSHYDATRAYALSKLANVLHTKELAQRLKQ-MEANVTVNCVHPGIVRTR-LTRERE---GFITDLVFFLTSKLLKT  267 (336)
Q Consensus       193 ~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~-~g~~I~vn~v~PG~v~T~-~~~~~~---~~~~~~~~~~~~~~~~~  267 (336)
                             .+....|++||+++++++++++.|+.+ .|  |+||+|+||+++|+ +.....   .......+..+.....+
T Consensus       145 -------~~~~~~Y~~sKaa~~~~~~~la~e~~~~~g--i~v~~v~PG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (252)
T PRK07677        145 -------GPGVIHSAAAKAGVLAMTRTLAVEWGRKYG--IRVNAIAPGPIERTGGADKLWESEEAAKRTIQSVPLGRLGT  215 (252)
T ss_pred             -------CCCCcchHHHHHHHHHHHHHHHHHhCcccC--eEEEEEeecccccccccccccCCHHHHHHHhccCCCCCCCC
Confidence                   445668999999999999999999975 46  99999999999954 322211   11111222223345678


Q ss_pred             hHHHHHHHHHHHhcCccccCCceeeccCcccc
Q 019722          268 IPQGAATTCYVAIHPRLVNVSGKYFADCNEAW  299 (336)
Q Consensus       268 ~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  299 (336)
                      |++++..+++++. +...+++|+.+..+++.+
T Consensus       216 ~~~va~~~~~l~~-~~~~~~~g~~~~~~gg~~  246 (252)
T PRK07677        216 PEEIAGLAYFLLS-DEAAYINGTCITMDGGQW  246 (252)
T ss_pred             HHHHHHHHHHHcC-ccccccCCCEEEECCCee
Confidence            9999999999887 667789999998888744

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=100.00  E-value=5.8e-35  Score=261.27  Aligned_cols=234  Identities=25%  Similarity=0.290  Sum_probs=192.6

Q ss_pred             EEEEeCCCChHHHHHHHHHHH----CCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcC
Q 019722           37 TAIITGATSGIGAETARVLAK----RGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLN  112 (336)
Q Consensus        37 ~~lItGgs~gIG~aia~~L~~----~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  112 (336)
                      ++|||||++|||++++++|++    +|++|++++|+.+.+++..++++...++.++.++++|++++++++.+++++.+.+
T Consensus         2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   81 (256)
T TIGR01500         2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLLKALRELP   81 (256)
T ss_pred             EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHHhcCCCceEEEEEeccCCHHHHHHHHHHHHhcc
Confidence            689999999999999999997    7999999999999988888888764445689999999999999999999998876


Q ss_pred             CCc----cEEEEcccCCCCC----CC-CCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCcccccc
Q 019722          113 LPL----NLLINNAGKFAHQ----HA-ISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFS  183 (336)
Q Consensus       113 ~~i----d~lv~nAg~~~~~----~~-~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~  183 (336)
                      +.+    |+||||||.....    .+ .+.++|++++++|+.+++.++++++|.|+++.   +..++||++||.++..+ 
T Consensus        82 g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~---~~~~~iv~isS~~~~~~-  157 (256)
T TIGR01500        82 RPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSP---GLNRTVVNISSLCAIQP-  157 (256)
T ss_pred             ccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcC---CCCCEEEEECCHHhCCC-
Confidence            643    6999999975431    22 24678999999999999999999999998642   11479999999877655 


Q ss_pred             CCcccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccch------hHHHHH
Q 019722          184 GDMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREG------FITDLV  257 (336)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~------~~~~~~  257 (336)
                                      .+++..|++||++++.|+++++.|+.+.|  |+||+|+||+|+|+|.+....      ......
T Consensus       158 ----------------~~~~~~Y~asKaal~~l~~~la~e~~~~~--i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~  219 (256)
T TIGR01500       158 ----------------FKGWALYCAGKAARDMLFQVLALEEKNPN--VRVLNYAPGVLDTDMQQQVREESVDPDMRKGLQ  219 (256)
T ss_pred             ----------------CCCchHHHHHHHHHHHHHHHHHHHhcCCC--eEEEEecCCcccchHHHHHHHhcCChhHHHHHH
Confidence                            66778899999999999999999999877  999999999999998764211      111122


Q ss_pred             HHHHHhhcCChHHHHHHHHHHHhcCccccCCceeecc
Q 019722          258 FFLTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFAD  294 (336)
Q Consensus       258 ~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~  294 (336)
                      ...+..+..+|+|+|..+++++.  ..++++|++++.
T Consensus       220 ~~~~~~~~~~p~eva~~~~~l~~--~~~~~~G~~~~~  254 (256)
T TIGR01500       220 ELKAKGKLVDPKVSAQKLLSLLE--KDKFKSGAHVDY  254 (256)
T ss_pred             HHHhcCCCCCHHHHHHHHHHHHh--cCCcCCcceeec
Confidence            33345567899999999999995  357899998865

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>PRK07856 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.8e-35  Score=261.75  Aligned_cols=237  Identities=25%  Similarity=0.217  Sum_probs=196.2

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      +++++||++|||||++|||++++++|+++|++|++++|+.+.      .  .  .+.++.++++|+++++++.++++.+.
T Consensus         1 ~~~~~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~------~--~--~~~~~~~~~~D~~~~~~~~~~~~~~~   70 (252)
T PRK07856          1 NLDLTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE------T--V--DGRPAEFHAADVRDPDQVAALVDAIV   70 (252)
T ss_pred             CCCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh------h--h--cCCceEEEEccCCCHHHHHHHHHHHH
Confidence            357899999999999999999999999999999999998764      0  1  14578899999999999999999999


Q ss_pred             hcCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcc
Q 019722          110 SLNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMI  187 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~  187 (336)
                      +.++++|++|||||.....  .+.+.+.|++++++|+.+++.+++++.|.|.++..    .++||++||..+..+     
T Consensus        71 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~----~g~ii~isS~~~~~~-----  141 (252)
T PRK07856         71 ERHGRLDVLVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPG----GGSIVNIGSVSGRRP-----  141 (252)
T ss_pred             HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC----CcEEEEEcccccCCC-----
Confidence            9899999999999976433  45677889999999999999999999999976421    479999999887665     


Q ss_pred             cccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccch---hHHHHHHHHHHhh
Q 019722          188 RYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREG---FITDLVFFLTSKL  264 (336)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~---~~~~~~~~~~~~~  264 (336)
                                  .+....|+++|++++.|++.++.++.+.   |+||+|+||+++|++......   .........+..+
T Consensus       142 ------------~~~~~~Y~~sK~a~~~l~~~la~e~~~~---i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~  206 (252)
T PRK07856        142 ------------SPGTAAYGAAKAGLLNLTRSLAVEWAPK---VRVNAVVVGLVRTEQSELHYGDAEGIAAVAATVPLGR  206 (252)
T ss_pred             ------------CCCCchhHHHHHHHHHHHHHHHHHhcCC---eEEEEEEeccccChHHhhhccCHHHHHHHhhcCCCCC
Confidence                        5667789999999999999999999753   999999999999998654211   1111112223345


Q ss_pred             cCChHHHHHHHHHHHhcCccccCCceeeccCcccccc
Q 019722          265 LKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWTS  301 (336)
Q Consensus       265 ~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~~  301 (336)
                      ...|+|++..++++++ +...+++|+.+..+|+...+
T Consensus       207 ~~~p~~va~~~~~L~~-~~~~~i~G~~i~vdgg~~~~  242 (252)
T PRK07856        207 LATPADIAWACLFLAS-DLASYVSGANLEVHGGGERP  242 (252)
T ss_pred             CcCHHHHHHHHHHHcC-cccCCccCCEEEECCCcchH
Confidence            6789999999999986 66789999999999875544

>PRK08226 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.4e-35  Score=262.31  Aligned_cols=244  Identities=27%  Similarity=0.325  Sum_probs=198.2

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHh
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHS  110 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  110 (336)
                      ..+++|+++||||++|||++++++|+++|++|++++|+.. ..+..+++...  +.++.++++|++++++++++++++.+
T Consensus         2 ~~~~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~-~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~   78 (263)
T PRK08226          2 GKLTGKTALITGALQGIGEGIARVFARHGANLILLDISPE-IEKLADELCGR--GHRCTAVVADVRDPASVAAAIKRAKE   78 (263)
T ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHH-HHHHHHHHHHh--CCceEEEECCCCCHHHHHHHHHHHHH
Confidence            4688999999999999999999999999999999999875 34444555432  45788999999999999999999999


Q ss_pred             cCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccc
Q 019722          111 LNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIR  188 (336)
Q Consensus       111 ~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~  188 (336)
                      .++++|++|||||.....  .+.+.+++++.+++|+.+++.+++.++|.+.+..     .++||++||..+...+     
T Consensus        79 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-----~~~iv~isS~~~~~~~-----  148 (263)
T PRK08226         79 KEGRIDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARK-----DGRIVMMSSVTGDMVA-----  148 (263)
T ss_pred             HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-----CcEEEEECcHHhcccC-----
Confidence            999999999999975432  5567788999999999999999999999987654     4799999997653211     


Q ss_pred             ccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccch---------hHHHHHHH
Q 019722          189 YLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREG---------FITDLVFF  259 (336)
Q Consensus       189 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~---------~~~~~~~~  259 (336)
                                 .+++..|+.+|++++.++++++.++.+.+  |+||+|+||+++|++.+....         ........
T Consensus       149 -----------~~~~~~Y~~sK~a~~~~~~~la~~~~~~~--i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~  215 (263)
T PRK08226        149 -----------DPGETAYALTKAAIVGLTKSLAVEYAQSG--IRVNAICPGYVRTPMAESIARQSNPEDPESVLTEMAKA  215 (263)
T ss_pred             -----------CCCcchHHHHHHHHHHHHHHHHHHhcccC--cEEEEEecCcccCHHHHhhhhhccCCCcHHHHHHHhcc
Confidence                       45567899999999999999999999877  999999999999998654321         11111111


Q ss_pred             HHHhhcCChHHHHHHHHHHHhcCccccCCceeeccCcccccc
Q 019722          260 LTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWTS  301 (336)
Q Consensus       260 ~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~~  301 (336)
                      .+..+..+|+|++..++|+++ +.+.+++|+.+..+|+...+
T Consensus       216 ~p~~~~~~~~~va~~~~~l~~-~~~~~~~g~~i~~dgg~~~~  256 (263)
T PRK08226        216 IPLRRLADPLEVGELAAFLAS-DESSYLTGTQNVIDGGSTLP  256 (263)
T ss_pred             CCCCCCCCHHHHHHHHHHHcC-chhcCCcCceEeECCCcccC
Confidence            223345689999999999987 66789999999999885443

>PRK06523 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.1e-35  Score=262.62  Aligned_cols=235  Identities=23%  Similarity=0.240  Sum_probs=193.1

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      ..+++||++|||||++|||++++++|+++|++|++++|++...           ...++.++++|+++++++..+++++.
T Consensus         4 ~~~~~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~-----------~~~~~~~~~~D~~~~~~~~~~~~~~~   72 (260)
T PRK06523          4 FLELAGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDD-----------LPEGVEFVAADLTTAEGCAAVARAVL   72 (260)
T ss_pred             CcCCCCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhh-----------cCCceeEEecCCCCHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999999986531           03468899999999999999999999


Q ss_pred             hcCCCccEEEEcccCCCC----CCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCC
Q 019722          110 SLNLPLNLLINNAGKFAH----QHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGD  185 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~~----~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~  185 (336)
                      +.++++|++|||||....    ..+.+.++|++++++|+.+++.++++++|.|++++     .++||++||..+..+.  
T Consensus        73 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-----~g~ii~isS~~~~~~~--  145 (260)
T PRK06523         73 ERLGGVDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARG-----SGVIIHVTSIQRRLPL--  145 (260)
T ss_pred             HHcCCCCEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-----CcEEEEEecccccCCC--
Confidence            989999999999996432    24567889999999999999999999999998764     4799999998765431  


Q ss_pred             cccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchh--------HHHHH
Q 019722          186 MIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGF--------ITDLV  257 (336)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~--------~~~~~  257 (336)
                                    .+....|+++|++++.++++++.++.+.|  |+||+|+||+++|++.......        ..+..
T Consensus       146 --------------~~~~~~Y~~sK~a~~~l~~~~a~~~~~~g--i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~  209 (260)
T PRK06523        146 --------------PESTTAYAAAKAALSTYSKSLSKEVAPKG--VRVNTVSPGWIETEAAVALAERLAEAAGTDYEGAK  209 (260)
T ss_pred             --------------CCCcchhHHHHHHHHHHHHHHHHHHhhcC--cEEEEEecCcccCccHHHHHHHHHhhcCCCHHHHH
Confidence                          12567899999999999999999999888  9999999999999986432110        01111


Q ss_pred             HH-------HHHhhcCChHHHHHHHHHHHhcCccccCCceeeccCcccc
Q 019722          258 FF-------LTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAW  299 (336)
Q Consensus       258 ~~-------~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  299 (336)
                      ..       .+..+...|+|++..++|+++ +...+++|+.+..+|+..
T Consensus       210 ~~~~~~~~~~p~~~~~~~~~va~~~~~l~s-~~~~~~~G~~~~vdgg~~  257 (260)
T PRK06523        210 QIIMDSLGGIPLGRPAEPEEVAELIAFLAS-DRAASITGTEYVIDGGTV  257 (260)
T ss_pred             HHHHHHhccCccCCCCCHHHHHHHHHHHhC-cccccccCceEEecCCcc
Confidence            11       223345689999999999997 667899999998888643

>PRK06841 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.6e-35  Score=259.73  Aligned_cols=239  Identities=28%  Similarity=0.310  Sum_probs=198.5

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      +++++||++|||||++|||.+++++|+++|++|++++|+.+.. +...++.    +.++.++++|+++++++..+++++.
T Consensus        10 ~~~~~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~-~~~~~~~----~~~~~~~~~Dl~~~~~~~~~~~~~~   84 (255)
T PRK06841         10 AFDLSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVA-EVAAQLL----GGNAKGLVCDVSDSQSVEAAVAAVI   84 (255)
T ss_pred             hcCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHhh----CCceEEEEecCCCHHHHHHHHHHHH
Confidence            3678999999999999999999999999999999999987642 2233322    4567899999999999999999999


Q ss_pred             hcCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcc
Q 019722          110 SLNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMI  187 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~  187 (336)
                      +.++++|++|||||.....  .+.+.+++++++++|+.+++.+++.+.|.|.++.     .++||++||..+..+     
T Consensus        85 ~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-----~~~iv~~sS~~~~~~-----  154 (255)
T PRK06841         85 SAFGRIDILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAG-----GGKIVNLASQAGVVA-----  154 (255)
T ss_pred             HHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcC-----CceEEEEcchhhccC-----
Confidence            8889999999999976432  4567789999999999999999999999998754     489999999877665     


Q ss_pred             cccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccch--hHHHHHHHHHHhhc
Q 019722          188 RYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREG--FITDLVFFLTSKLL  265 (336)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~--~~~~~~~~~~~~~~  265 (336)
                                  .+....|+++|++++.++++++.++.+.|  |+||+|+||+++|++.+....  .........+..+.
T Consensus       155 ------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~  220 (255)
T PRK06841        155 ------------LERHVAYCASKAGVVGMTKVLALEWGPYG--ITVNAISPTVVLTELGKKAWAGEKGERAKKLIPAGRF  220 (255)
T ss_pred             ------------CCCCchHHHHHHHHHHHHHHHHHHHHhhC--eEEEEEEeCcCcCcccccccchhHHHHHHhcCCCCCC
Confidence                        55677899999999999999999999887  999999999999998764321  11111222334456


Q ss_pred             CChHHHHHHHHHHHhcCccccCCceeeccCccc
Q 019722          266 KTIPQGAATTCYVAIHPRLVNVSGKYFADCNEA  298 (336)
Q Consensus       266 ~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  298 (336)
                      ..|++++..+++++. +...+++|+.+..+|+.
T Consensus       221 ~~~~~va~~~~~l~~-~~~~~~~G~~i~~dgg~  252 (255)
T PRK06841        221 AYPEEIAAAALFLAS-DAAAMITGENLVIDGGY  252 (255)
T ss_pred             cCHHHHHHHHHHHcC-ccccCccCCEEEECCCc
Confidence            789999999999987 66788999999988874

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-35  Score=266.54  Aligned_cols=233  Identities=24%  Similarity=0.285  Sum_probs=193.9

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      .++|++|++|||||++|||++++++|+++|++|++++|+.....           ..++.++++|+++++++.++++++.
T Consensus         4 ~~~l~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~-----------~~~~~~~~~D~~~~~~~~~~~~~~~   72 (266)
T PRK06171          4 WLNLQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQ-----------HENYQFVPTDVSSAEEVNHTVAEII   72 (266)
T ss_pred             cccCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCccccc-----------cCceEEEEccCCCHHHHHHHHHHHH
Confidence            56789999999999999999999999999999999999875432           2478889999999999999999999


Q ss_pred             hcCCCccEEEEcccCCCCC-----------CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCc
Q 019722          110 SLNLPLNLLINNAGKFAHQ-----------HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSI  178 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~~~-----------~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~  178 (336)
                      +.++++|++|||||.....           .+.+.++|++++++|+.+++.+++++.++|.+++     .++||++||..
T Consensus        73 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-----~g~iv~isS~~  147 (266)
T PRK06171         73 EKFGRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQH-----DGVIVNMSSEA  147 (266)
T ss_pred             HHcCCCCEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcC-----CcEEEEEcccc
Confidence            9999999999999975321           2467889999999999999999999999998754     48999999988


Q ss_pred             cccccCCcccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCcee-CCCCCccch------
Q 019722          179 HSWFSGDMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVR-TRLTREREG------  251 (336)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~-T~~~~~~~~------  251 (336)
                      +..+                 .++...|+++|++++.|+++++.++.+.|  |+||+|+||++. |++......      
T Consensus       148 ~~~~-----------------~~~~~~Y~~sK~a~~~l~~~la~e~~~~g--i~v~~v~pG~~~~t~~~~~~~~~~~~~~  208 (266)
T PRK06171        148 GLEG-----------------SEGQSCYAATKAALNSFTRSWAKELGKHN--IRVVGVAPGILEATGLRTPEYEEALAYT  208 (266)
T ss_pred             ccCC-----------------CCCCchhHHHHHHHHHHHHHHHHHhhhcC--eEEEEEeccccccCCCcChhhhhhhccc
Confidence            7665                 45667899999999999999999999888  999999999997 666432110      


Q ss_pred             ---hHHHHH----H--HHHHhhcCChHHHHHHHHHHHhcCccccCCceeeccCccc
Q 019722          252 ---FITDLV----F--FLTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEA  298 (336)
Q Consensus       252 ---~~~~~~----~--~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  298 (336)
                         ......    .  ..+..+...|+|++.+++|+++ +.+.+++|+.+.++|+.
T Consensus       209 ~~~~~~~~~~~~~~~~~~p~~r~~~~~eva~~~~fl~s-~~~~~itG~~i~vdgg~  263 (266)
T PRK06171        209 RGITVEQLRAGYTKTSTIPLGRSGKLSEVADLVCYLLS-DRASYITGVTTNIAGGK  263 (266)
T ss_pred             cCCCHHHHHhhhcccccccCCCCCCHHHhhhheeeeec-cccccceeeEEEecCcc
Confidence               001111    1  2344566789999999999987 67789999999998864

>PRK08278 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-34  Score=261.73  Aligned_cols=235  Identities=21%  Similarity=0.251  Sum_probs=192.7

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHH-------HHHHHHHHHhhCCCCceEEEeccCCCHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKA-------AEEAKARLASDCPGSDIVVLPLDLSSLSSVR  102 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~-------~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~  102 (336)
                      +++++||++|||||++|||.++++.|+++|++|++++|+.+.       +++..+++...  +.++.++++|+++++++.
T Consensus         1 ~~~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~~D~~~~~~i~   78 (273)
T PRK08278          1 MMSLSGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAA--GGQALPLVGDVRDEDQVA   78 (273)
T ss_pred             CCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhc--CCceEEEEecCCCHHHHH
Confidence            356899999999999999999999999999999999998643       34444555443  568999999999999999


Q ss_pred             HHHHHHHhcCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccc
Q 019722          103 NFVSQFHSLNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHS  180 (336)
Q Consensus       103 ~~~~~~~~~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~  180 (336)
                      ++++++.+.++++|++|||||.....  .+.+.+++++++++|+.+++.++++++|+|++++     .++||++||..+.
T Consensus        79 ~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~-----~g~iv~iss~~~~  153 (273)
T PRK08278         79 AAVAKAVERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSE-----NPHILTLSPPLNL  153 (273)
T ss_pred             HHHHHHHHHhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcC-----CCEEEEECCchhc
Confidence            99999988889999999999975433  5667889999999999999999999999998764     4799999997654


Q ss_pred             cccCCcccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCC-ceeCCCCCccchhHHHHHHH
Q 019722          181 WFSGDMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPG-IVRTRLTREREGFITDLVFF  259 (336)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG-~v~T~~~~~~~~~~~~~~~~  259 (336)
                      .+.               ..+++..|++||++++.++++++.|+.+.+  |+||+|+|| +++|++.+......      
T Consensus       154 ~~~---------------~~~~~~~Y~~sK~a~~~~~~~la~el~~~~--I~v~~i~Pg~~i~t~~~~~~~~~~------  210 (273)
T PRK08278        154 DPK---------------WFAPHTAYTMAKYGMSLCTLGLAEEFRDDG--IAVNALWPRTTIATAAVRNLLGGD------  210 (273)
T ss_pred             ccc---------------ccCCcchhHHHHHHHHHHHHHHHHHhhhcC--cEEEEEeCCCccccHHHHhccccc------
Confidence            431               025677899999999999999999999877  999999999 68898655432111      


Q ss_pred             HHHhhcCChHHHHHHHHHHHhcCccccCCceeeccC
Q 019722          260 LTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADC  295 (336)
Q Consensus       260 ~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~  295 (336)
                      .......+|++++..+++++. +...+++|+++...
T Consensus       211 ~~~~~~~~p~~va~~~~~l~~-~~~~~~~G~~~~~~  245 (273)
T PRK08278        211 EAMRRSRTPEIMADAAYEILS-RPAREFTGNFLIDE  245 (273)
T ss_pred             ccccccCCHHHHHHHHHHHhc-CccccceeEEEecc
Confidence            112345789999999999987 55678999988533

>PRK07109 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.2e-35  Score=269.51  Aligned_cols=228  Identities=24%  Similarity=0.258  Sum_probs=193.2

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      +.++++|+++||||++|||++++++|+++|++|++++|+.+++++..++++..  +.++.++++|++|+++++++++++.
T Consensus         3 ~~~l~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~--g~~~~~v~~Dv~d~~~v~~~~~~~~   80 (334)
T PRK07109          3 LKPIGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAA--GGEALAVVADVADAEAVQAAADRAE   80 (334)
T ss_pred             CCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHc--CCcEEEEEecCCCHHHHHHHHHHHH
Confidence            34688999999999999999999999999999999999999888888888654  5689999999999999999999999


Q ss_pred             hcCCCccEEEEcccCCCC--CCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcc
Q 019722          110 SLNLPLNLLINNAGKFAH--QHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMI  187 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~  187 (336)
                      +.++++|++|||||....  ..+.+.+++++.+++|+.+++.++++++|.|.+++     .|+||++||..+..+     
T Consensus        81 ~~~g~iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~-----~g~iV~isS~~~~~~-----  150 (334)
T PRK07109         81 EELGPIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRD-----RGAIIQVGSALAYRS-----  150 (334)
T ss_pred             HHCCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-----CcEEEEeCChhhccC-----
Confidence            999999999999997543  25678899999999999999999999999998764     489999999887765     


Q ss_pred             cccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHHHHHHHHhhcCC
Q 019722          188 RYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSKLLKT  267 (336)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~  267 (336)
                                  .+....|+++|+++++|+++++.|+...+.+|+|++|+||.++|++..........  ...+.....+
T Consensus       151 ------------~~~~~~Y~asK~a~~~~~~~l~~el~~~~~~I~v~~v~Pg~v~T~~~~~~~~~~~~--~~~~~~~~~~  216 (334)
T PRK07109        151 ------------IPLQSAYCAAKHAIRGFTDSLRCELLHDGSPVSVTMVQPPAVNTPQFDWARSRLPV--EPQPVPPIYQ  216 (334)
T ss_pred             ------------CCcchHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCccCchhhhhhhhccc--cccCCCCCCC
Confidence                        56677899999999999999999998765669999999999999976542111100  0111234568


Q ss_pred             hHHHHHHHHHHHhcCc
Q 019722          268 IPQGAATTCYVAIHPR  283 (336)
Q Consensus       268 ~~~~a~~~~~l~~~~~  283 (336)
                      |+++|..+++++.++.
T Consensus       217 pe~vA~~i~~~~~~~~  232 (334)
T PRK07109        217 PEVVADAILYAAEHPR  232 (334)
T ss_pred             HHHHHHHHHHHHhCCC
Confidence            9999999999998663

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=2.9e-34  Score=263.26  Aligned_cols=243  Identities=25%  Similarity=0.280  Sum_probs=196.2

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCC-hHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARS-LKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQF  108 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~-~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~  108 (336)
                      .++++||++|||||++|||++++++|+++|++|++.+++ ....++..++++..  +.++.++++|+++++++.++++++
T Consensus         7 ~~~l~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~--g~~~~~~~~Dv~d~~~~~~~~~~~   84 (306)
T PRK07792          7 TTDLSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAA--GAKAVAVAGDISQRATADELVATA   84 (306)
T ss_pred             CcCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhc--CCeEEEEeCCCCCHHHHHHHHHHH
Confidence            467999999999999999999999999999999999875 44566677777654  568999999999999999999999


Q ss_pred             HhcCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccC--CCCCeEEEEcCCccccccC
Q 019722          109 HSLNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKAT--GIQGRIVNVSSSIHSWFSG  184 (336)
Q Consensus       109 ~~~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~--~~~grIV~vsS~~~~~~~~  184 (336)
                      .+ ++++|+||||||+....  .+.+.++|++++++|+.+++.+++++.++|+++.+..  ...|+||++||..+..+  
T Consensus        85 ~~-~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~--  161 (306)
T PRK07792         85 VG-LGGLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLVG--  161 (306)
T ss_pred             HH-hCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCcccccC--
Confidence            88 99999999999986543  4567889999999999999999999999997643211  12479999999877655  


Q ss_pred             CcccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHHHHHHHHhh
Q 019722          185 DMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSKL  264 (336)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~  264 (336)
                                     .++...|+++|+++++|++.++.|+.+.|  |+||+|+||. .|+|............  .....
T Consensus       162 ---------------~~~~~~Y~asKaal~~l~~~la~e~~~~g--I~vn~i~Pg~-~t~~~~~~~~~~~~~~--~~~~~  221 (306)
T PRK07792        162 ---------------PVGQANYGAAKAGITALTLSAARALGRYG--VRANAICPRA-RTAMTADVFGDAPDVE--AGGID  221 (306)
T ss_pred             ---------------CCCCchHHHHHHHHHHHHHHHHHHhhhcC--eEEEEECCCC-CCchhhhhccccchhh--hhccC
Confidence                           45667899999999999999999999888  9999999994 8887654221111110  01112


Q ss_pred             cCChHHHHHHHHHHHhcCccccCCceeeccCccc
Q 019722          265 LKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEA  298 (336)
Q Consensus       265 ~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  298 (336)
                      ...|++++..++|+++ +...+++|+.+..+|+.
T Consensus       222 ~~~pe~va~~v~~L~s-~~~~~~tG~~~~v~gg~  254 (306)
T PRK07792        222 PLSPEHVVPLVQFLAS-PAAAEVNGQVFIVYGPM  254 (306)
T ss_pred             CCCHHHHHHHHHHHcC-ccccCCCCCEEEEcCCe
Confidence            2478999999999986 66678999999888763

>PRK05872 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.2e-34  Score=262.91  Aligned_cols=232  Identities=23%  Similarity=0.248  Sum_probs=193.3

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      +.+++||++|||||++|||+++++.|+++|++|++++|+.+++++..+++..   +.++..+++|++|++++.++++++.
T Consensus         4 ~~~l~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~---~~~~~~~~~Dv~d~~~v~~~~~~~~   80 (296)
T PRK05872          4 MTSLAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGG---DDRVLTVVADVTDLAAMQAAAEEAV   80 (296)
T ss_pred             CCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcC---CCcEEEEEecCCCHHHHHHHHHHHH
Confidence            4568999999999999999999999999999999999999888877776632   3567788899999999999999999


Q ss_pred             hcCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcc
Q 019722          110 SLNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMI  187 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~  187 (336)
                      +.++++|++|||||+....  .+.+.++|++++++|+.+++.++++++|.|.+.      .|+||++||.++..+     
T Consensus        81 ~~~g~id~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~------~g~iv~isS~~~~~~-----  149 (296)
T PRK05872         81 ERFGGIDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIER------RGYVLQVSSLAAFAA-----  149 (296)
T ss_pred             HHcCCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc------CCEEEEEeCHhhcCC-----
Confidence            9899999999999976532  567889999999999999999999999999774      379999999877665     


Q ss_pred             cccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchh---HHHHHHHH--HH
Q 019722          188 RYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGF---ITDLVFFL--TS  262 (336)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~---~~~~~~~~--~~  262 (336)
                                  .+.+..|++||++++.|+++++.|+.+.|  |+||+|+||+++|++.+.....   .......+  +.
T Consensus       150 ------------~~~~~~Y~asKaal~~~~~~l~~e~~~~g--i~v~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~~~~p~  215 (296)
T PRK05872        150 ------------APGMAAYCASKAGVEAFANALRLEVAHHG--VTVGSAYLSWIDTDLVRDADADLPAFRELRARLPWPL  215 (296)
T ss_pred             ------------CCCchHHHHHHHHHHHHHHHHHHHHHHHC--cEEEEEecCcccchhhhhccccchhHHHHHhhCCCcc
Confidence                        56778899999999999999999999888  9999999999999997754221   11111111  22


Q ss_pred             hhcCChHHHHHHHHHHHhcCccccCCce
Q 019722          263 KLLKTIPQGAATTCYVAIHPRLVNVSGK  290 (336)
Q Consensus       263 ~~~~~~~~~a~~~~~l~~~~~~~~~~G~  290 (336)
                      ....++++++..+++++. ....+++|.
T Consensus       216 ~~~~~~~~va~~i~~~~~-~~~~~i~~~  242 (296)
T PRK05872        216 RRTTSVEKCAAAFVDGIE-RRARRVYAP  242 (296)
T ss_pred             cCCCCHHHHHHHHHHHHh-cCCCEEEch
Confidence            345689999999999987 444555554

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=2.6e-34  Score=256.10  Aligned_cols=238  Identities=23%  Similarity=0.256  Sum_probs=191.1

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeC-ChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGARLVLPAR-SLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      |.+++|++|||||++|||+++++.|+++|++|+++.+ +.+..+....++     +.++.++++|+++++++..+++++.
T Consensus         1 ~~l~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~   75 (253)
T PRK08642          1 MQISEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADEL-----GDRAIALQADVTDREQVQAMFATAT   75 (253)
T ss_pred             CCCCCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHh-----CCceEEEEcCCCCHHHHHHHHHHHH
Confidence            4578899999999999999999999999999988765 444444443332     3578899999999999999999998


Q ss_pred             hcCCC-ccEEEEcccCCC--------CCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccc
Q 019722          110 SLNLP-LNLLINNAGKFA--------HQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHS  180 (336)
Q Consensus       110 ~~~~~-id~lv~nAg~~~--------~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~  180 (336)
                      +.+++ +|++|||||...        ...+.+.+++++.+++|+.+++.++++++|.|.+.+     .++||++||..+.
T Consensus        76 ~~~g~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-----~g~iv~iss~~~~  150 (253)
T PRK08642         76 EHFGKPITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQG-----FGRIINIGTNLFQ  150 (253)
T ss_pred             HHhCCCCeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcC-----CeEEEEECCcccc
Confidence            88887 999999998632        124567788999999999999999999999997654     4899999997554


Q ss_pred             cccCCcccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccc-hh-HHHHHH
Q 019722          181 WFSGDMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRERE-GF-ITDLVF  258 (336)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~-~~-~~~~~~  258 (336)
                      .+                 ..++..|+++|++++.+++++++++.+.|  |+||+|+||+++|+...... .. ......
T Consensus       151 ~~-----------------~~~~~~Y~~sK~a~~~l~~~la~~~~~~~--i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~  211 (253)
T PRK08642        151 NP-----------------VVPYHDYTTAKAALLGLTRNLAAELGPYG--ITVNMVSGGLLRTTDASAATPDEVFDLIAA  211 (253)
T ss_pred             CC-----------------CCCccchHHHHHHHHHHHHHHHHHhCccC--eEEEEEeecccCCchhhccCCHHHHHHHHh
Confidence            32                 34456899999999999999999999888  99999999999998654321 11 111112


Q ss_pred             HHHHhhcCChHHHHHHHHHHHhcCccccCCceeeccCccc
Q 019722          259 FLTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEA  298 (336)
Q Consensus       259 ~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  298 (336)
                      ..+.....+|++++..++|++. +...+++|+.+..+|+.
T Consensus       212 ~~~~~~~~~~~~va~~~~~l~~-~~~~~~~G~~~~vdgg~  250 (253)
T PRK08642        212 TTPLRKVTTPQEFADAVLFFAS-PWARAVTGQNLVVDGGL  250 (253)
T ss_pred             cCCcCCCCCHHHHHHHHHHHcC-chhcCccCCEEEeCCCe
Confidence            2233456789999999999997 66689999999888863

>PRK07576 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.1e-34  Score=257.74  Aligned_cols=243  Identities=18%  Similarity=0.190  Sum_probs=199.8

Q ss_pred             CCCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHH
Q 019722           29 GCPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQF  108 (336)
Q Consensus        29 ~~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~  108 (336)
                      +++++++|++|||||++|||.+++++|+++|++|++++|+.+.+++..+++...  +.++.++++|+++++++.++++++
T Consensus         3 ~~~~~~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~i~~~~~~~   80 (264)
T PRK07576          3 TMFDFAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQA--GPEGLGVSADVRDYAAVEAAFAQI   80 (264)
T ss_pred             ccccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHh--CCceEEEECCCCCHHHHHHHHHHH
Confidence            378899999999999999999999999999999999999988877776666654  456789999999999999999999


Q ss_pred             HhcCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCc
Q 019722          109 HSLNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDM  186 (336)
Q Consensus       109 ~~~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~  186 (336)
                      .+.++++|++|||||.....  .+.+.+++++.+++|+.+++.++++++|.|++.      +|+||++||..+..+    
T Consensus        81 ~~~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~------~g~iv~iss~~~~~~----  150 (264)
T PRK07576         81 ADEFGPIDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRP------GASIIQISAPQAFVP----  150 (264)
T ss_pred             HHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC------CCEEEEECChhhccC----
Confidence            88889999999999865332  456778899999999999999999999999754      379999999876654    


Q ss_pred             ccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCcee-CCCCCcc-ch-hH-HHHHHHHHH
Q 019722          187 IRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVR-TRLTRER-EG-FI-TDLVFFLTS  262 (336)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~-T~~~~~~-~~-~~-~~~~~~~~~  262 (336)
                                   .+.+..|+++|++++.|+++++.++.+.|  |+|++|+||++. |+..... .. .. .......+.
T Consensus       151 -------------~~~~~~Y~asK~a~~~l~~~la~e~~~~g--i~v~~v~pg~~~~t~~~~~~~~~~~~~~~~~~~~~~  215 (264)
T PRK07576        151 -------------MPMQAHVCAAKAGVDMLTRTLALEWGPEG--IRVNSIVPGPIAGTEGMARLAPSPELQAAVAQSVPL  215 (264)
T ss_pred             -------------CCCccHHHHHHHHHHHHHHHHHHHhhhcC--eEEEEEecccccCcHHHhhcccCHHHHHHHHhcCCC
Confidence                         56677899999999999999999999877  999999999997 5533221 11 11 111111223


Q ss_pred             hhcCChHHHHHHHHHHHhcCccccCCceeeccCcccc
Q 019722          263 KLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAW  299 (336)
Q Consensus       263 ~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  299 (336)
                      .....|++++..+++++. +...+++|+++..+|+..
T Consensus       216 ~~~~~~~dva~~~~~l~~-~~~~~~~G~~~~~~gg~~  251 (264)
T PRK07576        216 KRNGTKQDIANAALFLAS-DMASYITGVVLPVDGGWS  251 (264)
T ss_pred             CCCCCHHHHHHHHHHHcC-hhhcCccCCEEEECCCcc
Confidence            345678999999999997 566789999999998753

>PRK06949 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.7e-34  Score=255.28  Aligned_cols=246  Identities=27%  Similarity=0.381  Sum_probs=204.6

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      ..++++|+++||||++|||++++++|+++|++|++++|+.++++++..+++..  +.++.++.+|+++++++.++++++.
T Consensus         4 ~~~~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~   81 (258)
T PRK06949          4 SINLEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAE--GGAAHVVSLDVTDYQSIKAAVAHAE   81 (258)
T ss_pred             ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHHH
Confidence            45689999999999999999999999999999999999999888877777554  4578999999999999999999998


Q ss_pred             hcCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhcc---CCCCCeEEEEcCCccccccC
Q 019722          110 SLNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKA---TGIQGRIVNVSSSIHSWFSG  184 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~---~~~~grIV~vsS~~~~~~~~  184 (336)
                      +.++++|++|||||.....  .+.+.++|+.++++|+.+++.+++++.|.|.++...   ....+++|++||..+..+  
T Consensus        82 ~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~--  159 (258)
T PRK06949         82 TEAGTIDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLRV--  159 (258)
T ss_pred             HhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcccccCC--
Confidence            8899999999999975432  455678899999999999999999999999875421   111479999999876544  


Q ss_pred             CcccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccch--hHHHHHHHHHH
Q 019722          185 DMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREG--FITDLVFFLTS  262 (336)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~--~~~~~~~~~~~  262 (336)
                                     .+....|+++|++++.++++++.++.+.+  |+||+|+||+++|++.+....  .........+.
T Consensus       160 ---------------~~~~~~Y~~sK~a~~~~~~~la~~~~~~~--i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~  222 (258)
T PRK06949        160 ---------------LPQIGLYCMSKAAVVHMTRAMALEWGRHG--INVNAICPGYIDTEINHHHWETEQGQKLVSMLPR  222 (258)
T ss_pred             ---------------CCCccHHHHHHHHHHHHHHHHHHHHHhcC--eEEEEEeeCCCcCCcchhccChHHHHHHHhcCCC
Confidence                           45567899999999999999999999877  999999999999998765321  11122223344


Q ss_pred             hhcCChHHHHHHHHHHHhcCccccCCceeeccCcc
Q 019722          263 KLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNE  297 (336)
Q Consensus       263 ~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~  297 (336)
                      .....|+++++.++|+++ +.+.+++|+.+..+|+
T Consensus       223 ~~~~~p~~~~~~~~~l~~-~~~~~~~G~~i~~dgg  256 (258)
T PRK06949        223 KRVGKPEDLDGLLLLLAA-DESQFINGAIISADDG  256 (258)
T ss_pred             CCCcCHHHHHHHHHHHhC-hhhcCCCCcEEEeCCC
Confidence            567889999999999987 7778999999988875

>PRK07814 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.1e-34  Score=255.68  Aligned_cols=245  Identities=22%  Similarity=0.236  Sum_probs=202.8

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      ++++++|++|||||++|||.++++.|+++|++|++++|+.+++++..+.++..  +.++.++++|+++++++.++++++.
T Consensus         5 ~~~~~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~   82 (263)
T PRK07814          5 RFRLDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAA--GRRAHVVAADLAHPEATAGLAGQAV   82 (263)
T ss_pred             cccCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHH
Confidence            45789999999999999999999999999999999999998888777777554  4578999999999999999999999


Q ss_pred             hcCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcc
Q 019722          110 SLNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMI  187 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~  187 (336)
                      +.++++|++|||||.....  .+.+.+++++++++|+.+++.+++++.+.|.+...    .+++|++||..+..+     
T Consensus        83 ~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~----~g~iv~~sS~~~~~~-----  153 (263)
T PRK07814         83 EAFGRLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSG----GGSVINISSTMGRLA-----  153 (263)
T ss_pred             HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcC----CeEEEEEccccccCC-----
Confidence            9889999999999965432  45677899999999999999999999999987421    489999999887665     


Q ss_pred             cccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccc---hhHHHHHHHHHHhh
Q 019722          188 RYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRERE---GFITDLVFFLTSKL  264 (336)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~---~~~~~~~~~~~~~~  264 (336)
                                  .++...|+++|++++.++++++.++.+ +  |++|+|+||++.|++.....   ..........+...
T Consensus       154 ------------~~~~~~Y~~sK~a~~~~~~~~~~e~~~-~--i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~  218 (263)
T PRK07814        154 ------------GRGFAAYGTAKAALAHYTRLAALDLCP-R--IRVNAIAPGSILTSALEVVAANDELRAPMEKATPLRR  218 (263)
T ss_pred             ------------CCCCchhHHHHHHHHHHHHHHHHHHCC-C--ceEEEEEeCCCcCchhhhccCCHHHHHHHHhcCCCCC
Confidence                        556778999999999999999999875 4  99999999999999765421   11111111222234


Q ss_pred             cCChHHHHHHHHHHHhcCccccCCceeeccCcccccc
Q 019722          265 LKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWTS  301 (336)
Q Consensus       265 ~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~~  301 (336)
                      ...+++++..++|++. +...+++|+.+..+++...+
T Consensus       219 ~~~~~~va~~~~~l~~-~~~~~~~g~~~~~~~~~~~~  254 (263)
T PRK07814        219 LGDPEDIAAAAVYLAS-PAGSYLTGKTLEVDGGLTFP  254 (263)
T ss_pred             CcCHHHHHHHHHHHcC-ccccCcCCCEEEECCCccCC
Confidence            4678999999999886 66778999999888875543

>PRK05717 oxidoreductase; Validated

Probab=100.00  E-value=3.7e-34  Score=255.81  Aligned_cols=237  Identities=24%  Similarity=0.248  Sum_probs=194.2

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      .++++||+++||||+++||++++++|+++|++|++++|+..+..+..+++     +.++.++++|+++.+++..+++++.
T Consensus         5 ~~~~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~-----~~~~~~~~~Dl~~~~~~~~~~~~~~   79 (255)
T PRK05717          5 NPGHNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKAL-----GENAWFIAMDVADEAQVAAGVAEVL   79 (255)
T ss_pred             CcccCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHc-----CCceEEEEccCCCHHHHHHHHHHHH
Confidence            56799999999999999999999999999999999999987666554433     4578899999999999999999999


Q ss_pred             hcCCCccEEEEcccCCCCC----CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCC
Q 019722          110 SLNLPLNLLINNAGKFAHQ----HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGD  185 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~~~----~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~  185 (336)
                      +.++++|++|||||.....    .+.+.++|++.+++|+.+++.+++++.|.|.+.      .++||++||..+..+   
T Consensus        80 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~------~g~ii~~sS~~~~~~---  150 (255)
T PRK05717         80 GQFGRLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAH------NGAIVNLASTRARQS---  150 (255)
T ss_pred             HHhCCCCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc------CcEEEEEcchhhcCC---
Confidence            9899999999999976431    456778999999999999999999999999764      379999999887665   


Q ss_pred             cccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccc-hhHHHH-HHHHHHh
Q 019722          186 MIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRERE-GFITDL-VFFLTSK  263 (336)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~-~~~~~~-~~~~~~~  263 (336)
                                    .+....|+++|++++.++++++.++.. +  |+||+|+||+++|++..... ...... ....+..
T Consensus       151 --------------~~~~~~Y~~sKaa~~~~~~~la~~~~~-~--i~v~~i~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~  213 (255)
T PRK05717        151 --------------EPDTEAYAASKGGLLALTHALAISLGP-E--IRVNAVSPGWIDARDPSQRRAEPLSEADHAQHPAG  213 (255)
T ss_pred             --------------CCCCcchHHHHHHHHHHHHHHHHHhcC-C--CEEEEEecccCcCCccccccchHHHHHHhhcCCCC
Confidence                          445668999999999999999999875 3  99999999999999754321 111110 1112234


Q ss_pred             hcCChHHHHHHHHHHHhcCccccCCceeeccCccc
Q 019722          264 LLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEA  298 (336)
Q Consensus       264 ~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  298 (336)
                      +...|++++..+++++. +...+++|+.+..+|+.
T Consensus       214 ~~~~~~~va~~~~~l~~-~~~~~~~g~~~~~~gg~  247 (255)
T PRK05717        214 RVGTVEDVAAMVAWLLS-RQAGFVTGQEFVVDGGM  247 (255)
T ss_pred             CCcCHHHHHHHHHHHcC-chhcCccCcEEEECCCc
Confidence            55688999999998886 55678999998888763

>PRK06701 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.2e-34  Score=259.18  Aligned_cols=247  Identities=25%  Similarity=0.262  Sum_probs=199.9

Q ss_pred             cccccCCCCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChH-HHHHHHHHHHhhCCCCceEEEeccCCCHHHH
Q 019722           23 AEQVTDGCPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLK-AAEEAKARLASDCPGSDIVVLPLDLSSLSSV  101 (336)
Q Consensus        23 ~~~~~~~~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~-~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v  101 (336)
                      .++.+.++++++||++|||||++|||++++++|+++|++|++++|+.. ..+...+.++..  +.++.++.+|+++.+++
T Consensus        34 ~~~~~~~~~~~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~  111 (290)
T PRK06701         34 EAPNYKGSGKLKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKE--GVKCLLIPGDVSDEAFC  111 (290)
T ss_pred             CccccccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhc--CCeEEEEEccCCCHHHH
Confidence            344444467899999999999999999999999999999999999864 344444444432  46789999999999999


Q ss_pred             HHHHHHHHhcCCCccEEEEcccCCCC---CCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCc
Q 019722          102 RNFVSQFHSLNLPLNLLINNAGKFAH---QHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSI  178 (336)
Q Consensus       102 ~~~~~~~~~~~~~id~lv~nAg~~~~---~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~  178 (336)
                      ..+++++.+.++++|++|||||....   ..+.+.++|++++++|+.+++.+++++++.|++       .++||++||..
T Consensus       112 ~~~~~~i~~~~~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~-------~g~iV~isS~~  184 (290)
T PRK06701        112 KDAVEETVRELGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQ-------GSAIINTGSIT  184 (290)
T ss_pred             HHHHHHHHHHcCCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhh-------CCeEEEEeccc
Confidence            99999999888999999999997533   256778899999999999999999999999854       37999999987


Q ss_pred             cccccCCcccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccc--hhHHHH
Q 019722          179 HSWFSGDMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRERE--GFITDL  256 (336)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~--~~~~~~  256 (336)
                      +..+                 .+....|+++|++++.++++++.++.+.|  |+||+|+||+++|++.....  ......
T Consensus       185 ~~~~-----------------~~~~~~Y~~sK~a~~~l~~~la~~~~~~g--Irv~~i~pG~v~T~~~~~~~~~~~~~~~  245 (290)
T PRK06701        185 GYEG-----------------NETLIDYSATKGAIHAFTRSLAQSLVQKG--IRVNAVAPGPIWTPLIPSDFDEEKVSQF  245 (290)
T ss_pred             ccCC-----------------CCCcchhHHHHHHHHHHHHHHHHHhhhcC--eEEEEEecCCCCCcccccccCHHHHHHH
Confidence            7654                 44566899999999999999999999877  99999999999999865431  111111


Q ss_pred             HHHHHHhhcCChHHHHHHHHHHHhcCccccCCceeeccCccc
Q 019722          257 VFFLTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEA  298 (336)
Q Consensus       257 ~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  298 (336)
                      ....+......+++++.++++++. +...+++|+.+..+|+.
T Consensus       246 ~~~~~~~~~~~~~dva~~~~~ll~-~~~~~~~G~~i~idgg~  286 (290)
T PRK06701        246 GSNTPMQRPGQPEELAPAYVFLAS-PDSSYITGQMLHVNGGV  286 (290)
T ss_pred             HhcCCcCCCcCHHHHHHHHHHHcC-cccCCccCcEEEeCCCc
Confidence            111223445678999999999987 55678999999888864

>PRK07890 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3e-34  Score=256.58  Aligned_cols=239  Identities=21%  Similarity=0.227  Sum_probs=198.2

Q ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhc
Q 019722           32 NLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSL  111 (336)
Q Consensus        32 ~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  111 (336)
                      .+++|+++||||++|||++++++|+++|++|++++|+++..++..+++...  +.++.++.+|+++++++..+++++.+.
T Consensus         2 ~l~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   79 (258)
T PRK07890          2 LLKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDL--GRRALAVPTDITDEDQCANLVALALER   79 (258)
T ss_pred             ccCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHh--CCceEEEecCCCCHHHHHHHHHHHHHH
Confidence            467899999999999999999999999999999999998888777777654  467899999999999999999999988


Q ss_pred             CCCccEEEEcccCCCC---CCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccc
Q 019722          112 NLPLNLLINNAGKFAH---QHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIR  188 (336)
Q Consensus       112 ~~~id~lv~nAg~~~~---~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~  188 (336)
                      ++++|++|||||....   ..+.+.+++++++++|+.+++.+++++.+.|.+.      +++||++||..+..+      
T Consensus        80 ~g~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~------~~~ii~~sS~~~~~~------  147 (258)
T PRK07890         80 FGRVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAES------GGSIVMINSMVLRHS------  147 (258)
T ss_pred             cCCccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhC------CCEEEEEechhhccC------
Confidence            9999999999997543   2456789999999999999999999999999765      379999999876654      


Q ss_pred             ccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccc------------hhHHHH
Q 019722          189 YLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRERE------------GFITDL  256 (336)
Q Consensus       189 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~------------~~~~~~  256 (336)
                                 .+++..|+++|++++.++++++.++.+.+  |++|+|+||++.|++.....            ......
T Consensus       148 -----------~~~~~~Y~~sK~a~~~l~~~~a~~~~~~~--i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~  214 (258)
T PRK07890        148 -----------QPKYGAYKMAKGALLAASQSLATELGPQG--IRVNSVAPGYIWGDPLKGYFRHQAGKYGVTVEQIYAET  214 (258)
T ss_pred             -----------CCCcchhHHHHHHHHHHHHHHHHHHhhcC--cEEEEEeCCccCcHHHHHHhhhcccccCCCHHHHHHHH
Confidence                       56677899999999999999999999877  99999999999998754311            011111


Q ss_pred             HHHHHHhhcCChHHHHHHHHHHHhcCccccCCceeeccCccc
Q 019722          257 VFFLTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEA  298 (336)
Q Consensus       257 ~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  298 (336)
                      ....+......++|++.++++++. +...+++|+.+..+++.
T Consensus       215 ~~~~~~~~~~~~~dva~a~~~l~~-~~~~~~~G~~i~~~gg~  255 (258)
T PRK07890        215 AANSDLKRLPTDDEVASAVLFLAS-DLARAITGQTLDVNCGE  255 (258)
T ss_pred             hhcCCccccCCHHHHHHHHHHHcC-HhhhCccCcEEEeCCcc
Confidence            111223345678999999999887 55578999998777653

>PRK12939 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.2e-34  Score=252.35  Aligned_cols=243  Identities=26%  Similarity=0.293  Sum_probs=205.0

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      ++++++|+++||||+++||++++++|+++|++|++++|++++.++..++++..  +.++.++++|+++++++.++++++.
T Consensus         2 ~~~~~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~   79 (250)
T PRK12939          2 ASNLAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAA--GGRAHAIAADLADPASVQRFFDAAA   79 (250)
T ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHH
Confidence            45688999999999999999999999999999999999998888887777654  4579999999999999999999999


Q ss_pred             hcCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcc
Q 019722          110 SLNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMI  187 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~  187 (336)
                      +.++++|++|||+|.....  .+.+.+++++.+++|+.+++.+++.+.|.+.+++     .|++|++||..+..+     
T Consensus        80 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-----~g~iv~isS~~~~~~-----  149 (250)
T PRK12939         80 AALGGLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSG-----RGRIVNLASDTALWG-----  149 (250)
T ss_pred             HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-----CeEEEEECchhhccC-----
Confidence            8889999999999976543  5567788999999999999999999999998754     479999999877655     


Q ss_pred             cccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccch--hHHHHHHHHHHhhc
Q 019722          188 RYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREG--FITDLVFFLTSKLL  265 (336)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~--~~~~~~~~~~~~~~  265 (336)
                                  .+....|+++|++++.+++.++.++...+  |+|++|+||++.|++.+....  .........+....
T Consensus       150 ------------~~~~~~y~~sK~~~~~~~~~l~~~~~~~~--i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~  215 (250)
T PRK12939        150 ------------APKLGAYVASKGAVIGMTRSLARELGGRG--ITVNAIAPGLTATEATAYVPADERHAYYLKGRALERL  215 (250)
T ss_pred             ------------CCCcchHHHHHHHHHHHHHHHHHHHhhhC--EEEEEEEECCCCCccccccCChHHHHHHHhcCCCCCC
Confidence                        45566899999999999999999998877  999999999999999876432  22222222233455


Q ss_pred             CChHHHHHHHHHHHhcCccccCCceeeccCcccc
Q 019722          266 KTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAW  299 (336)
Q Consensus       266 ~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  299 (336)
                      ..++|+++++++++. +...+++|+.+..+|+..
T Consensus       216 ~~~~dva~~~~~l~~-~~~~~~~G~~i~~~gg~~  248 (250)
T PRK12939        216 QVPDDVAGAVLFLLS-DAARFVTGQLLPVNGGFV  248 (250)
T ss_pred             CCHHHHHHHHHHHhC-ccccCccCcEEEECCCcc
Confidence            788999999999987 556789999999998743

>PRK06483 dihydromonapterin reductase; Provisional

Probab=100.00  E-value=3.6e-34  Score=252.94  Aligned_cols=230  Identities=19%  Similarity=0.186  Sum_probs=186.3

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCCC
Q 019722           35 SVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLP  114 (336)
Q Consensus        35 gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  114 (336)
                      +|++|||||++|||++++++|+++|++|++++|+++...   +.++.    ..+.++.+|+++++++.++++++.+.+++
T Consensus         2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~---~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   74 (236)
T PRK06483          2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAI---DGLRQ----AGAQCIQADFSTNAGIMAFIDELKQHTDG   74 (236)
T ss_pred             CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHH---HHHHH----cCCEEEEcCCCCHHHHHHHHHHHHhhCCC
Confidence            589999999999999999999999999999999876543   23322    13678999999999999999999998999


Q ss_pred             ccEEEEcccCCCC--CCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccccccc
Q 019722          115 LNLLINNAGKFAH--QHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQ  192 (336)
Q Consensus       115 id~lv~nAg~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~~  192 (336)
                      +|++|||||....  ..+.+.++|++++++|+.+++.+++.++|.|.+++.   ..++||++||..+..+          
T Consensus        75 id~lv~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~---~~g~iv~~ss~~~~~~----------  141 (236)
T PRK06483         75 LRAIIHNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGH---AASDIIHITDYVVEKG----------  141 (236)
T ss_pred             ccEEEECCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCC---CCceEEEEcchhhccC----------
Confidence            9999999997533  245568899999999999999999999999976431   1379999999876654          


Q ss_pred             ccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHHHHHHHHhhcCChHHHH
Q 019722          193 ISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSKLLKTIPQGA  272 (336)
Q Consensus       193 ~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~a  272 (336)
                             .+.+..|++||+++++|+++++.|+++ +  ||||+|+||++.|+.... ...........+..+...|+|++
T Consensus       142 -------~~~~~~Y~asKaal~~l~~~~a~e~~~-~--irvn~v~Pg~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~va  210 (236)
T PRK06483        142 -------SDKHIAYAASKAALDNMTLSFAAKLAP-E--VKVNSIAPALILFNEGDD-AAYRQKALAKSLLKIEPGEEEII  210 (236)
T ss_pred             -------CCCCccHHHHHHHHHHHHHHHHHHHCC-C--cEEEEEccCceecCCCCC-HHHHHHHhccCccccCCCHHHHH
Confidence                   556778999999999999999999986 4  999999999998865321 11111222223344567899999


Q ss_pred             HHHHHHHhcCccccCCceeeccCccc
Q 019722          273 ATTCYVAIHPRLVNVSGKYFADCNEA  298 (336)
Q Consensus       273 ~~~~~l~~~~~~~~~~G~~~~~~~~~  298 (336)
                      ..+.|+++   ..+++|+.+..+|+.
T Consensus       211 ~~~~~l~~---~~~~~G~~i~vdgg~  233 (236)
T PRK06483        211 DLVDYLLT---SCYVTGRSLPVDGGR  233 (236)
T ss_pred             HHHHHHhc---CCCcCCcEEEeCccc
Confidence            99999996   478999999888874

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=100.00  E-value=6.4e-34  Score=252.76  Aligned_cols=239  Identities=21%  Similarity=0.231  Sum_probs=196.8

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEe-eCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhc
Q 019722           33 LSSVTAIITGATSGIGAETARVLAKRGARLVLP-ARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSL  111 (336)
Q Consensus        33 l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~-~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  111 (336)
                      |++|++|||||++|||++++++|+++|++|++. .++.....+..+++...  +.++.++.+|+++.+++.++++++.+.
T Consensus         1 ~~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   78 (246)
T PRK12938          1 MSQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKAL--GFDFIASEGNVGDWDSTKAAFDKVKAE   78 (246)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            578999999999999999999999999998875 45555555666665543  567889999999999999999999988


Q ss_pred             CCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcccc
Q 019722          112 NLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRY  189 (336)
Q Consensus       112 ~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~  189 (336)
                      ++++|++|||||.....  .+.+.++|++++++|+.+++.++++++|.|.+++     .++||++||..+..+       
T Consensus        79 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-----~~~iv~isS~~~~~~-------  146 (246)
T PRK12938         79 VGEIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERG-----WGRIINISSVNGQKG-------  146 (246)
T ss_pred             hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-----CeEEEEEechhccCC-------
Confidence            89999999999976432  5667889999999999999999999999997754     479999999877655       


Q ss_pred             cccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccch-hHHHHHHHHHHhhcCCh
Q 019722          190 LGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREG-FITDLVFFLTSKLLKTI  268 (336)
Q Consensus       190 ~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~-~~~~~~~~~~~~~~~~~  268 (336)
                                .++...|+.+|++++.++++++.++.+.|  |++|+|+||++.|++.+.... .........+.....++
T Consensus       147 ----------~~~~~~y~~sK~a~~~~~~~l~~~~~~~g--i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~  214 (246)
T PRK12938        147 ----------QFGQTNYSTAKAGIHGFTMSLAQEVATKG--VTVNTVSPGYIGTDMVKAIRPDVLEKIVATIPVRRLGSP  214 (246)
T ss_pred             ----------CCCChhHHHHHHHHHHHHHHHHHHhhhhC--eEEEEEEecccCCchhhhcChHHHHHHHhcCCccCCcCH
Confidence                      55677899999999999999999999877  999999999999998765321 12222222233456788


Q ss_pred             HHHHHHHHHHHhcCccccCCceeeccCccc
Q 019722          269 PQGAATTCYVAIHPRLVNVSGKYFADCNEA  298 (336)
Q Consensus       269 ~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  298 (336)
                      ++++..+.|+++ +...+++|+.+..+++.
T Consensus       215 ~~v~~~~~~l~~-~~~~~~~g~~~~~~~g~  243 (246)
T PRK12938        215 DEIGSIVAWLAS-EESGFSTGADFSLNGGL  243 (246)
T ss_pred             HHHHHHHHHHcC-cccCCccCcEEEECCcc
Confidence            999999999886 55678999999888763

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=7.7e-34  Score=253.92  Aligned_cols=239  Identities=25%  Similarity=0.256  Sum_probs=193.3

Q ss_pred             CCCCCCEEEEeCCCC--hHHHHHHHHHHHCCCEEEEeeCC-----------hHHHHHHHHHHHhhCCCCceEEEeccCCC
Q 019722           31 PNLSSVTAIITGATS--GIGAETARVLAKRGARLVLPARS-----------LKAAEEAKARLASDCPGSDIVVLPLDLSS   97 (336)
Q Consensus        31 ~~l~gk~~lItGgs~--gIG~aia~~L~~~G~~V~~~~r~-----------~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~   97 (336)
                      +++++|++|||||++  |||.+++++|+++|++|++++|+           ........+.+...  +.+++++++|+++
T Consensus         1 ~~l~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~   78 (256)
T PRK12748          1 LPLMKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESY--GVRCEHMEIDLSQ   78 (256)
T ss_pred             CCCCCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhc--CCeEEEEECCCCC
Confidence            467899999999994  99999999999999999999987           22222233444332  4579999999999


Q ss_pred             HHHHHHHHHHHHhcCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEc
Q 019722           98 LSSVRNFVSQFHSLNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVS  175 (336)
Q Consensus        98 ~~~v~~~~~~~~~~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vs  175 (336)
                      ++++..+++++.+.++++|++|||||.....  .+.+.+++++.+++|+.+++.+++++.+.|.+..     .++||++|
T Consensus        79 ~~~~~~~~~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-----~~~iv~~s  153 (256)
T PRK12748         79 PYAPNRVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKA-----GGRIINLT  153 (256)
T ss_pred             HHHHHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcC-----CeEEEEEC
Confidence            9999999999999999999999999975432  5567788999999999999999999999997643     47999999


Q ss_pred             CCccccccCCcccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHH
Q 019722          176 SSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITD  255 (336)
Q Consensus       176 S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~  255 (336)
                      |..+..+                 .++...|+++|++++.++++++.++.+.+  |+|++|+||+++|++....  ....
T Consensus       154 s~~~~~~-----------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~~--i~v~~i~Pg~~~t~~~~~~--~~~~  212 (256)
T PRK12748        154 SGQSLGP-----------------MPDELAYAATKGAIEAFTKSLAPELAEKG--ITVNAVNPGPTDTGWITEE--LKHH  212 (256)
T ss_pred             CccccCC-----------------CCCchHHHHHHHHHHHHHHHHHHHHHHhC--eEEEEEEeCcccCCCCChh--HHHh
Confidence            9866544                 45567899999999999999999998877  9999999999999976531  1111


Q ss_pred             HHHHHHHhhcCChHHHHHHHHHHHhcCccccCCceeeccCccc
Q 019722          256 LVFFLTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEA  298 (336)
Q Consensus       256 ~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  298 (336)
                      .....+..+...|++++..++++++ +...+++|+++..+++.
T Consensus       213 ~~~~~~~~~~~~~~~~a~~~~~l~~-~~~~~~~g~~~~~d~g~  254 (256)
T PRK12748        213 LVPKFPQGRVGEPVDAARLIAFLVS-EEAKWITGQVIHSEGGF  254 (256)
T ss_pred             hhccCCCCCCcCHHHHHHHHHHHhC-cccccccCCEEEecCCc
Confidence            1222233445688999999998887 66778999999888763

>PRK08628 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.1e-34  Score=254.74  Aligned_cols=242  Identities=24%  Similarity=0.224  Sum_probs=197.6

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHh
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHS  110 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  110 (336)
                      ++|+||++|||||++|||++++++|+++|++|++++|+++.. +..+++...  +.++.++++|+++++++.++++++.+
T Consensus         3 ~~l~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~-~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   79 (258)
T PRK08628          3 LNLKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDD-EFAEELRAL--QPRAEFVQVDLTDDAQCRDAVEQTVA   79 (258)
T ss_pred             CCcCCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhH-HHHHHHHhc--CCceEEEEccCCCHHHHHHHHHHHHH
Confidence            579999999999999999999999999999999999998776 566666554  56789999999999999999999999


Q ss_pred             cCCCccEEEEcccCCCCC-CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcccc
Q 019722          111 LNLPLNLLINNAGKFAHQ-HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRY  189 (336)
Q Consensus       111 ~~~~id~lv~nAg~~~~~-~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~  189 (336)
                      .++++|++|||||..... .+.+.++|++.+++|+.+++.+++.++|.+++.      .++||++||..+..+       
T Consensus        80 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~------~~~iv~~ss~~~~~~-------  146 (258)
T PRK08628         80 KFGRIDGLVNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLPHLKAS------RGAIVNISSKTALTG-------  146 (258)
T ss_pred             hcCCCCEEEECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhhcc------CcEEEEECCHHhccC-------
Confidence            899999999999965432 233348899999999999999999999998754      379999999877665       


Q ss_pred             cccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchh---HHHHHH----HHHH
Q 019722          190 LGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGF---ITDLVF----FLTS  262 (336)
Q Consensus       190 ~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~---~~~~~~----~~~~  262 (336)
                                .+....|++||++++.+++.++.|+.+.+  |+||+|+||.++|++.......   ......    ..+.
T Consensus       147 ----------~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~--i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~  214 (258)
T PRK08628        147 ----------QGGTSGYAAAKGAQLALTREWAVALAKDG--VRVNAVIPAEVMTPLYENWIATFDDPEAKLAAITAKIPL  214 (258)
T ss_pred             ----------CCCCchhHHHHHHHHHHHHHHHHHHhhcC--eEEEEEecCccCCHHHHHHhhhccCHHHHHHHHHhcCCc
Confidence                      45677899999999999999999998877  9999999999999975432110   011111    1111


Q ss_pred             -hhcCChHHHHHHHHHHHhcCccccCCceeeccCcccccc
Q 019722          263 -KLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWTS  301 (336)
Q Consensus       263 -~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~~  301 (336)
                       ....+|++++..+++++. +...+++|+.+..+|+....
T Consensus       215 ~~~~~~~~dva~~~~~l~~-~~~~~~~g~~~~~~gg~~~~  253 (258)
T PRK08628        215 GHRMTTAEEIADTAVFLLS-ERSSHTTGQWLFVDGGYVHL  253 (258)
T ss_pred             cccCCCHHHHHHHHHHHhC-hhhccccCceEEecCCcccc
Confidence             245789999999999987 55678899999888775443

>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=4.4e-36  Score=240.48  Aligned_cols=236  Identities=25%  Similarity=0.295  Sum_probs=204.5

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHh
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHS  110 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  110 (336)
                      .++.|+++++||+..|||++++++|++.|++|+.+.|+++.+..+.++.     ..-+..++.|+++++.+.+++-    
T Consensus         3 t~laG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~e~-----p~~I~Pi~~Dls~wea~~~~l~----   73 (245)
T KOG1207|consen    3 TSLAGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLVKET-----PSLIIPIVGDLSAWEALFKLLV----   73 (245)
T ss_pred             ccccceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHHhhC-----CcceeeeEecccHHHHHHHhhc----
Confidence            4689999999999999999999999999999999999999888776653     3458999999998776655543    


Q ss_pred             cCCCccEEEEcccCCCC--CCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccc
Q 019722          111 LNLPLNLLINNAGKFAH--QHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIR  188 (336)
Q Consensus       111 ~~~~id~lv~nAg~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~  188 (336)
                      ..+++|.+|||||+...  ..+++.+.++.+|++|+++.+.+.|...+.+..+..    +|.|||+||.++..+      
T Consensus        74 ~v~pidgLVNNAgvA~~~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~~----~GaIVNvSSqas~R~------  143 (245)
T KOG1207|consen   74 PVFPIDGLVNNAGVATNHPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQI----KGAIVNVSSQASIRP------  143 (245)
T ss_pred             ccCchhhhhccchhhhcchHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhccC----CceEEEecchhcccc------
Confidence            34689999999996543  478999999999999999999999998877766544    689999999998887      


Q ss_pred             ccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccch---hHHHHHHHHHHhhc
Q 019722          189 YLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREG---FITDLVFFLTSKLL  265 (336)
Q Consensus       189 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~---~~~~~~~~~~~~~~  265 (336)
                                 ..+...|+++|+|+.+++++|+.|+++++  ||||+|.|-.|-|+|.+..+.   -...+...++..++
T Consensus       144 -----------~~nHtvYcatKaALDmlTk~lAlELGp~k--IRVNsVNPTVVmT~MG~dnWSDP~K~k~mL~riPl~rF  210 (245)
T KOG1207|consen  144 -----------LDNHTVYCATKAALDMLTKCLALELGPQK--IRVNSVNPTVVMTDMGRDNWSDPDKKKKMLDRIPLKRF  210 (245)
T ss_pred             -----------cCCceEEeecHHHHHHHHHHHHHhhCcce--eEeeccCCeEEEecccccccCCchhccchhhhCchhhh
Confidence                       77788999999999999999999999988  999999999999999998743   34456677888888


Q ss_pred             CChHHHHHHHHHHHhcCccccCCceeeccCcccc
Q 019722          266 KTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAW  299 (336)
Q Consensus       266 ~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  299 (336)
                      ...++++.+++|+++ +.+++.+|.++-++|+.+
T Consensus       211 aEV~eVVnA~lfLLS-d~ssmttGstlpveGGfs  243 (245)
T KOG1207|consen  211 AEVDEVVNAVLFLLS-DNSSMTTGSTLPVEGGFS  243 (245)
T ss_pred             hHHHHHHhhheeeee-cCcCcccCceeeecCCcc
Confidence            999999999999998 777899999998888765

>PRK12937 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.2e-34  Score=251.73  Aligned_cols=238  Identities=28%  Similarity=0.320  Sum_probs=196.0

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCCh-HHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSL-KAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~-~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      |++++|+++||||++|||+++++.|+++|++|+++.|+. ...++..+++...  +.++.++++|+++++++.++++++.
T Consensus         1 ~~~~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~   78 (245)
T PRK12937          1 MTLSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAA--GGRAIAVQADVADAAAVTRLFDAAE   78 (245)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHH
Confidence            467899999999999999999999999999998887654 4455555665543  5689999999999999999999999


Q ss_pred             hcCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcc
Q 019722          110 SLNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMI  187 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~  187 (336)
                      +.++++|++|||||.....  .+.+.+++++++++|+.+++.++++++|.|.+       .++||++||.++..+     
T Consensus        79 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-------~~~iv~~ss~~~~~~-----  146 (245)
T PRK12937         79 TAFGRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQ-------GGRIINLSTSVIALP-----  146 (245)
T ss_pred             HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhcc-------CcEEEEEeeccccCC-----
Confidence            9999999999999976432  45677889999999999999999999999854       379999999776554     


Q ss_pred             cccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCcc--chhHHHHHHHHHHhhc
Q 019722          188 RYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRER--EGFITDLVFFLTSKLL  265 (336)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~--~~~~~~~~~~~~~~~~  265 (336)
                                  .+++..|+.+|++++.++++++.++.+.+  |++++|+||++.|++....  ...........+....
T Consensus       147 ------------~~~~~~Y~~sK~a~~~~~~~~a~~~~~~~--i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~  212 (245)
T PRK12937        147 ------------LPGYGPYAASKAAVEGLVHVLANELRGRG--ITVNAVAPGPVATELFFNGKSAEQIDQLAGLAPLERL  212 (245)
T ss_pred             ------------CCCCchhHHHHHHHHHHHHHHHHHhhhcC--eEEEEEEeCCccCchhcccCCHHHHHHHHhcCCCCCC
Confidence                        56677899999999999999999999877  9999999999999985432  1222222222233455


Q ss_pred             CChHHHHHHHHHHHhcCccccCCceeeccCcc
Q 019722          266 KTIPQGAATTCYVAIHPRLVNVSGKYFADCNE  297 (336)
Q Consensus       266 ~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~  297 (336)
                      .++++++..++|++. +...+++|+++..+|+
T Consensus       213 ~~~~d~a~~~~~l~~-~~~~~~~g~~~~~~~g  243 (245)
T PRK12937        213 GTPEEIAAAVAFLAG-PDGAWVNGQVLRVNGG  243 (245)
T ss_pred             CCHHHHHHHHHHHcC-ccccCccccEEEeCCC
Confidence            689999999999986 5667899999988765

>PRK12742 oxidoreductase; Provisional

Probab=100.00  E-value=9.9e-34  Score=250.05  Aligned_cols=230  Identities=22%  Similarity=0.253  Sum_probs=183.6

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeC-ChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGARLVLPAR-SLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      .++++|++|||||++|||++++++|+++|++|++++| +.+..+++.+++       .+.++.+|+++.+++.+++++  
T Consensus         2 ~~~~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~-------~~~~~~~D~~~~~~~~~~~~~--   72 (237)
T PRK12742          2 GAFTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQET-------GATAVQTDSADRDAVIDVVRK--   72 (237)
T ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHh-------CCeEEecCCCCHHHHHHHHHH--
Confidence            4588999999999999999999999999999998876 444444433321       356788999999988877653  


Q ss_pred             hcCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcc
Q 019722          110 SLNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMI  187 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~  187 (336)
                        ++++|++|||||.....  .+.+.++|++++++|+.+++.+++.+.+.|.+       .++||++||..+...+    
T Consensus        73 --~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-------~g~iv~isS~~~~~~~----  139 (237)
T PRK12742         73 --SGALDILVVNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPE-------GGRIIIIGSVNGDRMP----  139 (237)
T ss_pred             --hCCCcEEEECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhc-------CCeEEEEeccccccCC----
Confidence              56899999999976432  46678899999999999999999999999864       3799999998763211    


Q ss_pred             cccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHHHHHHHHhhcCC
Q 019722          188 RYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSKLLKT  267 (336)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~  267 (336)
                                  .++...|+++|++++.+++.++.++.+.|  |+||+|+||+++|++...............+..+..+
T Consensus       140 ------------~~~~~~Y~~sKaa~~~~~~~la~~~~~~g--i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~  205 (237)
T PRK12742        140 ------------VAGMAAYAASKSALQGMARGLARDFGPRG--ITINVVQPGPIDTDANPANGPMKDMMHSFMAIKRHGR  205 (237)
T ss_pred             ------------CCCCcchHHhHHHHHHHHHHHHHHHhhhC--eEEEEEecCcccCCccccccHHHHHHHhcCCCCCCCC
Confidence                        45567899999999999999999999887  9999999999999986543222111112223345678


Q ss_pred             hHHHHHHHHHHHhcCccccCCceeeccCcc
Q 019722          268 IPQGAATTCYVAIHPRLVNVSGKYFADCNE  297 (336)
Q Consensus       268 ~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~  297 (336)
                      |+|++..++|+++ +.+.+++|+.+..+|+
T Consensus       206 p~~~a~~~~~l~s-~~~~~~~G~~~~~dgg  234 (237)
T PRK12742        206 PEEVAGMVAWLAG-PEASFVTGAMHTIDGA  234 (237)
T ss_pred             HHHHHHHHHHHcC-cccCcccCCEEEeCCC
Confidence            9999999999986 6778999999988876

>PRK05876 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.4e-34  Score=257.20  Aligned_cols=226  Identities=21%  Similarity=0.230  Sum_probs=188.0

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      |.+|+||++|||||++|||++++++|+++|++|++++|+.+.+++..+++...  +.++.++++|+++++++.++++++.
T Consensus         1 ~~~~~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~   78 (275)
T PRK05876          1 MDGFPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAE--GFDVHGVMCDVRHREEVTHLADEAF   78 (275)
T ss_pred             CCCcCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEeCCCCCHHHHHHHHHHHH
Confidence            34689999999999999999999999999999999999998888888777654  4578999999999999999999999


Q ss_pred             hcCCCccEEEEcccCCCC--CCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcc
Q 019722          110 SLNLPLNLLINNAGKFAH--QHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMI  187 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~  187 (336)
                      +.++++|+||||||+...  ..+.+.++|++++++|+.+++.++++++|.|.+++.    +|+||++||.++..+     
T Consensus        79 ~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~----~g~iv~isS~~~~~~-----  149 (275)
T PRK05876         79 RLLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGT----GGHVVFTASFAGLVP-----  149 (275)
T ss_pred             HHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCC----CCEEEEeCChhhccC-----
Confidence            999999999999997543  256788999999999999999999999999977531    479999999887665     


Q ss_pred             cccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHH-------H--HHH
Q 019722          188 RYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFIT-------D--LVF  258 (336)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~-------~--~~~  258 (336)
                                  .++...|+++|+++.+|+++++.|+.+.|  |+|++|+||+++|++.........       .  ...
T Consensus       150 ------------~~~~~~Y~asK~a~~~~~~~l~~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~  215 (275)
T PRK05876        150 ------------NAGLGAYGVAKYGVVGLAETLAREVTADG--IGVSVLCPMVVETNLVANSERIRGAACAQSSTTGSPG  215 (275)
T ss_pred             ------------CCCCchHHHHHHHHHHHHHHHHHHhhhcC--cEEEEEEeCccccccccchhhhcCccccccccccccc
Confidence                        56677899999999999999999998877  999999999999998654211000       0  000


Q ss_pred             HH-HHhhcCChHHHHHHHHHHHh
Q 019722          259 FL-TSKLLKTIPQGAATTCYVAI  280 (336)
Q Consensus       259 ~~-~~~~~~~~~~~a~~~~~l~~  280 (336)
                      .. ......+|+++|+.++..+.
T Consensus       216 ~~~~~~~~~~~~dva~~~~~ai~  238 (275)
T PRK05876        216 PLPLQDDNLGVDDIAQLTADAIL  238 (275)
T ss_pred             cccccccCCCHHHHHHHHHHHHH
Confidence            00 11224578999999988876

>PRK06500 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.6e-34  Score=252.55  Aligned_cols=235  Identities=26%  Similarity=0.290  Sum_probs=194.7

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHh
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHS  110 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  110 (336)
                      .+++||+++||||+++||++++++|+++|++|++++|+.+..++..+++     +.++.++++|+++.+++..+++.+.+
T Consensus         2 ~~~~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~   76 (249)
T PRK06500          2 SRLQGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAEL-----GESALVIRADAGDVAAQKALAQALAE   76 (249)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHh-----CCceEEEEecCCCHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999999987666555443     45788999999999999999999999


Q ss_pred             cCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccc
Q 019722          111 LNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIR  188 (336)
Q Consensus       111 ~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~  188 (336)
                      .++++|++|||||.....  .+.+.+++++++++|+.+++.+++++.|+|.+       .+++|+++|..+..+      
T Consensus        77 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-------~~~~i~~~S~~~~~~------  143 (249)
T PRK06500         77 AFGRLDAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLAN-------PASIVLNGSINAHIG------  143 (249)
T ss_pred             HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc-------CCEEEEEechHhccC------
Confidence            889999999999975432  45678899999999999999999999999854       368999999777665      


Q ss_pred             ccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccc---hhHHHHHH----HHH
Q 019722          189 YLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRERE---GFITDLVF----FLT  261 (336)
Q Consensus       189 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~---~~~~~~~~----~~~  261 (336)
                                 .+....|+.+|++++.++++++.++.+.|  |++++|+||.++|++.+...   ........    ..+
T Consensus       144 -----------~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~  210 (249)
T PRK06500        144 -----------MPNSSVYAASKAALLSLAKTLSGELLPRG--IRVNAVSPGPVQTPLYGKLGLPEATLDAVAAQIQALVP  210 (249)
T ss_pred             -----------CCCccHHHHHHHHHHHHHHHHHHHhhhcC--eEEEEEeeCcCCCHHHHhhccCccchHHHHHHHHhcCC
Confidence                       45567899999999999999999998877  99999999999999865421   11111111    112


Q ss_pred             HhhcCChHHHHHHHHHHHhcCccccCCceeeccCcc
Q 019722          262 SKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNE  297 (336)
Q Consensus       262 ~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~  297 (336)
                      ......+++++.++++++. +...+++|+.+..+|+
T Consensus       211 ~~~~~~~~~va~~~~~l~~-~~~~~~~g~~i~~~gg  245 (249)
T PRK06500        211 LGRFGTPEEIAKAVLYLAS-DESAFIVGSEIIVDGG  245 (249)
T ss_pred             CCCCcCHHHHHHHHHHHcC-ccccCccCCeEEECCC
Confidence            2345689999999999887 5567999999988876

>TIGR02415 23BDH acetoin reductases

Probab=100.00  E-value=1.2e-33  Score=252.05  Aligned_cols=237  Identities=22%  Similarity=0.238  Sum_probs=200.0

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCCCc
Q 019722           36 VTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLPL  115 (336)
Q Consensus        36 k~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i  115 (336)
                      |+++||||+++||.+++++|+++|++|++++|+.+.+++..+++...  +.++.++.+|+++++++.++++++.+.++++
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~i   78 (254)
T TIGR02415         1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQA--GGKAVAYKLDVSDKDQVFSAIDQAAEKFGGF   78 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            68999999999999999999999999999999988888777777654  5679999999999999999999999999999


Q ss_pred             cEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcccccccc
Q 019722          116 NLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQI  193 (336)
Q Consensus       116 d~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~~~  193 (336)
                      |++|||||.....  .+.+.++|++++++|+.+++.+++.+++.|++.+.    +++||++||..+..+           
T Consensus        79 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~----~~~iv~~sS~~~~~~-----------  143 (254)
T TIGR02415        79 DVMVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGH----GGKIINAASIAGHEG-----------  143 (254)
T ss_pred             CEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCC----CeEEEEecchhhcCC-----------
Confidence            9999999976542  56778999999999999999999999999987532    379999999887765           


Q ss_pred             cCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchh------------HHHHHHHHH
Q 019722          194 SRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGF------------ITDLVFFLT  261 (336)
Q Consensus       194 ~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~------------~~~~~~~~~  261 (336)
                            .+.+..|+.+|++++.+++.++.++.+.+  |+|++|+||+++|++++.....            ........+
T Consensus       144 ------~~~~~~Y~~sK~a~~~~~~~l~~~~~~~~--i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (254)
T TIGR02415       144 ------NPILSAYSSTKFAVRGLTQTAAQELAPKG--ITVNAYCPGIVKTPMWEEIDEETSEIAGKPIGEGFEEFSSEIA  215 (254)
T ss_pred             ------CCCCcchHHHHHHHHHHHHHHHHHhcccC--eEEEEEecCcccChhhhhhhhhhhhcccCchHHHHHHHHhhCC
Confidence                  55677899999999999999999999877  9999999999999987653211            111112223


Q ss_pred             HhhcCChHHHHHHHHHHHhcCccccCCceeeccCccc
Q 019722          262 SKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEA  298 (336)
Q Consensus       262 ~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  298 (336)
                      ..+..+|+++++++++++. +...+++|+++..+|+.
T Consensus       216 ~~~~~~~~~~a~~~~~l~~-~~~~~~~g~~~~~d~g~  251 (254)
T TIGR02415       216 LGRPSEPEDVAGLVSFLAS-EDSDYITGQSILVDGGM  251 (254)
T ss_pred             CCCCCCHHHHHHHHHhhcc-cccCCccCcEEEecCCc
Confidence            3456789999999999988 55678899999988864

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=100.00  E-value=1.2e-33  Score=250.00  Aligned_cols=233  Identities=21%  Similarity=0.258  Sum_probs=193.9

Q ss_pred             EEEeCCCChHHHHHHHHHHHCCCEEEEeeCC-hHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCCCcc
Q 019722           38 AIITGATSGIGAETARVLAKRGARLVLPARS-LKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLPLN  116 (336)
Q Consensus        38 ~lItGgs~gIG~aia~~L~~~G~~V~~~~r~-~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id  116 (336)
                      ++||||++|||++++++|+++|++|++++|+ .+..+...++++..  +.++.++++|+++++++..+++++.+.++++|
T Consensus         1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~   78 (239)
T TIGR01831         1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQ--GGNARLLQFDVADRVACRTLLEADIAEHGAYY   78 (239)
T ss_pred             CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHc--CCeEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            5899999999999999999999999998865 45566666666654  46799999999999999999999888889999


Q ss_pred             EEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHH-HHHHHhhccCCCCCeEEEEcCCccccccCCcccccccc
Q 019722          117 LLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLL-KKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQI  193 (336)
Q Consensus       117 ~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~-~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~~~  193 (336)
                      ++|+|||.....  .+.+.++|+.++++|+.+++.+++.++ |.+.+++     .++||++||..+..+           
T Consensus        79 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-----~~~iv~vsS~~~~~~-----------  142 (239)
T TIGR01831        79 GVVLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQ-----GGRIITLASVSGVMG-----------  142 (239)
T ss_pred             EEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcC-----CeEEEEEcchhhccC-----------
Confidence            999999976543  456788999999999999999999886 4444333     479999999887766           


Q ss_pred             cCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHHHHHHHHhhcCChHHHHH
Q 019722          194 SRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSKLLKTIPQGAA  273 (336)
Q Consensus       194 ~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~  273 (336)
                            .+....|+++|++++.++++++.++...|  |+||+|+||+++|++.+.............+..+...|++++.
T Consensus       143 ------~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~va~  214 (239)
T TIGR01831       143 ------NRGQVNYSAAKAGLIGATKALAVELAKRK--ITVNCIAPGLIDTEMLAEVEHDLDEALKTVPMNRMGQPAEVAS  214 (239)
T ss_pred             ------CCCCcchHHHHHHHHHHHHHHHHHHhHhC--eEEEEEEEccCccccchhhhHHHHHHHhcCCCCCCCCHHHHHH
Confidence                  55667899999999999999999999877  9999999999999998764433333333344456778999999


Q ss_pred             HHHHHHhcCccccCCceeeccCcc
Q 019722          274 TTCYVAIHPRLVNVSGKYFADCNE  297 (336)
Q Consensus       274 ~~~~l~~~~~~~~~~G~~~~~~~~  297 (336)
                      .++|++. +...+++|+.+..+|+
T Consensus       215 ~~~~l~~-~~~~~~~g~~~~~~gg  237 (239)
T TIGR01831       215 LAGFLMS-DGASYVTRQVISVNGG  237 (239)
T ss_pred             HHHHHcC-chhcCccCCEEEecCC
Confidence            9999987 6678999999888775

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.4e-33  Score=251.05  Aligned_cols=240  Identities=21%  Similarity=0.217  Sum_probs=197.3

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEE-eeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhc
Q 019722           33 LSSVTAIITGATSGIGAETARVLAKRGARLVL-PARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSL  111 (336)
Q Consensus        33 l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~-~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  111 (336)
                      |++|++|||||++|||++++++|+++|++|++ ..|+.+..++..++++..  +.++.++.+|+++++++.++++++.+.
T Consensus         2 ~~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   79 (250)
T PRK08063          2 FSGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEAL--GRKALAVKANVGDVEKIKEMFAQIDEE   79 (250)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc--CCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            56899999999999999999999999999876 578888887777777654  567999999999999999999999998


Q ss_pred             CCCccEEEEcccCCCC--CCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcccc
Q 019722          112 NLPLNLLINNAGKFAH--QHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRY  189 (336)
Q Consensus       112 ~~~id~lv~nAg~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~  189 (336)
                      ++++|+||||||....  ..+.+.++++..+++|+.+++.+++++++.|++++     .|+||++||..+..+       
T Consensus        80 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-----~g~iv~~sS~~~~~~-------  147 (250)
T PRK08063         80 FGRLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVG-----GGKIISLSSLGSIRY-------  147 (250)
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-----CeEEEEEcchhhccC-------
Confidence            9999999999996543  25667888999999999999999999999998764     479999999766544       


Q ss_pred             cccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHH---HHHHHHHHhhcC
Q 019722          190 LGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFIT---DLVFFLTSKLLK  266 (336)
Q Consensus       190 ~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~---~~~~~~~~~~~~  266 (336)
                                .+....|+++|++++.++++++.++.+.|  |++|+|+||++.|++.........   ......+.....
T Consensus       148 ----------~~~~~~y~~sK~a~~~~~~~~~~~~~~~~--i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (250)
T PRK08063        148 ----------LENYTTVGVSKAALEALTRYLAVELAPKG--IAVNAVSGGAVDTDALKHFPNREELLEDARAKTPAGRMV  215 (250)
T ss_pred             ----------CCCccHHHHHHHHHHHHHHHHHHHHhHhC--eEEEeEecCcccCchhhhccCchHHHHHHhcCCCCCCCc
Confidence                      45667899999999999999999998877  999999999999998654322111   111111223356


Q ss_pred             ChHHHHHHHHHHHhcCccccCCceeeccCcccc
Q 019722          267 TIPQGAATTCYVAIHPRLVNVSGKYFADCNEAW  299 (336)
Q Consensus       267 ~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  299 (336)
                      +++|++..+++++. +...+++|+.+..+|+..
T Consensus       216 ~~~dva~~~~~~~~-~~~~~~~g~~~~~~gg~~  247 (250)
T PRK08063        216 EPEDVANAVLFLCS-PEADMIRGQTIIVDGGRS  247 (250)
T ss_pred             CHHHHHHHHHHHcC-chhcCccCCEEEECCCee
Confidence            78999999999887 445678999998888643

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=100.00  E-value=2.2e-33  Score=251.34  Aligned_cols=240  Identities=18%  Similarity=0.192  Sum_probs=196.5

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCCC
Q 019722           35 SVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLP  114 (336)
Q Consensus        35 gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  114 (336)
                      +|++|||||+++||.+++++|+++|++|++++|+....+...+++.......++.++.+|+++.+++.++++++.+.+++
T Consensus         2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   81 (259)
T PRK12384          2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFGR   81 (259)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            68999999999999999999999999999999998888877777766543357999999999999999999999998999


Q ss_pred             ccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccccccc
Q 019722          115 LNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQ  192 (336)
Q Consensus       115 id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~~  192 (336)
                      +|++|||||.....  .+.+.++|++.+++|+.+++.+++++.+.|.+++.    .++||++||..+..+          
T Consensus        82 id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~----~~~iv~~ss~~~~~~----------  147 (259)
T PRK12384         82 VDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGI----QGRIIQINSKSGKVG----------  147 (259)
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCC----CcEEEEecCcccccC----------
Confidence            99999999976543  56678899999999999999999999999986531    379999999876654          


Q ss_pred             ccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCce-eCCCCCccchh--------HHHH----HHH
Q 019722          193 ISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIV-RTRLTREREGF--------ITDL----VFF  259 (336)
Q Consensus       193 ~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v-~T~~~~~~~~~--------~~~~----~~~  259 (336)
                             .+....|++||+++++++++++.++.+.|  |+||+|+||.+ .|++.......        ..+.    ...
T Consensus       148 -------~~~~~~Y~~sKaa~~~l~~~la~e~~~~g--i~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  218 (259)
T PRK12384        148 -------SKHNSGYSAAKFGGVGLTQSLALDLAEYG--ITVHSLMLGNLLKSPMFQSLLPQYAKKLGIKPDEVEQYYIDK  218 (259)
T ss_pred             -------CCCCchhHHHHHHHHHHHHHHHHHHHHcC--cEEEEEecCCcccchhhhhhhHHHHHhcCCChHHHHHHHHHh
Confidence                   34456799999999999999999999887  99999999975 66665432110        0111    112


Q ss_pred             HHHhhcCChHHHHHHHHHHHhcCccccCCceeeccCccc
Q 019722          260 LTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEA  298 (336)
Q Consensus       260 ~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  298 (336)
                      .+..+...++|++.+++++++ ....+++|+.+..+++.
T Consensus       219 ~~~~~~~~~~dv~~~~~~l~~-~~~~~~~G~~~~v~~g~  256 (259)
T PRK12384        219 VPLKRGCDYQDVLNMLLFYAS-PKASYCTGQSINVTGGQ  256 (259)
T ss_pred             CcccCCCCHHHHHHHHHHHcC-cccccccCceEEEcCCE
Confidence            233445689999999999987 55678999998888764

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=2.6e-33  Score=249.30  Aligned_cols=240  Identities=28%  Similarity=0.293  Sum_probs=200.9

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHh
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHS  110 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  110 (336)
                      ++++++++|||||+++||.+++++|+++|++|++++|+.++.++....+..   +.++.++++|++++++++.+++++.+
T Consensus         1 ~~~~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~   77 (251)
T PRK07231          1 MRLEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILA---GGRAIAVAADVSDEADVEAAVAAALE   77 (251)
T ss_pred             CCcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc---CCeEEEEECCCCCHHHHHHHHHHHHH
Confidence            468899999999999999999999999999999999999887777666644   45789999999999999999999988


Q ss_pred             cCCCccEEEEcccCCCCC---CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcc
Q 019722          111 LNLPLNLLINNAGKFAHQ---HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMI  187 (336)
Q Consensus       111 ~~~~id~lv~nAg~~~~~---~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~  187 (336)
                      .++++|++|||||.....   .+.+.+++++.+++|+.+++.+++.+.+.+.++.     .+++|++||..+..+     
T Consensus        78 ~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-----~~~iv~~sS~~~~~~-----  147 (251)
T PRK07231         78 RFGSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEG-----GGAIVNVASTAGLRP-----  147 (251)
T ss_pred             HhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-----CcEEEEEcChhhcCC-----
Confidence            889999999999975432   4567889999999999999999999999998754     479999999877654     


Q ss_pred             cccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccch-----hHHHHHHHHHH
Q 019722          188 RYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREG-----FITDLVFFLTS  262 (336)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~-----~~~~~~~~~~~  262 (336)
                                  .++...|+.+|++++.+++.++.++.+.+  |++++|+||++.|++......     .........+.
T Consensus       148 ------------~~~~~~y~~sk~~~~~~~~~~a~~~~~~~--i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~  213 (251)
T PRK07231        148 ------------RPGLGWYNASKGAVITLTKALAAELGPDK--IRVNAVAPVVVETGLLEAFMGEPTPENRAKFLATIPL  213 (251)
T ss_pred             ------------CCCchHHHHHHHHHHHHHHHHHHHhhhhC--eEEEEEEECccCCCcchhhhcccChHHHHHHhcCCCC
Confidence                        56677899999999999999999998877  999999999999998765432     11111122223


Q ss_pred             hhcCChHHHHHHHHHHHhcCccccCCceeeccCccc
Q 019722          263 KLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEA  298 (336)
Q Consensus       263 ~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  298 (336)
                      .....+++++.++++++. +...+++|+++..+|+.
T Consensus       214 ~~~~~~~dva~~~~~l~~-~~~~~~~g~~~~~~gg~  248 (251)
T PRK07231        214 GRLGTPEDIANAALFLAS-DEASWITGVTLVVDGGR  248 (251)
T ss_pred             CCCcCHHHHHHHHHHHhC-ccccCCCCCeEEECCCc
Confidence            345688999999999996 55578899999888764

>PRK09186 flagellin modification protein A; Provisional

Probab=100.00  E-value=1.6e-33  Score=251.55  Aligned_cols=248  Identities=19%  Similarity=0.218  Sum_probs=196.8

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcC
Q 019722           33 LSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLN  112 (336)
Q Consensus        33 l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  112 (336)
                      ++||+++||||++|||+++|+.|+++|++|++++|+++++++..+++....++..+.++++|++|++++.++++++.+.+
T Consensus         2 ~~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~   81 (256)
T PRK09186          2 LKGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKY   81 (256)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHc
Confidence            57899999999999999999999999999999999998888888877654444567788999999999999999998889


Q ss_pred             CCccEEEEcccCCC-----CCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcc
Q 019722          113 LPLNLLINNAGKFA-----HQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMI  187 (336)
Q Consensus       113 ~~id~lv~nAg~~~-----~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~  187 (336)
                      +++|++|||||...     ...+.+.+.++..+++|+.+++.++++++|.|++++     .++||++||..+...+... 
T Consensus        82 ~~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-----~~~iv~~sS~~~~~~~~~~-  155 (256)
T PRK09186         82 GKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQG-----GGNLVNISSIYGVVAPKFE-  155 (256)
T ss_pred             CCccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcC-----CceEEEEechhhhccccch-
Confidence            99999999998542     225677889999999999999999999999998764     4799999997765432100 


Q ss_pred             cccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHHHHHHHHhhcCC
Q 019722          188 RYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSKLLKT  267 (336)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~  267 (336)
                      .+      ..........|+++|+++++++++++.++.+.+  |+||+|+||.+.++....   .........+.....+
T Consensus       156 ~~------~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~--i~v~~i~Pg~~~~~~~~~---~~~~~~~~~~~~~~~~  224 (256)
T PRK09186        156 IY------EGTSMTSPVEYAAIKAGIIHLTKYLAKYFKDSN--IRVNCVSPGGILDNQPEA---FLNAYKKCCNGKGMLD  224 (256)
T ss_pred             hc------cccccCCcchhHHHHHHHHHHHHHHHHHhCcCC--eEEEEEecccccCCCCHH---HHHHHHhcCCccCCCC
Confidence            00      000012233699999999999999999998877  999999999998765221   1111112222345678


Q ss_pred             hHHHHHHHHHHHhcCccccCCceeeccCccc
Q 019722          268 IPQGAATTCYVAIHPRLVNVSGKYFADCNEA  298 (336)
Q Consensus       268 ~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  298 (336)
                      ++|++..+++++. +...+++|+++..+++.
T Consensus       225 ~~dva~~~~~l~~-~~~~~~~g~~~~~~~g~  254 (256)
T PRK09186        225 PDDICGTLVFLLS-DQSKYITGQNIIVDDGF  254 (256)
T ss_pred             HHHhhhhHhheec-cccccccCceEEecCCc
Confidence            9999999999987 55678999999888763

>PRK05599 hypothetical protein; Provisional

Probab=100.00  E-value=1.5e-33  Score=250.76  Aligned_cols=212  Identities=22%  Similarity=0.236  Sum_probs=180.5

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCCCc
Q 019722           36 VTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLPL  115 (336)
Q Consensus        36 k~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i  115 (336)
                      ++++||||++|||++++++|+ +|++|++++|+.+++++..+++++.. ..++.+++||++|+++++++++++.+.++++
T Consensus         1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   78 (246)
T PRK05599          1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRG-ATSVHVLSFDAQDLDTHRELVKQTQELAGEI   78 (246)
T ss_pred             CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcc-CCceEEEEcccCCHHHHHHHHHHHHHhcCCC
Confidence            579999999999999999999 59999999999999998888887642 2358899999999999999999999989999


Q ss_pred             cEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcccccccc
Q 019722          116 NLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQI  193 (336)
Q Consensus       116 d~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~~~  193 (336)
                      |++|||||+....  .+.+.+.+++++++|+.+.+.+++.++|.|.++..    +|+||++||.++..+           
T Consensus        79 d~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~----~g~Iv~isS~~~~~~-----------  143 (246)
T PRK05599         79 SLAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTA----PAAIVAFSSIAGWRA-----------  143 (246)
T ss_pred             CEEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCC----CCEEEEEeccccccC-----------
Confidence            9999999986442  34556677888999999999999999999976521    489999999987765           


Q ss_pred             cCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHHHHHHHHhhcCChHHHHH
Q 019722          194 SRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSKLLKTIPQGAA  273 (336)
Q Consensus       194 ~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~  273 (336)
                            .++...|+++|+++++|+++++.|+.+.|  |+||+|+||+++|++......          .....+|+++|.
T Consensus       144 ------~~~~~~Y~asKaa~~~~~~~la~el~~~~--I~v~~v~PG~v~T~~~~~~~~----------~~~~~~pe~~a~  205 (246)
T PRK05599        144 ------RRANYVYGSTKAGLDAFCQGLADSLHGSH--VRLIIARPGFVIGSMTTGMKP----------APMSVYPRDVAA  205 (246)
T ss_pred             ------CcCCcchhhHHHHHHHHHHHHHHHhcCCC--ceEEEecCCcccchhhcCCCC----------CCCCCCHHHHHH
Confidence                  55677899999999999999999999877  999999999999998654321          011357999999


Q ss_pred             HHHHHHhcC
Q 019722          274 TTCYVAIHP  282 (336)
Q Consensus       274 ~~~~l~~~~  282 (336)
                      .+++++...
T Consensus       206 ~~~~~~~~~  214 (246)
T PRK05599        206 AVVSAITSS  214 (246)
T ss_pred             HHHHHHhcC
Confidence            999999854

>PRK06484 short chain dehydrogenase; Validated

Probab=100.00  E-value=1.3e-33  Score=277.20  Aligned_cols=237  Identities=26%  Similarity=0.314  Sum_probs=198.0

Q ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhc
Q 019722           32 NLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSL  111 (336)
Q Consensus        32 ~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  111 (336)
                      .++||++|||||++|||++++++|+++|++|++++|+.+++++..+++     +.++.++++|+++++++.++++++.+.
T Consensus         2 ~~~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~   76 (520)
T PRK06484          2 KAQSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSL-----GPDHHALAMDVSDEAQIREGFEQLHRE   76 (520)
T ss_pred             CCCCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCceeEEEeccCCHHHHHHHHHHHHHH
Confidence            467999999999999999999999999999999999988877666554     457888999999999999999999999


Q ss_pred             CCCccEEEEcccCCCC----CCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcc
Q 019722          112 NLPLNLLINNAGKFAH----QHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMI  187 (336)
Q Consensus       112 ~~~id~lv~nAg~~~~----~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~  187 (336)
                      ++++|+||||||+...    ..+.+.++|++++++|+.+++.++++++|.|++++.    +++||++||..+..+     
T Consensus        77 ~g~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~----g~~iv~isS~~~~~~-----  147 (520)
T PRK06484         77 FGRIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGH----GAAIVNVASGAGLVA-----  147 (520)
T ss_pred             hCCCCEEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC----CCeEEEECCcccCCC-----
Confidence            9999999999997422    256788999999999999999999999999987541    249999999988765     


Q ss_pred             cccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchh----HHHHHHHHHHh
Q 019722          188 RYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGF----ITDLVFFLTSK  263 (336)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~----~~~~~~~~~~~  263 (336)
                                  .+....|+++|+++++|+++++.|+.+.+  |+||+|+||+++|++.......    ........+..
T Consensus       148 ------------~~~~~~Y~asKaal~~l~~~la~e~~~~~--i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~  213 (520)
T PRK06484        148 ------------LPKRTAYSASKAAVISLTRSLACEWAAKG--IRVNAVLPGYVRTQMVAELERAGKLDPSAVRSRIPLG  213 (520)
T ss_pred             ------------CCCCchHHHHHHHHHHHHHHHHHHhhhhC--eEEEEEccCCcCchhhhhhcccchhhhHHHHhcCCCC
Confidence                        55667899999999999999999999887  9999999999999987643211    11111122333


Q ss_pred             hcCChHHHHHHHHHHHhcCccccCCceeeccCcc
Q 019722          264 LLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNE  297 (336)
Q Consensus       264 ~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~  297 (336)
                      ....|++++..++|+++ +...+++|+.+..++.
T Consensus       214 ~~~~~~~va~~v~~l~~-~~~~~~~G~~~~~~gg  246 (520)
T PRK06484        214 RLGRPEEIAEAVFFLAS-DQASYITGSTLVVDGG  246 (520)
T ss_pred             CCcCHHHHHHHHHHHhC-ccccCccCceEEecCC
Confidence            45689999999999987 5567889998877765

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=100.00  E-value=2.9e-33  Score=248.04  Aligned_cols=239  Identities=27%  Similarity=0.362  Sum_probs=198.0

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      |+++++|++|||||+++||++++++|+++|+.|++.+|+.+++++....+     +.++.++.+|+++.++++.+++++.
T Consensus         1 ~~~~~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~   75 (245)
T PRK12936          1 MFDLSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAEL-----GERVKIFPANLSDRDEVKALGQKAE   75 (245)
T ss_pred             CcCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh-----CCceEEEEccCCCHHHHHHHHHHHH
Confidence            45789999999999999999999999999999999999988776655443     3578899999999999999999999


Q ss_pred             hcCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcc
Q 019722          110 SLNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMI  187 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~  187 (336)
                      +.++++|++|||||.....  .+.+.+++++++++|+.+++.+++++.+.+.++.     .+++|++||..+..+     
T Consensus        76 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-----~~~iv~~sS~~~~~~-----  145 (245)
T PRK12936         76 ADLEGVDILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRR-----YGRIINITSVVGVTG-----  145 (245)
T ss_pred             HHcCCCCEEEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhC-----CCEEEEECCHHhCcC-----
Confidence            9899999999999976432  4567788999999999999999999999887654     479999999877765     


Q ss_pred             cccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHH-HHHHHHHhhcC
Q 019722          188 RYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITD-LVFFLTSKLLK  266 (336)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~-~~~~~~~~~~~  266 (336)
                                  .+....|+.+|+++..+++.++.++.+.+  |++++|+||+++|++.......... .....+..+..
T Consensus       146 ------------~~~~~~Y~~sk~a~~~~~~~la~~~~~~~--i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~  211 (245)
T PRK12936        146 ------------NPGQANYCASKAGMIGFSKSLAQEIATRN--VTVNCVAPGFIESAMTGKLNDKQKEAIMGAIPMKRMG  211 (245)
T ss_pred             ------------CCCCcchHHHHHHHHHHHHHHHHHhhHhC--eEEEEEEECcCcCchhcccChHHHHHHhcCCCCCCCc
Confidence                        45566899999999999999999998877  9999999999999987654322211 11122334456


Q ss_pred             ChHHHHHHHHHHHhcCccccCCceeeccCccc
Q 019722          267 TIPQGAATTCYVAIHPRLVNVSGKYFADCNEA  298 (336)
Q Consensus       267 ~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  298 (336)
                      .+++++..+++++. +...+++|+.+..+++.
T Consensus       212 ~~~~ia~~~~~l~~-~~~~~~~G~~~~~~~g~  242 (245)
T PRK12936        212 TGAEVASAVAYLAS-SEAAYVTGQTIHVNGGM  242 (245)
T ss_pred             CHHHHHHHHHHHcC-ccccCcCCCEEEECCCc
Confidence            78999999999986 55568999999888764

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=4.5e-33  Score=249.35  Aligned_cols=246  Identities=27%  Similarity=0.301  Sum_probs=199.6

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      -.+++||++|||||+++||.+++++|+++|++|++++|+.++.+...+.+...  +.++.++++|++|+++++++++++.
T Consensus         7 ~~~~~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~--~~~~~~~~~Dl~d~~~i~~~~~~~~   84 (259)
T PRK08213          7 LFDLSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEAL--GIDALWIAADVADEADIERLAEETL   84 (259)
T ss_pred             hhCcCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEEccCCCHHHHHHHHHHHH
Confidence            34688999999999999999999999999999999999988877777766543  4578899999999999999999999


Q ss_pred             hcCCCccEEEEcccCCCC--CCCCCchhhhhHHHHHHhHHHHHHHHHHHH-HHHhhccCCCCCeEEEEcCCccccccCCc
Q 019722          110 SLNLPLNLLINNAGKFAH--QHAISEDGIEMTFATNYLGHFLLTKLLLKK-MIETAKATGIQGRIVNVSSSIHSWFSGDM  186 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~-l~~~~~~~~~~grIV~vsS~~~~~~~~~~  186 (336)
                      +.++++|++|||||....  ..+.+.+.|++++++|+.+++.+++++.++ |.+++     .+++|++||..+..+.+..
T Consensus        85 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~-----~~~~v~~sS~~~~~~~~~~  159 (259)
T PRK08213         85 ERFGHVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRG-----YGRIINVASVAGLGGNPPE  159 (259)
T ss_pred             HHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcC-----CeEEEEECChhhccCCCcc
Confidence            888899999999996533  255677899999999999999999999998 65543     4799999997665542110


Q ss_pred             ccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccch-hHHHHHHHHHHhhc
Q 019722          187 IRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREG-FITDLVFFLTSKLL  265 (336)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~-~~~~~~~~~~~~~~  265 (336)
                                   .+....|+++|++++.+++++++++.+.|  |++|.|+||+++|++...... .........+....
T Consensus       160 -------------~~~~~~Y~~sKa~~~~~~~~~a~~~~~~g--i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~  224 (259)
T PRK08213        160 -------------VMDTIAYNTSKGAVINFTRALAAEWGPHG--IRVNAIAPGFFPTKMTRGTLERLGEDLLAHTPLGRL  224 (259)
T ss_pred             -------------ccCcchHHHHHHHHHHHHHHHHHHhcccC--EEEEEEecCcCCCcchhhhhHHHHHHHHhcCCCCCC
Confidence                         23456899999999999999999999887  999999999999998665322 11122122222334


Q ss_pred             CChHHHHHHHHHHHhcCccccCCceeeccCccc
Q 019722          266 KTIPQGAATTCYVAIHPRLVNVSGKYFADCNEA  298 (336)
Q Consensus       266 ~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  298 (336)
                      ..+++++..+++++. +...+++|+.+..+++.
T Consensus       225 ~~~~~va~~~~~l~~-~~~~~~~G~~~~~~~~~  256 (259)
T PRK08213        225 GDDEDLKGAALLLAS-DASKHITGQILAVDGGV  256 (259)
T ss_pred             cCHHHHHHHHHHHhC-ccccCccCCEEEECCCe
Confidence            578999999888886 66788999999888764

>PRK08703 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.9e-33  Score=246.77  Aligned_cols=230  Identities=20%  Similarity=0.202  Sum_probs=192.2

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCC--HHHHHHHHHHH
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSS--LSSVRNFVSQF  108 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~--~~~v~~~~~~~  108 (336)
                      -+|+||+++||||++|||++++++|+++|++|++++|+++..+...+++.... +..+.++++|+++  .+++.++++++
T Consensus         2 ~~l~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~i   80 (239)
T PRK08703          2 ATLSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAG-HPEPFAIRFDLMSAEEKEFEQFAATI   80 (239)
T ss_pred             CCCCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHcC-CCCcceEEeeecccchHHHHHHHHHH
Confidence            46889999999999999999999999999999999999988887777765432 3467888999976  56889999988


Q ss_pred             HhcC-CCccEEEEcccCCCC---CCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccC
Q 019722          109 HSLN-LPLNLLINNAGKFAH---QHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSG  184 (336)
Q Consensus       109 ~~~~-~~id~lv~nAg~~~~---~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~  184 (336)
                      .+.+ +++|++|||||....   ..+.+.++|++.+++|+.+++.++++++|.|.+.+     .+++|+++|..+..+  
T Consensus        81 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-----~~~iv~~ss~~~~~~--  153 (239)
T PRK08703         81 AEATQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSP-----DASVIFVGESHGETP--  153 (239)
T ss_pred             HHHhCCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCC-----CCEEEEEeccccccC--
Confidence            8877 789999999997532   35677889999999999999999999999998754     489999999876654  


Q ss_pred             CcccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCcc-chhHHHHHHHHHHh
Q 019722          185 DMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRER-EGFITDLVFFLTSK  263 (336)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~-~~~~~~~~~~~~~~  263 (336)
                                     .+.+..|++||++++.++++++.|+.+. .+|+||+|+||+++|++.... .+..        ..
T Consensus       154 ---------------~~~~~~Y~~sKaa~~~~~~~la~e~~~~-~~i~v~~v~pG~v~t~~~~~~~~~~~--------~~  209 (239)
T PRK08703        154 ---------------KAYWGGFGASKAALNYLCKVAADEWERF-GNLRANVLVPGPINSPQRIKSHPGEA--------KS  209 (239)
T ss_pred             ---------------CCCccchHHhHHHHHHHHHHHHHHhccC-CCeEEEEEecCcccCccccccCCCCC--------cc
Confidence                           5556789999999999999999999875 249999999999999986542 1111        01


Q ss_pred             hcCChHHHHHHHHHHHhcCccccCCceeec
Q 019722          264 LLKTIPQGAATTCYVAIHPRLVNVSGKYFA  293 (336)
Q Consensus       264 ~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~  293 (336)
                      ....+++++..++|+++ +.+.+++|+.+.
T Consensus       210 ~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~  238 (239)
T PRK08703        210 ERKSYGDVLPAFVWWAS-AESKGRSGEIVY  238 (239)
T ss_pred             ccCCHHHHHHHHHHHhC-ccccCcCCeEee
Confidence            23688999999999998 888999999875

>PRK07774 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.9e-33  Score=245.90  Aligned_cols=240  Identities=25%  Similarity=0.315  Sum_probs=196.0

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      |+++++|++|||||++|||++++++|+++|++|++++|+.+..++..+++...  +.++.++.+|+++.++++.+++++.
T Consensus         1 ~~~~~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~   78 (250)
T PRK07774          1 MGRFDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVAD--GGTAIAVQVDVSDPDSAKAMADATV   78 (250)
T ss_pred             CcccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHH
Confidence            45689999999999999999999999999999999999988777777766543  3468889999999999999999999


Q ss_pred             hcCCCccEEEEcccCCCC-----CCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccC
Q 019722          110 SLNLPLNLLINNAGKFAH-----QHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSG  184 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~~-----~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~  184 (336)
                      +.++++|+||||||....     ..+.+.+.+++++++|+.+++.++++++|.+.+.+     .++||++||..+..   
T Consensus        79 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-----~~~iv~~sS~~~~~---  150 (250)
T PRK07774         79 SAFGGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRG-----GGAIVNQSSTAAWL---  150 (250)
T ss_pred             HHhCCCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhC-----CcEEEEEecccccC---
Confidence            888999999999997542     14557788999999999999999999999998754     47999999976532   


Q ss_pred             CcccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccch--hHHHHHHHHHH
Q 019722          185 DMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREG--FITDLVFFLTS  262 (336)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~--~~~~~~~~~~~  262 (336)
                                       +...|++||++++.+++++++++...+  |+++.++||.+.|++......  .........+.
T Consensus       151 -----------------~~~~Y~~sK~a~~~~~~~l~~~~~~~~--i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~  211 (250)
T PRK07774        151 -----------------YSNFYGLAKVGLNGLTQQLARELGGMN--IRVNAIAPGPIDTEATRTVTPKEFVADMVKGIPL  211 (250)
T ss_pred             -----------------CccccHHHHHHHHHHHHHHHHHhCccC--eEEEEEecCcccCccccccCCHHHHHHHHhcCCC
Confidence                             235799999999999999999998777  999999999999998765321  11112222222


Q ss_pred             hhcCChHHHHHHHHHHHhcCccccCCceeeccCcccc
Q 019722          263 KLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAW  299 (336)
Q Consensus       263 ~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  299 (336)
                      ....++++++..+++++. +...+.+|+.+..+++..
T Consensus       212 ~~~~~~~d~a~~~~~~~~-~~~~~~~g~~~~v~~g~~  247 (250)
T PRK07774        212 SRMGTPEDLVGMCLFLLS-DEASWITGQIFNVDGGQI  247 (250)
T ss_pred             CCCcCHHHHHHHHHHHhC-hhhhCcCCCEEEECCCee
Confidence            335678999999988876 444567899998887643

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=100.00  E-value=7.3e-33  Score=246.36  Aligned_cols=239  Identities=25%  Similarity=0.287  Sum_probs=199.5

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcC
Q 019722           33 LSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLN  112 (336)
Q Consensus        33 l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  112 (336)
                      |++|++|||||+++||++++++|+++|++|++++|+.+..++..+.+...  +.++.++++|++++++++++++++.+.+
T Consensus         1 ~~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~d~~~~~~~~~~~~~~~~~~   78 (250)
T TIGR03206         1 LKDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAK--GGNAQAFACDITDRDSVDTAVAAAEQAL   78 (250)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            57899999999999999999999999999999999998887777766554  4579999999999999999999999888


Q ss_pred             CCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccccc
Q 019722          113 LPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYL  190 (336)
Q Consensus       113 ~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~  190 (336)
                      +++|++|||||.....  .+.+.+++++.+++|+.+++.+++++.+.|++.+     .+++|++||..+..+        
T Consensus        79 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-----~~~ii~iss~~~~~~--------  145 (250)
T TIGR03206        79 GPVDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERG-----AGRIVNIASDAARVG--------  145 (250)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-----CeEEEEECchhhccC--------
Confidence            9999999999975432  4556788999999999999999999999998754     479999999877654        


Q ss_pred             ccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccch-------hHHHHHHHHHHh
Q 019722          191 GQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREG-------FITDLVFFLTSK  263 (336)
Q Consensus       191 ~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~-------~~~~~~~~~~~~  263 (336)
                               .+....|+.+|++++.+++++++++.+.+  |+++.|+||.++|++......       .........+..
T Consensus       146 ---------~~~~~~Y~~sK~a~~~~~~~la~~~~~~~--i~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  214 (250)
T TIGR03206       146 ---------SSGEAVYAACKGGLVAFSKTMAREHARHG--ITVNVVCPGPTDTALLDDICGGAENPEKLREAFTRAIPLG  214 (250)
T ss_pred             ---------CCCCchHHHHHHHHHHHHHHHHHHHhHhC--cEEEEEecCcccchhHHhhhhccCChHHHHHHHHhcCCcc
Confidence                     45567899999999999999999998877  999999999999998654321       111112222333


Q ss_pred             hcCChHHHHHHHHHHHhcCccccCCceeeccCccc
Q 019722          264 LLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEA  298 (336)
Q Consensus       264 ~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  298 (336)
                      ....++|+|+.+++++. +...+++|+.+..+++.
T Consensus       215 ~~~~~~dva~~~~~l~~-~~~~~~~g~~~~~~~g~  248 (250)
T TIGR03206       215 RLGQPDDLPGAILFFSS-DDASFITGQVLSVSGGL  248 (250)
T ss_pred             CCcCHHHHHHHHHHHcC-cccCCCcCcEEEeCCCc
Confidence            45789999999999887 56788999999888763

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=100.00  E-value=1.2e-32  Score=244.76  Aligned_cols=240  Identities=25%  Similarity=0.310  Sum_probs=197.0

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEee-CChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGARLVLPA-RSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~-r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      .++++|+++||||++|||.+++++|+++|++|++.. |+++..++..+.+...  +.++.++++|+++++++.++++++.
T Consensus         2 ~~~~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~   79 (247)
T PRK12935          2 VQLNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKE--GHDVYAVQADVSKVEDANRLVEEAV   79 (247)
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHH
Confidence            457899999999999999999999999999998765 4556666666666543  4579999999999999999999999


Q ss_pred             hcCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcc
Q 019722          110 SLNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMI  187 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~  187 (336)
                      +.++++|++|||||.....  .+.+.+++++.+++|+.+++.++++++|.|.+.+     .+++|++||..+..+     
T Consensus        80 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-----~~~iv~~sS~~~~~~-----  149 (247)
T PRK12935         80 NHFGKVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAE-----EGRIISISSIIGQAG-----  149 (247)
T ss_pred             HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-----CcEEEEEcchhhcCC-----
Confidence            9899999999999986543  4567789999999999999999999999998654     479999999877654     


Q ss_pred             cccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchh-HHHHHHHHHHhhcC
Q 019722          188 RYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGF-ITDLVFFLTSKLLK  266 (336)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~-~~~~~~~~~~~~~~  266 (336)
                                  .++...|+++|++++.++++++.++.+.+  |+++.|+||.++|++....... ..............
T Consensus       150 ------------~~~~~~Y~~sK~a~~~~~~~l~~~~~~~~--i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~  215 (247)
T PRK12935        150 ------------GFGQTNYSAAKAGMLGFTKSLALELAKTN--VTVNAICPGFIDTEMVAEVPEEVRQKIVAKIPKKRFG  215 (247)
T ss_pred             ------------CCCCcchHHHHHHHHHHHHHHHHHHHHcC--cEEEEEEeCCCcChhhhhccHHHHHHHHHhCCCCCCc
Confidence                        44566899999999999999999998877  9999999999999987654321 22222222334567


Q ss_pred             ChHHHHHHHHHHHhcCccccCCceeeccCccc
Q 019722          267 TIPQGAATTCYVAIHPRLVNVSGKYFADCNEA  298 (336)
Q Consensus       267 ~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  298 (336)
                      .++|++.++++++. + ..+++|+.+..+++.
T Consensus       216 ~~edva~~~~~~~~-~-~~~~~g~~~~i~~g~  245 (247)
T PRK12935        216 QADEIAKGVVYLCR-D-GAYITGQQLNINGGL  245 (247)
T ss_pred             CHHHHHHHHHHHcC-c-ccCccCCEEEeCCCc
Confidence            89999999999986 3 357899999888763

>PRK07069 short chain dehydrogenase; Validated

Probab=100.00  E-value=6.1e-33  Score=247.03  Aligned_cols=238  Identities=24%  Similarity=0.187  Sum_probs=195.0

Q ss_pred             EEEeCCCChHHHHHHHHHHHCCCEEEEeeCC-hHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCCCcc
Q 019722           38 AIITGATSGIGAETARVLAKRGARLVLPARS-LKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLPLN  116 (336)
Q Consensus        38 ~lItGgs~gIG~aia~~L~~~G~~V~~~~r~-~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id  116 (336)
                      ++||||++|||+++++.|+++|++|++++|+ .+.++...+++........+.++++|+++++++.++++++.+.++++|
T Consensus         2 ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   81 (251)
T PRK07069          2 AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGGLS   81 (251)
T ss_pred             EEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCCcc
Confidence            7999999999999999999999999999998 666666666665443233466789999999999999999999899999


Q ss_pred             EEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccccccccc
Q 019722          117 LLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQIS  194 (336)
Q Consensus       117 ~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~~~~  194 (336)
                      ++|||||.....  .+.+.+++++++++|+.+++.++++++|.|++.+     .++||++||..+..+            
T Consensus        82 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-----~~~ii~~ss~~~~~~------------  144 (251)
T PRK07069         82 VLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQ-----PASIVNISSVAAFKA------------  144 (251)
T ss_pred             EEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcC-----CcEEEEecChhhccC------------
Confidence            999999976543  5567788999999999999999999999998754     479999999877665            


Q ss_pred             CCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccch------hHHHHHHHHHHhhcCCh
Q 019722          195 RNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREG------FITDLVFFLTSKLLKTI  268 (336)
Q Consensus       195 ~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~------~~~~~~~~~~~~~~~~~  268 (336)
                           .+++..|+++|++++.++++++.|+.+.+.+|+|++|+||+++|++......      .........+.....+|
T Consensus       145 -----~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (251)
T PRK07069        145 -----EPDYTAYNASKAAVASLTKSIALDCARRGLDVRCNSIHPTFIRTGIVDPIFQRLGEEEATRKLARGVPLGRLGEP  219 (251)
T ss_pred             -----CCCCchhHHHHHHHHHHHHHHHHHhcccCCcEEEEEEeecccCCcchhHHhhhccchhHHHHHhccCCCCCCcCH
Confidence                 5567789999999999999999999887777999999999999998764211      11111112223445689


Q ss_pred             HHHHHHHHHHHhcCccccCCceeeccCccc
Q 019722          269 PQGAATTCYVAIHPRLVNVSGKYFADCNEA  298 (336)
Q Consensus       269 ~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  298 (336)
                      ++++..+++++. +...+++|+.+..+|+.
T Consensus       220 ~~va~~~~~l~~-~~~~~~~g~~i~~~~g~  248 (251)
T PRK07069        220 DDVAHAVLYLAS-DESRFVTGAELVIDGGI  248 (251)
T ss_pred             HHHHHHHHHHcC-ccccCccCCEEEECCCe
Confidence            999999999876 55678999999888764

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=100.00  E-value=1.1e-32  Score=248.01  Aligned_cols=243  Identities=21%  Similarity=0.193  Sum_probs=184.7

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeC-ChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHH----HHHHHHHHh
Q 019722           36 VTAIITGATSGIGAETARVLAKRGARLVLPAR-SLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSV----RNFVSQFHS  110 (336)
Q Consensus        36 k~~lItGgs~gIG~aia~~L~~~G~~V~~~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v----~~~~~~~~~  110 (336)
                      ++++||||++|||++++++|+++|++|++++| +.+.++...+++.... +.++.++.+|++|++++    +.+++.+.+
T Consensus         2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~   80 (267)
T TIGR02685         2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARR-PNSAVTCQADLSNSATLFSRCEAIIDACFR   80 (267)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhcc-CCceEEEEccCCCchhhHHHHHHHHHHHHH
Confidence            68999999999999999999999999999875 4566776666665432 34677899999999865    555666666


Q ss_pred             cCCCccEEEEcccCCCCC--CCCCc-----------hhhhhHHHHHHhHHHHHHHHHHHHHHHhhcc-CCCCCeEEEEcC
Q 019722          111 LNLPLNLLINNAGKFAHQ--HAISE-----------DGIEMTFATNYLGHFLLTKLLLKKMIETAKA-TGIQGRIVNVSS  176 (336)
Q Consensus       111 ~~~~id~lv~nAg~~~~~--~~~~~-----------~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~-~~~~grIV~vsS  176 (336)
                      .++++|+||||||.....  .+.+.           ++|.+++++|+.+++.+++++.|.|++.... ....++||+++|
T Consensus        81 ~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~~s  160 (267)
T TIGR02685        81 AFGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNLCD  160 (267)
T ss_pred             ccCCceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCCeEEEEehh
Confidence            789999999999975432  12222           2588999999999999999999998654211 112468999999


Q ss_pred             CccccccCCcccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHH
Q 019722          177 SIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDL  256 (336)
Q Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~  256 (336)
                      ..+..+                 .+.+.+|++||+++++|+++++.|+.+.|  |+||+|+||++.|+.... .......
T Consensus       161 ~~~~~~-----------------~~~~~~Y~asK~a~~~~~~~la~e~~~~g--i~v~~v~PG~~~~~~~~~-~~~~~~~  220 (267)
T TIGR02685       161 AMTDQP-----------------LLGFTMYTMAKHALEGLTRSAALELAPLQ--IRVNGVAPGLSLLPDAMP-FEVQEDY  220 (267)
T ss_pred             hhccCC-----------------CcccchhHHHHHHHHHHHHHHHHHHhhhC--eEEEEEecCCccCccccc-hhHHHHH
Confidence            876554                 56677899999999999999999999887  999999999997663211 1111111


Q ss_pred             HHHHHH-hhcCChHHHHHHHHHHHhcCccccCCceeeccCccccc
Q 019722          257 VFFLTS-KLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWT  300 (336)
Q Consensus       257 ~~~~~~-~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~  300 (336)
                      ....+. .+...|++++..++|+++ +...+++|+.+.++|+...
T Consensus       221 ~~~~~~~~~~~~~~~va~~~~~l~~-~~~~~~~G~~~~v~gg~~~  264 (267)
T TIGR02685       221 RRKVPLGQREASAEQIADVVIFLVS-PKAKYITGTCIKVDGGLSL  264 (267)
T ss_pred             HHhCCCCcCCCCHHHHHHHHHHHhC-cccCCcccceEEECCceec
Confidence            111111 245689999999999987 6678999999988887543

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=100.00  E-value=8.2e-33  Score=246.41  Aligned_cols=234  Identities=22%  Similarity=0.236  Sum_probs=194.5

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      .+++++|++|||||+++||++++++|+++|++|++++|+.         +...  +.++.++++|+++++++.++++++.
T Consensus         3 ~~~~~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~---------~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~   71 (252)
T PRK08220          3 AMDFSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF---------LTQE--DYPFATFVLDVSDAAAVAQVCQRLL   71 (252)
T ss_pred             ccCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch---------hhhc--CCceEEEEecCCCHHHHHHHHHHHH
Confidence            4678999999999999999999999999999999999986         1111  4578999999999999999999999


Q ss_pred             hcCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcc
Q 019722          110 SLNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMI  187 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~  187 (336)
                      +.++++|++|||||.....  .+.+.+++++++++|+.+++.+++++.|.|+++.     .++||++||..+..+     
T Consensus        72 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-----~g~iv~~ss~~~~~~-----  141 (252)
T PRK08220         72 AETGPLDVLVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQR-----SGAIVTVGSNAAHVP-----  141 (252)
T ss_pred             HHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-----CCEEEEECCchhccC-----
Confidence            9999999999999976432  5567889999999999999999999999998754     479999999876554     


Q ss_pred             cccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhH-----------HHH
Q 019722          188 RYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFI-----------TDL  256 (336)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~-----------~~~  256 (336)
                                  .++...|+++|++++.+++++++++.+.|  |+||+|+||++.|++........           ...
T Consensus       142 ------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~~--i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~  207 (252)
T PRK08220        142 ------------RIGMAAYGASKAALTSLAKCVGLELAPYG--VRCNVVSPGSTDTDMQRTLWVDEDGEQQVIAGFPEQF  207 (252)
T ss_pred             ------------CCCCchhHHHHHHHHHHHHHHHHHhhHhC--eEEEEEecCcCcchhhhhhccchhhhhhhhhhHHHHH
Confidence                        45667899999999999999999999887  99999999999999865431100           011


Q ss_pred             HHHHHHhhcCChHHHHHHHHHHHhcCccccCCceeeccCcccc
Q 019722          257 VFFLTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAW  299 (336)
Q Consensus       257 ~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  299 (336)
                      ....+......|+|++.++++++. +...+++|+.+..+|+..
T Consensus       208 ~~~~~~~~~~~~~dva~~~~~l~~-~~~~~~~g~~i~~~gg~~  249 (252)
T PRK08220        208 KLGIPLGKIARPQEIANAVLFLAS-DLASHITLQDIVVDGGAT  249 (252)
T ss_pred             hhcCCCcccCCHHHHHHHHHHHhc-chhcCccCcEEEECCCee
Confidence            111123456789999999999987 667899999998888743

>PRK06138 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.7e-32  Score=244.25  Aligned_cols=239  Identities=28%  Similarity=0.263  Sum_probs=198.7

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHh
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHS  110 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  110 (336)
                      |+++||+++||||+++||.+++++|+++|++|++++|+.+..++..+++.   .+.++.++++|++|++++.++++++.+
T Consensus         1 m~~~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~i~~   77 (252)
T PRK06138          1 MRLAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIA---AGGRAFARQGDVGSAEAVEALVDFVAA   77 (252)
T ss_pred             CCCCCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHh---cCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence            46889999999999999999999999999999999999887777766665   256799999999999999999999999


Q ss_pred             cCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccc
Q 019722          111 LNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIR  188 (336)
Q Consensus       111 ~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~  188 (336)
                      .++++|++|||+|.....  .+.+.+++++++++|+.+++.+++.+++.|++++     .++||++||..+..+      
T Consensus        78 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-----~~~ii~~sS~~~~~~------  146 (252)
T PRK06138         78 RWGRLDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQG-----GGSIVNTASQLALAG------  146 (252)
T ss_pred             HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcC-----CeEEEEECChhhccC------
Confidence            899999999999976543  4567889999999999999999999999998764     479999999877665      


Q ss_pred             ccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchh---HHHHHHHH----H
Q 019722          189 YLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGF---ITDLVFFL----T  261 (336)
Q Consensus       189 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~---~~~~~~~~----~  261 (336)
                                 .++...|+.+|++++.+++.++.++...|  |++++|+||++.|++.++....   ........    +
T Consensus       147 -----------~~~~~~Y~~sK~a~~~~~~~l~~~~~~~~--i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~  213 (252)
T PRK06138        147 -----------GRGRAAYVASKGAIASLTRAMALDHATDG--IRVNAVAPGTIDTPYFRRIFARHADPEALREALRARHP  213 (252)
T ss_pred             -----------CCCccHHHHHHHHHHHHHHHHHHHHHhcC--eEEEEEEECCccCcchhhhhccccChHHHHHHHHhcCC
Confidence                       45567899999999999999999998877  9999999999999987653211   01111111    1


Q ss_pred             HhhcCChHHHHHHHHHHHhcCccccCCceeeccCcc
Q 019722          262 SKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNE  297 (336)
Q Consensus       262 ~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~  297 (336)
                      ......+++++..+++++.. ...+.+|+++..+++
T Consensus       214 ~~~~~~~~d~a~~~~~l~~~-~~~~~~g~~~~~~~g  248 (252)
T PRK06138        214 MNRFGTAEEVAQAALFLASD-ESSFATGTTLVVDGG  248 (252)
T ss_pred             CCCCcCHHHHHHHHHHHcCc-hhcCccCCEEEECCC
Confidence            12245789999999998874 457889999988876

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-32  Score=244.49  Aligned_cols=240  Identities=28%  Similarity=0.271  Sum_probs=191.5

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEee-CChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCC
Q 019722           35 SVTAIITGATSGIGAETARVLAKRGARLVLPA-RSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNL  113 (336)
Q Consensus        35 gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~-r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  113 (336)
                      .|++|||||++|||.++++.|+++|++|+++. |+.+.++....+++..  +.++.+++||+++++++.++++++.+.++
T Consensus         2 ~k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   79 (248)
T PRK06947          2 RKVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAA--GGRACVVAGDVANEADVIAMFDAVQSAFG   79 (248)
T ss_pred             CcEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc--CCcEEEEEeccCCHHHHHHHHHHHHHhcC
Confidence            37999999999999999999999999988765 6667666666666543  45799999999999999999999988889


Q ss_pred             CccEEEEcccCCCC---CCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccccc
Q 019722          114 PLNLLINNAGKFAH---QHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYL  190 (336)
Q Consensus       114 ~id~lv~nAg~~~~---~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~  190 (336)
                      ++|++|||||....   ..+.+.++++.++++|+.+++.+++++++.+..++.  +..++||++||.++..+.       
T Consensus        80 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--~~~~~ii~~sS~~~~~~~-------  150 (248)
T PRK06947         80 RLDALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRG--GRGGAIVNVSSIASRLGS-------  150 (248)
T ss_pred             CCCEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCC--CCCcEEEEECchhhcCCC-------
Confidence            99999999997643   245678899999999999999999999999875421  224789999998776542       


Q ss_pred             ccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccc--hhHHHHHHHHHHhhcCCh
Q 019722          191 GQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRERE--GFITDLVFFLTSKLLKTI  268 (336)
Q Consensus       191 ~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~--~~~~~~~~~~~~~~~~~~  268 (336)
                               ...+..|++||++++.++++++.++.+.|  |+|+.|+||+++|++.....  ..........+..+..++
T Consensus       151 ---------~~~~~~Y~~sK~~~~~~~~~la~~~~~~~--i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (248)
T PRK06947        151 ---------PNEYVDYAGSKGAVDTLTLGLAKELGPHG--VRVNAVRPGLIETEIHASGGQPGRAARLGAQTPLGRAGEA  219 (248)
T ss_pred             ---------CCCCcccHhhHHHHHHHHHHHHHHhhhhC--cEEEEEeccCcccccccccCCHHHHHHHhhcCCCCCCcCH
Confidence                     11245799999999999999999998877  99999999999999865321  111111111122335688


Q ss_pred             HHHHHHHHHHHhcCccccCCceeeccCcc
Q 019722          269 PQGAATTCYVAIHPRLVNVSGKYFADCNE  297 (336)
Q Consensus       269 ~~~a~~~~~l~~~~~~~~~~G~~~~~~~~  297 (336)
                      ++++..+++++. ....+++|+++..+|+
T Consensus       220 e~va~~~~~l~~-~~~~~~~G~~~~~~gg  247 (248)
T PRK06947        220 DEVAETIVWLLS-DAASYVTGALLDVGGG  247 (248)
T ss_pred             HHHHHHHHHHcC-ccccCcCCceEeeCCC
Confidence            999999999987 5567899999988774

>PRK05875 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3e-32  Score=246.22  Aligned_cols=244  Identities=20%  Similarity=0.181  Sum_probs=200.1

Q ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhc
Q 019722           32 NLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSL  111 (336)
Q Consensus        32 ~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  111 (336)
                      +|++|++|||||+++||.++++.|+++|++|++++|+.+..+...+++.......++.++++|+++++++..+++++.+.
T Consensus         4 ~~~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   83 (276)
T PRK05875          4 SFQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAW   83 (276)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            47899999999999999999999999999999999998887777776654432357899999999999999999999988


Q ss_pred             CCCccEEEEcccCCCC---CCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccc
Q 019722          112 NLPLNLLINNAGKFAH---QHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIR  188 (336)
Q Consensus       112 ~~~id~lv~nAg~~~~---~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~  188 (336)
                      ++++|++|||||....   ..+.+.+++++++++|+.+++.+++++.+.|.+.+     .++||++||..+..+      
T Consensus        84 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-----~g~iv~~sS~~~~~~------  152 (276)
T PRK05875         84 HGRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGG-----GGSFVGISSIAASNT------  152 (276)
T ss_pred             cCCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-----CcEEEEEechhhcCC------
Confidence            9999999999996532   24567788999999999999999999999997654     479999999876544      


Q ss_pred             ccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhH---HHHHHHHHHhhc
Q 019722          189 YLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFI---TDLVFFLTSKLL  265 (336)
Q Consensus       189 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~---~~~~~~~~~~~~  265 (336)
                                 .+....|+.+|++++.+++++++++...+  |++++|+||+++|++........   .......+....
T Consensus       153 -----------~~~~~~Y~~sK~a~~~~~~~~~~~~~~~~--i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~  219 (276)
T PRK05875        153 -----------HRWFGAYGVTKSAVDHLMKLAADELGPSW--VRVNSIRPGLIRTDLVAPITESPELSADYRACTPLPRV  219 (276)
T ss_pred             -----------CCCCcchHHHHHHHHHHHHHHHHHhcccC--eEEEEEecCccCCccccccccCHHHHHHHHcCCCCCCC
Confidence                       45567899999999999999999999877  99999999999999876532111   111111122344


Q ss_pred             CChHHHHHHHHHHHhcCccccCCceeeccCccccc
Q 019722          266 KTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWT  300 (336)
Q Consensus       266 ~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~  300 (336)
                      ..++|++..+++++.. ...+++|+.+..+++...
T Consensus       220 ~~~~dva~~~~~l~~~-~~~~~~g~~~~~~~g~~~  253 (276)
T PRK05875        220 GEVEDVANLAMFLLSD-AASWITGQVINVDGGHML  253 (276)
T ss_pred             cCHHHHHHHHHHHcCc-hhcCcCCCEEEECCCeec
Confidence            5789999999999874 456789999999887554

>PRK05884 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.2e-33  Score=242.08  Aligned_cols=212  Identities=17%  Similarity=0.142  Sum_probs=174.4

Q ss_pred             EEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCCCcc
Q 019722           37 TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLPLN  116 (336)
Q Consensus        37 ~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id  116 (336)
                      +++||||++|||++++++|+++|++|++++|+.+++++..+++       ++.++++|++++++++++++++.+   ++|
T Consensus         2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~-------~~~~~~~D~~~~~~v~~~~~~~~~---~id   71 (223)
T PRK05884          2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKEL-------DVDAIVCDNTDPASLEEARGLFPH---HLD   71 (223)
T ss_pred             eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc-------cCcEEecCCCCHHHHHHHHHHHhh---cCc
Confidence            4899999999999999999999999999999988776655432       356789999999999999887753   699


Q ss_pred             EEEEcccCCCC---C----CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcccc
Q 019722          117 LLINNAGKFAH---Q----HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRY  189 (336)
Q Consensus       117 ~lv~nAg~~~~---~----~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~  189 (336)
                      ++|||||....   .    ...+.++|++++++|+.+++.++|+++|.|.+       +|+||++||..           
T Consensus        72 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~-------~g~Iv~isS~~-----------  133 (223)
T PRK05884         72 TIVNVPAPSWDAGDPRTYSLADTANAWRNALDATVLSAVLTVQSVGDHLRS-------GGSIISVVPEN-----------  133 (223)
T ss_pred             EEEECCCccccCCCCcccchhcCHHHHHHHHHHHHHHHHHHHHHHHHHhhc-------CCeEEEEecCC-----------
Confidence            99999985211   1    11146789999999999999999999999964       37999999964           


Q ss_pred             cccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHHHHHHHHhhcCChH
Q 019722          190 LGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSKLLKTIP  269 (336)
Q Consensus       190 ~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~  269 (336)
                                .+....|+++|+++.+|+++++.|+.+.|  ||||+|+||+++|++.+...           ......|+
T Consensus       134 ----------~~~~~~Y~asKaal~~~~~~la~e~~~~g--I~v~~v~PG~v~t~~~~~~~-----------~~p~~~~~  190 (223)
T PRK05884        134 ----------PPAGSAEAAIKAALSNWTAGQAAVFGTRG--ITINAVACGRSVQPGYDGLS-----------RTPPPVAA  190 (223)
T ss_pred             ----------CCCccccHHHHHHHHHHHHHHHHHhhhcC--eEEEEEecCccCchhhhhcc-----------CCCCCCHH
Confidence                      12235799999999999999999999888  99999999999998743211           01124789


Q ss_pred             HHHHHHHHHHhcCccccCCceeeccCccccc
Q 019722          270 QGAATTCYVAIHPRLVNVSGKYFADCNEAWT  300 (336)
Q Consensus       270 ~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~  300 (336)
                      |++..++|+++ +.+.+++|+.+..+|+...
T Consensus       191 ~ia~~~~~l~s-~~~~~v~G~~i~vdgg~~~  220 (223)
T PRK05884        191 EIARLALFLTT-PAARHITGQTLHVSHGALA  220 (223)
T ss_pred             HHHHHHHHHcC-chhhccCCcEEEeCCCeec
Confidence            99999999977 7778999999999887544

>PRK06057 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-32  Score=246.19  Aligned_cols=237  Identities=23%  Similarity=0.248  Sum_probs=192.4

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHh
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHS  110 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  110 (336)
                      ..|+||+++||||++|||.+++++|+++|++|++++|+....++..+++       ...++++|++++++++++++++.+
T Consensus         3 ~~~~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~-------~~~~~~~D~~~~~~~~~~~~~~~~   75 (255)
T PRK06057          3 QRLAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEV-------GGLFVPTDVTDEDAVNALFDTAAE   75 (255)
T ss_pred             ccCCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc-------CCcEEEeeCCCHHHHHHHHHHHHH
Confidence            3478999999999999999999999999999999999987766555443       125789999999999999999988


Q ss_pred             cCCCccEEEEcccCCCCC----CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCc
Q 019722          111 LNLPLNLLINNAGKFAHQ----HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDM  186 (336)
Q Consensus       111 ~~~~id~lv~nAg~~~~~----~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~  186 (336)
                      .++++|++|||||.....    .+.+.+++++.+++|+.+++.+++.++|.|++++     .++||++||..+..+.   
T Consensus        76 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-----~g~iv~~sS~~~~~g~---  147 (255)
T PRK06057         76 TYGSVDIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQG-----KGSIINTASFVAVMGS---  147 (255)
T ss_pred             HcCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhC-----CcEEEEEcchhhccCC---
Confidence            889999999999975432    3456788999999999999999999999998764     4799999998766541   


Q ss_pred             ccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHH----HHHHHHHH
Q 019722          187 IRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFIT----DLVFFLTS  262 (336)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~----~~~~~~~~  262 (336)
                                   .++...|+.+|++++.+++.++.++.++|  |+|++|+||+++|++.........    +.....+.
T Consensus       148 -------------~~~~~~Y~~sKaal~~~~~~l~~~~~~~g--i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~  212 (255)
T PRK06057        148 -------------ATSQISYTASKGGVLAMSRELGVQFARQG--IRVNALCPGPVNTPLLQELFAKDPERAARRLVHVPM  212 (255)
T ss_pred             -------------CCCCcchHHHHHHHHHHHHHHHHHHHhhC--cEEEEEeeCCcCCchhhhhccCCHHHHHHHHhcCCC
Confidence                         12456799999999999999999999887  999999999999998765321111    11111222


Q ss_pred             hhcCChHHHHHHHHHHHhcCccccCCceeeccCccc
Q 019722          263 KLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEA  298 (336)
Q Consensus       263 ~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  298 (336)
                      .....|++++..+.+++. +...+++|+.+..+++.
T Consensus       213 ~~~~~~~~~a~~~~~l~~-~~~~~~~g~~~~~~~g~  247 (255)
T PRK06057        213 GRFAEPEEIAAAVAFLAS-DDASFITASTFLVDGGI  247 (255)
T ss_pred             CCCcCHHHHHHHHHHHhC-ccccCccCcEEEECCCe
Confidence            345789999999999887 55788999998888763

>PRK12744 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-32  Score=246.40  Aligned_cols=237  Identities=22%  Similarity=0.248  Sum_probs=186.1

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCC----hHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHH
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARS----LKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVS  106 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~----~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~  106 (336)
                      +++++|+++||||++|||+++++.|+++|++|+++.++    .+..++..++++..  +.++.++++|+++++++.++++
T Consensus         4 ~~l~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~   81 (257)
T PRK12744          4 HSLKGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAA--GAKAVAFQADLTTAAAVEKLFD   81 (257)
T ss_pred             CCCCCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHh--CCcEEEEecCcCCHHHHHHHHH
Confidence            45789999999999999999999999999997776543    34455555555443  4578999999999999999999


Q ss_pred             HHHhcCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEE-cCCcccccc
Q 019722          107 QFHSLNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNV-SSSIHSWFS  183 (336)
Q Consensus       107 ~~~~~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~v-sS~~~~~~~  183 (336)
                      ++.+.++++|++|||||.....  .+.+.+++++++++|+.+++.+++++.|.|.+       .++++++ ||..+..  
T Consensus        82 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~-------~~~iv~~~ss~~~~~--  152 (257)
T PRK12744         82 DAKAAFGRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLND-------NGKIVTLVTSLLGAF--  152 (257)
T ss_pred             HHHHhhCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhcc-------CCCEEEEecchhccc--
Confidence            9998889999999999975432  45677899999999999999999999999864       2577776 4543322  


Q ss_pred             CCcccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhH--H--HHHH-
Q 019722          184 GDMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFI--T--DLVF-  258 (336)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~--~--~~~~-  258 (336)
                                      .+.+..|++||++++.|+++++.|+.+.|  |+||+|+||++.|++........  .  .... 
T Consensus       153 ----------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~~--i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~  214 (257)
T PRK12744        153 ----------------TPFYSAYAGSKAPVEHFTRAASKEFGARG--ISVTAVGPGPMDTPFFYPQEGAEAVAYHKTAAA  214 (257)
T ss_pred             ----------------CCCcccchhhHHHHHHHHHHHHHHhCcCc--eEEEEEecCccccchhccccccchhhccccccc
Confidence                            34456799999999999999999999877  99999999999999764421110  0  0000 


Q ss_pred             --HHHHhhcCChHHHHHHHHHHHhcCccccCCceeeccCccc
Q 019722          259 --FLTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEA  298 (336)
Q Consensus       259 --~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  298 (336)
                        .....+...++|++..++|++. + ..+++|+.+..+++.
T Consensus       215 ~~~~~~~~~~~~~dva~~~~~l~~-~-~~~~~g~~~~~~gg~  254 (257)
T PRK12744        215 LSPFSKTGLTDIEDIVPFIRFLVT-D-GWWITGQTILINGGY  254 (257)
T ss_pred             ccccccCCCCCHHHHHHHHHHhhc-c-cceeecceEeecCCc
Confidence              1111145679999999999987 4 468899999888764

>PRK06198 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.3e-32  Score=244.77  Aligned_cols=244  Identities=25%  Similarity=0.248  Sum_probs=199.4

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCE-EEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGAR-LVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~~-V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      ..+++|+++||||+++||++++++|+++|++ |++++|+.+......+++...  +.++.++.+|+++++++.++++.+.
T Consensus         2 ~~~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~   79 (260)
T PRK06198          2 GRLDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEAL--GAKAVFVQADLSDVEDCRRVVAAAD   79 (260)
T ss_pred             CCCCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhc--CCeEEEEEccCCCHHHHHHHHHHHH
Confidence            3588999999999999999999999999998 999999988777766666443  5678899999999999999999998


Q ss_pred             hcCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcc
Q 019722          110 SLNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMI  187 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~  187 (336)
                      +.++++|++|||||.....  .+.+.+.++.++++|+.+++.+++++++.|.++..    .+++|++||..+..+     
T Consensus        80 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~----~g~iv~~ss~~~~~~-----  150 (260)
T PRK06198         80 EAFGRLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKA----EGTIVNIGSMSAHGG-----  150 (260)
T ss_pred             HHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC----CCEEEEECCcccccC-----
Confidence            8889999999999976533  45678899999999999999999999999976531    379999999876544     


Q ss_pred             cccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccch----hHHHHHH----H
Q 019722          188 RYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREG----FITDLVF----F  259 (336)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~----~~~~~~~----~  259 (336)
                                  .+....|+.+|+++++++++++.++...+  |+|++|+||++.|++......    .......    .
T Consensus       151 ------------~~~~~~Y~~sK~a~~~~~~~~a~e~~~~~--i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~  216 (260)
T PRK06198        151 ------------QPFLAAYCASKGALATLTRNAAYALLRNR--IRVNGLNIGWMATEGEDRIQREFHGAPDDWLEKAAAT  216 (260)
T ss_pred             ------------CCCcchhHHHHHHHHHHHHHHHHHhcccC--eEEEEEeeccccCcchhhhhhhccCCChHHHHHHhcc
Confidence                        45567899999999999999999999887  999999999999997532111    0011111    1


Q ss_pred             HHHhhcCChHHHHHHHHHHHhcCccccCCceeeccCccccc
Q 019722          260 LTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWT  300 (336)
Q Consensus       260 ~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~  300 (336)
                      .+.....++++++..+++++. +...+++|+++..+++.+-
T Consensus       217 ~~~~~~~~~~~~a~~~~~l~~-~~~~~~~G~~~~~~~~~~~  256 (260)
T PRK06198        217 QPFGRLLDPDEVARAVAFLLS-DESGLMTGSVIDFDQSVWG  256 (260)
T ss_pred             CCccCCcCHHHHHHHHHHHcC-hhhCCccCceEeECCcccc
Confidence            112334678999999999987 5567899999999987653

>PRK09134 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.8e-32  Score=242.08  Aligned_cols=241  Identities=24%  Similarity=0.234  Sum_probs=191.7

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeC-ChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPAR-SLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQF  108 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~  108 (336)
                      +++..+|++|||||++|||++++++|+++|++|+++.+ +.+..+.+.++++..  +.++.++++|++|.+++.++++++
T Consensus         4 ~~~~~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~~~~~~~~~   81 (258)
T PRK09134          4 MSMAAPRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRAL--GRRAVALQADLADEAEVRALVARA   81 (258)
T ss_pred             CcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc--CCeEEEEEcCCCCHHHHHHHHHHH
Confidence            45678999999999999999999999999999988765 455566666666544  567899999999999999999999


Q ss_pred             HhcCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCc
Q 019722          109 HSLNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDM  186 (336)
Q Consensus       109 ~~~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~  186 (336)
                      .+.++++|++|||||.....  .+.+.+++++++++|+.+++.+++++.+.+.+..     .++||+++|..+..+    
T Consensus        82 ~~~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-----~~~iv~~~s~~~~~~----  152 (258)
T PRK09134         82 SAALGPITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADA-----RGLVVNMIDQRVWNL----  152 (258)
T ss_pred             HHHcCCCCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-----CceEEEECchhhcCC----
Confidence            88889999999999976542  5667889999999999999999999999997653     479999988654433    


Q ss_pred             ccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHHHHHHHHhhcC
Q 019722          187 IRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSKLLK  266 (336)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~  266 (336)
                                   .+.+..|++||++++.+++++++++.+ +  |+||+|+||++.|+..... ..+.......+.....
T Consensus       153 -------------~p~~~~Y~~sK~a~~~~~~~la~~~~~-~--i~v~~i~PG~v~t~~~~~~-~~~~~~~~~~~~~~~~  215 (258)
T PRK09134        153 -------------NPDFLSYTLSKAALWTATRTLAQALAP-R--IRVNAIGPGPTLPSGRQSP-EDFARQHAATPLGRGS  215 (258)
T ss_pred             -------------CCCchHHHHHHHHHHHHHHHHHHHhcC-C--cEEEEeecccccCCcccCh-HHHHHHHhcCCCCCCc
Confidence                         345568999999999999999999865 3  9999999999998753321 1122222222223456


Q ss_pred             ChHHHHHHHHHHHhcCccccCCceeeccCcccccc
Q 019722          267 TIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWTS  301 (336)
Q Consensus       267 ~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~~  301 (336)
                      ++++.+.++++++.+   .+++|+.+..+++....
T Consensus       216 ~~~d~a~~~~~~~~~---~~~~g~~~~i~gg~~~~  247 (258)
T PRK09134        216 TPEEIAAAVRYLLDA---PSVTGQMIAVDGGQHLA  247 (258)
T ss_pred             CHHHHHHHHHHHhcC---CCcCCCEEEECCCeecc
Confidence            799999999999974   35799998888865433

>PRK08263 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.7e-32  Score=245.66  Aligned_cols=235  Identities=21%  Similarity=0.227  Sum_probs=191.3

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcC
Q 019722           33 LSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLN  112 (336)
Q Consensus        33 l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  112 (336)
                      |.+|++|||||++|||++++++|+++|++|++++|+.+.+++..+.+     +.++.++++|+++++++..+++.+.+.+
T Consensus         1 ~~~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~~   75 (275)
T PRK08263          1 MMEKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKY-----GDRLLPLALDVTDRAAVFAAVETAVEHF   75 (275)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc-----cCCeeEEEccCCCHHHHHHHHHHHHHHc
Confidence            35789999999999999999999999999999999988766554432     3468889999999999999999998888


Q ss_pred             CCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccccc
Q 019722          113 LPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYL  190 (336)
Q Consensus       113 ~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~  190 (336)
                      +++|++|||||.....  .+.+.+++++++++|+.+++.++++++|.|++++     .++||++||..+..+        
T Consensus        76 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-----~~~iv~vsS~~~~~~--------  142 (275)
T PRK08263         76 GRLDIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQR-----SGHIIQISSIGGISA--------  142 (275)
T ss_pred             CCCCEEEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-----CCEEEEEcChhhcCC--------
Confidence            9999999999976543  5667889999999999999999999999998764     479999999877665        


Q ss_pred             ccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccc------hhHHH----HHHHH
Q 019722          191 GQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRERE------GFITD----LVFFL  260 (336)
Q Consensus       191 ~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~------~~~~~----~~~~~  260 (336)
                               .+....|+.+|++++.+++.++.++.+.|  |+|+.|+||++.|++.....      .....    .....
T Consensus       143 ---------~~~~~~Y~~sKaa~~~~~~~la~e~~~~g--i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  211 (275)
T PRK08263        143 ---------FPMSGIYHASKWALEGMSEALAQEVAEFG--IKVTLVEPGGYSTDWAGTSAKRATPLDAYDTLREELAEQW  211 (275)
T ss_pred             ---------CCCccHHHHHHHHHHHHHHHHHHHhhhhC--cEEEEEecCCccCCccccccccCCCchhhhhHHHHHHHHH
Confidence                     55567899999999999999999999877  99999999999999874211      11111    11222


Q ss_pred             HHhhc-CChHHHHHHHHHHHhcCccccCCceeeccCcccc
Q 019722          261 TSKLL-KTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAW  299 (336)
Q Consensus       261 ~~~~~-~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  299 (336)
                      ..... ..|+++++.+++++..+.   ..++++...+...
T Consensus       212 ~~~~~~~~p~dva~~~~~l~~~~~---~~~~~~~~~~~~~  248 (275)
T PRK08263        212 SERSVDGDPEAAAEALLKLVDAEN---PPLRLFLGSGVLD  248 (275)
T ss_pred             HhccCCCCHHHHHHHHHHHHcCCC---CCeEEEeCchHHH
Confidence            33344 789999999999998543   3577776555433

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=100.00  E-value=3.7e-32  Score=243.51  Aligned_cols=242  Identities=24%  Similarity=0.276  Sum_probs=198.5

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      +.+++||++|||||+++||++++++|+++|++|++++|+++..++..+.++..  +.++.++++|+++.++++.+++++.
T Consensus         2 ~~~~~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~   79 (262)
T PRK13394          2 MSNLNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKA--GGKAIGVAMDVTNEDAVNAGIDKVA   79 (262)
T ss_pred             cccCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhc--CceEEEEECCCCCHHHHHHHHHHHH
Confidence            34588999999999999999999999999999999999998888888877654  5678999999999999999999998


Q ss_pred             hcCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHH-HHhhccCCCCCeEEEEcCCccccccCCc
Q 019722          110 SLNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKM-IETAKATGIQGRIVNVSSSIHSWFSGDM  186 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l-~~~~~~~~~~grIV~vsS~~~~~~~~~~  186 (336)
                      +.++++|++|||||.....  .+.+.+++++.+++|+.+++.+++++++.+ ++.+     .++||++||..+..+    
T Consensus        80 ~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~-----~~~iv~~ss~~~~~~----  150 (262)
T PRK13394         80 ERFGSVDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDR-----GGVVIYMGSVHSHEA----  150 (262)
T ss_pred             HHcCCCCEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcC-----CcEEEEEcchhhcCC----
Confidence            8889999999999976433  456778899999999999999999999999 5443     479999999766544    


Q ss_pred             ccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchh--------HHHHHH
Q 019722          187 IRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGF--------ITDLVF  258 (336)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~--------~~~~~~  258 (336)
                                   .+....|+.+|++++.+++.++.++.+.+  |++|+|+||++.|++.+.....        .+....
T Consensus       151 -------------~~~~~~y~~sk~a~~~~~~~la~~~~~~~--i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~  215 (262)
T PRK13394        151 -------------SPLKSAYVTAKHGLLGLARVLAKEGAKHN--VRSHVVCPGFVRTPLVDKQIPEQAKELGISEEEVVK  215 (262)
T ss_pred             -------------CCCCcccHHHHHHHHHHHHHHHHHhhhcC--eEEEEEeeCcccchhhhhhhHhhhhccCCChHHHHH
Confidence                         44566899999999999999999998777  9999999999999975432110        111111


Q ss_pred             HH-----HHhhcCChHHHHHHHHHHHhcCccccCCceeeccCccc
Q 019722          259 FL-----TSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEA  298 (336)
Q Consensus       259 ~~-----~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  298 (336)
                      .+     .......++|++.++++++..+ ...++|++|..+++.
T Consensus       216 ~~~~~~~~~~~~~~~~dva~a~~~l~~~~-~~~~~g~~~~~~~g~  259 (262)
T PRK13394        216 KVMLGKTVDGVFTTVEDVAQTVLFLSSFP-SAALTGQSFVVSHGW  259 (262)
T ss_pred             HHHhcCCCCCCCCCHHHHHHHHHHHcCcc-ccCCcCCEEeeCCce
Confidence            11     1134568899999999998743 467899999888764

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=6.3e-33  Score=228.33  Aligned_cols=184  Identities=31%  Similarity=0.339  Sum_probs=167.9

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHh
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHS  110 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  110 (336)
                      |+++|.|+|||||++|||+++|++|.+.|-.|++++|+++++++..++      ...++...||+.|.++++++++++.+
T Consensus         1 mk~tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~------~p~~~t~v~Dv~d~~~~~~lvewLkk   74 (245)
T COG3967           1 MKTTGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAE------NPEIHTEVCDVADRDSRRELVEWLKK   74 (245)
T ss_pred             CcccCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhc------CcchheeeecccchhhHHHHHHHHHh
Confidence            568999999999999999999999999999999999999998887765      45789999999999999999999999


Q ss_pred             cCCCccEEEEcccCCCCC----CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCc
Q 019722          111 LNLPLNLLINNAGKFAHQ----HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDM  186 (336)
Q Consensus       111 ~~~~id~lv~nAg~~~~~----~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~  186 (336)
                      .++.+++||||||+....    .+...++.++.+++|+.+++.|++.++|++.+++     .+.||+|||..+..+    
T Consensus        75 ~~P~lNvliNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~-----~a~IInVSSGLafvP----  145 (245)
T COG3967          75 EYPNLNVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQP-----EATIINVSSGLAFVP----  145 (245)
T ss_pred             hCCchheeeecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCC-----CceEEEeccccccCc----
Confidence            999999999999987653    3345567788999999999999999999999986     489999999988876    


Q ss_pred             ccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCC
Q 019722          187 IRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTR  244 (336)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~  244 (336)
                                   ....+.|+++|+|++.++.+|+..++..+  |.|.-+.|-.|+|+
T Consensus       146 -------------m~~~PvYcaTKAaiHsyt~aLR~Qlk~t~--veVIE~~PP~V~t~  188 (245)
T COG3967         146 -------------MASTPVYCATKAAIHSYTLALREQLKDTS--VEVIELAPPLVDTT  188 (245)
T ss_pred             -------------ccccccchhhHHHHHHHHHHHHHHhhhcc--eEEEEecCCceecC
Confidence                         66778899999999999999999999887  99999999999997

>PRK07825 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.2e-32  Score=246.86  Aligned_cols=215  Identities=28%  Similarity=0.305  Sum_probs=185.6

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHh
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHS  110 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  110 (336)
                      ++++++++|||||++|||++++++|+++|++|++++|+++.+++..+++.      ++.++.+|+++++++.++++++.+
T Consensus         1 ~~~~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~------~~~~~~~D~~~~~~~~~~~~~~~~   74 (273)
T PRK07825          1 DDLRGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELG------LVVGGPLDVTDPASFAAFLDAVEA   74 (273)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc------cceEEEccCCCHHHHHHHHHHHHH
Confidence            46889999999999999999999999999999999999988776665542      578899999999999999999999


Q ss_pred             cCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccc
Q 019722          111 LNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIR  188 (336)
Q Consensus       111 ~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~  188 (336)
                      .++++|++|||||+....  .+.+.+.+++++++|+.+++.+++.++|.|.+++     .++||++||.++..+      
T Consensus        75 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-----~g~iv~isS~~~~~~------  143 (273)
T PRK07825         75 DLGPIDVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRG-----RGHVVNVASLAGKIP------  143 (273)
T ss_pred             HcCCCCEEEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-----CCEEEEEcCccccCC------
Confidence            889999999999976543  4567788999999999999999999999998865     489999999987765      


Q ss_pred             ccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHHHHHHHHhhcCCh
Q 019722          189 YLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSKLLKTI  268 (336)
Q Consensus       189 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~  268 (336)
                                 .++...|++||++++.++++++.++.+.|  |++++|+||++.|++......        .......++
T Consensus       144 -----------~~~~~~Y~asKaa~~~~~~~l~~el~~~g--i~v~~v~Pg~v~t~~~~~~~~--------~~~~~~~~~  202 (273)
T PRK07825        144 -----------VPGMATYCASKHAVVGFTDAARLELRGTG--VHVSVVLPSFVNTELIAGTGG--------AKGFKNVEP  202 (273)
T ss_pred             -----------CCCCcchHHHHHHHHHHHHHHHHHhhccC--cEEEEEeCCcCcchhhccccc--------ccCCCCCCH
Confidence                       56677899999999999999999999877  999999999999998765321        011235688


Q ss_pred             HHHHHHHHHHHhcCc
Q 019722          269 PQGAATTCYVAIHPR  283 (336)
Q Consensus       269 ~~~a~~~~~l~~~~~  283 (336)
                      +++|..++.++.++.
T Consensus       203 ~~va~~~~~~l~~~~  217 (273)
T PRK07825        203 EDVAAAIVGTVAKPR  217 (273)
T ss_pred             HHHHHHHHHHHhCCC
Confidence            999999999998554

>PRK06123 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.1e-32  Score=242.10  Aligned_cols=239  Identities=26%  Similarity=0.292  Sum_probs=190.7

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEee-CChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCC
Q 019722           35 SVTAIITGATSGIGAETARVLAKRGARLVLPA-RSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNL  113 (336)
Q Consensus        35 gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~-r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  113 (336)
                      +|++|||||+++||.+++++|+++|++|+++. |+++..++..+.+...  +.++.++++|+++.+++.++++++.+.++
T Consensus         2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   79 (248)
T PRK06123          2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQ--GGEALAVAADVADEADVLRLFEAVDRELG   79 (248)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhC--CCcEEEEEeccCCHHHHHHHHHHHHHHhC
Confidence            58999999999999999999999999998887 5555566665666543  45788999999999999999999999899


Q ss_pred             CccEEEEcccCCCC---CCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccccc
Q 019722          114 PLNLLINNAGKFAH---QHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYL  190 (336)
Q Consensus       114 ~id~lv~nAg~~~~---~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~  190 (336)
                      ++|++|||||....   ..+.+.++|++++++|+.+++.+++++++.|.++..  +.+|+||++||..+..+        
T Consensus        80 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--~~~g~iv~~sS~~~~~~--------  149 (248)
T PRK06123         80 RLDALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHG--GRGGAIVNVSSMAARLG--------  149 (248)
T ss_pred             CCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC--CCCeEEEEECchhhcCC--------
Confidence            99999999997643   245677899999999999999999999999976421  11378999999877665        


Q ss_pred             ccccCCCCCCCh-hhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccc--hhHHHHHHHHHHhhcCC
Q 019722          191 GQISRNKSHYDA-TRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRERE--GFITDLVFFLTSKLLKT  267 (336)
Q Consensus       191 ~~~~~~~~~~~~-~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~--~~~~~~~~~~~~~~~~~  267 (336)
                               .+. +..|+++|++++.+++.++.++.+.|  |+|++|+||.+.|++.....  ..........+..+...
T Consensus       150 ---------~~~~~~~Y~~sKaa~~~~~~~la~~~~~~~--i~v~~i~pg~v~~~~~~~~~~~~~~~~~~~~~p~~~~~~  218 (248)
T PRK06123        150 ---------SPGEYIDYAASKGAIDTMTIGLAKEVAAEG--IRVNAVRPGVIYTEIHASGGEPGRVDRVKAGIPMGRGGT  218 (248)
T ss_pred             ---------CCCCccchHHHHHHHHHHHHHHHHHhcccC--eEEEEEecCcccCchhhccCCHHHHHHHHhcCCCCCCcC
Confidence                     222 34699999999999999999998877  99999999999999754321  11111111223334468


Q ss_pred             hHHHHHHHHHHHhcCccccCCceeeccCcc
Q 019722          268 IPQGAATTCYVAIHPRLVNVSGKYFADCNE  297 (336)
Q Consensus       268 ~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~  297 (336)
                      +++++.++++++. +...+++|+.+..+|+
T Consensus       219 ~~d~a~~~~~l~~-~~~~~~~g~~~~~~gg  247 (248)
T PRK06123        219 AEEVARAILWLLS-DEASYTTGTFIDVSGG  247 (248)
T ss_pred             HHHHHHHHHHHhC-ccccCccCCEEeecCC
Confidence            9999999999887 4557889999988764

>PLN02780 ketoreductase/ oxidoreductase

Probab=100.00  E-value=1.3e-32  Score=253.47  Aligned_cols=214  Identities=24%  Similarity=0.277  Sum_probs=174.8

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCC--HHHHHHHHHHHHh
Q 019722           33 LSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSS--LSSVRNFVSQFHS  110 (336)
Q Consensus        33 l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~~  110 (336)
                      ..|++++||||++|||+++|++|+++|++|++++|+++++++..++++..+++.++..+.+|+++  .+.++.+.+.+..
T Consensus        51 ~~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~~~~  130 (320)
T PLN02780         51 KYGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETIEG  130 (320)
T ss_pred             ccCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHHhcC
Confidence            46899999999999999999999999999999999999999998888876655688999999985  3334444443321


Q ss_pred             cCCCccEEEEcccCCCC----CCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCc
Q 019722          111 LNLPLNLLINNAGKFAH----QHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDM  186 (336)
Q Consensus       111 ~~~~id~lv~nAg~~~~----~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~  186 (336)
                        ..+|++|||||+...    ..+.+.+++++++++|+.|++.++++++|.|.+++     .|+||++||.++...+.  
T Consensus       131 --~didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-----~g~IV~iSS~a~~~~~~--  201 (320)
T PLN02780        131 --LDVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRK-----KGAIINIGSGAAIVIPS--  201 (320)
T ss_pred             --CCccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcC-----CcEEEEEechhhccCCC--
Confidence              247799999997642    25678889999999999999999999999998765     58999999987754210  


Q ss_pred             ccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHHHHHHHHhhcC
Q 019722          187 IRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSKLLK  266 (336)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~  266 (336)
                                   .+....|++||+++++++++++.|+.+.|  |+|++|+||+|+|++......          .....
T Consensus       202 -------------~p~~~~Y~aSKaal~~~~~~L~~El~~~g--I~V~~v~PG~v~T~~~~~~~~----------~~~~~  256 (320)
T PLN02780        202 -------------DPLYAVYAATKAYIDQFSRCLYVEYKKSG--IDVQCQVPLYVATKMASIRRS----------SFLVP  256 (320)
T ss_pred             -------------CccchHHHHHHHHHHHHHHHHHHHHhccC--eEEEEEeeCceecCcccccCC----------CCCCC
Confidence                         35677899999999999999999999887  999999999999998763110          11135


Q ss_pred             ChHHHHHHHHHHHh
Q 019722          267 TIPQGAATTCYVAI  280 (336)
Q Consensus       267 ~~~~~a~~~~~l~~  280 (336)
                      +|++.|+.++..+.
T Consensus       257 ~p~~~A~~~~~~~~  270 (320)
T PLN02780        257 SSDGYARAALRWVG  270 (320)
T ss_pred             CHHHHHHHHHHHhC
Confidence            78889999998885

>PRK06182 short chain dehydrogenase; Validated

Probab=100.00  E-value=3.6e-32  Score=245.45  Aligned_cols=217  Identities=25%  Similarity=0.289  Sum_probs=178.9

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcC
Q 019722           33 LSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLN  112 (336)
Q Consensus        33 l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  112 (336)
                      +++|+++||||++|||++++++|+++|++|++++|+.+++++..        ..++.++++|+++++++..+++++.+.+
T Consensus         1 ~~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~--------~~~~~~~~~Dv~~~~~~~~~~~~~~~~~   72 (273)
T PRK06182          1 MQKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLA--------SLGVHPLSLDVTDEASIKAAVDTIIAEE   72 (273)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH--------hCCCeEEEeeCCCHHHHHHHHHHHHHhc
Confidence            36799999999999999999999999999999999987665432        1258889999999999999999999989


Q ss_pred             CCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccccc
Q 019722          113 LPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYL  190 (336)
Q Consensus       113 ~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~  190 (336)
                      +++|++|||||+....  .+.+.++++.++++|+.+++.+++.++|.|++.+     .|+||++||..+..+        
T Consensus        73 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~-----~g~iv~isS~~~~~~--------  139 (273)
T PRK06182         73 GRIDVLVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQR-----SGRIINISSMGGKIY--------  139 (273)
T ss_pred             CCCCEEEECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcC-----CCEEEEEcchhhcCC--------
Confidence            9999999999976443  5667889999999999999999999999998765     479999999876544        


Q ss_pred             ccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccc---------hhHHH------
Q 019722          191 GQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRERE---------GFITD------  255 (336)
Q Consensus       191 ~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~---------~~~~~------  255 (336)
                               .+....|+++|+++++++++++.|+.+.|  |+|++|+||+++|++.....         .....      
T Consensus       140 ---------~~~~~~Y~~sKaa~~~~~~~l~~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  208 (273)
T PRK06182        140 ---------TPLGAWYHATKFALEGFSDALRLEVAPFG--IDVVVIEPGGIKTEWGDIAADHLLKTSGNGAYAEQAQAVA  208 (273)
T ss_pred             ---------CCCccHhHHHHHHHHHHHHHHHHHhcccC--CEEEEEecCCcccccchhhhhhhcccccccchHHHHHHHH
Confidence                     34455799999999999999999999877  99999999999999864211         00111      


Q ss_pred             --HHHHHHHhhcCChHHHHHHHHHHHhc
Q 019722          256 --LVFFLTSKLLKTIPQGAATTCYVAIH  281 (336)
Q Consensus       256 --~~~~~~~~~~~~~~~~a~~~~~l~~~  281 (336)
                        ...........+|+++|..+++++..
T Consensus       209 ~~~~~~~~~~~~~~~~~vA~~i~~~~~~  236 (273)
T PRK06182        209 ASMRSTYGSGRLSDPSVIADAISKAVTA  236 (273)
T ss_pred             HHHHHhhccccCCCHHHHHHHHHHHHhC
Confidence              11111233557899999999999874

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=6.4e-32  Score=240.50  Aligned_cols=239  Identities=25%  Similarity=0.273  Sum_probs=196.4

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHh
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHS  110 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  110 (336)
                      |+++|++++||||++|||.++++.|+++|++|++++|+..+.++..++++..  +.++.++++|++++++++++++.+.+
T Consensus         1 ~~~~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   78 (253)
T PRK08217          1 MDLKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGAL--GTEVRGYAANVTDEEDVEATFAQIAE   78 (253)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            3588999999999999999999999999999999999998888777777654  56889999999999999999999988


Q ss_pred             cCCCccEEEEcccCCCCC-----------CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCcc
Q 019722          111 LNLPLNLLINNAGKFAHQ-----------HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIH  179 (336)
Q Consensus       111 ~~~~id~lv~nAg~~~~~-----------~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~  179 (336)
                      .++++|++|||||.....           .+.+.+.++.++++|+.+++.+++.+.|.|.+...    .++||++||.. 
T Consensus        79 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~----~~~iv~~ss~~-  153 (253)
T PRK08217         79 DFGQLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGS----KGVIINISSIA-  153 (253)
T ss_pred             HcCCCCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCC----CeEEEEEcccc-
Confidence            888999999999965421           34566888999999999999999999999986532    47899998863 


Q ss_pred             ccccCCcccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhH-HHHHH
Q 019722          180 SWFSGDMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFI-TDLVF  258 (336)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~-~~~~~  258 (336)
                      ..+                 .++...|+++|++++.++++++.++.+.+  |++++++||.+.|++.+...... .....
T Consensus       154 ~~~-----------------~~~~~~Y~~sK~a~~~l~~~la~~~~~~~--i~v~~v~pg~v~t~~~~~~~~~~~~~~~~  214 (253)
T PRK08217        154 RAG-----------------NMGQTNYSASKAGVAAMTVTWAKELARYG--IRVAAIAPGVIETEMTAAMKPEALERLEK  214 (253)
T ss_pred             ccC-----------------CCCCchhHHHHHHHHHHHHHHHHHHHHcC--cEEEEEeeCCCcCccccccCHHHHHHHHh
Confidence            333                 44567899999999999999999998877  99999999999999876643221 11112


Q ss_pred             HHHHhhcCChHHHHHHHHHHHhcCccccCCceeeccCccc
Q 019722          259 FLTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEA  298 (336)
Q Consensus       259 ~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  298 (336)
                      ..+......+++.+..+.+++.+   .+++|+.+..+|+.
T Consensus       215 ~~~~~~~~~~~~~a~~~~~l~~~---~~~~g~~~~~~gg~  251 (253)
T PRK08217        215 MIPVGRLGEPEEIAHTVRFIIEN---DYVTGRVLEIDGGL  251 (253)
T ss_pred             cCCcCCCcCHHHHHHHHHHHHcC---CCcCCcEEEeCCCc
Confidence            22333456899999999999852   46799999988864

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1.2e-32  Score=242.95  Aligned_cols=226  Identities=26%  Similarity=0.250  Sum_probs=182.7

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHh
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHS  110 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  110 (336)
                      |+++||+++||||++|||++++++|+++|++|++++|+....      .     ..++.++.+|++++      ++++.+
T Consensus         1 ~~l~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~------~-----~~~~~~~~~D~~~~------~~~~~~   63 (235)
T PRK06550          1 QEFMTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPD------L-----SGNFHFLQLDLSDD------LEPLFD   63 (235)
T ss_pred             CCCCCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCcccc------c-----CCcEEEEECChHHH------HHHHHH
Confidence            468999999999999999999999999999999999985421      0     34688999999887      444444


Q ss_pred             cCCCccEEEEcccCCCC---CCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcc
Q 019722          111 LNLPLNLLINNAGKFAH---QHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMI  187 (336)
Q Consensus       111 ~~~~id~lv~nAg~~~~---~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~  187 (336)
                      .++++|++|||||....   ..+.+.+++++++++|+.+++.++++++|.+.+++     .++||++||..+..+     
T Consensus        64 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-----~~~iv~~sS~~~~~~-----  133 (235)
T PRK06550         64 WVPSVDILCNTAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERK-----SGIIINMCSIASFVA-----  133 (235)
T ss_pred             hhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-----CcEEEEEcChhhccC-----
Confidence            56789999999997532   25667889999999999999999999999998764     489999999887665     


Q ss_pred             cccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccch--hH-HHHHHHHHHhh
Q 019722          188 RYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREG--FI-TDLVFFLTSKL  264 (336)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~--~~-~~~~~~~~~~~  264 (336)
                                  .++...|+.+|++++.+++.++.++.+.|  |+||+|+||+++|++......  .. .......+..+
T Consensus       134 ------------~~~~~~Y~~sK~a~~~~~~~la~~~~~~g--i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~  199 (235)
T PRK06550        134 ------------GGGGAAYTASKHALAGFTKQLALDYAKDG--IQVFGIAPGAVKTPMTAADFEPGGLADWVARETPIKR  199 (235)
T ss_pred             ------------CCCCcccHHHHHHHHHHHHHHHHHhhhcC--eEEEEEeeCCccCcccccccCchHHHHHHhccCCcCC
Confidence                        45567899999999999999999998877  999999999999998653211  11 11111223344


Q ss_pred             cCChHHHHHHHHHHHhcCccccCCceeeccCccc
Q 019722          265 LKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEA  298 (336)
Q Consensus       265 ~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  298 (336)
                      ...+++++..++|+++ +...+++|+.+..+|+.
T Consensus       200 ~~~~~~~a~~~~~l~s-~~~~~~~g~~~~~~gg~  232 (235)
T PRK06550        200 WAEPEEVAELTLFLAS-GKADYMQGTIVPIDGGW  232 (235)
T ss_pred             CCCHHHHHHHHHHHcC-hhhccCCCcEEEECCce
Confidence            5789999999999986 66688999999888864

>PRK06194 hypothetical protein; Provisional

Probab=100.00  E-value=9.7e-32  Score=244.27  Aligned_cols=231  Identities=25%  Similarity=0.220  Sum_probs=188.0

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHh
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHS  110 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  110 (336)
                      .++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++...  +.++.++++|++|.+++.++++.+.+
T Consensus         2 ~~~~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~d~~~~~~~~~~~~~   79 (287)
T PRK06194          2 KDFAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQ--GAEVLGVRTDVSDAAQVEALADAALE   79 (287)
T ss_pred             cCCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHH
Confidence            4678999999999999999999999999999999999988888777777654  45789999999999999999999999


Q ss_pred             cCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhcc-CCCCCeEEEEcCCccccccCCcc
Q 019722          111 LNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKA-TGIQGRIVNVSSSIHSWFSGDMI  187 (336)
Q Consensus       111 ~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~-~~~~grIV~vsS~~~~~~~~~~~  187 (336)
                      .++++|+||||||.....  .+.+.++|+.++++|+.+++.++++++|.|.++... ....++||++||.++..+     
T Consensus        80 ~~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~-----  154 (287)
T PRK06194         80 RFGAVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLLA-----  154 (287)
T ss_pred             HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccC-----
Confidence            999999999999986543  456788999999999999999999999999876421 011279999999887765     


Q ss_pred             cccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccch----------------
Q 019722          188 RYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREG----------------  251 (336)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~----------------  251 (336)
                                  .+....|+++|++++.++++++.++...+.+||++.++||++.|++.+....                
T Consensus       155 ------------~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~irv~~v~pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~  222 (287)
T PRK06194        155 ------------PPAMGIYNVSKHAVVSLTETLYQDLSLVTDQVGASVLCPYFVPTGIWQSERNRPADLANTAPPTRSQL  222 (287)
T ss_pred             ------------CCCCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEEeCcccCccccccccCchhcccCccccchhh
Confidence                        4556789999999999999999999865556999999999999998754311                


Q ss_pred             hHHHHHHHHHHhhcCChHHHHHHHHHHHh
Q 019722          252 FITDLVFFLTSKLLKTIPQGAATTCYVAI  280 (336)
Q Consensus       252 ~~~~~~~~~~~~~~~~~~~~a~~~~~l~~  280 (336)
                      ...............+++++|..++..+.
T Consensus       223 ~~~~~~~~~~~~~~~s~~dva~~i~~~~~  251 (287)
T PRK06194        223 IAQAMSQKAVGSGKVTAEEVAQLVFDAIR  251 (287)
T ss_pred             HHHHHHHhhhhccCCCHHHHHHHHHHHHH
Confidence            00111111111223588999999998774

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=100.00  E-value=9e-32  Score=238.51  Aligned_cols=237  Identities=24%  Similarity=0.277  Sum_probs=192.6

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChH-HHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCCC
Q 019722           36 VTAIITGATSGIGAETARVLAKRGARLVLPARSLK-AAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLP  114 (336)
Q Consensus        36 k~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~-~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  114 (336)
                      |+++||||+++||+++++.|+++|++|++++|+.. ...+....+..  .+.++.++++|+++++++..+++++.+.+++
T Consensus         3 k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~   80 (245)
T PRK12824          3 KIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGF--TEDQVRLKELDVTDTEECAEALAEIEEEEGP   80 (245)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhhc--cCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            68999999999999999999999999999999854 22222222222  1457899999999999999999999998999


Q ss_pred             ccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccccccc
Q 019722          115 LNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQ  192 (336)
Q Consensus       115 id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~~  192 (336)
                      +|++|||||.....  .+.+.++|++++++|+.+++.+++.++|.+++.+     .++||++||..+..+          
T Consensus        81 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-----~~~iv~iss~~~~~~----------  145 (245)
T PRK12824         81 VDILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQG-----YGRIINISSVNGLKG----------  145 (245)
T ss_pred             CCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhC-----CeEEEEECChhhccC----------
Confidence            99999999976432  5667899999999999999999999999998754     579999999877654          


Q ss_pred             ccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHH-HHHHHHHhhcCChHHH
Q 019722          193 ISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITD-LVFFLTSKLLKTIPQG  271 (336)
Q Consensus       193 ~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~-~~~~~~~~~~~~~~~~  271 (336)
                             .++...|+.+|++++++++.++.++.+.+  |++++|+||++.|++.+........ .....+......++++
T Consensus       146 -------~~~~~~Y~~sK~a~~~~~~~l~~~~~~~~--i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  216 (245)
T PRK12824        146 -------QFGQTNYSAAKAGMIGFTKALASEGARYG--ITVNCIAPGYIATPMVEQMGPEVLQSIVNQIPMKRLGTPEEI  216 (245)
T ss_pred             -------CCCChHHHHHHHHHHHHHHHHHHHHHHhC--eEEEEEEEcccCCcchhhcCHHHHHHHHhcCCCCCCCCHHHH
Confidence                   55677899999999999999999998877  9999999999999987654322111 1112223345688999


Q ss_pred             HHHHHHHHhcCccccCCceeeccCcccc
Q 019722          272 AATTCYVAIHPRLVNVSGKYFADCNEAW  299 (336)
Q Consensus       272 a~~~~~l~~~~~~~~~~G~~~~~~~~~~  299 (336)
                      +..+++++. +...+++|+.+..+++..
T Consensus       217 a~~~~~l~~-~~~~~~~G~~~~~~~g~~  243 (245)
T PRK12824        217 AAAVAFLVS-EAAGFITGETISINGGLY  243 (245)
T ss_pred             HHHHHHHcC-ccccCccCcEEEECCCee
Confidence            999988886 556788999999888753

>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]

Probab=100.00  E-value=8.4e-32  Score=225.30  Aligned_cols=229  Identities=27%  Similarity=0.307  Sum_probs=184.3

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHCC-CE-EEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhc--
Q 019722           36 VTAIITGATSGIGAETARVLAKRG-AR-LVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSL--  111 (336)
Q Consensus        36 k~~lItGgs~gIG~aia~~L~~~G-~~-V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~--  111 (336)
                      |.++||||++|||+.++++|++.. .. ++.+.|+++++.+..+.....  +.++++++.|+++.++++.+++++.+.  
T Consensus         4 ksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a~~~l~~k~~~--d~rvHii~Ldvt~deS~~~~~~~V~~iVg   81 (249)
T KOG1611|consen    4 KSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKAATELALKSKS--DSRVHIIQLDVTCDESIDNFVQEVEKIVG   81 (249)
T ss_pred             ccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHhhHHHHHhhcc--CCceEEEEEecccHHHHHHHHHHHHhhcc
Confidence            669999999999999999999764 44 445668888863333332222  679999999999999999999999886  


Q ss_pred             CCCccEEEEcccCCCCC---CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccC------CCCCeEEEEcCCccccc
Q 019722          112 NLPLNLLINNAGKFAHQ---HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKAT------GIQGRIVNVSSSIHSWF  182 (336)
Q Consensus       112 ~~~id~lv~nAg~~~~~---~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~------~~~grIV~vsS~~~~~~  182 (336)
                      ..++|+||+|||+...-   .+.+.+.|.+++++|..|+++++|+|+|++++.+...      -..+.|||+||.++..+
T Consensus        82 ~~GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~raaIinisS~~~s~~  161 (249)
T KOG1611|consen   82 SDGLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLSVSRAAIINISSSAGSIG  161 (249)
T ss_pred             cCCceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCcccccceeEEEeeccccccC
Confidence            67899999999987653   4556678999999999999999999999999875321      11358999999887754


Q ss_pred             cCCcccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHHHHHHHH
Q 019722          183 SGDMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTS  262 (336)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~  262 (336)
                      ..              ...++.+|.+||+|++.|+|+++.++++.+  |.|..+|||||.|+|....             
T Consensus       162 ~~--------------~~~~~~AYrmSKaAlN~f~ksls~dL~~~~--ilv~sihPGwV~TDMgg~~-------------  212 (249)
T KOG1611|consen  162 GF--------------RPGGLSAYRMSKAALNMFAKSLSVDLKDDH--ILVVSIHPGWVQTDMGGKK-------------  212 (249)
T ss_pred             CC--------------CCcchhhhHhhHHHHHHHHHHhhhhhcCCc--EEEEEecCCeEEcCCCCCC-------------
Confidence            21              145678999999999999999999999888  9999999999999998852             


Q ss_pred             hhcCChHHHHHHHHHHHhcCccccCCceeeccCcc
Q 019722          263 KLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNE  297 (336)
Q Consensus       263 ~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~  297 (336)
                       ...++|+.+..++.... ..-...+|.||+.++.
T Consensus       213 -a~ltveeSts~l~~~i~-kL~~~hnG~ffn~dlt  245 (249)
T KOG1611|consen  213 -AALTVEESTSKLLASIN-KLKNEHNGGFFNRDGT  245 (249)
T ss_pred             -cccchhhhHHHHHHHHH-hcCcccCcceEccCCC
Confidence             24577888888887765 3344568999987764

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=100.00  E-value=1.2e-31  Score=237.25  Aligned_cols=236  Identities=25%  Similarity=0.261  Sum_probs=194.2

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeC-ChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCCC
Q 019722           36 VTAIITGATSGIGAETARVLAKRGARLVLPAR-SLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLP  114 (336)
Q Consensus        36 k~~lItGgs~gIG~aia~~L~~~G~~V~~~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  114 (336)
                      |++|||||++|||++++++|+++|++|+++.| ++...++..+++...  +.++.++.+|++++.++.++++++.+.+++
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   78 (242)
T TIGR01829         1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGAL--GFDFRVVEGDVSSFESCKAAVAKVEAELGP   78 (242)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhh--CCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            78999999999999999999999999999988 666555555554433  467999999999999999999999988899


Q ss_pred             ccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccccccc
Q 019722          115 LNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQ  192 (336)
Q Consensus       115 id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~~  192 (336)
                      +|++|||||.....  .+.+.+++++.+++|+.+++.++++++|.|++.+     .++||++||..+..+          
T Consensus        79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-----~~~iv~iss~~~~~~----------  143 (242)
T TIGR01829        79 IDVLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERG-----WGRIINISSVNGQKG----------  143 (242)
T ss_pred             CcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-----CcEEEEEcchhhcCC----------
Confidence            99999999976542  4567788999999999999999999999998754     479999999876654          


Q ss_pred             ccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchh-HHHHHHHHHHhhcCChHHH
Q 019722          193 ISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGF-ITDLVFFLTSKLLKTIPQG  271 (336)
Q Consensus       193 ~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~-~~~~~~~~~~~~~~~~~~~  271 (336)
                             .+++..|+++|++++.++++++.++.+.+  |++++++||++.|++.+..... ........+......|++.
T Consensus       144 -------~~~~~~y~~sk~a~~~~~~~la~~~~~~~--i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  214 (242)
T TIGR01829       144 -------QFGQTNYSAAKAGMIGFTKALAQEGATKG--VTVNTISPGYIATDMVMAMREDVLNSIVAQIPVGRLGRPEEI  214 (242)
T ss_pred             -------CCCcchhHHHHHHHHHHHHHHHHHhhhhC--eEEEEEeeCCCcCccccccchHHHHHHHhcCCCCCCcCHHHH
Confidence                   45567899999999999999999998877  9999999999999987654322 2122222233455788999


Q ss_pred             HHHHHHHHhcCccccCCceeeccCccc
Q 019722          272 AATTCYVAIHPRLVNVSGKYFADCNEA  298 (336)
Q Consensus       272 a~~~~~l~~~~~~~~~~G~~~~~~~~~  298 (336)
                      +..+.+++. +...+++|+.+..+|+.
T Consensus       215 a~~~~~l~~-~~~~~~~G~~~~~~gg~  240 (242)
T TIGR01829       215 AAAVAFLAS-EEAGYITGATLSINGGL  240 (242)
T ss_pred             HHHHHHHcC-chhcCccCCEEEecCCc
Confidence            999988876 45568899999988874

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PRK05855 short chain dehydrogenase; Validated

Probab=100.00  E-value=6.3e-32  Score=268.29  Aligned_cols=228  Identities=24%  Similarity=0.239  Sum_probs=191.9

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      ...+.++++|||||++|||++++++|+++|++|++++|+.++++++.+.++..  +.++.++++|+++++++.++++++.
T Consensus       310 ~~~~~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~~~~~~~~~~  387 (582)
T PRK05855        310 RGPFSGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAA--GAVAHAYRVDVSDADAMEAFAEWVR  387 (582)
T ss_pred             cccCCCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEEcCCCCHHHHHHHHHHHH
Confidence            34578899999999999999999999999999999999998888888877654  4579999999999999999999999


Q ss_pred             hcCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcc
Q 019722          110 SLNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMI  187 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~  187 (336)
                      +.++++|+||||||+....  .+.+.+++++++++|+.|++.++++++|.|.+++.    +|+||++||.++..+     
T Consensus       388 ~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~----~g~iv~~sS~~~~~~-----  458 (582)
T PRK05855        388 AEHGVPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGT----GGHIVNVASAAAYAP-----  458 (582)
T ss_pred             HhcCCCcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC----CcEEEEECChhhccC-----
Confidence            9899999999999986543  56788999999999999999999999999987532    479999999987665     


Q ss_pred             cccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccc--hh----HH---HHHH
Q 019722          188 RYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRERE--GF----IT---DLVF  258 (336)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~--~~----~~---~~~~  258 (336)
                                  .++...|++||+++++++++++.|+.+.|  |+|++|+||+|+|++.+...  ..    ..   ....
T Consensus       459 ------------~~~~~~Y~~sKaa~~~~~~~l~~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~  524 (582)
T PRK05855        459 ------------SRSLPAYATSKAAVLMLSECLRAELAAAG--IGVTAICPGFVDTNIVATTRFAGADAEDEARRRGRAD  524 (582)
T ss_pred             ------------CCCCcHHHHHHHHHHHHHHHHHHHhcccC--cEEEEEEeCCCcccchhccccCCcccchhhhHHhhhh
Confidence                        56677899999999999999999999887  99999999999999877542  10    00   1111


Q ss_pred             HHHHhhcCChHHHHHHHHHHHhcC
Q 019722          259 FLTSKLLKTIPQGAATTCYVAIHP  282 (336)
Q Consensus       259 ~~~~~~~~~~~~~a~~~~~l~~~~  282 (336)
                      ........+|+++|..+++.+..+
T Consensus       525 ~~~~~~~~~p~~va~~~~~~~~~~  548 (582)
T PRK05855        525 KLYQRRGYGPEKVAKAIVDAVKRN  548 (582)
T ss_pred             hhccccCCCHHHHHHHHHHHHHcC
Confidence            111223358999999999999844

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=100.00  E-value=7.9e-32  Score=270.20  Aligned_cols=246  Identities=22%  Similarity=0.223  Sum_probs=201.0

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      ..+|+||++|||||++|||++++++|+++|++|++++|+.+.++...+++.......++.++++|+++++++.++++++.
T Consensus       409 ~~~l~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~  488 (676)
T TIGR02632       409 EKTLARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVA  488 (676)
T ss_pred             CcCCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHH
Confidence            45689999999999999999999999999999999999998888777777654434578899999999999999999999


Q ss_pred             hcCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcc
Q 019722          110 SLNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMI  187 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~  187 (336)
                      +.++++|++|||||.....  .+.+.++|+..+++|+.+++.+++.+++.|+++..    +++||++||..+..+     
T Consensus       489 ~~~g~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~----~g~IV~iSS~~a~~~-----  559 (676)
T TIGR02632       489 LAYGGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGL----GGNIVFIASKNAVYA-----  559 (676)
T ss_pred             HhcCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC----CCEEEEEeChhhcCC-----
Confidence            9999999999999975432  56678899999999999999999999999987532    479999999877665     


Q ss_pred             cccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeC--CCCCccch---------hHHH-
Q 019722          188 RYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRT--RLTREREG---------FITD-  255 (336)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T--~~~~~~~~---------~~~~-  255 (336)
                                  .++...|++||++++.++++++.++++.|  |+||+|+||.|.+  .++.....         ...+ 
T Consensus       560 ------------~~~~~aY~aSKaA~~~l~r~lA~el~~~g--IrVn~V~Pg~V~~~s~~~~~~~~~~~~~~~~~~~~~~  625 (676)
T TIGR02632       560 ------------GKNASAYSAAKAAEAHLARCLAAEGGTYG--IRVNTVNPDAVLQGSGIWDGEWREERAAAYGIPADEL  625 (676)
T ss_pred             ------------CCCCHHHHHHHHHHHHHHHHHHHHhcccC--eEEEEEECCceecCcccccccchhhhhhcccCChHHH
Confidence                        55678999999999999999999999887  9999999999964  33321100         0011 


Q ss_pred             ---HHHHHHHhhcCChHHHHHHHHHHHhcCccccCCceeeccCcccc
Q 019722          256 ---LVFFLTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAW  299 (336)
Q Consensus       256 ---~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  299 (336)
                         .....+......++|++.+++++++ +...++||+++.++|+..
T Consensus       626 ~~~~~~r~~l~r~v~peDVA~av~~L~s-~~~~~~TG~~i~vDGG~~  671 (676)
T TIGR02632       626 EEHYAKRTLLKRHIFPADIAEAVFFLAS-SKSEKTTGCIITVDGGVP  671 (676)
T ss_pred             HHHHHhcCCcCCCcCHHHHHHHHHHHhC-CcccCCcCcEEEECCCch
Confidence               1111122344678999999999986 456789999999988754

>PRK05866 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.4e-31  Score=242.43  Aligned_cols=219  Identities=25%  Similarity=0.278  Sum_probs=183.3

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      .++++||+++||||++|||+++|++|+++|++|++++|+.+.+++..+++...  +.++.++++|++|++++.++++++.
T Consensus        35 ~~~~~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~--~~~~~~~~~Dl~d~~~v~~~~~~~~  112 (293)
T PRK05866         35 PVDLTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRA--GGDAMAVPCDLSDLDAVDALVADVE  112 (293)
T ss_pred             CcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHH
Confidence            67789999999999999999999999999999999999998888887777654  4578899999999999999999999


Q ss_pred             hcCCCccEEEEcccCCCCC--CC--CCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCC
Q 019722          110 SLNLPLNLLINNAGKFAHQ--HA--ISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGD  185 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~~~--~~--~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~  185 (336)
                      +.++++|++|||||.....  .+  .+.++++.++++|+.|++.++++++|.|.+.+     .++||++||.++....  
T Consensus       113 ~~~g~id~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-----~g~iv~isS~~~~~~~--  185 (293)
T PRK05866        113 KRIGGVDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERG-----DGHIINVATWGVLSEA--  185 (293)
T ss_pred             HHcCCCCEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-----CcEEEEECChhhcCCC--
Confidence            9899999999999976443  11  13467889999999999999999999998765     4899999996543210  


Q ss_pred             cccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHHHHHHHHhhc
Q 019722          186 MIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSKLL  265 (336)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~  265 (336)
                                    .+....|+++|+++++++++++.|+.+.|  |+|++|+||+++|++.......        .....
T Consensus       186 --------------~p~~~~Y~asKaal~~l~~~la~e~~~~g--I~v~~v~pg~v~T~~~~~~~~~--------~~~~~  241 (293)
T PRK05866        186 --------------SPLFSVYNASKAALSAVSRVIETEWGDRG--VHSTTLYYPLVATPMIAPTKAY--------DGLPA  241 (293)
T ss_pred             --------------CCCcchHHHHHHHHHHHHHHHHHHhcccC--cEEEEEEcCcccCccccccccc--------cCCCC
Confidence                          34566899999999999999999999877  9999999999999997642110        01124


Q ss_pred             CChHHHHHHHHHHHhc
Q 019722          266 KTIPQGAATTCYVAIH  281 (336)
Q Consensus       266 ~~~~~~a~~~~~l~~~  281 (336)
                      .+|+++|..++..+..
T Consensus       242 ~~pe~vA~~~~~~~~~  257 (293)
T PRK05866        242 LTADEAAEWMVTAART  257 (293)
T ss_pred             CCHHHHHHHHHHHHhc
Confidence            5889999998888864

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1.2e-31  Score=239.58  Aligned_cols=245  Identities=22%  Similarity=0.260  Sum_probs=195.3

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCCh-HHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCC
Q 019722           35 SVTAIITGATSGIGAETARVLAKRGARLVLPARSL-KAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNL  113 (336)
Q Consensus        35 gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~-~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  113 (336)
                      .|+++||||+++||.+++++|+++|++|++++|+. ...++..+.++..  +.++.++++|+++++++.++++++.+.++
T Consensus         2 ~k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   79 (256)
T PRK12745          2 RPVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRAL--GVEVIFFPADVADLSAHEAMLDAAQAAWG   79 (256)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHHHHhcC
Confidence            48999999999999999999999999999999864 3444555555433  45799999999999999999999999889


Q ss_pred             CccEEEEcccCCCC----CCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccC-CCCCeEEEEcCCccccccCCccc
Q 019722          114 PLNLLINNAGKFAH----QHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKAT-GIQGRIVNVSSSIHSWFSGDMIR  188 (336)
Q Consensus       114 ~id~lv~nAg~~~~----~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~-~~~grIV~vsS~~~~~~~~~~~~  188 (336)
                      ++|++|||||....    ..+.+.+++++++++|+.+++.+++++.+.|.++.... ...+++|++||..+..+      
T Consensus        80 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~------  153 (256)
T PRK12745         80 RIDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIMV------  153 (256)
T ss_pred             CCCEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhccC------
Confidence            99999999997532    24567789999999999999999999999998754211 11367999999887665      


Q ss_pred             ccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHHHHH--HHHhhcC
Q 019722          189 YLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFF--LTSKLLK  266 (336)
Q Consensus       189 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~--~~~~~~~  266 (336)
                                 .+....|+.+|++++.++++++.++.+.|  |+|++|+||++.|++..............  .+.....
T Consensus       154 -----------~~~~~~Y~~sK~a~~~~~~~l~~~~~~~g--i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~  220 (256)
T PRK12745        154 -----------SPNRGEYCISKAGLSMAAQLFAARLAEEG--IGVYEVRPGLIKTDMTAPVTAKYDALIAKGLVPMPRWG  220 (256)
T ss_pred             -----------CCCCcccHHHHHHHHHHHHHHHHHHHHhC--CEEEEEecCCCcCccccccchhHHhhhhhcCCCcCCCc
Confidence                       45566899999999999999999998877  99999999999999876532222211111  1222355


Q ss_pred             ChHHHHHHHHHHHhcCccccCCceeeccCcccccc
Q 019722          267 TIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWTS  301 (336)
Q Consensus       267 ~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~~  301 (336)
                      .+++++..+.+++. +...+++|+.+..+|+...+
T Consensus       221 ~~~d~a~~i~~l~~-~~~~~~~G~~~~i~gg~~~~  254 (256)
T PRK12745        221 EPEDVARAVAALAS-GDLPYSTGQAIHVDGGLSIP  254 (256)
T ss_pred             CHHHHHHHHHHHhC-CcccccCCCEEEECCCeecc
Confidence            78999999988876 66678899999999876543

>PRK07454 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-31  Score=237.67  Aligned_cols=228  Identities=28%  Similarity=0.239  Sum_probs=189.4

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCC
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNL  113 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  113 (336)
                      ++|+++||||+++||++++++|+++|++|++++|++++.++..+.+...  +.++.++++|+++++++.++++++.+.++
T Consensus         5 ~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   82 (241)
T PRK07454          5 SMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRST--GVKAAAYSIDLSNPEAIAPGIAELLEQFG   82 (241)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhC--CCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            4689999999999999999999999999999999998877777766543  46789999999999999999999999999


Q ss_pred             CccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcccccc
Q 019722          114 PLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLG  191 (336)
Q Consensus       114 ~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~  191 (336)
                      ++|++|||||.....  .+.+.+++++++++|+.+++.+++++++.|.+++     .++||++||..+..+         
T Consensus        83 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-----~~~iv~isS~~~~~~---------  148 (241)
T PRK07454         83 CPDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARG-----GGLIINVSSIAARNA---------  148 (241)
T ss_pred             CCCEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcC-----CcEEEEEccHHhCcC---------
Confidence            999999999976432  4567788999999999999999999999998764     489999999876544         


Q ss_pred             cccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHHHHHHHHhhcCChHHH
Q 019722          192 QISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSKLLKTIPQG  271 (336)
Q Consensus       192 ~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~  271 (336)
                              .+.+..|+.+|++++.++++++.++.+.|  |++++|+||++.|++..... ..    .........+++++
T Consensus       149 --------~~~~~~Y~~sK~~~~~~~~~~a~e~~~~g--i~v~~i~pg~i~t~~~~~~~-~~----~~~~~~~~~~~~~v  213 (241)
T PRK07454        149 --------FPQWGAYCVSKAALAAFTKCLAEEERSHG--IRVCTITLGAVNTPLWDTET-VQ----ADFDRSAMLSPEQV  213 (241)
T ss_pred             --------CCCccHHHHHHHHHHHHHHHHHHHhhhhC--CEEEEEecCcccCCcccccc-cc----cccccccCCCHHHH
Confidence                    55667899999999999999999998877  99999999999999865311 00    01112345689999


Q ss_pred             HHHHHHHHhcCccccCCceee
Q 019722          272 AATTCYVAIHPRLVNVSGKYF  292 (336)
Q Consensus       272 a~~~~~l~~~~~~~~~~G~~~  292 (336)
                      |..+++++..+....+.+..+
T Consensus       214 a~~~~~l~~~~~~~~~~~~~~  234 (241)
T PRK07454        214 AQTILHLAQLPPSAVIEDLTL  234 (241)
T ss_pred             HHHHHHHHcCCccceeeeEEe
Confidence            999999998675544444333

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1.9e-31  Score=236.56  Aligned_cols=240  Identities=28%  Similarity=0.303  Sum_probs=200.1

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEe-eCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGARLVLP-ARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~-~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      +++.+|++|||||+++||.++++.|+++|++|+++ +|+.+..++..+.+...  +.++.++++|+++++++.++++++.
T Consensus         1 ~~~~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~   78 (247)
T PRK05565          1 MKLMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEE--GGDAIAVKADVSSEEDVENLVEQIV   78 (247)
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHH
Confidence            35788999999999999999999999999999998 99988877777766553  4578999999999999999999998


Q ss_pred             hcCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcc
Q 019722          110 SLNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMI  187 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~  187 (336)
                      +.++++|++|||+|.....  .+.+.+++++.+++|+.+++.+++.+.+.+.+++     .+++|++||..+..+     
T Consensus        79 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-----~~~~v~~sS~~~~~~-----  148 (247)
T PRK05565         79 EKFGKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRK-----SGVIVNISSIWGLIG-----  148 (247)
T ss_pred             HHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-----CcEEEEECCHhhccC-----
Confidence            8889999999999976432  4567889999999999999999999999998764     479999999877665     


Q ss_pred             cccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHHH-HHHHHhhcC
Q 019722          188 RYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLV-FFLTSKLLK  266 (336)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~-~~~~~~~~~  266 (336)
                                  .+....|+.+|++++.++++++.++...|  |++++|+||+++|++.+.......... ...+.....
T Consensus       149 ------------~~~~~~y~~sK~a~~~~~~~~~~~~~~~g--i~~~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~  214 (247)
T PRK05565        149 ------------ASCEVLYSASKGAVNAFTKALAKELAPSG--IRVNAVAPGAIDTEMWSSFSEEDKEGLAEEIPLGRLG  214 (247)
T ss_pred             ------------CCCccHHHHHHHHHHHHHHHHHHHHHHcC--eEEEEEEECCccCccccccChHHHHHHHhcCCCCCCC
Confidence                        45566899999999999999999998877  999999999999998776542211111 112223345


Q ss_pred             ChHHHHHHHHHHHhcCccccCCceeeccCcc
Q 019722          267 TIPQGAATTCYVAIHPRLVNVSGKYFADCNE  297 (336)
Q Consensus       267 ~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~  297 (336)
                      .+++++..++++++ +....++|+++..+++
T Consensus       215 ~~~~va~~~~~l~~-~~~~~~~g~~~~~~~~  244 (247)
T PRK05565        215 KPEEIAKVVLFLAS-DDASYITGQIITVDGG  244 (247)
T ss_pred             CHHHHHHHHHHHcC-CccCCccCcEEEecCC
Confidence            78999999999988 4567889999988876

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-31  Score=239.17  Aligned_cols=239  Identities=26%  Similarity=0.267  Sum_probs=198.4

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcC
Q 019722           33 LSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLN  112 (336)
Q Consensus        33 l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  112 (336)
                      +++|++|||||+++||++++++|+++|++|++++|++++.++...+++..  +.+++++.+|+++++++..+++++.+.+
T Consensus         2 ~~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   79 (258)
T PRK12429          2 LKGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKA--GGKAIGVAMDVTDEEAINAGIDYAVETF   79 (258)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            67899999999999999999999999999999999998888877777653  5689999999999999999999999888


Q ss_pred             CCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccccc
Q 019722          113 LPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYL  190 (336)
Q Consensus       113 ~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~  190 (336)
                      +++|++|||||.....  .+.+.++++..+++|+.+++.+++.+++.|++.+     .++||++||..+..+        
T Consensus        80 ~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-----~~~iv~iss~~~~~~--------  146 (258)
T PRK12429         80 GGVDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQG-----GGRIINMASVHGLVG--------  146 (258)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcC-----CeEEEEEcchhhccC--------
Confidence            9999999999975443  4567788999999999999999999999998765     479999999877665        


Q ss_pred             ccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccch--------hHHHHHH-H--
Q 019722          191 GQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREG--------FITDLVF-F--  259 (336)
Q Consensus       191 ~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~--------~~~~~~~-~--  259 (336)
                               .++...|+++|++++.+++.++.++.+.+  |++++++||++.|++......        ....... .  
T Consensus       147 ---------~~~~~~y~~~k~a~~~~~~~l~~~~~~~~--i~v~~~~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (258)
T PRK12429        147 ---------SAGKAAYVSAKHGLIGLTKVVALEGATHG--VTVNAICPGYVDTPLVRKQIPDLAKERGISEEEVLEDVLL  215 (258)
T ss_pred             ---------CCCcchhHHHHHHHHHHHHHHHHHhcccC--eEEEEEecCCCcchhhhhhhhhhccccCCChHHHHHHHHh
Confidence                     56677899999999999999999998877  999999999999988653211        0011111 1  


Q ss_pred             --HHHhhcCChHHHHHHHHHHHhcCccccCCceeeccCccc
Q 019722          260 --LTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEA  298 (336)
Q Consensus       260 --~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  298 (336)
                        .......+++|++.++++++. +....++|+.+..+++.
T Consensus       216 ~~~~~~~~~~~~d~a~~~~~l~~-~~~~~~~g~~~~~~~g~  255 (258)
T PRK12429        216 PLVPQKRFTTVEEIADYALFLAS-FAAKGVTGQAWVVDGGW  255 (258)
T ss_pred             ccCCccccCCHHHHHHHHHHHcC-ccccCccCCeEEeCCCE
Confidence              112345678999999999987 44456789999888763

>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]

Probab=100.00  E-value=8.2e-32  Score=236.63  Aligned_cols=188  Identities=28%  Similarity=0.359  Sum_probs=169.2

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHh
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHS  110 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  110 (336)
                      .+..+|.|+|||+.+|+|+.+|++|.++|++|+..+.+++.++.+..+..    ..+...++.|++++++|+++.+.+.+
T Consensus        25 ~~~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~----s~rl~t~~LDVT~~esi~~a~~~V~~  100 (322)
T KOG1610|consen   25 DSLSDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETK----SPRLRTLQLDVTKPESVKEAAQWVKK  100 (322)
T ss_pred             cccCCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhc----CCcceeEeeccCCHHHHHHHHHHHHH
Confidence            45678999999999999999999999999999999988777766655543    46899999999999999999999887


Q ss_pred             cC--CCccEEEEcccCCCC---CCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCC
Q 019722          111 LN--LPLNLLINNAGKFAH---QHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGD  185 (336)
Q Consensus       111 ~~--~~id~lv~nAg~~~~---~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~  185 (336)
                      ..  .++..||||||+...   .+-.+.+++++++++|+.|++.++|.++|.+++++      |||||+||..|..+   
T Consensus       101 ~l~~~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~ar------GRvVnvsS~~GR~~---  171 (322)
T KOG1610|consen  101 HLGEDGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRAR------GRVVNVSSVLGRVA---  171 (322)
T ss_pred             hcccccceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhcc------CeEEEecccccCcc---
Confidence            53  469999999996543   36678899999999999999999999999999985      99999999999876   


Q ss_pred             cccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCC
Q 019722          186 MIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTR  247 (336)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~  247 (336)
                                    .|...+|++||+|++.++.++++|+.+.|  |.|..|.||...|++..
T Consensus       172 --------------~p~~g~Y~~SK~aVeaf~D~lR~EL~~fG--V~VsiiePG~f~T~l~~  217 (322)
T KOG1610|consen  172 --------------LPALGPYCVSKFAVEAFSDSLRRELRPFG--VKVSIIEPGFFKTNLAN  217 (322)
T ss_pred             --------------CcccccchhhHHHHHHHHHHHHHHHHhcC--cEEEEeccCccccccCC
Confidence                          67788899999999999999999999999  99999999999999987

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=2.3e-31  Score=236.65  Aligned_cols=230  Identities=24%  Similarity=0.284  Sum_probs=192.9

Q ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCC--CHHHHHHHHHHHH
Q 019722           32 NLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLS--SLSSVRNFVSQFH  109 (336)
Q Consensus        32 ~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~--~~~~v~~~~~~~~  109 (336)
                      .+++|+++||||+++||.+++++|+++|++|++++|+.+++++..+++.... ..++.++.+|++  +++++..+++.+.
T Consensus         9 ~~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~d~~~~~~~~~~~~~~~~~   87 (247)
T PRK08945          9 LLKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAG-GPQPAIIPLDLLTATPQNYQQLADTIE   87 (247)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcC-CCCceEEEecccCCCHHHHHHHHHHHH
Confidence            3689999999999999999999999999999999999988888777776542 346777888886  7899999999999


Q ss_pred             hcCCCccEEEEcccCCCC---CCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCc
Q 019722          110 SLNLPLNLLINNAGKFAH---QHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDM  186 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~~---~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~  186 (336)
                      +.++++|+||||||....   ..+.+.+++++.+++|+.+.+.++++++|.|.+++     .++||++||..+..+    
T Consensus        88 ~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~-----~~~iv~~ss~~~~~~----  158 (247)
T PRK08945         88 EQFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSP-----AASLVFTSSSVGRQG----  158 (247)
T ss_pred             HHhCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCC-----CCEEEEEccHhhcCC----
Confidence            888999999999997543   24667789999999999999999999999998765     479999999877655    


Q ss_pred             ccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHHHHHHHHhhcC
Q 019722          187 IRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSKLLK  266 (336)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~  266 (336)
                                   .+.+..|++||++++.+++.++.++...+  |++++++||++.|++.......       .......
T Consensus       159 -------------~~~~~~Y~~sK~a~~~~~~~~~~~~~~~~--i~~~~v~pg~v~t~~~~~~~~~-------~~~~~~~  216 (247)
T PRK08945        159 -------------RANWGAYAVSKFATEGMMQVLADEYQGTN--LRVNCINPGGTRTAMRASAFPG-------EDPQKLK  216 (247)
T ss_pred             -------------CCCCcccHHHHHHHHHHHHHHHHHhcccC--EEEEEEecCCccCcchhhhcCc-------ccccCCC
Confidence                         45666899999999999999999998877  9999999999999975432111       1123467


Q ss_pred             ChHHHHHHHHHHHhcCccccCCceeecc
Q 019722          267 TIPQGAATTCYVAIHPRLVNVSGKYFAD  294 (336)
Q Consensus       267 ~~~~~a~~~~~l~~~~~~~~~~G~~~~~  294 (336)
                      +|++++..+++++. +...+++|+.+.-
T Consensus       217 ~~~~~~~~~~~~~~-~~~~~~~g~~~~~  243 (247)
T PRK08945        217 TPEDIMPLYLYLMG-DDSRRKNGQSFDA  243 (247)
T ss_pred             CHHHHHHHHHHHhC-ccccccCCeEEeC
Confidence            89999999999875 6667899998743

>PRK05650 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.9e-31  Score=237.67  Aligned_cols=220  Identities=25%  Similarity=0.226  Sum_probs=187.3

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCCCc
Q 019722           36 VTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLPL  115 (336)
Q Consensus        36 k~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i  115 (336)
                      |+++||||+||||++++++|+++|++|++++|+.+++++..++++..  +.++.++++|+++++++..+++.+.+.++++
T Consensus         1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~i   78 (270)
T PRK05650          1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREA--GGDGFYQRCDVRDYSQLTALAQACEEKWGGI   78 (270)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            57999999999999999999999999999999999888888877665  5678999999999999999999999888999


Q ss_pred             cEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcccccccc
Q 019722          116 NLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQI  193 (336)
Q Consensus       116 d~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~~~  193 (336)
                      |+||||||.....  .+.+.+++++++++|+.+++.+++.++|.|.+.+     .++||++||..+..+           
T Consensus        79 d~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-----~~~iv~vsS~~~~~~-----------  142 (270)
T PRK05650         79 DVIVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQK-----SGRIVNIASMAGLMQ-----------  142 (270)
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCC-----CCEEEEECChhhcCC-----------
Confidence            9999999976542  5667789999999999999999999999998764     479999999887665           


Q ss_pred             cCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhH---HHHHHHHHHhhcCChHH
Q 019722          194 SRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFI---TDLVFFLTSKLLKTIPQ  270 (336)
Q Consensus       194 ~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~---~~~~~~~~~~~~~~~~~  270 (336)
                            .+....|+++|+++++++++++.|+.+.|  |++++|+||+++|++........   .............++++
T Consensus       143 ------~~~~~~Y~~sKaa~~~~~~~l~~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  214 (270)
T PRK05650        143 ------GPAMSSYNVAKAGVVALSETLLVELADDE--IGVHVVCPSFFQTNLLDSFRGPNPAMKAQVGKLLEKSPITAAD  214 (270)
T ss_pred             ------CCCchHHHHHHHHHHHHHHHHHHHhcccC--cEEEEEecCccccCcccccccCchhHHHHHHHHhhcCCCCHHH
Confidence                  56677899999999999999999998877  99999999999999877643211   12222222333468899


Q ss_pred             HHHHHHHHHhc
Q 019722          271 GAATTCYVAIH  281 (336)
Q Consensus       271 ~a~~~~~l~~~  281 (336)
                      +|..++..+..
T Consensus       215 vA~~i~~~l~~  225 (270)
T PRK05650        215 IADYIYQQVAK  225 (270)
T ss_pred             HHHHHHHHHhC
Confidence            99999999874

>PRK05993 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.8e-31  Score=241.49  Aligned_cols=217  Identities=25%  Similarity=0.290  Sum_probs=177.2

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcC-C
Q 019722           35 SVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLN-L  113 (336)
Q Consensus        35 gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~-~  113 (336)
                      +|+++||||++|||++++++|+++|++|++++|+.+.++++.    .    ..+.++.+|++|.++++.+++++.+.+ +
T Consensus         4 ~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l~----~----~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g   75 (277)
T PRK05993          4 KRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALE----A----EGLEAFQLDYAEPESIAALVAQVLELSGG   75 (277)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH----H----CCceEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            689999999999999999999999999999999987765432    1    257889999999999999999987655 6


Q ss_pred             CccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcccccc
Q 019722          114 PLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLG  191 (336)
Q Consensus       114 ~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~  191 (336)
                      ++|++|||||+....  .+.+.++++.++++|+.|++.+++.++|.|.+.+     .++||++||..+..+         
T Consensus        76 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~-----~g~iv~isS~~~~~~---------  141 (277)
T PRK05993         76 RLDALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQG-----QGRIVQCSSILGLVP---------  141 (277)
T ss_pred             CccEEEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcC-----CCEEEEECChhhcCC---------
Confidence            899999999976543  5667889999999999999999999999998765     489999999877654         


Q ss_pred             cccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHH---------------HH
Q 019722          192 QISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFIT---------------DL  256 (336)
Q Consensus       192 ~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~---------------~~  256 (336)
                              .+....|++||++++.++++++.|+.+.|  |+|++|+||+++|++.+.....+.               ..
T Consensus       142 --------~~~~~~Y~asK~a~~~~~~~l~~el~~~g--i~v~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~  211 (277)
T PRK05993        142 --------MKYRGAYNASKFAIEGLSLTLRMELQGSG--IHVSLIEPGPIETRFRANALAAFKRWIDIENSVHRAAYQQQ  211 (277)
T ss_pred             --------CCccchHHHHHHHHHHHHHHHHHHhhhhC--CEEEEEecCCccCchhhHHHHHHhhhhccccchhHHHHHHH
Confidence                    55667899999999999999999999888  999999999999998764321100               00


Q ss_pred             HHHH-----HHhhcCChHHHHHHHHHHHhcCc
Q 019722          257 VFFL-----TSKLLKTIPQGAATTCYVAIHPR  283 (336)
Q Consensus       257 ~~~~-----~~~~~~~~~~~a~~~~~l~~~~~  283 (336)
                      ....     ......+|++++..++..+.++.
T Consensus       212 ~~~~~~~~~~~~~~~~~~~va~~i~~a~~~~~  243 (277)
T PRK05993        212 MARLEGGGSKSRFKLGPEAVYAVLLHALTAPR  243 (277)
T ss_pred             HHHHHhhhhccccCCCHHHHHHHHHHHHcCCC
Confidence            0001     11123578899999999887553

>PRK07074 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.6e-31  Score=234.57  Aligned_cols=237  Identities=22%  Similarity=0.242  Sum_probs=194.8

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCCC
Q 019722           35 SVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLP  114 (336)
Q Consensus        35 gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  114 (336)
                      +|++|||||+++||.+++++|+++|++|++++|+.++.++..+.+.    +.++.++++|+.+.+++..+++++.+.+++
T Consensus         2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   77 (257)
T PRK07074          2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALG----DARFVPVACDLTDAASLAAALANAAAERGP   77 (257)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc----CCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            6899999999999999999999999999999999888877766652    457899999999999999999999888899


Q ss_pred             ccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccccccc
Q 019722          115 LNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQ  192 (336)
Q Consensus       115 id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~~  192 (336)
                      +|++|||+|.....  .+.+.++|++.+++|+.+++.+++++.+.+++++     .++||++||..+...          
T Consensus        78 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-----~~~iv~~sS~~~~~~----------  142 (257)
T PRK07074         78 VDVLVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRS-----RGAVVNIGSVNGMAA----------  142 (257)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-----CeEEEEEcchhhcCC----------
Confidence            99999999976543  4567788999999999999999999999998754     479999999754321          


Q ss_pred             ccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHHHHH----HHHhhcCCh
Q 019722          193 ISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFF----LTSKLLKTI  268 (336)
Q Consensus       193 ~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~----~~~~~~~~~  268 (336)
                              .+...|+.+|++++.++++++.++.+.|  |+||+++||++.|++..............    .+......+
T Consensus       143 --------~~~~~y~~sK~a~~~~~~~~a~~~~~~g--i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  212 (257)
T PRK07074        143 --------LGHPAYSAAKAGLIHYTKLLAVEYGRFG--IRANAVAPGTVKTQAWEARVAANPQVFEELKKWYPLQDFATP  212 (257)
T ss_pred             --------CCCcccHHHHHHHHHHHHHHHHHHhHhC--eEEEEEEeCcCCcchhhcccccChHHHHHHHhcCCCCCCCCH
Confidence                    2334799999999999999999999888  99999999999999865422111112111    122345788


Q ss_pred             HHHHHHHHHHHhcCccccCCceeeccCcccccc
Q 019722          269 PQGAATTCYVAIHPRLVNVSGKYFADCNEAWTS  301 (336)
Q Consensus       269 ~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~~  301 (336)
                      +|++.++++++. +...+++|+.+..+++...+
T Consensus       213 ~d~a~~~~~l~~-~~~~~~~g~~~~~~~g~~~~  244 (257)
T PRK07074        213 DDVANAVLFLAS-PAARAITGVCLPVDGGLTAG  244 (257)
T ss_pred             HHHHHHHHHHcC-chhcCcCCcEEEeCCCcCcC
Confidence            999999999986 66678899999888876654

>PRK12827 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.8e-31  Score=234.27  Aligned_cols=239  Identities=24%  Similarity=0.273  Sum_probs=191.9

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeC----ChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHH
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGARLVLPAR----SLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVS  106 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r----~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~  106 (336)
                      .++.+++++||||+++||++++++|+++|++|++++|    +.+..++..+++...  +.++.++.+|+++++++.++++
T Consensus         2 ~~~~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~   79 (249)
T PRK12827          2 ASLDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAA--GGKALGLAFDVRDFAATRAALD   79 (249)
T ss_pred             CCcCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHH
Confidence            3577899999999999999999999999999999765    344445555555433  4578999999999999999999


Q ss_pred             HHHhcCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHH-HHHHHhhccCCCCCeEEEEcCCcccccc
Q 019722          107 QFHSLNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLL-KKMIETAKATGIQGRIVNVSSSIHSWFS  183 (336)
Q Consensus       107 ~~~~~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~-~~l~~~~~~~~~~grIV~vsS~~~~~~~  183 (336)
                      ++.+.++++|++|||||.....  .+.+.+++++.+++|+.+++.+++++. +.++++.     .+++|++||..+..+ 
T Consensus        80 ~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-----~~~iv~~sS~~~~~~-  153 (249)
T PRK12827         80 AGVEEFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARR-----GGRIVNIASVAGVRG-  153 (249)
T ss_pred             HHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCC-----CeEEEEECCchhcCC-
Confidence            9988888999999999976532  556788899999999999999999999 5555443     479999999877665 


Q ss_pred             CCcccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHHHHHHHHh
Q 019722          184 GDMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSK  263 (336)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~  263 (336)
                                      .++...|+.+|++++.++++++.++.+.+  |++++|+||+++|++...... .+......+..
T Consensus       154 ----------------~~~~~~y~~sK~a~~~~~~~l~~~~~~~~--i~~~~i~pg~v~t~~~~~~~~-~~~~~~~~~~~  214 (249)
T PRK12827        154 ----------------NRGQVNYAASKAGLIGLTKTLANELAPRG--ITVNAVAPGAINTPMADNAAP-TEHLLNPVPVQ  214 (249)
T ss_pred             ----------------CCCCchhHHHHHHHHHHHHHHHHHhhhhC--cEEEEEEECCcCCCcccccch-HHHHHhhCCCc
Confidence                            45567899999999999999999998777  999999999999998765321 11122222223


Q ss_pred             hcCChHHHHHHHHHHHhcCccccCCceeeccCcc
Q 019722          264 LLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNE  297 (336)
Q Consensus       264 ~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~  297 (336)
                      ...++++++..+++++. +...+++|+++..+++
T Consensus       215 ~~~~~~~va~~~~~l~~-~~~~~~~g~~~~~~~g  247 (249)
T PRK12827        215 RLGEPDEVAALVAFLVS-DAASYVTGQVIPVDGG  247 (249)
T ss_pred             CCcCHHHHHHHHHHHcC-cccCCccCcEEEeCCC
Confidence            34578999999888886 5567889999988765

>PRK07832 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.5e-31  Score=238.22  Aligned_cols=235  Identities=23%  Similarity=0.201  Sum_probs=188.6

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCCCc
Q 019722           36 VTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLPL  115 (336)
Q Consensus        36 k~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i  115 (336)
                      |+++||||++|||++++++|+++|++|++++|+.+..++..++++... ...+.++++|+++++++.++++++.+.++++
T Consensus         1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   79 (272)
T PRK07832          1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALG-GTVPEHRALDISDYDAVAAFAADIHAAHGSM   79 (272)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-CCcceEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence            579999999999999999999999999999999988888777776542 2345668999999999999999999888999


Q ss_pred             cEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcccccccc
Q 019722          116 NLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQI  193 (336)
Q Consensus       116 d~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~~~  193 (336)
                      |++|||||.....  .+.+.++++..+++|+.+++.++++++|.|.+.+.    +++||++||..+..+           
T Consensus        80 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~----~g~ii~isS~~~~~~-----------  144 (272)
T PRK07832         80 DVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGR----GGHLVNVSSAAGLVA-----------  144 (272)
T ss_pred             CEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCC----CcEEEEEccccccCC-----------
Confidence            9999999975432  56788999999999999999999999999976421    479999999876554           


Q ss_pred             cCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccch-----h---HHHHHHHHHHhhc
Q 019722          194 SRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREG-----F---ITDLVFFLTSKLL  265 (336)
Q Consensus       194 ~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~-----~---~~~~~~~~~~~~~  265 (336)
                            .+....|+++|+++.+++++++.|+.+.+  |+|++|+||.++|++.+....     .   ....... .....
T Consensus       145 ------~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~  215 (272)
T PRK07832        145 ------LPWHAAYSASKFGLRGLSEVLRFDLARHG--IGVSVVVPGAVKTPLVNTVEIAGVDREDPRVQKWVDR-FRGHA  215 (272)
T ss_pred             ------CCCCcchHHHHHHHHHHHHHHHHHhhhcC--cEEEEEecCcccCcchhcccccccCcchhhHHHHHHh-cccCC
Confidence                  55677899999999999999999998877  999999999999998765310     0   1111111 12345


Q ss_pred             CChHHHHHHHHHHHhcCccccCCceeeccCcc
Q 019722          266 KTIPQGAATTCYVAIHPRLVNVSGKYFADCNE  297 (336)
Q Consensus       266 ~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~  297 (336)
                      .+|+++|..+++++..  .++++|..+..+..
T Consensus       216 ~~~~~vA~~~~~~~~~--~~~~~~~~~~~~~~  245 (272)
T PRK07832        216 VTPEKAAEKILAGVEK--NRYLVYTSPDIRAL  245 (272)
T ss_pred             CCHHHHHHHHHHHHhc--CCeEEecCcchHHH
Confidence            7899999999999963  24455554444443

>PRK12746 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.5e-31  Score=235.57  Aligned_cols=238  Identities=26%  Similarity=0.342  Sum_probs=190.8

Q ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEe-eCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHh
Q 019722           32 NLSSVTAIITGATSGIGAETARVLAKRGARLVLP-ARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHS  110 (336)
Q Consensus        32 ~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~-~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  110 (336)
                      ++++|+++||||++|||+++|++|+++|++|++. .|+.++.++..+.+...  +.++.++++|++|++++.++++++.+
T Consensus         3 ~~~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~d~~~i~~~~~~~~~   80 (254)
T PRK12746          3 NLDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESN--GGKAFLIEADLNSIDGVKKLVEQLKN   80 (254)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc--CCcEEEEEcCcCCHHHHHHHHHHHHH
Confidence            4788999999999999999999999999998775 78887777776666543  45788999999999999999999887


Q ss_pred             cC------CCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccc
Q 019722          111 LN------LPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWF  182 (336)
Q Consensus       111 ~~------~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~  182 (336)
                      .+      +++|++|||||.....  .+.+.+.|+.++++|+.+++.+++.+++.+.+       .+++|++||..+..+
T Consensus        81 ~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-------~~~~v~~sS~~~~~~  153 (254)
T PRK12746         81 ELQIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRA-------EGRVINISSAEVRLG  153 (254)
T ss_pred             HhccccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhc-------CCEEEEECCHHhcCC
Confidence            65      4799999999975443  45677889999999999999999999999854       369999999876554


Q ss_pred             cCCcccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccch--hHHHHH-HH
Q 019722          183 SGDMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREG--FITDLV-FF  259 (336)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~--~~~~~~-~~  259 (336)
                                       .++...|+++|++++.+++++++++.+.+  ++|++|+||++.|++.+....  ...... ..
T Consensus       154 -----------------~~~~~~Y~~sK~a~~~~~~~~~~~~~~~~--i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~  214 (254)
T PRK12746        154 -----------------FTGSIAYGLSKGALNTMTLPLAKHLGERG--ITVNTIMPGYTKTDINAKLLDDPEIRNFATNS  214 (254)
T ss_pred             -----------------CCCCcchHhhHHHHHHHHHHHHHHHhhcC--cEEEEEEECCccCcchhhhccChhHHHHHHhc
Confidence                             45567899999999999999999998877  999999999999998764321  111111 11


Q ss_pred             HHHhhcCChHHHHHHHHHHHhcCccccCCceeeccCccc
Q 019722          260 LTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEA  298 (336)
Q Consensus       260 ~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  298 (336)
                      ........++|++..+.+++. +...+++|+.+..+++.
T Consensus       215 ~~~~~~~~~~dva~~~~~l~~-~~~~~~~g~~~~i~~~~  252 (254)
T PRK12746        215 SVFGRIGQVEDIADAVAFLAS-SDSRWVTGQIIDVSGGF  252 (254)
T ss_pred             CCcCCCCCHHHHHHHHHHHcC-cccCCcCCCEEEeCCCc
Confidence            112334578999999888876 55567899888777653

>PRK06180 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.9e-31  Score=238.11  Aligned_cols=221  Identities=24%  Similarity=0.227  Sum_probs=180.8

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCC
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNL  113 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  113 (336)
                      .+|++|||||+||||++++++|+++|++|++++|++++++.+.+.    . +.++.++++|+++++++..+++.+.+.++
T Consensus         3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~----~-~~~~~~~~~D~~d~~~~~~~~~~~~~~~~   77 (277)
T PRK06180          3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEAL----H-PDRALARLLDVTDFDAIDAVVADAEATFG   77 (277)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhh----c-CCCeeEEEccCCCHHHHHHHHHHHHHHhC
Confidence            578999999999999999999999999999999998776544332    1 35788999999999999999999998889


Q ss_pred             CccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcccccc
Q 019722          114 PLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLG  191 (336)
Q Consensus       114 ~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~  191 (336)
                      ++|++|||||.....  .+.+.+++++++++|+.+++.++++++|.+++.+     .++||++||.++..+         
T Consensus        78 ~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-----~~~iv~iSS~~~~~~---------  143 (277)
T PRK06180         78 PIDVLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARR-----RGHIVNITSMGGLIT---------  143 (277)
T ss_pred             CCCEEEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccC-----CCEEEEEecccccCC---------
Confidence            999999999975432  5667788999999999999999999999998764     479999999887765         


Q ss_pred             cccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccc-------hhHHHHHH------
Q 019722          192 QISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRERE-------GFITDLVF------  258 (336)
Q Consensus       192 ~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~-------~~~~~~~~------  258 (336)
                              .++...|+++|++++.++++++.++.+.|  +++++|+||++.|++.....       ........      
T Consensus       144 --------~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~  213 (277)
T PRK06180        144 --------MPGIGYYCGSKFALEGISESLAKEVAPFG--IHVTAVEPGSFRTDWAGRSMVRTPRSIADYDALFGPIRQAR  213 (277)
T ss_pred             --------CCCcchhHHHHHHHHHHHHHHHHHhhhhC--cEEEEEecCCcccCccccccccCCCCcHhHHHHHHHHHHHH
Confidence                    56677899999999999999999998877  99999999999998744211       01111111      


Q ss_pred             -HHHHhhcCChHHHHHHHHHHHhcCc
Q 019722          259 -FLTSKLLKTIPQGAATTCYVAIHPR  283 (336)
Q Consensus       259 -~~~~~~~~~~~~~a~~~~~l~~~~~  283 (336)
                       ........+|++++..+++++..+.
T Consensus       214 ~~~~~~~~~~~~dva~~~~~~l~~~~  239 (277)
T PRK06180        214 EAKSGKQPGDPAKAAQAILAAVESDE  239 (277)
T ss_pred             HhhccCCCCCHHHHHHHHHHHHcCCC
Confidence             1112234688999999999987543

>PRK07024 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.1e-31  Score=238.35  Aligned_cols=211  Identities=25%  Similarity=0.287  Sum_probs=179.1

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCCC
Q 019722           35 SVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLP  114 (336)
Q Consensus        35 gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  114 (336)
                      +|+++||||++|||.+++++|+++|++|++++|+.+.+++..+++...  + ++.++++|+++++++.++++++.+.++.
T Consensus         2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~-~~~~~~~Dl~~~~~i~~~~~~~~~~~g~   78 (257)
T PRK07024          2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKA--A-RVSVYAADVRDADALAAAAADFIAAHGL   78 (257)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccC--C-eeEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence            479999999999999999999999999999999988877666655332  2 7999999999999999999999998899


Q ss_pred             ccEEEEcccCCCCC---CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcccccc
Q 019722          115 LNLLINNAGKFAHQ---HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLG  191 (336)
Q Consensus       115 id~lv~nAg~~~~~---~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~  191 (336)
                      +|++|||||.....   .+.+.+++++++++|+.|++.++++++|.|.+++     .++||++||.++..+         
T Consensus        79 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~-----~~~iv~isS~~~~~~---------  144 (257)
T PRK07024         79 PDVVIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAAR-----RGTLVGIASVAGVRG---------  144 (257)
T ss_pred             CCEEEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcC-----CCEEEEEechhhcCC---------
Confidence            99999999976432   2256788999999999999999999999998765     489999999887765         


Q ss_pred             cccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHHHHHHHHhhcCChHHH
Q 019722          192 QISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSKLLKTIPQG  271 (336)
Q Consensus       192 ~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~  271 (336)
                              .+....|++||++++.++++++.|+.+.|  |+|++|+||++.|++......         ......++++.
T Consensus       145 --------~~~~~~Y~asK~a~~~~~~~l~~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~---------~~~~~~~~~~~  205 (257)
T PRK07024        145 --------LPGAGAYSASKAAAIKYLESLRVELRPAG--VRVVTIAPGYIRTPMTAHNPY---------PMPFLMDADRF  205 (257)
T ss_pred             --------CCCCcchHHHHHHHHHHHHHHHHHhhccC--cEEEEEecCCCcCchhhcCCC---------CCCCccCHHHH
Confidence                    55667899999999999999999999877  999999999999997654210         01123578899


Q ss_pred             HHHHHHHHhc
Q 019722          272 AATTCYVAIH  281 (336)
Q Consensus       272 a~~~~~l~~~  281 (336)
                      +..++..+.+
T Consensus       206 a~~~~~~l~~  215 (257)
T PRK07024        206 AARAARAIAR  215 (257)
T ss_pred             HHHHHHHHhC
Confidence            9999988863

>PRK07904 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.6e-31  Score=236.37  Aligned_cols=213  Identities=21%  Similarity=0.203  Sum_probs=177.1

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCC-CEEEEeeCChHH-HHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhc
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRG-ARLVLPARSLKA-AEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSL  111 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G-~~V~~~~r~~~~-~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  111 (336)
                      .+|+++||||++|||+++|++|+++| ++|++++|+.++ +++..+++.... +.+++++++|++|++++.++++++.+ 
T Consensus         7 ~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~-~~~v~~~~~D~~~~~~~~~~~~~~~~-   84 (253)
T PRK07904          7 NPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAG-ASSVEVIDFDALDTDSHPKVIDAAFA-   84 (253)
T ss_pred             CCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcC-CCceEEEEecCCChHHHHHHHHHHHh-
Confidence            57899999999999999999999995 899999999886 777777776642 34799999999999999999999876 


Q ss_pred             CCCccEEEEcccCCCCCC--CCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcccc
Q 019722          112 NLPLNLLINNAGKFAHQH--AISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRY  189 (336)
Q Consensus       112 ~~~id~lv~nAg~~~~~~--~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~  189 (336)
                      ++++|++|+|+|......  ..+.++..+++++|+.+++.+++.++|.|.+++     .++||++||..+..+       
T Consensus        85 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~-----~~~iv~isS~~g~~~-------  152 (253)
T PRK07904         85 GGDVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQG-----FGQIIAMSSVAGERV-------  152 (253)
T ss_pred             cCCCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcC-----CceEEEEechhhcCC-------
Confidence            489999999999864431  123344557899999999999999999998865     489999999876544       


Q ss_pred             cccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHHHHHHHHhhcCChH
Q 019722          190 LGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSKLLKTIP  269 (336)
Q Consensus       190 ~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~  269 (336)
                                .+....|++||+++.+|+++++.|+.+.+  |+|++|+||+++|++......          .....+++
T Consensus       153 ----------~~~~~~Y~~sKaa~~~~~~~l~~el~~~~--i~v~~v~Pg~v~t~~~~~~~~----------~~~~~~~~  210 (253)
T PRK07904        153 ----------RRSNFVYGSTKAGLDGFYLGLGEALREYG--VRVLVVRPGQVRTRMSAHAKE----------APLTVDKE  210 (253)
T ss_pred             ----------CCCCcchHHHHHHHHHHHHHHHHHHhhcC--CEEEEEeeCceecchhccCCC----------CCCCCCHH
Confidence                      34556799999999999999999999887  999999999999998775321          11245789


Q ss_pred             HHHHHHHHHHhcC
Q 019722          270 QGAATTCYVAIHP  282 (336)
Q Consensus       270 ~~a~~~~~l~~~~  282 (336)
                      +.|..++..+..+
T Consensus       211 ~~A~~i~~~~~~~  223 (253)
T PRK07904        211 DVAKLAVTAVAKG  223 (253)
T ss_pred             HHHHHHHHHHHcC
Confidence            9999999998743

>PRK06924 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.6e-31  Score=235.77  Aligned_cols=233  Identities=21%  Similarity=0.225  Sum_probs=183.6

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCCh-HHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCCC
Q 019722           36 VTAIITGATSGIGAETARVLAKRGARLVLPARSL-KAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLP  114 (336)
Q Consensus        36 k~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~-~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  114 (336)
                      |++|||||++|||++++++|+++|++|++++|++ +.+++.    .... +.+++++++|+++++++.++++++.+.++.
T Consensus         2 k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~~~----~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   76 (251)
T PRK06924          2 RYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKL----AEQY-NSNLTFHSLDLQDVHELETNFNEILSSIQE   76 (251)
T ss_pred             cEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHHHH----Hhcc-CCceEEEEecCCCHHHHHHHHHHHHHhcCc
Confidence            6899999999999999999999999999999987 333322    2221 457889999999999999999998776542


Q ss_pred             --c--cEEEEcccCCCC---CCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcc
Q 019722          115 --L--NLLINNAGKFAH---QHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMI  187 (336)
Q Consensus       115 --i--d~lv~nAg~~~~---~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~  187 (336)
                        +  .++|+|||....   ..+.+.++|.+.+++|+.+++.++++++|.+.+.+.    .++||++||..+..+     
T Consensus        77 ~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~----~~~iv~~sS~~~~~~-----  147 (251)
T PRK06924         77 DNVSSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKV----DKRVINISSGAAKNP-----  147 (251)
T ss_pred             ccCCceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCC----CceEEEecchhhcCC-----
Confidence              2  289999997543   356788999999999999999999999999976421    479999999876554     


Q ss_pred             cccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccch----h---HHHHHHHH
Q 019722          188 RYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREG----F---ITDLVFFL  260 (336)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~----~---~~~~~~~~  260 (336)
                                  .++...|+++|++++.+++.++.|+.....+|+||+|+||++.|++......    .   ........
T Consensus       148 ------------~~~~~~Y~~sKaa~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~  215 (251)
T PRK06924        148 ------------YFGWSAYCSSKAGLDMFTQTVATEQEEEEYPVKIVAFSPGVMDTNMQAQIRSSSKEDFTNLDRFITLK  215 (251)
T ss_pred             ------------CCCcHHHhHHHHHHHHHHHHHHHHhhhcCCCeEEEEecCCccccHhHHHHHhcCcccchHHHHHHHHh
Confidence                        6678899999999999999999998644345999999999999998553211    1   11122222


Q ss_pred             HHhhcCChHHHHHHHHHHHhcCccccCCceeeccCc
Q 019722          261 TSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCN  296 (336)
Q Consensus       261 ~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~  296 (336)
                      +.....+|++++..+++++..+  .+++|+++.+++
T Consensus       216 ~~~~~~~~~dva~~~~~l~~~~--~~~~G~~~~v~~  249 (251)
T PRK06924        216 EEGKLLSPEYVAKALRNLLETE--DFPNGEVIDIDE  249 (251)
T ss_pred             hcCCcCCHHHHHHHHHHHHhcc--cCCCCCEeehhh
Confidence            3345678999999999999842  678999987765

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=100.00  E-value=1.4e-30  Score=231.67  Aligned_cols=242  Identities=26%  Similarity=0.281  Sum_probs=199.1

Q ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhc
Q 019722           32 NLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSL  111 (336)
Q Consensus        32 ~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  111 (336)
                      ++.+|+++||||+++||.+++++|+++|++|++++|+.++..+..+++...  +.++.++.+|+++++++.++++++.+.
T Consensus         3 ~~~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~   80 (251)
T PRK12826          3 DLEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAA--GGKARARQVDVRDRAALKAAVAAGVED   80 (251)
T ss_pred             CCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence            467899999999999999999999999999999999988887777777654  456899999999999999999999888


Q ss_pred             CCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccc-cccCCccc
Q 019722          112 NLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHS-WFSGDMIR  188 (336)
Q Consensus       112 ~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~-~~~~~~~~  188 (336)
                      ++++|++|||+|.....  ...+.+++++.+++|+.+++.+++.++|.+.+++     .+++|++||..+. .+      
T Consensus        81 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-----~~~ii~~ss~~~~~~~------  149 (251)
T PRK12826         81 FGRLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAG-----GGRIVLTSSVAGPRVG------  149 (251)
T ss_pred             hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-----CcEEEEEechHhhccC------
Confidence            89999999999976542  3567788999999999999999999999998764     4799999998765 33      


Q ss_pred             ccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhH-HHHH-HHHHHhhcC
Q 019722          189 YLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFI-TDLV-FFLTSKLLK  266 (336)
Q Consensus       189 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~-~~~~-~~~~~~~~~  266 (336)
                                 .+....|+.+|++++.+++.++.++...|  ++++.|+||.+.|+..+...... .... ...+.....
T Consensus       150 -----------~~~~~~y~~sK~a~~~~~~~~~~~~~~~~--i~~~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (251)
T PRK12826        150 -----------YPGLAHYAASKAGLVGFTRALALELAARN--ITVNSVHPGGVDTPMAGNLGDAQWAEAIAAAIPLGRLG  216 (251)
T ss_pred             -----------CCCccHHHHHHHHHHHHHHHHHHHHHHcC--eEEEEEeeCCCCcchhhhcCchHHHHHHHhcCCCCCCc
Confidence                       45567899999999999999999998877  99999999999999866543211 1111 111222456


Q ss_pred             ChHHHHHHHHHHHhcCccccCCceeeccCccccc
Q 019722          267 TIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWT  300 (336)
Q Consensus       267 ~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~  300 (336)
                      .++|++..+++++. +...+++|+.+..+++...
T Consensus       217 ~~~dva~~~~~l~~-~~~~~~~g~~~~~~~g~~~  249 (251)
T PRK12826        217 EPEDIAAAVLFLAS-DEARYITGQTLPVDGGATL  249 (251)
T ss_pred             CHHHHHHHHHHHhC-ccccCcCCcEEEECCCccC
Confidence            78999999998875 5556789999988876543

>PRK07060 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1e-30  Score=231.88  Aligned_cols=234  Identities=26%  Similarity=0.275  Sum_probs=188.6

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      .+++++|+++||||+++||+++++.|+++|++|++++|+.++.++..+..       .+.++.+|+++++++.++++.  
T Consensus         4 ~~~~~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~-------~~~~~~~D~~~~~~v~~~~~~--   74 (245)
T PRK07060          4 AFDFSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGET-------GCEPLRLDVGDDAAIRAALAA--   74 (245)
T ss_pred             ccccCCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-------CCeEEEecCCCHHHHHHHHHH--
Confidence            56789999999999999999999999999999999999987766544332       356788999999988887765  


Q ss_pred             hcCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcc
Q 019722          110 SLNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMI  187 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~  187 (336)
                        .+++|++|||||.....  .+.+.+++++.+++|+.+++.+++++.+.+.+...    .++||++||..+..+     
T Consensus        75 --~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~----~~~iv~~sS~~~~~~-----  143 (245)
T PRK07060         75 --AGAFDGLVNCAGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGR----GGSIVNVSSQAALVG-----  143 (245)
T ss_pred             --hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCC----CcEEEEEccHHHcCC-----
Confidence              46899999999976533  45677889999999999999999999999875421    379999999877655     


Q ss_pred             cccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchh---HHHHHHHHHHhh
Q 019722          188 RYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGF---ITDLVFFLTSKL  264 (336)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~---~~~~~~~~~~~~  264 (336)
                                  .+....|+.+|++++.+++.++.++.+.+  |++++|+||++.|++.+.....   ........+...
T Consensus       144 ------------~~~~~~y~~sK~a~~~~~~~~a~~~~~~~--i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~  209 (245)
T PRK07060        144 ------------LPDHLAYCASKAALDAITRVLCVELGPHG--IRVNSVNPTVTLTPMAAEAWSDPQKSGPMLAAIPLGR  209 (245)
T ss_pred             ------------CCCCcHhHHHHHHHHHHHHHHHHHHhhhC--eEEEEEeeCCCCCchhhhhccCHHHHHHHHhcCCCCC
Confidence                        45567899999999999999999998877  9999999999999986532111   111112223344


Q ss_pred             cCChHHHHHHHHHHHhcCccccCCceeeccCccc
Q 019722          265 LKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEA  298 (336)
Q Consensus       265 ~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  298 (336)
                      ...++|++..+++++. +...+++|+++..+|+.
T Consensus       210 ~~~~~d~a~~~~~l~~-~~~~~~~G~~~~~~~g~  242 (245)
T PRK07060        210 FAEVDDVAAPILFLLS-DAASMVSGVSLPVDGGY  242 (245)
T ss_pred             CCCHHHHHHHHHHHcC-cccCCccCcEEeECCCc
Confidence            5789999999999987 55578899999988864

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1.4e-30  Score=231.95  Aligned_cols=240  Identities=21%  Similarity=0.220  Sum_probs=190.3

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCC-hHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARS-LKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQF  108 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~-~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~  108 (336)
                      |+++++|++|||||+++||++++++|+++|++|++..|+ ........+.++..  +.++.++.+|+++++++..+++++
T Consensus         1 ~~~~~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~   78 (252)
T PRK06077          1 MYSLKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKEN--GGEGIGVLADVSTREGCETLAKAT   78 (252)
T ss_pred             CCCCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHc--CCeeEEEEeccCCHHHHHHHHHHH
Confidence            467889999999999999999999999999999887754 44444545555443  457889999999999999999999


Q ss_pred             HhcCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCc
Q 019722          109 HSLNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDM  186 (336)
Q Consensus       109 ~~~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~  186 (336)
                      .+.++++|++|||||.....  .+.+.+.+++.+++|+.+.+.+++++.|.+++       .+++|++||..+..+    
T Consensus        79 ~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-------~~~iv~~sS~~~~~~----  147 (252)
T PRK06077         79 IDRYGVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMRE-------GGAIVNIASVAGIRP----  147 (252)
T ss_pred             HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhc-------CcEEEEEcchhccCC----
Confidence            98889999999999975433  44566778999999999999999999999865       379999999877654    


Q ss_pred             ccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchh----HHHHHHHH-H
Q 019722          187 IRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGF----ITDLVFFL-T  261 (336)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~----~~~~~~~~-~  261 (336)
                                   .++...|+++|++++.++++++.++.+ +  |+++.|.||+++|++.......    ........ .
T Consensus       148 -------------~~~~~~Y~~sK~~~~~~~~~l~~~~~~-~--i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~  211 (252)
T PRK06077        148 -------------AYGLSIYGAMKAAVINLTKYLALELAP-K--IRVNAIAPGFVKTKLGESLFKVLGMSEKEFAEKFTL  211 (252)
T ss_pred             -------------CCCchHHHHHHHHHHHHHHHHHHHHhc-C--CEEEEEeeCCccChHHHhhhhcccccHHHHHHhcCc
Confidence                         667788999999999999999999987 6  9999999999999986543211    11111111 1


Q ss_pred             HhhcCChHHHHHHHHHHHhcCccccCCceeeccCcccccc
Q 019722          262 SKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWTS  301 (336)
Q Consensus       262 ~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~~  301 (336)
                      ......++|++..+++++..+   .++|+.++.+++....
T Consensus       212 ~~~~~~~~dva~~~~~~~~~~---~~~g~~~~i~~g~~~~  248 (252)
T PRK06077        212 MGKILDPEEVAEFVAAILKIE---SITGQVFVLDSGESLK  248 (252)
T ss_pred             CCCCCCHHHHHHHHHHHhCcc---ccCCCeEEecCCeecc
Confidence            123478899999999998633   4678888777765443

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1.2e-30  Score=230.88  Aligned_cols=220  Identities=25%  Similarity=0.279  Sum_probs=186.8

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHh
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHS  110 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  110 (336)
                      .++++|+++||||+++||++++++|+++|++|++++|+.++.++..+++...  +.++.++++|+++++++..+++++.+
T Consensus         3 ~~~~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   80 (239)
T PRK07666          3 QSLQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAY--GVKVVIATADVSDYEEVTAAIEQLKN   80 (239)
T ss_pred             ccCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHh--CCeEEEEECCCCCHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999999998887777777543  56899999999999999999999998


Q ss_pred             cCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccc
Q 019722          111 LNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIR  188 (336)
Q Consensus       111 ~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~  188 (336)
                      .++++|++|||||.....  .+.+.+++++.+++|+.+++.+++++.+.+.++.     .+++|++||..+..+      
T Consensus        81 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-----~~~iv~~ss~~~~~~------  149 (239)
T PRK07666         81 ELGSIDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQ-----SGDIINISSTAGQKG------  149 (239)
T ss_pred             HcCCccEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-----CcEEEEEcchhhccC------
Confidence            899999999999975432  4567788999999999999999999999998764     479999999887765      


Q ss_pred             ccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHHHHHHHHhhcCCh
Q 019722          189 YLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSKLLKTI  268 (336)
Q Consensus       189 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~  268 (336)
                                 .++...|+.+|++++.+++.++.++.+.|  |++++|+||.+.|++........      ........+
T Consensus       150 -----------~~~~~~Y~~sK~a~~~~~~~~a~e~~~~g--i~v~~v~pg~v~t~~~~~~~~~~------~~~~~~~~~  210 (239)
T PRK07666        150 -----------AAVTSAYSASKFGVLGLTESLMQEVRKHN--IRVTALTPSTVATDMAVDLGLTD------GNPDKVMQP  210 (239)
T ss_pred             -----------CCCCcchHHHHHHHHHHHHHHHHHhhccC--cEEEEEecCcccCcchhhccccc------cCCCCCCCH
Confidence                       45566799999999999999999998877  99999999999999865431100      011234678


Q ss_pred             HHHHHHHHHHHhcC
Q 019722          269 PQGAATTCYVAIHP  282 (336)
Q Consensus       269 ~~~a~~~~~l~~~~  282 (336)
                      +++++.++.++..+
T Consensus       211 ~~~a~~~~~~l~~~  224 (239)
T PRK07666        211 EDLAEFIVAQLKLN  224 (239)
T ss_pred             HHHHHHHHHHHhCC
Confidence            99999999999754

>PRK07775 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.3e-30  Score=232.86  Aligned_cols=226  Identities=27%  Similarity=0.349  Sum_probs=184.3

Q ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhc
Q 019722           32 NLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSL  111 (336)
Q Consensus        32 ~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  111 (336)
                      ++.+|+++||||+++||++++++|+++|++|++++|+.+.+++..+++...  +.++.++.+|+++++++.++++++.+.
T Consensus         7 ~~~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~   84 (274)
T PRK07775          7 HPDRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRAD--GGEAVAFPLDVTDPDSVKSFVAQAEEA   84 (274)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHHh
Confidence            467899999999999999999999999999999999988777766666544  457889999999999999999999888


Q ss_pred             CCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcccc
Q 019722          112 NLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRY  189 (336)
Q Consensus       112 ~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~  189 (336)
                      ++++|++|||||.....  .+.+.+.+++.+++|+.+++.++++++|.+.++.     .++||++||..+..+       
T Consensus        85 ~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~-----~g~iv~isS~~~~~~-------  152 (274)
T PRK07775         85 LGEIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERR-----RGDLIFVGSDVALRQ-------  152 (274)
T ss_pred             cCCCCEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-----CceEEEECChHhcCC-------
Confidence            88999999999975432  4567788999999999999999999999997654     479999999866544       


Q ss_pred             cccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccc-hhHHHHHHHHH------H
Q 019722          190 LGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRERE-GFITDLVFFLT------S  262 (336)
Q Consensus       190 ~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~-~~~~~~~~~~~------~  262 (336)
                                .+....|+.+|++++.+++.+++++...|  |++++|+||++.|++..... ...........      .
T Consensus       153 ----------~~~~~~Y~~sK~a~~~l~~~~~~~~~~~g--i~v~~v~pG~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (274)
T PRK07775        153 ----------RPHMGAYGAAKAGLEAMVTNLQMELEGTG--VRASIVHPGPTLTGMGWSLPAEVIGPMLEDWAKWGQARH  220 (274)
T ss_pred             ----------CCCcchHHHHHHHHHHHHHHHHHHhcccC--eEEEEEeCCcccCcccccCChhhhhHHHHHHHHhccccc
Confidence                      44566799999999999999999998777  99999999999999754321 11111111111      1


Q ss_pred             hhcCChHHHHHHHHHHHhcCc
Q 019722          263 KLLKTIPQGAATTCYVAIHPR  283 (336)
Q Consensus       263 ~~~~~~~~~a~~~~~l~~~~~  283 (336)
                      .....++|++.++++++.++.
T Consensus       221 ~~~~~~~dva~a~~~~~~~~~  241 (274)
T PRK07775        221 DYFLRASDLARAITFVAETPR  241 (274)
T ss_pred             ccccCHHHHHHHHHHHhcCCC
Confidence            235689999999999997653

>PRK09072 short chain dehydrogenase; Provisional

Probab=99.98  E-value=1.1e-30  Score=234.51  Aligned_cols=220  Identities=27%  Similarity=0.274  Sum_probs=184.7

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHh
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHS  110 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  110 (336)
                      |+++++++|||||++|||.+++++|+++|++|++++|+.+..++...++. .  +.++.++++|++|++++..+++.+.+
T Consensus         1 m~~~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~--~~~~~~~~~D~~d~~~~~~~~~~~~~   77 (263)
T PRK09072          1 MDLKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLP-Y--PGRHRWVVADLTSEAGREAVLARARE   77 (263)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHh-c--CCceEEEEccCCCHHHHHHHHHHHHh
Confidence            46789999999999999999999999999999999999988887777662 2  45899999999999999999998876


Q ss_pred             cCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccc
Q 019722          111 LNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIR  188 (336)
Q Consensus       111 ~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~  188 (336)
                       ++++|++|||||.....  .+.+.+++++++++|+.|++.+++.++|+|.+++     .++||++||..+..+      
T Consensus        78 -~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-----~~~iv~isS~~~~~~------  145 (263)
T PRK09072         78 -MGGINVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQP-----SAMVVNVGSTFGSIG------  145 (263)
T ss_pred             -cCCCCEEEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-----CCEEEEecChhhCcC------
Confidence             78999999999975432  5567789999999999999999999999998764     479999999877665      


Q ss_pred             ccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHHHHHHHHhhcCCh
Q 019722          189 YLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSKLLKTI  268 (336)
Q Consensus       189 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~  268 (336)
                                 .++...|+.+|+++..++++++.++.+.+  |+|++|+||+++|++.......   ..... .....++
T Consensus       146 -----------~~~~~~Y~~sK~a~~~~~~~l~~~~~~~~--i~v~~v~Pg~~~t~~~~~~~~~---~~~~~-~~~~~~~  208 (263)
T PRK09072        146 -----------YPGYASYCASKFALRGFSEALRRELADTG--VRVLYLAPRATRTAMNSEAVQA---LNRAL-GNAMDDP  208 (263)
T ss_pred             -----------CCCccHHHHHHHHHHHHHHHHHHHhcccC--cEEEEEecCcccccchhhhccc---ccccc-cCCCCCH
Confidence                       55667899999999999999999998877  9999999999999986542111   11111 1235688


Q ss_pred             HHHHHHHHHHHhcC
Q 019722          269 PQGAATTCYVAIHP  282 (336)
Q Consensus       269 ~~~a~~~~~l~~~~  282 (336)
                      ++++..+++++...
T Consensus       209 ~~va~~i~~~~~~~  222 (263)
T PRK09072        209 EDVAAAVLQAIEKE  222 (263)
T ss_pred             HHHHHHHHHHHhCC
Confidence            99999999999743

>PRK08251 short chain dehydrogenase; Provisional

Probab=99.98  E-value=1.7e-30  Score=231.03  Aligned_cols=212  Identities=25%  Similarity=0.290  Sum_probs=183.5

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCCC
Q 019722           35 SVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLP  114 (336)
Q Consensus        35 gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  114 (336)
                      +|+++||||++|||++++++|+++|++|++++|+.++.++....+....++.+++++++|+++++++.++++++.+.+++
T Consensus         2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   81 (248)
T PRK08251          2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELGG   81 (248)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            68999999999999999999999999999999999988888877776666778999999999999999999999998999


Q ss_pred             ccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccccccc
Q 019722          115 LNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQ  192 (336)
Q Consensus       115 id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~~  192 (336)
                      +|++|||||+....  ...+.+.+++.+++|+.+++.++++++|.+++.+     .++||++||..+..+          
T Consensus        82 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-----~~~iv~~sS~~~~~~----------  146 (248)
T PRK08251         82 LDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQG-----SGHLVLISSVSAVRG----------  146 (248)
T ss_pred             CCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-----CCeEEEEeccccccC----------
Confidence            99999999976543  4456678889999999999999999999998765     479999999877654          


Q ss_pred             ccCCCCCCC-hhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHHHHHHHHhhcCChHHH
Q 019722          193 ISRNKSHYD-ATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSKLLKTIPQG  271 (336)
Q Consensus       193 ~~~~~~~~~-~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~  271 (336)
                             .+ ....|+.||++++.+++.++.++...+  |++++|+||+++|++.+....          .....+++++
T Consensus       147 -------~~~~~~~Y~~sK~a~~~~~~~l~~~~~~~~--i~v~~v~pg~v~t~~~~~~~~----------~~~~~~~~~~  207 (248)
T PRK08251        147 -------LPGVKAAYAASKAGVASLGEGLRAELAKTP--IKVSTIEPGYIRSEMNAKAKS----------TPFMVDTETG  207 (248)
T ss_pred             -------CCCCcccHHHHHHHHHHHHHHHHHHhcccC--cEEEEEecCcCcchhhhcccc----------CCccCCHHHH
Confidence                   33 356799999999999999999998766  999999999999998765321          1234578899


Q ss_pred             HHHHHHHHh
Q 019722          272 AATTCYVAI  280 (336)
Q Consensus       272 a~~~~~l~~  280 (336)
                      +..++..+.
T Consensus       208 a~~i~~~~~  216 (248)
T PRK08251        208 VKALVKAIE  216 (248)
T ss_pred             HHHHHHHHh
Confidence            999988886

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.98  E-value=8.8e-31  Score=252.70  Aligned_cols=238  Identities=25%  Similarity=0.269  Sum_probs=193.0

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCCh--HHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSL--KAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQ  107 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~--~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~  107 (336)
                      ...++||++|||||++|||+++++.|+++|++|++++|..  +.+.+..++       ....++++|+++++++..+++.
T Consensus       205 ~~~~~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~-------~~~~~~~~Dv~~~~~~~~~~~~  277 (450)
T PRK08261        205 DRPLAGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANR-------VGGTALALDITAPDAPARIAEH  277 (450)
T ss_pred             ccCCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHH-------cCCeEEEEeCCCHHHHHHHHHH
Confidence            3457899999999999999999999999999999998853  223332222       1345789999999999999999


Q ss_pred             HHhcCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCC
Q 019722          108 FHSLNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGD  185 (336)
Q Consensus       108 ~~~~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~  185 (336)
                      +.+.++++|++|||||+....  .+.+.+.|+.++++|+.+++.+++++.+.+..+.     .++||++||..+..+   
T Consensus       278 ~~~~~g~id~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-----~g~iv~~SS~~~~~g---  349 (450)
T PRK08261        278 LAERHGGLDIVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGD-----GGRIVGVSSISGIAG---  349 (450)
T ss_pred             HHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcC-----CCEEEEECChhhcCC---
Confidence            998889999999999976543  5668899999999999999999999999654433     489999999887665   


Q ss_pred             cccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHHHHHH-HHhh
Q 019722          186 MIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFL-TSKL  264 (336)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~-~~~~  264 (336)
                                    .+++..|+++|+++++|+++++.++.+.|  |++|+|+||+++|++.........+....+ ....
T Consensus       350 --------------~~~~~~Y~asKaal~~~~~~la~el~~~g--i~v~~v~PG~i~t~~~~~~~~~~~~~~~~~~~l~~  413 (450)
T PRK08261        350 --------------NRGQTNYAASKAGVIGLVQALAPLLAERG--ITINAVAPGFIETQMTAAIPFATREAGRRMNSLQQ  413 (450)
T ss_pred             --------------CCCChHHHHHHHHHHHHHHHHHHHHhhhC--cEEEEEEeCcCcchhhhccchhHHHHHhhcCCcCC
Confidence                          55677899999999999999999999887  999999999999998776432212111111 1233


Q ss_pred             cCChHHHHHHHHHHHhcCccccCCceeeccCcccc
Q 019722          265 LKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAW  299 (336)
Q Consensus       265 ~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  299 (336)
                      ...|+|++.+++|+++ +...++||+.+.++|..-
T Consensus       414 ~~~p~dva~~~~~l~s-~~~~~itG~~i~v~g~~~  447 (450)
T PRK08261        414 GGLPVDVAETIAWLAS-PASGGVTGNVVRVCGQSL  447 (450)
T ss_pred             CCCHHHHHHHHHHHhC-hhhcCCCCCEEEECCCcc
Confidence            4679999999999986 778899999999998643

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.98  E-value=3.1e-30  Score=228.71  Aligned_cols=242  Identities=27%  Similarity=0.325  Sum_probs=196.0

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChH-HHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLK-AAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~-~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      +++++|+++||||+++||+++++.|+++|++|+++.|+.. ..+...++++..  +.++.++.+|+++++++.++++++.
T Consensus         1 ~~~~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~   78 (248)
T PRK05557          1 MSLEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGAL--GGKALAVQGDVSDAESVERAVDEAK   78 (248)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHHH
Confidence            4678899999999999999999999999999988887654 344555555433  5689999999999999999999998


Q ss_pred             hcCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcc
Q 019722          110 SLNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMI  187 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~  187 (336)
                      +.++++|++|||||.....  .+.+.+++++.+++|+.+.+.+.+++.+.+.+.+     .+++|++||..+..+     
T Consensus        79 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-----~~~~v~iss~~~~~~-----  148 (248)
T PRK05557         79 AEFGGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQR-----SGRIINISSVVGLMG-----  148 (248)
T ss_pred             HHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-----CeEEEEEcccccCcC-----
Confidence            8888999999999976543  4567788999999999999999999999998754     479999999876665     


Q ss_pred             cccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHH-HHHHHHHHhhcC
Q 019722          188 RYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFIT-DLVFFLTSKLLK  266 (336)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~-~~~~~~~~~~~~  266 (336)
                                  .++...|+.+|++++.+++.++.++...+  |++++|+||++.|++.+....... ......+.....
T Consensus       149 ------------~~~~~~y~~sk~a~~~~~~~~a~~~~~~~--i~~~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~  214 (248)
T PRK05557        149 ------------NPGQANYAASKAGVIGFTKSLARELASRG--ITVNAVAPGFIETDMTDALPEDVKEAILAQIPLGRLG  214 (248)
T ss_pred             ------------CCCCchhHHHHHHHHHHHHHHHHHhhhhC--eEEEEEecCccCCccccccChHHHHHHHhcCCCCCCc
Confidence                        44567899999999999999999998877  999999999999998766432221 111122223346


Q ss_pred             ChHHHHHHHHHHHhcCccccCCceeeccCcccc
Q 019722          267 TIPQGAATTCYVAIHPRLVNVSGKYFADCNEAW  299 (336)
Q Consensus       267 ~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  299 (336)
                      .+++++..+.+++. +...+++|+.+..+++..
T Consensus       215 ~~~~va~~~~~l~~-~~~~~~~g~~~~i~~~~~  246 (248)
T PRK05557        215 QPEEIASAVAFLAS-DEAAYITGQTLHVNGGMV  246 (248)
T ss_pred             CHHHHHHHHHHHcC-cccCCccccEEEecCCcc
Confidence            78999999988876 455778999998887643

>PRK06914 short chain dehydrogenase; Provisional

Probab=99.98  E-value=3.3e-30  Score=233.35  Aligned_cols=226  Identities=24%  Similarity=0.259  Sum_probs=186.3

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcC
Q 019722           33 LSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLN  112 (336)
Q Consensus        33 l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  112 (336)
                      |++|++|||||+|+||.++++.|+++|++|++++|+.+..++..+++.....+.++.++.+|++|++++.. ++++.+.+
T Consensus         1 ~~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~~~   79 (280)
T PRK06914          1 MNKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLKEI   79 (280)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHHHhc
Confidence            46899999999999999999999999999999999998887776666554334679999999999999999 88888888


Q ss_pred             CCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccccc
Q 019722          113 LPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYL  190 (336)
Q Consensus       113 ~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~  190 (336)
                      +++|++|||||.....  .+.+.+++++.+++|+.+++.+++.++|.|++.+     .++||++||..+..+        
T Consensus        80 ~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-----~~~iv~vsS~~~~~~--------  146 (280)
T PRK06914         80 GRIDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQK-----SGKIINISSISGRVG--------  146 (280)
T ss_pred             CCeeEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-----CCEEEEECcccccCC--------
Confidence            9999999999976543  4567789999999999999999999999998764     479999999877665        


Q ss_pred             ccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccc----------hhHHHHHHHH
Q 019722          191 GQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRERE----------GFITDLVFFL  260 (336)
Q Consensus       191 ~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~----------~~~~~~~~~~  260 (336)
                               .++...|+.+|++++.++++++.++.+.|  |+++.++||+++|+++....          .........+
T Consensus       147 ---------~~~~~~Y~~sK~~~~~~~~~l~~~~~~~~--i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (280)
T PRK06914        147 ---------FPGLSPYVSSKYALEGFSESLRLELKPFG--IDVALIEPGSYNTNIWEVGKQLAENQSETTSPYKEYMKKI  215 (280)
T ss_pred             ---------CCCCchhHHhHHHHHHHHHHHHHHhhhhC--CEEEEEecCCcccchhhccccccccccccccchHHHHHHH
Confidence                     55667899999999999999999998887  99999999999999765321          0111111111


Q ss_pred             ------HHhhcCChHHHHHHHHHHHhcCc
Q 019722          261 ------TSKLLKTIPQGAATTCYVAIHPR  283 (336)
Q Consensus       261 ------~~~~~~~~~~~a~~~~~l~~~~~  283 (336)
                            ......+++|+|.++++++.++.
T Consensus       216 ~~~~~~~~~~~~~~~dva~~~~~~~~~~~  244 (280)
T PRK06914        216 QKHINSGSDTFGNPIDVANLIVEIAESKR  244 (280)
T ss_pred             HHHHhhhhhccCCHHHHHHHHHHHHcCCC
Confidence                  12345789999999999998554

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=99.98  E-value=2.4e-30  Score=229.63  Aligned_cols=238  Identities=26%  Similarity=0.328  Sum_probs=190.3

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEE-eeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCCC
Q 019722           36 VTAIITGATSGIGAETARVLAKRGARLVL-PARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLP  114 (336)
Q Consensus        36 k~~lItGgs~gIG~aia~~L~~~G~~V~~-~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  114 (336)
                      |++|||||+++||++++++|+++|++|++ ..|+.+..++...+++..  +.++.++++|++|+++++++++++.+.+++
T Consensus         2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~   79 (247)
T PRK09730          2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQA--GGKAFVLQADISDENQVVAMFTAIDQHDEP   79 (247)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhC--CCeEEEEEccCCCHHHHHHHHHHHHHhCCC
Confidence            68999999999999999999999999887 467777777776666553  457899999999999999999999988999


Q ss_pred             ccEEEEcccCCCCC---CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcccccc
Q 019722          115 LNLLINNAGKFAHQ---HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLG  191 (336)
Q Consensus       115 id~lv~nAg~~~~~---~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~  191 (336)
                      +|++|||||.....   .+.+.++++.++++|+.+++.+++++++.+.+...  +.++++|++||..+..+         
T Consensus        80 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~--~~~g~~v~~sS~~~~~~---------  148 (247)
T PRK09730         80 LAALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHG--GSGGAIVNVSSAASRLG---------  148 (247)
T ss_pred             CCEEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCC--CCCcEEEEECchhhccC---------
Confidence            99999999975332   45677889999999999999999999999987521  12478999999877654         


Q ss_pred             cccCCCCCCCh-hhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccch--hHHHHHHHHHHhhcCCh
Q 019722          192 QISRNKSHYDA-TRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREG--FITDLVFFLTSKLLKTI  268 (336)
Q Consensus       192 ~~~~~~~~~~~-~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~--~~~~~~~~~~~~~~~~~  268 (336)
                              .+. +..|+++|++++.+++.++.++.+.+  |++++|+||+++|++......  .........+.....++
T Consensus       149 --------~~~~~~~Y~~sK~~~~~~~~~l~~~~~~~~--i~v~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  218 (247)
T PRK09730        149 --------APGEYVDYAASKGAIDTLTTGLSLEVAAQG--IRVNCVRPGFIYTEMHASGGEPGRVDRVKSNIPMQRGGQP  218 (247)
T ss_pred             --------CCCcccchHhHHHHHHHHHHHHHHHHHHhC--eEEEEEEeCCCcCcccccCCCHHHHHHHHhcCCCCCCcCH
Confidence                    222 34699999999999999999998877  999999999999997553211  11111111222234588


Q ss_pred             HHHHHHHHHHHhcCccccCCceeeccCcc
Q 019722          269 PQGAATTCYVAIHPRLVNVSGKYFADCNE  297 (336)
Q Consensus       269 ~~~a~~~~~l~~~~~~~~~~G~~~~~~~~  297 (336)
                      ++++..+++++. +...+++|+++..+|+
T Consensus       219 ~dva~~~~~~~~-~~~~~~~g~~~~~~g~  246 (247)
T PRK09730        219 EEVAQAIVWLLS-DKASYVTGSFIDLAGG  246 (247)
T ss_pred             HHHHHHHHhhcC-hhhcCccCcEEecCCC
Confidence            999999999887 4456789999988774

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=99.98  E-value=3.5e-30  Score=229.24  Aligned_cols=219  Identities=23%  Similarity=0.349  Sum_probs=178.0

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCCCc
Q 019722           36 VTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLPL  115 (336)
Q Consensus        36 k~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i  115 (336)
                      ++++||||++|||.++++.|+++|++|++++|+++++++..+.+     +.++.++.+|+++.+++..+++++.+.++++
T Consensus         1 ~~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~i   75 (248)
T PRK10538          1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDEL-----GDNLYIAQLDVRNRAAIEEMLASLPAEWRNI   75 (248)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-----ccceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            36899999999999999999999999999999988776655443     3478899999999999999999998888999


Q ss_pred             cEEEEcccCCC---CCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccccccc
Q 019722          116 NLLINNAGKFA---HQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQ  192 (336)
Q Consensus       116 d~lv~nAg~~~---~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~~  192 (336)
                      |++|||||...   +..+.+.+++++++++|+.+++.++++++|.|++++     .++||++||..+..+          
T Consensus        76 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-----~~~iv~isS~~~~~~----------  140 (248)
T PRK10538         76 DVLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERN-----HGHIINIGSTAGSWP----------  140 (248)
T ss_pred             CEEEECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-----CcEEEEECCcccCCC----------
Confidence            99999999743   235667889999999999999999999999998764     479999999876554          


Q ss_pred             ccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCcc--chhHHHHHHHHHHhhcCChHH
Q 019722          193 ISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRER--EGFITDLVFFLTSKLLKTIPQ  270 (336)
Q Consensus       193 ~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~--~~~~~~~~~~~~~~~~~~~~~  270 (336)
                             .++...|+.+|++++.+++.++.++.+.+  |+||+|+||.+.|++....  .................+|++
T Consensus       141 -------~~~~~~Y~~sK~~~~~~~~~l~~~~~~~~--i~v~~v~pg~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  211 (248)
T PRK10538        141 -------YAGGNVYGATKAFVRQFSLNLRTDLHGTA--VRVTDIEPGLVGGTEFSNVRFKGDDGKAEKTYQNTVALTPED  211 (248)
T ss_pred             -------CCCCchhHHHHHHHHHHHHHHHHHhcCCC--cEEEEEeCCeecccccchhhccCcHHHHHhhccccCCCCHHH
Confidence                   55667899999999999999999999877  9999999999985543321  111111111112223458999


Q ss_pred             HHHHHHHHHhcCc
Q 019722          271 GAATTCYVAIHPR  283 (336)
Q Consensus       271 ~a~~~~~l~~~~~  283 (336)
                      +|..+++++..+.
T Consensus       212 vA~~~~~l~~~~~  224 (248)
T PRK10538        212 VSEAVWWVATLPA  224 (248)
T ss_pred             HHHHHHHHhcCCC
Confidence            9999999997554

>PRK08267 short chain dehydrogenase; Provisional

Probab=99.98  E-value=3.9e-30  Score=230.44  Aligned_cols=215  Identities=21%  Similarity=0.170  Sum_probs=179.9

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhc-CCC
Q 019722           36 VTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSL-NLP  114 (336)
Q Consensus        36 k~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~-~~~  114 (336)
                      |++|||||++|||++++++|+++|++|++++|+.+..+++.+.+.    +.++.++++|+++.+++.++++.+.+. +++
T Consensus         2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~   77 (260)
T PRK08267          2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELG----AGNAWTGALDVTDRAAWDAALADFAAATGGR   77 (260)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhc----CCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            789999999999999999999999999999999887777655543    457999999999999999999988776 789


Q ss_pred             ccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccccccc
Q 019722          115 LNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQ  192 (336)
Q Consensus       115 id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~~  192 (336)
                      +|+||||||.....  .+.+.+++++++++|+.+++.+++++.+.|++++     .++||++||..+..+          
T Consensus        78 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-----~~~iv~isS~~~~~~----------  142 (260)
T PRK08267         78 LDVLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATP-----GARVINTSSASAIYG----------  142 (260)
T ss_pred             CCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-----CCEEEEeCchhhCcC----------
Confidence            99999999976543  5567789999999999999999999999998764     489999999887765          


Q ss_pred             ccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccch-hHHHHHHHHHHhhcCChHHH
Q 019722          193 ISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREG-FITDLVFFLTSKLLKTIPQG  271 (336)
Q Consensus       193 ~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~-~~~~~~~~~~~~~~~~~~~~  271 (336)
                             .+....|+.||++++.++++++.++.+.+  |++++|+||++.|++.+.... ......  .......+++++
T Consensus       143 -------~~~~~~Y~~sKaa~~~~~~~l~~~~~~~~--i~v~~i~pg~~~t~~~~~~~~~~~~~~~--~~~~~~~~~~~v  211 (260)
T PRK08267        143 -------QPGLAVYSATKFAVRGLTEALDLEWRRHG--IRVADVMPLFVDTAMLDGTSNEVDAGST--KRLGVRLTPEDV  211 (260)
T ss_pred             -------CCCchhhHHHHHHHHHHHHHHHHHhcccC--cEEEEEecCCcCCcccccccchhhhhhH--hhccCCCCHHHH
Confidence                   55677899999999999999999999877  999999999999998775211 111111  112234678999


Q ss_pred             HHHHHHHHh
Q 019722          272 AATTCYVAI  280 (336)
Q Consensus       272 a~~~~~l~~  280 (336)
                      +..++.++.
T Consensus       212 a~~~~~~~~  220 (260)
T PRK08267        212 AEAVWAAVQ  220 (260)
T ss_pred             HHHHHHHHh
Confidence            999999885

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=99.97  E-value=8.6e-31  Score=231.14  Aligned_cols=222  Identities=21%  Similarity=0.225  Sum_probs=174.8

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHCC--CEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCC
Q 019722           36 VTAIITGATSGIGAETARVLAKRG--ARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNL  113 (336)
Q Consensus        36 k~~lItGgs~gIG~aia~~L~~~G--~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  113 (336)
                      ++++||||++|||++++++|+++|  ..|++..|+....          ....++.++++|++++++++++.+    .++
T Consensus         1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~----------~~~~~~~~~~~Dls~~~~~~~~~~----~~~   66 (235)
T PRK09009          1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKPD----------FQHDNVQWHALDVTDEAEIKQLSE----QFT   66 (235)
T ss_pred             CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCccc----------cccCceEEEEecCCCHHHHHHHHH----hcC
Confidence            479999999999999999999985  5676667764321          114578999999999999888543    457


Q ss_pred             CccEEEEcccCCCCC--------CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCC
Q 019722          114 PLNLLINNAGKFAHQ--------HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGD  185 (336)
Q Consensus       114 ~id~lv~nAg~~~~~--------~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~  185 (336)
                      ++|++|||||.....        .+.+.+.|++.+++|+.+++.+++.++|.|.+++     .++|+++||..+..... 
T Consensus        67 ~id~li~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~-----~~~i~~iss~~~~~~~~-  140 (235)
T PRK09009         67 QLDWLINCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSE-----SAKFAVISAKVGSISDN-  140 (235)
T ss_pred             CCCEEEECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccC-----CceEEEEeecccccccC-
Confidence            899999999976421        3456678999999999999999999999997654     47999999865533210 


Q ss_pred             cccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHHHHHHHHhhc
Q 019722          186 MIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSKLL  265 (336)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~  265 (336)
                                   ..+++..|+++|++++.|+++++.|+.+..++|+||+|+||+++|++.++..       ...+....
T Consensus       141 -------------~~~~~~~Y~asK~a~~~~~~~la~e~~~~~~~i~v~~v~PG~v~t~~~~~~~-------~~~~~~~~  200 (235)
T PRK09009        141 -------------RLGGWYSYRASKAALNMFLKTLSIEWQRSLKHGVVLALHPGTTDTALSKPFQ-------QNVPKGKL  200 (235)
T ss_pred             -------------CCCCcchhhhhHHHHHHHHHHHHHHhhcccCCeEEEEEcccceecCCCcchh-------hccccCCC
Confidence                         1455678999999999999999999987434599999999999999976532       11223345


Q ss_pred             CChHHHHHHHHHHHhcCccccCCceeeccCccc
Q 019722          266 KTIPQGAATTCYVAIHPRLVNVSGKYFADCNEA  298 (336)
Q Consensus       266 ~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  298 (336)
                      .+|++++..+++++. +...+++|+++..+|..
T Consensus       201 ~~~~~~a~~~~~l~~-~~~~~~~g~~~~~~g~~  232 (235)
T PRK09009        201 FTPEYVAQCLLGIIA-NATPAQSGSFLAYDGET  232 (235)
T ss_pred             CCHHHHHHHHHHHHH-cCChhhCCcEEeeCCcC
Confidence            689999999999998 45568899999877653

>PRK07577 short chain dehydrogenase; Provisional

Probab=99.97  E-value=3.5e-30  Score=226.91  Aligned_cols=226  Identities=25%  Similarity=0.294  Sum_probs=182.7

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcC
Q 019722           33 LSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLN  112 (336)
Q Consensus        33 l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  112 (336)
                      |.+|+++||||+++||++++++|+++|++|++++|+...      .       ....++++|+++++++.++++++.+.+
T Consensus         1 ~~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~------~-------~~~~~~~~D~~~~~~~~~~~~~~~~~~   67 (234)
T PRK07577          1 MSSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAID------D-------FPGELFACDLADIEQTAATLAQINEIH   67 (234)
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCccc------c-------cCceEEEeeCCCHHHHHHHHHHHHHhC
Confidence            457999999999999999999999999999999998653      0       012468899999999999999988766


Q ss_pred             CCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccccc
Q 019722          113 LPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYL  190 (336)
Q Consensus       113 ~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~  190 (336)
                       ++|++|||||.....  .+.+.+++++.+++|+.+++.+.++++|.|++++     .++||++||.. .++        
T Consensus        68 -~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-----~~~iv~~sS~~-~~~--------  132 (234)
T PRK07577         68 -PVDAIVNNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLRE-----QGRIVNICSRA-IFG--------  132 (234)
T ss_pred             -CCcEEEECCCCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-----CcEEEEEcccc-ccC--------
Confidence             689999999976543  4567889999999999999999999999998764     47999999975 233        


Q ss_pred             ccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHH----HHHHHHHhhcC
Q 019722          191 GQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITD----LVFFLTSKLLK  266 (336)
Q Consensus       191 ~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~----~~~~~~~~~~~  266 (336)
                               .+....|+++|++++.++++++.++.+.|  |++++|+||++.|++.+........    .....+.....
T Consensus       133 ---------~~~~~~Y~~sK~a~~~~~~~~a~e~~~~g--i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  201 (234)
T PRK07577        133 ---------ALDRTSYSAAKSALVGCTRTWALELAEYG--ITVNAVAPGPIETELFRQTRPVGSEEEKRVLASIPMRRLG  201 (234)
T ss_pred             ---------CCCchHHHHHHHHHHHHHHHHHHHHHhhC--cEEEEEecCcccCcccccccccchhHHHHHhhcCCCCCCc
Confidence                     34566899999999999999999999877  9999999999999987653211111    11112222345


Q ss_pred             ChHHHHHHHHHHHhcCccccCCceeeccCccc
Q 019722          267 TIPQGAATTCYVAIHPRLVNVSGKYFADCNEA  298 (336)
Q Consensus       267 ~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  298 (336)
                      .|++++..+++++. +...+++|+++..+|+.
T Consensus       202 ~~~~~a~~~~~l~~-~~~~~~~g~~~~~~g~~  232 (234)
T PRK07577        202 TPEEVAAAIAFLLS-DDAGFITGQVLGVDGGG  232 (234)
T ss_pred             CHHHHHHHHHHHhC-cccCCccceEEEecCCc
Confidence            78999999999986 44578899999888764

>PRK06179 short chain dehydrogenase; Provisional

Probab=99.97  E-value=2.1e-30  Score=233.40  Aligned_cols=216  Identities=27%  Similarity=0.278  Sum_probs=178.5

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCC
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNL  113 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  113 (336)
                      ++|+++||||+||||++++++|+++|++|++++|+.+....          ..+++++++|++|+++++++++.+.+.++
T Consensus         3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~----------~~~~~~~~~D~~d~~~~~~~~~~~~~~~g   72 (270)
T PRK06179          3 NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAP----------IPGVELLELDVTDDASVQAAVDEVIARAG   72 (270)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhccc----------cCCCeeEEeecCCHHHHHHHHHHHHHhCC
Confidence            46899999999999999999999999999999999765421          24688999999999999999999999999


Q ss_pred             CccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcccccc
Q 019722          114 PLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLG  191 (336)
Q Consensus       114 ~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~  191 (336)
                      ++|+||||||+....  .+.+.+++++++++|+.+++.+++.++|.|++++     .++||++||..+..+         
T Consensus        73 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-----~~~iv~isS~~~~~~---------  138 (270)
T PRK06179         73 RIDVLVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQG-----SGRIINISSVLGFLP---------  138 (270)
T ss_pred             CCCEEEECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-----CceEEEECCccccCC---------
Confidence            999999999976543  5567889999999999999999999999998765     589999999877654         


Q ss_pred             cccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchh------HHHHH----HHH-
Q 019722          192 QISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGF------ITDLV----FFL-  260 (336)
Q Consensus       192 ~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~------~~~~~----~~~-  260 (336)
                              .+....|+++|++++.+++.++.|+.+.|  |++++|+||++.|++.......      .....    ... 
T Consensus       139 --------~~~~~~Y~~sK~a~~~~~~~l~~el~~~g--i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~  208 (270)
T PRK06179        139 --------APYMALYAASKHAVEGYSESLDHEVRQFG--IRVSLVEPAYTKTNFDANAPEPDSPLAEYDRERAVVSKAVA  208 (270)
T ss_pred             --------CCCccHHHHHHHHHHHHHHHHHHHHhhhC--cEEEEEeCCCcccccccccCCCCCcchhhHHHHHHHHHHHH
Confidence                    55667899999999999999999999877  9999999999999987653210      11000    011 


Q ss_pred             -HHhhcCChHHHHHHHHHHHhcCc
Q 019722          261 -TSKLLKTIPQGAATTCYVAIHPR  283 (336)
Q Consensus       261 -~~~~~~~~~~~a~~~~~l~~~~~  283 (336)
                       .......+++++..++.++..+.
T Consensus       209 ~~~~~~~~~~~va~~~~~~~~~~~  232 (270)
T PRK06179        209 KAVKKADAPEVVADTVVKAALGPW  232 (270)
T ss_pred             hccccCCCHHHHHHHHHHHHcCCC
Confidence             11234678999999999987543

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.97  E-value=6.6e-30  Score=226.31  Aligned_cols=241  Identities=28%  Similarity=0.321  Sum_probs=198.8

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHh
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHS  110 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  110 (336)
                      |+|.+|++|||||+++||.+++++|+++|++|++++|++++.+.....++..  +.++.++.+|+++++++..+++++..
T Consensus         1 ~~~~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   78 (246)
T PRK05653          1 MSLQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAA--GGEARVLVFDVSDEAAVRALIEAAVE   78 (246)
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhc--CCceEEEEccCCCHHHHHHHHHHHHH
Confidence            3677899999999999999999999999999999999998877777666544  56899999999999999999999988


Q ss_pred             cCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccc
Q 019722          111 LNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIR  188 (336)
Q Consensus       111 ~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~  188 (336)
                      .++++|++|||||.....  .+.+.+++++.++.|+.+.+.+++++.+.+.+.+     .++||++||..+..+      
T Consensus        79 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-----~~~ii~~ss~~~~~~------  147 (246)
T PRK05653         79 AFGALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKAR-----YGRIVNISSVSGVTG------  147 (246)
T ss_pred             HhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-----CcEEEEECcHHhccC------
Confidence            888999999999975543  4567788999999999999999999999997754     479999999866544      


Q ss_pred             ccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHH-HHHHHHhhcCC
Q 019722          189 YLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDL-VFFLTSKLLKT  267 (336)
Q Consensus       189 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~-~~~~~~~~~~~  267 (336)
                                 ......|+.+|++++.+++++++++.+.+  ++++.|+||.+.+++.........+. ....+......
T Consensus       148 -----------~~~~~~y~~sk~~~~~~~~~l~~~~~~~~--i~~~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  214 (246)
T PRK05653        148 -----------NPGQTNYSAAKAGVIGFTKALALELASRG--ITVNAVAPGFIDTDMTEGLPEEVKAEILKEIPLGRLGQ  214 (246)
T ss_pred             -----------CCCCcHhHhHHHHHHHHHHHHHHHHhhcC--eEEEEEEeCCcCCcchhhhhHHHHHHHHhcCCCCCCcC
Confidence                       44566799999999999999999988777  99999999999999876432222111 11222234467


Q ss_pred             hHHHHHHHHHHHhcCccccCCceeeccCccc
Q 019722          268 IPQGAATTCYVAIHPRLVNVSGKYFADCNEA  298 (336)
Q Consensus       268 ~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  298 (336)
                      +++++..+++++. +...+++|+++..+|+.
T Consensus       215 ~~dva~~~~~~~~-~~~~~~~g~~~~~~gg~  244 (246)
T PRK05653        215 PEEVANAVAFLAS-DAASYITGQVIPVNGGM  244 (246)
T ss_pred             HHHHHHHHHHHcC-chhcCccCCEEEeCCCe
Confidence            7999999999986 65677899999988864

>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.97  E-value=5.1e-32  Score=216.87  Aligned_cols=243  Identities=23%  Similarity=0.223  Sum_probs=207.1

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      +-+.+|-+++||||.+|+|++.+..|+.+|+.|++.+--.++..+.++++     +.++.|.++|++++.+++.++....
T Consensus         4 ~rs~kglvalvtggasglg~ataerlakqgasv~lldlp~skg~~vakel-----g~~~vf~padvtsekdv~aala~ak   78 (260)
T KOG1199|consen    4 LRSTKGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKEL-----GGKVVFTPADVTSEKDVRAALAKAK   78 (260)
T ss_pred             hhhhcCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHHh-----CCceEEeccccCcHHHHHHHHHHHH
Confidence            34568899999999999999999999999999999998888888888887     8899999999999999999999999


Q ss_pred             hcCCCccEEEEcccCCCCC--------CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccC-CCCCeEEEEcCCccc
Q 019722          110 SLNLPLNLLINNAGKFAHQ--------HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKAT-GIQGRIVNVSSSIHS  180 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~~~--------~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~-~~~grIV~vsS~~~~  180 (336)
                      .+||++|.+|||||+....        ...+.|++++.+++|+.|+|.++++....|-+..... +..|.|||+.|.++.
T Consensus        79 ~kfgrld~~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~aglmg~nepdq~gqrgviintasvaaf  158 (260)
T KOG1199|consen   79 AKFGRLDALVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGAGLMGENEPDQNGQRGVIINTASVAAF  158 (260)
T ss_pred             hhccceeeeeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehhhhhcCCCCCCCCcceEEEeeceeeee
Confidence            9999999999999965422        3467899999999999999999999999998765433 346899999999887


Q ss_pred             cccCCcccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHHHHHH
Q 019722          181 WFSGDMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFL  260 (336)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~  260 (336)
                      .+                 ..++.+|++||.++.+|+.-+++.++..|  ||+|.|.||.++||+....++-...++...
T Consensus       159 dg-----------------q~gqaaysaskgaivgmtlpiardla~~g--ir~~tiapglf~tpllsslpekv~~fla~~  219 (260)
T KOG1199|consen  159 DG-----------------QTGQAAYSASKGAIVGMTLPIARDLAGDG--IRFNTIAPGLFDTPLLSSLPEKVKSFLAQL  219 (260)
T ss_pred             cC-----------------ccchhhhhcccCceEeeechhhhhcccCc--eEEEeecccccCChhhhhhhHHHHHHHHHh
Confidence            66                 77889999999999999999999999988  999999999999999988765444444432


Q ss_pred             H--HhhcCChHHHHHHHHHHHhcCccccCCceeeccCcccc
Q 019722          261 T--SKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAW  299 (336)
Q Consensus       261 ~--~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  299 (336)
                      .  ..+++.|.|-+..+-..+..   .+++|+.|..+|...
T Consensus       220 ipfpsrlg~p~eyahlvqaiien---p~lngevir~dgalr  257 (260)
T KOG1199|consen  220 IPFPSRLGHPHEYAHLVQAIIEN---PYLNGEVIRFDGALR  257 (260)
T ss_pred             CCCchhcCChHHHHHHHHHHHhC---cccCCeEEEecceec
Confidence            2  34567888877776666653   567999999988644

>PRK12828 short chain dehydrogenase; Provisional

Probab=99.97  E-value=9.5e-30  Score=224.45  Aligned_cols=233  Identities=24%  Similarity=0.230  Sum_probs=192.7

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHh
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHS  110 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  110 (336)
                      +.+++|++|||||+++||++++++|+++|++|++++|++.+..+..+++..    ..+.++.+|+++.+++..+++++.+
T Consensus         3 ~~~~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~~   78 (239)
T PRK12828          3 HSLQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPA----DALRIGGIDLVDPQAARRAVDEVNR   78 (239)
T ss_pred             CCCCCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhh----cCceEEEeecCCHHHHHHHHHHHHH
Confidence            467899999999999999999999999999999999998877666665543    3467788999999999999999999


Q ss_pred             cCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccc
Q 019722          111 LNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIR  188 (336)
Q Consensus       111 ~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~  188 (336)
                      .++++|++||++|.....  ...+.+++++.+.+|+.+++.+++++.+.+.+++     .+++|++||..+..+      
T Consensus        79 ~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-----~~~iv~~sS~~~~~~------  147 (239)
T PRK12828         79 QFGRLDALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASG-----GGRIVNIGAGAALKA------  147 (239)
T ss_pred             HhCCcCEEEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcC-----CCEEEEECchHhccC------
Confidence            899999999999975432  4557788999999999999999999999998754     479999999876544      


Q ss_pred             ccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHHHHHHHHhhcCCh
Q 019722          189 YLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSKLLKTI  268 (336)
Q Consensus       189 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~  268 (336)
                                 .+....|+.+|++++.+++.++.++...+  |+++.|.||.+.|++.......       .......++
T Consensus       148 -----------~~~~~~y~~sk~a~~~~~~~~a~~~~~~~--i~~~~i~pg~v~~~~~~~~~~~-------~~~~~~~~~  207 (239)
T PRK12828        148 -----------GPGMGAYAAAKAGVARLTEALAAELLDRG--ITVNAVLPSIIDTPPNRADMPD-------ADFSRWVTP  207 (239)
T ss_pred             -----------CCCcchhHHHHHHHHHHHHHHHHHhhhcC--eEEEEEecCcccCcchhhcCCc-------hhhhcCCCH
Confidence                       45567899999999999999999988777  9999999999999864432110       011124578


Q ss_pred             HHHHHHHHHHHhcCccccCCceeeccCcccc
Q 019722          269 PQGAATTCYVAIHPRLVNVSGKYFADCNEAW  299 (336)
Q Consensus       269 ~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  299 (336)
                      ++++..+++++. +...+++|+.+..+|+..
T Consensus       208 ~dva~~~~~~l~-~~~~~~~g~~~~~~g~~~  237 (239)
T PRK12828        208 EQIAAVIAFLLS-DEAQAITGASIPVDGGVA  237 (239)
T ss_pred             HHHHHHHHHHhC-cccccccceEEEecCCEe
Confidence            999999998887 445578999998888653

>PRK07806 short chain dehydrogenase; Provisional

Probab=99.97  E-value=4.6e-30  Score=228.21  Aligned_cols=239  Identities=21%  Similarity=0.164  Sum_probs=185.3

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChH-HHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLK-AAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~-~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      .++++|+++||||++|||++++++|+++|++|++++|+.. ..+...++++..  +.++.++++|+++++++..+++++.
T Consensus         2 ~~~~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~   79 (248)
T PRK07806          2 GDLPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAA--GGRASAVGADLTDEESVAALMDTAR   79 (248)
T ss_pred             CCCCCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999999753 455555555543  4578899999999999999999998


Q ss_pred             hcCCCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcccc
Q 019722          110 SLNLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRY  189 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~  189 (336)
                      +.++++|++|||||.....    ..+++..+++|+.+++.+++.+.|.|.+       .+++|++||..+...+.     
T Consensus        80 ~~~~~~d~vi~~ag~~~~~----~~~~~~~~~vn~~~~~~l~~~~~~~~~~-------~~~iv~isS~~~~~~~~-----  143 (248)
T PRK07806         80 EEFGGLDALVLNASGGMES----GMDEDYAMRLNRDAQRNLARAALPLMPA-------GSRVVFVTSHQAHFIPT-----  143 (248)
T ss_pred             HhCCCCcEEEECCCCCCCC----CCCcceeeEeeeHHHHHHHHHHHhhccC-------CceEEEEeCchhhcCcc-----
Confidence            8888999999999864321    2235678899999999999999999854       36999999964432100     


Q ss_pred             cccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccch-hHHHH--HHHHHHhhcC
Q 019722          190 LGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREG-FITDL--VFFLTSKLLK  266 (336)
Q Consensus       190 ~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~-~~~~~--~~~~~~~~~~  266 (336)
                             ....+.+..|+.||++++.+++.++.++++.+  |+||+|+||.+.|++...... ..+..  ....+.....
T Consensus       144 -------~~~~~~~~~Y~~sK~a~e~~~~~l~~~~~~~~--i~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  214 (248)
T PRK07806        144 -------VKTMPEYEPVARSKRAGEDALRALRPELAEKG--IGFVVVSGDMIEGTVTATLLNRLNPGAIEARREAAGKLY  214 (248)
T ss_pred             -------ccCCccccHHHHHHHHHHHHHHHHHHHhhccC--eEEEEeCCccccCchhhhhhccCCHHHHHHHHhhhcccC
Confidence                   00134466899999999999999999999887  999999999999986543210 01111  1123344678


Q ss_pred             ChHHHHHHHHHHHhcCccccCCceeeccCcccc
Q 019722          267 TIPQGAATTCYVAIHPRLVNVSGKYFADCNEAW  299 (336)
Q Consensus       267 ~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  299 (336)
                      .|+|++.++++++.+   .+++|+.+..+|...
T Consensus       215 ~~~dva~~~~~l~~~---~~~~g~~~~i~~~~~  244 (248)
T PRK07806        215 TVSEFAAEVARAVTA---PVPSGHIEYVGGADY  244 (248)
T ss_pred             CHHHHHHHHHHHhhc---cccCccEEEecCccc
Confidence            999999999999973   456899888887643

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=99.97  E-value=1.5e-29  Score=225.36  Aligned_cols=236  Identities=33%  Similarity=0.366  Sum_probs=185.5

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHH--HHHHHHHHHhhCCC-CceEEEeccCCC-HHHHHHHHH
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKA--AEEAKARLASDCPG-SDIVVLPLDLSS-LSSVRNFVS  106 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~--~~~~~~~l~~~~~~-~~~~~~~~Dl~~-~~~v~~~~~  106 (336)
                      +++.+|++|||||++|||+++|++|+++|++|+++.|+...  .+...+...  ..+ ..+.+..+|+++ ..+++.+++
T Consensus         1 ~~~~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~Dvs~~~~~v~~~~~   78 (251)
T COG1028           1 MDLSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIK--EAGGGRAAAVAADVSDDEESVEALVA   78 (251)
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHH--hcCCCcEEEEEecCCCCHHHHHHHHH
Confidence            35789999999999999999999999999999988887654  333333333  112 378889999998 999999999


Q ss_pred             HHHhcCCCccEEEEcccCCC---CCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCcccccc
Q 019722          107 QFHSLNLPLNLLINNAGKFA---HQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFS  183 (336)
Q Consensus       107 ~~~~~~~~id~lv~nAg~~~---~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~  183 (336)
                      .+.+.+|++|++|||||+..   ...+.+.++|++++++|+.+.+.+++.+.|.+++       . +||++||..+. . 
T Consensus        79 ~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~-------~-~Iv~isS~~~~-~-  148 (251)
T COG1028          79 AAEEEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKK-------Q-RIVNISSVAGL-G-  148 (251)
T ss_pred             HHHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhh-------C-eEEEECCchhc-C-
Confidence            99999999999999999875   3467778999999999999999999988888872       3 99999999877 5 


Q ss_pred             CCcccccccccCCCCCCCh-hhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhH----HHHHH
Q 019722          184 GDMIRYLGQISRNKSHYDA-TRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFI----TDLVF  258 (336)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~-~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~----~~~~~  258 (336)
                                      .+. +.+|++||+++.+|++.++.|+.+.|  |++|+|+||++.|++.+......    .....
T Consensus       149 ----------------~~~~~~~Y~~sK~al~~~~~~l~~e~~~~g--i~v~~v~PG~~~t~~~~~~~~~~~~~~~~~~~  210 (251)
T COG1028         149 ----------------GPPGQAAYAASKAALIGLTKALALELAPRG--IRVNAVAPGYIDTPMTAALESAELEALKRLAA  210 (251)
T ss_pred             ----------------CCCCcchHHHHHHHHHHHHHHHHHHHhhhC--cEEEEEEeccCCCcchhhhhhhhhhHHHHHHh
Confidence                            344 57899999999999999999999888  99999999999999988643221    01111


Q ss_pred             HHHHhhcCChHHHHHHHHHHHhcCccccCCceeeccCc
Q 019722          259 FLTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCN  296 (336)
Q Consensus       259 ~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~  296 (336)
                      ..+..+...|.+.+..+.++.......+++|+.+..++
T Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~  248 (251)
T COG1028         211 RIPLGRLGTPEEVAAAVAFLASDEAASYITGQTLPVDG  248 (251)
T ss_pred             cCCCCCCcCHHHHHHHHHHHcCcchhccccCCEEEeCC
Confidence            10112455677888777777653334566776665333

>PRK05693 short chain dehydrogenase; Provisional

Probab=99.97  E-value=9.7e-30  Score=229.72  Aligned_cols=215  Identities=20%  Similarity=0.219  Sum_probs=174.5

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCCCc
Q 019722           36 VTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLPL  115 (336)
Q Consensus        36 k~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i  115 (336)
                      |++|||||++|||++++++|+++|++|++++|+.+..+...    .    ..+.++.+|+++.+++.++++.+.+.++++
T Consensus         2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~----~----~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   73 (274)
T PRK05693          2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALA----A----AGFTAVQLDVNDGAALARLAEELEAEHGGL   73 (274)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH----H----CCCeEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence            78999999999999999999999999999999987654432    1    246788999999999999999998888999


Q ss_pred             cEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcccccccc
Q 019722          116 NLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQI  193 (336)
Q Consensus       116 d~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~~~  193 (336)
                      |++|||||.....  .+.+.+++++.+++|+.+++.++++++|.|.+.      .++||++||..+..+           
T Consensus        74 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~------~g~iv~isS~~~~~~-----------  136 (274)
T PRK05693         74 DVLINNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRS------RGLVVNIGSVSGVLV-----------  136 (274)
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc------CCEEEEECCccccCC-----------
Confidence            9999999975432  556788999999999999999999999999764      379999999887665           


Q ss_pred             cCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchh-----------HH--HHHHHH
Q 019722          194 SRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGF-----------IT--DLVFFL  260 (336)
Q Consensus       194 ~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~-----------~~--~~~~~~  260 (336)
                            .+....|+++|++++.++++++.|+.+.|  |+|++|+||.|+|++.+.....           .+  +.....
T Consensus       137 ------~~~~~~Y~~sK~al~~~~~~l~~e~~~~g--i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  208 (274)
T PRK05693        137 ------TPFAGAYCASKAAVHALSDALRLELAPFG--VQVMEVQPGAIASQFASNASREAEQLLAEQSPWWPLREHIQAR  208 (274)
T ss_pred             ------CCCccHHHHHHHHHHHHHHHHHHHhhhhC--eEEEEEecCccccccccccccchhhcCCCCCccHHHHHHHHHH
Confidence                  45566899999999999999999999877  9999999999999987653210           11  001111


Q ss_pred             H---HhhcCChHHHHHHHHHHHhcCc
Q 019722          261 T---SKLLKTIPQGAATTCYVAIHPR  283 (336)
Q Consensus       261 ~---~~~~~~~~~~a~~~~~l~~~~~  283 (336)
                      .   .....++++.+..++..+..+.
T Consensus       209 ~~~~~~~~~~~~~~a~~i~~~~~~~~  234 (274)
T PRK05693        209 ARASQDNPTPAAEFARQLLAAVQQSP  234 (274)
T ss_pred             HHhccCCCCCHHHHHHHHHHHHhCCC
Confidence            0   1123478899999988886443

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.97  E-value=4.3e-29  Score=221.34  Aligned_cols=242  Identities=25%  Similarity=0.259  Sum_probs=194.4

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChH-HHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLK-AAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~-~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      .++..|++|||||+++||.+++++|+++|++|+++.|+.. ..+...+.+...  +.++.++.+|+++++++.++++++.
T Consensus         2 ~~~~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~   79 (249)
T PRK12825          2 GSLMGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEAL--GRRAQAVQADVTDKAALEAAVAAAV   79 (249)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhc--CCceEEEECCcCCHHHHHHHHHHHH
Confidence            3567799999999999999999999999999888666544 444455555443  4578999999999999999999998


Q ss_pred             hcCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcc
Q 019722          110 SLNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMI  187 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~  187 (336)
                      +.++++|++|||||.....  .+.+.+++++.+++|+.+++.+++.+.+++.+.+     .+++|++||..+..+     
T Consensus        80 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-----~~~~i~~SS~~~~~~-----  149 (249)
T PRK12825         80 ERFGRIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQR-----GGRIVNISSVAGLPG-----  149 (249)
T ss_pred             HHcCCCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-----CCEEEEECccccCCC-----
Confidence            8888999999999966543  4567888999999999999999999999998764     479999999877654     


Q ss_pred             cccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHHH-HHHHHhhcC
Q 019722          188 RYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLV-FFLTSKLLK  266 (336)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~-~~~~~~~~~  266 (336)
                                  .+....|+.+|++++.+++.+++++.+.+  |+++.|+||.+.|++............ ...+.....
T Consensus       150 ------------~~~~~~y~~sK~~~~~~~~~~~~~~~~~~--i~~~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (249)
T PRK12825        150 ------------WPGRSNYAAAKAGLVGLTKALARELAEYG--ITVNMVAPGDIDTDMKEATIEEAREAKDAETPLGRSG  215 (249)
T ss_pred             ------------CCCchHHHHHHHHHHHHHHHHHHHHhhcC--eEEEEEEECCccCCccccccchhHHhhhccCCCCCCc
Confidence                        45567899999999999999999998877  999999999999998766432111110 012222345


Q ss_pred             ChHHHHHHHHHHHhcCccccCCceeeccCcccc
Q 019722          267 TIPQGAATTCYVAIHPRLVNVSGKYFADCNEAW  299 (336)
Q Consensus       267 ~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  299 (336)
                      ++++++..+.+++. ....+++|++|..+++..
T Consensus       216 ~~~dva~~~~~~~~-~~~~~~~g~~~~i~~g~~  247 (249)
T PRK12825        216 TPEDIARAVAFLCS-DASDYITGQVIEVTGGVD  247 (249)
T ss_pred             CHHHHHHHHHHHhC-ccccCcCCCEEEeCCCEe
Confidence            78999999999986 445678999999988753

>PRK06181 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.8e-29  Score=226.42  Aligned_cols=220  Identities=26%  Similarity=0.270  Sum_probs=182.3

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCCC
Q 019722           35 SVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLP  114 (336)
Q Consensus        35 gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  114 (336)
                      ++++|||||++|||+++++.|+++|++|++++|+....++..+.+...  +.++.++.+|+++++++..+++++.+.+++
T Consensus         1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   78 (263)
T PRK06181          1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADH--GGEALVVPTDVSDAEACERLIEAAVARFGG   78 (263)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            578999999999999999999999999999999988877777776654  457899999999999999999999888899


Q ss_pred             ccEEEEcccCCCCC--CCC-CchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcccccc
Q 019722          115 LNLLINNAGKFAHQ--HAI-SEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLG  191 (336)
Q Consensus       115 id~lv~nAg~~~~~--~~~-~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~  191 (336)
                      +|++|||||.....  .+. +.+++++.+++|+.+++.+++.+.|.+.+.      .+++|++||..+..+         
T Consensus        79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~------~~~iv~~sS~~~~~~---------  143 (263)
T PRK06181         79 IDILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKAS------RGQIVVVSSLAGLTG---------  143 (263)
T ss_pred             CCEEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc------CCEEEEEecccccCC---------
Confidence            99999999976543  444 678899999999999999999999998764      379999999877654         


Q ss_pred             cccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHHHH--HHHHhhcCChH
Q 019722          192 QISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVF--FLTSKLLKTIP  269 (336)
Q Consensus       192 ~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~--~~~~~~~~~~~  269 (336)
                              .++...|+.+|++++.++++++.++...+  |++++|+||++.|++.+...........  ........+++
T Consensus       144 --------~~~~~~Y~~sK~~~~~~~~~l~~~~~~~~--i~~~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~  213 (263)
T PRK06181        144 --------VPTRSGYAASKHALHGFFDSLRIELADDG--VAVTVVCPGFVATDIRKRALDGDGKPLGKSPMQESKIMSAE  213 (263)
T ss_pred             --------CCCccHHHHHHHHHHHHHHHHHHHhhhcC--ceEEEEecCccccCcchhhccccccccccccccccCCCCHH
Confidence                    55567899999999999999999998877  9999999999999987643211100000  11112457899


Q ss_pred             HHHHHHHHHHhc
Q 019722          270 QGAATTCYVAIH  281 (336)
Q Consensus       270 ~~a~~~~~l~~~  281 (336)
                      +++..+++++..
T Consensus       214 dva~~i~~~~~~  225 (263)
T PRK06181        214 ECAEAILPAIAR  225 (263)
T ss_pred             HHHHHHHHHhhC
Confidence            999999999973

>PRK09135 pteridine reductase; Provisional

Probab=99.97  E-value=3.8e-29  Score=222.06  Aligned_cols=240  Identities=23%  Similarity=0.223  Sum_probs=186.3

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCCh-HHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSL-KAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~-~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      +.+.++++|||||+++||++++++|+++|++|++++|+. ...+...+.+.... +..+.++.+|+++.+++..+++++.
T Consensus         2 ~~~~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~   80 (249)
T PRK09135          2 MTDSAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALR-PGSAAALQADLLDPDALPELVAACV   80 (249)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhc-CCceEEEEcCCCCHHHHHHHHHHHH
Confidence            346789999999999999999999999999999999864 44455444544332 3468899999999999999999999


Q ss_pred             hcCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcc
Q 019722          110 SLNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMI  187 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~  187 (336)
                      +.++++|++|||||.....  .+.+.+++++++++|+.+++.+++++.|.+.++      .+++++++|..+..+     
T Consensus        81 ~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~------~~~~~~~~~~~~~~~-----  149 (249)
T PRK09135         81 AAFGRLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQ------RGAIVNITDIHAERP-----  149 (249)
T ss_pred             HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhC------CeEEEEEeChhhcCC-----
Confidence            8899999999999975432  445667899999999999999999999998765      368888877544332     


Q ss_pred             cccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccc-hhH-HHHHHHHHHhhc
Q 019722          188 RYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRERE-GFI-TDLVFFLTSKLL  265 (336)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~-~~~-~~~~~~~~~~~~  265 (336)
                                  .++...|+.||++++.+++.++.++.+ +  |++++|+||++.|++..... ... .......+....
T Consensus       150 ------------~~~~~~Y~~sK~~~~~~~~~l~~~~~~-~--i~~~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~  214 (249)
T PRK09135        150 ------------LKGYPVYCAAKAALEMLTRSLALELAP-E--VRVNAVAPGAILWPEDGNSFDEEARQAILARTPLKRI  214 (249)
T ss_pred             ------------CCCchhHHHHHHHHHHHHHHHHHHHCC-C--CeEEEEEeccccCccccccCCHHHHHHHHhcCCcCCC
Confidence                        556778999999999999999999864 4  99999999999999865321 111 111111112234


Q ss_pred             CChHHHHHHHHHHHhcCccccCCceeeccCcccc
Q 019722          266 KTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAW  299 (336)
Q Consensus       266 ~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  299 (336)
                      .+++|.+.++.+++. + ....+|+.|..+++..
T Consensus       215 ~~~~d~a~~~~~~~~-~-~~~~~g~~~~i~~g~~  246 (249)
T PRK09135        215 GTPEDIAEAVRFLLA-D-ASFITGQILAVDGGRS  246 (249)
T ss_pred             cCHHHHHHHHHHHcC-c-cccccCcEEEECCCee
Confidence            578899998888876 3 3456899888887643

>PRK12829 short chain dehydrogenase; Provisional

Probab=99.97  E-value=2.5e-29  Score=225.43  Aligned_cols=241  Identities=26%  Similarity=0.300  Sum_probs=192.1

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHh
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHS  110 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  110 (336)
                      ..+++|+++||||+++||++++++|+++|++|++++|+.+..++..++..    +.++.++.+|+++++++..+++++.+
T Consensus         7 ~~~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~   82 (264)
T PRK12829          7 KPLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLP----GAKVTATVADVADPAQVERVFDTAVE   82 (264)
T ss_pred             hccCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHh----cCceEEEEccCCCHHHHHHHHHHHHH
Confidence            34789999999999999999999999999999999999877666554442    23678999999999999999999988


Q ss_pred             cCCCccEEEEcccCCCCC---CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcc
Q 019722          111 LNLPLNLLINNAGKFAHQ---HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMI  187 (336)
Q Consensus       111 ~~~~id~lv~nAg~~~~~---~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~  187 (336)
                      .++++|+||||||.....   ...+.+++++++++|+.+++.+++.+.+.+...+.    +++||++||..+..+     
T Consensus        83 ~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~----~~~vv~~ss~~~~~~-----  153 (264)
T PRK12829         83 RFGGLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGH----GGVIIALSSVAGRLG-----  153 (264)
T ss_pred             HhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCC----CeEEEEecccccccC-----
Confidence            889999999999976332   45677899999999999999999999998876431    267888888766554     


Q ss_pred             cccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccch------------hHHH
Q 019722          188 RYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREG------------FITD  255 (336)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~------------~~~~  255 (336)
                                  .+....|+.+|++++.+++.++.++...+  +++++|+||++.|++......            ....
T Consensus       154 ------------~~~~~~y~~~K~a~~~~~~~l~~~~~~~~--i~~~~l~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (264)
T PRK12829        154 ------------YPGRTPYAASKWAVVGLVKSLAIELGPLG--IRVNAILPGIVRGPRMRRVIEARAQQLGIGLDEMEQE  219 (264)
T ss_pred             ------------CCCCchhHHHHHHHHHHHHHHHHHHhhcC--eEEEEEecCCcCChHHHHHhhhhhhccCCChhHHHHH
Confidence                        45566799999999999999999998777  999999999999987643211            0001


Q ss_pred             HHHHHHHhhcCChHHHHHHHHHHHhcCccccCCceeeccCcccc
Q 019722          256 LVFFLTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAW  299 (336)
Q Consensus       256 ~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  299 (336)
                      .....+.....++++.+.++++++. +....++|+.+..+++.+
T Consensus       220 ~~~~~~~~~~~~~~d~a~~~~~l~~-~~~~~~~g~~~~i~~g~~  262 (264)
T PRK12829        220 YLEKISLGRMVEPEDIAATALFLAS-PAARYITGQAISVDGNVE  262 (264)
T ss_pred             HHhcCCCCCCCCHHHHHHHHHHHcC-ccccCccCcEEEeCCCcc
Confidence            1111112235778999999888876 445667999998888654

>PRK08324 short chain dehydrogenase; Validated

Probab=99.97  E-value=6e-29  Score=250.55  Aligned_cols=243  Identities=23%  Similarity=0.214  Sum_probs=200.1

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      ...+.||++|||||+||||+++++.|+++|++|++++|+.+.++...+++...   .++.++.+|+++++++.++++++.
T Consensus       417 ~~~l~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~~---~~v~~v~~Dvtd~~~v~~~~~~~~  493 (681)
T PRK08324        417 PKPLAGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGP---DRALGVACDVTDEAAVQAAFEEAA  493 (681)
T ss_pred             CcCCCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhcc---CcEEEEEecCCCHHHHHHHHHHHH
Confidence            34578999999999999999999999999999999999998887777666442   478999999999999999999998


Q ss_pred             hcCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcc
Q 019722          110 SLNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMI  187 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~  187 (336)
                      +.++++|++|||||.....  .+.+.++|+..+++|+.+++.+++++.+.|++++.    +|+||++||..+..+     
T Consensus       494 ~~~g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~----~g~iV~vsS~~~~~~-----  564 (681)
T PRK08324        494 LAFGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGL----GGSIVFIASKNAVNP-----  564 (681)
T ss_pred             HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC----CcEEEEECCccccCC-----
Confidence            8899999999999976543  56688999999999999999999999999987542    379999999877665     


Q ss_pred             cccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCce--eCCCCCccch--------h-HHH-
Q 019722          188 RYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIV--RTRLTREREG--------F-ITD-  255 (336)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v--~T~~~~~~~~--------~-~~~-  255 (336)
                                  .++...|+++|++++.+++.++.++.+.|  |+||+|+||.+  .|+++.....        . ... 
T Consensus       565 ------------~~~~~~Y~asKaa~~~l~~~la~e~~~~g--Irvn~v~Pg~v~~~t~~~~~~~~~~~~~~~g~~~~~~  630 (681)
T PRK08324        565 ------------GPNFGAYGAAKAAELHLVRQLALELGPDG--IRVNGVNPDAVVRGSGIWTGEWIEARAAAYGLSEEEL  630 (681)
T ss_pred             ------------CCCcHHHHHHHHHHHHHHHHHHHHhcccC--eEEEEEeCceeecCCccccchhhhhhhhhccCChHHH
Confidence                        55677899999999999999999999877  99999999999  7887654210        0 000 


Q ss_pred             ---HHHHHHHhhcCChHHHHHHHHHHHhcCccccCCceeeccCcccc
Q 019722          256 ---LVFFLTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAW  299 (336)
Q Consensus       256 ---~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  299 (336)
                         ............++|++.++++++. +.....+|+.+..+|+..
T Consensus       631 ~~~~~~~~~l~~~v~~~DvA~a~~~l~s-~~~~~~tG~~i~vdgG~~  676 (681)
T PRK08324        631 EEFYRARNLLKREVTPEDVAEAVVFLAS-GLLSKTTGAIITVDGGNA  676 (681)
T ss_pred             HHHHHhcCCcCCccCHHHHHHHHHHHhC-ccccCCcCCEEEECCCch
Confidence               1111112234678999999999886 556778999998888754

>PRK07102 short chain dehydrogenase; Provisional

Probab=99.97  E-value=4.3e-29  Score=221.44  Aligned_cols=210  Identities=26%  Similarity=0.273  Sum_probs=177.4

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCCC
Q 019722           35 SVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLP  114 (336)
Q Consensus        35 gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  114 (336)
                      +|+++||||++|||.+++++|+++|++|++++|+.++.++..+++... ++.++.++++|+++++++.++++++.+   .
T Consensus         1 ~~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~---~   76 (243)
T PRK07102          1 MKKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRAR-GAVAVSTHELDILDTASHAAFLDSLPA---L   76 (243)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHh-cCCeEEEEecCCCChHHHHHHHHHHhh---c
Confidence            378999999999999999999999999999999998887777776543 346899999999999999999998765   4


Q ss_pred             ccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccccccc
Q 019722          115 LNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQ  192 (336)
Q Consensus       115 id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~~  192 (336)
                      +|++|||||.....  .+.+.+++.+.+++|+.+++.+++++.|.|.+++     .+++|++||..+..+          
T Consensus        77 ~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-----~~~iv~~sS~~~~~~----------  141 (243)
T PRK07102         77 PDIVLIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARG-----SGTIVGISSVAGDRG----------  141 (243)
T ss_pred             CCEEEECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCC-----CCEEEEEecccccCC----------
Confidence            69999999975443  4566788889999999999999999999998765     489999999877654          


Q ss_pred             ccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHHHHHHHHhhcCChHHHH
Q 019722          193 ISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSKLLKTIPQGA  272 (336)
Q Consensus       193 ~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~a  272 (336)
                             .+....|+.+|+++++++++++.++.+.|  |+|++|+||+++|++.....         .+.....++++++
T Consensus       142 -------~~~~~~Y~~sK~a~~~~~~~l~~el~~~g--i~v~~v~pg~v~t~~~~~~~---------~~~~~~~~~~~~a  203 (243)
T PRK07102        142 -------RASNYVYGSAKAALTAFLSGLRNRLFKSG--VHVLTVKPGFVRTPMTAGLK---------LPGPLTAQPEEVA  203 (243)
T ss_pred             -------CCCCcccHHHHHHHHHHHHHHHHHhhccC--cEEEEEecCcccChhhhccC---------CCccccCCHHHHH
Confidence                   44556799999999999999999999877  99999999999999765421         1123356789999


Q ss_pred             HHHHHHHhc
Q 019722          273 ATTCYVAIH  281 (336)
Q Consensus       273 ~~~~~l~~~  281 (336)
                      ..++..+..
T Consensus       204 ~~i~~~~~~  212 (243)
T PRK07102        204 KDIFRAIEK  212 (243)
T ss_pred             HHHHHHHhC
Confidence            999988873

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=99.97  E-value=5.1e-29  Score=222.13  Aligned_cols=237  Identities=24%  Similarity=0.282  Sum_probs=191.1

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCCC
Q 019722           35 SVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLP  114 (336)
Q Consensus        35 gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  114 (336)
                      +|++|||||+++||++++++|+++|++|++++|+.+..+...+.+...  +.++.++++|+++++++..+++++.+.+++
T Consensus         1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   78 (255)
T TIGR01963         1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDA--GGSVIYLVADVTKEDEIADMIAAAAAEFGG   78 (255)
T ss_pred             CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            579999999999999999999999999999999988877777666543  457999999999999999999999988889


Q ss_pred             ccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccccccc
Q 019722          115 LNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQ  192 (336)
Q Consensus       115 id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~~  192 (336)
                      +|++|||||.....  .+.+.+++++++++|+.+++.+++++++.|++..     .+++|++||..+..+          
T Consensus        79 ~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-----~~~~v~~ss~~~~~~----------  143 (255)
T TIGR01963        79 LDILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQG-----WGRIINIASAHGLVA----------  143 (255)
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-----CeEEEEEcchhhcCC----------
Confidence            99999999976543  4556788999999999999999999999997754     479999999766554          


Q ss_pred             ccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccch--------hHHHHHH-HH---
Q 019722          193 ISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREG--------FITDLVF-FL---  260 (336)
Q Consensus       193 ~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~--------~~~~~~~-~~---  260 (336)
                             .+....|+.+|++++.+++.++.++.+.+  |+++.++||.+.|++......        ....... .+   
T Consensus       144 -------~~~~~~y~~sk~a~~~~~~~~~~~~~~~~--i~v~~i~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  214 (255)
T TIGR01963       144 -------SPFKSAYVAAKHGLIGLTKVLALEVAAHG--ITVNAICPGYVRTPLVEKQIADQAKTRGIPEEQVIREVMLPG  214 (255)
T ss_pred             -------CCCCchhHHHHHHHHHHHHHHHHHhhhcC--eEEEEEecCccccHHHHHHHHhhhcccCCCchHHHHHHHHcc
Confidence                   45567899999999999999999988777  999999999999987433110        0000000 01   


Q ss_pred             -HHhhcCChHHHHHHHHHHHhcCccccCCceeeccCccc
Q 019722          261 -TSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEA  298 (336)
Q Consensus       261 -~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  298 (336)
                       .......++|++.++++++.. ....++|++|..+++.
T Consensus       215 ~~~~~~~~~~d~a~~~~~~~~~-~~~~~~g~~~~~~~g~  252 (255)
T TIGR01963       215 QPTKRFVTVDEVAETALFLASD-AAAGITGQAIVLDGGW  252 (255)
T ss_pred             CccccCcCHHHHHHHHHHHcCc-cccCccceEEEEcCcc
Confidence             112356789999999999874 3355689988887653

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK07041 short chain dehydrogenase; Provisional

Probab=99.97  E-value=3.1e-29  Score=220.43  Aligned_cols=220  Identities=20%  Similarity=0.256  Sum_probs=176.3

Q ss_pred             EEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCCCccEE
Q 019722           39 IITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLPLNLL  118 (336)
Q Consensus        39 lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~l  118 (336)
                      |||||++|||++++++|+++|++|++++|+.+..+...++++.   +.+++++.+|+++++++.+++++    .+++|++
T Consensus         1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~----~~~id~l   73 (230)
T PRK07041          1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGG---GAPVRTAALDITDEAAVDAFFAE----AGPFDHV   73 (230)
T ss_pred             CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc---CCceEEEEccCCCHHHHHHHHHh----cCCCCEE
Confidence            6999999999999999999999999999998877776666542   46788999999999999998875    3689999


Q ss_pred             EEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcccccccccCC
Q 019722          119 INNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRN  196 (336)
Q Consensus       119 v~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~~~~~~  196 (336)
                      |||+|.....  .+.+.+++++++++|+.+++.+++  .+.+.+       .++||++||.++..+              
T Consensus        74 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~--~~~~~~-------~g~iv~~ss~~~~~~--------------  130 (230)
T PRK07041         74 VITAADTPGGPVRALPLAAAQAAMDSKFWGAYRVAR--AARIAP-------GGSLTFVSGFAAVRP--------------  130 (230)
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHh--hhhhcC-------CeEEEEECchhhcCC--------------
Confidence            9999975542  456788999999999999999999  444432       479999999877654              


Q ss_pred             CCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchh-----HHHHHHHHHHhhcCChHHH
Q 019722          197 KSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGF-----ITDLVFFLTSKLLKTIPQG  271 (336)
Q Consensus       197 ~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~  271 (336)
                         .+....|+.+|+++++++++++.|+.+    ||||+++||++.|++.......     ........+..+...|+|+
T Consensus       131 ---~~~~~~Y~~sK~a~~~~~~~la~e~~~----irv~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv  203 (230)
T PRK07041        131 ---SASGVLQGAINAALEALARGLALELAP----VRVNTVSPGLVDTPLWSKLAGDAREAMFAAAAERLPARRVGQPEDV  203 (230)
T ss_pred             ---CCcchHHHHHHHHHHHHHHHHHHHhhC----ceEEEEeecccccHHHHhhhccchHHHHHHHHhcCCCCCCcCHHHH
Confidence               556778999999999999999999874    9999999999999986543211     1111111222344678999


Q ss_pred             HHHHHHHHhcCccccCCceeeccCccc
Q 019722          272 AATTCYVAIHPRLVNVSGKYFADCNEA  298 (336)
Q Consensus       272 a~~~~~l~~~~~~~~~~G~~~~~~~~~  298 (336)
                      +..+++++.+   .+++|+.+..+|+.
T Consensus       204 a~~~~~l~~~---~~~~G~~~~v~gg~  227 (230)
T PRK07041        204 ANAILFLAAN---GFTTGSTVLVDGGH  227 (230)
T ss_pred             HHHHHHHhcC---CCcCCcEEEeCCCe
Confidence            9999999873   46899998888764

>PRK06482 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.2e-28  Score=222.66  Aligned_cols=219  Identities=26%  Similarity=0.300  Sum_probs=176.9

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCCC
Q 019722           35 SVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLP  114 (336)
Q Consensus        35 gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  114 (336)
                      .|++|||||+|+||++++++|+++|++|++++|+.+..++..+..     +.++.++++|+++.+++.++++++.+.+++
T Consensus         2 ~k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   76 (276)
T PRK06482          2 SKTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARY-----GDRLWVLQLDVTDSAAVRAVVDRAFAALGR   76 (276)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc-----cCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            378999999999999999999999999999999987665544332     347899999999999999999998888889


Q ss_pred             ccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccccccc
Q 019722          115 LNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQ  192 (336)
Q Consensus       115 id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~~  192 (336)
                      +|+||||||.....  .+.+.+++++.+++|+.+++.++++++|+|++..     .++||++||..+..+          
T Consensus        77 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-----~~~iv~~sS~~~~~~----------  141 (276)
T PRK06482         77 IDVVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQG-----GGRIVQVSSEGGQIA----------  141 (276)
T ss_pred             CCEEEECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-----CCEEEEEcCcccccC----------
Confidence            99999999976543  4566788999999999999999999999998754     479999999876544          


Q ss_pred             ccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccch----------hHHHHHHHHHH
Q 019722          193 ISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREG----------FITDLVFFLTS  262 (336)
Q Consensus       193 ~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~----------~~~~~~~~~~~  262 (336)
                             .+....|+.||++++.++++++.++.+.|  |+++.|+||.+.|++......          ........+..
T Consensus       142 -------~~~~~~Y~~sK~a~~~~~~~l~~~~~~~g--i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  212 (276)
T PRK06482        142 -------YPGFSLYHATKWGIEGFVEAVAQEVAPFG--IEFTIVEPGPARTNFGAGLDRGAPLDAYDDTPVGDLRRALAD  212 (276)
T ss_pred             -------CCCCchhHHHHHHHHHHHHHHHHHhhccC--cEEEEEeCCccccCCcccccccCCCccccchhhHHHHHHHhh
Confidence                   55677899999999999999999998877  999999999999987653210          01111111111


Q ss_pred             ---hhcCChHHHHHHHHHHHhcC
Q 019722          263 ---KLLKTIPQGAATTCYVAIHP  282 (336)
Q Consensus       263 ---~~~~~~~~~a~~~~~l~~~~  282 (336)
                         .....+++.+.+++..+..+
T Consensus       213 ~~~~~~~d~~~~~~a~~~~~~~~  235 (276)
T PRK06482        213 GSFAIPGDPQKMVQAMIASADQT  235 (276)
T ss_pred             ccCCCCCCHHHHHHHHHHHHcCC
Confidence               11257899999999988633

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.97  E-value=4.1e-29  Score=251.96  Aligned_cols=217  Identities=27%  Similarity=0.268  Sum_probs=185.1

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      ..+++||+++||||++|||++++++|+++|++|++++|+++.+++..+++...  +.++.++++|+++.+++.++++++.
T Consensus       366 ~~~~~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~~~~~~~~~~  443 (657)
T PRK07201        366 RGPLVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAK--GGTAHAYTCDLTDSAAVDHTVKDIL  443 (657)
T ss_pred             ccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHHH
Confidence            34688999999999999999999999999999999999999888888877654  5679999999999999999999999


Q ss_pred             hcCCCccEEEEcccCCCCC--CCC--CchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCC
Q 019722          110 SLNLPLNLLINNAGKFAHQ--HAI--SEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGD  185 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~~~--~~~--~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~  185 (336)
                      +.++++|++|||||.....  .+.  ..+++++++++|+.+++.+++.++|.|++++     .++||++||.++..+   
T Consensus       444 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-----~g~iv~isS~~~~~~---  515 (657)
T PRK07201        444 AEHGHVDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERR-----FGHVVNVSSIGVQTN---  515 (657)
T ss_pred             HhcCCCCEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcC-----CCEEEEECChhhcCC---
Confidence            9999999999999975332  111  2468999999999999999999999998765     489999999876654   


Q ss_pred             cccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHHHHHHHHhhc
Q 019722          186 MIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSKLL  265 (336)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~  265 (336)
                                    .+....|++||+++++++++++.|+.+.|  |+||+|+||+++|++.......        .....
T Consensus       516 --------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~~--i~v~~v~pg~v~T~~~~~~~~~--------~~~~~  571 (657)
T PRK07201        516 --------------APRFSAYVASKAALDAFSDVAASETLSDG--ITFTTIHMPLVRTPMIAPTKRY--------NNVPT  571 (657)
T ss_pred             --------------CCCcchHHHHHHHHHHHHHHHHHHHHhhC--CcEEEEECCcCcccccCccccc--------cCCCC
Confidence                          55677899999999999999999999877  9999999999999997653110        11234


Q ss_pred             CChHHHHHHHHHHHh
Q 019722          266 KTIPQGAATTCYVAI  280 (336)
Q Consensus       266 ~~~~~~a~~~~~l~~  280 (336)
                      .+|+++|..++..+.
T Consensus       572 ~~~~~~a~~i~~~~~  586 (657)
T PRK07201        572 ISPEEAADMVVRAIV  586 (657)
T ss_pred             CCHHHHHHHHHHHHH
Confidence            678899999888776

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.97  E-value=1.8e-28  Score=216.52  Aligned_cols=235  Identities=19%  Similarity=0.170  Sum_probs=188.4

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHh
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHS  110 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  110 (336)
                      |++++|+++||||+++||.++++.|+++|++|++++|++++.+...+.+..   ..+++++++|+++++++.++++++..
T Consensus         1 ~~~~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~~~   77 (238)
T PRK05786          1 MRLKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSK---YGNIHYVVGDVSSTESARNVIEKAAK   77 (238)
T ss_pred             CCcCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh---cCCeEEEECCCCCHHHHHHHHHHHHH
Confidence            357899999999999999999999999999999999998877766555543   23689999999999999999999988


Q ss_pred             cCCCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccccc
Q 019722          111 LNLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYL  190 (336)
Q Consensus       111 ~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~  190 (336)
                      .++++|.+|+|+|........+.+++++++++|+.+++.+++.++|.+.+       .+++|++||..+...+       
T Consensus        78 ~~~~id~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-------~~~iv~~ss~~~~~~~-------  143 (238)
T PRK05786         78 VLNAIDGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKE-------GSSIVLVSSMSGIYKA-------  143 (238)
T ss_pred             HhCCCCEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhc-------CCEEEEEecchhcccC-------
Confidence            78899999999996543322234788999999999999999999999864       3799999997654321       


Q ss_pred             ccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHHHHHHHHhhcCChHH
Q 019722          191 GQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSKLLKTIPQ  270 (336)
Q Consensus       191 ~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~  270 (336)
                               .+....|+.+|++++.+++.++.++...+  |++++|+||++.|++....  .+.. ... ......++++
T Consensus       144 ---------~~~~~~Y~~sK~~~~~~~~~~~~~~~~~g--i~v~~i~pg~v~~~~~~~~--~~~~-~~~-~~~~~~~~~~  208 (238)
T PRK05786        144 ---------SPDQLSYAVAKAGLAKAVEILASELLGRG--IRVNGIAPTTISGDFEPER--NWKK-LRK-LGDDMAPPED  208 (238)
T ss_pred             ---------CCCchHHHHHHHHHHHHHHHHHHHHhhcC--eEEEEEecCccCCCCCchh--hhhh-hcc-ccCCCCCHHH
Confidence                     34566799999999999999999998877  9999999999999874321  0000 000 0112467889


Q ss_pred             HHHHHHHHHhcCccccCCceeeccCccc
Q 019722          271 GAATTCYVAIHPRLVNVSGKYFADCNEA  298 (336)
Q Consensus       271 ~a~~~~~l~~~~~~~~~~G~~~~~~~~~  298 (336)
                      ++..+++++. +...+++|+++..+|..
T Consensus       209 va~~~~~~~~-~~~~~~~g~~~~~~~~~  235 (238)
T PRK05786        209 FAKVIIWLLT-DEADWVDGVVIPVDGGA  235 (238)
T ss_pred             HHHHHHHHhc-ccccCccCCEEEECCcc
Confidence            9999999997 55667899988877654

>PRK07326 short chain dehydrogenase; Provisional

Probab=99.97  E-value=2.1e-28  Score=216.06  Aligned_cols=218  Identities=25%  Similarity=0.294  Sum_probs=183.5

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      |+.+.+++++||||+|+||.+++++|+++|++|++++|++++..+..+++...   .+++++++|+++.+++..+++++.
T Consensus         1 m~~~~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~---~~~~~~~~D~~~~~~~~~~~~~~~   77 (237)
T PRK07326          1 MMSLKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNK---GNVLGLAADVRDEADVQRAVDAIV   77 (237)
T ss_pred             CCCCCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhcc---CcEEEEEccCCCHHHHHHHHHHHH
Confidence            35578999999999999999999999999999999999998888777776543   578999999999999999999998


Q ss_pred             hcCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcc
Q 019722          110 SLNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMI  187 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~  187 (336)
                      +.++++|++|||+|.....  .+.+.+++++++++|+.+++.+++++++.+.+.      .++||++||..+..+     
T Consensus        78 ~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~------~~~iv~~ss~~~~~~-----  146 (237)
T PRK07326         78 AAFGGLDVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRG------GGYIINISSLAGTNF-----  146 (237)
T ss_pred             HHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHHC------CeEEEEECChhhccC-----
Confidence            8889999999999976432  456788899999999999999999999998432      479999999876543     


Q ss_pred             cccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHHHHHHHHhhcCC
Q 019722          188 RYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSKLLKT  267 (336)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~  267 (336)
                                  ......|+.+|++++.+++.++.++...|  +++++|+||++.|++........        .....+
T Consensus       147 ------------~~~~~~y~~sk~a~~~~~~~~~~~~~~~g--i~v~~v~pg~~~t~~~~~~~~~~--------~~~~~~  204 (237)
T PRK07326        147 ------------FAGGAAYNASKFGLVGFSEAAMLDLRQYG--IKVSTIMPGSVATHFNGHTPSEK--------DAWKIQ  204 (237)
T ss_pred             ------------CCCCchHHHHHHHHHHHHHHHHHHhcccC--cEEEEEeeccccCcccccccchh--------hhccCC
Confidence                        44566799999999999999999998877  99999999999999765532110        111357


Q ss_pred             hHHHHHHHHHHHhcCc
Q 019722          268 IPQGAATTCYVAIHPR  283 (336)
Q Consensus       268 ~~~~a~~~~~l~~~~~  283 (336)
                      +++++..+++++..+.
T Consensus       205 ~~d~a~~~~~~l~~~~  220 (237)
T PRK07326        205 PEDIAQLVLDLLKMPP  220 (237)
T ss_pred             HHHHHHHHHHHHhCCc
Confidence            8999999999998654

>COG0623 FabI Enoyl-[acyl-carrier-protein]

Probab=99.97  E-value=7.9e-29  Score=207.70  Aligned_cols=242  Identities=17%  Similarity=0.155  Sum_probs=205.7

Q ss_pred             CCCCCCCEEEEeCCC--ChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGAT--SGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQ  107 (336)
Q Consensus        30 ~~~l~gk~~lItGgs--~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~  107 (336)
                      +..|+||++||+|-.  ..|++.||+.|.++|+++.+++.++ ++++-.+++.+..  ....+++||+++.+++++++++
T Consensus         1 ~g~L~GK~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e-~l~krv~~la~~~--~s~~v~~cDV~~d~~i~~~f~~   77 (259)
T COG0623           1 MGLLEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGE-RLEKRVEELAEEL--GSDLVLPCDVTNDESIDALFAT   77 (259)
T ss_pred             CCccCCceEEEEEecccccHHHHHHHHHHHcCCEEEEEeccH-HHHHHHHHHHhhc--cCCeEEecCCCCHHHHHHHHHH
Confidence            357899999999986  6999999999999999999999987 5666666666552  3478899999999999999999


Q ss_pred             HHhcCCCccEEEEcccCCCCC------CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCcccc
Q 019722          108 FHSLNLPLNLLINNAGKFAHQ------HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSW  181 (336)
Q Consensus       108 ~~~~~~~id~lv~nAg~~~~~------~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~  181 (336)
                      +.+++|++|.|||+-++.+..      .+.+.+++...+++..++...+.|++.|.|..       +|+||.++-..+..
T Consensus        78 i~~~~g~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~~-------ggSiltLtYlgs~r  150 (259)
T COG0623          78 IKKKWGKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLMNN-------GGSILTLTYLGSER  150 (259)
T ss_pred             HHHhhCcccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcCC-------CCcEEEEEecccee
Confidence            999999999999999987642      45788999999999999999999999999976       58999999888776


Q ss_pred             ccCCcccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchh---HHHHHH
Q 019722          182 FSGDMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGF---ITDLVF  258 (336)
Q Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~---~~~~~~  258 (336)
                      .                 .|.+..-+.+|++++.-+|.||.+++++|  ||||+|+-|+++|--...+..+   ......
T Consensus       151 ~-----------------vPnYNvMGvAKAaLEasvRyLA~dlG~~g--IRVNaISAGPIrTLAasgI~~f~~~l~~~e~  211 (259)
T COG0623         151 V-----------------VPNYNVMGVAKAALEASVRYLAADLGKEG--IRVNAISAGPIRTLAASGIGDFRKMLKENEA  211 (259)
T ss_pred             e-----------------cCCCchhHHHHHHHHHHHHHHHHHhCccC--eEEeeecccchHHHHhhccccHHHHHHHHHh
Confidence            6                 56666789999999999999999999998  9999999999999877766443   222223


Q ss_pred             HHHHhhcCChHHHHHHHHHHHhcCccccCCceeeccCcccccc
Q 019722          259 FLTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWTS  301 (336)
Q Consensus       259 ~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~~  301 (336)
                      ..+.++..++||+..+.+||++ +.++.+||+.+-+|.+....
T Consensus       212 ~aPl~r~vt~eeVG~tA~fLlS-dLssgiTGei~yVD~G~~i~  253 (259)
T COG0623         212 NAPLRRNVTIEEVGNTAAFLLS-DLSSGITGEIIYVDSGYHIM  253 (259)
T ss_pred             hCCccCCCCHHHhhhhHHHHhc-chhcccccceEEEcCCceee
Confidence            3455666789999999999998 99999999988888775443

>PRK07578 short chain dehydrogenase; Provisional

Probab=99.97  E-value=6.2e-29  Score=213.90  Aligned_cols=195  Identities=16%  Similarity=0.189  Sum_probs=161.9

Q ss_pred             EEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCCCcc
Q 019722           37 TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLPLN  116 (336)
Q Consensus        37 ~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id  116 (336)
                      +++||||++|||++++++|+++ ++|++++|+..                   .++||+++++++++++++    ++++|
T Consensus         2 ~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~-------------------~~~~D~~~~~~~~~~~~~----~~~id   57 (199)
T PRK07578          2 KILVIGASGTIGRAVVAELSKR-HEVITAGRSSG-------------------DVQVDITDPASIRALFEK----VGKVD   57 (199)
T ss_pred             eEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC-------------------ceEecCCChHHHHHHHHh----cCCCC
Confidence            6999999999999999999999 99999998742                   368999999999998875    46899


Q ss_pred             EEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccccccccc
Q 019722          117 LLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQIS  194 (336)
Q Consensus       117 ~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~~~~  194 (336)
                      ++|||||.....  .+.+.++|++.+++|+.+++.+++++.|+|.+       .++|+++||..+..+            
T Consensus        58 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-------~g~iv~iss~~~~~~------------  118 (199)
T PRK07578         58 AVVSAAGKVHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLND-------GGSFTLTSGILSDEP------------  118 (199)
T ss_pred             EEEECCCCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc-------CCeEEEEcccccCCC------------
Confidence            999999975432  45678899999999999999999999999965       379999999877654            


Q ss_pred             CCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHHHHHHHHhhcCChHHHHHH
Q 019722          195 RNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSKLLKTIPQGAAT  274 (336)
Q Consensus       195 ~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~  274 (336)
                           .+....|+++|+++++|+++++.|+ +.|  |+||+|+||++.|++....        ..++.....++++++..
T Consensus       119 -----~~~~~~Y~~sK~a~~~~~~~la~e~-~~g--i~v~~i~Pg~v~t~~~~~~--------~~~~~~~~~~~~~~a~~  182 (199)
T PRK07578        119 -----IPGGASAATVNGALEGFVKAAALEL-PRG--IRINVVSPTVLTESLEKYG--------PFFPGFEPVPAARVALA  182 (199)
T ss_pred             -----CCCchHHHHHHHHHHHHHHHHHHHc-cCC--eEEEEEcCCcccCchhhhh--------hcCCCCCCCCHHHHHHH
Confidence                 5677889999999999999999999 766  9999999999999874221        11122334678999999


Q ss_pred             HHHHHhcCccccCCceeecc
Q 019722          275 TCYVAIHPRLVNVSGKYFAD  294 (336)
Q Consensus       275 ~~~l~~~~~~~~~~G~~~~~  294 (336)
                      ++.++.    ...+|+.|..
T Consensus       183 ~~~~~~----~~~~g~~~~~  198 (199)
T PRK07578        183 YVRSVE----GAQTGEVYKV  198 (199)
T ss_pred             HHHHhc----cceeeEEecc
Confidence            888886    3468887753

>PRK06101 short chain dehydrogenase; Provisional

Probab=99.97  E-value=9.3e-29  Score=219.05  Aligned_cols=202  Identities=25%  Similarity=0.272  Sum_probs=167.8

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCCCc
Q 019722           36 VTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLPL  115 (336)
Q Consensus        36 k~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i  115 (336)
                      ++++||||++|||++++++|+++|++|++++|+.+.+++..+.      ..++.++++|++++++++++++++..   .+
T Consensus         2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~------~~~~~~~~~D~~~~~~~~~~~~~~~~---~~   72 (240)
T PRK06101          2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHTQ------SANIFTLAFDVTDHPGTKAALSQLPF---IP   72 (240)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHh------cCCCeEEEeeCCCHHHHHHHHHhccc---CC
Confidence            7899999999999999999999999999999998766544332      34688999999999999999987643   47


Q ss_pred             cEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcccccccc
Q 019722          116 NLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQI  193 (336)
Q Consensus       116 d~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~~~  193 (336)
                      |++|+|||.....  .+.+.++|++++++|+.+++.+++++.|.|.+       ++++|++||..+..+           
T Consensus        73 d~~i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-------~~~iv~isS~~~~~~-----------  134 (240)
T PRK06101         73 ELWIFNAGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSC-------GHRVVIVGSIASELA-----------  134 (240)
T ss_pred             CEEEEcCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhc-------CCeEEEEechhhccC-----------
Confidence            9999999965322  34677889999999999999999999999854       368999999877765           


Q ss_pred             cCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHHHHHHHHhhcCChHHHHH
Q 019722          194 SRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSKLLKTIPQGAA  273 (336)
Q Consensus       194 ~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~  273 (336)
                            .+....|+++|++++++++.++.|+...|  |++++|+||++.|++......         ......++++.+.
T Consensus       135 ------~~~~~~Y~asK~a~~~~~~~l~~e~~~~g--i~v~~v~pg~i~t~~~~~~~~---------~~~~~~~~~~~a~  197 (240)
T PRK06101        135 ------LPRAEAYGASKAAVAYFARTLQLDLRPKG--IEVVTVFPGFVATPLTDKNTF---------AMPMIITVEQASQ  197 (240)
T ss_pred             ------CCCCchhhHHHHHHHHHHHHHHHHHHhcC--ceEEEEeCCcCCCCCcCCCCC---------CCCcccCHHHHHH
Confidence                  55667899999999999999999999877  999999999999998765211         0112357888999


Q ss_pred             HHHHHHhc
Q 019722          274 TTCYVAIH  281 (336)
Q Consensus       274 ~~~~l~~~  281 (336)
                      .++..+..
T Consensus       198 ~i~~~i~~  205 (240)
T PRK06101        198 EIRAQLAR  205 (240)
T ss_pred             HHHHHHhc
Confidence            99888864

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=99.97  E-value=3.5e-28  Score=214.60  Aligned_cols=233  Identities=29%  Similarity=0.382  Sum_probs=188.6

Q ss_pred             EEEeCCCChHHHHHHHHHHHCCCEEEEeeCCh-HHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCCCcc
Q 019722           38 AIITGATSGIGAETARVLAKRGARLVLPARSL-KAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLPLN  116 (336)
Q Consensus        38 ~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~-~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id  116 (336)
                      +||||++++||.+++++|+++|++|++++|+. +..+...+.++..  +.++.++++|++++++++++++.+.+.++++|
T Consensus         1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   78 (239)
T TIGR01830         1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAY--GVKALGVVCDVSDREDVKAVVEEIEEELGPID   78 (239)
T ss_pred             CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHHHHHhCCCC
Confidence            58999999999999999999999999999875 4444555555443  45789999999999999999999988889999


Q ss_pred             EEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccccccccc
Q 019722          117 LLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQIS  194 (336)
Q Consensus       117 ~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~~~~  194 (336)
                      ++|||||.....  .+.+.+.+++.+++|+.+.+.+++.+.+.+.+.+     .+++|++||.++..+            
T Consensus        79 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-----~~~~v~~sS~~~~~g------------  141 (239)
T TIGR01830        79 ILVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQR-----SGRIINISSVVGLMG------------  141 (239)
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-----CeEEEEECCccccCC------------
Confidence            999999976432  4556788999999999999999999999987654     479999999877765            


Q ss_pred             CCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHH-HHHHHHHHhhcCChHHHHH
Q 019722          195 RNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFIT-DLVFFLTSKLLKTIPQGAA  273 (336)
Q Consensus       195 ~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~-~~~~~~~~~~~~~~~~~a~  273 (336)
                           .+....|+.+|++++.+++.++.++...|  ++++.++||++.|++......... ......+.....++++++.
T Consensus       142 -----~~~~~~y~~~k~a~~~~~~~l~~~~~~~g--~~~~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~  214 (239)
T TIGR01830       142 -----NAGQANYAASKAGVIGFTKSLAKELASRN--ITVNAVAPGFIDTDMTDKLSEKVKKKILSQIPLGRFGTPEEVAN  214 (239)
T ss_pred             -----CCCCchhHHHHHHHHHHHHHHHHHHhhcC--eEEEEEEECCCCChhhhhcChHHHHHHHhcCCcCCCcCHHHHHH
Confidence                 45667899999999999999999998877  999999999999987655432211 1112222334568899999


Q ss_pred             HHHHHHhcCccccCCceeeccCcc
Q 019722          274 TTCYVAIHPRLVNVSGKYFADCNE  297 (336)
Q Consensus       274 ~~~~l~~~~~~~~~~G~~~~~~~~  297 (336)
                      .+++++. +...+.+|++++.+++
T Consensus       215 ~~~~~~~-~~~~~~~g~~~~~~~g  237 (239)
T TIGR01830       215 AVAFLAS-DEASYITGQVIHVDGG  237 (239)
T ss_pred             HHHHHhC-cccCCcCCCEEEeCCC
Confidence            9998886 4456789998887654

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>PRK07023 short chain dehydrogenase; Provisional

Probab=99.96  E-value=1.6e-28  Score=217.81  Aligned_cols=217  Identities=24%  Similarity=0.285  Sum_probs=170.6

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHH-HHhcC--
Q 019722           36 VTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQ-FHSLN--  112 (336)
Q Consensus        36 k~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~-~~~~~--  112 (336)
                      +++|||||++|||++++++|+++|++|++++|+..+.  .   ..  ..+.++.++++|+++++++++++++ +.+.+  
T Consensus         2 ~~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~~--~---~~--~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   74 (243)
T PRK07023          2 VRAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPS--L---AA--AAGERLAEVELDLSDAAAAAAWLAGDLLAAFVD   74 (243)
T ss_pred             ceEEEecCCcchHHHHHHHHHhCCCEEEEEecCcchh--h---hh--ccCCeEEEEEeccCCHHHHHHHHHHHHHHHhcc
Confidence            3799999999999999999999999999999986532  1   11  1245789999999999999998776 54433  


Q ss_pred             -CCccEEEEcccCCCC---CCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccc
Q 019722          113 -LPLNLLINNAGKFAH---QHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIR  188 (336)
Q Consensus       113 -~~id~lv~nAg~~~~---~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~  188 (336)
                       +++|++|||||....   ..+.+.+++++.+++|+.+++.+++.+.+.+.++.     .++||++||..+..+      
T Consensus        75 ~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-----~~~iv~isS~~~~~~------  143 (243)
T PRK07023         75 GASRVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAA-----ERRILHISSGAARNA------  143 (243)
T ss_pred             CCCceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccC-----CCEEEEEeChhhcCC------
Confidence             479999999997643   24567889999999999999999999999998754     479999999876554      


Q ss_pred             ccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccch-------hHHHHHHHHH
Q 019722          189 YLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREG-------FITDLVFFLT  261 (336)
Q Consensus       189 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~-------~~~~~~~~~~  261 (336)
                                 .+++..|+++|++++.+++.++.+ .+.+  |++++|+||+++|++......       .........+
T Consensus       144 -----------~~~~~~Y~~sK~a~~~~~~~~~~~-~~~~--i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~  209 (243)
T PRK07023        144 -----------YAGWSVYCATKAALDHHARAVALD-ANRA--LRIVSLAPGVVDTGMQATIRATDEERFPMRERFRELKA  209 (243)
T ss_pred             -----------CCCchHHHHHHHHHHHHHHHHHhc-CCCC--cEEEEecCCccccHHHHHHHhcccccchHHHHHHHhhh
Confidence                       567788999999999999999999 6656  999999999999997543210       1111222233


Q ss_pred             HhhcCChHHHHHHHHHHHhcCcc
Q 019722          262 SKLLKTIPQGAATTCYVAIHPRL  284 (336)
Q Consensus       262 ~~~~~~~~~~a~~~~~l~~~~~~  284 (336)
                      ......|+++|..++.++.++..
T Consensus       210 ~~~~~~~~~va~~~~~~l~~~~~  232 (243)
T PRK07023        210 SGALSTPEDAARRLIAYLLSDDF  232 (243)
T ss_pred             cCCCCCHHHHHHHHHHHHhcccc
Confidence            34567899999977666665653

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.96  E-value=1.9e-29  Score=208.61  Aligned_cols=182  Identities=26%  Similarity=0.310  Sum_probs=163.3

Q ss_pred             CCEEEEeCCC-ChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHh-cC
Q 019722           35 SVTAIITGAT-SGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHS-LN  112 (336)
Q Consensus        35 gk~~lItGgs-~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~-~~  112 (336)
                      -|.++|||++ ||||.+++++|++.|+.|+.++|+.+...++...       .++...+.|+++++++..+..++++ .+
T Consensus         7 ~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~-------~gl~~~kLDV~~~~~V~~v~~evr~~~~   79 (289)
T KOG1209|consen    7 PKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQ-------FGLKPYKLDVSKPEEVVTVSGEVRANPD   79 (289)
T ss_pred             CCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHh-------hCCeeEEeccCChHHHHHHHHHHhhCCC
Confidence            3778888886 8999999999999999999999998877665532       4689999999999999999999987 78


Q ss_pred             CCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccccc
Q 019722          113 LPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYL  190 (336)
Q Consensus       113 ~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~  190 (336)
                      |++|+|+||||..-..  .+.+.+..++.|.+|++|.+..+|++...+.+.      +|.|||++|.++..+        
T Consensus        80 Gkld~L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~lika------KGtIVnvgSl~~~vp--------  145 (289)
T KOG1209|consen   80 GKLDLLYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKA------KGTIVNVGSLAGVVP--------  145 (289)
T ss_pred             CceEEEEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHc------cceEEEecceeEEec--------
Confidence            9999999999965433  677888999999999999999999999777666      499999999998877        


Q ss_pred             ccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCc
Q 019722          191 GQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRE  248 (336)
Q Consensus       191 ~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~  248 (336)
                               ++....|.+||+|++.+++.|+.|+++.|  |+|..+.||.|.|++...
T Consensus       146 ---------fpf~~iYsAsKAAihay~~tLrlEl~PFg--v~Vin~itGGv~T~Ia~k  192 (289)
T KOG1209|consen  146 ---------FPFGSIYSASKAAIHAYARTLRLELKPFG--VRVINAITGGVATDIADK  192 (289)
T ss_pred             ---------cchhhhhhHHHHHHHHhhhhcEEeeeccc--cEEEEecccceecccccC
Confidence                     88888999999999999999999999999  999999999999998776

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=99.96  E-value=7.3e-29  Score=217.98  Aligned_cols=190  Identities=27%  Similarity=0.361  Sum_probs=169.0

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHH-HHHHHHHHhc
Q 019722           33 LSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSV-RNFVSQFHSL  111 (336)
Q Consensus        33 l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v-~~~~~~~~~~  111 (336)
                      -.|++++|||||.|||++.|++||++|++|++++|++++++.+.+++.++++ ..+.++.+|.++.+.+ +++.+.+.. 
T Consensus        47 ~~g~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~-vev~~i~~Dft~~~~~ye~i~~~l~~-  124 (312)
T KOG1014|consen   47 KLGSWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYK-VEVRIIAIDFTKGDEVYEKLLEKLAG-  124 (312)
T ss_pred             hcCCEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhC-cEEEEEEEecCCCchhHHHHHHHhcC-
Confidence            3459999999999999999999999999999999999999999999999985 8999999999998874 333333333 


Q ss_pred             CCCccEEEEcccCCCCC----CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcc
Q 019722          112 NLPLNLLINNAGKFAHQ----HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMI  187 (336)
Q Consensus       112 ~~~id~lv~nAg~~~~~----~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~  187 (336)
                       ..|-+||||+|.....    .+.+.+.+++.+++|+.+...+++.++|.|.+++     .|-|||++|.++..+     
T Consensus       125 -~~VgILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~-----~G~IvnigS~ag~~p-----  193 (312)
T KOG1014|consen  125 -LDVGILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERK-----KGIIVNIGSFAGLIP-----  193 (312)
T ss_pred             -CceEEEEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCC-----CceEEEecccccccc-----
Confidence             2688999999987632    4455568889999999999999999999999876     599999999999887     


Q ss_pred             cccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCcc
Q 019722          188 RYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRER  249 (336)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~  249 (336)
                                  .|.+..|+++|+.+..++++|..|+..+|  |.|-+|.|.+|.|.|....
T Consensus       194 ------------~p~~s~ysasK~~v~~~S~~L~~Ey~~~g--I~Vq~v~p~~VaTkm~~~~  241 (312)
T KOG1014|consen  194 ------------TPLLSVYSASKAFVDFFSRCLQKEYESKG--IFVQSVIPYLVATKMAKYR  241 (312)
T ss_pred             ------------ChhHHHHHHHHHHHHHHHHHHHHHHHhcC--eEEEEeehhheeccccccC
Confidence                        88999999999999999999999999998  9999999999999998774

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=99.96  E-value=2.9e-28  Score=203.57  Aligned_cols=161  Identities=40%  Similarity=0.532  Sum_probs=146.0

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCC--hHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcC
Q 019722           36 VTAIITGATSGIGAETARVLAKRGA-RLVLPARS--LKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLN  112 (336)
Q Consensus        36 k~~lItGgs~gIG~aia~~L~~~G~-~V~~~~r~--~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  112 (336)
                      |++|||||++|||++++++|+++|. +|++++|+  .+..++..+++...  +.++.++++|++++++++++++++.+.+
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~   78 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAP--GAKITFIECDLSDPESIRALIEEVIKRF   78 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHT--TSEEEEEESETTSHHHHHHHHHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccc--cccccccccccccccccccccccccccc
Confidence            7999999999999999999999976 88899999  67778888888755  5899999999999999999999999889


Q ss_pred             CCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccccc
Q 019722          113 LPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYL  190 (336)
Q Consensus       113 ~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~  190 (336)
                      +++|++|||||.....  .+.+.++|++++++|+.+++.+.|+++|   +.      .++||++||..+..+        
T Consensus        79 ~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~---~~------~g~iv~~sS~~~~~~--------  141 (167)
T PF00106_consen   79 GPLDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLP---QG------GGKIVNISSIAGVRG--------  141 (167)
T ss_dssp             SSESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHH---HT------TEEEEEEEEGGGTSS--------
T ss_pred             ccccccccccccccccccccccchhhhhccccccceeeeeeehhee---cc------ccceEEecchhhccC--------
Confidence            9999999999987743  5667899999999999999999999999   22      489999999998887        


Q ss_pred             ccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHH
Q 019722          191 GQISRNKSHYDATRAYALSKLANVLHTKELAQRL  224 (336)
Q Consensus       191 ~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~  224 (336)
                               .+.+..|+++|+++.+|++++++|+
T Consensus       142 ---------~~~~~~Y~askaal~~~~~~la~e~  166 (167)
T PF00106_consen  142 ---------SPGMSAYSASKAALRGLTQSLAAEL  166 (167)
T ss_dssp             ---------STTBHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ---------CCCChhHHHHHHHHHHHHHHHHHhc
Confidence                     7888899999999999999999986

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>PRK08177 short chain dehydrogenase; Provisional

Probab=99.96  E-value=1.3e-27  Score=209.70  Aligned_cols=200  Identities=23%  Similarity=0.252  Sum_probs=162.5

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCCCc
Q 019722           36 VTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLPL  115 (336)
Q Consensus        36 k~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i  115 (336)
                      |+++||||++|||.+++++|+++|++|++++|+++..+++. +      ..++.++.+|++|+++++++++.+..  +++
T Consensus         2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~-~------~~~~~~~~~D~~d~~~~~~~~~~~~~--~~i   72 (225)
T PRK08177          2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQ-A------LPGVHIEKLDMNDPASLDQLLQRLQG--QRF   72 (225)
T ss_pred             CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHHH-h------ccccceEEcCCCCHHHHHHHHHHhhc--CCC
Confidence            78999999999999999999999999999999987654331 1      13577889999999999999998854  479


Q ss_pred             cEEEEcccCCCC----CCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcccccc
Q 019722          116 NLLINNAGKFAH----QHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLG  191 (336)
Q Consensus       116 d~lv~nAg~~~~----~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~  191 (336)
                      |++|||||....    ..+.+.+++++.+++|+.+++.++++++|.+++.      .++++++||..+..+...      
T Consensus        73 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~------~~~iv~~ss~~g~~~~~~------  140 (225)
T PRK08177         73 DLLFVNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPG------QGVLAFMSSQLGSVELPD------  140 (225)
T ss_pred             CEEEEcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhc------CCEEEEEccCccccccCC------
Confidence            999999997643    2456778899999999999999999999998753      379999999766543110      


Q ss_pred             cccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHHHHHHHHhhcCChHHH
Q 019722          192 QISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSKLLKTIPQG  271 (336)
Q Consensus       192 ~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~  271 (336)
                              ...+..|+++|++++.+++.++.++.+.+  |+||+|+||+++|++.....              ..++++.
T Consensus       141 --------~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~--i~v~~i~PG~i~t~~~~~~~--------------~~~~~~~  196 (225)
T PRK08177        141 --------GGEMPLYKASKAALNSMTRSFVAELGEPT--LTVLSMHPGWVKTDMGGDNA--------------PLDVETS  196 (225)
T ss_pred             --------CCCccchHHHHHHHHHHHHHHHHHhhcCC--eEEEEEcCCceecCCCCCCC--------------CCCHHHH
Confidence                    23456799999999999999999999877  99999999999999976421              1345666


Q ss_pred             HHHHHHHHh
Q 019722          272 AATTCYVAI  280 (336)
Q Consensus       272 a~~~~~l~~  280 (336)
                      +..++..+.
T Consensus       197 ~~~~~~~~~  205 (225)
T PRK08177        197 VKGLVEQIE  205 (225)
T ss_pred             HHHHHHHHH
Confidence            777666664

>PRK09291 short chain dehydrogenase; Provisional

Probab=99.96  E-value=7.5e-27  Score=208.58  Aligned_cols=216  Identities=25%  Similarity=0.229  Sum_probs=169.8

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCCC
Q 019722           35 SVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLP  114 (336)
Q Consensus        35 gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  114 (336)
                      +|++|||||++|||++++++|+++|++|++++|+.....+..+.....  +.++.++++|+++++++..+++      ++
T Consensus         2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~------~~   73 (257)
T PRK09291          2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARR--GLALRVEKLDLTDAIDRAQAAE------WD   73 (257)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcceEEEeeCCCHHHHHHHhc------CC
Confidence            589999999999999999999999999999999987776665554433  4568999999999998877653      37


Q ss_pred             ccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccccccc
Q 019722          115 LNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQ  192 (336)
Q Consensus       115 id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~~  192 (336)
                      +|+||||||.....  .+.+.+++++.+++|+.+++.+++.+++.+.+.+     .++||++||..+..+          
T Consensus        74 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-----~~~iv~~SS~~~~~~----------  138 (257)
T PRK09291         74 VDVLLNNAGIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARG-----KGKVVFTSSMAGLIT----------  138 (257)
T ss_pred             CCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-----CceEEEEcChhhccC----------
Confidence            99999999976543  5677889999999999999999999999998765     479999999876654          


Q ss_pred             ccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHH----HHHHHH------H
Q 019722          193 ISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITD----LVFFLT------S  262 (336)
Q Consensus       193 ~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~----~~~~~~------~  262 (336)
                             .+....|+++|++++.+++.++.++.+.|  |++++|+||++.|++..........    ....+.      .
T Consensus       139 -------~~~~~~Y~~sK~a~~~~~~~l~~~~~~~g--i~~~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  209 (257)
T PRK09291        139 -------GPFTGAYCASKHALEAIAEAMHAELKPFG--IQVATVNPGPYLTGFNDTMAETPKRWYDPARNFTDPEDLAFP  209 (257)
T ss_pred             -------CCCcchhHHHHHHHHHHHHHHHHHHHhcC--cEEEEEecCcccccchhhhhhhhhhhcchhhHHHhhhhhhcc
Confidence                   44566899999999999999999998877  9999999999999876532211100    000000      1


Q ss_pred             hhcCChHHHHHHHHHHHhcC
Q 019722          263 KLLKTIPQGAATTCYVAIHP  282 (336)
Q Consensus       263 ~~~~~~~~~a~~~~~l~~~~  282 (336)
                      ....++++.+..++.++..+
T Consensus       210 ~~~~~~~~~~~~~~~~l~~~  229 (257)
T PRK09291        210 LEQFDPQEMIDAMVEVIPAD  229 (257)
T ss_pred             ccCCCHHHHHHHHHHHhcCC
Confidence            11246777788888777533

>PRK08264 short chain dehydrogenase; Validated

Probab=99.96  E-value=1e-26  Score=205.42  Aligned_cols=202  Identities=25%  Similarity=0.323  Sum_probs=171.0

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGA-RLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQF  108 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~  108 (336)
                      ++++.+++++||||+|+||++++++|+++|+ +|++++|+.++.++         .+.++.++.+|+++.+++.++++. 
T Consensus         1 ~~~~~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~---------~~~~~~~~~~D~~~~~~~~~~~~~-   70 (238)
T PRK08264          1 MMDIKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD---------LGPRVVPLQLDVTDPASVAAAAEA-   70 (238)
T ss_pred             CCCCCCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh---------cCCceEEEEecCCCHHHHHHHHHh-
Confidence            4678899999999999999999999999999 99999999876543         145799999999999999887765 


Q ss_pred             HhcCCCccEEEEcccCCCC---CCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCC
Q 019722          109 HSLNLPLNLLINNAGKFAH---QHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGD  185 (336)
Q Consensus       109 ~~~~~~id~lv~nAg~~~~---~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~  185 (336)
                         ++++|++|||||....   ..+.+.+++++.+++|+.+++.+++++.|.+++.+     .+++|++||..+..+   
T Consensus        71 ---~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-----~~~~v~~sS~~~~~~---  139 (238)
T PRK08264         71 ---ASDVTILVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANG-----GGAIVNVLSVLSWVN---  139 (238)
T ss_pred             ---cCCCCEEEECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-----CCEEEEEcChhhccC---
Confidence               4579999999998332   25667889999999999999999999999998764     479999999876554   


Q ss_pred             cccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHHHHHHHHhhc
Q 019722          186 MIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSKLL  265 (336)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~  265 (336)
                                    .++...|+.+|++++.+++.++.++.+.+  |++++++||.++|++......            ..
T Consensus       140 --------------~~~~~~y~~sK~a~~~~~~~l~~~~~~~~--i~~~~v~pg~v~t~~~~~~~~------------~~  191 (238)
T PRK08264        140 --------------FPNLGTYSASKAAAWSLTQALRAELAPQG--TRVLGVHPGPIDTDMAAGLDA------------PK  191 (238)
T ss_pred             --------------CCCchHhHHHHHHHHHHHHHHHHHhhhcC--eEEEEEeCCcccccccccCCc------------CC
Confidence                          56677899999999999999999998877  999999999999998654321            14


Q ss_pred             CChHHHHHHHHHHHh
Q 019722          266 KTIPQGAATTCYVAI  280 (336)
Q Consensus       266 ~~~~~~a~~~~~l~~  280 (336)
                      .++++++..++..+.
T Consensus       192 ~~~~~~a~~~~~~~~  206 (238)
T PRK08264        192 ASPADVARQILDALE  206 (238)
T ss_pred             CCHHHHHHHHHHHHh
Confidence            667888888888776

>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.95  E-value=8.1e-27  Score=204.70  Aligned_cols=222  Identities=24%  Similarity=0.216  Sum_probs=191.2

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCCCc
Q 019722           36 VTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLPL  115 (336)
Q Consensus        36 k~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i  115 (336)
                      +.++||||++|||++++.++..+|++|.++.|+.+++.++.++++-.+....+.+..+|+.+.+++..+++++.+.++.+
T Consensus        34 ~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~~~~  113 (331)
T KOG1210|consen   34 RHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLEGPI  113 (331)
T ss_pred             ceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhccCCc
Confidence            78999999999999999999999999999999999999999988776544458899999999999999999999999999


Q ss_pred             cEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcccccccc
Q 019722          116 NLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQI  193 (336)
Q Consensus       116 d~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~~~  193 (336)
                      |.+|+|||...+.  .+.+.+.++..+++|+.+++.++++.++.|++...    .|+|+.+||.++..+           
T Consensus       114 d~l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~----~g~I~~vsS~~a~~~-----------  178 (331)
T KOG1210|consen  114 DNLFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREH----LGRIILVSSQLAMLG-----------  178 (331)
T ss_pred             ceEEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhcccc----CcEEEEehhhhhhcC-----------
Confidence            9999999976654  78899999999999999999999999999988642    369999999999987           


Q ss_pred             cCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHHHHHHHH-hhcCChHHHH
Q 019722          194 SRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTS-KLLKTIPQGA  272 (336)
Q Consensus       194 ~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~-~~~~~~~~~a  272 (336)
                            ..++.+|+++|+|+.+|+..+++|+...|  |+|....|+.+.||.+.+.....+.....+.. .....+|+.|
T Consensus       179 ------i~GysaYs~sK~alrgLa~~l~qE~i~~~--v~Vt~~~P~~~~tpGfE~En~tkP~~t~ii~g~ss~~~~e~~a  250 (331)
T KOG1210|consen  179 ------IYGYSAYSPSKFALRGLAEALRQELIKYG--VHVTLYYPPDTLTPGFERENKTKPEETKIIEGGSSVIKCEEMA  250 (331)
T ss_pred             ------cccccccccHHHHHHHHHHHHHHHHhhcc--eEEEEEcCCCCCCCccccccccCchheeeecCCCCCcCHHHHH
Confidence                  78899999999999999999999999988  99999999999999877754333333322221 1224567777


Q ss_pred             HHHHHHHh
Q 019722          273 ATTCYVAI  280 (336)
Q Consensus       273 ~~~~~l~~  280 (336)
                      .+++.=+.
T Consensus       251 ~~~~~~~~  258 (331)
T KOG1210|consen  251 KAIVKGMK  258 (331)
T ss_pred             HHHHhHHh
Confidence            77776665

>PRK06953 short chain dehydrogenase; Provisional

Probab=99.95  E-value=4.1e-26  Score=199.72  Aligned_cols=213  Identities=23%  Similarity=0.272  Sum_probs=169.1

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCCCc
Q 019722           36 VTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLPL  115 (336)
Q Consensus        36 k~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i  115 (336)
                      |+++||||+++||++++++|+++|++|++++|+.+..+++.    .    ..+.++++|+++.++++++++++..  +++
T Consensus         2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~~----~----~~~~~~~~D~~~~~~v~~~~~~~~~--~~~   71 (222)
T PRK06953          2 KTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAALQ----A----LGAEALALDVADPASVAGLAWKLDG--EAL   71 (222)
T ss_pred             ceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHHH----h----ccceEEEecCCCHHHHHHHHHHhcC--CCC
Confidence            68999999999999999999999999999999977655432    1    2356899999999999998877643  479


Q ss_pred             cEEEEcccCCCCC----CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcccccc
Q 019722          116 NLLINNAGKFAHQ----HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLG  191 (336)
Q Consensus       116 d~lv~nAg~~~~~----~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~  191 (336)
                      |++|||+|.....    .+.+.++++..+++|+.+++.+++++.|+|.+.      .+++|+++|..+..+...      
T Consensus        72 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~------~g~iv~isS~~~~~~~~~------  139 (222)
T PRK06953         72 DAAVYVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAA------GGVLAVLSSRMGSIGDAT------  139 (222)
T ss_pred             CEEEECCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhcc------CCeEEEEcCccccccccc------
Confidence            9999999986321    355788999999999999999999999998653      379999999876654210      


Q ss_pred             cccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHHHHHHHHhhcCChHHH
Q 019722          192 QISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSKLLKTIPQG  271 (336)
Q Consensus       192 ~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~  271 (336)
                              ......|+++|++++.+++.++.++.  +  ++||+|+||+++|++.+..              ....+++.
T Consensus       140 --------~~~~~~Y~~sK~a~~~~~~~~~~~~~--~--i~v~~v~Pg~i~t~~~~~~--------------~~~~~~~~  193 (222)
T PRK06953        140 --------GTTGWLYRASKAALNDALRAASLQAR--H--ATCIALHPGWVRTDMGGAQ--------------AALDPAQS  193 (222)
T ss_pred             --------CCCccccHHhHHHHHHHHHHHhhhcc--C--cEEEEECCCeeecCCCCCC--------------CCCCHHHH
Confidence                    11123699999999999999998853  4  9999999999999986641              12366778


Q ss_pred             HHHHHHHHhcCccccCCceeeccCcc
Q 019722          272 AATTCYVAIHPRLVNVSGKYFADCNE  297 (336)
Q Consensus       272 a~~~~~l~~~~~~~~~~G~~~~~~~~  297 (336)
                      +..++.++... ....+|.+|..++.
T Consensus       194 ~~~~~~~~~~~-~~~~~~~~~~~~~~  218 (222)
T PRK06953        194 VAGMRRVIAQA-TRRDNGRFFQYDGV  218 (222)
T ss_pred             HHHHHHHHHhc-CcccCceEEeeCCc
Confidence            88888887744 35668888876544

>PRK08017 oxidoreductase; Provisional

Probab=99.95  E-value=6.8e-26  Score=202.26  Aligned_cols=216  Identities=29%  Similarity=0.320  Sum_probs=174.1

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhc-CCC
Q 019722           36 VTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSL-NLP  114 (336)
Q Consensus        36 k~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~-~~~  114 (336)
                      |+++||||+|+||.++++.|+++|++|++++|+.++.+...    .    ..+..+++|+++.+++..+++.+... .++
T Consensus         3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~~----~----~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~   74 (256)
T PRK08017          3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARMN----S----LGFTGILLDLDDPESVERAADEVIALTDNR   74 (256)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHHH----h----CCCeEEEeecCCHHHHHHHHHHHHHhcCCC
Confidence            78999999999999999999999999999999987655432    1    24778999999999999999988764 368


Q ss_pred             ccEEEEcccCCCC--CCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccccccc
Q 019722          115 LNLLINNAGKFAH--QHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQ  192 (336)
Q Consensus       115 id~lv~nAg~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~~  192 (336)
                      +|.+|||+|....  ..+.+.+++++.+++|+.|++.+++.+++.+.+.+     .++||++||.++..+          
T Consensus        75 ~~~ii~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-----~~~iv~~ss~~~~~~----------  139 (256)
T PRK08017         75 LYGLFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHG-----EGRIVMTSSVMGLIS----------  139 (256)
T ss_pred             CeEEEECCCCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcC-----CCEEEEEcCcccccC----------
Confidence            9999999996543  24667888999999999999999999999998764     479999999876654          


Q ss_pred             ccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhH--HH-HHHHHHHhhcCChH
Q 019722          193 ISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFI--TD-LVFFLTSKLLKTIP  269 (336)
Q Consensus       193 ~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~--~~-~~~~~~~~~~~~~~  269 (336)
                             .+....|+++|++++.+++.++.++...+  ++++.|+||.+.|++........  .. ............++
T Consensus       140 -------~~~~~~Y~~sK~~~~~~~~~l~~~~~~~~--i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  210 (256)
T PRK08017        140 -------TPGRGAYAASKYALEAWSDALRMELRHSG--IKVSLIEPGPIRTRFTDNVNQTQSDKPVENPGIAARFTLGPE  210 (256)
T ss_pred             -------CCCccHHHHHHHHHHHHHHHHHHHHhhcC--CEEEEEeCCCcccchhhcccchhhccchhhhHHHhhcCCCHH
Confidence                   45567899999999999999999998877  99999999999999876532111  00 00111122346899


Q ss_pred             HHHHHHHHHHhcCc
Q 019722          270 QGAATTCYVAIHPR  283 (336)
Q Consensus       270 ~~a~~~~~l~~~~~  283 (336)
                      +.+..+..++..+.
T Consensus       211 d~a~~~~~~~~~~~  224 (256)
T PRK08017        211 AVVPKLRHALESPK  224 (256)
T ss_pred             HHHHHHHHHHhCCC
Confidence            99999999987443

>PRK12367 short chain dehydrogenase; Provisional

Probab=99.95  E-value=3.2e-26  Score=203.26  Aligned_cols=200  Identities=16%  Similarity=0.110  Sum_probs=148.2

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      ..+++||+++||||++|||++++++|+++|++|++++|+.....+   .. ..  . ...++.+|+++.+++..      
T Consensus         9 ~~~l~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~---~~-~~--~-~~~~~~~D~~~~~~~~~------   75 (245)
T PRK12367          9 QSTWQGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSE---SN-DE--S-PNEWIKWECGKEESLDK------   75 (245)
T ss_pred             HHhhCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhh---hh-cc--C-CCeEEEeeCCCHHHHHH------
Confidence            467899999999999999999999999999999999998632211   11 11  1 23678899999988764      


Q ss_pred             hcCCCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcccc
Q 019722          110 SLNLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRY  189 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~  189 (336)
                       .++++|++|||||+... .+.+.++|++++++|+.+++.++|+++|.|.+++.  ..++.+++.+|.++..        
T Consensus        76 -~~~~iDilVnnAG~~~~-~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~--~~g~~iiv~ss~a~~~--------  143 (245)
T PRK12367         76 -QLASLDVLILNHGINPG-GRQDPENINKALEINALSSWRLLELFEDIALNNNS--QIPKEIWVNTSEAEIQ--------  143 (245)
T ss_pred             -hcCCCCEEEECCccCCc-CCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccc--CCCeEEEEEecccccC--------
Confidence             34689999999997533 34578899999999999999999999999976310  0023344445544322        


Q ss_pred             cccccCCCCCCChhhHhHHHHHHHHHHHHHHHH----HHccCCCcEEEEEeeCCceeCCCCCccchhHHHHHHHHHHhhc
Q 019722          190 LGQISRNKSHYDATRAYALSKLANVLHTKELAQ----RLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSKLL  265 (336)
Q Consensus       190 ~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~----e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~  265 (336)
                                .+....|++||+++..+. ++++    |+...+  |+|+.++||+++|++...               ..
T Consensus       144 ----------~~~~~~Y~aSKaal~~~~-~l~~~l~~e~~~~~--i~v~~~~pg~~~t~~~~~---------------~~  195 (245)
T PRK12367        144 ----------PALSPSYEISKRLIGQLV-SLKKNLLDKNERKK--LIIRKLILGPFRSELNPI---------------GI  195 (245)
T ss_pred             ----------CCCCchhHHHHHHHHHHH-HHHHHHHHhhcccc--cEEEEecCCCcccccCcc---------------CC
Confidence                      223457999999986544 5555    445555  999999999999987321               13


Q ss_pred             CChHHHHHHHHHHHhcC
Q 019722          266 KTIPQGAATTCYVAIHP  282 (336)
Q Consensus       266 ~~~~~~a~~~~~l~~~~  282 (336)
                      .+|+++|..+++.+...
T Consensus       196 ~~~~~vA~~i~~~~~~~  212 (245)
T PRK12367        196 MSADFVAKQILDQANLG  212 (245)
T ss_pred             CCHHHHHHHHHHHHhcC
Confidence            57899999999998733

>KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.95  E-value=1.7e-27  Score=199.53  Aligned_cols=234  Identities=20%  Similarity=0.164  Sum_probs=184.3

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCC
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNL  113 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  113 (336)
                      .+|++|+||+|.|||..+++.+.+.+-.+...++++..++  .+.++-.++ ........|++...-+..+.+..++.++
T Consensus         5 ~r~villTGaSrgiG~~~v~~i~aed~e~~r~g~~r~~a~--~~~L~v~~g-d~~v~~~g~~~e~~~l~al~e~~r~k~g   81 (253)
T KOG1204|consen    5 MRKVILLTGASRGIGTGSVATILAEDDEALRYGVARLLAE--LEGLKVAYG-DDFVHVVGDITEEQLLGALREAPRKKGG   81 (253)
T ss_pred             cceEEEEecCCCCccHHHHHHHHhcchHHHHHhhhccccc--ccceEEEec-CCcceechHHHHHHHHHHHHhhhhhcCC
Confidence            4677899999999999999999988876666665554443  333333332 4555566788777778888888888899


Q ss_pred             CccEEEEcccCCCCC-----CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccc
Q 019722          114 PLNLLINNAGKFAHQ-----HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIR  188 (336)
Q Consensus       114 ~id~lv~nAg~~~~~-----~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~  188 (336)
                      ..|++|||||...+.     +..+.++|.+.+++|+++.+.|.+.++|.+++++.    .+.+||+||.++..+      
T Consensus        82 kr~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~----~~~vVnvSS~aav~p------  151 (253)
T KOG1204|consen   82 KRDIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPV----NGNVVNVSSLAAVRP------  151 (253)
T ss_pred             ceeEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCc----cCeEEEecchhhhcc------
Confidence            999999999987764     36678899999999999999999999999988732    489999999999887      


Q ss_pred             ccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccch---hHHHHHHHH----H
Q 019722          189 YLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREG---FITDLVFFL----T  261 (336)
Q Consensus       189 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~---~~~~~~~~~----~  261 (336)
                                 +.++..||++|+|.++|++.||.|-. ++  |+|.+++||.|+|+|.....+   ..+.....+    .
T Consensus       152 -----------~~~wa~yc~~KaAr~m~f~~lA~EEp-~~--v~vl~~aPGvvDT~mq~~ir~~~~~~p~~l~~f~el~~  217 (253)
T KOG1204|consen  152 -----------FSSWAAYCSSKAARNMYFMVLASEEP-FD--VRVLNYAPGVVDTQMQVCIRETSRMTPADLKMFKELKE  217 (253)
T ss_pred             -----------ccHHHHhhhhHHHHHHHHHHHhhcCc-cc--eeEEEccCCcccchhHHHHhhccCCCHHHHHHHHHHHh
Confidence                       89999999999999999999999965 56  999999999999999877642   223333222    2


Q ss_pred             HhhcCChHHHHHHHHHHHhcCccccCCceeeccCc
Q 019722          262 SKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCN  296 (336)
Q Consensus       262 ~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~  296 (336)
                      ...+..|...+..+..++....  +++|+++...+
T Consensus       218 ~~~ll~~~~~a~~l~~L~e~~~--f~sG~~vdy~D  250 (253)
T KOG1204|consen  218 SGQLLDPQVTAKVLAKLLEKGD--FVSGQHVDYYD  250 (253)
T ss_pred             cCCcCChhhHHHHHHHHHHhcC--ccccccccccc
Confidence            3455677788888888887432  78999986544

>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.95  E-value=1.1e-26  Score=206.08  Aligned_cols=215  Identities=24%  Similarity=0.208  Sum_probs=161.6

Q ss_pred             HHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCCCccEEEEcccCCCCCCC
Q 019722           51 TARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHA  130 (336)
Q Consensus        51 ia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~lv~nAg~~~~~~~  130 (336)
                      +|++|+++|++|++++|+.++.+             ...++++|+++.++++++++++.   +++|+||||||+..    
T Consensus         1 ~a~~l~~~G~~Vv~~~r~~~~~~-------------~~~~~~~Dl~~~~~v~~~~~~~~---~~iD~li~nAG~~~----   60 (241)
T PRK12428          1 TARLLRFLGARVIGVDRREPGMT-------------LDGFIQADLGDPASIDAAVAALP---GRIDALFNIAGVPG----   60 (241)
T ss_pred             ChHHHHhCCCEEEEEeCCcchhh-------------hhHhhcccCCCHHHHHHHHHHhc---CCCeEEEECCCCCC----
Confidence            47899999999999999876531             12457899999999999998874   58999999999752    


Q ss_pred             CCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccccccc-----------ccCCCCC
Q 019722          131 ISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQ-----------ISRNKSH  199 (336)
Q Consensus       131 ~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~~-----------~~~~~~~  199 (336)
                        .++++.++++|+.+++.+++.++|.|.+       .|+||++||.++...+. ..+....           ......+
T Consensus        61 --~~~~~~~~~vN~~~~~~l~~~~~~~~~~-------~g~Iv~isS~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  130 (241)
T PRK12428         61 --TAPVELVARVNFLGLRHLTEALLPRMAP-------GGAIVNVASLAGAEWPQ-RLELHKALAATASFDEGAAWLAAHP  130 (241)
T ss_pred             --CCCHHHhhhhchHHHHHHHHHHHHhccC-------CcEEEEeCcHHhhcccc-chHHHHhhhccchHHHHHHhhhccC
Confidence              2468999999999999999999999854       37999999987653211 0000000           0000012


Q ss_pred             CChhhHhHHHHHHHHHHHHHHH-HHHccCCCcEEEEEeeCCceeCCCCCccchhHH-HHH--HHHHHhhcCChHHHHHHH
Q 019722          200 YDATRAYALSKLANVLHTKELA-QRLKQMEANVTVNCVHPGIVRTRLTREREGFIT-DLV--FFLTSKLLKTIPQGAATT  275 (336)
Q Consensus       200 ~~~~~~Y~~sK~a~~~l~~~la-~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~a~~~  275 (336)
                      .++...|++||++++.+++.++ .++++.|  ||||+|+||++.|+|.+....... ...  ...+..+..+|++++..+
T Consensus       131 ~~~~~~Y~~sK~a~~~~~~~la~~e~~~~g--irvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~va~~~  208 (241)
T PRK12428        131 VALATGYQLSKEALILWTMRQAQPWFGARG--IRVNCVAPGPVFTPILGDFRSMLGQERVDSDAKRMGRPATADEQAAVL  208 (241)
T ss_pred             CCcccHHHHHHHHHHHHHHHHHHHhhhccC--eEEEEeecCCccCcccccchhhhhhHhhhhcccccCCCCCHHHHHHHH
Confidence            5567789999999999999999 9998877  999999999999999765322111 111  111233457899999999


Q ss_pred             HHHHhcCccccCCceeeccCccc
Q 019722          276 CYVAIHPRLVNVSGKYFADCNEA  298 (336)
Q Consensus       276 ~~l~~~~~~~~~~G~~~~~~~~~  298 (336)
                      +|+++ +...+++|+.+..+|+.
T Consensus       209 ~~l~s-~~~~~~~G~~i~vdgg~  230 (241)
T PRK12428        209 VFLCS-DAARWINGVNLPVDGGL  230 (241)
T ss_pred             HHHcC-hhhcCccCcEEEecCch
Confidence            99985 66788999999888763

>PRK08219 short chain dehydrogenase; Provisional

Probab=99.93  E-value=2.8e-24  Score=188.18  Aligned_cols=209  Identities=27%  Similarity=0.273  Sum_probs=166.4

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCCC
Q 019722           35 SVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLP  114 (336)
Q Consensus        35 gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  114 (336)
                      .|++|||||+++||+++++.|+++ ++|++++|+.+..++.....      ..+.++++|+++++++.++++.+    ++
T Consensus         3 ~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~------~~~~~~~~D~~~~~~~~~~~~~~----~~   71 (227)
T PRK08219          3 RPTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAEL------PGATPFPVDLTDPEAIAAAVEQL----GR   71 (227)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHh------ccceEEecCCCCHHHHHHHHHhc----CC
Confidence            589999999999999999999999 99999999987655443321      25788999999999998888753    47


Q ss_pred             ccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccccccc
Q 019722          115 LNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQ  192 (336)
Q Consensus       115 id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~~  192 (336)
                      +|++||++|.....  .+.+.+++.+++++|+.+.+.+.+.+++.+.++.      +++|++||..+..+          
T Consensus        72 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~------~~~v~~ss~~~~~~----------  135 (227)
T PRK08219         72 LDVLVHNAGVADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAAH------GHVVFINSGAGLRA----------  135 (227)
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC------CeEEEEcchHhcCc----------
Confidence            99999999975432  4567788999999999999999999999998753      79999999876554          


Q ss_pred             ccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHHHHHHHHhhcCChHHHH
Q 019722          193 ISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSKLLKTIPQGA  272 (336)
Q Consensus       193 ~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~a  272 (336)
                             .++...|+.+|++++.+++.++.++...   |++++|+||.+.+++........   ..........+++|++
T Consensus       136 -------~~~~~~y~~~K~a~~~~~~~~~~~~~~~---i~~~~i~pg~~~~~~~~~~~~~~---~~~~~~~~~~~~~dva  202 (227)
T PRK08219        136 -------NPGWGSYAASKFALRALADALREEEPGN---VRVTSVHPGRTDTDMQRGLVAQE---GGEYDPERYLRPETVA  202 (227)
T ss_pred             -------CCCCchHHHHHHHHHHHHHHHHHHhcCC---ceEEEEecCCccchHhhhhhhhh---ccccCCCCCCCHHHHH
Confidence                   4456789999999999999999887642   99999999999988654322110   0111223357899999


Q ss_pred             HHHHHHHhcCc
Q 019722          273 ATTCYVAIHPR  283 (336)
Q Consensus       273 ~~~~~l~~~~~  283 (336)
                      ..+++++..+.
T Consensus       203 ~~~~~~l~~~~  213 (227)
T PRK08219        203 KAVRFAVDAPP  213 (227)
T ss_pred             HHHHHHHcCCC
Confidence            99999997543

>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]

Probab=99.93  E-value=8.2e-25  Score=185.62  Aligned_cols=232  Identities=25%  Similarity=0.312  Sum_probs=188.0

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-----EEEEeeCChHHHHHHHHHHHhhCC--CCceEEEeccCCCHHHHHHHHH
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGA-----RLVLPARSLKAAEEAKARLASDCP--GSDIVVLPLDLSSLSSVRNFVS  106 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~-----~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~~Dl~~~~~v~~~~~  106 (336)
                      -+|+|||||++||||.+|+++|++...     +|++++|+.+++++..+.+.+.+|  ..++.++.+|+++..++.++.+
T Consensus         2 ~RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~~   81 (341)
T KOG1478|consen    2 MRKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRASK   81 (341)
T ss_pred             CceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHHH
Confidence            479999999999999999999998753     588899999999999999999998  4568899999999999999999


Q ss_pred             HHHhcCCCccEEEEcccCCCCC-----------------------------CCCCchhhhhHHHHHHhHHHHHHHHHHHH
Q 019722          107 QFHSLNLPLNLLINNAGKFAHQ-----------------------------HAISEDGIEMTFATNYLGHFLLTKLLLKK  157 (336)
Q Consensus       107 ~~~~~~~~id~lv~nAg~~~~~-----------------------------~~~~~~~~~~~~~vn~~~~~~l~~~~~~~  157 (336)
                      ++.++|.++|.++.|||.+..+                             ...+.+++...|+.|+.|+|.+++.+.|+
T Consensus        82 di~~rf~~ld~iylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D~lg~iFetnVFGhfyli~~l~pl  161 (341)
T KOG1478|consen   82 DIKQRFQRLDYIYLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISADGLGEIFETNVFGHFYLIRELEPL  161 (341)
T ss_pred             HHHHHhhhccEEEEccccCCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceecccchhhHhhhcccchhhhHhhhhhH
Confidence            9999999999999999976532                             11467788899999999999999999999


Q ss_pred             HHHhhccCCCCCeEEEEcCCccccccCCcccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEee
Q 019722          158 MIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVH  237 (336)
Q Consensus       158 l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~  237 (336)
                      +..+.     .+.+|++||..+.....+-.|+.        +..+..+|..||.+..-+.-.+-+.+.+.|  +.-++++
T Consensus       162 l~~~~-----~~~lvwtSS~~a~kk~lsleD~q--------~~kg~~pY~sSKrl~DlLh~A~~~~~~~~g--~~qyvv~  226 (341)
T KOG1478|consen  162 LCHSD-----NPQLVWTSSRMARKKNLSLEDFQ--------HSKGKEPYSSSKRLTDLLHVALNRNFKPLG--INQYVVQ  226 (341)
T ss_pred             hhcCC-----CCeEEEEeecccccccCCHHHHh--------hhcCCCCcchhHHHHHHHHHHHhccccccc--hhhhccc
Confidence            99876     46999999987765432222222        266777899999999999999999999888  9999999


Q ss_pred             CCceeCCCCCccchhHHHHH---HHHHHhhcCC------hHHHHHHHHHHHh
Q 019722          238 PGIVRTRLTREREGFITDLV---FFLTSKLLKT------IPQGAATTCYVAI  280 (336)
Q Consensus       238 PG~v~T~~~~~~~~~~~~~~---~~~~~~~~~~------~~~~a~~~~~l~~  280 (336)
                      ||..-|.+.......+-...   .......+++      |=.++.+.+|+..
T Consensus       227 pg~~tt~~~~~~l~~~~~~~~~~~fyl~rllgspwh~id~y~aa~A~vw~~l  278 (341)
T KOG1478|consen  227 PGIFTTNSFSEYLNPFTYFGMLCGFYLARLLGSPWHNIDPYKAANAPVWVTL  278 (341)
T ss_pred             CceeecchhhhhhhhHHHHHHHHHHHHHHHhcCcccccCccccccchhhhhh
Confidence            99999999887754333222   2222233333      3346888888865

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=99.92  E-value=2.5e-23  Score=195.58  Aligned_cols=201  Identities=17%  Similarity=0.152  Sum_probs=151.7

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      ..+++||+++||||++|||++++++|+++|++|++++|+.++.++...   ..  ...+..+.+|++|++++.+.+    
T Consensus       173 a~sl~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~~---~~--~~~v~~v~~Dvsd~~~v~~~l----  243 (406)
T PRK07424        173 ALSLKGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEIN---GE--DLPVKTLHWQVGQEAALAELL----  243 (406)
T ss_pred             ccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh---hc--CCCeEEEEeeCCCHHHHHHHh----
Confidence            356889999999999999999999999999999999998766543221   11  235778899999998876543    


Q ss_pred             hcCCCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcccc
Q 019722          110 SLNLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRY  189 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~  189 (336)
                         +++|++|||||.... .+.+.+++++++++|+.|++.++++++|.|++++. ...++.+|++|+ ++ ..       
T Consensus       244 ---~~IDiLInnAGi~~~-~~~s~e~~~~~~~vNv~g~i~Li~a~lp~m~~~~~-~~~~~iiVn~Ss-a~-~~-------  309 (406)
T PRK07424        244 ---EKVDILIINHGINVH-GERTPEAINKSYEVNTFSAWRLMELFFTTVKTNRD-KATKEVWVNTSE-AE-VN-------  309 (406)
T ss_pred             ---CCCCEEEECCCcCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-CCCCeEEEEEcc-cc-cc-------
Confidence               479999999997543 35677899999999999999999999999987531 011245666654 22 21       


Q ss_pred             cccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHHHHHHHHhhcCChH
Q 019722          190 LGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSKLLKTIP  269 (336)
Q Consensus       190 ~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~  269 (336)
                                .+....|++||+|+..++. ++++.  .+  +.|..+.||++.|++...               ...+|+
T Consensus       310 ----------~~~~~~Y~ASKaAl~~l~~-l~~~~--~~--~~I~~i~~gp~~t~~~~~---------------~~~spe  359 (406)
T PRK07424        310 ----------PAFSPLYELSKRALGDLVT-LRRLD--AP--CVVRKLILGPFKSNLNPI---------------GVMSAD  359 (406)
T ss_pred             ----------CCCchHHHHHHHHHHHHHH-HHHhC--CC--CceEEEEeCCCcCCCCcC---------------CCCCHH
Confidence                      2234579999999999974 44442  23  777788999999887321               235889


Q ss_pred             HHHHHHHHHHhcCc
Q 019722          270 QGAATTCYVAIHPR  283 (336)
Q Consensus       270 ~~a~~~~~l~~~~~  283 (336)
                      ++|+.+++.+..+.
T Consensus       360 ~vA~~il~~i~~~~  373 (406)
T PRK07424        360 WVAKQILKLAKRDF  373 (406)
T ss_pred             HHHHHHHHHHHCCC
Confidence            99999999987443

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=99.91  E-value=1.1e-22  Score=223.92  Aligned_cols=181  Identities=20%  Similarity=0.180  Sum_probs=153.2

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHC-CCEEEEeeCCh-------------------------------------------
Q 019722           34 SSVTAIITGATSGIGAETARVLAKR-GARLVLPARSL-------------------------------------------   69 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~-G~~V~~~~r~~-------------------------------------------   69 (336)
                      +|+++|||||++|||.+++++|+++ |++|++++|+.                                           
T Consensus      1996 ~g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~~ 2075 (2582)
T TIGR02813      1996 SDDVFLVTGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVRP 2075 (2582)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhcccc
Confidence            6899999999999999999999998 69999999982                                           


Q ss_pred             ----HHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCCCccEEEEcccCCCCC--CCCCchhhhhHHHHH
Q 019722           70 ----KAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATN  143 (336)
Q Consensus        70 ----~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn  143 (336)
                          ......++.+++.  +.++.++.||++|.+++.++++++.+. ++||+||||||+....  .+.+.++|++++++|
T Consensus      2076 ~~~~~ei~~~la~l~~~--G~~v~y~~~DVtD~~av~~av~~v~~~-g~IDgVVhnAGv~~~~~i~~~t~e~f~~v~~~n 2152 (2582)
T TIGR02813      2076 VLSSLEIAQALAAFKAA--GASAEYASADVTNSVSVAATVQPLNKT-LQITGIIHGAGVLADKHIQDKTLEEFNAVYGTK 2152 (2582)
T ss_pred             cchhHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHh-CCCcEEEECCccCCCCCcccCCHHHHHHHHHHH
Confidence                0111222333322  568999999999999999999999876 6899999999986543  577889999999999


Q ss_pred             HhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHH
Q 019722          144 YLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQR  223 (336)
Q Consensus       144 ~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e  223 (336)
                      +.|.+.+++++.+.+         .++||++||.++..+                 .+++..|+++|.+++.+++.++.+
T Consensus      2153 v~G~~~Ll~al~~~~---------~~~IV~~SSvag~~G-----------------~~gqs~YaaAkaaL~~la~~la~~ 2206 (2582)
T TIGR02813      2153 VDGLLSLLAALNAEN---------IKLLALFSSAAGFYG-----------------NTGQSDYAMSNDILNKAALQLKAL 2206 (2582)
T ss_pred             HHHHHHHHHHHHHhC---------CCeEEEEechhhcCC-----------------CCCcHHHHHHHHHHHHHHHHHHHH
Confidence            999999999887654         258999999998877                 677889999999999999999988


Q ss_pred             HccCCCcEEEEEeeCCceeCCCCC
Q 019722          224 LKQMEANVTVNCVHPGIVRTRLTR  247 (336)
Q Consensus       224 ~~~~g~~I~vn~v~PG~v~T~~~~  247 (336)
                      +.  +  ++||+|+||+++|+|..
T Consensus      2207 ~~--~--irV~sI~wG~wdtgm~~ 2226 (2582)
T TIGR02813      2207 NP--S--AKVMSFNWGPWDGGMVN 2226 (2582)
T ss_pred             cC--C--cEEEEEECCeecCCccc
Confidence            64  3  99999999999999864

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=99.88  E-value=1.8e-21  Score=187.45  Aligned_cols=226  Identities=17%  Similarity=0.084  Sum_probs=160.9

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhC-------CCCceEEEeccCCCHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDC-------PGSDIVVLPLDLSSLSSVR  102 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~-------~~~~~~~~~~Dl~~~~~v~  102 (336)
                      .....||++|||||+|+||++++++|+++|++|++++|+.++++.+.+++....       ...++.++.+|+++.+++.
T Consensus        75 ~~~~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~  154 (576)
T PLN03209         75 LDTKDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIG  154 (576)
T ss_pred             cccCCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHH
Confidence            445689999999999999999999999999999999999988877766554311       1236899999999998876


Q ss_pred             HHHHHHHhcCCCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccc
Q 019722          103 NFVSQFHSLNLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWF  182 (336)
Q Consensus       103 ~~~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~  182 (336)
                      ..+       +++|+||||+|....    ...++...+.+|+.+...+++++...    +     .+|||++||.++...
T Consensus       155 ~aL-------ggiDiVVn~AG~~~~----~v~d~~~~~~VN~~Gt~nLl~Aa~~a----g-----VgRIV~VSSiga~~~  214 (576)
T PLN03209        155 PAL-------GNASVVICCIGASEK----EVFDVTGPYRIDYLATKNLVDAATVA----K-----VNHFILVTSLGTNKV  214 (576)
T ss_pred             HHh-------cCCCEEEEccccccc----cccchhhHHHHHHHHHHHHHHHHHHh----C-----CCEEEEEccchhccc
Confidence            543       479999999997532    12346778999999999999887653    2     379999999865321


Q ss_pred             cCCcccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccc-hhHHHHHHHHH
Q 019722          183 SGDMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRERE-GFITDLVFFLT  261 (336)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~-~~~~~~~~~~~  261 (336)
                      .                .+.. .|. +|.++..+.+.+..++...|  |+++.|+||++.|++..... ...........
T Consensus       215 g----------------~p~~-~~~-sk~~~~~~KraaE~~L~~sG--IrvTIVRPG~L~tp~d~~~~t~~v~~~~~d~~  274 (576)
T PLN03209        215 G----------------FPAA-ILN-LFWGVLCWKRKAEEALIASG--LPYTIVRPGGMERPTDAYKETHNLTLSEEDTL  274 (576)
T ss_pred             C----------------cccc-chh-hHHHHHHHHHHHHHHHHHcC--CCEEEEECCeecCCccccccccceeecccccc
Confidence            0                1111 133 67777778888888888777  99999999999988644210 00000011112


Q ss_pred             HhhcCChHHHHHHHHHHHhcCccccCCceeeccCcc
Q 019722          262 SKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNE  297 (336)
Q Consensus       262 ~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~  297 (336)
                      ..+..+.+|+|+.+++++.++.+.  .++.+..-.+
T Consensus       275 ~gr~isreDVA~vVvfLasd~~as--~~kvvevi~~  308 (576)
T PLN03209        275 FGGQVSNLQVAELMACMAKNRRLS--YCKVVEVIAE  308 (576)
T ss_pred             CCCccCHHHHHHHHHHHHcCchhc--cceEEEEEeC
Confidence            234568899999999999866544  3555544333

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=99.88  E-value=2.9e-20  Score=171.98  Aligned_cols=253  Identities=15%  Similarity=0.112  Sum_probs=167.2

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCC
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNL  113 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  113 (336)
                      .||++|||||+|+||++++++|+++|++|+++.|+..........+.......++.++.+|+++.+++.++++       
T Consensus         4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------   76 (325)
T PLN02989          4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAID-------   76 (325)
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHc-------
Confidence            4799999999999999999999999999999998876554432222111112478999999999999888775       


Q ss_pred             CccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcccccccc
Q 019722          114 PLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQI  193 (336)
Q Consensus       114 ~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~~~  193 (336)
                      ++|++|||||....  ..+.+.+.+.+++|+.+++.+++++.+.+.        .++||++||..+..++..........
T Consensus        77 ~~d~vih~A~~~~~--~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~--------~~~iv~~SS~~~~~~~~~~~~~~~~~  146 (325)
T PLN02989         77 GCETVFHTASPVAI--TVKTDPQVELINPAVNGTINVLRTCTKVSS--------VKRVILTSSMAAVLAPETKLGPNDVV  146 (325)
T ss_pred             CCCEEEEeCCCCCC--CCCCChHHHHHHHHHHHHHHHHHHHHHcCC--------ceEEEEecchhheecCCccCCCCCcc
Confidence            58999999996532  234456788999999999999999887531        26999999986654321100000001


Q ss_pred             cCCCCCC-C-----hhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHHHHHHHHh----
Q 019722          194 SRNKSHY-D-----ATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSK----  263 (336)
Q Consensus       194 ~~~~~~~-~-----~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~----  263 (336)
                       ++.... +     ....|+.||.+.+.+++.++++.   +  +.++.+.|+.+.++...............+...    
T Consensus       147 -~E~~~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~--~~~~ilR~~~vyGp~~~~~~~~~~~~i~~~~~~~~~~  220 (325)
T PLN02989        147 -DETFFTNPSFAEERKQWYVLSKTLAEDAAWRFAKDN---E--IDLIVLNPGLVTGPILQPTLNFSVAVIVELMKGKNPF  220 (325)
T ss_pred             -CcCCCCchhHhcccccchHHHHHHHHHHHHHHHHHc---C--CeEEEEcCCceeCCCCCCCCCchHHHHHHHHcCCCCC
Confidence             111111 1     12469999999999999887654   4  999999999999987553221211122111111    


Q ss_pred             -----hcCChHHHHHHHHHHHhcCccccCCceeeccCcccccccCCCCHHHHHHHHHHHHHhhc
Q 019722          264 -----LLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWTSKLGSNSNEASRLWAASELLVS  322 (336)
Q Consensus       264 -----~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~  322 (336)
                           ....++|+|.+++.++..+..   .|.| +..+. ..+        ..++++.+.++++
T Consensus       221 ~~~~r~~i~v~Dva~a~~~~l~~~~~---~~~~-ni~~~-~~s--------~~ei~~~i~~~~~  271 (325)
T PLN02989        221 NTTHHRFVDVRDVALAHVKALETPSA---NGRY-IIDGP-VVT--------IKDIENVLREFFP  271 (325)
T ss_pred             CCcCcCeeEHHHHHHHHHHHhcCccc---CceE-EEecC-CCC--------HHHHHHHHHHHCC
Confidence                 122368899999888875432   4554 34443 222        2455555555554

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.88  E-value=2.2e-21  Score=162.49  Aligned_cols=173  Identities=24%  Similarity=0.225  Sum_probs=141.2

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHH---HHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhc
Q 019722           36 VTAIITGATSGIGAETARVLAKRGA-RLVLPARSLKAAEEA---KARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSL  111 (336)
Q Consensus        36 k~~lItGgs~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~---~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  111 (336)
                      |+++||||++|||.+++++|+++|+ .|++++|+....+..   .++++..  +.++.++.+|++++.++..+++++...
T Consensus         1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   78 (180)
T smart00822        1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEAL--GAEVTVVACDVADRAALAAALAAIPAR   78 (180)
T ss_pred             CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence            5799999999999999999999997 688888876543322   2344333  567889999999999999999999888


Q ss_pred             CCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcccc
Q 019722          112 NLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRY  189 (336)
Q Consensus       112 ~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~  189 (336)
                      ++++|++|||||.....  ...+.+++++.+++|+.+++.+++++.+.    +     .+++|++||..+..+       
T Consensus        79 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~-----~~~ii~~ss~~~~~~-------  142 (180)
T smart00822       79 LGPLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRDL----P-----LDFFVLFSSVAGVLG-------  142 (180)
T ss_pred             cCCeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhccC----C-----cceEEEEccHHHhcC-------
Confidence            89999999999976432  56677889999999999999999988431    1     479999999877665       


Q ss_pred             cccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCcee
Q 019722          190 LGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVR  242 (336)
Q Consensus       190 ~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~  242 (336)
                                .++...|+++|.+++.+++.++.    .+  +++..+.||++.
T Consensus       143 ----------~~~~~~y~~sk~~~~~~~~~~~~----~~--~~~~~~~~g~~~  179 (180)
T smart00822      143 ----------NPGQANYAAANAFLDALAAHRRA----RG--LPATSINWGAWA  179 (180)
T ss_pred             ----------CCCchhhHHHHHHHHHHHHHHHh----cC--CceEEEeecccc
Confidence                      45667899999999999877653    35  889999999875

It uses NADPH to reduce the keto group to a hydroxy group.

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=99.87  E-value=4.2e-20  Score=170.85  Aligned_cols=201  Identities=14%  Similarity=0.105  Sum_probs=149.5

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCC--CEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHh
Q 019722           33 LSSVTAIITGATSGIGAETARVLAKRG--ARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHS  110 (336)
Q Consensus        33 l~gk~~lItGgs~gIG~aia~~L~~~G--~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  110 (336)
                      ++||++|||||+|+||++++++|+++|  ++|++++|+..........+    ...++.++.+|++|.+++.++++    
T Consensus         2 ~~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~----~~~~~~~v~~Dl~d~~~l~~~~~----   73 (324)
T TIGR03589         2 FNNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKF----PAPCLRFFIGDVRDKERLTRALR----   73 (324)
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHh----CCCcEEEEEccCCCHHHHHHHHh----
Confidence            578999999999999999999999987  68999999866543333222    13478899999999999888765    


Q ss_pred             cCCCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccccc
Q 019722          111 LNLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYL  190 (336)
Q Consensus       111 ~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~  190 (336)
                         ++|++||+||.....  ....+.++.+++|+.++..+++++.+.    +     .+++|++||....          
T Consensus        74 ---~iD~Vih~Ag~~~~~--~~~~~~~~~~~~Nv~g~~~ll~aa~~~----~-----~~~iV~~SS~~~~----------  129 (324)
T TIGR03589        74 ---GVDYVVHAAALKQVP--AAEYNPFECIRTNINGAQNVIDAAIDN----G-----VKRVVALSTDKAA----------  129 (324)
T ss_pred             ---cCCEEEECcccCCCc--hhhcCHHHHHHHHHHHHHHHHHHHHHc----C-----CCEEEEEeCCCCC----------
Confidence               589999999965322  122234578999999999999998863    1     3699999996432          


Q ss_pred             ccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHHHHHHHHh-------
Q 019722          191 GQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSK-------  263 (336)
Q Consensus       191 ~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~-------  263 (336)
                                .+...|+++|++.+.+++.++.+....|  +++++++||.+.++...    ..+.+.......       
T Consensus       130 ----------~p~~~Y~~sK~~~E~l~~~~~~~~~~~g--i~~~~lR~g~v~G~~~~----~i~~~~~~~~~~~~~~~i~  193 (324)
T TIGR03589       130 ----------NPINLYGATKLASDKLFVAANNISGSKG--TRFSVVRYGNVVGSRGS----VVPFFKSLKEEGVTELPIT  193 (324)
T ss_pred             ----------CCCCHHHHHHHHHHHHHHHHHhhccccC--cEEEEEeecceeCCCCC----cHHHHHHHHHhCCCCeeeC
Confidence                      1234699999999999999988777767  99999999999987432    111111111111       


Q ss_pred             ------hcCChHHHHHHHHHHHhc
Q 019722          264 ------LLKTIPQGAATTCYVAIH  281 (336)
Q Consensus       264 ------~~~~~~~~a~~~~~l~~~  281 (336)
                            ....++|.+.+++.++..
T Consensus       194 ~~~~~r~~i~v~D~a~a~~~al~~  217 (324)
T TIGR03589       194 DPRMTRFWITLEQGVNFVLKSLER  217 (324)
T ss_pred             CCCceEeeEEHHHHHHHHHHHHhh
Confidence                  124678889998888763

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=99.87  E-value=1.1e-19  Score=166.85  Aligned_cols=216  Identities=14%  Similarity=-0.004  Sum_probs=150.6

Q ss_pred             CCCCEEEEeCCCChHHHH--HHHHHHHCCCEEEEeeCChHHHH------------HHHHHHHhhCCCCceEEEeccCCCH
Q 019722           33 LSSVTAIITGATSGIGAE--TARVLAKRGARLVLPARSLKAAE------------EAKARLASDCPGSDIVVLPLDLSSL   98 (336)
Q Consensus        33 l~gk~~lItGgs~gIG~a--ia~~L~~~G~~V~~~~r~~~~~~------------~~~~~l~~~~~~~~~~~~~~Dl~~~   98 (336)
                      -.||++||||+++|||.+  +++.| ++|++|+++++..++.+            ...+.++..  +..+..+.||++++
T Consensus        39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~--G~~a~~i~~DVss~  115 (398)
T PRK13656         39 NGPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAA--GLYAKSINGDAFSD  115 (398)
T ss_pred             CCCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhc--CCceEEEEcCCCCH
Confidence            357999999999999999  89999 99999888885432211            222333322  45678899999999


Q ss_pred             HHHHHHHHHHHhcCCCccEEEEcccCCCCCC------------------------------------CCCchhhhhHHHH
Q 019722           99 SSVRNFVSQFHSLNLPLNLLINNAGKFAHQH------------------------------------AISEDGIEMTFAT  142 (336)
Q Consensus        99 ~~v~~~~~~~~~~~~~id~lv~nAg~~~~~~------------------------------------~~~~~~~~~~~~v  142 (336)
                      ++++++++++.+.+|+||+||||+|......                                    ..+.++++.+  +
T Consensus       116 E~v~~lie~I~e~~G~IDiLVnSaA~~~r~~p~~g~~~~s~lKpi~~~~~~~~~d~~~~~i~~~s~~~~~~~ei~~T--v  193 (398)
T PRK13656        116 EIKQKVIELIKQDLGQVDLVVYSLASPRRTDPKTGEVYRSVLKPIGEPYTGKTLDTDKDVIIEVTVEPATEEEIADT--V  193 (398)
T ss_pred             HHHHHHHHHHHHhcCCCCEEEECCccCCCCCcccCceeecccccccccccCCcccccccceeEEEEeeCCHHHHHHH--H
Confidence            9999999999999999999999999764321                                    0112222222  2


Q ss_pred             HHhHH---HHH--HHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcccccccccCCCCCCChh--hHhHHHHHHHHH
Q 019722          143 NYLGH---FLL--TKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDAT--RAYALSKLANVL  215 (336)
Q Consensus       143 n~~~~---~~l--~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~Y~~sK~a~~~  215 (336)
                      ++.|.   ...  .+...+.|.+       ++++|-+|...+...                 +|.+  ..-+.+|++|+.
T Consensus       194 ~vMggedw~~Wi~al~~a~lla~-------g~~~va~TY~G~~~t-----------------~p~Y~~g~mG~AKa~LE~  249 (398)
T PRK13656        194 KVMGGEDWELWIDALDEAGVLAE-------GAKTVAYSYIGPELT-----------------HPIYWDGTIGKAKKDLDR  249 (398)
T ss_pred             HhhccchHHHHHHHHHhcccccC-------CcEEEEEecCCccee-----------------ecccCCchHHHHHHHHHH
Confidence            33333   112  3344444533       589999999877665                 4444  367999999999


Q ss_pred             HHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHH--HHHHHHHHhhcCChHHHHHHHHHHHh
Q 019722          216 HTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFIT--DLVFFLTSKLLKTIPQGAATTCYVAI  280 (336)
Q Consensus       216 l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~--~~~~~~~~~~~~~~~~~a~~~~~l~~  280 (336)
                      .+|.|+.++++.|  ||+|++.+|.+.|.-...++.+.-  ..+..+ .+-.+.-|....-+..|..
T Consensus       250 ~~r~La~~L~~~g--iran~i~~g~~~T~Ass~Ip~~~ly~~~l~kv-mk~~g~he~~ieq~~rl~~  313 (398)
T PRK13656        250 TALALNEKLAAKG--GDAYVSVLKAVVTQASSAIPVMPLYISLLFKV-MKEKGTHEGCIEQIYRLFS  313 (398)
T ss_pred             HHHHHHHHhhhcC--CEEEEEecCcccchhhhcCCCcHHHHHHHHHH-HHhcCCCCChHHHHHHHHH
Confidence            9999999999988  999999999999998888764322  111222 1223344555555555554

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=99.85  E-value=4.5e-19  Score=163.80  Aligned_cols=235  Identities=16%  Similarity=0.142  Sum_probs=154.9

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcC
Q 019722           33 LSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLN  112 (336)
Q Consensus        33 l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  112 (336)
                      -+||+++||||+|+||++++++|+++|++|+++.|+....+.............++.++.+|+++++++..+++      
T Consensus         3 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   76 (322)
T PLN02986          3 GGGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIE------   76 (322)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHh------
Confidence            56899999999999999999999999999999999876544332222111113478999999999998888776      


Q ss_pred             CCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCcccc-ccCC---ccc
Q 019722          113 LPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSW-FSGD---MIR  188 (336)
Q Consensus       113 ~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~-~~~~---~~~  188 (336)
                       ++|++||+|+.....   ..+...+.+++|+.+...+++++....   .     -+|||++||.+... +.+.   ...
T Consensus        77 -~~d~vih~A~~~~~~---~~~~~~~~~~~nv~gt~~ll~~~~~~~---~-----v~rvV~~SS~~~~~~~~~~~~~~~~  144 (322)
T PLN02986         77 -GCDAVFHTASPVFFT---VKDPQTELIDPALKGTINVLNTCKETP---S-----VKRVILTSSTAAVLFRQPPIEANDV  144 (322)
T ss_pred             -CCCEEEEeCCCcCCC---CCCchhhhhHHHHHHHHHHHHHHHhcC---C-----ccEEEEecchhheecCCccCCCCCC
Confidence             589999999964321   122345678999999999998865421   1     25999999976532 2110   000


Q ss_pred             ccccccCCCC-CCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHHHHHHHH-----
Q 019722          189 YLGQISRNKS-HYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTS-----  262 (336)
Q Consensus       189 ~~~~~~~~~~-~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~-----  262 (336)
                      +++....... .......|+.||.+.+.+++.+.++.   +  ++++.++|+.+.++...............+..     
T Consensus       145 ~~E~~~~~p~~~~~~~~~Y~~sK~~aE~~~~~~~~~~---~--~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~  219 (322)
T PLN02986        145 VDETFFSDPSLCRETKNWYPLSKILAENAAWEFAKDN---G--IDMVVLNPGFICGPLLQPTLNFSVELIVDFINGKNLF  219 (322)
T ss_pred             cCcccCCChHHhhccccchHHHHHHHHHHHHHHHHHh---C--CeEEEEcccceeCCCCCCCCCccHHHHHHHHcCCCCC
Confidence            1110000000 00123569999999999998887654   4  99999999999998754321111111111111     


Q ss_pred             ----hhcCChHHHHHHHHHHHhcCccccCCceeec
Q 019722          263 ----KLLKTIPQGAATTCYVAIHPRLVNVSGKYFA  293 (336)
Q Consensus       263 ----~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~  293 (336)
                          .....++|+|.+++.++..+..   .|.|..
T Consensus       220 ~~~~~~~v~v~Dva~a~~~al~~~~~---~~~yni  251 (322)
T PLN02986        220 NNRFYRFVDVRDVALAHIKALETPSA---NGRYII  251 (322)
T ss_pred             CCcCcceeEHHHHHHHHHHHhcCccc---CCcEEE
Confidence                1234678999999999875532   455543

>PLN02583 cinnamoyl-CoA reductase

Probab=99.84  E-value=1.1e-18  Score=159.49  Aligned_cols=235  Identities=12%  Similarity=0.035  Sum_probs=154.7

Q ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHH--HHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           32 NLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKA--AEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        32 ~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~--~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      +=++|+++||||+|+||++++++|+++|++|+++.|+...  ..+....+...  +.++.++++|++|.+++..++.   
T Consensus         3 ~~~~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~~~~~~~~~l~~~--~~~~~~~~~Dl~d~~~~~~~l~---   77 (297)
T PLN02583          3 DESSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEKEIRGLSCE--EERLKVFDVDPLDYHSILDALK---   77 (297)
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchhhhHHHHHHhcccC--CCceEEEEecCCCHHHHHHHHc---
Confidence            4457899999999999999999999999999999986432  22223333211  3468899999999998876654   


Q ss_pred             hcCCCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCcccccc-CCccc
Q 019722          110 SLNLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFS-GDMIR  188 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~-~~~~~  188 (336)
                          ..|.++|.++.....    ...+++++++|+.+++.+++++.+.+.        .+|||++||.++.... .... 
T Consensus        78 ----~~d~v~~~~~~~~~~----~~~~~~~~~~nv~gt~~ll~aa~~~~~--------v~riV~~SS~~a~~~~~~~~~-  140 (297)
T PLN02583         78 ----GCSGLFCCFDPPSDY----PSYDEKMVDVEVRAAHNVLEACAQTDT--------IEKVVFTSSLTAVIWRDDNIS-  140 (297)
T ss_pred             ----CCCEEEEeCccCCcc----cccHHHHHHHHHHHHHHHHHHHHhcCC--------ccEEEEecchHheecccccCC-
Confidence                578888876543211    124678999999999999999987641        2599999998665321 1000 


Q ss_pred             ccccccCCCCCCCh------hhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHHHHHHH-
Q 019722          189 YLGQISRNKSHYDA------TRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLT-  261 (336)
Q Consensus       189 ~~~~~~~~~~~~~~------~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~-  261 (336)
                       .....++..+.+.      ...|+.||...+.+++.++++.   +  +++++|+|+.|.++................. 
T Consensus       141 -~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~aE~~~~~~~~~~---g--i~~v~lrp~~v~Gp~~~~~~~~~~~~~~~~~~  214 (297)
T PLN02583        141 -TQKDVDERSWSDQNFCRKFKLWHALAKTLSEKTAWALAMDR---G--VNMVSINAGLLMGPSLTQHNPYLKGAAQMYEN  214 (297)
T ss_pred             -CCCCCCcccCCCHHHHhhcccHHHHHHHHHHHHHHHHHHHh---C--CcEEEEcCCcccCCCCCCchhhhcCCcccCcc
Confidence             0001111111111      1269999999999998887653   4  9999999999998865431110000000000 


Q ss_pred             -HhhcCChHHHHHHHHHHHhcCccccCCceeeccCcc
Q 019722          262 -SKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNE  297 (336)
Q Consensus       262 -~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~  297 (336)
                       ......++|+|.+.+.++..+..   .|+|++..+.
T Consensus       215 ~~~~~v~V~Dva~a~~~al~~~~~---~~r~~~~~~~  248 (297)
T PLN02583        215 GVLVTVDVNFLVDAHIRAFEDVSS---YGRYLCFNHI  248 (297)
T ss_pred             cCcceEEHHHHHHHHHHHhcCccc---CCcEEEecCC
Confidence             11245678999999999875543   4677755443

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=99.83  E-value=9.7e-19  Score=157.00  Aligned_cols=238  Identities=16%  Similarity=0.129  Sum_probs=174.0

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHH--HHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhc
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEE--AKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSL  111 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~--~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  111 (336)
                      .+++|+||||+|.||++|+++|+++|+.|+.+.|+++..++  .+.+++..  ..++..+.+|+.++++.+.+++     
T Consensus         5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~~l~~a--~~~l~l~~aDL~d~~sf~~ai~-----   77 (327)
T KOG1502|consen    5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLRKLEGA--KERLKLFKADLLDEGSFDKAID-----   77 (327)
T ss_pred             CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHHhcccC--cccceEEeccccccchHHHHHh-----
Confidence            78999999999999999999999999999999999987554  35555433  5579999999999999999998     


Q ss_pred             CCCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcccccc
Q 019722          112 NLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLG  191 (336)
Q Consensus       112 ~~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~  191 (336)
                        +.|.|||.|..+.....   +.-.+.+...+.|+..+++++...-  +      =.|||++||.++...+..+..-..
T Consensus        78 --gcdgVfH~Asp~~~~~~---~~e~~li~pav~Gt~nVL~ac~~~~--s------VkrvV~TSS~aAv~~~~~~~~~~~  144 (327)
T KOG1502|consen   78 --GCDGVFHTASPVDFDLE---DPEKELIDPAVKGTKNVLEACKKTK--S------VKRVVYTSSTAAVRYNGPNIGENS  144 (327)
T ss_pred             --CCCEEEEeCccCCCCCC---CcHHhhhhHHHHHHHHHHHHHhccC--C------cceEEEeccHHHhccCCcCCCCCc
Confidence              68999999997665321   1223788999999999999887753  0      149999999988875422221111


Q ss_pred             cccCCC----C-CCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHHHHHHHH----
Q 019722          192 QISRNK----S-HYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTS----  262 (336)
Q Consensus       192 ~~~~~~----~-~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~----  262 (336)
                      ...++.    . .......|+.||...|..+..++.+-   +  +...+|+|+.|-+|...............+..    
T Consensus       145 vvdE~~wsd~~~~~~~~~~Y~~sK~lAEkaAw~fa~e~---~--~~lv~inP~lV~GP~l~~~l~~s~~~~l~~i~G~~~  219 (327)
T KOG1502|consen  145 VVDEESWSDLDFCRCKKLWYALSKTLAEKAAWEFAKEN---G--LDLVTINPGLVFGPGLQPSLNSSLNALLKLIKGLAE  219 (327)
T ss_pred             ccccccCCcHHHHHhhHHHHHHHHHHHHHHHHHHHHhC---C--ccEEEecCCceECCCcccccchhHHHHHHHHhcccc
Confidence            111111    0 00122469999999888888888774   3  99999999999999888743221111111111    


Q ss_pred             ------hhcCChHHHHHHHHHHHhcCccccCCceeeccCcccc
Q 019722          263 ------KLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAW  299 (336)
Q Consensus       263 ------~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  299 (336)
                            .......|+|.+-+.++-.|.+   .|+|++......
T Consensus       220 ~~~n~~~~~VdVrDVA~AHv~a~E~~~a---~GRyic~~~~~~  259 (327)
T KOG1502|consen  220 TYPNFWLAFVDVRDVALAHVLALEKPSA---KGRYICVGEVVS  259 (327)
T ss_pred             cCCCCceeeEeHHHHHHHHHHHHcCccc---CceEEEecCccc
Confidence                  1235678999999999987776   599998887654

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=99.83  E-value=5.2e-19  Score=165.23  Aligned_cols=225  Identities=16%  Similarity=0.091  Sum_probs=153.9

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcC
Q 019722           33 LSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLN  112 (336)
Q Consensus        33 l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  112 (336)
                      ++||++|||||+|+||+++++.|+++|++|++++|+..........+..   ..++.++.+|+++.+++.++++..    
T Consensus         2 ~~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~----   74 (349)
T TIGR02622         2 WQGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNL---AKKIEDHFGDIRDAAKLRKAIAEF----   74 (349)
T ss_pred             cCCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHhh---cCCceEEEccCCCHHHHHHHHhhc----
Confidence            4689999999999999999999999999999999887654433332221   346788999999999999888753    


Q ss_pred             CCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccccccc
Q 019722          113 LPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQ  192 (336)
Q Consensus       113 ~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~~  192 (336)
                       ++|+|||+|+....  ..+.+++...+++|+.+.+.+++++...   ..     .+++|++||.... +....    ..
T Consensus        75 -~~d~vih~A~~~~~--~~~~~~~~~~~~~N~~g~~~ll~a~~~~---~~-----~~~iv~~SS~~vy-g~~~~----~~  138 (349)
T TIGR02622        75 -KPEIVFHLAAQPLV--RKSYADPLETFETNVMGTVNLLEAIRAI---GS-----VKAVVNVTSDKCY-RNDEW----VW  138 (349)
T ss_pred             -CCCEEEECCccccc--ccchhCHHHHHHHhHHHHHHHHHHHHhc---CC-----CCEEEEEechhhh-CCCCC----CC
Confidence             58999999995332  2344567789999999999999987431   10     2599999996432 21100    00


Q ss_pred             ccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCC--CcEEEEEeeCCceeCCCCCccchhHHHHHHHHHHh-------
Q 019722          193 ISRNKSHYDATRAYALSKLANVLHTKELAQRLKQME--ANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSK-------  263 (336)
Q Consensus       193 ~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g--~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~-------  263 (336)
                      ...+.....+...|+.+|++.+.+++.++.++....  ++++++.+.|+.+.++.........+.+.......       
T Consensus       139 ~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~~  218 (349)
T TIGR02622       139 GYRETDPLGGHDPYSSSKACAELVIASYRSSFFGVANFHGIKIASARAGNVIGGGDWAEDRLIPDVIRAFSSNKIVIIRN  218 (349)
T ss_pred             CCccCCCCCCCCcchhHHHHHHHHHHHHHHHhhcccccCCCcEEEEccCcccCCCcchhhhhhHHHHHHHhcCCCeEECC
Confidence            011111234456799999999999999998875420  13999999999999875321112222232222111       


Q ss_pred             -----hcCChHHHHHHHHHHHh
Q 019722          264 -----LLKTIPQGAATTCYVAI  280 (336)
Q Consensus       264 -----~~~~~~~~a~~~~~l~~  280 (336)
                           .....+|.+.+++.++.
T Consensus       219 g~~~rd~i~v~D~a~a~~~~~~  240 (349)
T TIGR02622       219 PDATRPWQHVLEPLSGYLLLAE  240 (349)
T ss_pred             CCcccceeeHHHHHHHHHHHHH
Confidence                 11234677888877664

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>PRK06720 hypothetical protein; Provisional

Probab=99.82  E-value=7.4e-19  Score=146.78  Aligned_cols=146  Identities=18%  Similarity=0.251  Sum_probs=119.1

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHh
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHS  110 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  110 (336)
                      ++++||+++||||++|||.++++.|+++|++|++++|+.+.+++..+++.+.  +.++.++++|+++.+++.++++++.+
T Consensus        12 ~~l~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~v~~~v~~~~~   89 (169)
T PRK06720         12 MKLAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNL--GGEALFVSYDMEKQGDWQRVISITLN   89 (169)
T ss_pred             cccCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999999988877777777643  45678899999999999999999998


Q ss_pred             cCCCccEEEEcccCCCCC---CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhcc--CCCCCeEEEEcCCcccc
Q 019722          111 LNLPLNLLINNAGKFAHQ---HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKA--TGIQGRIVNVSSSIHSW  181 (336)
Q Consensus       111 ~~~~id~lv~nAg~~~~~---~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~--~~~~grIV~vsS~~~~~  181 (336)
                      .++++|++|||||+....   .+.+.++ ++  .+|+.+.+..++++.+.+.++++.  ..+.||...||+.+...
T Consensus        90 ~~G~iDilVnnAG~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (169)
T PRK06720         90 AFSRIDMLFQNAGLYKIDSIFSRQQEND-SN--VLCINDVWIEIKQLTSSFMKQQEEVVLSDLPIFGIIGTKGQSF  162 (169)
T ss_pred             HcCCCCEEEECCCcCCCCCcccccchhH-hh--ceeccHHHHHHHHHHHHHHhcCCEEEeecCceeeEeccccccc
Confidence            899999999999976543   2223223 33  667788899999999998876542  24568999999976553

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.82  E-value=3e-19  Score=151.29  Aligned_cols=172  Identities=25%  Similarity=0.259  Sum_probs=133.3

Q ss_pred             EEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCCh---HHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcC
Q 019722           37 TAIITGATSGIGAETARVLAKRGA-RLVLPARSL---KAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLN  112 (336)
Q Consensus        37 ~~lItGgs~gIG~aia~~L~~~G~-~V~~~~r~~---~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  112 (336)
                      ++|||||++|||..+++.|+++|. +|++++|+.   ....+..++++..  +.++.+++||++|++++.++++++.+.+
T Consensus         2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~--g~~v~~~~~Dv~d~~~v~~~~~~~~~~~   79 (181)
T PF08659_consen    2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESA--GARVEYVQCDVTDPEAVAAALAQLRQRF   79 (181)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHT--T-EEEEEE--TTSHHHHHHHHHTSHTTS
T ss_pred             EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhC--CCceeeeccCccCHHHHHHHHHHHHhcc
Confidence            789999999999999999999997 899999993   2345677777765  7899999999999999999999999988


Q ss_pred             CCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccccc
Q 019722          113 LPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYL  190 (336)
Q Consensus       113 ~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~  190 (336)
                      ++|+.+||+||.....  .+.+.+.++.+++..+.+...|.+.+.+.-         -..+|++||.++..+        
T Consensus        80 ~~i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~~~---------l~~~i~~SSis~~~G--------  142 (181)
T PF08659_consen   80 GPIDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALENRP---------LDFFILFSSISSLLG--------  142 (181)
T ss_dssp             S-EEEEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTTTT---------TSEEEEEEEHHHHTT--------
T ss_pred             CCcceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhcCC---------CCeEEEECChhHhcc--------
Confidence            9999999999986543  677889999999999999999988877621         358999999998887        


Q ss_pred             ccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCcee
Q 019722          191 GQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVR  242 (336)
Q Consensus       191 ~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~  242 (336)
                               .+++..|+++.+.++.+++..+.    .|  ..+.+|+.|..+
T Consensus       143 ---------~~gq~~YaaAN~~lda~a~~~~~----~g--~~~~sI~wg~W~  179 (181)
T PF08659_consen  143 ---------GPGQSAYAAANAFLDALARQRRS----RG--LPAVSINWGAWD  179 (181)
T ss_dssp             ----------TTBHHHHHHHHHHHHHHHHHHH----TT--SEEEEEEE-EBS
T ss_pred             ---------CcchHhHHHHHHHHHHHHHHHHh----CC--CCEEEEEccccC
Confidence                     77899999999999998887554    24  668888877653

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>PLN02650 dihydroflavonol-4-reductase

Probab=99.81  E-value=1.6e-17  Score=155.35  Aligned_cols=225  Identities=17%  Similarity=0.115  Sum_probs=151.2

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCC
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNL  113 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  113 (336)
                      ..|++|||||+|.||++++++|+++|++|++++|+..........+.......++.++.+|+++.+.+..+++       
T Consensus         4 ~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~-------   76 (351)
T PLN02650          4 QKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAIR-------   76 (351)
T ss_pred             CCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHHHHh-------
Confidence            4578999999999999999999999999999999876555433222111112368899999999998887775       


Q ss_pred             CccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccc-cccc
Q 019722          114 PLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIR-YLGQ  192 (336)
Q Consensus       114 ~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~-~~~~  192 (336)
                      .+|+|||+|+.....   ..+..++.+++|+.++..+++++.+...        .+++|++||............ +++.
T Consensus        77 ~~d~ViH~A~~~~~~---~~~~~~~~~~~Nv~gt~~ll~aa~~~~~--------~~r~v~~SS~~~~~~~~~~~~~~~E~  145 (351)
T PLN02650         77 GCTGVFHVATPMDFE---SKDPENEVIKPTVNGMLSIMKACAKAKT--------VRRIVFTSSAGTVNVEEHQKPVYDED  145 (351)
T ss_pred             CCCEEEEeCCCCCCC---CCCchhhhhhHHHHHHHHHHHHHHhcCC--------ceEEEEecchhhcccCCCCCCccCcc
Confidence            589999999864321   1233457899999999999999877421        148999999754332111111 1111


Q ss_pred             ccCCC----CCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCcc--chhHHHHHHHH------
Q 019722          193 ISRNK----SHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRER--EGFITDLVFFL------  260 (336)
Q Consensus       193 ~~~~~----~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~--~~~~~~~~~~~------  260 (336)
                      .....    ........|+.||.+.+.+++.++.++   |  ++++.+.|+.+.+|.....  ....... ...      
T Consensus       146 ~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---g--i~~~ilRp~~v~Gp~~~~~~~~~~~~~~-~~~~~~~~~  219 (351)
T PLN02650        146 CWSDLDFCRRKKMTGWMYFVSKTLAEKAAWKYAAEN---G--LDFISIIPTLVVGPFISTSMPPSLITAL-SLITGNEAH  219 (351)
T ss_pred             cCCchhhhhccccccchHHHHHHHHHHHHHHHHHHc---C--CeEEEECCCceECCCCCCCCCccHHHHH-HHhcCCccc
Confidence            00000    001122479999999999999988763   4  9999999999999865431  1111111 000      


Q ss_pred             ----HHhhcCChHHHHHHHHHHHhcC
Q 019722          261 ----TSKLLKTIPQGAATTCYVAIHP  282 (336)
Q Consensus       261 ----~~~~~~~~~~~a~~~~~l~~~~  282 (336)
                          .......++|++.+++.++..+
T Consensus       220 ~~~~~~r~~v~V~Dva~a~~~~l~~~  245 (351)
T PLN02650        220 YSIIKQGQFVHLDDLCNAHIFLFEHP  245 (351)
T ss_pred             cCcCCCcceeeHHHHHHHHHHHhcCc
Confidence                0123456799999999988754

>PLN02214 cinnamoyl-CoA reductase

Probab=99.81  E-value=1.8e-17  Score=154.47  Aligned_cols=231  Identities=15%  Similarity=0.149  Sum_probs=156.5

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHH-HHHHHhhCCCCceEEEeccCCCHHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEA-KARLASDCPGSDIVVLPLDLSSLSSVRNFVSQF  108 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~-~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~  108 (336)
                      ...+++|+++||||+|+||++++++|+++|++|++++|+.+..... ...+..  ...++.++.+|+++..++..+++  
T Consensus         5 ~~~~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~--   80 (342)
T PLN02214          5 VASPAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEG--GKERLILCKADLQDYEALKAAID--   80 (342)
T ss_pred             cccCCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHHhhC--CCCcEEEEecCcCChHHHHHHHh--
Confidence            3446789999999999999999999999999999999986643221 222221  12468899999999999888775  


Q ss_pred             HhcCCCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcc-
Q 019722          109 HSLNLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMI-  187 (336)
Q Consensus       109 ~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~-  187 (336)
                           ++|+|||+|+..       .+++++.+++|+.++..+++++...    +     -+++|++||..+.++.+... 
T Consensus        81 -----~~d~Vih~A~~~-------~~~~~~~~~~nv~gt~~ll~aa~~~----~-----v~r~V~~SS~~avyg~~~~~~  139 (342)
T PLN02214         81 -----GCDGVFHTASPV-------TDDPEQMVEPAVNGAKFVINAAAEA----K-----VKRVVITSSIGAVYMDPNRDP  139 (342)
T ss_pred             -----cCCEEEEecCCC-------CCCHHHHHHHHHHHHHHHHHHHHhc----C-----CCEEEEeccceeeeccCCCCC
Confidence                 589999999964       2346788999999999999987653    1     25999999976665422110 


Q ss_pred             --cccccccCC-CCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCcc-chhHHHHHHHHHH-
Q 019722          188 --RYLGQISRN-KSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRER-EGFITDLVFFLTS-  262 (336)
Q Consensus       188 --~~~~~~~~~-~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~-~~~~~~~~~~~~~-  262 (336)
                        .+++....+ .........|+.||.+.+.+++.++++.   +  +++..++|+.|..+..... ............. 
T Consensus       140 ~~~~~E~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~---g--~~~v~lRp~~vyGp~~~~~~~~~~~~~~~~~~g~  214 (342)
T PLN02214        140 EAVVDESCWSDLDFCKNTKNWYCYGKMVAEQAAWETAKEK---G--VDLVVLNPVLVLGPPLQPTINASLYHVLKYLTGS  214 (342)
T ss_pred             CcccCcccCCChhhccccccHHHHHHHHHHHHHHHHHHHc---C--CcEEEEeCCceECCCCCCCCCchHHHHHHHHcCC
Confidence              111110000 0011234579999999999999887664   4  9999999999998864421 1111111111111 


Q ss_pred             --------hhcCChHHHHHHHHHHHhcCccccCCceeec
Q 019722          263 --------KLLKTIPQGAATTCYVAIHPRLVNVSGKYFA  293 (336)
Q Consensus       263 --------~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~  293 (336)
                              .....++|+|.+++.++..+.   ..|+|+.
T Consensus       215 ~~~~~~~~~~~i~V~Dva~a~~~al~~~~---~~g~yn~  250 (342)
T PLN02214        215 AKTYANLTQAYVDVRDVALAHVLVYEAPS---ASGRYLL  250 (342)
T ss_pred             cccCCCCCcCeeEHHHHHHHHHHHHhCcc---cCCcEEE
Confidence                    012357889999988886543   2466553

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=99.81  E-value=1.2e-17  Score=154.14  Aligned_cols=232  Identities=16%  Similarity=0.121  Sum_probs=151.4

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhh-CCCCceEEEeccCCCHHHHHHHHHHHHhcC
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASD-CPGSDIVVLPLDLSSLSSVRNFVSQFHSLN  112 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  112 (336)
                      +||++|||||+|.||++++++|+++|++|+++.|+........ .+... ....++.++++|++++.++..+++      
T Consensus         3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   75 (322)
T PLN02662          3 EGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKTE-HLLALDGAKERLHLFKANLLEEGSFDSVVD------   75 (322)
T ss_pred             CCCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhhHH-HHHhccCCCCceEEEeccccCcchHHHHHc------
Confidence            4789999999999999999999999999999998865433222 22111 112478999999999988877765      


Q ss_pred             CCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccc-cccCCcccccc
Q 019722          113 LPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHS-WFSGDMIRYLG  191 (336)
Q Consensus       113 ~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~-~~~~~~~~~~~  191 (336)
                       ++|+|||+|+.....   ..+..++.+++|+.++..+++++....   +     ..++|++||.++. ++.... ....
T Consensus        76 -~~d~Vih~A~~~~~~---~~~~~~~~~~~nv~gt~~ll~a~~~~~---~-----~~~~v~~SS~~~~~y~~~~~-~~~~  142 (322)
T PLN02662         76 -GCEGVFHTASPFYHD---VTDPQAELIDPAVKGTLNVLRSCAKVP---S-----VKRVVVTSSMAAVAYNGKPL-TPDV  142 (322)
T ss_pred             -CCCEEEEeCCcccCC---CCChHHHHHHHHHHHHHHHHHHHHhCC---C-----CCEEEEccCHHHhcCCCcCC-CCCC
Confidence             589999999965321   112234788999999999999876531   1     2599999997542 221100 0000


Q ss_pred             cccCCCCCCC-----hhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHHHHHHH-----
Q 019722          192 QISRNKSHYD-----ATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLT-----  261 (336)
Q Consensus       192 ~~~~~~~~~~-----~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~-----  261 (336)
                      ...++....+     ....|+.+|.+.+.+++.+.++.   +  ++++.++|+.+.++.................     
T Consensus       143 ~~~E~~~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~--~~~~~lRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~  217 (322)
T PLN02662        143 VVDETWFSDPAFCEESKLWYVLSKTLAEEAAWKFAKEN---G--IDMVTINPAMVIGPLLQPTLNTSAEAILNLINGAQT  217 (322)
T ss_pred             cCCcccCCChhHhhcccchHHHHHHHHHHHHHHHHHHc---C--CcEEEEeCCcccCCCCCCCCCchHHHHHHHhcCCcc
Confidence            0111100011     12469999999999988877653   3  9999999999999875432111111111111     


Q ss_pred             ----HhhcCChHHHHHHHHHHHhcCccccCCceeec
Q 019722          262 ----SKLLKTIPQGAATTCYVAIHPRLVNVSGKYFA  293 (336)
Q Consensus       262 ----~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~  293 (336)
                          ......++|+|.+++.++..+..   .|.++.
T Consensus       218 ~~~~~~~~i~v~Dva~a~~~~~~~~~~---~~~~~~  250 (322)
T PLN02662        218 FPNASYRWVDVRDVANAHIQAFEIPSA---SGRYCL  250 (322)
T ss_pred             CCCCCcCeEEHHHHHHHHHHHhcCcCc---CCcEEE
Confidence                01235568999999988875432   365544

>PLN02572 UDP-sulfoquinovose synthase

Probab=99.80  E-value=2.7e-17  Score=158.00  Aligned_cols=206  Identities=14%  Similarity=0.133  Sum_probs=142.0

Q ss_pred             CCCccccccCCCCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChH---HH-------------HHHHHHHHhh
Q 019722           19 SKSTAEQVTDGCPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLK---AA-------------EEAKARLASD   82 (336)
Q Consensus        19 ~~~~~~~~~~~~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~---~~-------------~~~~~~l~~~   82 (336)
                      ...|+..|+- ...+++|++|||||+|+||++++++|+++|++|++++|...   ..             .+.++.+...
T Consensus        32 ~~~~~~~~~~-~~~~~~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  110 (442)
T PLN02572         32 ELATPSAPGS-SSSSKKKKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEV  110 (442)
T ss_pred             cccCCCCCCC-CccccCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHHh
Confidence            3455666665 66799999999999999999999999999999999874211   00             0111111111


Q ss_pred             CCCCceEEEeccCCCHHHHHHHHHHHHhcCCCccEEEEcccCCCCC-CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHh
Q 019722           83 CPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQ-HAISEDGIEMTFATNYLGHFLLTKLLLKKMIET  161 (336)
Q Consensus        83 ~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~lv~nAg~~~~~-~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~  161 (336)
                       .+.++.++.+|++|.+++.++++..     ++|+|||+|+..... ...+.++++..+++|+.|++.+++++...-.  
T Consensus       111 -~~~~v~~v~~Dl~d~~~v~~~l~~~-----~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~gv--  182 (442)
T PLN02572        111 -SGKEIELYVGDICDFEFLSEAFKSF-----EPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFAP--  182 (442)
T ss_pred             -hCCcceEEECCCCCHHHHHHHHHhC-----CCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhCC--
Confidence             1346899999999999999988753     689999999764332 2234455677889999999999998766421  


Q ss_pred             hccCCCCCeEEEEcCCccccccCCcccccccc-------cCCC--CCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEE
Q 019722          162 AKATGIQGRIVNVSSSIHSWFSGDMIRYLGQI-------SRNK--SHYDATRAYALSKLANVLHTKELAQRLKQMEANVT  232 (336)
Q Consensus       162 ~~~~~~~grIV~vsS~~~~~~~~~~~~~~~~~-------~~~~--~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~  232 (336)
                            ..++|++||.. .++... .+.++..       .++.  ....+...|+.||.+.+.+++..++.+   |  +.
T Consensus       183 ------~~~~V~~SS~~-vYG~~~-~~~~E~~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~~---g--l~  249 (442)
T PLN02572        183 ------DCHLVKLGTMG-EYGTPN-IDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---G--IR  249 (442)
T ss_pred             ------CccEEEEecce-ecCCCC-CCCcccccccccccccccccCCCCCCCcchhHHHHHHHHHHHHHHhc---C--CC
Confidence                  14899999974 333211 0111100       0010  122334579999999999998877653   3  99


Q ss_pred             EEEeeCCceeCCCC
Q 019722          233 VNCVHPGIVRTRLT  246 (336)
Q Consensus       233 vn~v~PG~v~T~~~  246 (336)
                      +..+.|+.+.++..
T Consensus       250 ~v~lR~~~vyGp~~  263 (442)
T PLN02572        250 ATDLNQGVVYGVRT  263 (442)
T ss_pred             EEEEecccccCCCC
Confidence            99999999998864

>PLN02240 UDP-glucose 4-epimerase

Probab=99.80  E-value=5.9e-17  Score=151.39  Aligned_cols=187  Identities=19%  Similarity=0.166  Sum_probs=130.6

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhC--CCCceEEEeccCCCHHHHHHHHHHH
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDC--PGSDIVVLPLDLSSLSSVRNFVSQF  108 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~~Dl~~~~~v~~~~~~~  108 (336)
                      |+|++|+++||||+|+||.+++++|+++|++|++++|...........+....  .+.++.++.+|++++.++..+++..
T Consensus         1 ~~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~   80 (352)
T PLN02240          1 MSLMGRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFAST   80 (352)
T ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHhC
Confidence            56889999999999999999999999999999999875432222222222111  1346889999999999998887642


Q ss_pred             HhcCCCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccc
Q 019722          109 HSLNLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIR  188 (336)
Q Consensus       109 ~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~  188 (336)
                           .+|+|||+|+.....  .+.+++.+.+++|+.++..+++++..    .+     .+++|++||. +.++......
T Consensus        81 -----~~d~vih~a~~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~----~~-----~~~~v~~Ss~-~vyg~~~~~~  143 (352)
T PLN02240         81 -----RFDAVIHFAGLKAVG--ESVAKPLLYYDNNLVGTINLLEVMAK----HG-----CKKLVFSSSA-TVYGQPEEVP  143 (352)
T ss_pred             -----CCCEEEEccccCCcc--ccccCHHHHHHHHHHHHHHHHHHHHH----cC-----CCEEEEEccH-HHhCCCCCCC
Confidence                 689999999975432  23356778999999999999886533    21     2589999995 3343221111


Q ss_pred             ccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeC
Q 019722          189 YLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRT  243 (336)
Q Consensus       189 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T  243 (336)
                           .+++....+...|+.+|.+.+.+++.++.+.  .+  +.+..+.++.+..
T Consensus       144 -----~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~--~~~~~~R~~~v~G  189 (352)
T PLN02240        144 -----CTEEFPLSATNPYGRTKLFIEEICRDIHASD--PE--WKIILLRYFNPVG  189 (352)
T ss_pred             -----CCCCCCCCCCCHHHHHHHHHHHHHHHHHHhc--CC--CCEEEEeecCcCC
Confidence                 1122223445689999999999999887652  12  6777777665544

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=99.80  E-value=5.2e-18  Score=157.91  Aligned_cols=192  Identities=18%  Similarity=0.113  Sum_probs=132.6

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHH-HHHHHHHHhh--CCCCceEEEeccCCCHHHHHHHHHH
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAA-EEAKARLASD--CPGSDIVVLPLDLSSLSSVRNFVSQ  107 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~-~~~~~~l~~~--~~~~~~~~~~~Dl~~~~~v~~~~~~  107 (336)
                      .++++|++|||||+|+||++++++|+++|++|++++|+.... ....+.+...  ..+.++.++.+|++|.+++..+++.
T Consensus         2 ~~~~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~   81 (340)
T PLN02653          2 GDPPRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLDD   81 (340)
T ss_pred             CCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHHH
Confidence            478899999999999999999999999999999999875421 1112222110  1134689999999999999998886


Q ss_pred             HHhcCCCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcc
Q 019722          108 FHSLNLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMI  187 (336)
Q Consensus       108 ~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~  187 (336)
                      +     .+|+|||+|+.....  ...+..+..+++|+.++..+++++.+...+..    .-.++|++||.. .++.... 
T Consensus        82 ~-----~~d~Vih~A~~~~~~--~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~----~~~~~v~~Ss~~-vyg~~~~-  148 (340)
T PLN02653         82 I-----KPDEVYNLAAQSHVA--VSFEMPDYTADVVATGALRLLEAVRLHGQETG----RQIKYYQAGSSE-MYGSTPP-  148 (340)
T ss_pred             c-----CCCEEEECCcccchh--hhhhChhHHHHHHHHHHHHHHHHHHHhccccc----cceeEEEeccHH-HhCCCCC-
Confidence            4     589999999975432  12344567789999999999999988765321    012788888753 3332111 


Q ss_pred             cccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCC-CcEEEEEeeCCc
Q 019722          188 RYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQME-ANVTVNCVHPGI  240 (336)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g-~~I~vn~v~PG~  240 (336)
                      +     ..++....+...|+.||.+.+.+++.++.+++..- ..+.+|.+.|+.
T Consensus       149 ~-----~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~  197 (340)
T PLN02653        149 P-----QSETTPFHPRSPYAVAKVAAHWYTVNYREAYGLFACNGILFNHESPRR  197 (340)
T ss_pred             C-----CCCCCCCCCCChhHHHHHHHHHHHHHHHHHcCCeEEEeeeccccCCCC
Confidence            1     11122233456799999999999999988764210 124455566654

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=99.79  E-value=9.6e-18  Score=151.58  Aligned_cols=260  Identities=13%  Similarity=0.007  Sum_probs=171.6

Q ss_pred             EEeCCCChHHHHHHHHHHHCC--CEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCCCcc
Q 019722           39 IITGATSGIGAETARVLAKRG--ARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLPLN  116 (336)
Q Consensus        39 lItGgs~gIG~aia~~L~~~G--~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id  116 (336)
                      |||||+|.||.+++++|+++|  ++|.++++.......  ..+..   .....++++|++|.+++.++++       +.|
T Consensus         1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~~--~~~~~---~~~~~~~~~Di~d~~~l~~a~~-------g~d   68 (280)
T PF01073_consen    1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKFL--KDLQK---SGVKEYIQGDITDPESLEEALE-------GVD   68 (280)
T ss_pred             CEEcCCcHHHHHHHHHHHHCCCceEEEEcccccccccc--hhhhc---ccceeEEEeccccHHHHHHHhc-------CCc
Confidence            699999999999999999999  689998887654221  11111   1233499999999999999887       689


Q ss_pred             EEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcccccccccCC
Q 019722          117 LLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRN  196 (336)
Q Consensus       117 ~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~~~~~~  196 (336)
                      ++||+|++.....   ....++++++|+.|+-.+++++...    +     -.|+|++||...........++.......
T Consensus        69 ~V~H~Aa~~~~~~---~~~~~~~~~vNV~GT~nvl~aa~~~----~-----VkrlVytSS~~vv~~~~~~~~~~~~dE~~  136 (280)
T PF01073_consen   69 VVFHTAAPVPPWG---DYPPEEYYKVNVDGTRNVLEAARKA----G-----VKRLVYTSSISVVFDNYKGDPIINGDEDT  136 (280)
T ss_pred             eEEEeCccccccC---cccHHHHHHHHHHHHHHHHHHHHHc----C-----CCEEEEEcCcceeEeccCCCCcccCCcCC
Confidence            9999999765432   4556789999999999999988753    1     25999999987654311111111111111


Q ss_pred             CCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHHHHHH-HH---------hhcC
Q 019722          197 KSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFL-TS---------KLLK  266 (336)
Q Consensus       197 ~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~-~~---------~~~~  266 (336)
                      .........|+.||+..|.++......-...|..++..+|+|..|..|..........+..... ..         ....
T Consensus       137 ~~~~~~~~~Y~~SK~~AE~~V~~a~~~~~~~g~~l~t~~lRP~~IyGp~d~~~~~~~~~~~~~g~~~~~~g~~~~~~~~v  216 (280)
T PF01073_consen  137 PYPSSPLDPYAESKALAEKAVLEANGSELKNGGRLRTCALRPAGIYGPGDQRLVPRLVKMVRSGLFLFQIGDGNNLFDFV  216 (280)
T ss_pred             cccccccCchHHHHHHHHHHHHhhcccccccccceeEEEEeccEEeCcccccccchhhHHHHhcccceeecCCCceECcE
Confidence            1122355579999999999988866511122335999999999999986555433222222211 00         0112


Q ss_pred             ChHHHHHHHHHHHh--cCc--cccCCceeeccCcccccccCCCCHHHHHHHHHHHHHhhccCCCCCC
Q 019722          267 TIPQGAATTCYVAI--HPR--LVNVSGKYFADCNEAWTSKLGSNSNEASRLWAASELLVSRDPKSVF  329 (336)
Q Consensus       267 ~~~~~a~~~~~l~~--~~~--~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~  329 (336)
                      .++++|.+.+..+.  .+.  ...+.|+.|...+......       ..++|..+.+.+|.+++.+|
T Consensus       217 yV~NvA~ahvlA~~~L~~~~~~~~~~G~~y~itd~~p~~~-------~~~f~~~~~~~~G~~~~~~~  276 (280)
T PF01073_consen  217 YVENVAHAHVLAAQALLEPGKPERVAGQAYFITDGEPVPS-------FWDFMRPLWEALGYPPPKSI  276 (280)
T ss_pred             eHHHHHHHHHHHHHHhccccccccCCCcEEEEECCCccCc-------HHHHHHHHHHHCCCCCCccc
Confidence            35777877765532  111  2446886665665544441       37788888899998888743

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=99.78  E-value=9.4e-17  Score=150.27  Aligned_cols=229  Identities=17%  Similarity=0.090  Sum_probs=151.6

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHh
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHS  110 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  110 (336)
                      .+-+++++|||||+|.||++++++|+++|++|++++|+.+........+..   +.++.++.+|+++.+++.++++    
T Consensus         6 ~~~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~----   78 (353)
T PLN02896          6 RESATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKE---GDRLRLFRADLQEEGSFDEAVK----   78 (353)
T ss_pred             cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhcc---CCeEEEEECCCCCHHHHHHHHc----
Confidence            345678999999999999999999999999999999987766555444322   3578899999999998887764    


Q ss_pred             cCCCccEEEEcccCCCCCCC---CCchhh--hhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCC
Q 019722          111 LNLPLNLLINNAGKFAHQHA---ISEDGI--EMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGD  185 (336)
Q Consensus       111 ~~~~id~lv~nAg~~~~~~~---~~~~~~--~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~  185 (336)
                         .+|+|||+|+.......   .+.+.+  ...++.|+.+...+++++.+...        .+++|++||.......+.
T Consensus        79 ---~~d~Vih~A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~~--------~~~~v~~SS~~vyg~~~~  147 (353)
T PLN02896         79 ---GCDGVFHVAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSKT--------VKRVVFTSSISTLTAKDS  147 (353)
T ss_pred             ---CCCEEEECCccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcCC--------ccEEEEEechhhcccccc
Confidence               58999999997543321   122222  24566777999999998876421        258999999754321111


Q ss_pred             c----ccccccccCCC----CCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCcc-chhHHHH
Q 019722          186 M----IRYLGQISRNK----SHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRER-EGFITDL  256 (336)
Q Consensus       186 ~----~~~~~~~~~~~----~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~-~~~~~~~  256 (336)
                      .    ...++......    ...+....|+.||.+.+.+++.++++.   +  +++..+.|+.+.+|..... .......
T Consensus       148 ~~~~~~~~~E~~~~p~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~--~~~~~lR~~~vyGp~~~~~~~~~~~~~  222 (353)
T PLN02896        148 NGRWRAVVDETCQTPIDHVWNTKASGWVYVLSKLLTEEAAFKYAKEN---G--IDLVSVITTTVAGPFLTPSVPSSIQVL  222 (353)
T ss_pred             CCCCCCccCcccCCcHHHhhccCCCCccHHHHHHHHHHHHHHHHHHc---C--CeEEEEcCCcccCCCcCCCCCchHHHH
Confidence            0    01111100000    001233479999999999999887664   3  9999999999998864321 1111111


Q ss_pred             HHHHHH-----------------hhcCChHHHHHHHHHHHhcC
Q 019722          257 VFFLTS-----------------KLLKTIPQGAATTCYVAIHP  282 (336)
Q Consensus       257 ~~~~~~-----------------~~~~~~~~~a~~~~~l~~~~  282 (336)
                      ...+..                 .....++|.+.+++.++..+
T Consensus       223 ~~~~~g~~~~~~~~~~~~~~~~~~dfi~v~Dva~a~~~~l~~~  265 (353)
T PLN02896        223 LSPITGDSKLFSILSAVNSRMGSIALVHIEDICDAHIFLMEQT  265 (353)
T ss_pred             HHHhcCCccccccccccccccCceeEEeHHHHHHHHHHHHhCC
Confidence            111000                 02346789999998888643

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=99.77  E-value=1.4e-16  Score=149.22  Aligned_cols=241  Identities=13%  Similarity=0.075  Sum_probs=152.8

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEE-EeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCCC
Q 019722           36 VTAIITGATSGIGAETARVLAKRGARLV-LPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLP  114 (336)
Q Consensus        36 k~~lItGgs~gIG~aia~~L~~~G~~V~-~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  114 (336)
                      |++|||||+|+||.+++++|+++|++++ +++|.... .. ...+....+..++.++.+|++|.++++++++.     .+
T Consensus         2 ~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-----~~   74 (355)
T PRK10217          2 RKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYA-GN-LMSLAPVAQSERFAFEKVDICDRAELARVFTE-----HQ   74 (355)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCccc-cc-hhhhhhcccCCceEEEECCCcChHHHHHHHhh-----cC
Confidence            5899999999999999999999998644 45554321 11 11111111234688899999999999888775     26


Q ss_pred             ccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccccccccc
Q 019722          115 LNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQIS  194 (336)
Q Consensus       115 id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~~~~  194 (336)
                      +|+|||+||....  ..+.+.+++.+++|+.+++.+++++.+.+...........++|++||... ++....   ...+.
T Consensus        75 ~D~Vih~A~~~~~--~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~v-yg~~~~---~~~~~  148 (355)
T PRK10217         75 PDCVMHLAAESHV--DRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEV-YGDLHS---TDDFF  148 (355)
T ss_pred             CCEEEECCcccCc--chhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhh-cCCCCC---CCCCc
Confidence            9999999996532  22345678899999999999999998764311000000248999988642 221100   00011


Q ss_pred             CCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHHHHHHHH------------
Q 019722          195 RNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTS------------  262 (336)
Q Consensus       195 ~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~------------  262 (336)
                      +++....+...|+.||.+.+.+++.+++++.     +++..+.|+.+..+-... .............            
T Consensus       149 ~E~~~~~p~s~Y~~sK~~~e~~~~~~~~~~~-----~~~~i~r~~~v~Gp~~~~-~~~~~~~~~~~~~~~~~~~~g~g~~  222 (355)
T PRK10217        149 TETTPYAPSSPYSASKASSDHLVRAWLRTYG-----LPTLITNCSNNYGPYHFP-EKLIPLMILNALAGKPLPVYGNGQQ  222 (355)
T ss_pred             CCCCCCCCCChhHHHHHHHHHHHHHHHHHhC-----CCeEEEeeeeeeCCCCCc-ccHHHHHHHHHhcCCCceEeCCCCe
Confidence            1122233456799999999999999987753     788889999998875422 1122222111111            


Q ss_pred             -hhcCChHHHHHHHHHHHhcCccccCCceeeccCcccc
Q 019722          263 -KLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAW  299 (336)
Q Consensus       263 -~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  299 (336)
                       .....++|.+.++..++..+    ..|..|+..+...
T Consensus       223 ~~~~i~v~D~a~a~~~~~~~~----~~~~~yni~~~~~  256 (355)
T PRK10217        223 IRDWLYVEDHARALYCVATTG----KVGETYNIGGHNE  256 (355)
T ss_pred             eeCcCcHHHHHHHHHHHHhcC----CCCCeEEeCCCCc
Confidence             11245688888887777632    2455565555543

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=99.75  E-value=1.1e-16  Score=149.15  Aligned_cols=171  Identities=18%  Similarity=0.118  Sum_probs=119.5

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHH-HHHHHHHHhh---CCCCceEEEeccCCCHHHHHHHHHHHHhc
Q 019722           36 VTAIITGATSGIGAETARVLAKRGARLVLPARSLKAA-EEAKARLASD---CPGSDIVVLPLDLSSLSSVRNFVSQFHSL  111 (336)
Q Consensus        36 k~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~-~~~~~~l~~~---~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  111 (336)
                      |++|||||+|+||++++++|+++|++|++++|+.+.. ......+...   ..+.++.++++|++|.+++.++++.+   
T Consensus         1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~---   77 (343)
T TIGR01472         1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEI---   77 (343)
T ss_pred             CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhC---
Confidence            6899999999999999999999999999999875421 1111111111   01246899999999999999888754   


Q ss_pred             CCCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcccccc
Q 019722          112 NLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLG  191 (336)
Q Consensus       112 ~~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~  191 (336)
                        ++|+|||+|+......  ..+.....+++|+.++..+++++.+.-.+.      ..++|++||.. .++......   
T Consensus        78 --~~d~ViH~Aa~~~~~~--~~~~~~~~~~~n~~gt~~ll~a~~~~~~~~------~~~~v~~SS~~-vyg~~~~~~---  143 (343)
T TIGR01472        78 --KPTEIYNLAAQSHVKV--SFEIPEYTADVDGIGTLRLLEAVRTLGLIK------SVKFYQASTSE-LYGKVQEIP---  143 (343)
T ss_pred             --CCCEEEECCcccccch--hhhChHHHHHHHHHHHHHHHHHHHHhCCCc------CeeEEEeccHH-hhCCCCCCC---
Confidence              5899999999754321  222335677899999999999988742111      13789998863 333211111   


Q ss_pred             cccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHc
Q 019722          192 QISRNKSHYDATRAYALSKLANVLHTKELAQRLK  225 (336)
Q Consensus       192 ~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~  225 (336)
                        ..++....+...|+.||.+.+.+++.++.++.
T Consensus       144 --~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~  175 (343)
T TIGR01472       144 --QNETTPFYPRSPYAAAKLYAHWITVNYREAYG  175 (343)
T ss_pred             --CCCCCCCCCCChhHHHHHHHHHHHHHHHHHhC
Confidence              11222234556899999999999999988764

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.75  E-value=2.3e-16  Score=149.24  Aligned_cols=223  Identities=16%  Similarity=0.113  Sum_probs=177.8

Q ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHh
Q 019722           32 NLSSVTAIITGATSGIGAETARVLAKRGA-RLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHS  110 (336)
Q Consensus        32 ~l~gk~~lItGgs~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  110 (336)
                      -++||++|||||+|.||+++++++++.+. ++++.+|++.+.-....+++..++..++.++-+|+.|.+.+..+++..  
T Consensus       247 ~~~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~~--  324 (588)
T COG1086         247 MLTGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAMEGH--  324 (588)
T ss_pred             HcCCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHHHHHhcC--
Confidence            47999999999999999999999999997 899999999999999999999888889999999999999999999843  


Q ss_pred             cCCCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccccc
Q 019722          111 LNLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYL  190 (336)
Q Consensus       111 ~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~  190 (336)
                         ++|+++|.|+.-+-+  .-+.+..+.+..|+.|+.++++++...-.         .++|++|+--+..+        
T Consensus       325 ---kvd~VfHAAA~KHVP--l~E~nP~Eai~tNV~GT~nv~~aa~~~~V---------~~~V~iSTDKAV~P--------  382 (588)
T COG1086         325 ---KVDIVFHAAALKHVP--LVEYNPEEAIKTNVLGTENVAEAAIKNGV---------KKFVLISTDKAVNP--------  382 (588)
T ss_pred             ---CCceEEEhhhhccCc--chhcCHHHHHHHhhHhHHHHHHHHHHhCC---------CEEEEEecCcccCC--------
Confidence               699999999965443  24566788999999999999999988754         38999999655443        


Q ss_pred             ccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHHHHHHH---------
Q 019722          191 GQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLT---------  261 (336)
Q Consensus       191 ~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~---------  261 (336)
                                  ...||++|...+.++.+++......+  -++.+|.=|.|-.....=.+ .+.++.++-.         
T Consensus       383 ------------tNvmGaTKr~aE~~~~a~~~~~~~~~--T~f~~VRFGNVlGSrGSViP-lFk~QI~~GgplTvTdp~m  447 (588)
T COG1086         383 ------------TNVMGATKRLAEKLFQAANRNVSGTG--TRFCVVRFGNVLGSRGSVIP-LFKKQIAEGGPLTVTDPDM  447 (588)
T ss_pred             ------------chHhhHHHHHHHHHHHHHhhccCCCC--cEEEEEEecceecCCCCCHH-HHHHHHHcCCCccccCCCc
Confidence                        44799999999999999998766544  89999999999776544332 2222222211         


Q ss_pred             HhhcCChHHHHHHHHHHHhcCccccCCceeeccCcc
Q 019722          262 SKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNE  297 (336)
Q Consensus       262 ~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~  297 (336)
                      ..+..+.+|+++.++.....    ...|..|..+-+
T Consensus       448 tRyfMTI~EAv~LVlqA~a~----~~gGeifvldMG  479 (588)
T COG1086         448 TRFFMTIPEAVQLVLQAGAI----AKGGEIFVLDMG  479 (588)
T ss_pred             eeEEEEHHHHHHHHHHHHhh----cCCCcEEEEcCC
Confidence            22345678989999888763    336777766653

>PLN00198 anthocyanidin reductase; Provisional

Probab=99.75  E-value=9.6e-17  Score=149.29  Aligned_cols=227  Identities=15%  Similarity=0.105  Sum_probs=148.8

Q ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhc
Q 019722           32 NLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSL  111 (336)
Q Consensus        32 ~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  111 (336)
                      .+.++++|||||+|+||++++++|+++|++|+++.|+......... +.......++.++.+|+++.+++..+++     
T Consensus         6 ~~~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-----   79 (338)
T PLN00198          6 PTGKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAH-LRALQELGDLKIFGADLTDEESFEAPIA-----   79 (338)
T ss_pred             CCCCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHH-HHhcCCCCceEEEEcCCCChHHHHHHHh-----
Confidence            3568999999999999999999999999999988888654332211 1111001368899999999988887765     


Q ss_pred             CCCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccC---Cccc
Q 019722          112 NLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSG---DMIR  188 (336)
Q Consensus       112 ~~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~---~~~~  188 (336)
                        ++|++||+|+.....   ..+.....+++|+.+...+++++....   .     .+++|++||.+......   ....
T Consensus        80 --~~d~vih~A~~~~~~---~~~~~~~~~~~nv~g~~~ll~a~~~~~---~-----~~~~v~~SS~~~~g~~~~~~~~~~  146 (338)
T PLN00198         80 --GCDLVFHVATPVNFA---SEDPENDMIKPAIQGVHNVLKACAKAK---S-----VKRVILTSSAAAVSINKLSGTGLV  146 (338)
T ss_pred             --cCCEEEEeCCCCccC---CCChHHHHHHHHHHHHHHHHHHHHhcC---C-----ccEEEEeecceeeeccCCCCCCce
Confidence              589999999853211   223345678999999999999987642   1     25999999975432110   0011


Q ss_pred             ccccccCC----CCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCcc-chhHHHHHHHHH--
Q 019722          189 YLGQISRN----KSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRER-EGFITDLVFFLT--  261 (336)
Q Consensus       189 ~~~~~~~~----~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~-~~~~~~~~~~~~--  261 (336)
                      .++.....    ....++...|+.||.+.+.+++.++.+.   +  ++++.+.|+.|.+|..... ............  
T Consensus       147 ~~E~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~--~~~~~~R~~~vyGp~~~~~~~~~~~~~~~~~~~~  221 (338)
T PLN00198        147 MNEKNWTDVEFLTSEKPPTWGYPASKTLAEKAAWKFAEEN---N--IDLITVIPTLMAGPSLTSDIPSSLSLAMSLITGN  221 (338)
T ss_pred             eccccCCchhhhhhcCCccchhHHHHHHHHHHHHHHHHhc---C--ceEEEEeCCceECCCccCCCCCcHHHHHHHHcCC
Confidence            11111000    0012345579999999999999887653   4  9999999999998864321 111110000000  


Q ss_pred             ---------------HhhcCChHHHHHHHHHHHhcC
Q 019722          262 ---------------SKLLKTIPQGAATTCYVAIHP  282 (336)
Q Consensus       262 ---------------~~~~~~~~~~a~~~~~l~~~~  282 (336)
                                     ......++|.+.+++.++..+
T Consensus       222 ~~~~~g~~~~~~~~~~~~~i~V~D~a~a~~~~~~~~  257 (338)
T PLN00198        222 EFLINGLKGMQMLSGSISITHVEDVCRAHIFLAEKE  257 (338)
T ss_pred             ccccccccccccccCCcceeEHHHHHHHHHHHhhCc
Confidence                           013356788899988888743

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=99.75  E-value=4.4e-16  Score=142.96  Aligned_cols=229  Identities=13%  Similarity=0.066  Sum_probs=149.4

Q ss_pred             EEEEeCCCChHHHHHHHHHHHCC--CEEEEeeCChHH-HHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCC
Q 019722           37 TAIITGATSGIGAETARVLAKRG--ARLVLPARSLKA-AEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNL  113 (336)
Q Consensus        37 ~~lItGgs~gIG~aia~~L~~~G--~~V~~~~r~~~~-~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  113 (336)
                      +++||||+|+||.+++++|+++|  ++|++++|.... ..+..+.+..   ..++.++.+|+++++++.++++..     
T Consensus         1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~-----   72 (317)
T TIGR01181         1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLED---NPRYRFVKGDIGDRELVSRLFTEH-----   72 (317)
T ss_pred             CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhcc---CCCcEEEEcCCcCHHHHHHHHhhc-----
Confidence            48999999999999999999987  689888764311 1111222211   246888999999999998888753     


Q ss_pred             CccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcccccccc
Q 019722          114 PLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQI  193 (336)
Q Consensus       114 ~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~~~  193 (336)
                      ++|+|||+|+.....  .+.+..+..+++|+.+...+++++...+.        ..++|++||... ++.....   . .
T Consensus        73 ~~d~vi~~a~~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--------~~~~i~~Ss~~v-~g~~~~~---~-~  137 (317)
T TIGR01181        73 QPDAVVHFAAESHVD--RSISGPAAFIETNVVGTYTLLEAVRKYWH--------EFRFHHISTDEV-YGDLEKG---D-A  137 (317)
T ss_pred             CCCEEEEcccccCch--hhhhCHHHHHHHHHHHHHHHHHHHHhcCC--------CceEEEeeccce-eCCCCCC---C-C
Confidence            589999999975432  23345678899999999999988766532        248999998542 2211100   0 0


Q ss_pred             cCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHHHHHHHHh----------
Q 019722          194 SRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSK----------  263 (336)
Q Consensus       194 ~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~----------  263 (336)
                      ..+.....+...|+.+|.+.+.+++.++.+..     +++..+.|+.+..+..... ...+.........          
T Consensus       138 ~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~-----~~~~i~R~~~i~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~  211 (317)
T TIGR01181       138 FTETTPLAPSSPYSASKAASDHLVRAYHRTYG-----LPALITRCSNNYGPYQFPE-KLIPLMITNALAGKPLPVYGDGQ  211 (317)
T ss_pred             cCCCCCCCCCCchHHHHHHHHHHHHHHHHHhC-----CCeEEEEeccccCCCCCcc-cHHHHHHHHHhcCCCceEeCCCc
Confidence            11111133345799999999999999887643     8999999999988754321 2222222222111          


Q ss_pred             ---hcCChHHHHHHHHHHHhcCccccCCceeeccCccc
Q 019722          264 ---LLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEA  298 (336)
Q Consensus       264 ---~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  298 (336)
                         .....+|.+.++..++..+    ..|+.|+..+..
T Consensus       212 ~~~~~i~v~D~a~~~~~~~~~~----~~~~~~~~~~~~  245 (317)
T TIGR01181       212 QVRDWLYVEDHCRAIYLVLEKG----RVGETYNIGGGN  245 (317)
T ss_pred             eEEeeEEHHHHHHHHHHHHcCC----CCCceEEeCCCC
Confidence               1123578888887777532    245555555443

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=99.74  E-value=6.2e-16  Score=142.79  Aligned_cols=222  Identities=21%  Similarity=0.161  Sum_probs=146.8

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCCCc
Q 019722           36 VTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLPL  115 (336)
Q Consensus        36 k~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i  115 (336)
                      ++++||||+|+||.++++.|+++|++|++++|+++.....    .    ...+.++.+|+++.+++.++++       .+
T Consensus         1 ~~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~----~~~~~~~~~D~~~~~~l~~~~~-------~~   65 (328)
T TIGR03466         1 MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRNL----E----GLDVEIVEGDLRDPASLRKAVA-------GC   65 (328)
T ss_pred             CeEEEECCccchhHHHHHHHHHCCCEEEEEEecCcccccc----c----cCCceEEEeeCCCHHHHHHHHh-------CC
Confidence            3689999999999999999999999999999986643211    1    2368899999999998888775       58


Q ss_pred             cEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcccccccccC
Q 019722          116 NLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISR  195 (336)
Q Consensus       116 d~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~~~~~  195 (336)
                      |++||+|+....    ..+++++.+++|+.++..+++++...    .     .+++|++||...........++++.  .
T Consensus        66 d~vi~~a~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~----~-----~~~~v~~SS~~~~~~~~~~~~~~e~--~  130 (328)
T TIGR03466        66 RALFHVAADYRL----WAPDPEEMYAANVEGTRNLLRAALEA----G-----VERVVYTSSVATLGVRGDGTPADET--T  130 (328)
T ss_pred             CEEEEeceeccc----CCCCHHHHHHHHHHHHHHHHHHHHHh----C-----CCeEEEEechhhcCcCCCCCCcCcc--C
Confidence            999999985422    22446788999999999998887642    1     2599999997543211111111110  0


Q ss_pred             CCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHHHHHHHH---------hhcC
Q 019722          196 NKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTS---------KLLK  266 (336)
Q Consensus       196 ~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~---------~~~~  266 (336)
                      ..........|+.+|.+.+.+++.++.+.   +  +++..+.|+.+.++..................         ....
T Consensus       131 ~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~--~~~~ilR~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  205 (328)
T TIGR03466       131 PSSLDDMIGHYKRSKFLAEQAALEMAAEK---G--LPVVIVNPSTPIGPRDIKPTPTGRIIVDFLNGKMPAYVDTGLNLV  205 (328)
T ss_pred             CCCcccccChHHHHHHHHHHHHHHHHHhc---C--CCEEEEeCCccCCCCCCCCCcHHHHHHHHHcCCCceeeCCCcceE
Confidence            00001123469999999999999887653   4  89999999999876533211110011111100         0123


Q ss_pred             ChHHHHHHHHHHHhcCccccCCceeeccCc
Q 019722          267 TIPQGAATTCYVAIHPRLVNVSGKYFADCN  296 (336)
Q Consensus       267 ~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~  296 (336)
                      ..+|.+.+++.++..+    ..|..+...+
T Consensus       206 ~v~D~a~a~~~~~~~~----~~~~~~~~~~  231 (328)
T TIGR03466       206 HVDDVAEGHLLALERG----RIGERYILGG  231 (328)
T ss_pred             EHHHHHHHHHHHHhCC----CCCceEEecC
Confidence            5788888888777632    2566665544

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>PLN02686 cinnamoyl-CoA reductase

Probab=99.74  E-value=1.1e-15  Score=143.80  Aligned_cols=269  Identities=12%  Similarity=0.025  Sum_probs=165.4

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhC----CCCceEEEeccCCCHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDC----PGSDIVVLPLDLSSLSSVRNFV  105 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~----~~~~~~~~~~Dl~~~~~v~~~~  105 (336)
                      ..++++|++|||||+|+||.+++++|+++|++|+++.|+.+..+.+ +++....    .+.++.++.+|++|.+++.+++
T Consensus        48 ~~~~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l-~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i  126 (367)
T PLN02686         48 GADAEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKL-REMEMFGEMGRSNDGIWTVMANLTEPESLHEAF  126 (367)
T ss_pred             ccCCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHHhhhccccccCCceEEEEcCCCCHHHHHHHH
Confidence            4568899999999999999999999999999999989987655443 2332110    0135888999999999998887


Q ss_pred             HHHHhcCCCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCc-ccccc-
Q 019722          106 SQFHSLNLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSI-HSWFS-  183 (336)
Q Consensus       106 ~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~-~~~~~-  183 (336)
                      +       .+|.+||.|+........  .......++|+.+...+++++...-   +     -.++|++||.. ..++. 
T Consensus       127 ~-------~~d~V~hlA~~~~~~~~~--~~~~~~~~~nv~gt~~llea~~~~~---~-----v~r~V~~SS~~~~vyg~~  189 (367)
T PLN02686        127 D-------GCAGVFHTSAFVDPAGLS--GYTKSMAELEAKASENVIEACVRTE---S-----VRKCVFTSSLLACVWRQN  189 (367)
T ss_pred             H-------hccEEEecCeeecccccc--cccchhhhhhHHHHHHHHHHHHhcC---C-----ccEEEEeccHHHhccccc
Confidence            6       468999998865432111  1113456778888888888765421   1     24899999964 22221 


Q ss_pred             -CCcc--cccccc-cCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCcc-chhHHHHHH
Q 019722          184 -GDMI--RYLGQI-SRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRER-EGFITDLVF  258 (336)
Q Consensus       184 -~~~~--~~~~~~-~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~-~~~~~~~~~  258 (336)
                       +...  .++... ............|+.||.+.+.+++.++++.   |  ++++.|+|+.|.+|..... .........
T Consensus       190 ~~~~~~~~i~E~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---g--l~~v~lRp~~vyGp~~~~~~~~~~~~~~~  264 (367)
T PLN02686        190 YPHDLPPVIDEESWSDESFCRDNKLWYALGKLKAEKAAWRAARGK---G--LKLATICPALVTGPGFFRRNSTATIAYLK  264 (367)
T ss_pred             CCCCCCcccCCCCCCChhhcccccchHHHHHHHHHHHHHHHHHhc---C--ceEEEEcCCceECCCCCCCCChhHHHHhc
Confidence             0000  011000 0000112234469999999999999887653   4  9999999999999964321 111111110


Q ss_pred             ----HHHH--hhcCChHHHHHHHHHHHhcCccccCCceeeccCcccccccCCCCHHHHHHHHHHHHHhhccCCCCCCCC
Q 019722          259 ----FLTS--KLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWTSKLGSNSNEASRLWAASELLVSRDPKSVFDP  331 (336)
Q Consensus       259 ----~~~~--~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~p  331 (336)
                          ....  .....++|++.+++.++..+......|.|+ ..+ ...+        ..++.+.+.++++.+....+.|
T Consensus       265 g~~~~~g~g~~~~v~V~Dva~A~~~al~~~~~~~~~~~yi-~~g-~~~s--------~~e~~~~i~~~~g~~~~~~~~~  333 (367)
T PLN02686        265 GAQEMLADGLLATADVERLAEAHVCVYEAMGNKTAFGRYI-CFD-HVVS--------REDEAEELARQIGLPINKIAGN  333 (367)
T ss_pred             CCCccCCCCCcCeEEHHHHHHHHHHHHhccCCCCCCCcEE-EeC-CCcc--------HHHHHHHHHHHcCCCCCcCCCc
Confidence                0000  113457888998888876321111233453 222 2223        2667777777777655444444

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=99.72  E-value=2.2e-15  Score=140.70  Aligned_cols=239  Identities=13%  Similarity=0.049  Sum_probs=154.1

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhh---CCCCceEEEeccCCCHHHHHHHHHH
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASD---CPGSDIVVLPLDLSSLSSVRNFVSQ  107 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~---~~~~~~~~~~~Dl~~~~~v~~~~~~  107 (336)
                      .-+++|++|||||+|.||.+++++|+++|++|++++|...........+...   ....++.++.+|+.+...+..+++ 
T Consensus        11 ~~~~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~-   89 (348)
T PRK15181         11 LVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACK-   89 (348)
T ss_pred             ccccCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhh-
Confidence            4478899999999999999999999999999999998654322222222111   112468899999999888777765 


Q ss_pred             HHhcCCCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcc
Q 019722          108 FHSLNLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMI  187 (336)
Q Consensus       108 ~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~  187 (336)
                            .+|+|||.|+......  ..++....+++|+.++..+++++...    +     -.++|++||.. .++.....
T Consensus        90 ------~~d~ViHlAa~~~~~~--~~~~~~~~~~~Nv~gt~nll~~~~~~----~-----~~~~v~~SS~~-vyg~~~~~  151 (348)
T PRK15181         90 ------NVDYVLHQAALGSVPR--SLKDPIATNSANIDGFLNMLTAARDA----H-----VSSFTYAASSS-TYGDHPDL  151 (348)
T ss_pred             ------CCCEEEECccccCchh--hhhCHHHHHHHHHHHHHHHHHHHHHc----C-----CCeEEEeechH-hhCCCCCC
Confidence                  4899999999654321  22334567999999999999887532    1     25899999863 33211111


Q ss_pred             cccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCcc---chhHHHHHHHHHH--
Q 019722          188 RYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRER---EGFITDLVFFLTS--  262 (336)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~---~~~~~~~~~~~~~--  262 (336)
                      ...    + .....+...|+.+|.+.+.+++.++...   +  +++..+.|+.+.+|.....   ....+.+......  
T Consensus       152 ~~~----e-~~~~~p~~~Y~~sK~~~e~~~~~~~~~~---~--~~~~~lR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~~  221 (348)
T PRK15181        152 PKI----E-ERIGRPLSPYAVTKYVNELYADVFARSY---E--FNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDE  221 (348)
T ss_pred             CCC----C-CCCCCCCChhhHHHHHHHHHHHHHHHHh---C--CCEEEEEecceeCcCCCCCCccccCHHHHHHHHHcCC
Confidence            111    1 1112234579999999999988876553   4  9999999999998854321   1122222222111  


Q ss_pred             -----------hhcCChHHHHHHHHHHHhcCccccCCceeeccCcccc
Q 019722          263 -----------KLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAW  299 (336)
Q Consensus       263 -----------~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  299 (336)
                                 ......+|.+.+++.++..+.. ...|..|+..++..
T Consensus       222 ~i~~~g~g~~~rd~i~v~D~a~a~~~~~~~~~~-~~~~~~yni~~g~~  268 (348)
T PRK15181        222 PIYINGDGSTSRDFCYIENVIQANLLSATTNDL-ASKNKVYNVAVGDR  268 (348)
T ss_pred             CcEEeCCCCceEeeEEHHHHHHHHHHHHhcccc-cCCCCEEEecCCCc
Confidence                       0112357888888776643221 12456666655543

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=99.71  E-value=3.3e-15  Score=139.68  Aligned_cols=242  Identities=12%  Similarity=0.057  Sum_probs=149.8

Q ss_pred             EEEEeCCCChHHHHHHHHHHHCCCE-EEEeeCCh--HHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCC
Q 019722           37 TAIITGATSGIGAETARVLAKRGAR-LVLPARSL--KAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNL  113 (336)
Q Consensus        37 ~~lItGgs~gIG~aia~~L~~~G~~-V~~~~r~~--~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  113 (336)
                      ++|||||+|+||.+++++|+++|.+ |+.+++..  ...+. ...+   .++.++.++.+|++|.+++.+++++.     
T Consensus         2 kilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~-~~~~---~~~~~~~~~~~Dl~d~~~~~~~~~~~-----   72 (352)
T PRK10084          2 KILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLES-LADV---SDSERYVFEHADICDRAELDRIFAQH-----   72 (352)
T ss_pred             eEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccchHHH-HHhc---ccCCceEEEEecCCCHHHHHHHHHhc-----
Confidence            5899999999999999999999975 55555432  11111 1111   12346888999999999998888752     


Q ss_pred             CccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCC-cccc---
Q 019722          114 PLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGD-MIRY---  189 (336)
Q Consensus       114 ~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~-~~~~---  189 (336)
                      ++|+|||+||.....  ......++.+++|+.++..+++++.+.+.+..+......++|++||... ++... ..+.   
T Consensus        73 ~~d~vih~A~~~~~~--~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~v-yg~~~~~~~~~~~  149 (352)
T PRK10084         73 QPDAVMHLAAESHVD--RSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEV-YGDLPHPDEVENS  149 (352)
T ss_pred             CCCEEEECCcccCCc--chhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhh-cCCCCcccccccc
Confidence            699999999965332  1223457889999999999999999876432110001248999988642 22110 0000   


Q ss_pred             cc-cccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHHHHHHHHh-----
Q 019722          190 LG-QISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSK-----  263 (336)
Q Consensus       190 ~~-~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~-----  263 (336)
                      .. ....++....+...|+.||.+.+.+++.++++++     +.+..+.|+.+..+.... ..............     
T Consensus       150 ~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~g-----~~~vilr~~~v~Gp~~~~-~~~~~~~~~~~~~~~~~~~  223 (352)
T PRK10084        150 EELPLFTETTAYAPSSPYSASKASSDHLVRAWLRTYG-----LPTIVTNCSNNYGPYHFP-EKLIPLVILNALEGKPLPI  223 (352)
T ss_pred             ccCCCccccCCCCCCChhHHHHHHHHHHHHHHHHHhC-----CCEEEEeccceeCCCcCc-cchHHHHHHHHhcCCCeEE
Confidence            00 0111122234455799999999999999987753     667778888888775321 11222221111110     


Q ss_pred             --------hcCChHHHHHHHHHHHhcCccccCCceeeccCccccc
Q 019722          264 --------LLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWT  300 (336)
Q Consensus       264 --------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~  300 (336)
                              ....++|.+.++..++..+    ..|..|+..+....
T Consensus       224 ~~~g~~~~~~v~v~D~a~a~~~~l~~~----~~~~~yni~~~~~~  264 (352)
T PRK10084        224 YGKGDQIRDWLYVEDHARALYKVVTEG----KAGETYNIGGHNEK  264 (352)
T ss_pred             eCCCCeEEeeEEHHHHHHHHHHHHhcC----CCCceEEeCCCCcC
Confidence                    1134578888887776532    23555655554433

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=99.70  E-value=1.6e-14  Score=134.22  Aligned_cols=181  Identities=15%  Similarity=0.121  Sum_probs=123.1

Q ss_pred             EEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCCCcc
Q 019722           37 TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLPLN  116 (336)
Q Consensus        37 ~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id  116 (336)
                      ++|||||+|+||++++++|+++|++|++++|...........+... .+.++.++.+|+++++++..+++.     .++|
T Consensus         2 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~-----~~~d   75 (338)
T PRK10675          2 RVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERL-GGKHPTFVEGDIRNEALLTEILHD-----HAID   75 (338)
T ss_pred             eEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHHHHHHh-cCCCceEEEccCCCHHHHHHHHhc-----CCCC
Confidence            5899999999999999999999999999876533222222222221 234678899999999998888763     3699


Q ss_pred             EEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcccccccccCC
Q 019722          117 LLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRN  196 (336)
Q Consensus       117 ~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~~~~~~  196 (336)
                      +|||+|+......  ..+...+.+++|+.++..+++++..    .+     .+++|++||.. .++......+++     
T Consensus        76 ~vvh~a~~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~----~~-----~~~~v~~Ss~~-~yg~~~~~~~~E-----  138 (338)
T PRK10675         76 TVIHFAGLKAVGE--SVQKPLEYYDNNVNGTLRLISAMRA----AN-----VKNLIFSSSAT-VYGDQPKIPYVE-----  138 (338)
T ss_pred             EEEECCccccccc--hhhCHHHHHHHHHHHHHHHHHHHHH----cC-----CCEEEEeccHH-hhCCCCCCcccc-----
Confidence            9999999754321  2234557889999999998876543    22     25899999964 333211111111     


Q ss_pred             CCCC-ChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCC
Q 019722          197 KSHY-DATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTR  244 (336)
Q Consensus       197 ~~~~-~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~  244 (336)
                      .... .+...|+.+|.+.+.+++.++++..  +  +++..+.++.+.++
T Consensus       139 ~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~--~--~~~~ilR~~~v~g~  183 (338)
T PRK10675        139 SFPTGTPQSPYGKSKLMVEQILTDLQKAQP--D--WSIALLRYFNPVGA  183 (338)
T ss_pred             ccCCCCCCChhHHHHHHHHHHHHHHHHhcC--C--CcEEEEEeeeecCC
Confidence            1111 2356799999999999999876532  2  77777776666543

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=99.70  E-value=7.9e-15  Score=135.17  Aligned_cols=254  Identities=14%  Similarity=0.049  Sum_probs=159.8

Q ss_pred             EEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCCCcc
Q 019722           37 TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLPLN  116 (336)
Q Consensus        37 ~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id  116 (336)
                      ++|||||+|+||.+++++|+++|++|++++|...........+..   ..++..+.+|+++++++..+++.     +++|
T Consensus         1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~-----~~~d   72 (328)
T TIGR01179         1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEALKRGER---ITRVTFVEGDLRDRELLDRLFEE-----HKID   72 (328)
T ss_pred             CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhhhhhhcc---ccceEEEECCCCCHHHHHHHHHh-----CCCc
Confidence            479999999999999999999999999887643332222222221   12678889999999999888763     3799


Q ss_pred             EEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcccccccccCC
Q 019722          117 LLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRN  196 (336)
Q Consensus       117 ~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~~~~~~  196 (336)
                      ++|||||......  ......+.+..|+.+...+++++...    +     .+++|++||... ++......+     ++
T Consensus        73 ~vv~~ag~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~----~-----~~~~v~~ss~~~-~g~~~~~~~-----~e  135 (328)
T TIGR01179        73 AVIHFAGLIAVGE--SVQDPLKYYRNNVVNTLNLLEAMQQT----G-----VKKFIFSSSAAV-YGEPSSIPI-----SE  135 (328)
T ss_pred             EEEECccccCcch--hhcCchhhhhhhHHHHHHHHHHHHhc----C-----CCEEEEecchhh-cCCCCCCCc-----cc
Confidence            9999999754321  23345678899999999998875432    1     258999888543 332111111     11


Q ss_pred             CCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCcc--------chhHHHHHHHHHH------
Q 019722          197 KSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRER--------EGFITDLVFFLTS------  262 (336)
Q Consensus       197 ~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~--------~~~~~~~~~~~~~------  262 (336)
                      .....+...|+.+|++.+.+++.++++.  .+  +++..+.|+.+.++.....        .............      
T Consensus       136 ~~~~~~~~~y~~sK~~~e~~~~~~~~~~--~~--~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  211 (328)
T TIGR01179       136 DSPLGPINPYGRSKLMSERILRDLSKAD--PG--LSYVILRYFNVAGADPEGTIGEDPPGITHLIPYACQVAVGKRDKLT  211 (328)
T ss_pred             cCCCCCCCchHHHHHHHHHHHHHHHHhc--cC--CCEEEEecCcccCCCCCCccccCCcccchHHHHHHHHHHhCCCCeE
Confidence            1123345679999999999999987652  23  8999999988877632211        1112211111110      


Q ss_pred             --------------hhcCChHHHHHHHHHHHhcCccccCCceeeccCcccccccCCCCHHHHHHHHHHHHHhhccCCCCC
Q 019722          263 --------------KLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWTSKLGSNSNEASRLWAASELLVSRDPKSV  328 (336)
Q Consensus       263 --------------~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~  328 (336)
                                    ......+|++.+++.++.... ....|+.|+..+....+-        .++.+.+.+.++...+..
T Consensus       212 ~~~~~~~~~~g~~~~~~v~~~D~a~~~~~~~~~~~-~~~~~~~~n~~~~~~~s~--------~ei~~~~~~~~g~~~~~~  282 (328)
T TIGR01179       212 IFGTDYPTPDGTCVRDYIHVMDLADAHLAALEYLL-NGGESHVYNLGYGQGFSV--------LEVIEAFKKVSGVDFPVE  282 (328)
T ss_pred             EeCCcccCCCCceEEeeeeHHHHHHHHHHHHhhhh-cCCCcceEEcCCCCcccH--------HHHHHHHHHHhCCCcceE
Confidence                          011345888888888875321 112456666655444442        555555556666544433

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=99.69  E-value=1.8e-16  Score=141.17  Aligned_cols=216  Identities=18%  Similarity=0.152  Sum_probs=147.2

Q ss_pred             EEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhhCCCCceE----EEeccCCCHHHHHHHHHHHHhcC
Q 019722           38 AIITGATSGIGAETARVLAKRGA-RLVLPARSLKAAEEAKARLASDCPGSDIV----VLPLDLSSLSSVRNFVSQFHSLN  112 (336)
Q Consensus        38 ~lItGgs~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~----~~~~Dl~~~~~v~~~~~~~~~~~  112 (336)
                      +|||||+|-||++++++|++.+. +|++++|++.++-...++++...++.++.    .+.+|++|.+.+..++++.    
T Consensus         1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~----   76 (293)
T PF02719_consen    1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEY----   76 (293)
T ss_dssp             EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT------
T ss_pred             CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhc----
Confidence            69999999999999999999995 89999999999999998887665554453    4578999999999988754    


Q ss_pred             CCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccccccc
Q 019722          113 LPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQ  192 (336)
Q Consensus       113 ~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~~  192 (336)
                       ++|++||.|+.-+-+  +-++...+.+.+|+.|+..+++++..+-.         .++|++|+--+..           
T Consensus        77 -~pdiVfHaAA~KhVp--l~E~~p~eav~tNv~GT~nv~~aa~~~~v---------~~~v~ISTDKAv~-----------  133 (293)
T PF02719_consen   77 -KPDIVFHAAALKHVP--LMEDNPFEAVKTNVLGTQNVAEAAIEHGV---------ERFVFISTDKAVN-----------  133 (293)
T ss_dssp             -T-SEEEE------HH--HHCCCHHHHHHHHCHHHHHHHHHHHHTT----------SEEEEEEECGCSS-----------
T ss_pred             -CCCEEEEChhcCCCC--hHHhCHHHHHHHHHHHHHHHHHHHHHcCC---------CEEEEccccccCC-----------
Confidence             799999999975443  12356678899999999999999988643         4999999965433           


Q ss_pred             ccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHHHHHH---------HHh
Q 019722          193 ISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFL---------TSK  263 (336)
Q Consensus       193 ~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~---------~~~  263 (336)
                               +...||+||...|.++.+++......+  .++.+|.=|.|-.....=.+- +.++.+.-         ..+
T Consensus       134 ---------PtnvmGatKrlaE~l~~~~~~~~~~~~--t~f~~VRFGNVlgS~GSVip~-F~~Qi~~g~PlTvT~p~mtR  201 (293)
T PF02719_consen  134 ---------PTNVMGATKRLAEKLVQAANQYSGNSD--TKFSSVRFGNVLGSRGSVIPL-FKKQIKNGGPLTVTDPDMTR  201 (293)
T ss_dssp             -----------SHHHHHHHHHHHHHHHHCCTSSSS----EEEEEEE-EETTGTTSCHHH-HHHHHHTTSSEEECETT-EE
T ss_pred             ---------CCcHHHHHHHHHHHHHHHHhhhCCCCC--cEEEEEEecceecCCCcHHHH-HHHHHHcCCcceeCCCCcEE
Confidence                     345799999999999999998765555  899999999986543332221 22222111         113


Q ss_pred             hcCChHHHHHHHHHHHhcCccccCCceeeccCc
Q 019722          264 LLKTIPQGAATTCYVAIHPRLVNVSGKYFADCN  296 (336)
Q Consensus       264 ~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~  296 (336)
                      ++.+++|.++.++..+...    ..|+.|..+-
T Consensus       202 ffmti~EAv~Lvl~a~~~~----~~geifvl~m  230 (293)
T PF02719_consen  202 FFMTIEEAVQLVLQAAALA----KGGEIFVLDM  230 (293)
T ss_dssp             EEE-HHHHHHHHHHHHHH------TTEEEEE--
T ss_pred             EEecHHHHHHHHHHHHhhC----CCCcEEEecC
Confidence            4457788888888887632    3576665554

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=99.68  E-value=3.1e-15  Score=133.31  Aligned_cols=209  Identities=15%  Similarity=0.113  Sum_probs=129.2

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHh
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHS  110 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  110 (336)
                      -...+++++||||+|+||++++++|+++|++|+++.|+.++......    .  +.++.++++|+++..  ..+.+.+. 
T Consensus        13 ~~~~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~----~--~~~~~~~~~Dl~d~~--~~l~~~~~-   83 (251)
T PLN00141         13 ENVKTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLP----Q--DPSLQIVRADVTEGS--DKLVEAIG-   83 (251)
T ss_pred             ccccCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhcc----c--CCceEEEEeeCCCCH--HHHHHHhh-
Confidence            34567899999999999999999999999999999999876543221    1  246889999999731  22222221 


Q ss_pred             cCCCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccccc
Q 019722          111 LNLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYL  190 (336)
Q Consensus       111 ~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~  190 (336)
                        .++|++|+|+|.....   .   ....+.+|+.+...+++++.    +.+     .++||++||... ++....    
T Consensus        84 --~~~d~vi~~~g~~~~~---~---~~~~~~~n~~~~~~ll~a~~----~~~-----~~~iV~iSS~~v-~g~~~~----  141 (251)
T PLN00141         84 --DDSDAVICATGFRRSF---D---PFAPWKVDNFGTVNLVEACR----KAG-----VTRFILVSSILV-NGAAMG----  141 (251)
T ss_pred             --cCCCEEEECCCCCcCC---C---CCCceeeehHHHHHHHHHHH----HcC-----CCEEEEEccccc-cCCCcc----
Confidence              2699999999864221   1   11234678888888888863    222     369999999753 211000    


Q ss_pred             ccccCCCCCCChhhHhHHHHHHHHHHHHHHHHH--HccCCCcEEEEEeeCCceeCCCCCccchhHHHHHHHHHHhhcCCh
Q 019722          191 GQISRNKSHYDATRAYALSKLANVLHTKELAQR--LKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSKLLKTI  268 (336)
Q Consensus       191 ~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e--~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~  268 (336)
                               .+....|...|.....+...+..|  +...+  ++++.|+||++.++...........   ........++
T Consensus       142 ---------~~~~~~~~~~~~~~~~~~~k~~~e~~l~~~g--i~~~iirpg~~~~~~~~~~~~~~~~---~~~~~~~i~~  207 (251)
T PLN00141        142 ---------QILNPAYIFLNLFGLTLVAKLQAEKYIRKSG--INYTIVRPGGLTNDPPTGNIVMEPE---DTLYEGSISR  207 (251)
T ss_pred             ---------cccCcchhHHHHHHHHHHHHHHHHHHHHhcC--CcEEEEECCCccCCCCCceEEECCC---CccccCcccH
Confidence                     111123444443333222222222  34445  9999999999987653321100000   0001123588


Q ss_pred             HHHHHHHHHHHhcCcc
Q 019722          269 PQGAATTCYVAIHPRL  284 (336)
Q Consensus       269 ~~~a~~~~~l~~~~~~  284 (336)
                      +++|..++.++..+..
T Consensus       208 ~dvA~~~~~~~~~~~~  223 (251)
T PLN00141        208 DQVAEVAVEALLCPES  223 (251)
T ss_pred             HHHHHHHHHHhcChhh
Confidence            9999999999986654

>TIGR01746 Thioester-redct thioester reductase domain

Probab=99.67  E-value=2.2e-14  Score=134.17  Aligned_cols=235  Identities=20%  Similarity=0.136  Sum_probs=142.7

Q ss_pred             EEEEeCCCChHHHHHHHHHHHCC--CEEEEeeCChHHH---HHHHHHHHhhCC-----C-CceEEEeccCCCHHH--HHH
Q 019722           37 TAIITGATSGIGAETARVLAKRG--ARLVLPARSLKAA---EEAKARLASDCP-----G-SDIVVLPLDLSSLSS--VRN  103 (336)
Q Consensus        37 ~~lItGgs~gIG~aia~~L~~~G--~~V~~~~r~~~~~---~~~~~~l~~~~~-----~-~~~~~~~~Dl~~~~~--v~~  103 (336)
                      +++||||||+||++++++|+++|  ++|+++.|+.+..   +++.+.+.....     . .++.++.+|++++..  -..
T Consensus         1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~   80 (367)
T TIGR01746         1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDA   80 (367)
T ss_pred             CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHH
Confidence            58999999999999999999999  6899999976532   222222221110     1 479999999987531  011


Q ss_pred             HHHHHHhcCCCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCcccccc
Q 019722          104 FVSQFHSLNLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFS  183 (336)
Q Consensus       104 ~~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~  183 (336)
                      ..+.+.   ..+|++||||+.....     ..++..+++|+.++..+++.+...    +     ..++|++||.......
T Consensus        81 ~~~~~~---~~~d~vih~a~~~~~~-----~~~~~~~~~nv~g~~~ll~~a~~~----~-----~~~~v~iSS~~v~~~~  143 (367)
T TIGR01746        81 EWERLA---ENVDTIVHNGALVNWV-----YPYSELRAANVLGTREVLRLAASG----R-----AKPLHYVSTISVLAAI  143 (367)
T ss_pred             HHHHHH---hhCCEEEeCCcEeccC-----CcHHHHhhhhhHHHHHHHHHHhhC----C-----CceEEEEccccccCCc
Confidence            112221   3699999999975421     345677889999999988876542    1     2469999997544321


Q ss_pred             CCc-ccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCcc---chhHHHHHHH
Q 019722          184 GDM-IRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRER---EGFITDLVFF  259 (336)
Q Consensus       184 ~~~-~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~---~~~~~~~~~~  259 (336)
                      ... ...++...  .........|+.+|.+.+.+++.++..    |  ++++.+.||.+.++.....   ..........
T Consensus       144 ~~~~~~~~~~~~--~~~~~~~~~Y~~sK~~~E~~~~~~~~~----g--~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~  215 (367)
T TIGR01746       144 DLSTVTEDDAIV--TPPPGLAGGYAQSKWVAELLVREASDR----G--LPVTIVRPGRILGNSYTGAINSSDILWRMVKG  215 (367)
T ss_pred             CCCCcccccccc--ccccccCCChHHHHHHHHHHHHHHHhc----C--CCEEEECCCceeecCCCCCCCchhHHHHHHHH
Confidence            100 00001000  001122346999999999988775532    5  9999999999987622211   1122222111


Q ss_pred             HHH-----------hhcCChHHHHHHHHHHHhcCccccCCceeeccCcc
Q 019722          260 LTS-----------KLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNE  297 (336)
Q Consensus       260 ~~~-----------~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~  297 (336)
                      ...           .....+++++.+++.++..+. ...+|..|...+.
T Consensus       216 ~~~~~~~p~~~~~~~~~~~vddva~ai~~~~~~~~-~~~~~~~~~v~~~  263 (367)
T TIGR01746       216 CLALGAYPDSPELTEDLTPVDYVARAIVALSSQPA-ASAGGPVFHVVNP  263 (367)
T ss_pred             HHHhCCCCCCCccccCcccHHHHHHHHHHHHhCCC-cccCCceEEecCC
Confidence            110           113456788999888876443 2234666666653

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=99.66  E-value=2.8e-14  Score=125.45  Aligned_cols=219  Identities=18%  Similarity=0.193  Sum_probs=153.1

Q ss_pred             EEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCCCccE
Q 019722           38 AIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLPLNL  117 (336)
Q Consensus        38 ~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~  117 (336)
                      +|||||+|.||.+++++|+++|..|+.+.|+.........+       .++.++.+|+.+.+.++++++..     .+|.
T Consensus         1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~-------~~~~~~~~dl~~~~~~~~~~~~~-----~~d~   68 (236)
T PF01370_consen    1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKK-------LNVEFVIGDLTDKEQLEKLLEKA-----NIDV   68 (236)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHH-------TTEEEEESETTSHHHHHHHHHHH-----TESE
T ss_pred             EEEEccCCHHHHHHHHHHHHcCCcccccccccccccccccc-------ceEEEEEeecccccccccccccc-----CceE
Confidence            69999999999999999999999988888776544322221       28999999999999999999876     7899


Q ss_pred             EEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcccccccccCCC
Q 019722          118 LINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNK  197 (336)
Q Consensus       118 lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~~~~~~~  197 (336)
                      +||+|+....  ....+.....++.|+.+...+++++...-         ..++|++||. ..++......+     ++.
T Consensus        69 vi~~a~~~~~--~~~~~~~~~~~~~n~~~~~~ll~~~~~~~---------~~~~i~~sS~-~~y~~~~~~~~-----~e~  131 (236)
T PF01370_consen   69 VIHLAAFSSN--PESFEDPEEIIEANVQGTRNLLEAAREAG---------VKRFIFLSSA-SVYGDPDGEPI-----DED  131 (236)
T ss_dssp             EEEEBSSSSH--HHHHHSHHHHHHHHHHHHHHHHHHHHHHT---------TSEEEEEEEG-GGGTSSSSSSB-----ETT
T ss_pred             EEEeeccccc--ccccccccccccccccccccccccccccc---------cccccccccc-ccccccccccc-----ccc
Confidence            9999997531  11225667788888888888777776542         2489999994 44442211111     122


Q ss_pred             CCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCC--CCccchhHHHHHHHHHHhh-----------
Q 019722          198 SHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRL--TREREGFITDLVFFLTSKL-----------  264 (336)
Q Consensus       198 ~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~--~~~~~~~~~~~~~~~~~~~-----------  264 (336)
                      ........|+.+|...+.+.+.+.++.   +  +++..+.|+.+..+.  ...................           
T Consensus       132 ~~~~~~~~Y~~~K~~~e~~~~~~~~~~---~--~~~~~~R~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  206 (236)
T PF01370_consen  132 SPINPLSPYGASKRAAEELLRDYAKKY---G--LRVTILRPPNVYGPGNPNNNSSSFLPSLIRQALKGKPIKIPGDGSQV  206 (236)
T ss_dssp             SGCCHSSHHHHHHHHHHHHHHHHHHHH---T--SEEEEEEESEEESTTSSSSSTSSHHHHHHHHHHTTSSEEEESTSSCE
T ss_pred             ccccccccccccccccccccccccccc---c--cccccccccccccccccccccccccchhhHHhhcCCcccccCCCCCc
Confidence            223455569999999999999988775   3  999999999999888  1111223333333333211           


Q ss_pred             --cCChHHHHHHHHHHHhcCccccCCceeec
Q 019722          265 --LKTIPQGAATTCYVAIHPRLVNVSGKYFA  293 (336)
Q Consensus       265 --~~~~~~~a~~~~~l~~~~~~~~~~G~~~~  293 (336)
                        ....+|.+.+++.++.++.   ..|..|+
T Consensus       207 ~~~i~v~D~a~~~~~~~~~~~---~~~~~yN  234 (236)
T PF01370_consen  207 RDFIHVDDLAEAIVAALENPK---AAGGIYN  234 (236)
T ss_dssp             EEEEEHHHHHHHHHHHHHHSC---TTTEEEE
T ss_pred             cceEEHHHHHHHHHHHHhCCC---CCCCEEE
Confidence              1234788888888888665   3455554

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>PLN02427 UDP-apiose/xylose synthase

Probab=99.65  E-value=6.4e-14  Score=132.72  Aligned_cols=237  Identities=12%  Similarity=0.039  Sum_probs=147.3

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHC-CCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhc
Q 019722           33 LSSVTAIITGATSGIGAETARVLAKR-GARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSL  111 (336)
Q Consensus        33 l~gk~~lItGgs~gIG~aia~~L~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  111 (336)
                      ++.+++|||||+|.||++++++|+++ |++|++++|+.+............ ...++.++.+|++|...+.++++     
T Consensus        12 ~~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~~~~-~~~~~~~~~~Dl~d~~~l~~~~~-----   85 (386)
T PLN02427         12 IKPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVP-WSGRIQFHRINIKHDSRLEGLIK-----   85 (386)
T ss_pred             ccCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhcccccc-CCCCeEEEEcCCCChHHHHHHhh-----
Confidence            45568999999999999999999998 589999998865543322110000 12368999999999988877765     


Q ss_pred             CCCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcc--cc
Q 019722          112 NLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMI--RY  189 (336)
Q Consensus       112 ~~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~--~~  189 (336)
                        .+|+|||+|+......  ...+-.+.+..|+.+...+++++...          +.++|++||.. .++.....  +.
T Consensus        86 --~~d~ViHlAa~~~~~~--~~~~~~~~~~~n~~gt~~ll~aa~~~----------~~r~v~~SS~~-vYg~~~~~~~~e  150 (386)
T PLN02427         86 --MADLTINLAAICTPAD--YNTRPLDTIYSNFIDALPVVKYCSEN----------NKRLIHFSTCE-VYGKTIGSFLPK  150 (386)
T ss_pred             --cCCEEEEcccccChhh--hhhChHHHHHHHHHHHHHHHHHHHhc----------CCEEEEEeeee-eeCCCcCCCCCc
Confidence              4799999999654321  11122345678999998888776432          24899999964 33321100  00


Q ss_pred             cccccC--------CC-CC------CChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCcc-----
Q 019722          190 LGQISR--------NK-SH------YDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRER-----  249 (336)
Q Consensus       190 ~~~~~~--------~~-~~------~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~-----  249 (336)
                      +.....        ++ ..      ......|+.+|.+.+.+++.++..   .+  +.+..+.|+.|.++.....     
T Consensus       151 ~~p~~~~~~~~~~~e~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~g--~~~~ilR~~~vyGp~~~~~~~~~~  225 (386)
T PLN02427        151 DHPLRQDPAFYVLKEDESPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NG--LEFTIVRPFNWIGPRMDFIPGIDG  225 (386)
T ss_pred             ccccccccccccccccccccccCCCCccccchHHHHHHHHHHHHHHHhh---cC--CceEEecccceeCCCCCccccccc
Confidence            100000        00 00      012246999999999999876544   24  9999999999998753210     


Q ss_pred             -----chhHHHHHHHHHH-------------hhcCChHHHHHHHHHHHhcCccccCCceeeccCcc
Q 019722          250 -----EGFITDLVFFLTS-------------KLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNE  297 (336)
Q Consensus       250 -----~~~~~~~~~~~~~-------------~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~  297 (336)
                           .............             .-....+|.+.+++.++..+.  ...|..|+..+.
T Consensus       226 ~~~~~~~~i~~~~~~~~~~~~~~~~g~g~~~r~~i~V~Dva~ai~~al~~~~--~~~g~~yni~~~  289 (386)
T PLN02427        226 PSEGVPRVLACFSNNLLRREPLKLVDGGQSQRTFVYIKDAIEAVLLMIENPA--RANGHIFNVGNP  289 (386)
T ss_pred             cccccchHHHHHHHHHhcCCCeEEECCCCceECcEeHHHHHHHHHHHHhCcc--cccCceEEeCCC
Confidence                 1111111111110             012346888999988876432  124667766654

>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.65  E-value=3.4e-14  Score=124.38  Aligned_cols=230  Identities=14%  Similarity=0.131  Sum_probs=160.0

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHCCC--EEEEeeCChHHH-HHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcC
Q 019722           36 VTAIITGATSGIGAETARVLAKRGA--RLVLPARSLKAA-EEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLN  112 (336)
Q Consensus        36 k~~lItGgs~gIG~aia~~L~~~G~--~V~~~~r~~~~~-~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  112 (336)
                      +++|||||+|.||..+++.++++.-  +|+.++.=.-.. .+.++.+..   +.+..++++|+.|.+.+.+++++.    
T Consensus         1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~~~~~---~~~~~fv~~DI~D~~~v~~~~~~~----   73 (340)
T COG1088           1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADVED---SPRYRFVQGDICDRELVDRLFKEY----   73 (340)
T ss_pred             CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHHhhhc---CCCceEEeccccCHHHHHHHHHhc----
Confidence            4689999999999999999999875  467665322111 112222222   469999999999999999998854    


Q ss_pred             CCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccccccc
Q 019722          113 LPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQ  192 (336)
Q Consensus       113 ~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~~  192 (336)
                       .+|+++|-|+=.+  -+-+.++.+..+++|+.|++.|++++..+..+        -|.+.||.- -.++   .+..++.
T Consensus        74 -~~D~VvhfAAESH--VDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~--------frf~HISTD-EVYG---~l~~~~~  138 (340)
T COG1088          74 -QPDAVVHFAAESH--VDRSIDGPAPFIQTNVVGTYTLLEAARKYWGK--------FRFHHISTD-EVYG---DLGLDDD  138 (340)
T ss_pred             -CCCeEEEechhcc--ccccccChhhhhhcchHHHHHHHHHHHHhccc--------ceEEEeccc-cccc---cccCCCC
Confidence             6899999998443  23456677789999999999999999988743        388999883 1222   2233333


Q ss_pred             ccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHHHHHHH-HhhcCC----
Q 019722          193 ISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLT-SKLLKT----  267 (336)
Q Consensus       193 ~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~-~~~~~~----  267 (336)
                      ..++..++.+..+|++|||+...|++++.+.++     +.++...+..-..|.+..     +++.+.+. ....+.    
T Consensus       139 ~FtE~tp~~PsSPYSASKAasD~lVray~~TYg-----lp~~ItrcSNNYGPyqfp-----EKlIP~~I~nal~g~~lpv  208 (340)
T COG1088         139 AFTETTPYNPSSPYSASKAASDLLVRAYVRTYG-----LPATITRCSNNYGPYQFP-----EKLIPLMIINALLGKPLPV  208 (340)
T ss_pred             CcccCCCCCCCCCcchhhhhHHHHHHHHHHHcC-----CceEEecCCCCcCCCcCc-----hhhhHHHHHHHHcCCCCce
Confidence            334555677788899999999999999999876     777777777777775443     23333222 111211    


Q ss_pred             ------------hHHHHHHHHHHHhcCccccCCceeeccCcccccc
Q 019722          268 ------------IPQGAATTCYVAIHPRLVNVSGKYFADCNEAWTS  301 (336)
Q Consensus       268 ------------~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~~  301 (336)
                                  ++|=+.++-.++..    +.-|+.++..|.....
T Consensus       209 YGdG~~iRDWl~VeDh~~ai~~Vl~k----g~~GE~YNIgg~~E~~  250 (340)
T COG1088         209 YGDGLQIRDWLYVEDHCRAIDLVLTK----GKIGETYNIGGGNERT  250 (340)
T ss_pred             ecCCcceeeeEEeHhHHHHHHHHHhc----CcCCceEEeCCCccch
Confidence                        24547776666652    3359999999886554

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=99.65  E-value=1e-14  Score=138.09  Aligned_cols=237  Identities=15%  Similarity=0.093  Sum_probs=154.6

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHH--HHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHh
Q 019722           33 LSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEE--AKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHS  110 (336)
Q Consensus        33 l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~--~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  110 (336)
                      .++++++||||+|+||++++++|+++|++|+++.|+......  ..+++...  ..++.++++|++|++++.++++.+. 
T Consensus        58 ~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~--~~~v~~v~~Dl~d~~~l~~~~~~~~-  134 (390)
T PLN02657         58 PKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKE--LPGAEVVFGDVTDADSLRKVLFSEG-  134 (390)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhh--cCCceEEEeeCCCHHHHHHHHHHhC-
Confidence            567899999999999999999999999999999998765421  11112111  2468899999999999999887531 


Q ss_pred             cCCCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccccc
Q 019722          111 LNLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYL  190 (336)
Q Consensus       111 ~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~  190 (336)
                        .++|+||||++.....       ....+++|+.+...+++++.    +.+     -+++|++||....          
T Consensus       135 --~~~D~Vi~~aa~~~~~-------~~~~~~vn~~~~~~ll~aa~----~~g-----v~r~V~iSS~~v~----------  186 (390)
T PLN02657        135 --DPVDVVVSCLASRTGG-------VKDSWKIDYQATKNSLDAGR----EVG-----AKHFVLLSAICVQ----------  186 (390)
T ss_pred             --CCCcEEEECCccCCCC-------CccchhhHHHHHHHHHHHHH----HcC-----CCEEEEEeecccc----------
Confidence              2699999999853211       12345678888777777654    222     3589999997532          


Q ss_pred             ccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHHHH-----HHHHh--
Q 019722          191 GQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVF-----FLTSK--  263 (336)
Q Consensus       191 ~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~-----~~~~~--  263 (336)
                                .....|..+|...+...+.     ...+  +++..|.|+.+..++...    ......     .+...  
T Consensus       187 ----------~p~~~~~~sK~~~E~~l~~-----~~~g--l~~tIlRp~~~~~~~~~~----~~~~~~g~~~~~~GdG~~  245 (390)
T PLN02657        187 ----------KPLLEFQRAKLKFEAELQA-----LDSD--FTYSIVRPTAFFKSLGGQ----VEIVKDGGPYVMFGDGKL  245 (390)
T ss_pred             ----------CcchHHHHHHHHHHHHHHh-----ccCC--CCEEEEccHHHhcccHHH----HHhhccCCceEEecCCcc
Confidence                      1233578889888876543     1234  999999998876443211    110000     00000  


Q ss_pred             ---hcCChHHHHHHHHHHHhcCccccCCceeeccCcc-cccccCCCCHHHHHHHHHHHHHhhccCCCCCCCCC
Q 019722          264 ---LLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNE-AWTSKLGSNSNEASRLWAASELLVSRDPKSVFDPL  332 (336)
Q Consensus       264 ---~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~-~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~p~  332 (336)
                         .....+|.|..++.++..+..   .|+.|...+. ...+.        +++-+.+.++++.+++....|.
T Consensus       246 ~~~~~I~v~DlA~~i~~~~~~~~~---~~~~~~Iggp~~~~S~--------~Eia~~l~~~lG~~~~~~~vp~  307 (390)
T PLN02657        246 CACKPISEADLASFIADCVLDESK---INKVLPIGGPGKALTP--------LEQGEMLFRILGKEPKFFKVPI  307 (390)
T ss_pred             cccCceeHHHHHHHHHHHHhCccc---cCCEEEcCCCCcccCH--------HHHHHHHHHHhCCCCceEEcCH
Confidence               123567888888888764432   4677777664 34442        6666666677777666555543

>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

Probab=99.64  E-value=8.5e-15  Score=128.65  Aligned_cols=161  Identities=17%  Similarity=0.171  Sum_probs=124.2

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCCCc
Q 019722           36 VTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLPL  115 (336)
Q Consensus        36 k~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i  115 (336)
                      .++|||||+|.||++++.+|++.|++|+++++-...-.+.....       .+.+++.|+.|...+++++++.     +|
T Consensus         1 ~~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~~-------~~~f~~gDi~D~~~L~~vf~~~-----~i   68 (329)
T COG1087           1 MKVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLKL-------QFKFYEGDLLDRALLTAVFEEN-----KI   68 (329)
T ss_pred             CeEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhhc-------cCceEEeccccHHHHHHHHHhc-----CC
Confidence            36899999999999999999999999999997655444443321       2789999999999999999864     79


Q ss_pred             cEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcccccccccC
Q 019722          116 NLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISR  195 (336)
Q Consensus       116 d~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~~~~~  195 (336)
                      |.|||-||...-.+  +.+...++++.|+.|+..|+++....-.          +=+++||+++.++.+...+..+    
T Consensus        69 daViHFAa~~~VgE--Sv~~Pl~Yy~NNv~gTl~Ll~am~~~gv----------~~~vFSStAavYG~p~~~PI~E----  132 (329)
T COG1087          69 DAVVHFAASISVGE--SVQNPLKYYDNNVVGTLNLIEAMLQTGV----------KKFIFSSTAAVYGEPTTSPISE----  132 (329)
T ss_pred             CEEEECccccccch--hhhCHHHHHhhchHhHHHHHHHHHHhCC----------CEEEEecchhhcCCCCCcccCC----
Confidence            99999999654332  4455678999999999999988766542          3355677778887665544333    


Q ss_pred             CCCCCChhhHhHHHHHHHHHHHHHHHHHHc
Q 019722          196 NKSHYDATRAYALSKLANVLHTKELAQRLK  225 (336)
Q Consensus       196 ~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~  225 (336)
                       ..+..+..+|+.||.+.|.+.+.+++...
T Consensus       133 -~~~~~p~NPYG~sKlm~E~iL~d~~~a~~  161 (329)
T COG1087         133 -TSPLAPINPYGRSKLMSEEILRDAAKANP  161 (329)
T ss_pred             -CCCCCCCCcchhHHHHHHHHHHHHHHhCC
Confidence             32344566799999999999999998765

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=99.63  E-value=1.8e-13  Score=127.72  Aligned_cols=229  Identities=10%  Similarity=0.015  Sum_probs=145.3

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHC-CCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCC-CHHHHHHHHHHHHhcCC
Q 019722           36 VTAIITGATSGIGAETARVLAKR-GARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLS-SLSSVRNFVSQFHSLNL  113 (336)
Q Consensus        36 k~~lItGgs~gIG~aia~~L~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~-~~~~v~~~~~~~~~~~~  113 (336)
                      +++|||||+|.||++++++|+++ |++|+.++|+......    +.   +...+.++.+|++ +...+..+++       
T Consensus         2 ~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~~----~~---~~~~~~~~~~Dl~~~~~~~~~~~~-------   67 (347)
T PRK11908          2 KKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLGD----LV---NHPRMHFFEGDITINKEWIEYHVK-------   67 (347)
T ss_pred             cEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHHH----hc---cCCCeEEEeCCCCCCHHHHHHHHc-------
Confidence            47999999999999999999986 6899999987653322    11   1246889999998 5665555443       


Q ss_pred             CccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcccccccc
Q 019722          114 PLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQI  193 (336)
Q Consensus       114 ~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~~~  193 (336)
                      ++|+|||+|+......  ..++.+..+++|+.+...+++++...          +.++|++||.. .++......+.+..
T Consensus        68 ~~d~ViH~aa~~~~~~--~~~~p~~~~~~n~~~~~~ll~aa~~~----------~~~~v~~SS~~-vyg~~~~~~~~ee~  134 (347)
T PRK11908         68 KCDVILPLVAIATPAT--YVKQPLRVFELDFEANLPIVRSAVKY----------GKHLVFPSTSE-VYGMCPDEEFDPEA  134 (347)
T ss_pred             CCCEEEECcccCChHH--hhcCcHHHHHHHHHHHHHHHHHHHhc----------CCeEEEEecce-eeccCCCcCcCccc
Confidence            5899999999644321  12344577899999999888776532          24899999974 34322111111110


Q ss_pred             --cCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCc-------cchhHHHHHHHHHH--
Q 019722          194 --SRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRE-------REGFITDLVFFLTS--  262 (336)
Q Consensus       194 --~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~-------~~~~~~~~~~~~~~--  262 (336)
                        ........+...|+.+|.+.+.+++.++.+.   +  +.+..+.|+.+..+....       ...........+..  
T Consensus       135 ~~~~~~~~~~p~~~Y~~sK~~~e~~~~~~~~~~---~--~~~~ilR~~~v~Gp~~~~~~~~~~~~~~~i~~~~~~~~~~~  209 (347)
T PRK11908        135 SPLVYGPINKPRWIYACSKQLMDRVIWAYGMEE---G--LNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGE  209 (347)
T ss_pred             cccccCcCCCccchHHHHHHHHHHHHHHHHHHc---C--CCeEEEeeeeeeCCCccCCCccccCCcchHHHHHHHHhCCC
Confidence              0000001233479999999999999887653   3  788889999988775321       11122222222110  


Q ss_pred             -----------hhcCChHHHHHHHHHHHhcCccccCCceeeccCcc
Q 019722          263 -----------KLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNE  297 (336)
Q Consensus       263 -----------~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~  297 (336)
                                 ......+|.+.+++.++..+.. ...|+.|+..+.
T Consensus       210 ~~~~~~~g~~~r~~i~v~D~a~a~~~~~~~~~~-~~~g~~yni~~~  254 (347)
T PRK11908        210 PISLVDGGSQKRAFTDIDDGIDALMKIIENKDG-VASGKIYNIGNP  254 (347)
T ss_pred             ceEEecCCceeeccccHHHHHHHHHHHHhCccc-cCCCCeEEeCCC
Confidence                       1134568889999988875421 124666766553

>PLN02206 UDP-glucuronate decarboxylase

Probab=99.63  E-value=2.2e-13  Score=130.81  Aligned_cols=255  Identities=13%  Similarity=0.066  Sum_probs=152.8

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHh
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHS  110 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  110 (336)
                      ..-+++++|||||+|.||++++++|+++|++|++++|......+...   ......++.++..|+.+..     +     
T Consensus       115 ~~~~~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~~~~~~---~~~~~~~~~~i~~D~~~~~-----l-----  181 (442)
T PLN02206        115 LKRKGLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKENVM---HHFSNPNFELIRHDVVEPI-----L-----  181 (442)
T ss_pred             cccCCCEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCCccchhhhh---hhccCCceEEEECCccChh-----h-----
Confidence            34477899999999999999999999999999998875332211111   1111346788889986652     1     


Q ss_pred             cCCCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccccc
Q 019722          111 LNLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYL  190 (336)
Q Consensus       111 ~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~  190 (336)
                        ..+|+|||+|+......  ...+..+.+++|+.++..+++++...          +.++|++||.. .++.......+
T Consensus       182 --~~~D~ViHlAa~~~~~~--~~~~p~~~~~~Nv~gt~nLleaa~~~----------g~r~V~~SS~~-VYg~~~~~p~~  246 (442)
T PLN02206        182 --LEVDQIYHLACPASPVH--YKFNPVKTIKTNVVGTLNMLGLAKRV----------GARFLLTSTSE-VYGDPLQHPQV  246 (442)
T ss_pred             --cCCCEEEEeeeecchhh--hhcCHHHHHHHHHHHHHHHHHHHHHh----------CCEEEEECChH-HhCCCCCCCCC
Confidence              15899999998654321  12234678999999999999887542          24899999964 33221111111


Q ss_pred             ccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCcc-chhHHHHHHHHHH-------
Q 019722          191 GQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRER-EGFITDLVFFLTS-------  262 (336)
Q Consensus       191 ~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~-~~~~~~~~~~~~~-------  262 (336)
                      +.......+......|+.+|.+.+.+++.+.+..   +  +++..+.|+.+..+..... .......+.....       
T Consensus       247 E~~~~~~~P~~~~s~Y~~SK~~aE~~~~~y~~~~---g--~~~~ilR~~~vyGp~~~~~~~~~v~~~i~~~l~~~~i~i~  321 (442)
T PLN02206        247 ETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGA---N--VEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVY  321 (442)
T ss_pred             ccccccCCCCCccchHHHHHHHHHHHHHHHHHHh---C--CCeEEEEeccccCCCCCccccchHHHHHHHHHcCCCcEEe
Confidence            1110011122335679999999999888876553   3  8889999988887753211 1112222222111       


Q ss_pred             ------hhcCChHHHHHHHHHHHhcCccccCCceeeccCcccccccCCCCHHHHHHHHHHHHHhhccCCCCCCCC
Q 019722          263 ------KLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWTSKLGSNSNEASRLWAASELLVSRDPKSVFDP  331 (336)
Q Consensus       263 ------~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~p  331 (336)
                            ......+|.+.+++.++..+    ..| .|+..++...+-        .++-+.+.+.++......+.|
T Consensus       322 g~G~~~rdfi~V~Dva~ai~~a~e~~----~~g-~yNIgs~~~~sl--------~Elae~i~~~~g~~~~i~~~p  383 (442)
T PLN02206        322 GDGKQTRSFQFVSDLVEGLMRLMEGE----HVG-PFNLGNPGEFTM--------LELAKVVQETIDPNAKIEFRP  383 (442)
T ss_pred             CCCCEEEeEEeHHHHHHHHHHHHhcC----CCc-eEEEcCCCceeH--------HHHHHHHHHHhCCCCceeeCC
Confidence                  01234688888888877532    234 455555443332        334444444454433333444

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=99.61  E-value=2e-13  Score=137.72  Aligned_cols=235  Identities=12%  Similarity=0.058  Sum_probs=151.5

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHC-CCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHH-HHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKR-GARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSS-VRNFVSQ  107 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~-v~~~~~~  107 (336)
                      |.-..++++|||||+|.||.+++++|+++ |++|+.++|+.......    .   ...++.++.+|+++... ++++++ 
T Consensus       310 ~~~~~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~~----~---~~~~~~~~~gDl~d~~~~l~~~l~-  381 (660)
T PRK08125        310 CSAKRRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISRF----L---GHPRFHFVEGDISIHSEWIEYHIK-  381 (660)
T ss_pred             hhhhcCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhhh----c---CCCceEEEeccccCcHHHHHHHhc-
Confidence            66678899999999999999999999986 79999999986533221    1   12468899999998655 344332 


Q ss_pred             HHhcCCCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcc
Q 019722          108 FHSLNLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMI  187 (336)
Q Consensus       108 ~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~  187 (336)
                            ++|+|||+|+......  .....+..+++|+.+...+++++...          +.++|++||.. .++.....
T Consensus       382 ------~~D~ViHlAa~~~~~~--~~~~~~~~~~~Nv~~t~~ll~a~~~~----------~~~~V~~SS~~-vyg~~~~~  442 (660)
T PRK08125        382 ------KCDVVLPLVAIATPIE--YTRNPLRVFELDFEENLKIIRYCVKY----------NKRIIFPSTSE-VYGMCTDK  442 (660)
T ss_pred             ------CCCEEEECccccCchh--hccCHHHHHHhhHHHHHHHHHHHHhc----------CCeEEEEcchh-hcCCCCCC
Confidence                  5899999999754321  12334567899999999998887642          14899999963 33321111


Q ss_pred             cccccccC-CCCC-CChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCcc-------chhHHHHHH
Q 019722          188 RYLGQISR-NKSH-YDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRER-------EGFITDLVF  258 (336)
Q Consensus       188 ~~~~~~~~-~~~~-~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~-------~~~~~~~~~  258 (336)
                      .+++.... ...+ ......|+.||.+.+.+++.++++.   +  +++..+.|+.+..+.....       .........
T Consensus       443 ~~~E~~~~~~~~p~~~p~s~Yg~sK~~~E~~~~~~~~~~---g--~~~~ilR~~~vyGp~~~~~~~~~~~~~~~i~~~i~  517 (660)
T PRK08125        443 YFDEDTSNLIVGPINKQRWIYSVSKQLLDRVIWAYGEKE---G--LRFTLFRPFNWMGPRLDNLNAARIGSSRAITQLIL  517 (660)
T ss_pred             CcCccccccccCCCCCCccchHHHHHHHHHHHHHHHHhc---C--CceEEEEEceeeCCCccccccccccccchHHHHHH
Confidence            11111000 0000 1223469999999999999887664   3  8999999999998753221       111222222


Q ss_pred             HHHH-------------hhcCChHHHHHHHHHHHhcCccccCCceeeccCcc
Q 019722          259 FLTS-------------KLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNE  297 (336)
Q Consensus       259 ~~~~-------------~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~  297 (336)
                      ....             ......+|.+.+++.++..+. ....|+.|+..++
T Consensus       518 ~~~~~~~i~~~g~g~~~rd~i~v~Dva~a~~~~l~~~~-~~~~g~iyni~~~  568 (660)
T PRK08125        518 NLVEGSPIKLVDGGKQKRCFTDIRDGIEALFRIIENKD-NRCDGQIINIGNP  568 (660)
T ss_pred             HhcCCCCeEEeCCCceeeceeeHHHHHHHHHHHHhccc-cccCCeEEEcCCC
Confidence            2111             112346888888888876432 1235777766654

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=99.61  E-value=2.1e-13  Score=125.21  Aligned_cols=248  Identities=13%  Similarity=0.071  Sum_probs=150.8

Q ss_pred             EEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCCCcc
Q 019722           38 AIITGATSGIGAETARVLAKRGA-RLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLPLN  116 (336)
Q Consensus        38 ~lItGgs~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id  116 (336)
                      +|||||+|.||.++++.|+++|+ .|++++|..... . ..++       ....+..|+++.+.++.+.+.   .+.++|
T Consensus         1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~-~-~~~~-------~~~~~~~d~~~~~~~~~~~~~---~~~~~D   68 (314)
T TIGR02197         1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGH-K-FLNL-------ADLVIADYIDKEDFLDRLEKG---AFGKIE   68 (314)
T ss_pred             CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCch-h-hhhh-------hheeeeccCcchhHHHHHHhh---ccCCCC
Confidence            58999999999999999999998 788887654321 1 1111       113466788887776665543   345799


Q ss_pred             EEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcccccccccCC
Q 019722          117 LLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRN  196 (336)
Q Consensus       117 ~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~~~~~~  196 (336)
                      ++||+|+....    ...+.+..+++|+.+...+++++...          +.++|++||.. .++... ..+    .++
T Consensus        69 ~vvh~A~~~~~----~~~~~~~~~~~n~~~~~~ll~~~~~~----------~~~~v~~SS~~-vy~~~~-~~~----~e~  128 (314)
T TIGR02197        69 AIFHQGACSDT----TETDGEYMMENNYQYSKRLLDWCAEK----------GIPFIYASSAA-TYGDGE-AGF----REG  128 (314)
T ss_pred             EEEECccccCc----cccchHHHHHHHHHHHHHHHHHHHHh----------CCcEEEEccHH-hcCCCC-CCc----ccc
Confidence            99999996432    23456778999999999999886642          24899999964 443221 111    111


Q ss_pred             CCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCcc---chhHHHHHHHHHH-----------
Q 019722          197 KSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRER---EGFITDLVFFLTS-----------  262 (336)
Q Consensus       197 ~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~---~~~~~~~~~~~~~-----------  262 (336)
                      .....+...|+.+|...+.+++....+... +  +++..+.|+.+..+.....   .............           
T Consensus       129 ~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~-~--~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  205 (314)
T TIGR02197       129 RELERPLNVYGYSKFLFDQYVRRRVLPEAL-S--AQVVGLRYFNVYGPREYHKGKMASVAFHLFNQIKAGGNVKLFKSSE  205 (314)
T ss_pred             cCcCCCCCHHHHHHHHHHHHHHHHhHhhcc-C--CceEEEEEeeccCCCCCCCCCcccHHHHHHHHHhcCCCeEEecCcc
Confidence            111224557999999999998864332221 2  7888999999887753211   1112222221110           


Q ss_pred             --------hhcCChHHHHHHHHHHHhcCccccCCceeeccCcccccccCCCCHHHHHHHHHHHHHhhccCCCCCCCCCC
Q 019722          263 --------KLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWTSKLGSNSNEASRLWAASELLVSRDPKSVFDPLS  333 (336)
Q Consensus       263 --------~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~p~~  333 (336)
                              ......+|.+.+++.++..    . .+..|+..+....+.        +++-+.+.++++..+...+.|.+
T Consensus       206 ~~~~g~~~~~~i~v~D~a~~i~~~~~~----~-~~~~yni~~~~~~s~--------~e~~~~i~~~~g~~~~~~~~~~~  271 (314)
T TIGR02197       206 GFKDGEQLRDFVYVKDVVDVNLWLLEN----G-VSGIFNLGTGRARSF--------NDLADAVFKALGKDEKIEYIPMP  271 (314)
T ss_pred             ccCCCCceeeeEEHHHHHHHHHHHHhc----c-cCceEEcCCCCCccH--------HHHHHHHHHHhCCCCcceeccCc
Confidence                    1123467888888888864    1 344555555444432        34444444555654444444443

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.60  E-value=2.6e-13  Score=124.47  Aligned_cols=241  Identities=16%  Similarity=0.095  Sum_probs=157.6

Q ss_pred             EEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCCCc-c
Q 019722           38 AIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLPL-N  116 (336)
Q Consensus        38 ~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i-d  116 (336)
                      +|||||+|.||.+++++|+++|++|+.++|.........         ..+.++.+|+++.+.+..+++       .. |
T Consensus         3 ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---------~~~~~~~~d~~~~~~~~~~~~-------~~~d   66 (314)
T COG0451           3 ILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLL---------SGVEFVVLDLTDRDLVDELAK-------GVPD   66 (314)
T ss_pred             EEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCccccccc---------cccceeeecccchHHHHHHHh-------cCCC
Confidence            899999999999999999999999999999876543221         367889999998855555554       23 9


Q ss_pred             EEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcccccccccCC
Q 019722          117 LLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRN  196 (336)
Q Consensus       117 ~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~~~~~~  196 (336)
                      ++||+|+.......... .....+.+|+.++..+++++..    .+     ..++|+.||.+..........+++..   
T Consensus        67 ~vih~aa~~~~~~~~~~-~~~~~~~~nv~gt~~ll~aa~~----~~-----~~~~v~~ss~~~~~~~~~~~~~~E~~---  133 (314)
T COG0451          67 AVIHLAAQSSVPDSNAS-DPAEFLDVNVDGTLNLLEAARA----AG-----VKRFVFASSVSVVYGDPPPLPIDEDL---  133 (314)
T ss_pred             EEEEccccCchhhhhhh-CHHHHHHHHHHHHHHHHHHHHH----cC-----CCeEEEeCCCceECCCCCCCCccccc---
Confidence            99999997665422222 4567899999999999999888    11     35888855544343321111111111   


Q ss_pred             CCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCcc-c-hhHHHHHHHHHHh-----------
Q 019722          197 KSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRER-E-GFITDLVFFLTSK-----------  263 (336)
Q Consensus       197 ~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~-~-~~~~~~~~~~~~~-----------  263 (336)
                      ....+.. .|+.+|.+.+.+++..+.   ..+  +.+..+.|+.+..+..... . .............           
T Consensus       134 ~~~~p~~-~Yg~sK~~~E~~~~~~~~---~~~--~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  207 (314)
T COG0451         134 GPPRPLN-PYGVSKLAAEQLLRAYAR---LYG--LPVVILRPFNVYGPGDKPDLSSGVVSAFIRQLLKGEPIIVIGGDGS  207 (314)
T ss_pred             CCCCCCC-HHHHHHHHHHHHHHHHHH---HhC--CCeEEEeeeeeeCCCCCCCCCcCcHHHHHHHHHhCCCcceEeCCCc
Confidence            1112222 799999999999999988   334  9999999999987765543 1 1121111111111           


Q ss_pred             ---hcCChHHHHHHHHHHHhcCccccCCceeeccCccc-ccccCCCCHHHHHHHHHHHHHhhccCCC
Q 019722          264 ---LLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEA-WTSKLGSNSNEASRLWAASELLVSRDPK  326 (336)
Q Consensus       264 ---~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~-~~~~~~~~~~~~~~~w~~~~~~~~~~~~  326 (336)
                         .....+|.+.+++.++..+..    + .++..+.. ..+.        .++.+.+.+.++..+.
T Consensus       208 ~~~~~i~v~D~a~~~~~~~~~~~~----~-~~ni~~~~~~~~~--------~e~~~~~~~~~~~~~~  261 (314)
T COG0451         208 QTRDFVYVDDVADALLLALENPDG----G-VFNIGSGTAEITV--------RELAEAVAEAVGSKAP  261 (314)
T ss_pred             eeEeeEeHHHHHHHHHHHHhCCCC----c-EEEeCCCCCcEEH--------HHHHHHHHHHhCCCCc
Confidence               023367888898888875443    2 55555543 3332        5556666666666544

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=99.60  E-value=3.3e-13  Score=129.36  Aligned_cols=253  Identities=13%  Similarity=0.053  Sum_probs=154.6

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCC
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNL  113 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  113 (336)
                      ..+++|||||+|.||++++++|+++|++|++++|...........+.   ...++.++..|+.+..     +       .
T Consensus       119 ~~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~~~~~~~~~---~~~~~~~~~~Di~~~~-----~-------~  183 (436)
T PLN02166        119 KRLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENLVHLF---GNPRFELIRHDVVEPI-----L-------L  183 (436)
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCccHhHhhhhc---cCCceEEEECcccccc-----c-------c
Confidence            34579999999999999999999999999999986432111111111   1346788888986542     1       2


Q ss_pred             CccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcccccccc
Q 019722          114 PLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQI  193 (336)
Q Consensus       114 ~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~~~  193 (336)
                      ++|+|||+|+......  ...+..+.+++|+.++..+++++...          +.++|++||.. .++.......++..
T Consensus       184 ~~D~ViHlAa~~~~~~--~~~~p~~~~~~Nv~gT~nLleaa~~~----------g~r~V~~SS~~-VYg~~~~~p~~E~~  250 (436)
T PLN02166        184 EVDQIYHLACPASPVH--YKYNPVKTIKTNVMGTLNMLGLAKRV----------GARFLLTSTSE-VYGDPLEHPQKETY  250 (436)
T ss_pred             CCCEEEECceeccchh--hccCHHHHHHHHHHHHHHHHHHHHHh----------CCEEEEECcHH-HhCCCCCCCCCccc
Confidence            5899999998654321  11234678999999999998887653          14899988863 34322111111111


Q ss_pred             cCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCcc-chhHHHHHHHHHH----------
Q 019722          194 SRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRER-EGFITDLVFFLTS----------  262 (336)
Q Consensus       194 ~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~-~~~~~~~~~~~~~----------  262 (336)
                      .....+......|+.+|.+.+.+++...+..   +  +++..+.|+.+..+..... ......+......          
T Consensus       251 ~~~~~p~~p~s~Yg~SK~~aE~~~~~y~~~~---~--l~~~ilR~~~vYGp~~~~~~~~~i~~~i~~~l~~~~i~v~g~g  325 (436)
T PLN02166        251 WGNVNPIGERSCYDEGKRTAETLAMDYHRGA---G--VEVRIARIFNTYGPRMCLDDGRVVSNFVAQTIRKQPMTVYGDG  325 (436)
T ss_pred             cccCCCCCCCCchHHHHHHHHHHHHHHHHHh---C--CCeEEEEEccccCCCCCCCccchHHHHHHHHhcCCCcEEeCCC
Confidence            1111123334579999999999998876553   3  8888899998888753211 1112222211111          


Q ss_pred             ---hhcCChHHHHHHHHHHHhcCccccCCceeeccCcccccccCCCCHHHHHHHHHHHHHhhccCCCCCCCCC
Q 019722          263 ---KLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWTSKLGSNSNEASRLWAASELLVSRDPKSVFDPL  332 (336)
Q Consensus       263 ---~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~p~  332 (336)
                         ......+|.+.++..++..+    ..| .|+.+++...+-        .++.+.+.+.++......|.|.
T Consensus       326 ~~~rdfi~V~Dva~ai~~~~~~~----~~g-iyNIgs~~~~Si--------~ela~~I~~~~g~~~~i~~~p~  385 (436)
T PLN02166        326 KQTRSFQYVSDLVDGLVALMEGE----HVG-PFNLGNPGEFTM--------LELAEVVKETIDSSATIEFKPN  385 (436)
T ss_pred             CeEEeeEEHHHHHHHHHHHHhcC----CCc-eEEeCCCCcEeH--------HHHHHHHHHHhCCCCCeeeCCC
Confidence               11234688888888777532    234 455555444442        5555666666665544445443

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=99.60  E-value=4.9e-13  Score=125.93  Aligned_cols=182  Identities=14%  Similarity=0.087  Sum_probs=123.7

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCC
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNL  113 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  113 (336)
                      +++++|||||+|.||+++++.|.++|++|+.++|......      ...  .....++.+|+++.+.+..+++       
T Consensus        20 ~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~~------~~~--~~~~~~~~~Dl~d~~~~~~~~~-------   84 (370)
T PLN02695         20 EKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEHM------SED--MFCHEFHLVDLRVMENCLKVTK-------   84 (370)
T ss_pred             CCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEecccccc------ccc--cccceEEECCCCCHHHHHHHHh-------
Confidence            6789999999999999999999999999999998643211      000  1135678899999887766653       


Q ss_pred             CccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcccccccc
Q 019722          114 PLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQI  193 (336)
Q Consensus       114 ~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~~~  193 (336)
                      ++|+|||+|+...... ....+....+..|+.++..+++++...    +     ..++|++||.. .++.....+.....
T Consensus        85 ~~D~Vih~Aa~~~~~~-~~~~~~~~~~~~N~~~t~nll~aa~~~----~-----vk~~V~~SS~~-vYg~~~~~~~~~~~  153 (370)
T PLN02695         85 GVDHVFNLAADMGGMG-FIQSNHSVIMYNNTMISFNMLEAARIN----G-----VKRFFYASSAC-IYPEFKQLETNVSL  153 (370)
T ss_pred             CCCEEEEcccccCCcc-ccccCchhhHHHHHHHHHHHHHHHHHh----C-----CCEEEEeCchh-hcCCccccCcCCCc
Confidence            5899999998653221 111223456778999999888876532    1     25899999964 33321111000001


Q ss_pred             cCCC-CCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCC
Q 019722          194 SRNK-SHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLT  246 (336)
Q Consensus       194 ~~~~-~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~  246 (336)
                      .++. .+..+...|+.+|.+.+.+++..+..+   +  +++..+.|+.+..+..
T Consensus       154 ~E~~~~p~~p~s~Yg~sK~~~E~~~~~~~~~~---g--~~~~ilR~~~vyGp~~  202 (370)
T PLN02695        154 KESDAWPAEPQDAYGLEKLATEELCKHYTKDF---G--IECRIGRFHNIYGPFG  202 (370)
T ss_pred             CcccCCCCCCCCHHHHHHHHHHHHHHHHHHHh---C--CCEEEEEECCccCCCC
Confidence            1111 123345589999999999998877653   4  9999999999998853

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.59  E-value=3.3e-13  Score=136.61  Aligned_cols=253  Identities=14%  Similarity=0.079  Sum_probs=157.1

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHC--CCEEEEeeCCh--HHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHH
Q 019722           33 LSSVTAIITGATSGIGAETARVLAKR--GARLVLPARSL--KAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQF  108 (336)
Q Consensus        33 l~gk~~lItGgs~gIG~aia~~L~~~--G~~V~~~~r~~--~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~  108 (336)
                      .+.|++|||||+|.||++++++|+++  |++|+.++|..  ....    .+.......++.++.+|+++.+.+..++.. 
T Consensus         4 ~~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~----~l~~~~~~~~v~~~~~Dl~d~~~~~~~~~~-   78 (668)
T PLN02260          4 YEPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLK----NLNPSKSSPNFKFVKGDIASADLVNYLLIT-   78 (668)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhh----hhhhcccCCCeEEEECCCCChHHHHHHHhh-
Confidence            46789999999999999999999998  57899888753  1221    111111134789999999999887765432 


Q ss_pred             HhcCCCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccc
Q 019722          109 HSLNLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIR  188 (336)
Q Consensus       109 ~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~  188 (336)
                          .++|+|||+|+......  ...+..+.+++|+.++..+++++...-   .     -.++|++||.. .++......
T Consensus        79 ----~~~D~ViHlAa~~~~~~--~~~~~~~~~~~Nv~gt~~ll~a~~~~~---~-----vkr~I~~SS~~-vyg~~~~~~  143 (668)
T PLN02260         79 ----EGIDTIMHFAAQTHVDN--SFGNSFEFTKNNIYGTHVLLEACKVTG---Q-----IRRFIHVSTDE-VYGETDEDA  143 (668)
T ss_pred             ----cCCCEEEECCCccCchh--hhhCHHHHHHHHHHHHHHHHHHHHhcC---C-----CcEEEEEcchH-HhCCCcccc
Confidence                36999999999754321  122345678999999999988765421   0     25899999964 333211100


Q ss_pred             ccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHHHHHHHHh-----
Q 019722          189 YLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSK-----  263 (336)
Q Consensus       189 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~-----  263 (336)
                      ...  ..+.....+...|+.+|.+.+.+++.+..+.   +  +.+..+.|+.+..+-... ......+.......     
T Consensus       144 ~~~--~~E~~~~~p~~~Y~~sK~~aE~~v~~~~~~~---~--l~~vilR~~~VyGp~~~~-~~~i~~~~~~a~~g~~i~i  215 (668)
T PLN02260        144 DVG--NHEASQLLPTNPYSATKAGAEMLVMAYGRSY---G--LPVITTRGNNVYGPNQFP-EKLIPKFILLAMQGKPLPI  215 (668)
T ss_pred             ccC--ccccCCCCCCCCcHHHHHHHHHHHHHHHHHc---C--CCEEEECcccccCcCCCc-ccHHHHHHHHHhCCCCeEE
Confidence            000  0111112234469999999999999887654   3  889999999998875322 11222222211110     


Q ss_pred             --------hcCChHHHHHHHHHHHhcCccccCCceeeccCcccccccCCCCHHHHHHHHHHHHHhhccCC
Q 019722          264 --------LLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWTSKLGSNSNEASRLWAASELLVSRDP  325 (336)
Q Consensus       264 --------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~  325 (336)
                              .....+|.+.++..++...    ..|..|+..+....+-        .++.+.+.+.++..+
T Consensus       216 ~g~g~~~r~~ihV~Dva~a~~~~l~~~----~~~~vyni~~~~~~s~--------~el~~~i~~~~g~~~  273 (668)
T PLN02260        216 HGDGSNVRSYLYCEDVAEAFEVVLHKG----EVGHVYNIGTKKERRV--------IDVAKDICKLFGLDP  273 (668)
T ss_pred             ecCCCceEeeEEHHHHHHHHHHHHhcC----CCCCEEEECCCCeeEH--------HHHHHHHHHHhCCCC
Confidence                    1134688888887776532    2345555555443332        455555556666543

>CHL00194 ycf39 Ycf39; Provisional

Probab=99.58  E-value=6.8e-14  Score=129.03  Aligned_cols=223  Identities=14%  Similarity=0.058  Sum_probs=145.4

Q ss_pred             EEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCCCcc
Q 019722           37 TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLPLN  116 (336)
Q Consensus        37 ~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id  116 (336)
                      +++||||||.||++++++|+++|++|++++|+.++....    .    ...+.++.+|++|++++..+++       ++|
T Consensus         2 kIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~l----~----~~~v~~v~~Dl~d~~~l~~al~-------g~d   66 (317)
T CHL00194          2 SLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASFL----K----EWGAELVYGDLSLPETLPPSFK-------GVT   66 (317)
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhhH----h----hcCCEEEECCCCCHHHHHHHHC-------CCC
Confidence            699999999999999999999999999999997643221    1    2368899999999998877765       689


Q ss_pred             EEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcccccccccCC
Q 019722          117 LLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRN  196 (336)
Q Consensus       117 ~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~~~~~~  196 (336)
                      ++||+++...       .+.....++|+.+...+++++...    +     -.++|++||.....               
T Consensus        67 ~Vi~~~~~~~-------~~~~~~~~~~~~~~~~l~~aa~~~----g-----vkr~I~~Ss~~~~~---------------  115 (317)
T CHL00194         67 AIIDASTSRP-------SDLYNAKQIDWDGKLALIEAAKAA----K-----IKRFIFFSILNAEQ---------------  115 (317)
T ss_pred             EEEECCCCCC-------CCccchhhhhHHHHHHHHHHHHHc----C-----CCEEEEeccccccc---------------
Confidence            9999876421       123346677888887777766543    1     24899998853221               


Q ss_pred             CCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHHHH-H---HH----HhhcCCh
Q 019722          197 KSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVF-F---LT----SKLLKTI  268 (336)
Q Consensus       197 ~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~-~---~~----~~~~~~~  268 (336)
                         + +...|..+|...+.+.+.       .+  +.+..+.|+.+..++....   ...... .   +.    .......
T Consensus       116 ---~-~~~~~~~~K~~~e~~l~~-------~~--l~~tilRp~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~i~v  179 (317)
T CHL00194        116 ---Y-PYIPLMKLKSDIEQKLKK-------SG--IPYTIFRLAGFFQGLISQY---AIPILEKQPIWITNESTPISYIDT  179 (317)
T ss_pred             ---c-CCChHHHHHHHHHHHHHH-------cC--CCeEEEeecHHhhhhhhhh---hhhhccCCceEecCCCCccCccCH
Confidence               1 112477888887765432       24  8888899986543321110   000000 0   00    0111345


Q ss_pred             HHHHHHHHHHHhcCccccCCceeeccCcccccccCCCCHHHHHHHHHHHHHhhccCCCCCCCCC
Q 019722          269 PQGAATTCYVAIHPRLVNVSGKYFADCNEAWTSKLGSNSNEASRLWAASELLVSRDPKSVFDPL  332 (336)
Q Consensus       269 ~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~p~  332 (336)
                      +|+|..++.++..+..   .|+.|+..+....+-        +++-+.+.++++.+....+.|.
T Consensus       180 ~Dva~~~~~~l~~~~~---~~~~~ni~g~~~~s~--------~el~~~~~~~~g~~~~~~~vp~  232 (317)
T CHL00194        180 QDAAKFCLKSLSLPET---KNKTFPLVGPKSWNS--------SEIISLCEQLSGQKAKISRVPL  232 (317)
T ss_pred             HHHHHHHHHHhcCccc---cCcEEEecCCCccCH--------HHHHHHHHHHhCCCCeEEeCCH
Confidence            8889998888864432   477777777655553        6666667777777655555554

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=99.58  E-value=8e-13  Score=119.93  Aligned_cols=220  Identities=18%  Similarity=0.148  Sum_probs=142.3

Q ss_pred             EEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCCCcc
Q 019722           37 TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLPLN  116 (336)
Q Consensus        37 ~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id  116 (336)
                      ++|||||+|.||.+++++|+++|++|+++.|+                       .+|+.+.+++.++++..     .+|
T Consensus         1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~-----------------------~~d~~~~~~~~~~~~~~-----~~d   52 (287)
T TIGR01214         1 RILITGANGQLGRELVQQLSPEGRVVVALTSS-----------------------QLDLTDPEALERLLRAI-----RPD   52 (287)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc-----------------------ccCCCCHHHHHHHHHhC-----CCC
Confidence            37999999999999999999999999999885                       46999999988887642     589


Q ss_pred             EEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcccccccccCC
Q 019722          117 LLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRN  196 (336)
Q Consensus       117 ~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~~~~~~  196 (336)
                      ++||+|+......  .....+..+++|+.+...+++++...          +.++|++||... ++.....++++     
T Consensus        53 ~vi~~a~~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~----------~~~~v~~Ss~~v-y~~~~~~~~~E-----  114 (287)
T TIGR01214        53 AVVNTAAYTDVDG--AESDPEKAFAVNALAPQNLARAAARH----------GARLVHISTDYV-FDGEGKRPYRE-----  114 (287)
T ss_pred             EEEECCccccccc--cccCHHHHHHHHHHHHHHHHHHHHHc----------CCeEEEEeeeee-ecCCCCCCCCC-----
Confidence            9999999653221  22345678899999999998886431          248999998632 22111111111     


Q ss_pred             CCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHHHHHHHHh-----------hc
Q 019722          197 KSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSK-----------LL  265 (336)
Q Consensus       197 ~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~-----------~~  265 (336)
                      .....+...|+.+|.+.+.+++.+       +  .++..+.|+.+..+....  .+...........           ..
T Consensus       115 ~~~~~~~~~Y~~~K~~~E~~~~~~-------~--~~~~ilR~~~v~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (287)
T TIGR01214       115 DDATNPLNVYGQSKLAGEQAIRAA-------G--PNALIVRTSWLYGGGGGR--NFVRTMLRLAGRGEELRVVDDQIGSP  183 (287)
T ss_pred             CCCCCCcchhhHHHHHHHHHHHHh-------C--CCeEEEEeeecccCCCCC--CHHHHHHHHhhcCCCceEecCCCcCC
Confidence            111223457999999999888764       3  578899999998876321  1122222211110           11


Q ss_pred             CChHHHHHHHHHHHhcCccccCCceeeccCcccccccCCCCHHHHHHHHHHHHHhhccC
Q 019722          266 KTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWTSKLGSNSNEASRLWAASELLVSRD  324 (336)
Q Consensus       266 ~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~  324 (336)
                      ...+|++.++..++..+..  ..| .|+..+....+.        .++++.+.+.++..
T Consensus       184 v~v~Dva~a~~~~~~~~~~--~~~-~~ni~~~~~~s~--------~e~~~~i~~~~~~~  231 (287)
T TIGR01214       184 TYAKDLARVIAALLQRLAR--ARG-VYHLANSGQCSW--------YEFAQAIFEEAGAD  231 (287)
T ss_pred             cCHHHHHHHHHHHHhhccC--CCC-eEEEECCCCcCH--------HHHHHHHHHHhCcc
Confidence            2357889888888864321  234 444444433332        45555555555544

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

Probab=99.56  E-value=1.2e-12  Score=120.13  Aligned_cols=172  Identities=14%  Similarity=0.126  Sum_probs=114.8

Q ss_pred             EEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHh--cCCCc
Q 019722           38 AIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHS--LNLPL  115 (336)
Q Consensus        38 ~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~--~~~~i  115 (336)
                      +|||||+|.||++++++|+++|++++++.|+.......            ....++|+.|....+.+++.+.+  .++++
T Consensus         2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~~~~~~~------------~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~   69 (308)
T PRK11150          2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKF------------VNLVDLDIADYMDKEDFLAQIMAGDDFGDI   69 (308)
T ss_pred             EEEecCCcHHHHHHHHHHHhCCCceEEEecCCCcchHH------------HhhhhhhhhhhhhHHHHHHHHhcccccCCc
Confidence            79999999999999999999999766666554322110            01234567766666666665542  34579


Q ss_pred             cEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcccccccccC
Q 019722          116 NLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISR  195 (336)
Q Consensus       116 d~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~~~~~  195 (336)
                      |+|||+|+..... ..   +.+..++.|+.++..+++++...          +.++|++||.. .++.....     ..+
T Consensus        70 d~Vih~A~~~~~~-~~---~~~~~~~~n~~~t~~ll~~~~~~----------~~~~i~~SS~~-vyg~~~~~-----~~~  129 (308)
T PRK11150         70 EAIFHEGACSSTT-EW---DGKYMMDNNYQYSKELLHYCLER----------EIPFLYASSAA-TYGGRTDD-----FIE  129 (308)
T ss_pred             cEEEECceecCCc-CC---ChHHHHHHHHHHHHHHHHHHHHc----------CCcEEEEcchH-HhCcCCCC-----CCc
Confidence            9999999854332 11   22457899999999988887532          24789988874 33321111     111


Q ss_pred             CCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCC
Q 019722          196 NKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLT  246 (336)
Q Consensus       196 ~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~  246 (336)
                      +.....+...|+.+|.+.+.+++.++.+.   +  +.+..+.|+.+..+..
T Consensus       130 E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~--~~~~~lR~~~vyG~~~  175 (308)
T PRK11150        130 EREYEKPLNVYGYSKFLFDEYVRQILPEA---N--SQICGFRYFNVYGPRE  175 (308)
T ss_pred             cCCCCCCCCHHHHHHHHHHHHHHHHHHHc---C--CCEEEEeeeeecCCCC
Confidence            11112334579999999999988876542   3  8999999999988754

>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

Probab=99.54  E-value=1.3e-12  Score=119.63  Aligned_cols=164  Identities=14%  Similarity=0.056  Sum_probs=113.7

Q ss_pred             EEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCCCccEE
Q 019722           39 IITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLPLNLL  118 (336)
Q Consensus        39 lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~l  118 (336)
                      |||||+|.||.++++.|+++|++|+++.+.                      ..+|+++.++++.+++..     ++|+|
T Consensus         1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~~----------------------~~~Dl~~~~~l~~~~~~~-----~~d~V   53 (306)
T PLN02725          1 FVAGHRGLVGSAIVRKLEALGFTNLVLRTH----------------------KELDLTRQADVEAFFAKE-----KPTYV   53 (306)
T ss_pred             CcccCCCcccHHHHHHHHhCCCcEEEeecc----------------------ccCCCCCHHHHHHHHhcc-----CCCEE
Confidence            699999999999999999999987765432                      147999999888887642     58999


Q ss_pred             EEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcccccccccCCCC
Q 019722          119 INNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKS  198 (336)
Q Consensus       119 v~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~~~~~~~~  198 (336)
                      ||+|+....... ..+..++.+++|+.++..+++++...-         -+++|++||.. .++.....++++....+..
T Consensus        54 ih~A~~~~~~~~-~~~~~~~~~~~n~~~~~~ll~~~~~~~---------~~~~i~~SS~~-vyg~~~~~~~~E~~~~~~~  122 (306)
T PLN02725         54 ILAAAKVGGIHA-NMTYPADFIRENLQIQTNVIDAAYRHG---------VKKLLFLGSSC-IYPKFAPQPIPETALLTGP  122 (306)
T ss_pred             EEeeeeecccch-hhhCcHHHHHHHhHHHHHHHHHHHHcC---------CCeEEEeCcee-ecCCCCCCCCCHHHhccCC
Confidence            999997532111 112345678899999999888886531         25899999964 3332211112111100000


Q ss_pred             CCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCC
Q 019722          199 HYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRL  245 (336)
Q Consensus       199 ~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~  245 (336)
                      ..+....|+.+|.+.+.+++.+.++.   +  +++..+.|+.+..+.
T Consensus       123 ~~p~~~~Y~~sK~~~e~~~~~~~~~~---~--~~~~~~R~~~vyG~~  164 (306)
T PLN02725        123 PEPTNEWYAIAKIAGIKMCQAYRIQY---G--WDAISGMPTNLYGPH  164 (306)
T ss_pred             CCCCcchHHHHHHHHHHHHHHHHHHh---C--CCEEEEEecceeCCC
Confidence            12223359999999999888877654   3  899999999998875

>PLN02996 fatty acyl-CoA reductase

Probab=99.46  E-value=1.1e-11  Score=120.60  Aligned_cols=260  Identities=12%  Similarity=0.082  Sum_probs=155.1

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCC---EEEEeeCChHH---HHHH---------HHHHHhhCC-------CCceEE
Q 019722           33 LSSVTAIITGATSGIGAETARVLAKRGA---RLVLPARSLKA---AEEA---------KARLASDCP-------GSDIVV   90 (336)
Q Consensus        33 l~gk~~lItGgs~gIG~aia~~L~~~G~---~V~~~~r~~~~---~~~~---------~~~l~~~~~-------~~~~~~   90 (336)
                      ++||+++||||||.||.+++.+|++.+.   +|+++.|....   .+.+         .+.+++..+       ..++.+
T Consensus         9 ~~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~~   88 (491)
T PLN02996          9 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVTP   88 (491)
T ss_pred             hCCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEEE
Confidence            6899999999999999999999998652   68888886531   1111         111122111       157999


Q ss_pred             EeccCCCH-------HHHHHHHHHHHhcCCCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhc
Q 019722           91 LPLDLSSL-------SSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAK  163 (336)
Q Consensus        91 ~~~Dl~~~-------~~v~~~~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~  163 (336)
                      +.+|++++       +.++.+++       .+|+|||+|+.....     +..+..+++|+.|+..+++++...-   . 
T Consensus        89 i~GDl~~~~LGLs~~~~~~~l~~-------~vD~ViH~AA~v~~~-----~~~~~~~~~Nv~gt~~ll~~a~~~~---~-  152 (491)
T PLN02996         89 VPGDISYDDLGVKDSNLREEMWK-------EIDIVVNLAATTNFD-----ERYDVALGINTLGALNVLNFAKKCV---K-  152 (491)
T ss_pred             EecccCCcCCCCChHHHHHHHHh-------CCCEEEECccccCCc-----CCHHHHHHHHHHHHHHHHHHHHhcC---C-
Confidence            99999843       33444443       589999999976432     3567789999999999988876531   1 


Q ss_pred             cCCCCCeEEEEcCCccccccC---Ccccccccc----------------------------c--------------CCCC
Q 019722          164 ATGIQGRIVNVSSSIHSWFSG---DMIRYLGQI----------------------------S--------------RNKS  198 (336)
Q Consensus       164 ~~~~~grIV~vsS~~~~~~~~---~~~~~~~~~----------------------------~--------------~~~~  198 (336)
                          -.++|++||....-...   ....+....                            .              +...
T Consensus       153 ----~k~~V~vST~~vyG~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (491)
T PLN02996        153 ----VKMLLHVSTAYVCGEKSGLILEKPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAK  228 (491)
T ss_pred             ----CCeEEEEeeeEEecCCCceeeeecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhHHH
Confidence                24889988865321111   011111000                            0              0000


Q ss_pred             CCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHH------HHHHHHH----------
Q 019722          199 HYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITD------LVFFLTS----------  262 (336)
Q Consensus       199 ~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~------~~~~~~~----------  262 (336)
                      .......|+.||++.|.+++..+     .+  +.+..+.|..|.++......++...      .......          
T Consensus       229 ~~~~pn~Y~~TK~~aE~lv~~~~-----~~--lpv~i~RP~~V~G~~~~p~~gwi~~~~~~~~i~~~~~~g~~~~~~gdg  301 (491)
T PLN02996        229 LHGWPNTYVFTKAMGEMLLGNFK-----EN--LPLVIIRPTMITSTYKEPFPGWIEGLRTIDSVIVGYGKGKLTCFLADP  301 (491)
T ss_pred             hCCCCCchHhhHHHHHHHHHHhc-----CC--CCEEEECCCEeccCCcCCCCCcccchhhHHHHHHHhccceEeEEecCC
Confidence            01112359999999999997643     14  9999999999988875554333221      1110111          


Q ss_pred             ---hhcCChHHHHHHHHHHHhcCccccCCceeeccCcc--cccccCCCCHHHHHHHHHHHHHhhccCCCC
Q 019722          263 ---KLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNE--AWTSKLGSNSNEASRLWAASELLVSRDPKS  327 (336)
Q Consensus       263 ---~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~--~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~  327 (336)
                         .-...+++++.+++.++.........+..|+.+..  ...+        ..++-+.+.+..+..|..
T Consensus       302 ~~~~D~v~Vddvv~a~l~a~~~~~~~~~~~~vYNi~s~~~~~~s--------~~ei~~~~~~~~~~~p~~  363 (491)
T PLN02996        302 NSVLDVIPADMVVNAMIVAMAAHAGGQGSEIIYHVGSSLKNPVK--------FSNLHDFAYRYFSKNPWI  363 (491)
T ss_pred             CeecceecccHHHHHHHHHHHHhhccCCCCcEEEecCCCCCccc--------HHHHHHHHHHHhhhCCCc
Confidence               11134477888887777532111113566666654  3322        255555565666676664

>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]

Probab=99.45  E-value=2.3e-12  Score=114.47  Aligned_cols=182  Identities=16%  Similarity=0.138  Sum_probs=131.9

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCC-CCceEEEeccCCCHHHHHHHHHHHHhcCC
Q 019722           35 SVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCP-GSDIVVLPLDLSSLSSVRNFVSQFHSLNL  113 (336)
Q Consensus        35 gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  113 (336)
                      +++||||||+|.||++.+.+|+++|+.|++++.-.....+....++.... +.++.+++.|+.|...+++++++.     
T Consensus         2 ~~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~-----   76 (343)
T KOG1371|consen    2 GKHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSEV-----   76 (343)
T ss_pred             CcEEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhhc-----
Confidence            58999999999999999999999999999998544444444444444332 478999999999999999999865     


Q ss_pred             CccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcccccccc
Q 019722          114 PLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQI  193 (336)
Q Consensus       114 ~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~~~  193 (336)
                      ++|.|+|-|+...-.+  +.+....+.+.|+.|.+.++.....+-         ...+|+.||+ +.++.+...++.+..
T Consensus        77 ~fd~V~Hfa~~~~vge--S~~~p~~Y~~nNi~gtlnlLe~~~~~~---------~~~~V~sssa-tvYG~p~~ip~te~~  144 (343)
T KOG1371|consen   77 KFDAVMHFAALAAVGE--SMENPLSYYHNNIAGTLNLLEVMKAHN---------VKALVFSSSA-TVYGLPTKVPITEED  144 (343)
T ss_pred             CCceEEeehhhhccch--hhhCchhheehhhhhHHHHHHHHHHcC---------CceEEEecce-eeecCcceeeccCcC
Confidence            6999999998644322  334447889999999999887766543         2467776664 566655554444422


Q ss_pred             cCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEee
Q 019722          194 SRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVH  237 (336)
Q Consensus       194 ~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~  237 (336)
                      ..+    .+...|+.+|.+++...+...+.+...-..+|...+.
T Consensus       145 ~t~----~p~~pyg~tK~~iE~i~~d~~~~~~~~~~~LRyfn~~  184 (343)
T KOG1371|consen  145 PTD----QPTNPYGKTKKAIEEIIHDYNKAYGWKVTGLRYFNVI  184 (343)
T ss_pred             CCC----CCCCcchhhhHHHHHHHHhhhccccceEEEEEecccc
Confidence            211    2456799999999999999888766332234444433

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.44  E-value=3.9e-11  Score=121.38  Aligned_cols=246  Identities=15%  Similarity=0.091  Sum_probs=145.8

Q ss_pred             EEEEeCCCChHHHHHHHHHH--HCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHH--HHHHHHHHHhcC
Q 019722           37 TAIITGATSGIGAETARVLA--KRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSS--VRNFVSQFHSLN  112 (336)
Q Consensus        37 ~~lItGgs~gIG~aia~~L~--~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~--v~~~~~~~~~~~  112 (336)
                      ++|||||+|.||++++++|+  ++|++|++++|+... .. ...+.......++.++.+|++++..  .....+++    
T Consensus         2 ~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~-~~-~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~l----   75 (657)
T PRK07201          2 RYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSL-SR-LEALAAYWGADRVVPLVGDLTEPGLGLSEADIAEL----   75 (657)
T ss_pred             eEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchH-HH-HHHHHHhcCCCcEEEEecccCCccCCcCHHHHHHh----
Confidence            69999999999999999999  588999999997532 11 1222222212578999999998532  11122222    


Q ss_pred             CCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccccccc
Q 019722          113 LPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQ  192 (336)
Q Consensus       113 ~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~~  192 (336)
                      .++|++||+|+.....     .......++|+.+...+++++...    +     ..++|++||.... +... ..+.+.
T Consensus        76 ~~~D~Vih~Aa~~~~~-----~~~~~~~~~nv~gt~~ll~~a~~~----~-----~~~~v~~SS~~v~-g~~~-~~~~e~  139 (657)
T PRK07201         76 GDIDHVVHLAAIYDLT-----ADEEAQRAANVDGTRNVVELAERL----Q-----AATFHHVSSIAVA-GDYE-GVFRED  139 (657)
T ss_pred             cCCCEEEECceeecCC-----CCHHHHHHHHhHHHHHHHHHHHhc----C-----CCeEEEEeccccc-cCcc-Cccccc
Confidence            3799999999965322     234567789999988888776532    1     2589999986542 2111 011111


Q ss_pred             ccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCc----cch--hHHHHHHHHHH----
Q 019722          193 ISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRE----REG--FITDLVFFLTS----  262 (336)
Q Consensus       193 ~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~----~~~--~~~~~~~~~~~----  262 (336)
                      ....  .......|+.+|...+.+++.      ..+  +++..+.|+.+.++....    ...  ........+..    
T Consensus       140 ~~~~--~~~~~~~Y~~sK~~~E~~~~~------~~g--~~~~ilRp~~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  209 (657)
T PRK07201        140 DFDE--GQGLPTPYHRTKFEAEKLVRE------ECG--LPWRVYRPAVVVGDSRTGEMDKIDGPYYFFKVLAKLAKLPSW  209 (657)
T ss_pred             cchh--hcCCCCchHHHHHHHHHHHHH------cCC--CcEEEEcCCeeeecCCCCccccCCcHHHHHHHHHHhccCCcc
Confidence            0000  011234699999999988753      124  899999999998753211    000  11111111100    


Q ss_pred             ----------hhcCChHHHHHHHHHHHhcCccccCCceeeccCcccccccCCCCHHHHHHHHHHHHHhhccCC
Q 019722          263 ----------KLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWTSKLGSNSNEASRLWAASELLVSRDP  325 (336)
Q Consensus       263 ----------~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~  325 (336)
                                ......++++.++..++..+.   ..|+.|+..+....+-        .++.+.+.+.++.++
T Consensus       210 ~~~~~~~~~~~~~v~vddva~ai~~~~~~~~---~~g~~~ni~~~~~~s~--------~el~~~i~~~~g~~~  271 (657)
T PRK07201        210 LPMVGPDGGRTNIVPVDYVADALDHLMHKDG---RDGQTFHLTDPKPQRV--------GDIYNAFARAAGAPP  271 (657)
T ss_pred             cccccCCCCeeeeeeHHHHHHHHHHHhcCcC---CCCCEEEeCCCCCCcH--------HHHHHHHHHHhCCCc
Confidence                      011235777888877775322   3577776665543332        445555555555544

>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]

Probab=99.43  E-value=4.8e-12  Score=116.15  Aligned_cols=255  Identities=11%  Similarity=0.028  Sum_probs=162.5

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCC--CEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHh
Q 019722           33 LSSVTAIITGATSGIGAETARVLAKRG--ARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHS  110 (336)
Q Consensus        33 l~gk~~lItGgs~gIG~aia~~L~~~G--~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  110 (336)
                      .++.+++||||+|.+|.+++++|.+++  .+|.+++..+....-..+.. .. ...++.++++|+.+..++.+.++    
T Consensus         2 ~~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~-~~-~~~~v~~~~~D~~~~~~i~~a~~----   75 (361)
T KOG1430|consen    2 EKKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELT-GF-RSGRVTVILGDLLDANSISNAFQ----   75 (361)
T ss_pred             CcCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhh-cc-cCCceeEEecchhhhhhhhhhcc----
Confidence            357899999999999999999999999  68999987664111111111 00 14689999999999999988776    


Q ss_pred             cCCCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccccc
Q 019722          111 LNLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYL  190 (336)
Q Consensus       111 ~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~  190 (336)
                         +. ++||+|+...+.  ....+-+..+++|+.|+..++.++...-.         .++|++||..-..+..+     
T Consensus        76 ---~~-~Vvh~aa~~~~~--~~~~~~~~~~~vNV~gT~nvi~~c~~~~v---------~~lIYtSs~~Vvf~g~~-----  135 (361)
T KOG1430|consen   76 ---GA-VVVHCAASPVPD--FVENDRDLAMRVNVNGTLNVIEACKELGV---------KRLIYTSSAYVVFGGEP-----  135 (361)
T ss_pred             ---Cc-eEEEeccccCcc--ccccchhhheeecchhHHHHHHHHHHhCC---------CEEEEecCceEEeCCee-----
Confidence               56 677777654332  22335678899999998888887776543         59999999765443222     


Q ss_pred             ccccCCCCCCC--hhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHHHHHHHHhhcC--
Q 019722          191 GQISRNKSHYD--ATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSKLLK--  266 (336)
Q Consensus       191 ~~~~~~~~~~~--~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~--  266 (336)
                      ..+.+++-+.+  ....|+.||+-.|.+++....   .  ......++.|-.+..|--.................+..  
T Consensus       136 ~~n~~E~~p~p~~~~d~Y~~sKa~aE~~Vl~an~---~--~~l~T~aLR~~~IYGpgd~~~~~~i~~~~~~g~~~f~~g~  210 (361)
T KOG1430|consen  136 IINGDESLPYPLKHIDPYGESKALAEKLVLEANG---S--DDLYTCALRPPGIYGPGDKRLLPKIVEALKNGGFLFKIGD  210 (361)
T ss_pred             cccCCCCCCCccccccccchHHHHHHHHHHHhcC---C--CCeeEEEEccccccCCCCccccHHHHHHHHccCceEEeec
Confidence            11122222222  335899999999998888664   2  23999999999999997776433222222111111100  


Q ss_pred             --------ChHHHHHHHH--HHHhcCccccCCceeeccCcccccccCCCCHHHHHHHHHHHHHhhccCCC
Q 019722          267 --------TIPQGAATTC--YVAIHPRLVNVSGKYFADCNEAWTSKLGSNSNEASRLWAASELLVSRDPK  326 (336)
Q Consensus       267 --------~~~~~a~~~~--~l~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~  326 (336)
                              ..+.++.+-+  ..........++|+.+..+++.....        =.+|..+.+.+|-..+
T Consensus       211 ~~~~~~~~~~~Nva~ahilA~~aL~~~~~~~~Gq~yfI~d~~p~~~--------~~~~~~l~~~lg~~~~  272 (361)
T KOG1430|consen  211 GENLNDFTYGENVAWAHILAARALLDKSPSVNGQFYFITDDTPVRF--------FDFLSPLVKALGYCLP  272 (361)
T ss_pred             cccccceEEechhHHHHHHHHHHHHhcCCccCceEEEEeCCCcchh--------hHHHHHHHHhcCCCCC
Confidence                    1121222211  11222244567998887777765553        4556666677777766

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=99.43  E-value=5.4e-12  Score=115.41  Aligned_cols=157  Identities=18%  Similarity=0.130  Sum_probs=110.6

Q ss_pred             EEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCCCcc
Q 019722           37 TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLPLN  116 (336)
Q Consensus        37 ~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id  116 (336)
                      ++|||||+|.||++++++|+++| +|+.++|...                   .+..|++|.+.+.++++..     ++|
T Consensus         2 ~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~~-------------------~~~~Dl~d~~~~~~~~~~~-----~~D   56 (299)
T PRK09987          2 NILLFGKTGQVGWELQRALAPLG-NLIALDVHST-------------------DYCGDFSNPEGVAETVRKI-----RPD   56 (299)
T ss_pred             eEEEECCCCHHHHHHHHHhhccC-CEEEeccccc-------------------cccCCCCCHHHHHHHHHhc-----CCC
Confidence            69999999999999999999999 7888887521                   2457999999998887742     589


Q ss_pred             EEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcccccccccCC
Q 019722          117 LLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRN  196 (336)
Q Consensus       117 ~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~~~~~~  196 (336)
                      +|||+|+......  ..++.+..+.+|+.++..+++++...          +.++|++||..- ++.....++++     
T Consensus        57 ~Vih~Aa~~~~~~--~~~~~~~~~~~N~~~~~~l~~aa~~~----------g~~~v~~Ss~~V-y~~~~~~p~~E-----  118 (299)
T PRK09987         57 VIVNAAAHTAVDK--AESEPEFAQLLNATSVEAIAKAANEV----------GAWVVHYSTDYV-FPGTGDIPWQE-----  118 (299)
T ss_pred             EEEECCccCCcch--hhcCHHHHHHHHHHHHHHHHHHHHHc----------CCeEEEEccceE-ECCCCCCCcCC-----
Confidence            9999999754321  22334567789999999998877653          248898888543 32111111211     


Q ss_pred             CCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCC
Q 019722          197 KSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRL  245 (336)
Q Consensus       197 ~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~  245 (336)
                      .....+...|+.+|.+.+.+++...         .+...+.|+++..+.
T Consensus       119 ~~~~~P~~~Yg~sK~~~E~~~~~~~---------~~~~ilR~~~vyGp~  158 (299)
T PRK09987        119 TDATAPLNVYGETKLAGEKALQEHC---------AKHLIFRTSWVYAGK  158 (299)
T ss_pred             CCCCCCCCHHHHHHHHHHHHHHHhC---------CCEEEEecceecCCC
Confidence            1123344579999999999886542         234777788887764

>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila

Probab=99.41  E-value=2e-12  Score=115.16  Aligned_cols=180  Identities=21%  Similarity=0.152  Sum_probs=102.5

Q ss_pred             EeCCCChHHHHHHHHHHHCCC--EEEEeeCChHH---HHHHHHHHHhhC--------CCCceEEEeccCCCHH-HH-HHH
Q 019722           40 ITGATSGIGAETARVLAKRGA--RLVLPARSLKA---AEEAKARLASDC--------PGSDIVVLPLDLSSLS-SV-RNF  104 (336)
Q Consensus        40 ItGgs~gIG~aia~~L~~~G~--~V~~~~r~~~~---~~~~~~~l~~~~--------~~~~~~~~~~Dl~~~~-~v-~~~  104 (336)
                      ||||||.||.+++.+|++++.  +|+++.|..+.   .+++.+.+....        ...+++++.+|++++. .+ ...
T Consensus         1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~   80 (249)
T PF07993_consen    1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDED   80 (249)
T ss_dssp             EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHH
T ss_pred             CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHH
Confidence            799999999999999999986  89999997632   222322222110        1469999999999864 11 122


Q ss_pred             HHHHHhcCCCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccC
Q 019722          105 VSQFHSLNLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSG  184 (336)
Q Consensus       105 ~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~  184 (336)
                      .+++.+   .+|++||||+.....     ..+++..++|+.|+..+++.+...-         ..+++++||. ...+..
T Consensus        81 ~~~L~~---~v~~IiH~Aa~v~~~-----~~~~~~~~~NV~gt~~ll~la~~~~---------~~~~~~iSTa-~v~~~~  142 (249)
T PF07993_consen   81 YQELAE---EVDVIIHCAASVNFN-----APYSELRAVNVDGTRNLLRLAAQGK---------RKRFHYISTA-YVAGSR  142 (249)
T ss_dssp             HHHHHH---H--EEEE--SS-SBS------S--EEHHHHHHHHHHHHHHHTSSS------------EEEEEEG-GGTTS-
T ss_pred             hhcccc---ccceeeecchhhhhc-----ccchhhhhhHHHHHHHHHHHHHhcc---------CcceEEeccc-cccCCC
Confidence            222322   589999999976543     2456688899999999998887311         2489999993 222211


Q ss_pred             C-ccc-----ccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCC
Q 019722          185 D-MIR-----YLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTR  244 (336)
Q Consensus       185 ~-~~~-----~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~  244 (336)
                      . ...     .........  ......|..||...|.+++..+.+.   |  +.+..+.||.+-+.
T Consensus       143 ~~~~~~~~~~~~~~~~~~~--~~~~~gY~~SK~~aE~~l~~a~~~~---g--~p~~I~Rp~~i~g~  201 (249)
T PF07993_consen  143 PGTIEEKVYPEEEDDLDPP--QGFPNGYEQSKWVAERLLREAAQRH---G--LPVTIYRPGIIVGD  201 (249)
T ss_dssp             TTT--SSS-HHH--EEE----TTSEE-HHHHHHHHHHHHHHHHHHH--------EEEEEE-EEE-S
T ss_pred             CCcccccccccccccchhh--ccCCccHHHHHHHHHHHHHHHHhcC---C--ceEEEEecCccccc
Confidence            1 000     011111111  2334489999999999999988653   3  89999999999773

A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=99.41  E-value=1.4e-11  Score=104.15  Aligned_cols=182  Identities=18%  Similarity=0.134  Sum_probs=125.3

Q ss_pred             EEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCCCccE
Q 019722           38 AIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLPLNL  117 (336)
Q Consensus        38 ~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~  117 (336)
                      ++|+||||.+|..++++|+++|++|+++.|++++.++          ..++.++++|+.|++++.++++       +.|+
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~----------~~~~~~~~~d~~d~~~~~~al~-------~~d~   63 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED----------SPGVEIIQGDLFDPDSVKAALK-------GADA   63 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH----------CTTEEEEESCTTCHHHHHHHHT-------TSSE
T ss_pred             eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc----------ccccccceeeehhhhhhhhhhh-------hcch
Confidence            6899999999999999999999999999999987665          3589999999999988888776       6899


Q ss_pred             EEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcccccccccCCC
Q 019722          118 LINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNK  197 (336)
Q Consensus       118 lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~~~~~~~  197 (336)
                      +|+++|....       +            ...++.++..+++.+     -.++|++|+...............      
T Consensus        64 vi~~~~~~~~-------~------------~~~~~~~~~a~~~~~-----~~~~v~~s~~~~~~~~~~~~~~~~------  113 (183)
T PF13460_consen   64 VIHAAGPPPK-------D------------VDAAKNIIEAAKKAG-----VKRVVYLSSAGVYRDPPGLFSDED------  113 (183)
T ss_dssp             EEECCHSTTT-------H------------HHHHHHHHHHHHHTT-----SSEEEEEEETTGTTTCTSEEEGGT------
T ss_pred             hhhhhhhhcc-------c------------ccccccccccccccc-----cccceeeeccccCCCCCccccccc------
Confidence            9999975322       1            445666666666654     369999998764432111100000      


Q ss_pred             CCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHHHHHHHHhhcCChHHHHHHHHH
Q 019722          198 SHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSKLLKTIPQGAATTCY  277 (336)
Q Consensus       198 ~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~  277 (336)
                        .+....|...|...+.+.       ...+  ++...++|+++..+..... .....  .........+.+|+|..++.
T Consensus       114 --~~~~~~~~~~~~~~e~~~-------~~~~--~~~~ivrp~~~~~~~~~~~-~~~~~--~~~~~~~~i~~~DvA~~~~~  179 (183)
T PF13460_consen  114 --KPIFPEYARDKREAEEAL-------RESG--LNWTIVRPGWIYGNPSRSY-RLIKE--GGPQGVNFISREDVAKAIVE  179 (183)
T ss_dssp             --CGGGHHHHHHHHHHHHHH-------HHST--SEEEEEEESEEEBTTSSSE-EEESS--TSTTSHCEEEHHHHHHHHHH
T ss_pred             --ccchhhhHHHHHHHHHHH-------HhcC--CCEEEEECcEeEeCCCcce-eEEec--cCCCCcCcCCHHHHHHHHHH
Confidence              223356777776665444       1224  9999999999987764422 11110  00011234567888988888


Q ss_pred             HHh
Q 019722          278 VAI  280 (336)
Q Consensus       278 l~~  280 (336)
                      ++.
T Consensus       180 ~l~  182 (183)
T PF13460_consen  180 ALE  182 (183)
T ss_dssp             HHH
T ss_pred             HhC
Confidence            774

...

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=99.33  E-value=3.4e-11  Score=109.41  Aligned_cols=207  Identities=19%  Similarity=0.153  Sum_probs=126.8

Q ss_pred             EEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCCCcc
Q 019722           37 TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLPLN  116 (336)
Q Consensus        37 ~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id  116 (336)
                      ++|||||+|-||.++++.|.++|++|+.++|+                       .+|++|.+++.+++++.     ++|
T Consensus         2 riLI~GasG~lG~~l~~~l~~~~~~v~~~~r~-----------------------~~dl~d~~~~~~~~~~~-----~pd   53 (286)
T PF04321_consen    2 RILITGASGFLGSALARALKERGYEVIATSRS-----------------------DLDLTDPEAVAKLLEAF-----KPD   53 (286)
T ss_dssp             EEEEETTTSHHHHHHHHHHTTTSEEEEEESTT-----------------------CS-TTSHHHHHHHHHHH-------S
T ss_pred             EEEEECCCCHHHHHHHHHHhhCCCEEEEeCch-----------------------hcCCCCHHHHHHHHHHh-----CCC
Confidence            68999999999999999999999999999777                       77999999999999876     689


Q ss_pred             EEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcccccccccCC
Q 019722          117 LLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRN  196 (336)
Q Consensus       117 ~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~~~~~~  196 (336)
                      +|||+||+....  ..+.+-+..+.+|+.++..+++.+...          +.++|++||..-.-+. ...+|    .++
T Consensus        54 ~Vin~aa~~~~~--~ce~~p~~a~~iN~~~~~~la~~~~~~----------~~~li~~STd~VFdG~-~~~~y----~E~  116 (286)
T PF04321_consen   54 VVINCAAYTNVD--ACEKNPEEAYAINVDATKNLAEACKER----------GARLIHISTDYVFDGD-KGGPY----TED  116 (286)
T ss_dssp             EEEE------HH--HHHHSHHHHHHHHTHHHHHHHHHHHHC----------T-EEEEEEEGGGS-SS-TSSSB-----TT
T ss_pred             eEeccceeecHH--hhhhChhhhHHHhhHHHHHHHHHHHHc----------CCcEEEeeccEEEcCC-ccccc----ccC
Confidence            999999975321  233456678999999999988888753          3699999996433221 01111    111


Q ss_pred             CCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHHHHHHHHhh-----------c
Q 019722          197 KSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSKL-----------L  265 (336)
Q Consensus       197 ~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~-----------~  265 (336)
                      + ...+...|+.+|+..|..++...         =+...+.++++..+-..   .+............           .
T Consensus       117 d-~~~P~~~YG~~K~~~E~~v~~~~---------~~~~IlR~~~~~g~~~~---~~~~~~~~~~~~~~~i~~~~d~~~~p  183 (286)
T PF04321_consen  117 D-PPNPLNVYGRSKLEGEQAVRAAC---------PNALILRTSWVYGPSGR---NFLRWLLRRLRQGEPIKLFDDQYRSP  183 (286)
T ss_dssp             S-----SSHHHHHHHHHHHHHHHH----------SSEEEEEE-SEESSSSS---SHHHHHHHHHHCTSEEEEESSCEE--
T ss_pred             C-CCCCCCHHHHHHHHHHHHHHHhc---------CCEEEEecceecccCCC---chhhhHHHHHhcCCeeEeeCCceeCC
Confidence            1 13445689999999998877621         25667788888877222   23433333332110           1


Q ss_pred             CChHHHHHHHHHHHhcCccccCCceeeccCcccccc
Q 019722          266 KTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWTS  301 (336)
Q Consensus       266 ~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~~  301 (336)
                      ...++.|..++.++......-...-.|..++....+
T Consensus       184 ~~~~dlA~~i~~l~~~~~~~~~~~Giyh~~~~~~~S  219 (286)
T PF04321_consen  184 TYVDDLARVILELIEKNLSGASPWGIYHLSGPERVS  219 (286)
T ss_dssp             EEHHHHHHHHHHHHHHHHH-GGG-EEEE---BS-EE
T ss_pred             EEHHHHHHHHHHHHHhcccccccceeEEEecCcccC
Confidence            224778999988887443211112333344444444

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>PLN02778 3,5-epimerase/4-reductase

Probab=99.24  E-value=3.1e-10  Score=103.75  Aligned_cols=144  Identities=15%  Similarity=0.136  Sum_probs=91.3

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCCCc
Q 019722           36 VTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLPL  115 (336)
Q Consensus        36 k~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i  115 (336)
                      +++|||||+|.||.++++.|+++|++|++..                          .|+.+...+...++.     .++
T Consensus        10 ~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~--------------------------~~~~~~~~v~~~l~~-----~~~   58 (298)
T PLN02778         10 LKFLIYGKTGWIGGLLGKLCQEQGIDFHYGS--------------------------GRLENRASLEADIDA-----VKP   58 (298)
T ss_pred             CeEEEECCCCHHHHHHHHHHHhCCCEEEEec--------------------------CccCCHHHHHHHHHh-----cCC
Confidence            6799999999999999999999999987432                          234444545444432     268


Q ss_pred             cEEEEcccCCCCCC-CCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcccc-cc-c
Q 019722          116 NLLINNAGKFAHQH-AISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRY-LG-Q  192 (336)
Q Consensus       116 d~lv~nAg~~~~~~-~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~-~~-~  192 (336)
                      |+|||+||...... +...++..+.+++|+.++..+++++...    +      -+.+++||.. .++.....+. +. .
T Consensus        59 D~ViH~Aa~~~~~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~----g------v~~v~~sS~~-vy~~~~~~p~~~~~~  127 (298)
T PLN02778         59 THVFNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRER----G------LVLTNYATGC-IFEYDDAHPLGSGIG  127 (298)
T ss_pred             CEEEECCcccCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHh----C------CCEEEEecce-EeCCCCCCCcccCCC
Confidence            99999999765321 1223455678999999999999988653    1      2345555532 2111000000 00 0


Q ss_pred             ccCCCCCCChhhHhHHHHHHHHHHHHHHH
Q 019722          193 ISRNKSHYDATRAYALSKLANVLHTKELA  221 (336)
Q Consensus       193 ~~~~~~~~~~~~~Y~~sK~a~~~l~~~la  221 (336)
                      ..+++.+.+....|+.||.+.+.+++..+
T Consensus       128 ~~Ee~~p~~~~s~Yg~sK~~~E~~~~~y~  156 (298)
T PLN02778        128 FKEEDTPNFTGSFYSKTKAMVEELLKNYE  156 (298)
T ss_pred             CCcCCCCCCCCCchHHHHHHHHHHHHHhh
Confidence            11122122333579999999999998765

>PF08643 DUF1776: Fungal family of unknown function (DUF1776); InterPro: IPR013952 This is a fungal protein of unknown function

Probab=99.24  E-value=5.1e-10  Score=100.33  Aligned_cols=183  Identities=20%  Similarity=0.137  Sum_probs=140.5

Q ss_pred             CCEEEEeCC-CChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCC
Q 019722           35 SVTAIITGA-TSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNL  113 (336)
Q Consensus        35 gk~~lItGg-s~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  113 (336)
                      ..+|+|.|. +..|++.+|..|-++|+-|+++..+.+..+....+-     ...+.....|..++.++...++++.+...
T Consensus         3 ~evVvI~Gs~~~PltR~la~DLeRRGFIV~v~~~~~ed~~~ve~e~-----~~dI~~L~ld~~~~~~~~~~l~~f~~~L~   77 (299)
T PF08643_consen    3 KEVVVIAGSPHDPLTRSLALDLERRGFIVYVTVSSAEDEKYVESED-----RPDIRPLWLDDSDPSSIHASLSRFASLLS   77 (299)
T ss_pred             eeEEEEECCCCCccHHHHHHHHhhCCeEEEEEeCCHHHHHHHHhcc-----CCCCCCcccCCCCCcchHHHHHHHHHHhc
Confidence            357889996 799999999999999999999999987665444332     24588888888888888877777766433


Q ss_pred             --------------CccEEEEcccCCCCC---CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEc-
Q 019722          114 --------------PLNLLINNAGKFAHQ---HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVS-  175 (336)
Q Consensus       114 --------------~id~lv~nAg~~~~~---~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vs-  175 (336)
                                    .+..+|.......+.   +.++.+.|.+.++.|+..++.++|.++|+|+.+.   ..+.+||+++ 
T Consensus        78 ~p~~p~~~~~~h~l~L~svi~~Psl~yp~gPie~i~~s~~~~~ln~~ll~~~~~~q~lLPlL~~~~---~~~~~iil~~P  154 (299)
T PF08643_consen   78 RPHVPFPGAPPHHLQLKSVIFIPSLSYPTGPIETISPSSWADELNTRLLTPILTIQGLLPLLRSRS---NQKSKIILFNP  154 (299)
T ss_pred             CCCCCCCCCCCceeEEEEEEEecCCCCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc---CCCceEEEEeC
Confidence                          245555555433222   5788899999999999999999999999998832   0135666665 


Q ss_pred             CCccccccCCcccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCC
Q 019722          176 SSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTR  244 (336)
Q Consensus       176 S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~  244 (336)
                      |..+...                 .+....-.....++.+|+..|++|+.+.+  |.|..+.-|.++-.
T Consensus       155 si~ssl~-----------------~PfhspE~~~~~al~~~~~~LrrEl~~~~--I~V~~i~LG~l~i~  204 (299)
T PF08643_consen  155 SISSSLN-----------------PPFHSPESIVSSALSSFFTSLRRELRPHN--IDVTQIKLGNLDIG  204 (299)
T ss_pred             chhhccC-----------------CCccCHHHHHHHHHHHHHHHHHHHhhhcC--CceEEEEeeeeccc
Confidence            5545544                 44555678888899999999999999877  99999999999755

One of the proteins P32792 from SWISSPROT has been localised to the mitochondria [].

>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]

Probab=99.22  E-value=1.6e-09  Score=94.56  Aligned_cols=259  Identities=11%  Similarity=0.026  Sum_probs=168.8

Q ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhc
Q 019722           32 NLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSL  111 (336)
Q Consensus        32 ~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  111 (336)
                      ...+++++||||+|.||+++|..|..+|..|++.+.-...-.+....+..   ..++..+.-|+..+     ++.     
T Consensus        24 p~~~lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~ftg~k~n~~~~~~---~~~fel~~hdv~~p-----l~~-----   90 (350)
T KOG1429|consen   24 PSQNLRILITGGAGFIGSHLVDKLMTEGHEVIALDNYFTGRKENLEHWIG---HPNFELIRHDVVEP-----LLK-----   90 (350)
T ss_pred             CCCCcEEEEecCcchHHHHHHHHHHhcCCeEEEEecccccchhhcchhcc---CcceeEEEeechhH-----HHH-----
Confidence            35679999999999999999999999999999998765554444443322   34566666677554     443     


Q ss_pred             CCCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcccccc
Q 019722          112 NLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLG  191 (336)
Q Consensus       112 ~~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~  191 (336)
                        .+|.++|.|+...+..  -...--+++-.|+.+....+..+....          .|++..|+ +..++.+...+..+
T Consensus        91 --evD~IyhLAapasp~~--y~~npvktIktN~igtln~lglakrv~----------aR~l~aST-seVYgdp~~hpq~e  155 (350)
T KOG1429|consen   91 --EVDQIYHLAAPASPPH--YKYNPVKTIKTNVIGTLNMLGLAKRVG----------ARFLLAST-SEVYGDPLVHPQVE  155 (350)
T ss_pred             --HhhhhhhhccCCCCcc--cccCccceeeecchhhHHHHHHHHHhC----------ceEEEeec-ccccCCcccCCCcc
Confidence              4788899988766541  112234677889999988877766543          47666655 45666555555555


Q ss_pred             cccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHHH-HHH-H--------
Q 019722          192 QISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLV-FFL-T--------  261 (336)
Q Consensus       192 ~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~-~~~-~--------  261 (336)
                      .+..+..+......|...|...+.|+....++.+     |-|-...+-.+..|.+.-..+...... ... .        
T Consensus       156 ~ywg~vnpigpr~cydegKr~aE~L~~~y~k~~g-----iE~rIaRifNtyGPrm~~~dgrvvsnf~~q~lr~epltv~g  230 (350)
T KOG1429|consen  156 TYWGNVNPIGPRSCYDEGKRVAETLCYAYHKQEG-----IEVRIARIFNTYGPRMHMDDGRVVSNFIAQALRGEPLTVYG  230 (350)
T ss_pred             ccccccCcCCchhhhhHHHHHHHHHHHHhhcccC-----cEEEEEeeecccCCccccCCChhhHHHHHHHhcCCCeEEEc
Confidence            5566666677889999999999999988776643     777777777777776554432111111 111 0        


Q ss_pred             ----HhhcCChHHHHHHHHHHHhcCccccCCceeeccCcccccccCCCCHHHHHHHHHHHHHhhccCCCCCCCCCCCCC
Q 019722          262 ----SKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWTSKLGSNSNEASRLWAASELLVSRDPKSVFDPLSAND  336 (336)
Q Consensus       262 ----~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~p~~~~~  336 (336)
                          ...+.-+.|.+..++.++.++...     -++..+....+        +.++-+.+.++++......|++-.++|
T Consensus       231 ~G~qtRSF~yvsD~Vegll~Lm~s~~~~-----pvNiGnp~e~T--------m~elAemv~~~~~~~s~i~~~~~~~Dd  296 (350)
T KOG1429|consen  231 DGKQTRSFQYVSDLVEGLLRLMESDYRG-----PVNIGNPGEFT--------MLELAEMVKELIGPVSEIEFVENGPDD  296 (350)
T ss_pred             CCcceEEEEeHHHHHHHHHHHhcCCCcC-----CcccCCcccee--------HHHHHHHHHHHcCCCcceeecCCCCCC
Confidence                011223467788888888765532     14444443333        356666677777777776777666554

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=99.22  E-value=7.2e-10  Score=100.56  Aligned_cols=205  Identities=13%  Similarity=0.011  Sum_probs=112.2

Q ss_pred             EEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCCCccE
Q 019722           38 AIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLPLNL  117 (336)
Q Consensus        38 ~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~  117 (336)
                      +|||||+|.||.+++++|+++|++|++++|+........        .  ..  ..|... ..       ..+.+..+|+
T Consensus         1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~--------~--~~--~~~~~~-~~-------~~~~~~~~D~   60 (292)
T TIGR01777         1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTK--------W--EG--YKPWAP-LA-------ESEALEGADA   60 (292)
T ss_pred             CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCccc--------c--ee--eecccc-cc-------hhhhcCCCCE
Confidence            589999999999999999999999999999876432110        0  01  112221 11       1122347999


Q ss_pred             EEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcccccccccCCC
Q 019722          118 LINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNK  197 (336)
Q Consensus       118 lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~~~~~~~  197 (336)
                      |||+||..........+..+..+++|+.+...+++++...    +    ...++++.+|..+.++......+.     ++
T Consensus        61 Vvh~a~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~----~----~~~~~~i~~S~~~~yg~~~~~~~~-----E~  127 (292)
T TIGR01777        61 VINLAGEPIADKRWTEERKQEIRDSRIDTTRALVEAIAAA----E----QKPKVFISASAVGYYGTSEDRVFT-----EE  127 (292)
T ss_pred             EEECCCCCcccccCCHHHHHHHHhcccHHHHHHHHHHHhc----C----CCceEEEEeeeEEEeCCCCCCCcC-----cc
Confidence            9999996543222333455677888999888777777543    1    012334334443444322111111     11


Q ss_pred             CCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHHHHHH-----H----HhhcCCh
Q 019722          198 SHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFL-----T----SKLLKTI  268 (336)
Q Consensus       198 ~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~-----~----~~~~~~~  268 (336)
                      ........|+..+...+...+.    +...+  +.+..+.|+.+..+-......... .....     .    .......
T Consensus       128 ~~~~~~~~~~~~~~~~e~~~~~----~~~~~--~~~~ilR~~~v~G~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~i~v  200 (292)
T TIGR01777       128 DSPAGDDFLAELCRDWEEAAQA----AEDLG--TRVVLLRTGIVLGPKGGALAKMLP-PFRLGLGGPLGSGRQWFSWIHI  200 (292)
T ss_pred             cCCCCCChHHHHHHHHHHHhhh----chhcC--CceEEEeeeeEECCCcchhHHHHH-HHhcCcccccCCCCcccccEeH
Confidence            1011122244444444433332    22234  999999999998874211111110 01100     0    0122456


Q ss_pred             HHHHHHHHHHHhcC
Q 019722          269 PQGAATTCYVAIHP  282 (336)
Q Consensus       269 ~~~a~~~~~l~~~~  282 (336)
                      +|++..++.++..+
T Consensus       201 ~Dva~~i~~~l~~~  214 (292)
T TIGR01777       201 EDLVQLILFALENA  214 (292)
T ss_pred             HHHHHHHHHHhcCc
Confidence            88899999888644

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>PLN02503 fatty acyl-CoA reductase 2

Probab=99.21  E-value=5.7e-10  Score=110.07  Aligned_cols=193  Identities=15%  Similarity=0.161  Sum_probs=124.4

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCC---EEEEeeCChH--HHHHHH-H---------HHHhhCC-------CCceEE
Q 019722           33 LSSVTAIITGATSGIGAETARVLAKRGA---RLVLPARSLK--AAEEAK-A---------RLASDCP-------GSDIVV   90 (336)
Q Consensus        33 l~gk~~lItGgs~gIG~aia~~L~~~G~---~V~~~~r~~~--~~~~~~-~---------~l~~~~~-------~~~~~~   90 (336)
                      ++||+++||||||.||..++++|++.+.   +|+++.|...  .+.+.. +         .+++..+       ..++++
T Consensus       117 ~~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~~  196 (605)
T PLN02503        117 LRGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLVP  196 (605)
T ss_pred             hcCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEEE
Confidence            5899999999999999999999998763   6888888542  122111 1         2222222       247999


Q ss_pred             EeccCCCHH------HHHHHHHHHHhcCCCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhcc
Q 019722           91 LPLDLSSLS------SVRNFVSQFHSLNLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKA  164 (336)
Q Consensus        91 ~~~Dl~~~~------~v~~~~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~  164 (336)
                      +.+|++++.      ..+.+.+       .+|++||+|+....     .+..+..+++|+.++..+++.+...-.     
T Consensus       197 v~GDl~d~~LGLs~~~~~~L~~-------~vDiVIH~AA~v~f-----~~~~~~a~~vNV~GT~nLLelA~~~~~-----  259 (605)
T PLN02503        197 VVGNVCESNLGLEPDLADEIAK-------EVDVIINSAANTTF-----DERYDVAIDINTRGPCHLMSFAKKCKK-----  259 (605)
T ss_pred             EEeeCCCcccCCCHHHHHHHHh-------cCCEEEECcccccc-----ccCHHHHHHHHHHHHHHHHHHHHHcCC-----
Confidence            999999873      3333322       58999999997642     145778899999999999988765310     


Q ss_pred             CCCCCeEEEEcCCccccc---cCCccccc----------------------ccc---------cC---C-----------
Q 019722          165 TGIQGRIVNVSSSIHSWF---SGDMIRYL----------------------GQI---------SR---N-----------  196 (336)
Q Consensus       165 ~~~~grIV~vsS~~~~~~---~~~~~~~~----------------------~~~---------~~---~-----------  196 (336)
                         -.++|++||....-.   ...+..|.                      +..         ..   .           
T Consensus       260 ---lk~fV~vSTayVyG~~~G~i~E~~y~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~d~~~~~~~~~~~~~~l~~~  336 (605)
T PLN02503        260 ---LKLFLQVSTAYVNGQRQGRIMEKPFRMGDCIARELGISNSLPHNRPALDIEAEIKLALDSKRHGFQSNSFAQKMKDL  336 (605)
T ss_pred             ---CCeEEEccCceeecCCCCeeeeeecCcccccccccccccccccccccCCHHHHHHHHHHhhhcccchHHHHHHhhhc
Confidence               147888888542211   11111221                      000         00   0           


Q ss_pred             ----CCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchh
Q 019722          197 ----KSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGF  252 (336)
Q Consensus       197 ----~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~  252 (336)
                          ....+....|.-+|+..|.+++..+     .+  +.+..+.|..|.+.+....+++
T Consensus       337 g~~~~~~~~~pNtYt~TK~lAE~lV~~~~-----~~--LPv~IvRPsiV~st~~eP~pGw  389 (605)
T PLN02503        337 GLERAKLYGWQDTYVFTKAMGEMVINSMR-----GD--IPVVIIRPSVIESTWKDPFPGW  389 (605)
T ss_pred             ccchhhhCCCCChHHHHHHHHHHHHHHhc-----CC--CCEEEEcCCEecccccCCcccc
Confidence                0012223469999999999887433     13  9999999999976655555443

>PRK05865 hypothetical protein; Provisional

Probab=99.20  E-value=4e-10  Score=114.75  Aligned_cols=164  Identities=17%  Similarity=0.127  Sum_probs=115.5

Q ss_pred             EEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCCCcc
Q 019722           37 TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLPLN  116 (336)
Q Consensus        37 ~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id  116 (336)
                      +++||||+|.||++++++|+++|++|++++|+....      +     ..++.++.+|+++.+++..+++       .+|
T Consensus         2 kILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~~------~-----~~~v~~v~gDL~D~~~l~~al~-------~vD   63 (854)
T PRK05865          2 RIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPDS------W-----PSSADFIAADIRDATAVESAMT-------GAD   63 (854)
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCchhh------c-----ccCceEEEeeCCCHHHHHHHHh-------CCC
Confidence            699999999999999999999999999999975321      1     2357889999999999888775       589


Q ss_pred             EEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcccccccccCC
Q 019722          117 LLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRN  196 (336)
Q Consensus       117 ~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~~~~~~  196 (336)
                      ++||+|+....           .+++|+.++..+++++.    +.+     .+++|++||.                   
T Consensus        64 ~VVHlAa~~~~-----------~~~vNv~GT~nLLeAa~----~~g-----vkr~V~iSS~-------------------  104 (854)
T PRK05865         64 VVAHCAWVRGR-----------NDHINIDGTANVLKAMA----ETG-----TGRIVFTSSG-------------------  104 (854)
T ss_pred             EEEECCCcccc-----------hHHHHHHHHHHHHHHHH----HcC-----CCeEEEECCc-------------------
Confidence            99999985321           46789999887766543    322     3699999984                   


Q ss_pred             CCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHHHHH--HHH------hhcCCh
Q 019722          197 KSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFF--LTS------KLLKTI  268 (336)
Q Consensus       197 ~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~--~~~------~~~~~~  268 (336)
                         .         |.+.+.+++    +   .+  +.+..+.|+.+..+....   +.......  ...      ......
T Consensus       105 ---~---------K~aaE~ll~----~---~g--l~~vILRp~~VYGP~~~~---~i~~ll~~~v~~~G~~~~~~dfIhV  160 (854)
T PRK05865        105 ---H---------QPRVEQMLA----D---CG--LEWVAVRCALIFGRNVDN---WVQRLFALPVLPAGYADRVVQVVHS  160 (854)
T ss_pred             ---H---------HHHHHHHHH----H---cC--CCEEEEEeceEeCCChHH---HHHHHhcCceeccCCCCceEeeeeH
Confidence               1         666665553    1   24  899999999998874211   11111100  000      012446


Q ss_pred             HHHHHHHHHHHhc
Q 019722          269 PQGAATTCYVAIH  281 (336)
Q Consensus       269 ~~~a~~~~~l~~~  281 (336)
                      +|++.+++.++..
T Consensus       161 dDVA~Ai~~aL~~  173 (854)
T PRK05865        161 DDAQRLLVRALLD  173 (854)
T ss_pred             HHHHHHHHHHHhC
Confidence            8888888888753

>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

Probab=99.19  E-value=6.6e-10  Score=98.80  Aligned_cols=186  Identities=18%  Similarity=0.174  Sum_probs=130.6

Q ss_pred             EEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCCCccE
Q 019722           38 AIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLPLNL  117 (336)
Q Consensus        38 ~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~  117 (336)
                      +||||++|-+|.++++.|. .+++|+.++|..                       +|++|++.+.+++++.     ++|+
T Consensus         3 iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~~~-----------------------~Ditd~~~v~~~i~~~-----~PDv   53 (281)
T COG1091           3 ILITGANGQLGTELRRALP-GEFEVIATDRAE-----------------------LDITDPDAVLEVIRET-----RPDV   53 (281)
T ss_pred             EEEEcCCChHHHHHHHHhC-CCceEEeccCcc-----------------------ccccChHHHHHHHHhh-----CCCE
Confidence            8999999999999999999 668999988874                       7999999999999876     7999


Q ss_pred             EEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcccccccccCCC
Q 019722          118 LINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNK  197 (336)
Q Consensus       118 lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~~~~~~~  197 (336)
                      +||+|++..-.  ..+.+-+..+.+|..++..+.+++...          +.++|++|+-.-.-+...     .++.+++
T Consensus        54 VIn~AAyt~vD--~aE~~~e~A~~vNa~~~~~lA~aa~~~----------ga~lVhiSTDyVFDG~~~-----~~Y~E~D  116 (281)
T COG1091          54 VINAAAYTAVD--KAESEPELAFAVNATGAENLARAAAEV----------GARLVHISTDYVFDGEKG-----GPYKETD  116 (281)
T ss_pred             EEECccccccc--cccCCHHHHHHhHHHHHHHHHHHHHHh----------CCeEEEeecceEecCCCC-----CCCCCCC
Confidence            99999975432  244556789999999999999988775          479999998654332110     1122222


Q ss_pred             CCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHHHHHHHH--------hhc---C
Q 019722          198 SHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTS--------KLL---K  266 (336)
Q Consensus       198 ~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~--------~~~---~  266 (336)
                      . ..+...|+.||.+.|..++...         -+...|...++........   ...+.+....        ...   .
T Consensus       117 ~-~~P~nvYG~sKl~GE~~v~~~~---------~~~~I~Rtswv~g~~g~nF---v~tml~la~~~~~l~vv~Dq~gsPt  183 (281)
T COG1091         117 T-PNPLNVYGRSKLAGEEAVRAAG---------PRHLILRTSWVYGEYGNNF---VKTMLRLAKEGKELKVVDDQYGSPT  183 (281)
T ss_pred             C-CCChhhhhHHHHHHHHHHHHhC---------CCEEEEEeeeeecCCCCCH---HHHHHHHhhcCCceEEECCeeeCCc
Confidence            2 3345589999999999888754         2344556666666654332   2112211111        111   2


Q ss_pred             ChHHHHHHHHHHHhcC
Q 019722          267 TIPQGAATTCYVAIHP  282 (336)
Q Consensus       267 ~~~~~a~~~~~l~~~~  282 (336)
                      ...+.|..+..++...
T Consensus       184 ~~~dlA~~i~~ll~~~  199 (281)
T COG1091         184 YTEDLADAILELLEKE  199 (281)
T ss_pred             cHHHHHHHHHHHHhcc
Confidence            3477888888888643

>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=99.19  E-value=4.9e-10  Score=102.15  Aligned_cols=184  Identities=18%  Similarity=0.166  Sum_probs=122.7

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHCC-CEEEEeeCChH---HHHHHHHHHH-----hhCCCCceEEEeccCCCH------HH
Q 019722           36 VTAIITGATSGIGAETARVLAKRG-ARLVLPARSLK---AAEEAKARLA-----SDCPGSDIVVLPLDLSSL------SS  100 (336)
Q Consensus        36 k~~lItGgs~gIG~aia~~L~~~G-~~V~~~~r~~~---~~~~~~~~l~-----~~~~~~~~~~~~~Dl~~~------~~  100 (336)
                      +++++|||||.+|..++.+|+.+- ++|+...|-.+   ...++.+.+.     .+....++.++..|++.+      ..
T Consensus         1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~~   80 (382)
T COG3320           1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSERT   80 (382)
T ss_pred             CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHHH
Confidence            579999999999999999999876 48998887543   2233333333     112257999999999954      33


Q ss_pred             HHHHHHHHHhcCCCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccc
Q 019722          101 VRNFVSQFHSLNLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHS  180 (336)
Q Consensus       101 v~~~~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~  180 (336)
                      .+.+.+       .+|.+|||++..+..     ..+.+....|+.|+..+++.+.-.-         ...+.+|||.+..
T Consensus        81 ~~~La~-------~vD~I~H~gA~Vn~v-----~pYs~L~~~NVlGT~evlrLa~~gk---------~Kp~~yVSsisv~  139 (382)
T COG3320          81 WQELAE-------NVDLIIHNAALVNHV-----FPYSELRGANVLGTAEVLRLAATGK---------PKPLHYVSSISVG  139 (382)
T ss_pred             HHHHhh-------hcceEEecchhhccc-----CcHHHhcCcchHhHHHHHHHHhcCC---------CceeEEEeeeeec
Confidence            344433       589999999976432     4466788889999999888765421         2358999997543


Q ss_pred             ccc-CCcc--cccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCC
Q 019722          181 WFS-GDMI--RYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLT  246 (336)
Q Consensus       181 ~~~-~~~~--~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~  246 (336)
                      ... ++.+  ++++..............|+.||.+.|-+++.....    |  +++..+.||++-.+..
T Consensus       140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~~SKwvaE~Lvr~A~~r----G--Lpv~I~Rpg~I~gds~  202 (382)
T COG3320         140 ETEYYSNFTVDFDEISPTRNVGQGLAGGYGRSKWVAEKLVREAGDR----G--LPVTIFRPGYITGDSR  202 (382)
T ss_pred             cccccCCCccccccccccccccCccCCCcchhHHHHHHHHHHHhhc----C--CCeEEEecCeeeccCc
Confidence            221 1111  111000111123344567999999999888876543    5  9999999999965544

>PRK08309 short chain dehydrogenase; Provisional

Probab=99.18  E-value=2.3e-09  Score=90.13  Aligned_cols=173  Identities=17%  Similarity=0.100  Sum_probs=120.1

Q ss_pred             EEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCCCcc
Q 019722           37 TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLPLN  116 (336)
Q Consensus        37 ~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id  116 (336)
                      +++||||+ |+|.++++.|+++|++|++++|+++..+.....+..   ..++.++++|++|++++.++++.+.+.++++|
T Consensus         2 ~vlVtGGt-G~gg~la~~L~~~G~~V~v~~R~~~~~~~l~~~l~~---~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~id   77 (177)
T PRK08309          2 HALVIGGT-GMLKRVSLWLCEKGFHVSVIARREVKLENVKRESTT---PESITPLPLDYHDDDALKLAIKSTIEKNGPFD   77 (177)
T ss_pred             EEEEECcC-HHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHhhc---CCcEEEEEccCCCHHHHHHHHHHHHHHcCCCe
Confidence            68999998 777889999999999999999998877666554432   35789999999999999999999988889999


Q ss_pred             EEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcccccccccCC
Q 019722          117 LLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRN  196 (336)
Q Consensus       117 ~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~~~~~~  196 (336)
                      ++|+..-..                    ++-.+.+++...-.+.+     +.+++.+-.+.+..+              
T Consensus        78 ~lv~~vh~~--------------------~~~~~~~~~~~~gv~~~-----~~~~~h~~gs~~~~~--------------  118 (177)
T PRK08309         78 LAVAWIHSS--------------------AKDALSVVCRELDGSSE-----TYRLFHVLGSAASDP--------------  118 (177)
T ss_pred             EEEEecccc--------------------chhhHHHHHHHHccCCC-----CceEEEEeCCcCCch--------------
Confidence            999777542                    12223333333322221     347888865432100              


Q ss_pred             CCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHHHHHHHHhhcCChHHHHHHHH
Q 019722          197 KSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSKLLKTIPQGAATTC  276 (336)
Q Consensus       197 ~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~  276 (336)
                                           +..+..+....  +...-|.-|++..+-...                --+-+|+++.++
T Consensus       119 ---------------------~~~~~~~~~~~--~~~~~i~lgf~~~~~~~r----------------wlt~~ei~~gv~  159 (177)
T PRK08309        119 ---------------------RIPSEKIGPAR--CSYRRVILGFVLEDTYSR----------------WLTHEEISDGVI  159 (177)
T ss_pred             ---------------------hhhhhhhhhcC--CceEEEEEeEEEeCCccc----------------cCchHHHHHHHH
Confidence                                 11112233333  678888899997664333                235688999999


Q ss_pred             HHHhcCccccCCcee
Q 019722          277 YVAIHPRLVNVSGKY  291 (336)
Q Consensus       277 ~l~~~~~~~~~~G~~  291 (336)
                      ..+.++....+.|+.
T Consensus       160 ~~~~~~~~~~~~g~~  174 (177)
T PRK08309        160 KAIESDADEHVVGTV  174 (177)
T ss_pred             HHHhcCCCeEEEEEe
Confidence            998877776666653

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=99.15  E-value=7.5e-10  Score=100.45  Aligned_cols=210  Identities=14%  Similarity=0.037  Sum_probs=124.3

Q ss_pred             EEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCCC-c
Q 019722           37 TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLP-L  115 (336)
Q Consensus        37 ~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~-i  115 (336)
                      +++||||||.||++++++|+++|++|.++.|++++..           ...+..+.+|+.|++++..+++.. +...+ +
T Consensus         1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~-----------~~~~~~~~~d~~d~~~l~~a~~~~-~~~~g~~   68 (285)
T TIGR03649         1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSA-----------GPNEKHVKFDWLDEDTWDNPFSSD-DGMEPEI   68 (285)
T ss_pred             CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCcccc-----------CCCCccccccCCCHHHHHHHHhcc-cCcCCce
Confidence            3799999999999999999999999999999977431           124666789999999999988653 33345 8


Q ss_pred             cEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcccccccccC
Q 019722          116 NLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISR  195 (336)
Q Consensus       116 d~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~~~~~  195 (336)
                      |.++++++...       +..+            ..+.++...++.+     -.++|++||......             
T Consensus        69 d~v~~~~~~~~-------~~~~------------~~~~~i~aa~~~g-----v~~~V~~Ss~~~~~~-------------  111 (285)
T TIGR03649        69 SAVYLVAPPIP-------DLAP------------PMIKFIDFARSKG-----VRRFVLLSASIIEKG-------------  111 (285)
T ss_pred             eEEEEeCCCCC-------ChhH------------HHHHHHHHHHHcC-----CCEEEEeeccccCCC-------------
Confidence            99999887421       1111            1123444444443     258999998543221             


Q ss_pred             CCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccc-hhHHH---HHHH--HHHhhcCChH
Q 019722          196 NKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRERE-GFITD---LVFF--LTSKLLKTIP  269 (336)
Q Consensus       196 ~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~-~~~~~---~~~~--~~~~~~~~~~  269 (336)
                          .+       .+...+.+.+.    .  .+  +....+.|+++..++..... .....   ....  -.......++
T Consensus       112 ----~~-------~~~~~~~~l~~----~--~g--i~~tilRp~~f~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~  172 (285)
T TIGR03649       112 ----GP-------AMGQVHAHLDS----L--GG--VEYTVLRPTWFMENFSEEFHVEAIRKENKIYSATGDGKIPFVSAD  172 (285)
T ss_pred             ----Cc-------hHHHHHHHHHh----c--cC--CCEEEEeccHHhhhhcccccccccccCCeEEecCCCCccCcccHH
Confidence                11       11111211111    1  24  89999999987655422100 00000   0000  0112245678


Q ss_pred             HHHHHHHHHHhcCccccCCceeeccCcccccccCCCCHHHHHHHHHHHHHhhccCC
Q 019722          270 QGAATTCYVAIHPRLVNVSGKYFADCNEAWTSKLGSNSNEASRLWAASELLVSRDP  325 (336)
Q Consensus       270 ~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~  325 (336)
                      |++..+..++..+..   .|..+...|....+-        +++.+.+.+++|++.
T Consensus       173 Dva~~~~~~l~~~~~---~~~~~~l~g~~~~s~--------~eia~~l~~~~g~~v  217 (285)
T TIGR03649       173 DIARVAYRALTDKVA---PNTDYVVLGPELLTY--------DDVAEILSRVLGRKI  217 (285)
T ss_pred             HHHHHHHHHhcCCCc---CCCeEEeeCCccCCH--------HHHHHHHHHHhCCce
Confidence            999999988875432   244444455444442        566666666666643

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase

Probab=99.10  E-value=2.3e-08  Score=109.44  Aligned_cols=226  Identities=17%  Similarity=0.082  Sum_probs=134.5

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCC----CEEEEeeCChHHHH---HHHHHHHhhC-----CCCceEEEeccCCCHHHH
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRG----ARLVLPARSLKAAE---EAKARLASDC-----PGSDIVVLPLDLSSLSSV  101 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G----~~V~~~~r~~~~~~---~~~~~l~~~~-----~~~~~~~~~~Dl~~~~~v  101 (336)
                      ..++++||||+|.||.+++.+|++++    .+|+...|+.....   ...+.+....     ...++.++.+|++++.--
T Consensus       970 ~~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lg 1049 (1389)
T TIGR03443       970 TPITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFG 1049 (1389)
T ss_pred             CCceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCC
Confidence            35899999999999999999999987    68888888754322   2222111110     013799999999865210


Q ss_pred             --HHHHHHHHhcCCCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCcc
Q 019722          102 --RNFVSQFHSLNLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIH  179 (336)
Q Consensus       102 --~~~~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~  179 (336)
                        ....+++.   ..+|++||||+.....     ..+......|+.|+..+++.+...    +     ..+++++||.+.
T Consensus      1050 l~~~~~~~l~---~~~d~iiH~Aa~~~~~-----~~~~~~~~~nv~gt~~ll~~a~~~----~-----~~~~v~vSS~~v 1112 (1389)
T TIGR03443      1050 LSDEKWSDLT---NEVDVIIHNGALVHWV-----YPYSKLRDANVIGTINVLNLCAEG----K-----AKQFSFVSSTSA 1112 (1389)
T ss_pred             cCHHHHHHHH---hcCCEEEECCcEecCc-----cCHHHHHHhHHHHHHHHHHHHHhC----C-----CceEEEEeCeee
Confidence              11222222   2689999999975421     234455668999999998876432    1     258999999754


Q ss_pred             ccccCCc-----------ccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCc
Q 019722          180 SWFSGDM-----------IRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRE  248 (336)
Q Consensus       180 ~~~~~~~-----------~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~  248 (336)
                      .......           ...................|+.||.+.+.+++..+.    .|  +.+..+.||.|.++....
T Consensus      1113 ~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~~~----~g--~~~~i~Rpg~v~G~~~~g 1186 (1389)
T TIGR03443      1113 LDTEYYVNLSDELVQAGGAGIPESDDLMGSSKGLGTGYGQSKWVAEYIIREAGK----RG--LRGCIVRPGYVTGDSKTG 1186 (1389)
T ss_pred             cCcccccchhhhhhhccCCCCCcccccccccccCCCChHHHHHHHHHHHHHHHh----CC--CCEEEECCCccccCCCcC
Confidence            3110000           000000000000111234699999999998887543    25  999999999998764332


Q ss_pred             c---chhHHHHHHHHHH----------hhcCChHHHHHHHHHHHhcC
Q 019722          249 R---EGFITDLVFFLTS----------KLLKTIPQGAATTCYVAIHP  282 (336)
Q Consensus       249 ~---~~~~~~~~~~~~~----------~~~~~~~~~a~~~~~l~~~~  282 (336)
                      .   .............          ......++++.+++.++..+
T Consensus      1187 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~Vddva~ai~~~~~~~ 1233 (1389)
T TIGR03443      1187 ATNTDDFLLRMLKGCIQLGLIPNINNTVNMVPVDHVARVVVAAALNP 1233 (1389)
T ss_pred             CCCchhHHHHHHHHHHHhCCcCCCCCccccccHHHHHHHHHHHHhCC
Confidence            2   1222222221111          11234677888888887644

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.

>PLN00016 RNA-binding protein; Provisional

Probab=99.09  E-value=1.7e-08  Score=95.41  Aligned_cols=224  Identities=15%  Similarity=0.119  Sum_probs=129.3

Q ss_pred             CCCCCCEEEEe----CCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHH-------HHHHhhCCCCceEEEeccCCCHH
Q 019722           31 PNLSSVTAIIT----GATSGIGAETARVLAKRGARLVLPARSLKAAEEAK-------ARLASDCPGSDIVVLPLDLSSLS   99 (336)
Q Consensus        31 ~~l~gk~~lIt----Ggs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~-------~~l~~~~~~~~~~~~~~Dl~~~~   99 (336)
                      .....+++|||    ||+|.||.+++++|+++|++|+++.|+........       .++.    ...+.++.+|+.+  
T Consensus        48 ~~~~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~----~~~v~~v~~D~~d--  121 (378)
T PLN00016         48 AAVEKKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELS----SAGVKTVWGDPAD--  121 (378)
T ss_pred             cccccceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhh----hcCceEEEecHHH--
Confidence            33455789999    99999999999999999999999999876432211       1111    2347888999866  


Q ss_pred             HHHHHHHHHHhcCCCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCcc
Q 019722          100 SVRNFVSQFHSLNLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIH  179 (336)
Q Consensus       100 ~v~~~~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~  179 (336)
                       +..++.     ..++|+||++++.       .   .        .+    ++.++..+++.+     -.++|++||.. 
T Consensus       122 -~~~~~~-----~~~~d~Vi~~~~~-------~---~--------~~----~~~ll~aa~~~g-----vkr~V~~SS~~-  167 (378)
T PLN00016        122 -VKSKVA-----GAGFDVVYDNNGK-------D---L--------DE----VEPVADWAKSPG-----LKQFLFCSSAG-  167 (378)
T ss_pred             -HHhhhc-----cCCccEEEeCCCC-------C---H--------HH----HHHHHHHHHHcC-----CCEEEEEccHh-
Confidence             333221     2368999998762       1   1        11    222333333332     25899999964 


Q ss_pred             ccccCCcccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHHHHH
Q 019722          180 SWFSGDMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFF  259 (336)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~  259 (336)
                      .++.....+..     +......   +. +|...+.+.+       ..+  +.+..+.|+.+..+.....  ....+...
T Consensus       168 vyg~~~~~p~~-----E~~~~~p---~~-sK~~~E~~l~-------~~~--l~~~ilRp~~vyG~~~~~~--~~~~~~~~  227 (378)
T PLN00016        168 VYKKSDEPPHV-----EGDAVKP---KA-GHLEVEAYLQ-------KLG--VNWTSFRPQYIYGPGNNKD--CEEWFFDR  227 (378)
T ss_pred             hcCCCCCCCCC-----CCCcCCC---cc-hHHHHHHHHH-------HcC--CCeEEEeceeEECCCCCCc--hHHHHHHH
Confidence            33321111111     1111111   11 7887776543       124  8999999999998754321  11111111


Q ss_pred             HHH-------------hhcCChHHHHHHHHHHHhcCccccCCceeeccCcccccccCCCCHHHHHHHHHHHHHhhccCC
Q 019722          260 LTS-------------KLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWTSKLGSNSNEASRLWAASELLVSRDP  325 (336)
Q Consensus       260 ~~~-------------~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~  325 (336)
                      +..             ......+|.+.+++.++..+..   .|+.|+..+....+-        .++.+.+.+.++...
T Consensus       228 ~~~~~~i~~~g~g~~~~~~i~v~Dva~ai~~~l~~~~~---~~~~yni~~~~~~s~--------~el~~~i~~~~g~~~  295 (378)
T PLN00016        228 LVRGRPVPIPGSGIQLTQLGHVKDLASMFALVVGNPKA---AGQIFNIVSDRAVTF--------DGMAKACAKAAGFPE  295 (378)
T ss_pred             HHcCCceeecCCCCeeeceecHHHHHHHHHHHhcCccc---cCCEEEecCCCccCH--------HHHHHHHHHHhCCCC
Confidence            110             0123468889999888875432   466676666544442        455555555555543

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.09  E-value=5.9e-09  Score=105.76  Aligned_cols=159  Identities=15%  Similarity=0.056  Sum_probs=102.7

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCC
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNL  113 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  113 (336)
                      ..+++|||||+|.||+++++.|.++|++|.+                          ...|++|...+..+++..     
T Consensus       379 ~~mkiLVtGa~G~iG~~l~~~L~~~g~~v~~--------------------------~~~~l~d~~~v~~~i~~~-----  427 (668)
T PLN02260        379 PSLKFLIYGRTGWIGGLLGKLCEKQGIAYEY--------------------------GKGRLEDRSSLLADIRNV-----  427 (668)
T ss_pred             CCceEEEECCCchHHHHHHHHHHhCCCeEEe--------------------------eccccccHHHHHHHHHhh-----
Confidence            3357999999999999999999999988731                          113577888777766543     


Q ss_pred             CccEEEEcccCCCCC-CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcccc-cc
Q 019722          114 PLNLLINNAGKFAHQ-HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRY-LG  191 (336)
Q Consensus       114 ~id~lv~nAg~~~~~-~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~-~~  191 (336)
                      ++|+|||+|+..... .+...++.++.+++|+.++..+++++...          +.+.|++||....-.......- ..
T Consensus       428 ~pd~Vih~Aa~~~~~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~----------g~~~v~~Ss~~v~~~~~~~~~~~~~  497 (668)
T PLN02260        428 KPTHVFNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCREN----------GLLMMNFATGCIFEYDAKHPEGSGI  497 (668)
T ss_pred             CCCEEEECCcccCCCCCChHHhCHHHHHHHHhHHHHHHHHHHHHc----------CCeEEEEcccceecCCcccccccCC
Confidence            689999999976432 22334556788999999999999998753          1356667664321110000000 00


Q ss_pred             cccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeC
Q 019722          192 QISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHP  238 (336)
Q Consensus       192 ~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~P  238 (336)
                      ...+++...+....|+.||.+.+.+++.....+   .  +|+..+..
T Consensus       498 p~~E~~~~~~~~~~Yg~sK~~~E~~~~~~~~~~---~--~r~~~~~~  539 (668)
T PLN02260        498 GFKEEDKPNFTGSFYSKTKAMVEELLREYDNVC---T--LRVRMPIS  539 (668)
T ss_pred             CCCcCCCCCCCCChhhHHHHHHHHHHHhhhhhe---E--EEEEEecc
Confidence            111222223334579999999999998764321   2  66666653

>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]

Probab=99.06  E-value=1.1e-08  Score=82.25  Aligned_cols=180  Identities=13%  Similarity=0.099  Sum_probs=129.5

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcC-
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLN-  112 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~-  112 (336)
                      +-..++|-||-+.+|.+++..|-.+++-|.-++-.+..-            -..-+.+..|-+=.++-+.+.+++.+.. 
T Consensus         2 sagrVivYGGkGALGSacv~~FkannywV~siDl~eNe~------------Ad~sI~V~~~~swtEQe~~v~~~vg~sL~   69 (236)
T KOG4022|consen    2 SAGRVIVYGGKGALGSACVEFFKANNYWVLSIDLSENEQ------------ADSSILVDGNKSWTEQEQSVLEQVGSSLQ   69 (236)
T ss_pred             CCceEEEEcCcchHhHHHHHHHHhcCeEEEEEeeccccc------------ccceEEecCCcchhHHHHHHHHHHHHhhc
Confidence            446789999999999999999999999888887654310            1123344455544566667777766543 


Q ss_pred             -CCccEEEEcccCCCCCCCC---CchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccc
Q 019722          113 -LPLNLLINNAGKFAHQHAI---SEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIR  188 (336)
Q Consensus       113 -~~id~lv~nAg~~~~~~~~---~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~  188 (336)
                       .++|.+++.||-+.....-   -..+.+-++.-.++....-.+.+..+|+.       +|-+-..+..++.-+      
T Consensus        70 gekvDav~CVAGGWAGGnAksKdl~KNaDLMwKQSvwtSaIsa~lAt~HLK~-------GGLL~LtGAkaAl~g------  136 (236)
T KOG4022|consen   70 GEKVDAVFCVAGGWAGGNAKSKDLVKNADLMWKQSVWTSAISAKLATTHLKP-------GGLLQLTGAKAALGG------  136 (236)
T ss_pred             ccccceEEEeeccccCCCcchhhhhhchhhHHHHHHHHHHHHHHHHHhccCC-------CceeeecccccccCC------
Confidence             3699999999966544211   12345567777777777777777777754       244444444433333      


Q ss_pred             ccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCcc
Q 019722          189 YLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRER  249 (336)
Q Consensus       189 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~  249 (336)
                                 .|++..|+.+|++++.++++++.+-....++--+.+|.|=..+|||.+..
T Consensus       137 -----------TPgMIGYGMAKaAVHqLt~SLaak~SGlP~gsaa~~ilPVTLDTPMNRKw  186 (236)
T KOG4022|consen  137 -----------TPGMIGYGMAKAAVHQLTSSLAAKDSGLPDGSAALTILPVTLDTPMNRKW  186 (236)
T ss_pred             -----------CCcccchhHHHHHHHHHHHHhcccccCCCCCceeEEEeeeeccCcccccc
Confidence                       78888999999999999999998866554568999999999999998874

>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.05  E-value=8.6e-10  Score=96.30  Aligned_cols=186  Identities=17%  Similarity=0.135  Sum_probs=132.9

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhh--CCCCceEEEeccCCCHHHHHHHHHHHHhcC
Q 019722           35 SVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASD--CPGSDIVVLPLDLSSLSSVRNFVSQFHSLN  112 (336)
Q Consensus        35 gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  112 (336)
                      +|+|||||-||--|..+++.|+++|+.|+-+.|..+......-.|...  ..+.+++.+.+|++|...+.++++++    
T Consensus         2 ~K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v----   77 (345)
T COG1089           2 GKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEV----   77 (345)
T ss_pred             CceEEEecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHHHHHHhc----
Confidence            699999999999999999999999999999987744322111011111  12456999999999999999999877    


Q ss_pred             CCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccccccc
Q 019722          113 LPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQ  192 (336)
Q Consensus       113 ~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~~  192 (336)
                       .+|-+.|.|+-.+-  ..+.+..+.+.+++..|+..++.+..-+-.+       +-|+..-||+ -.++..     ...
T Consensus        78 -~PdEIYNLaAQS~V--~vSFe~P~~T~~~~~iGtlrlLEaiR~~~~~-------~~rfYQAStS-E~fG~v-----~~~  141 (345)
T COG1089          78 -QPDEIYNLAAQSHV--GVSFEQPEYTADVDAIGTLRLLEAIRILGEK-------KTRFYQASTS-ELYGLV-----QEI  141 (345)
T ss_pred             -Cchhheeccccccc--cccccCcceeeeechhHHHHHHHHHHHhCCc-------ccEEEecccH-HhhcCc-----ccC
Confidence             68888888874332  2355666778899999999998887655421       2355555543 333321     123


Q ss_pred             ccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCC-cEEEEEeeCCc
Q 019722          193 ISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEA-NVTVNCVHPGI  240 (336)
Q Consensus       193 ~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~-~I~vn~v~PG~  240 (336)
                      +..+..++.+..+|+++|.....++...+..+.-... +|-+|.=+|.-
T Consensus       142 pq~E~TPFyPrSPYAvAKlYa~W~tvNYResYgl~AcnGILFNHESP~R  190 (345)
T COG1089         142 PQKETTPFYPRSPYAVAKLYAYWITVNYRESYGLFACNGILFNHESPLR  190 (345)
T ss_pred             ccccCCCCCCCCHHHHHHHHHHheeeehHhhcCceeecceeecCCCCCC
Confidence            3445566888999999999999999998887765321 48888777753

>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal

Probab=99.04  E-value=6.7e-10  Score=97.21  Aligned_cols=100  Identities=14%  Similarity=0.193  Sum_probs=73.7

Q ss_pred             CEEEEeCC-CChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCCC
Q 019722           36 VTAIITGA-TSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLP  114 (336)
Q Consensus        36 k~~lItGg-s~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  114 (336)
                      .+-.||.. +||||+++|++|+++|++|+++++...        +...  .    ...+|+++.+++..+++.+.+.+++
T Consensus        15 ~VR~itN~SSGgIG~AIA~~la~~Ga~Vvlv~~~~~--------l~~~--~----~~~~Dv~d~~s~~~l~~~v~~~~g~   80 (227)
T TIGR02114        15 SVRSITNHSTGHLGKIITETFLSAGHEVTLVTTKRA--------LKPE--P----HPNLSIREIETTKDLLITLKELVQE   80 (227)
T ss_pred             CceeecCCcccHHHHHHHHHHHHCCCEEEEEcChhh--------cccc--c----CCcceeecHHHHHHHHHHHHHHcCC
Confidence            34455555 579999999999999999999886311        1100  1    2458999999999999999988999


Q ss_pred             ccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHH
Q 019722          115 LNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTK  152 (336)
Q Consensus       115 id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~  152 (336)
                      +|++|||||+....  .+.+.++|++++   ..+.|.+.+
T Consensus        81 iDiLVnnAgv~d~~~~~~~s~e~~~~~~---~~~~~~~~~  117 (227)
T TIGR02114        81 HDILIHSMAVSDYTPVYMTDLEQVQASD---NLNEFLSKQ  117 (227)
T ss_pred             CCEEEECCEeccccchhhCCHHHHhhhc---chhhhhccc
Confidence            99999999975432  556777777664   445555554

In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.02  E-value=5.2e-09  Score=101.24  Aligned_cols=154  Identities=18%  Similarity=0.145  Sum_probs=104.3

Q ss_pred             EeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCCCccEEE
Q 019722           40 ITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLPLNLLI  119 (336)
Q Consensus        40 ItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~lv  119 (336)
                      |+||++|+|.++++.|...|+.|+.+.+...+...        ....++..+.+|.+..+..+.                
T Consensus        43 l~~~~~g~~~~~~~~~~~~g~~v~~~~~~~~~~~~--------~~~~~~~~~~~d~~~~~~~~~----------------   98 (450)
T PRK08261         43 LVGGAGRLAEALAALLAGLGYDVVANNDGGLTWAA--------GWGDRFGALVFDATGITDPAD----------------   98 (450)
T ss_pred             EEccCchhHHHHHHHHhhCCCeeeecCcccccccc--------CcCCcccEEEEECCCCCCHHH----------------
Confidence            78889999999999999999999988766441100        001223323333333322221                


Q ss_pred             EcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcccccccccCCCCC
Q 019722          120 NNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSH  199 (336)
Q Consensus       120 ~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~~~~~~~~~  199 (336)
                                              +.+.+.+++..++.|..       .||||+++|.....                  
T Consensus        99 ------------------------l~~~~~~~~~~l~~l~~-------~griv~i~s~~~~~------------------  129 (450)
T PRK08261         99 ------------------------LKALYEFFHPVLRSLAP-------CGRVVVLGRPPEAA------------------  129 (450)
T ss_pred             ------------------------HHHHHHHHHHHHHhccC-------CCEEEEEccccccC------------------
Confidence                                    12344677777777753       47999999975432                  


Q ss_pred             CChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHHHHHHHHhhcCChHHHHHHHHHHH
Q 019722          200 YDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSKLLKTIPQGAATTCYVA  279 (336)
Q Consensus       200 ~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~  279 (336)
                        ....|+.+|+++.+++|++++|+ +.+  |++|.|.|+.                         ..+++.+..+.|++
T Consensus       130 --~~~~~~~akaal~gl~rsla~E~-~~g--i~v~~i~~~~-------------------------~~~~~~~~~~~~l~  179 (450)
T PRK08261        130 --ADPAAAAAQRALEGFTRSLGKEL-RRG--ATAQLVYVAP-------------------------GAEAGLESTLRFFL  179 (450)
T ss_pred             --CchHHHHHHHHHHHHHHHHHHHh-hcC--CEEEEEecCC-------------------------CCHHHHHHHHHHhc
Confidence              12359999999999999999999 666  9999999985                         23455556666665


Q ss_pred             hcCccccCCceeeccCcc
Q 019722          280 IHPRLVNVSGKYFADCNE  297 (336)
Q Consensus       280 ~~~~~~~~~G~~~~~~~~  297 (336)
                      + +...+++|+.+..++.
T Consensus       180 s-~~~a~~~g~~i~~~~~  196 (450)
T PRK08261        180 S-PRSAYVSGQVVRVGAA  196 (450)
T ss_pred             C-CccCCccCcEEEecCC
Confidence            5 6667778877766554

>PRK12320 hypothetical protein; Provisional

Probab=99.02  E-value=5.6e-08  Score=97.31  Aligned_cols=186  Identities=12%  Similarity=-0.018  Sum_probs=116.8

Q ss_pred             EEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCCCcc
Q 019722           37 TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLPLN  116 (336)
Q Consensus        37 ~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id  116 (336)
                      ++|||||+|.||++++++|+++|++|++++|+....         .  ..++.++++|++++. +..++       .++|
T Consensus         2 kILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~~---------~--~~~ve~v~~Dl~d~~-l~~al-------~~~D   62 (699)
T PRK12320          2 QILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPHDA---------L--DPRVDYVCASLRNPV-LQELA-------GEAD   62 (699)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEEeCChhhc---------c--cCCceEEEccCCCHH-HHHHh-------cCCC
Confidence            589999999999999999999999999999875321         0  246889999999873 33332       2589


Q ss_pred             EEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcccccccccCC
Q 019722          117 LLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRN  196 (336)
Q Consensus       117 ~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~~~~~~  196 (336)
                      ++||+|+....          ....+|+.+...+++++..    .      +.++|++||..+..               
T Consensus        63 ~VIHLAa~~~~----------~~~~vNv~Gt~nLleAA~~----~------GvRiV~~SS~~G~~---------------  107 (699)
T PRK12320         63 AVIHLAPVDTS----------APGGVGITGLAHVANAAAR----A------GARLLFVSQAAGRP---------------  107 (699)
T ss_pred             EEEEcCccCcc----------chhhHHHHHHHHHHHHHHH----c------CCeEEEEECCCCCC---------------
Confidence            99999986321          1124788888888887743    2      24899998863210               


Q ss_pred             CCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCcc-chhHHHHHHHHHHhh---cCChHHHH
Q 019722          197 KSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRER-EGFITDLVFFLTSKL---LKTIPQGA  272 (336)
Q Consensus       197 ~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~-~~~~~~~~~~~~~~~---~~~~~~~a  272 (336)
                         .    .|.    ..+.+.+    .   .+  +.+..+.|..+.++..... ...............   ....+|.+
T Consensus       108 ---~----~~~----~aE~ll~----~---~~--~p~~ILR~~nVYGp~~~~~~~r~I~~~l~~~~~~~pI~vIyVdDvv  167 (699)
T PRK12320        108 ---E----LYR----QAETLVS----T---GW--APSLVIRIAPPVGRQLDWMVCRTVATLLRSKVSARPIRVLHLDDLV  167 (699)
T ss_pred             ---c----ccc----HHHHHHH----h---cC--CCEEEEeCceecCCCCcccHhHHHHHHHHHHHcCCceEEEEHHHHH
Confidence               0    121    1222221    1   23  7788999999988743221 112222221111111   12568889


Q ss_pred             HHHHHHHhcCccccCCceeeccCcccccc
Q 019722          273 ATTCYVAIHPRLVNVSGKYFADCNEAWTS  301 (336)
Q Consensus       273 ~~~~~l~~~~~~~~~~G~~~~~~~~~~~~  301 (336)
                      .+++.++..+    .+| .|+..+....+
T Consensus       168 ~alv~al~~~----~~G-iyNIG~~~~~S  191 (699)
T PRK12320        168 RFLVLALNTD----RNG-VVDLATPDTTN  191 (699)
T ss_pred             HHHHHHHhCC----CCC-EEEEeCCCeeE
Confidence            9888887632    245 66676665444

>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]

Probab=99.01  E-value=1.7e-08  Score=88.32  Aligned_cols=232  Identities=14%  Similarity=0.079  Sum_probs=149.0

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCC--CEEEEeeC-ChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHh
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRG--ARLVLPAR-SLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHS  110 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G--~~V~~~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  110 (336)
                      ..+.++||||.+.||...+..++..-  ++.+.++- .--.....+++.+.   ..+..+++.|+.+...+..++.    
T Consensus         5 ~~~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~~~~l~~~~n---~p~ykfv~~di~~~~~~~~~~~----   77 (331)
T KOG0747|consen    5 KEKNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSNLKNLEPVRN---SPNYKFVEGDIADADLVLYLFE----   77 (331)
T ss_pred             ccceEEEecCcCcchhhhhhhcccCCCCCcEEEEeecccccccchhhhhcc---CCCceEeeccccchHHHHhhhc----
Confidence            44899999999999999999999873  44444331 10000222333322   5689999999999988887775    


Q ss_pred             cCCCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccccc
Q 019722          111 LNLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYL  190 (336)
Q Consensus       111 ~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~  190 (336)
                       ..++|.|+|-|+..+-.  .+.-+--+....|+++...|++...-...-        .+.|.+|+.- .++..+.   +
T Consensus        78 -~~~id~vihfaa~t~vd--~s~~~~~~~~~nnil~t~~Lle~~~~sg~i--------~~fvhvSTde-VYGds~~---~  142 (331)
T KOG0747|consen   78 -TEEIDTVIHFAAQTHVD--RSFGDSFEFTKNNILSTHVLLEAVRVSGNI--------RRFVHVSTDE-VYGDSDE---D  142 (331)
T ss_pred             -cCchhhhhhhHhhhhhh--hhcCchHHHhcCCchhhhhHHHHHHhccCe--------eEEEEecccc-eecCccc---c
Confidence             34899999999854432  122233456788999999998888776522        4889999852 3331111   1


Q ss_pred             ccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHHHHHHHH--------
Q 019722          191 GQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTS--------  262 (336)
Q Consensus       191 ~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~--------  262 (336)
                      ..++ +.+...+...|+++|+|.+++++++.+.++     +-+..+.-+.|..|..-.. ...+++......        
T Consensus       143 ~~~~-E~s~~nPtnpyAasKaAaE~~v~Sy~~sy~-----lpvv~~R~nnVYGP~q~~~-klipkFi~l~~~~~~~~i~g  215 (331)
T KOG0747|consen  143 AVVG-EASLLNPTNPYAASKAAAEMLVRSYGRSYG-----LPVVTTRMNNVYGPNQYPE-KLIPKFIKLAMRGKEYPIHG  215 (331)
T ss_pred             cccc-ccccCCCCCchHHHHHHHHHHHHHHhhccC-----CcEEEEeccCccCCCcChH-HHhHHHHHHHHhCCCcceec
Confidence            1111 222234455799999999999999998876     8999999999999965542 122222221110        


Q ss_pred             -----hhcCChHHHHHHHHHHHhcCccccCCceeeccCccc
Q 019722          263 -----KLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEA  298 (336)
Q Consensus       263 -----~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  298 (336)
                           ....-.+|+++++.-++..    +.-|+.++.....
T Consensus       216 ~g~~~rs~l~veD~~ea~~~v~~K----g~~geIYNIgtd~  252 (331)
T KOG0747|consen  216 DGLQTRSYLYVEDVSEAFKAVLEK----GELGEIYNIGTDD  252 (331)
T ss_pred             CcccceeeEeHHHHHHHHHHHHhc----CCccceeeccCcc
Confidence                 0112357778777777653    2257787665443

>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]

Probab=98.93  E-value=5.6e-08  Score=85.09  Aligned_cols=215  Identities=19%  Similarity=0.175  Sum_probs=141.1

Q ss_pred             cCCCCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHH
Q 019722           27 TDGCPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVS  106 (336)
Q Consensus        27 ~~~~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~  106 (336)
                      +-|..+++|-++-|.||||.+|+.++.+|++.|..|++-.|-.+.....++-+-.   -.++.++..|+.|+++|+++++
T Consensus        53 tGGRsS~sGiVaTVFGAtGFlGryvvnklak~GSQviiPyR~d~~~~r~lkvmGd---LGQvl~~~fd~~DedSIr~vvk  129 (391)
T KOG2865|consen   53 TGGRSSVSGIVATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDEYDPRHLKVMGD---LGQVLFMKFDLRDEDSIRAVVK  129 (391)
T ss_pred             CCCcccccceEEEEecccccccHHHHHHHhhcCCeEEEeccCCccchhheeeccc---ccceeeeccCCCCHHHHHHHHH
Confidence            3456789999999999999999999999999999999999876543333222211   2689999999999999999998


Q ss_pred             HHHhcCCCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCc
Q 019722          107 QFHSLNLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDM  186 (336)
Q Consensus       107 ~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~  186 (336)
                             +-+++||.-|--......+.      -++|+.+.-.+++.+...-.+         |.|.+|+..+.      
T Consensus       130 -------~sNVVINLIGrd~eTknf~f------~Dvn~~~aerlAricke~GVe---------rfIhvS~Lgan------  181 (391)
T KOG2865|consen  130 -------HSNVVINLIGRDYETKNFSF------EDVNVHIAERLARICKEAGVE---------RFIHVSCLGAN------  181 (391)
T ss_pred             -------hCcEEEEeeccccccCCccc------ccccchHHHHHHHHHHhhChh---------heeehhhcccc------
Confidence                   56899999985433322232      345666666666655554333         88999997643      


Q ss_pred             ccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHHHHHH---HHh
Q 019722          187 IRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFL---TSK  263 (336)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~---~~~  263 (336)
                                   ..+..-|--+|++.+-.++.   ++.      ....|.|..+...--+-+ ..+...++.+   +..
T Consensus       182 -------------v~s~Sr~LrsK~~gE~aVrd---afP------eAtIirPa~iyG~eDrfl-n~ya~~~rk~~~~pL~  238 (391)
T KOG2865|consen  182 -------------VKSPSRMLRSKAAGEEAVRD---AFP------EATIIRPADIYGTEDRFL-NYYASFWRKFGFLPLI  238 (391)
T ss_pred             -------------ccChHHHHHhhhhhHHHHHh---hCC------cceeechhhhcccchhHH-HHHHHHHHhcCceeee
Confidence                         23334577888888765554   222      234567766654432221 1122222211   111


Q ss_pred             hcC--C------hHHHHHHHHHHHhcCccccCCceeeccCccc
Q 019722          264 LLK--T------IPQGAATTCYVAIHPRLVNVSGKYFADCNEA  298 (336)
Q Consensus       264 ~~~--~------~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  298 (336)
                      ..+  +      +-|+|++++..+.+|++   .|..|..-|..
T Consensus       239 ~~GekT~K~PVyV~DVaa~IvnAvkDp~s---~Gktye~vGP~  278 (391)
T KOG2865|consen  239 GKGEKTVKQPVYVVDVAAAIVNAVKDPDS---MGKTYEFVGPD  278 (391)
T ss_pred             cCCcceeeccEEEehHHHHHHHhccCccc---cCceeeecCCc
Confidence            111  1      25779999999988865   68888766653

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=98.91  E-value=2e-07  Score=81.64  Aligned_cols=218  Identities=14%  Similarity=0.092  Sum_probs=123.5

Q ss_pred             EEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCCCccE
Q 019722           38 AIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLPLNL  117 (336)
Q Consensus        38 ~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~  117 (336)
                      ++||||||-||++++.+|.+.|++|+++.|++.+.+...        +..+.       ..+.+....+      .++|+
T Consensus         1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~~~--------~~~v~-------~~~~~~~~~~------~~~Da   59 (297)
T COG1090           1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQNL--------HPNVT-------LWEGLADALT------LGIDA   59 (297)
T ss_pred             CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchhhhc--------Ccccc-------ccchhhhccc------CCCCE
Confidence            589999999999999999999999999999987654311        11111       1122222111      17999


Q ss_pred             EEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcccccccccCCC
Q 019722          118 LINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNK  197 (336)
Q Consensus       118 lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~~~~~~~  197 (336)
                      +||-||-.-.....+.+.=+..    +.|....++.+.....+...    ++++.+-+|..+.|+......+.+.     
T Consensus        60 vINLAG~~I~~rrWt~~~K~~i----~~SRi~~T~~L~e~I~~~~~----~P~~~isaSAvGyYG~~~~~~~tE~-----  126 (297)
T COG1090          60 VINLAGEPIAERRWTEKQKEEI----RQSRINTTEKLVELIAASET----KPKVLISASAVGYYGHSGDRVVTEE-----  126 (297)
T ss_pred             EEECCCCccccccCCHHHHHHH----HHHHhHHHHHHHHHHHhccC----CCcEEEecceEEEecCCCceeeecC-----
Confidence            9999995433322344333334    44666777777777765432    4666666777787774433222221     


Q ss_pred             CCCChhhHhHHHHHHHHHHHHHHHHHHcc-CCCcEEEEEeeCCceeCCCCCccchhHHHHHHHHH--------HhhcCCh
Q 019722          198 SHYDATRAYALSKLANVLHTKELAQRLKQ-MEANVTVNCVHPGIVRTRLTREREGFITDLVFFLT--------SKLLKTI  268 (336)
Q Consensus       198 ~~~~~~~~Y~~sK~a~~~l~~~la~e~~~-~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~--------~~~~~~~  268 (336)
                      . .++.       -.+..+++.|-.+..+ +..++||+.+.-|.|-++-.-....+.+.+...+.        ...-...
T Consensus       127 ~-~~g~-------~Fla~lc~~WE~~a~~a~~~gtRvvllRtGvVLs~~GGaL~~m~~~fk~glGG~~GsGrQ~~SWIhi  198 (297)
T COG1090         127 S-PPGD-------DFLAQLCQDWEEEALQAQQLGTRVVLLRTGVVLSPDGGALGKMLPLFKLGLGGKLGSGRQWFSWIHI  198 (297)
T ss_pred             C-CCCC-------ChHHHHHHHHHHHHhhhhhcCceEEEEEEEEEecCCCcchhhhcchhhhccCCccCCCCceeeeeeH
Confidence            1 1111       1222345555444322 12249999999999976533222111111111110        0112457


Q ss_pred             HHHHHHHHHHHhcCccccCCceeeccCcccccc
Q 019722          269 PQGAATTCYVAIHPRLVNVSGKYFADCNEAWTS  301 (336)
Q Consensus       269 ~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~~  301 (336)
                      +|.+++++|++.++..   .|.+- .....++.
T Consensus       199 eD~v~~I~fll~~~~l---sGp~N-~taP~PV~  227 (297)
T COG1090         199 EDLVNAILFLLENEQL---SGPFN-LTAPNPVR  227 (297)
T ss_pred             HHHHHHHHHHHhCcCC---CCccc-ccCCCcCc
Confidence            9999999999986553   45433 34444443

>COG4982 3-oxoacyl-[acyl-carrier protein]

Probab=98.82  E-value=6e-07  Score=86.12  Aligned_cols=225  Identities=19%  Similarity=0.159  Sum_probs=144.1

Q ss_pred             CCCCCCCEEEEeCCC-ChHHHHHHHHHHHCCCEEEEeeCCh-HHHHHHHHHHHhhC--CCCceEEEeccCCCHHHHHHHH
Q 019722           30 CPNLSSVTAIITGAT-SGIGAETARVLAKRGARLVLPARSL-KAAEEAKARLASDC--PGSDIVVLPLDLSSLSSVRNFV  105 (336)
Q Consensus        30 ~~~l~gk~~lItGgs-~gIG~aia~~L~~~G~~V~~~~r~~-~~~~~~~~~l~~~~--~~~~~~~~~~Dl~~~~~v~~~~  105 (336)
                      ..+..++++|||||+ +.||.+++..|++.|++||++..+- +...+..+.|-+.+  ++..+.++.+++.+...|+.++
T Consensus       391 ~~~y~d~valVTGA~~gSIaa~Vv~~LL~gGAtVI~TTS~~s~~r~efyr~LYa~~a~~ga~LwvVpaN~~SysDVdAlI  470 (866)
T COG4982         391 GGTYGDKVALVTGASKGSIAAAVVARLLAGGATVIATTSRLSEERTEFYRSLYARHARYGAALWVVPANMGSYSDVDALI  470 (866)
T ss_pred             CCCcccceEEEecCCCcchHHHHHHHHHhCCcEEEEEcccccHHHHHHHHHHHHhhCCCCceEEEEeccccchhhHHHHH
Confidence            455789999999999 7899999999999999999987554 33445555554443  3677899999999999999999


Q ss_pred             HHHHhcCC--------------CccEEEEcccCCCCCCCCCchh--hhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCC-
Q 019722          106 SQFHSLNL--------------PLNLLINNAGKFAHQHAISEDG--IEMTFATNYLGHFLLTKLLLKKMIETAKATGIQ-  168 (336)
Q Consensus       106 ~~~~~~~~--------------~id~lv~nAg~~~~~~~~~~~~--~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~-  168 (336)
                      +.|-+...              .++.+|=-|++.... ++..-+  -+-.+.+-+++..+++-.+.+.-..    .+.. 
T Consensus       471 ewIg~eq~~t~g~~s~~~k~a~~ptll~PFAAp~v~G-~l~~agsraE~~~rilLw~V~Rliggl~~~~s~----r~v~~  545 (866)
T COG4982         471 EWIGDEQTETVGPQSIHIKLAWTPTLLFPFAAPRVSG-ELADAGSRAEFAMRILLWNVLRLIGGLKKQGSS----RGVDT  545 (866)
T ss_pred             HHhccccccccCCcceecccccCcceeeecccCCccC-ccccCCchHHHHHHHHHHHHHHHHHHhhhhccc----cCccc
Confidence            99965421              156666556544333 222211  2334455555555544443333221    1222 


Q ss_pred             -CeEEEEcCCccccccCCcccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCcee-CCCC
Q 019722          169 -GRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVR-TRLT  246 (336)
Q Consensus       169 -grIV~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~-T~~~  246 (336)
                       -.||.-.|.....                  +.+-.+|+-+|++++.++..|..|-..- ..+.+..-.-||++ |.++
T Consensus       546 R~hVVLPgSPNrG~------------------FGgDGaYgEsK~aldav~~RW~sEs~Wa-~~vsl~~A~IGWtrGTGLM  606 (866)
T COG4982         546 RLHVVLPGSPNRGM------------------FGGDGAYGESKLALDAVVNRWHSESSWA-ARVSLAHALIGWTRGTGLM  606 (866)
T ss_pred             ceEEEecCCCCCCc------------------cCCCcchhhHHHHHHHHHHHhhccchhh-HHHHHhhhheeeecccccc
Confidence             3455555643222                  5666789999999999999988875321 12777778889997 6655


Q ss_pred             CccchhHHHHHHHHHHhhcCChHHHHHHHHHHHh
Q 019722          247 REREGFITDLVFFLTSKLLKTIPQGAATTCYVAI  280 (336)
Q Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~  280 (336)
                      ....-.... .+. ..-+..+++|.+..++-+++
T Consensus       607 g~Ndiiv~a-iEk-~GV~tyS~~EmA~~LLgL~s  638 (866)
T COG4982         607 GHNDIIVAA-IEK-AGVRTYSTDEMAFNLLGLAS  638 (866)
T ss_pred             CCcchhHHH-HHH-hCceecCHHHHHHHHHhhcc
Confidence            553221111 111 12234577888888888876

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=98.69  E-value=1.1e-07  Score=86.40  Aligned_cols=85  Identities=15%  Similarity=0.222  Sum_probs=66.4

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCE-EEEeeCCh---HHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHH
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGAR-LVLPARSL---KAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVS  106 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~~-V~~~~r~~---~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~  106 (336)
                      .++++|+++|+|| ||+|++++..|++.|++ |++++|+.   ++++++.+++....  ..+.+..+|+++.+++...++
T Consensus       122 ~~~~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~--~~~~~~~~d~~~~~~~~~~~~  198 (289)
T PRK12548        122 VDVKGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEV--PECIVNVYDLNDTEKLKAEIA  198 (289)
T ss_pred             CCcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcC--CCceeEEechhhhhHHHhhhc
Confidence            3578999999999 69999999999999985 99999997   67777777775442  345566788887777665443


Q ss_pred             HHHhcCCCccEEEEcccCC
Q 019722          107 QFHSLNLPLNLLINNAGKF  125 (336)
Q Consensus       107 ~~~~~~~~id~lv~nAg~~  125 (336)
                             ..|+||||..+.
T Consensus       199 -------~~DilINaTp~G  210 (289)
T PRK12548        199 -------SSDILVNATLVG  210 (289)
T ss_pred             -------cCCEEEEeCCCC
Confidence                   469999998654

>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated

Probab=98.67  E-value=8.1e-08  Score=90.67  Aligned_cols=80  Identities=23%  Similarity=0.272  Sum_probs=62.4

Q ss_pred             CCCCCCEEEEeCC---------------CC-hHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEecc
Q 019722           31 PNLSSVTAIITGA---------------TS-GIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLD   94 (336)
Q Consensus        31 ~~l~gk~~lItGg---------------s~-gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D   94 (336)
                      .+++||++|||||               ++ .+|+++|++|+++|++|++++++.+ ..         . ...  +..+|
T Consensus       184 ~~l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~-~~---------~-~~~--~~~~d  250 (399)
T PRK05579        184 KDLAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVN-LP---------T-PAG--VKRID  250 (399)
T ss_pred             cccCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCcc-cc---------C-CCC--cEEEc
Confidence            4589999999999               44 4999999999999999999998752 11         0 112  34679


Q ss_pred             CCCHHHHHHHHHHHHhcCCCccEEEEcccCCC
Q 019722           95 LSSLSSVRNFVSQFHSLNLPLNLLINNAGKFA  126 (336)
Q Consensus        95 l~~~~~v~~~~~~~~~~~~~id~lv~nAg~~~  126 (336)
                      +++.+++.+.++   +.++++|++|+|||+..
T Consensus       251 v~~~~~~~~~v~---~~~~~~DilI~~Aav~d  279 (399)
T PRK05579        251 VESAQEMLDAVL---AALPQADIFIMAAAVAD  279 (399)
T ss_pred             cCCHHHHHHHHH---HhcCCCCEEEEcccccc
Confidence            998888777665   44678999999999754

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=98.62  E-value=4.5e-07  Score=77.56  Aligned_cols=84  Identities=25%  Similarity=0.342  Sum_probs=67.8

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHh
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHS  110 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  110 (336)
                      .++++++++|+||+|++|+++++.|+++|++|++++|+.+++++..+.+.+..   ......+|..+.+++..+++    
T Consensus        24 ~~l~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~---~~~~~~~~~~~~~~~~~~~~----   96 (194)
T cd01078          24 KDLKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARF---GEGVGAVETSDDAARAAAIK----   96 (194)
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhc---CCcEEEeeCCCHHHHHHHHh----
Confidence            46889999999999999999999999999999999999998888877765432   33455678888888777664    


Q ss_pred             cCCCccEEEEcccC
Q 019722          111 LNLPLNLLINNAGK  124 (336)
Q Consensus       111 ~~~~id~lv~nAg~  124 (336)
                         ..|++|++...
T Consensus        97 ---~~diVi~at~~  107 (194)
T cd01078          97 ---GADVVFAAGAA  107 (194)
T ss_pred             ---cCCEEEECCCC
Confidence               56888886653

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]

Probab=98.62  E-value=4.9e-07  Score=85.74  Aligned_cols=199  Identities=18%  Similarity=0.205  Sum_probs=125.9

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCC--C-EEEEeeCChH-----------HHHHHHHHHHhhCCC--CceEEEeccCC
Q 019722           33 LSSVTAIITGATSGIGAETARVLAKRG--A-RLVLPARSLK-----------AAEEAKARLASDCPG--SDIVVLPLDLS   96 (336)
Q Consensus        33 l~gk~~lItGgs~gIG~aia~~L~~~G--~-~V~~~~r~~~-----------~~~~~~~~l~~~~~~--~~~~~~~~Dl~   96 (336)
                      ++||+++||||||.+|+-++..|++.-  . ++++.-|...           ..+.+.+.+++..|+  .++..+.+|++
T Consensus        10 ~~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GDi~   89 (467)
T KOG1221|consen   10 YKNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGDIS   89 (467)
T ss_pred             hCCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceecccccc
Confidence            689999999999999999999999864  2 6777766421           122344455555443  67889999999


Q ss_pred             CHHH-HHHHHHHHHhcCCCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEc
Q 019722           97 SLSS-VRNFVSQFHSLNLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVS  175 (336)
Q Consensus        97 ~~~~-v~~~~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vs  175 (336)
                      +++- +..--.+.  ....+|++||+|+....     .+.++..+.+|.+|+..+++.+.....-        -..|.+|
T Consensus        90 ~~~LGis~~D~~~--l~~eV~ivih~AAtvrF-----de~l~~al~iNt~Gt~~~l~lak~~~~l--------~~~vhVS  154 (467)
T KOG1221|consen   90 EPDLGISESDLRT--LADEVNIVIHSAATVRF-----DEPLDVALGINTRGTRNVLQLAKEMVKL--------KALVHVS  154 (467)
T ss_pred             CcccCCChHHHHH--HHhcCCEEEEeeeeecc-----chhhhhhhhhhhHhHHHHHHHHHHhhhh--------heEEEee
Confidence            7642 11111111  12279999999997543     2567788999999999999988776543        2678888


Q ss_pred             CCcccccc----------CCcccccc------cccCCC------C-CCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEE
Q 019722          176 SSIHSWFS----------GDMIRYLG------QISRNK------S-HYDATRAYALSKLANVLHTKELAQRLKQMEANVT  232 (336)
Q Consensus       176 S~~~~~~~----------~~~~~~~~------~~~~~~------~-~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~  232 (336)
                      ........          +...+.+.      ...++.      . -......|.-+|+..+.+...-+.       ++-
T Consensus       155 TAy~n~~~~~i~E~~y~~~~~~~~~~~i~~~~~~~~~~ld~~~~~l~~~~PNTYtfTKal~E~~i~~~~~-------~lP  227 (467)
T KOG1221|consen  155 TAYSNCNVGHIEEKPYPMPETCNPEKILKLDENLSDELLDQKAPKLLGGWPNTYTFTKALAEMVIQKEAE-------NLP  227 (467)
T ss_pred             hhheecccccccccccCccccCCHHHHHhhhccchHHHHHHhhHHhcCCCCCceeehHhhHHHHHHhhcc-------CCC
Confidence            87655211          11001110      000000      0 011122488888877776655332       278


Q ss_pred             EEEeeCCceeCCCCCccchhH
Q 019722          233 VNCVHPGIVRTRLTREREGFI  253 (336)
Q Consensus       233 vn~v~PG~v~T~~~~~~~~~~  253 (336)
                      +..++|..|.+......+++.
T Consensus       228 ivIiRPsiI~st~~EP~pGWi  248 (467)
T KOG1221|consen  228 LVIIRPSIITSTYKEPFPGWI  248 (467)
T ss_pred             eEEEcCCceeccccCCCCCcc
Confidence            888999999887777665543

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=98.55  E-value=2e-06  Score=75.55  Aligned_cols=218  Identities=13%  Similarity=0.081  Sum_probs=125.6

Q ss_pred             EEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCCCccE
Q 019722           38 AIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLPLNL  117 (336)
Q Consensus        38 ~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~  117 (336)
                      ++|+||+|.+|+++++.|++.+++|.++.|+..+  +..++++.    ..++++++|+.+++++.++++       ++|+
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~--~~~~~l~~----~g~~vv~~d~~~~~~l~~al~-------g~d~   67 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSS--DRAQQLQA----LGAEVVEADYDDPESLVAALK-------GVDA   67 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHH--HHHHHHHH----TTTEEEES-TT-HHHHHHHHT-------TCSE
T ss_pred             CEEECCccHHHHHHHHHHHhCCCCcEEEEeccch--hhhhhhhc----ccceEeecccCCHHHHHHHHc-------CCce
Confidence            6899999999999999999999999999999843  22334443    245677999999999988887       8999


Q ss_pred             EEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcccccccccCCC
Q 019722          118 LINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNK  197 (336)
Q Consensus       118 lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~~~~~~~  197 (336)
                      +|++.+...      ....+..        ..+++++...-.         .++| .||........            .
T Consensus        68 v~~~~~~~~------~~~~~~~--------~~li~Aa~~agV---------k~~v-~ss~~~~~~~~------------~  111 (233)
T PF05368_consen   68 VFSVTPPSH------PSELEQQ--------KNLIDAAKAAGV---------KHFV-PSSFGADYDES------------S  111 (233)
T ss_dssp             EEEESSCSC------CCHHHHH--------HHHHHHHHHHT----------SEEE-ESEESSGTTTT------------T
T ss_pred             EEeecCcch------hhhhhhh--------hhHHHhhhcccc---------ceEE-EEEeccccccc------------c
Confidence            998888643      1111111        224455444322         3666 45543322100            0


Q ss_pred             CCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccch---hHHH---HHHHHH---Hhhc-CC
Q 019722          198 SHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREG---FITD---LVFFLT---SKLL-KT  267 (336)
Q Consensus       198 ~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~---~~~~---~~~~~~---~~~~-~~  267 (336)
                      ...+... +-..|+.++.+.+..       +  +....|.||+...........   ....   ......   .... .+
T Consensus       112 ~~~p~~~-~~~~k~~ie~~l~~~-------~--i~~t~i~~g~f~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (233)
T PF05368_consen  112 GSEPEIP-HFDQKAEIEEYLRES-------G--IPYTIIRPGFFMENLLPPFAPVVDIKKSKDVVTLPGPGNQKAVPVTD  181 (233)
T ss_dssp             TSTTHHH-HHHHHHHHHHHHHHC-------T--SEBEEEEE-EEHHHHHTTTHHTTCSCCTSSEEEEETTSTSEEEEEEH
T ss_pred             cccccch-hhhhhhhhhhhhhhc-------c--ccceeccccchhhhhhhhhcccccccccceEEEEccCCCcccccccc
Confidence            0022333 334676666544433       4  899999999875333221100   0000   000000   0112 25


Q ss_pred             hHHHHHHHHHHHhcCccccCCceeeccCcccccccCCCCHHHHHHHHHHHHHhhccC
Q 019722          268 IPQGAATTCYVAIHPRLVNVSGKYFADCNEAWTSKLGSNSNEASRLWAASELLVSRD  324 (336)
Q Consensus       268 ~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~  324 (336)
                      .+|++..+..++.+|. .+-.|+++...+.....         +++-+.+.+.+|+.
T Consensus       182 ~~Dvg~~va~il~~p~-~~~~~~~~~~~~~~~t~---------~eia~~~s~~~G~~  228 (233)
T PF05368_consen  182 TRDVGRAVAAILLDPE-KHNNGKTIFLAGETLTY---------NEIAAILSKVLGKK  228 (233)
T ss_dssp             HHHHHHHHHHHHHSGG-GTTEEEEEEEGGGEEEH---------HHHHHHHHHHHTSE
T ss_pred             HHHHHHHHHHHHcChH-HhcCCEEEEeCCCCCCH---------HHHHHHHHHHHCCc
Confidence            6889999999998654 33367888776643322         55555555666553

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]

Probab=98.47  E-value=3.5e-06  Score=78.77  Aligned_cols=176  Identities=18%  Similarity=0.166  Sum_probs=107.7

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      ....+-.+++|+||+|++|+-+++.|.++|+.|..+.|+..+.++... +...  +.....+..|.....++..-+-+..
T Consensus        74 ~~~~~~~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~-~~~~--d~~~~~v~~~~~~~~d~~~~~~~~~  150 (411)
T KOG1203|consen   74 NNSKKPTTVLVVGATGKVGRRIVKILLKRGFSVRALVRDEQKAEDLLG-VFFV--DLGLQNVEADVVTAIDILKKLVEAV  150 (411)
T ss_pred             CCCCCCCeEEEecCCCchhHHHHHHHHHCCCeeeeeccChhhhhhhhc-cccc--ccccceeeeccccccchhhhhhhhc
Confidence            455677899999999999999999999999999999999988887766 1111  3455566666655544433322221


Q ss_pred             hcCCCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcccc
Q 019722          110 SLNLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRY  189 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~  189 (336)
                      .  -...+++.++|..+..+     +..--..|.+.|...+++++.....         .|+|+++|..+....      
T Consensus       151 ~--~~~~~v~~~~ggrp~~e-----d~~~p~~VD~~g~knlvdA~~~aGv---------k~~vlv~si~~~~~~------  208 (411)
T KOG1203|consen  151 P--KGVVIVIKGAGGRPEEE-----DIVTPEKVDYEGTKNLVDACKKAGV---------KRVVLVGSIGGTKFN------  208 (411)
T ss_pred             c--ccceeEEecccCCCCcc-----cCCCcceecHHHHHHHHHHHHHhCC---------ceEEEEEeecCcccC------
Confidence            1  13456666666543322     2223345566677778888843332         489999887665431      


Q ss_pred             cccccCCCCCCChhhHhHHHHHHHHHHH-HHHHHHHccCCCcEEEEEeeCCceeCCC
Q 019722          190 LGQISRNKSHYDATRAYALSKLANVLHT-KELAQRLKQMEANVTVNCVHPGIVRTRL  245 (336)
Q Consensus       190 ~~~~~~~~~~~~~~~~Y~~sK~a~~~l~-~~la~e~~~~g~~I~vn~v~PG~v~T~~  245 (336)
                                .+.+..+.   .....-. +....++...|  +....|.||....+.
T Consensus       209 ----------~~~~~~~~---~~~~~~~k~~~e~~~~~Sg--l~ytiIR~g~~~~~~  250 (411)
T KOG1203|consen  209 ----------QPPNILLL---NGLVLKAKLKAEKFLQDSG--LPYTIIRPGGLEQDT  250 (411)
T ss_pred             ----------CCchhhhh---hhhhhHHHHhHHHHHHhcC--CCcEEEeccccccCC
Confidence                      11111111   1111111 22233344555  999999999886543

>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic

Probab=98.41  E-value=8.8e-07  Score=83.37  Aligned_cols=80  Identities=19%  Similarity=0.308  Sum_probs=61.8

Q ss_pred             CCCCCEEEEeCC---------------CCh-HHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccC
Q 019722           32 NLSSVTAIITGA---------------TSG-IGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDL   95 (336)
Q Consensus        32 ~l~gk~~lItGg---------------s~g-IG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl   95 (336)
                      +++||++|||||               ||| +|.++|++|..+|++|+++++.....          . ...+  ..+|+
T Consensus       182 ~~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~----------~-~~~~--~~~~v  248 (390)
T TIGR00521       182 DLEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSLL----------T-PPGV--KSIKV  248 (390)
T ss_pred             ccCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCccC----------C-CCCc--EEEEe
Confidence            589999999999               667 99999999999999999988665321          1 2222  45789


Q ss_pred             CCHHHH-HHHHHHHHhcCCCccEEEEcccCCCC
Q 019722           96 SSLSSV-RNFVSQFHSLNLPLNLLINNAGKFAH  127 (336)
Q Consensus        96 ~~~~~v-~~~~~~~~~~~~~id~lv~nAg~~~~  127 (336)
                      ++.+++ +.+++++   ++++|++|+|||+...
T Consensus       249 ~~~~~~~~~~~~~~---~~~~D~~i~~Aavsd~  278 (390)
T TIGR00521       249 STAEEMLEAALNEL---AKDFDIFISAAAVADF  278 (390)
T ss_pred             ccHHHHHHHHHHhh---cccCCEEEEccccccc
Confidence            888888 6565443   4679999999997644

This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.

>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=98.37  E-value=8.5e-06  Score=73.03  Aligned_cols=196  Identities=14%  Similarity=0.037  Sum_probs=118.0

Q ss_pred             EEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCCCcc
Q 019722           37 TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLPLN  116 (336)
Q Consensus        37 ~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id  116 (336)
                      .+|||||||.+|.+++++|+++|++|.+..|+++++....         ..+.+...|+.++.++...++       ++|
T Consensus         2 ~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~~---------~~v~~~~~d~~~~~~l~~a~~-------G~~   65 (275)
T COG0702           2 KILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAALA---------GGVEVVLGDLRDPKSLVAGAK-------GVD   65 (275)
T ss_pred             eEEEEecccchHHHHHHHHHhCCCEEEEEEeCHHHHHhhc---------CCcEEEEeccCCHhHHHHHhc-------ccc
Confidence            6899999999999999999999999999999998776543         478889999999999999887       788


Q ss_pred             EEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcccccccccCC
Q 019722          117 LLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRN  196 (336)
Q Consensus       117 ~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~~~~~~  196 (336)
                      .+++..+... ...       ..............+...    ..      ...++.+|+.....               
T Consensus        66 ~~~~i~~~~~-~~~-------~~~~~~~~~~~~~a~~a~----~~------~~~~~~~s~~~~~~---------------  112 (275)
T COG0702          66 GVLLISGLLD-GSD-------AFRAVQVTAVVRAAEAAG----AG------VKHGVSLSVLGADA---------------  112 (275)
T ss_pred             EEEEEecccc-ccc-------chhHHHHHHHHHHHHHhc----CC------ceEEEEeccCCCCC---------------
Confidence            8888888654 211       112222223333333333    10      13566666654322               


Q ss_pred             CCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEee-CCceeCCCCCccchhHHHHHHHHH----HhhcCChHHH
Q 019722          197 KSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVH-PGIVRTRLTREREGFITDLVFFLT----SKLLKTIPQG  271 (336)
Q Consensus       197 ~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~-PG~v~T~~~~~~~~~~~~~~~~~~----~~~~~~~~~~  271 (336)
                          .....|..+|...+...++..         +.-..+. ++++....................    .......++.
T Consensus       113 ----~~~~~~~~~~~~~e~~l~~sg---------~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~  179 (275)
T COG0702         113 ----ASPSALARAKAAVEAALRSSG---------IPYTTLRRAAFYLGAGAAFIEAAEAAGLPVIPRGIGRLSPIAVDDV  179 (275)
T ss_pred             ----CCccHHHHHHHHHHHHHHhcC---------CCeEEEecCeeeeccchhHHHHHHhhCCceecCCCCceeeeEHHHH
Confidence                233468888888887665533         4433444 333322111100000000000000    1122345777


Q ss_pred             HHHHHHHHhcCccccCCceeeccCcc
Q 019722          272 AATTCYVAIHPRLVNVSGKYFADCNE  297 (336)
Q Consensus       272 a~~~~~l~~~~~~~~~~G~~~~~~~~  297 (336)
                      +..+...+..+.   ..|+.+...+.
T Consensus       180 a~~~~~~l~~~~---~~~~~~~l~g~  202 (275)
T COG0702         180 AEALAAALDAPA---TAGRTYELAGP  202 (275)
T ss_pred             HHHHHHHhcCCc---ccCcEEEccCC
Confidence            777777776554   35666666665

>PRK06732 phosphopantothenate--cysteine ligase; Validated

Probab=98.36  E-value=2.3e-06  Score=75.08  Aligned_cols=98  Identities=12%  Similarity=0.180  Sum_probs=63.5

Q ss_pred             CEEEEeCCCCh-HHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCCC
Q 019722           36 VTAIITGATSG-IGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLP  114 (336)
Q Consensus        36 k~~lItGgs~g-IG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  114 (336)
                      .+-.||+.++| +|+++|++|+++|++|++++|+...        .. .+..++.++.++  +..+   ..+.+.+.++.
T Consensus        16 ~VR~itN~SSG~iG~aLA~~L~~~G~~V~li~r~~~~--------~~-~~~~~v~~i~v~--s~~~---m~~~l~~~~~~   81 (229)
T PRK06732         16 SVRGITNHSTGQLGKIIAETFLAAGHEVTLVTTKTAV--------KP-EPHPNLSIIEIE--NVDD---LLETLEPLVKD   81 (229)
T ss_pred             CceeecCccchHHHHHHHHHHHhCCCEEEEEECcccc--------cC-CCCCCeEEEEEe--cHHH---HHHHHHHHhcC
Confidence            46677877765 9999999999999999999876421        00 012355665543  2222   23333333457


Q ss_pred             ccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHH
Q 019722          115 LNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGH  147 (336)
Q Consensus       115 id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~  147 (336)
                      +|++|||||+....  ...+.+++.+++++|....
T Consensus        82 ~DivIh~AAvsd~~~~~~~~~~~~~~~~~v~~~~~  116 (229)
T PRK06732         82 HDVLIHSMAVSDYTPVYMTDLEEVSASDNLNEFLT  116 (229)
T ss_pred             CCEEEeCCccCCceehhhhhhhhhhhhhhhhhhhc
Confidence            89999999986532  4456777888887765433

>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]

Probab=98.32  E-value=1.4e-06  Score=88.66  Aligned_cols=162  Identities=20%  Similarity=0.205  Sum_probs=125.5

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHH---HHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGA-RLVLPARSLKAAE---EAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~-~V~~~~r~~~~~~---~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      -.|.++|+||-||+|.+++.-|..+|+ .+++++|+.-+..   ...+.++..  +.++.+-..|++.....+.++++..
T Consensus      1767 peksYii~GGLGGFGLELaqWLi~RGar~lVLtSRsGirtGYQa~~vrrWr~~--GVqV~vsT~nitt~~ga~~Li~~s~ 1844 (2376)
T KOG1202|consen 1767 PEKSYIIVGGLGGFGLELAQWLIQRGARKLVLTSRSGIRTGYQALMVRRWRRR--GVQVQVSTSNITTAEGARGLIEESN 1844 (2376)
T ss_pred             ccceEEEeccccchhHHHHHHHHhcCceEEEEeccccchhhHHHHHHHHHHhc--CeEEEEecccchhhhhHHHHHHHhh
Confidence            358999999999999999999999999 6889999865432   334444444  5667777778888888888887654


Q ss_pred             hcCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcc
Q 019722          110 SLNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMI  187 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~  187 (336)
                      + .+.+..++|.|.+....  ++.+++++.+.-+-.+.++.+|-+.......+-       --.|.+||.....+     
T Consensus      1845 k-l~~vGGiFnLA~VLRD~LiEnQt~knFk~va~pK~~~Ti~LD~~sRe~C~~L-------dyFv~FSSvscGRG----- 1911 (2376)
T KOG1202|consen 1845 K-LGPVGGIFNLAAVLRDGLIENQTPKNFKDVAKPKYSGTINLDRVSREICPEL-------DYFVVFSSVSCGRG----- 1911 (2376)
T ss_pred             h-cccccchhhHHHHHHhhhhcccChhHHHhhhccceeeeeehhhhhhhhCccc-------ceEEEEEeecccCC-----
Confidence            4 57889999999877654  778999999999999999998877666554432       36778888776666     


Q ss_pred             cccccccCCCCCCChhhHhHHHHHHHHHHHHHHHH
Q 019722          188 RYLGQISRNKSHYDATRAYALSKLANVLHTKELAQ  222 (336)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~  222 (336)
                                  ..++..|+.+..+++.++..-..
T Consensus      1912 ------------N~GQtNYG~aNS~MERiceqRr~ 1934 (2376)
T KOG1202|consen 1912 ------------NAGQTNYGLANSAMERICEQRRH 1934 (2376)
T ss_pred             ------------CCcccccchhhHHHHHHHHHhhh
Confidence                        56777899999999998876443

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=98.21  E-value=8.5e-05  Score=61.43  Aligned_cols=159  Identities=15%  Similarity=0.154  Sum_probs=104.3

Q ss_pred             EEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCCCcc
Q 019722           37 TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLPLN  116 (336)
Q Consensus        37 ~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id  116 (336)
                      .+-|.||||-.|..|+++..++|+.|..+.||+++....          ..+.+++.|+.+++++...+.       +.|
T Consensus         2 KIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~----------~~~~i~q~Difd~~~~a~~l~-------g~D   64 (211)
T COG2910           2 KIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAAR----------QGVTILQKDIFDLTSLASDLA-------GHD   64 (211)
T ss_pred             eEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhcccc----------ccceeecccccChhhhHhhhc-------CCc
Confidence            467889999999999999999999999999998876431          367789999999999866654       789


Q ss_pred             EEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcccccccccCC
Q 019722          117 LLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRN  196 (336)
Q Consensus       117 ~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~~~~~~  196 (336)
                      +||..-|...+      +..+.+.        ...+++...++.+.     ..|+++|+..++..-.+. -.+.|.   +
T Consensus        65 aVIsA~~~~~~------~~~~~~~--------k~~~~li~~l~~ag-----v~RllVVGGAGSL~id~g-~rLvD~---p  121 (211)
T COG2910          65 AVISAFGAGAS------DNDELHS--------KSIEALIEALKGAG-----VPRLLVVGGAGSLEIDEG-TRLVDT---P  121 (211)
T ss_pred             eEEEeccCCCC------ChhHHHH--------HHHHHHHHHHhhcC-----CeeEEEEcCccceEEcCC-ceeecC---C
Confidence            99988876422      1111111        12556666666544     479999998876654333 111111   1


Q ss_pred             CCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCC
Q 019722          197 KSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTR  244 (336)
Q Consensus       197 ~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~  244 (336)
                      .  +| -.-|..+++..+. ...|..+   ..  +.-.-|+|....-|
T Consensus       122 ~--fP-~ey~~~A~~~ae~-L~~Lr~~---~~--l~WTfvSPaa~f~P  160 (211)
T COG2910         122 D--FP-AEYKPEALAQAEF-LDSLRAE---KS--LDWTFVSPAAFFEP  160 (211)
T ss_pred             C--Cc-hhHHHHHHHHHHH-HHHHhhc---cC--cceEEeCcHHhcCC
Confidence            1  22 2235555554443 3444433   22  77888888877655

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=98.19  E-value=9.8e-06  Score=75.63  Aligned_cols=77  Identities=23%  Similarity=0.485  Sum_probs=66.4

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHCC-CEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCCC
Q 019722           36 VTAIITGATSGIGAETARVLAKRG-ARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLP  114 (336)
Q Consensus        36 k~~lItGgs~gIG~aia~~L~~~G-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  114 (336)
                      +.+||.|+ |+||+.+|..|+++| .+|++.+|+.++..++.+..     +.++.+.++|+.+.+.+.++++.       
T Consensus         2 ~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~-----~~~v~~~~vD~~d~~al~~li~~-------   68 (389)
T COG1748           2 MKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELI-----GGKVEALQVDAADVDALVALIKD-------   68 (389)
T ss_pred             CcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhc-----cccceeEEecccChHHHHHHHhc-------
Confidence            57889998 999999999999999 79999999999888776654     34899999999999999888873       


Q ss_pred             ccEEEEcccCC
Q 019722          115 LNLLINNAGKF  125 (336)
Q Consensus       115 id~lv~nAg~~  125 (336)
                      .|++|+++...
T Consensus        69 ~d~VIn~~p~~   79 (389)
T COG1748          69 FDLVINAAPPF   79 (389)
T ss_pred             CCEEEEeCCch
Confidence            49999998743

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=98.18  E-value=2.3e-05  Score=62.89  Aligned_cols=80  Identities=23%  Similarity=0.373  Sum_probs=61.2

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGA-RLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      .++++++++|.|+ ||.|++++..|++.|+ +|.++.|+.++++++.+.+.    +..+.++..+  +   +.....   
T Consensus         8 ~~l~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~----~~~~~~~~~~--~---~~~~~~---   74 (135)
T PF01488_consen    8 GDLKGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAEALAEEFG----GVNIEAIPLE--D---LEEALQ---   74 (135)
T ss_dssp             STGTTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHT----GCSEEEEEGG--G---HCHHHH---
T ss_pred             CCcCCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcC----ccccceeeHH--H---HHHHHh---
Confidence            3789999999996 9999999999999998 59999999999998888772    3456666532  2   223332   


Q ss_pred             hcCCCccEEEEcccCCCC
Q 019722          110 SLNLPLNLLINNAGKFAH  127 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~~  127 (336)
                          ..|++|++.+....
T Consensus        75 ----~~DivI~aT~~~~~   88 (135)
T PF01488_consen   75 ----EADIVINATPSGMP   88 (135)
T ss_dssp             ----TESEEEE-SSTTST
T ss_pred             ----hCCeEEEecCCCCc
Confidence                57999999886543

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=98.08  E-value=1.8e-05  Score=75.10  Aligned_cols=76  Identities=28%  Similarity=0.521  Sum_probs=61.0

Q ss_pred             EEEeCCCChHHHHHHHHHHHCCC--EEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCCCc
Q 019722           38 AIITGATSGIGAETARVLAKRGA--RLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLPL  115 (336)
Q Consensus        38 ~lItGgs~gIG~aia~~L~~~G~--~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i  115 (336)
                      ++|.|| |.+|+.+++.|++++-  +|++.+|+.+++++..+++    ...++.++++|+.|.+++.++++       ..
T Consensus         1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~----~~~~~~~~~~d~~~~~~l~~~~~-------~~   68 (386)
T PF03435_consen    1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKL----LGDRVEAVQVDVNDPESLAELLR-------GC   68 (386)
T ss_dssp             EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT------TTTTEEEEE--TTTHHHHHHHHT-------TS
T ss_pred             CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhc----cccceeEEEEecCCHHHHHHHHh-------cC
Confidence            689999 9999999999999984  8999999999988887765    25799999999999999888876       45


Q ss_pred             cEEEEcccCC
Q 019722          116 NLLINNAGKF  125 (336)
Q Consensus       116 d~lv~nAg~~  125 (336)
                      |++||++|..
T Consensus        69 dvVin~~gp~   78 (386)
T PF03435_consen   69 DVVINCAGPF   78 (386)
T ss_dssp             SEEEE-SSGG
T ss_pred             CEEEECCccc
Confidence            9999999965

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=98.05  E-value=2.2e-05  Score=76.02  Aligned_cols=79  Identities=20%  Similarity=0.258  Sum_probs=60.3

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCCh-HHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSL-KAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~-~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      |++++|+++|+|+++ +|.++|+.|+++|++|++++++. +..++..+++.+    ..+.++..|..+            
T Consensus         1 ~~~~~k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~~----~~~~~~~~~~~~------------   63 (450)
T PRK14106          1 MELKGKKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKEEDQLKEALEELGE----LGIELVLGEYPE------------   63 (450)
T ss_pred             CCcCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHh----cCCEEEeCCcch------------
Confidence            368899999999877 99999999999999999999875 444444455533    245677778765            


Q ss_pred             hcCCCccEEEEcccCCC
Q 019722          110 SLNLPLNLLINNAGKFA  126 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~  126 (336)
                      +..+.+|+||+++|+..
T Consensus        64 ~~~~~~d~vv~~~g~~~   80 (450)
T PRK14106         64 EFLEGVDLVVVSPGVPL   80 (450)
T ss_pred             hHhhcCCEEEECCCCCC
Confidence            11246899999999753

>KOG2733 consensus Uncharacterized membrane protein [Function unknown]

Probab=98.00  E-value=2.6e-05  Score=70.64  Aligned_cols=84  Identities=20%  Similarity=0.284  Sum_probs=72.2

Q ss_pred             EEEEeCCCChHHHHHHHHHHH----CCCEEEEeeCChHHHHHHHHHHHhhCCC--CceEEEeccCCCHHHHHHHHHHHHh
Q 019722           37 TAIITGATSGIGAETARVLAK----RGARLVLPARSLKAAEEAKARLASDCPG--SDIVVLPLDLSSLSSVRNFVSQFHS  110 (336)
Q Consensus        37 ~~lItGgs~gIG~aia~~L~~----~G~~V~~~~r~~~~~~~~~~~l~~~~~~--~~~~~~~~Dl~~~~~v~~~~~~~~~  110 (336)
                      -++|-||||..|..++.++++    .|..+.+.+||++++++.++++.+..+.  .+..++.||.+|++++++++++.  
T Consensus         7 DvVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~i~i~D~~n~~Sl~emak~~--   84 (423)
T KOG2733|consen    7 DVVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSVILIADSANEASLDEMAKQA--   84 (423)
T ss_pred             eEEEEccccccceeeHHHHhhhhcccCceEEEecCCHHHHHHHHHHHhhccCCCcccceEEEecCCCHHHHHHHHhhh--
Confidence            479999999999999999999    7789999999999999999999887532  23448889999999999999854  


Q ss_pred             cCCCccEEEEcccCCCC
Q 019722          111 LNLPLNLLINNAGKFAH  127 (336)
Q Consensus       111 ~~~~id~lv~nAg~~~~  127 (336)
                           .+++||+|....
T Consensus        85 -----~vivN~vGPyR~   96 (423)
T KOG2733|consen   85 -----RVIVNCVGPYRF   96 (423)
T ss_pred             -----EEEEecccccee
Confidence                 699999996543

>PRK09620 hypothetical protein; Provisional

Probab=98.00  E-value=8.1e-06  Score=71.44  Aligned_cols=83  Identities=12%  Similarity=0.134  Sum_probs=51.5

Q ss_pred             CCCCEEEEeCCC----------------ChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCC
Q 019722           33 LSSVTAIITGAT----------------SGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLS   96 (336)
Q Consensus        33 l~gk~~lItGgs----------------~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~   96 (336)
                      |+||.+|||+|.                |.+|.++|++|+++|++|+++++.......   .+   .+...+..+..|. 
T Consensus         1 l~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~~~~~~~---~~---~~~~~~~~V~s~~-   73 (229)
T PRK09620          1 MKGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGYFAEKPN---DI---NNQLELHPFEGII-   73 (229)
T ss_pred             CCCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCCCcCCCc---cc---CCceeEEEEecHH-
Confidence            579999999985                899999999999999999988754221110   00   0012333444322 


Q ss_pred             CHHHHHHHHHHHHhcCCCccEEEEcccCCC
Q 019722           97 SLSSVRNFVSQFHSLNLPLNLLINNAGKFA  126 (336)
Q Consensus        97 ~~~~v~~~~~~~~~~~~~id~lv~nAg~~~  126 (336)
                         ++...++++.+. ..+|++||+|++..
T Consensus        74 ---d~~~~l~~~~~~-~~~D~VIH~AAvsD   99 (229)
T PRK09620         74 ---DLQDKMKSIITH-EKVDAVIMAAAGSD   99 (229)
T ss_pred             ---HHHHHHHHHhcc-cCCCEEEECccccc
Confidence               222223332221 25899999999743

>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]

Probab=98.00  E-value=9.2e-05  Score=63.15  Aligned_cols=162  Identities=15%  Similarity=0.118  Sum_probs=99.1

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHCCC---EEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcC
Q 019722           36 VTAIITGATSGIGAETARVLAKRGA---RLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLN  112 (336)
Q Consensus        36 k~~lItGgs~gIG~aia~~L~~~G~---~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  112 (336)
                      ++++||||+|-+|+||.+.+.++|.   +.++.+.                       -.+|+++..+++++++..    
T Consensus         2 ~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~~s-----------------------kd~DLt~~a~t~~lF~~e----   54 (315)
T KOG1431|consen    2 KKILVTGGTGLVGSAIVKVVQEQGFDDENWVFIGS-----------------------KDADLTNLADTRALFESE----   54 (315)
T ss_pred             ceEEEecCCchHHHHHHHHHHhcCCCCcceEEecc-----------------------ccccccchHHHHHHHhcc----
Confidence            6899999999999999999999985   2333222                       247999999999999854    


Q ss_pred             CCccEEEEcccCCCCC---CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcccc
Q 019722          113 LPLNLLINNAGKFAHQ---HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRY  189 (336)
Q Consensus       113 ~~id~lv~nAg~~~~~---~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~  189 (336)
                       ++-.+|+.|+..+..   ...+.+    .+..|+.=.-.+++.+...-.+         ++|+..|.. .++.....++
T Consensus        55 -kPthVIhlAAmVGGlf~N~~ynld----F~r~Nl~indNVlhsa~e~gv~---------K~vsclStC-IfPdkt~yPI  119 (315)
T KOG1431|consen   55 -KPTHVIHLAAMVGGLFHNNTYNLD----FIRKNLQINDNVLHSAHEHGVK---------KVVSCLSTC-IFPDKTSYPI  119 (315)
T ss_pred             -CCceeeehHhhhcchhhcCCCchH----HHhhcceechhHHHHHHHhchh---------hhhhhccee-ecCCCCCCCC
Confidence             677889998865543   222333    3333433334455555555433         344444432 2221112222


Q ss_pred             cccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCC
Q 019722          190 LGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTR  244 (336)
Q Consensus       190 ~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~  244 (336)
                      ++-..-+.-+.+....|+-+|..+.-..+..+.+.+     -...++.|-.+..|
T Consensus       120 dEtmvh~gpphpsN~gYsyAKr~idv~n~aY~~qhg-----~~~tsviPtNvfGp  169 (315)
T KOG1431|consen  120 DETMVHNGPPHPSNFGYSYAKRMIDVQNQAYRQQHG-----RDYTSVIPTNVFGP  169 (315)
T ss_pred             CHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHhC-----CceeeeccccccCC
Confidence            221111112256677899999888877788877765     45566666666555

>PLN00106 malate dehydrogenase

Probab=97.92  E-value=7.5e-05  Score=68.69  Aligned_cols=162  Identities=14%  Similarity=0.088  Sum_probs=95.4

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHCCC--EEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCC
Q 019722           36 VTAIITGATSGIGAETARVLAKRGA--RLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNL  113 (336)
Q Consensus        36 k~~lItGgs~gIG~aia~~L~~~G~--~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  113 (336)
                      +++.|||++|.+|.+++..|+.++.  ++++++.++  ++-....+....  ...  ...++++.+++...+       .
T Consensus        19 ~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~--~~g~a~Dl~~~~--~~~--~i~~~~~~~d~~~~l-------~   85 (323)
T PLN00106         19 FKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIAN--TPGVAADVSHIN--TPA--QVRGFLGDDQLGDAL-------K   85 (323)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCC--CCeeEchhhhCC--cCc--eEEEEeCCCCHHHHc-------C
Confidence            6899999999999999999998775  799999887  221122222211  111  222333333333333       3


Q ss_pred             CccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcccccccc
Q 019722          114 PLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQI  193 (336)
Q Consensus       114 ~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~~~  193 (336)
                      ..|++|+.||....+    ...+++.+..|+...    +.+.+.+.+...    .+.++++|.+.-...+.  ..+   .
T Consensus        86 ~aDiVVitAG~~~~~----g~~R~dll~~N~~i~----~~i~~~i~~~~p----~aivivvSNPvD~~~~i--~t~---~  148 (323)
T PLN00106         86 GADLVIIPAGVPRKP----GMTRDDLFNINAGIV----KTLCEAVAKHCP----NALVNIISNPVNSTVPI--AAE---V  148 (323)
T ss_pred             CCCEEEEeCCCCCCC----CCCHHHHHHHHHHHH----HHHHHHHHHHCC----CeEEEEeCCCccccHHH--HHH---H
Confidence            789999999985432    234677777777664    444455544431    34555555554310000  000   0


Q ss_pred             cCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccC
Q 019722          194 SRNKSHYDATRAYALSKLANVLHTKELAQRLKQM  227 (336)
Q Consensus       194 ~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~  227 (336)
                      ......++....|+.++.-...|-..++.++.-.
T Consensus       149 ~~~~s~~p~~~viG~~~LDs~Rl~~~lA~~lgv~  182 (323)
T PLN00106        149 LKKAGVYDPKKLFGVTTLDVVRANTFVAEKKGLD  182 (323)
T ss_pred             HHHcCCCCcceEEEEecchHHHHHHHHHHHhCCC
Confidence            0011225566678888877778888888888754

>PRK14982 acyl-ACP reductase; Provisional

Probab=97.86  E-value=0.00011  Score=67.92  Aligned_cols=74  Identities=28%  Similarity=0.342  Sum_probs=55.0

Q ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHC-C-CEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           32 NLSSVTAIITGATSGIGAETARVLAKR-G-ARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        32 ~l~gk~~lItGgs~gIG~aia~~L~~~-G-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      ++++|+++||||+|.||+.++++|+++ | .+|+++.|+.+++..+..++..           .|+.   ++..+     
T Consensus       152 ~l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~~-----------~~i~---~l~~~-----  212 (340)
T PRK14982        152 DLSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELGG-----------GKIL---SLEEA-----  212 (340)
T ss_pred             CcCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhcc-----------ccHH---hHHHH-----
Confidence            689999999999999999999999865 6 4899999998877766554321           1221   22222     


Q ss_pred             hcCCCccEEEEcccCCC
Q 019722          110 SLNLPLNLLINNAGKFA  126 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~  126 (336)
                        ....|++|++++...
T Consensus       213 --l~~aDiVv~~ts~~~  227 (340)
T PRK14982        213 --LPEADIVVWVASMPK  227 (340)
T ss_pred             --HccCCEEEECCcCCc
Confidence              236899999998654

>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]

Probab=97.83  E-value=5.9e-05  Score=61.88  Aligned_cols=162  Identities=17%  Similarity=0.103  Sum_probs=98.7

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCC--EEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHH
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGA--RLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQF  108 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~--~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~  108 (336)
                      +.|.++.++|.||||-.|..+.+++++.+-  +|+++.|+...... .        +..+.....|.+..++...-+   
T Consensus        14 f~mq~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~d~a-t--------~k~v~q~~vDf~Kl~~~a~~~---   81 (238)
T KOG4039|consen   14 FRMQNMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRRELPDPA-T--------DKVVAQVEVDFSKLSQLATNE---   81 (238)
T ss_pred             HhhhccceEEEeccccccHHHHHHHHhcccceeEEEEEeccCCCcc-c--------cceeeeEEechHHHHHHHhhh---
Confidence            347888999999999999999999999983  89999988521111 1        456777778887666554433   


Q ss_pred             HhcCCCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccc
Q 019722          109 HSLNLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIR  188 (336)
Q Consensus       109 ~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~  188 (336)
                          .++|+++++-|.......  .++   .+.+.---.+.+.|++-    +.+     ...++.+||..+.-       
T Consensus        82 ----qg~dV~FcaLgTTRgkaG--adg---fykvDhDyvl~~A~~AK----e~G-----ck~fvLvSS~GAd~-------  136 (238)
T KOG4039|consen   82 ----QGPDVLFCALGTTRGKAG--ADG---FYKVDHDYVLQLAQAAK----EKG-----CKTFVLVSSAGADP-------  136 (238)
T ss_pred             ----cCCceEEEeecccccccc--cCc---eEeechHHHHHHHHHHH----hCC-----CeEEEEEeccCCCc-------
Confidence                389999999986543311  111   11111111122222222    222     35899999976542       


Q ss_pred             ccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCcc
Q 019722          189 YLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRER  249 (336)
Q Consensus       189 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~  249 (336)
                                  .+...|-..|--++.-+-.|-        .=++..+.||++..+....-
T Consensus       137 ------------sSrFlY~k~KGEvE~~v~eL~--------F~~~~i~RPG~ll~~R~esr  177 (238)
T KOG4039|consen  137 ------------SSRFLYMKMKGEVERDVIELD--------FKHIIILRPGPLLGERTESR  177 (238)
T ss_pred             ------------ccceeeeeccchhhhhhhhcc--------ccEEEEecCcceeccccccc
Confidence                        223345555544443222221        14788899999976655543

>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]

Probab=97.80  E-value=4.5e-05  Score=65.80  Aligned_cols=184  Identities=17%  Similarity=0.126  Sum_probs=116.0

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhh------CCCCceEEEeccCCCHHHHHHHHHHH
Q 019722           35 SVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASD------CPGSDIVVLPLDLSSLSSVRNFVSQF  108 (336)
Q Consensus        35 gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~------~~~~~~~~~~~Dl~~~~~v~~~~~~~  108 (336)
                      +|++||||=+|-=|..++.-|+.+|+.|.-+-|..+....  ..++..      +.+......-.|++|...+.+++..+
T Consensus        28 rkvALITGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT--~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~~i  105 (376)
T KOG1372|consen   28 RKVALITGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNT--ARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLISTI  105 (376)
T ss_pred             ceEEEEecccCCCchHHHHHHHhCCceeeEEEeeccccch--hhhhhhhcCchhcccceeEEeeccccchHHHHHHHhcc
Confidence            4699999999999999999999999999988776554332  122222      22456777889999999999999876


Q ss_pred             HhcCCCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccc
Q 019722          109 HSLNLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIR  188 (336)
Q Consensus       109 ~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~  188 (336)
                           +++-+.|.|+-.+-.  .+.+-.+-+-+|...|++.|+.+....-...+      -| ..-.|..-.++-.    
T Consensus       106 -----kPtEiYnLaAQSHVk--vSFdlpeYTAeVdavGtLRlLdAi~~c~l~~~------Vr-fYQAstSElyGkv----  167 (376)
T KOG1372|consen  106 -----KPTEVYNLAAQSHVK--VSFDLPEYTAEVDAVGTLRLLDAIRACRLTEK------VR-FYQASTSELYGKV----  167 (376)
T ss_pred             -----CchhhhhhhhhcceE--EEeecccceeeccchhhhhHHHHHHhcCcccc------ee-EEecccHhhcccc----
Confidence                 456666666643322  12222234556677788888877766543321      22 3333333333211    


Q ss_pred             ccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCC-CcEEEEEeeCC
Q 019722          189 YLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQME-ANVTVNCVHPG  239 (336)
Q Consensus       189 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g-~~I~vn~v~PG  239 (336)
                       ...+..+..++-+..+|+++|......+-..+..+.-.. .+|-+|.=+|-
T Consensus       168 -~e~PQsE~TPFyPRSPYa~aKmy~~WivvNyREAYnmfAcNGILFNHESPR  218 (376)
T KOG1372|consen  168 -QEIPQSETTPFYPRSPYAAAKMYGYWIVVNYREAYNMFACNGILFNHESPR  218 (376)
T ss_pred             -cCCCcccCCCCCCCChhHHhhhhheEEEEEhHHhhcceeeccEeecCCCCc
Confidence             122333445677888999999877766555554443321 13777777664

>PTZ00325 malate dehydrogenase; Provisional

Probab=97.73  E-value=0.00037  Score=64.08  Aligned_cols=161  Identities=19%  Similarity=0.144  Sum_probs=91.6

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCC--CEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHh
Q 019722           33 LSSVTAIITGATSGIGAETARVLAKRG--ARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHS  110 (336)
Q Consensus        33 l~gk~~lItGgs~gIG~aia~~L~~~G--~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  110 (336)
                      ++.+++.|+|++|.||..++..|+.++  .++++++++.  ++-....+....  ..  +...+.+++.+..+.++    
T Consensus         6 ~~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~~--~~g~a~Dl~~~~--~~--~~v~~~td~~~~~~~l~----   75 (321)
T PTZ00325          6 LKMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIVG--APGVAADLSHID--TP--AKVTGYADGELWEKALR----   75 (321)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecCC--CcccccchhhcC--cC--ceEEEecCCCchHHHhC----
Confidence            566799999999999999999999766  4899999932  222122332211  12  22335555444333332    


Q ss_pred             cCCCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCC-ccccccCCcccc
Q 019722          111 LNLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSS-IHSWFSGDMIRY  189 (336)
Q Consensus       111 ~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~-~~~~~~~~~~~~  189 (336)
                         ..|++|++||....+    .+.+.+.+..|+...-.    +.+.+++..     ..++|+++|. .....      +
T Consensus        76 ---gaDvVVitaG~~~~~----~~tR~dll~~N~~i~~~----i~~~i~~~~-----~~~iviv~SNPvdv~~------~  133 (321)
T PTZ00325         76 ---GADLVLICAGVPRKP----GMTRDDLFNTNAPIVRD----LVAAVASSA-----PKAIVGIVSNPVNSTV------P  133 (321)
T ss_pred             ---CCCEEEECCCCCCCC----CCCHHHHHHHHHHHHHH----HHHHHHHHC-----CCeEEEEecCcHHHHH------H
Confidence               689999999975332    23466777777765544    445555443     3467777664 22211      0


Q ss_pred             ccc-ccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHc
Q 019722          190 LGQ-ISRNKSHYDATRAYALSKLANVLHTKELAQRLK  225 (336)
Q Consensus       190 ~~~-~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~  225 (336)
                      ... .-.....++....|+.+-.=-..|-..++.++.
T Consensus       134 ~~~~~~~~~sg~p~~~viG~g~LDs~R~r~~la~~l~  170 (321)
T PTZ00325        134 IAAETLKKAGVYDPRKLFGVTTLDVVRARKFVAEALG  170 (321)
T ss_pred             HHHhhhhhccCCChhheeechhHHHHHHHHHHHHHhC
Confidence            000 000112256666788863222355666666665

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=97.61  E-value=0.00043  Score=56.60  Aligned_cols=77  Identities=25%  Similarity=0.342  Sum_probs=56.5

Q ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCC-CEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHh
Q 019722           32 NLSSVTAIITGATSGIGAETARVLAKRG-ARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHS  110 (336)
Q Consensus        32 ~l~gk~~lItGgs~gIG~aia~~L~~~G-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  110 (336)
                      ++++++++|+|+ |++|.++++.|++.| .+|++++|+.++.++..+++...    .   +..+..+..++         
T Consensus        16 ~~~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~----~---~~~~~~~~~~~---------   78 (155)
T cd01065          16 ELKGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGEL----G---IAIAYLDLEEL---------   78 (155)
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhc----c---cceeecchhhc---------
Confidence            467899999997 899999999999996 68999999998887776665321    0   22233333322         


Q ss_pred             cCCCccEEEEcccCCC
Q 019722          111 LNLPLNLLINNAGKFA  126 (336)
Q Consensus       111 ~~~~id~lv~nAg~~~  126 (336)
                       ....|++|++.+...
T Consensus        79 -~~~~Dvvi~~~~~~~   93 (155)
T cd01065          79 -LAEADLIINTTPVGM   93 (155)
T ss_pred             -cccCCEEEeCcCCCC
Confidence             236899999997644

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism

Probab=97.60  E-value=0.00048  Score=58.22  Aligned_cols=78  Identities=21%  Similarity=0.247  Sum_probs=49.7

Q ss_pred             CCCCEEEEeCC----------------CChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCC
Q 019722           33 LSSVTAIITGA----------------TSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLS   96 (336)
Q Consensus        33 l~gk~~lItGg----------------s~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~   96 (336)
                      |+||.+|||+|                ||-.|.++|+++..+|++|+++..... ...          +..+..+.  +.
T Consensus         1 l~gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~Ga~V~li~g~~~-~~~----------p~~~~~i~--v~   67 (185)
T PF04127_consen    1 LKGKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRGAEVTLIHGPSS-LPP----------PPGVKVIR--VE   67 (185)
T ss_dssp             -TT-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT-EEEEEE-TTS---------------TTEEEEE---S
T ss_pred             CCCCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCCCEEEEEecCcc-ccc----------cccceEEE--ec
Confidence            57999999998                678999999999999999999887632 111          23566665  55


Q ss_pred             CHHHHHHHHHHHHhcCCCccEEEEcccCCC
Q 019722           97 SLSSVRNFVSQFHSLNLPLNLLINNAGKFA  126 (336)
Q Consensus        97 ~~~~v~~~~~~~~~~~~~id~lv~nAg~~~  126 (336)
                      +.++....+.+..   ..-|++|++|++..
T Consensus        68 sa~em~~~~~~~~---~~~Di~I~aAAVsD   94 (185)
T PF04127_consen   68 SAEEMLEAVKELL---PSADIIIMAAAVSD   94 (185)
T ss_dssp             SHHHHHHHHHHHG---GGGSEEEE-SB--S
T ss_pred             chhhhhhhhcccc---CcceeEEEecchhh
Confidence            5566655555443   34499999999754

These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.

>KOG2774 consensus NAD dependent epimerase [General function prediction only]

Probab=97.59  E-value=0.00067  Score=58.31  Aligned_cols=172  Identities=18%  Similarity=0.236  Sum_probs=108.1

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHC-CC-EEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHh
Q 019722           33 LSSVTAIITGATSGIGAETARVLAKR-GA-RLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHS  110 (336)
Q Consensus        33 l~gk~~lItGgs~gIG~aia~~L~~~-G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  110 (336)
                      -+-..+|||||-|-+|..+|+.|-.+ |. +|++-+-.... +...         ..--++-.|+-|...+++++-    
T Consensus        42 ~~~PrvLITG~LGQLG~~~A~LLR~~yGs~~VILSDI~KPp-~~V~---------~~GPyIy~DILD~K~L~eIVV----  107 (366)
T KOG2774|consen   42 QKAPRVLITGSLGQLGRGLASLLRYMYGSECVILSDIVKPP-ANVT---------DVGPYIYLDILDQKSLEEIVV----  107 (366)
T ss_pred             CCCCeEEEecchHHHhHHHHHHHHHHhCCccEehhhccCCc-hhhc---------ccCCchhhhhhccccHHHhhc----
Confidence            34458999999999999999988765 65 56654422211 1111         112345567777777766543    


Q ss_pred             cCCCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccccc
Q 019722          111 LNLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYL  190 (336)
Q Consensus       111 ~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~  190 (336)
                       ..+||-+||-.+....   ..+.+..-..+||+.|.-.+++.+..+           .--||+-|..|..++.+.    
T Consensus       108 -n~RIdWL~HfSALLSA---vGE~NVpLA~~VNI~GvHNil~vAa~~-----------kL~iFVPSTIGAFGPtSP----  168 (366)
T KOG2774|consen  108 -NKRIDWLVHFSALLSA---VGETNVPLALQVNIRGVHNILQVAAKH-----------KLKVFVPSTIGAFGPTSP----  168 (366)
T ss_pred             -ccccceeeeHHHHHHH---hcccCCceeeeecchhhhHHHHHHHHc-----------CeeEeecccccccCCCCC----
Confidence             2489999998764332   234445567789999999888877664           234667666555543210    


Q ss_pred             ccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEe-eCCcee
Q 019722          191 GQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCV-HPGIVR  242 (336)
Q Consensus       191 ~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v-~PG~v~  242 (336)
                      .++-++..-..+...|+.||.-.+.+-..+...++     +.+-++ -||.+.
T Consensus       169 RNPTPdltIQRPRTIYGVSKVHAEL~GEy~~hrFg-----~dfr~~rfPg~is  216 (366)
T KOG2774|consen  169 RNPTPDLTIQRPRTIYGVSKVHAELLGEYFNHRFG-----VDFRSMRFPGIIS  216 (366)
T ss_pred             CCCCCCeeeecCceeechhHHHHHHHHHHHHhhcC-----ccceecccCcccc
Confidence            11222223345677899999999988888877765     444444 355553

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=97.58  E-value=0.0013  Score=59.88  Aligned_cols=79  Identities=16%  Similarity=0.290  Sum_probs=55.8

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCC
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNL  113 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  113 (336)
                      .|++++|+|+++++|.++++.+...|.+|++++++.++.+.+ ..+     +..   ..+|..+.+....+.+...  ..
T Consensus       144 ~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~-----g~~---~~~~~~~~~~~~~~~~~~~--~~  212 (325)
T cd08253         144 AGETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGAELV-RQA-----GAD---AVFNYRAEDLADRILAATA--GQ  212 (325)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHc-----CCC---EEEeCCCcCHHHHHHHHcC--CC
Confidence            579999999999999999999999999999999988765544 222     221   1134444444444433322  23


Q ss_pred             CccEEEEccc
Q 019722          114 PLNLLINNAG  123 (336)
Q Consensus       114 ~id~lv~nAg  123 (336)
                      ++|++++++|
T Consensus       213 ~~d~vi~~~~  222 (325)
T cd08253         213 GVDVIIEVLA  222 (325)
T ss_pred             ceEEEEECCc
Confidence            6999999987

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=97.56  E-value=0.00066  Score=61.14  Aligned_cols=76  Identities=22%  Similarity=0.311  Sum_probs=56.3

Q ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhc
Q 019722           32 NLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSL  111 (336)
Q Consensus        32 ~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  111 (336)
                      ..++|+++|+|+ ||+|++++..|++.|++|.+++|+.++++++.+.+...   ..+.....|     ..         .
T Consensus       114 ~~~~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~---~~~~~~~~~-----~~---------~  175 (270)
T TIGR00507       114 LRPNQRVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKAEELAERFQRY---GEIQAFSMD-----EL---------P  175 (270)
T ss_pred             CccCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhc---CceEEechh-----hh---------c
Confidence            456899999998 69999999999999999999999998888877776432   122222211     10         1


Q ss_pred             CCCccEEEEcccCC
Q 019722          112 NLPLNLLINNAGKF  125 (336)
Q Consensus       112 ~~~id~lv~nAg~~  125 (336)
                      ....|++|++.+..
T Consensus       176 ~~~~DivInatp~g  189 (270)
T TIGR00507       176 LHRVDLIINATSAG  189 (270)
T ss_pred             ccCccEEEECCCCC
Confidence            23589999999864

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases

Probab=97.52  E-value=0.00089  Score=61.88  Aligned_cols=119  Identities=13%  Similarity=0.051  Sum_probs=69.4

Q ss_pred             EEEEeCCCChHHHHHHHHHHHCC-------CEEEEeeCChHH--HHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHH
Q 019722           37 TAIITGATSGIGAETARVLAKRG-------ARLVLPARSLKA--AEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQ  107 (336)
Q Consensus        37 ~~lItGgs~gIG~aia~~L~~~G-------~~V~~~~r~~~~--~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~  107 (336)
                      .++||||+|.+|.+++..|+.++       .+|+++++++..  ++.....+.    +... ....|+....++.+.   
T Consensus         4 kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~Dl~----d~~~-~~~~~~~~~~~~~~~---   75 (325)
T cd01336           4 RVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVMELQ----DCAF-PLLKSVVATTDPEEA---   75 (325)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceeeehh----hccc-cccCCceecCCHHHH---
Confidence            58999999999999999999855       489999996531  211111110    0000 111133222222222   


Q ss_pred             HHhcCCCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCc
Q 019722          108 FHSLNLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSI  178 (336)
Q Consensus       108 ~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~  178 (336)
                          +...|++|++||...... .+   -.+.+..|+    .+++...+.+.+..   .+.+.+|++|.+.
T Consensus        76 ----l~~aDiVI~tAG~~~~~~-~~---R~~l~~~N~----~i~~~i~~~i~~~~---~~~~iiivvsNPv  131 (325)
T cd01336          76 ----FKDVDVAILVGAMPRKEG-ME---RKDLLKANV----KIFKEQGEALDKYA---KKNVKVLVVGNPA  131 (325)
T ss_pred             ----hCCCCEEEEeCCcCCCCC-CC---HHHHHHHHH----HHHHHHHHHHHHhC---CCCeEEEEecCcH
Confidence                237899999999754321 12   244555554    46677777776652   1146788888754

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=97.52  E-value=0.00084  Score=62.34  Aligned_cols=83  Identities=24%  Similarity=0.412  Sum_probs=64.7

Q ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCCh---------------------HHHHHHHHHHHhhCCCCceE
Q 019722           32 NLSSVTAIITGATSGIGAETARVLAKRGA-RLVLPARSL---------------------KAAEEAKARLASDCPGSDIV   89 (336)
Q Consensus        32 ~l~gk~~lItGgs~gIG~aia~~L~~~G~-~V~~~~r~~---------------------~~~~~~~~~l~~~~~~~~~~   89 (336)
                      .+++++|+|.|+ ||+|.++++.|+..|. ++.+++++.                     .+++.+.+.+++.+|+.++.
T Consensus        21 ~L~~~~VlIiG~-GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp~v~i~   99 (338)
T PRK12475         21 KIREKHVLIVGA-GALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINSEVEIV   99 (338)
T ss_pred             hhcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCCCcEEE
Confidence            478899999995 8899999999999998 899998873                     35666777888888888888


Q ss_pred             EEeccCCCHHHHHHHHHHHHhcCCCccEEEEccc
Q 019722           90 VLPLDLSSLSSVRNFVSQFHSLNLPLNLLINNAG  123 (336)
Q Consensus        90 ~~~~Dl~~~~~v~~~~~~~~~~~~~id~lv~nAg  123 (336)
                      .+..|++ .+.+..++       ...|++|.+..
T Consensus       100 ~~~~~~~-~~~~~~~~-------~~~DlVid~~D  125 (338)
T PRK12475        100 PVVTDVT-VEELEELV-------KEVDLIIDATD  125 (338)
T ss_pred             EEeccCC-HHHHHHHh-------cCCCEEEEcCC
Confidence            8888886 33444433       25798887663

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=97.51  E-value=0.0028  Score=58.32  Aligned_cols=79  Identities=24%  Similarity=0.363  Sum_probs=57.5

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCC
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNL  113 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  113 (336)
                      .+++++|+|+++++|.++++.+...|++|++++++.++.+.+ ..+     +..   ...|..+......+.+....  .
T Consensus       166 ~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~-----~~~---~~~~~~~~~~~~~~~~~~~~--~  234 (342)
T cd08266         166 PGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERA-KEL-----GAD---YVIDYRKEDFVREVRELTGK--R  234 (342)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHc-----CCC---eEEecCChHHHHHHHHHhCC--C
Confidence            578999999999999999999999999999999988765543 221     222   12355555555555543322  3


Q ss_pred             CccEEEEccc
Q 019722          114 PLNLLINNAG  123 (336)
Q Consensus       114 ~id~lv~nAg  123 (336)
                      ++|++++++|
T Consensus       235 ~~d~~i~~~g  244 (342)
T cd08266         235 GVDVVVEHVG  244 (342)
T ss_pred             CCcEEEECCc
Confidence            6999999988

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.47  E-value=0.00028  Score=68.26  Aligned_cols=81  Identities=16%  Similarity=0.212  Sum_probs=55.1

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHh
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHS  110 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  110 (336)
                      |+++||+++|||+++ +|.++++.|+++|++|++.+++........+.++..    .+.+.....  ...+   ..    
T Consensus         1 ~~~~~k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~~~~~~~~~~l~~~----g~~~~~~~~--~~~~---~~----   66 (447)
T PRK02472          1 TEYQNKKVLVLGLAK-SGYAAAKLLHKLGANVTVNDGKPFSENPEAQELLEE----GIKVICGSH--PLEL---LD----   66 (447)
T ss_pred             CCcCCCEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCCCccchhHHHHHHhc----CCEEEeCCC--CHHH---hc----
Confidence            467899999999976 999999999999999999998764444444445432    233332221  1111   11    


Q ss_pred             cCCCccEEEEcccCCCC
Q 019722          111 LNLPLNLLINNAGKFAH  127 (336)
Q Consensus       111 ~~~~id~lv~nAg~~~~  127 (336)
                        ..+|++|+++|+...
T Consensus        67 --~~~d~vV~s~gi~~~   81 (447)
T PRK02472         67 --EDFDLMVKNPGIPYT   81 (447)
T ss_pred             --CcCCEEEECCCCCCC
Confidence              148999999997643

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=97.44  E-value=0.0013  Score=56.50  Aligned_cols=83  Identities=19%  Similarity=0.306  Sum_probs=63.4

Q ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCC-------------------hHHHHHHHHHHHhhCCCCceEEE
Q 019722           32 NLSSVTAIITGATSGIGAETARVLAKRGA-RLVLPARS-------------------LKAAEEAKARLASDCPGSDIVVL   91 (336)
Q Consensus        32 ~l~gk~~lItGgs~gIG~aia~~L~~~G~-~V~~~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~~   91 (336)
                      .+.+++++|.| .||+|.++++.|+..|. ++.+++++                   ..+++.+.+.+++.+|..++..+
T Consensus        18 kl~~~~VlviG-~GglGs~ia~~La~~Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~   96 (202)
T TIGR02356        18 RLLNSHVLIIG-AGGLGSPAALYLAGAGVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELNSDIQVTAL   96 (202)
T ss_pred             HhcCCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhCCCCEEEEe
Confidence            47889999998 78999999999999998 89999877                   35667777788888777777777


Q ss_pred             eccCCCHHHHHHHHHHHHhcCCCccEEEEccc
Q 019722           92 PLDLSSLSSVRNFVSQFHSLNLPLNLLINNAG  123 (336)
Q Consensus        92 ~~Dl~~~~~v~~~~~~~~~~~~~id~lv~nAg  123 (336)
                      ...+.. +.+..++       ...|++|.+..
T Consensus        97 ~~~i~~-~~~~~~~-------~~~D~Vi~~~d  120 (202)
T TIGR02356        97 KERVTA-ENLELLI-------NNVDLVLDCTD  120 (202)
T ss_pred             hhcCCH-HHHHHHH-------hCCCEEEECCC
Confidence            766643 3333333       26799887764

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E

Probab=97.35  E-value=0.0043  Score=54.41  Aligned_cols=84  Identities=17%  Similarity=0.284  Sum_probs=61.0

Q ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCCh-------------------HHHHHHHHHHHhhCCCCceEEE
Q 019722           32 NLSSVTAIITGATSGIGAETARVLAKRGA-RLVLPARSL-------------------KAAEEAKARLASDCPGSDIVVL   91 (336)
Q Consensus        32 ~l~gk~~lItGgs~gIG~aia~~L~~~G~-~V~~~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~   91 (336)
                      .|++++++|.| .||+|.++++.|+..|. ++++++.+.                   .+.+...+.+.+.+|..++..+
T Consensus         8 ~L~~~~VlVvG-~GGvGs~va~~Lar~GVg~i~LvD~D~V~~sNlnRq~~~~~~diG~~Kae~~~~~l~~inP~~~V~~~   86 (231)
T cd00755           8 KLRNAHVAVVG-LGGVGSWAAEALARSGVGKLTLIDFDVVCVSNLNRQIHALLSTVGKPKVEVMAERIRDINPECEVDAV   86 (231)
T ss_pred             HHhCCCEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCEECchhhcchhCcChhhCCCcHHHHHHHHHHHHCCCcEEEEe
Confidence            36778899997 78999999999999998 899887552                   3556667777777887888877


Q ss_pred             eccCCCHHHHHHHHHHHHhcCCCccEEEEccc
Q 019722           92 PLDLSSLSSVRNFVSQFHSLNLPLNLLINNAG  123 (336)
Q Consensus        92 ~~Dl~~~~~v~~~~~~~~~~~~~id~lv~nAg  123 (336)
                      ...++ ++....++      ....|++|.+..
T Consensus        87 ~~~i~-~~~~~~l~------~~~~D~VvdaiD  111 (231)
T cd00755          87 EEFLT-PDNSEDLL------GGDPDFVVDAID  111 (231)
T ss_pred             eeecC-HhHHHHHh------cCCCCEEEEcCC
Confidence            76665 33333332      125788887753

coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional

Probab=97.34  E-value=0.0027  Score=56.33  Aligned_cols=83  Identities=22%  Similarity=0.329  Sum_probs=61.7

Q ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCCh-------------------HHHHHHHHHHHhhCCCCceEEE
Q 019722           32 NLSSVTAIITGATSGIGAETARVLAKRGA-RLVLPARSL-------------------KAAEEAKARLASDCPGSDIVVL   91 (336)
Q Consensus        32 ~l~gk~~lItGgs~gIG~aia~~L~~~G~-~V~~~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~   91 (336)
                      .+++++|+|.|+ ||+|..+++.|+..|. ++.+++.+.                   .+++.+.+.+++.+|..++..+
T Consensus        29 ~L~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~Ka~~a~~~l~~lnp~v~i~~~  107 (245)
T PRK05690         29 KLKAARVLVVGL-GGLGCAASQYLAAAGVGTLTLVDFDTVSLSNLQRQVLHDDATIGQPKVESARAALARINPHIAIETI  107 (245)
T ss_pred             HhcCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEECcchhhhhhcCChhhCCChHHHHHHHHHHHHCCCCEEEEE
Confidence            478899999987 9999999999999997 888876541                   3556667778877777888888


Q ss_pred             eccCCCHHHHHHHHHHHHhcCCCccEEEEccc
Q 019722           92 PLDLSSLSSVRNFVSQFHSLNLPLNLLINNAG  123 (336)
Q Consensus        92 ~~Dl~~~~~v~~~~~~~~~~~~~id~lv~nAg  123 (336)
                      ...++ ++.+..++       ...|++|.+..
T Consensus       108 ~~~i~-~~~~~~~~-------~~~DiVi~~~D  131 (245)
T PRK05690        108 NARLD-DDELAALI-------AGHDLVLDCTD  131 (245)
T ss_pred             eccCC-HHHHHHHH-------hcCCEEEecCC
Confidence            77665 33333333       25788887763

>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []

Probab=97.32  E-value=0.0068  Score=48.93  Aligned_cols=115  Identities=21%  Similarity=0.218  Sum_probs=74.9

Q ss_pred             EEEEeCCCChHHHHHHHHHHHCCC--EEEEeeCChHHHHHHHHHHHhhCCC--CceEEEeccCCCHHHHHHHHHHHHhcC
Q 019722           37 TAIITGATSGIGAETARVLAKRGA--RLVLPARSLKAAEEAKARLASDCPG--SDIVVLPLDLSSLSSVRNFVSQFHSLN  112 (336)
Q Consensus        37 ~~lItGgs~gIG~aia~~L~~~G~--~V~~~~r~~~~~~~~~~~l~~~~~~--~~~~~~~~Dl~~~~~v~~~~~~~~~~~  112 (336)
                      .+.|+|++|.+|.+++..|+.++.  ++++++++++.++-....+......  ....+...|   .+           .+
T Consensus         2 KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~~~---~~-----------~~   67 (141)
T PF00056_consen    2 KVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITSGD---YE-----------AL   67 (141)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEESS---GG-----------GG
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhccccccccccc---cc-----------cc
Confidence            478999999999999999999985  7999999988777666666553211  223333222   11           12


Q ss_pred             CCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCC
Q 019722          113 LPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSS  177 (336)
Q Consensus       113 ~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~  177 (336)
                      ...|++|..||....+. .+   -.+.++.|    ..+++...+.+.+..    +.+.++.+|.+
T Consensus        68 ~~aDivvitag~~~~~g-~s---R~~ll~~N----~~i~~~~~~~i~~~~----p~~~vivvtNP  120 (141)
T PF00056_consen   68 KDADIVVITAGVPRKPG-MS---RLDLLEAN----AKIVKEIAKKIAKYA----PDAIVIVVTNP  120 (141)
T ss_dssp             TTESEEEETTSTSSSTT-SS---HHHHHHHH----HHHHHHHHHHHHHHS----TTSEEEE-SSS
T ss_pred             ccccEEEEecccccccc-cc---HHHHHHHh----HhHHHHHHHHHHHhC----CccEEEEeCCc
Confidence            36899999999754321 22   23344444    346667777776653    25777777765

L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=97.30  E-value=0.0026  Score=55.73  Aligned_cols=83  Identities=23%  Similarity=0.382  Sum_probs=62.7

Q ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCC-------------------hHHHHHHHHHHHhhCCCCceEEE
Q 019722           32 NLSSVTAIITGATSGIGAETARVLAKRGA-RLVLPARS-------------------LKAAEEAKARLASDCPGSDIVVL   91 (336)
Q Consensus        32 ~l~gk~~lItGgs~gIG~aia~~L~~~G~-~V~~~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~~   91 (336)
                      .+.+++++|.| .||+|.++++.|+..|. ++.+++.+                   ..+++.+.+.+++.+|..++..+
T Consensus        18 ~L~~~~VlivG-~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~i~~~   96 (228)
T cd00757          18 KLKNARVLVVG-AGGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINPDVEIEAY   96 (228)
T ss_pred             HHhCCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCCCCEEEEe
Confidence            46788999998 78999999999999998 78887533                   34667778888888877788888


Q ss_pred             eccCCCHHHHHHHHHHHHhcCCCccEEEEccc
Q 019722           92 PLDLSSLSSVRNFVSQFHSLNLPLNLLINNAG  123 (336)
Q Consensus        92 ~~Dl~~~~~v~~~~~~~~~~~~~id~lv~nAg  123 (336)
                      ..+++ .+.+..+++       ..|++|.+..
T Consensus        97 ~~~i~-~~~~~~~~~-------~~DvVi~~~d  120 (228)
T cd00757          97 NERLD-AENAEELIA-------GYDLVLDCTD  120 (228)
T ss_pred             cceeC-HHHHHHHHh-------CCCEEEEcCC
Confidence            77774 333333332       5899988765

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=97.27  E-value=0.0026  Score=59.16  Aligned_cols=82  Identities=22%  Similarity=0.400  Sum_probs=61.3

Q ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCCh---------------------HHHHHHHHHHHhhCCCCceE
Q 019722           32 NLSSVTAIITGATSGIGAETARVLAKRGA-RLVLPARSL---------------------KAAEEAKARLASDCPGSDIV   89 (336)
Q Consensus        32 ~l~gk~~lItGgs~gIG~aia~~L~~~G~-~V~~~~r~~---------------------~~~~~~~~~l~~~~~~~~~~   89 (336)
                      .|.+++|+|.|+ ||+|..+++.|+..|. +|.+++++.                     .+++.+.+.+++.+|..++.
T Consensus        21 ~L~~~~VlVvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~RQ~l~~~~dig~g~~Ka~aa~~~l~~inp~v~v~   99 (339)
T PRK07688         21 KLREKHVLIIGA-GALGTANAEMLVRAGVGKVTIVDRDYVEWSNLQRQQLYTESDVKNNLPKAVAAKKRLEEINSDVRVE   99 (339)
T ss_pred             HhcCCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCccCHHHcCccccccHHHhcCCCcHHHHHHHHHHHHCCCcEEE
Confidence            478899999996 8999999999999998 999998863                     34555566777676777788


Q ss_pred             EEeccCCCHHHHHHHHHHHHhcCCCccEEEEcc
Q 019722           90 VLPLDLSSLSSVRNFVSQFHSLNLPLNLLINNA  122 (336)
Q Consensus        90 ~~~~Dl~~~~~v~~~~~~~~~~~~~id~lv~nA  122 (336)
                      .+..+++ .+.+..+++       ..|++|.+.
T Consensus       100 ~~~~~~~-~~~~~~~~~-------~~DlVid~~  124 (339)
T PRK07688        100 AIVQDVT-AEELEELVT-------GVDLIIDAT  124 (339)
T ss_pred             EEeccCC-HHHHHHHHc-------CCCEEEEcC
Confidence            8877775 333333332       568888774

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=97.26  E-value=0.0037  Score=49.97  Aligned_cols=80  Identities=24%  Similarity=0.469  Sum_probs=61.7

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCC-------------------hHHHHHHHHHHHhhCCCCceEEEecc
Q 019722           35 SVTAIITGATSGIGAETARVLAKRGA-RLVLPARS-------------------LKAAEEAKARLASDCPGSDIVVLPLD   94 (336)
Q Consensus        35 gk~~lItGgs~gIG~aia~~L~~~G~-~V~~~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~~~~D   94 (336)
                      .++++|.| .|++|.++++.|+..|. ++.+++.+                   ..+.+.+.+.+++.+|..++..+..+
T Consensus         2 ~~~v~iiG-~G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~~   80 (135)
T PF00899_consen    2 NKRVLIIG-AGGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPEK   80 (135)
T ss_dssp             T-EEEEES-TSHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEESH
T ss_pred             CCEEEEEC-cCHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeecc
Confidence            46788887 78999999999999998 88887644                   23677788888888888999999988


Q ss_pred             CCCHHHHHHHHHHHHhcCCCccEEEEccc
Q 019722           95 LSSLSSVRNFVSQFHSLNLPLNLLINNAG  123 (336)
Q Consensus        95 l~~~~~v~~~~~~~~~~~~~id~lv~nAg  123 (336)
                      + +......+++       ..|++|.+..
T Consensus        81 ~-~~~~~~~~~~-------~~d~vi~~~d  101 (135)
T PF00899_consen   81 I-DEENIEELLK-------DYDIVIDCVD  101 (135)
T ss_dssp             C-SHHHHHHHHH-------TSSEEEEESS
T ss_pred             c-cccccccccc-------CCCEEEEecC
Confidence            8 3444555553       5799988754

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=97.25  E-value=0.0022  Score=58.18  Aligned_cols=52  Identities=25%  Similarity=0.301  Sum_probs=45.4

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhhC
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGA-RLVLPARSLKAAEEAKARLASDC   83 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~   83 (336)
                      .++.+|+++|.| +||.|++++..|++.|. +|++++|+.++++.+.+.+....
T Consensus       123 ~~~~~k~vlIlG-aGGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~~  175 (284)
T PRK12549        123 PDASLERVVQLG-AGGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNARF  175 (284)
T ss_pred             cCccCCEEEEEC-CcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhC
Confidence            456789999999 58899999999999998 89999999999998888876543

>PRK14027 quinate/shikimate dehydrogenase; Provisional

Probab=97.23  E-value=0.0038  Score=56.55  Aligned_cols=82  Identities=17%  Similarity=0.268  Sum_probs=57.3

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGA-RLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      .++++|+++|.|+ ||-|++++..|++.|+ +|+++.|+.++++.+.+.+...++...+.  ..+.   .......    
T Consensus       123 ~~~~~k~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~~~~~~~~~~~--~~~~---~~~~~~~----  192 (283)
T PRK14027        123 PNAKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVV--GVDA---RGIEDVI----  192 (283)
T ss_pred             cCcCCCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhccCcceEE--ecCH---hHHHHHH----
Confidence            3567899999995 9999999999999997 89999999999988887765433221121  1222   1221111    


Q ss_pred             hcCCCccEEEEcccCC
Q 019722          110 SLNLPLNLLINNAGKF  125 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~  125 (336)
                         ...|++||+..+.
T Consensus       193 ---~~~divINaTp~G  205 (283)
T PRK14027        193 ---AAADGVVNATPMG  205 (283)
T ss_pred             ---hhcCEEEEcCCCC
Confidence               2479999887643

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=97.22  E-value=0.00057  Score=58.64  Aligned_cols=48  Identities=23%  Similarity=0.304  Sum_probs=41.4

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKAR   78 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~   78 (336)
                      .-+++||+++|+|.+ .+|.++++.|.+.|++|++.+++.++.++..+.
T Consensus        23 ~~~l~gk~v~I~G~G-~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~   70 (200)
T cd01075          23 TDSLEGKTVAVQGLG-KVGYKLAEHLLEEGAKLIVADINEEAVARAAEL   70 (200)
T ss_pred             CCCCCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHH
Confidence            457899999999975 899999999999999999999998776665543

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase

Probab=97.21  E-value=0.0009  Score=65.98  Aligned_cols=48  Identities=27%  Similarity=0.418  Sum_probs=42.6

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHH
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARL   79 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l   79 (336)
                      .++++|+++|+|+ ||+|++++..|+++|++|+++.|+.++++++.+++
T Consensus       375 ~~~~~k~vlIlGa-GGagrAia~~L~~~G~~V~i~nR~~e~a~~la~~l  422 (529)
T PLN02520        375 SPLAGKLFVVIGA-GGAGKALAYGAKEKGARVVIANRTYERAKELADAV  422 (529)
T ss_pred             cCCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh
Confidence            4578999999998 69999999999999999999999988887776654

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=97.21  E-value=0.0048  Score=70.71  Aligned_cols=187  Identities=15%  Similarity=0.122  Sum_probs=113.0

Q ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhc
Q 019722           32 NLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSL  111 (336)
Q Consensus        32 ~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  111 (336)
                      .+.|+.++|++.+++++.+++.+|.++|+.|+++..... .......+     +..+..+...-.+..++..+++.+...
T Consensus      1752 ~~~~~~~~v~~d~~~~~~~L~~~L~~~G~~v~~~~~~~~-~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1825 (2582)
T TIGR02813      1752 KQSGANALVIDDDGHNAGVLAEKLIAAGWQVAVVRSPWV-VSHSASPL-----ASAIASVTLGTIDDTSIEAVIKDIEEK 1825 (2582)
T ss_pred             cccCceeEEEcCCcchHHHHHHHHHhCCCeEEEeecccc-cccccccc-----ccccccccccccchHHHHHHHHhhhcc
Confidence            356888999988999999999999999998887642211 10000000     223333455555677888888888777


Q ss_pred             CCCccEEEEcccCCCCC-CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccccc
Q 019722          112 NLPLNLLINNAGKFAHQ-HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYL  190 (336)
Q Consensus       112 ~~~id~lv~nAg~~~~~-~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~  190 (336)
                      .+.++.+||..+..... ...+.......-...+...|.+.|.+.+.+...+     .+.++.++...|..+..+.    
T Consensus      1826 ~~~~~g~i~l~~~~~~~~~~~~~~~~~~~~~~~l~~~f~~ak~~~~~l~~~~-----~~~~~~vsr~~G~~g~~~~---- 1896 (2582)
T TIGR02813      1826 TAQIDGFIHLQPQHKSVADKVDAIELPEAAKQSLMLAFLFAKLLNVKLATNA-----RASFVTVSRIDGGFGYSNG---- 1896 (2582)
T ss_pred             ccccceEEEeccccccccccccccccchhhHHHHHHHHHHHHhhchhhccCC-----CeEEEEEEecCCccccCCc----
Confidence            78899999988754321 1011111122222344556778888777665432     4678888877655541100    


Q ss_pred             ccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCc
Q 019722          191 GQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGI  240 (336)
Q Consensus       191 ~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~  240 (336)
                        ..  ........ -....+++.+|+|++++|+...-  +|...+.|..
T Consensus      1897 --~~--~~~~~~~~-~~~~~a~l~Gl~Ktl~~E~P~~~--~r~vDl~~~~ 1939 (2582)
T TIGR02813      1897 --DA--DSGTQQVK-AELNQAALAGLTKTLNHEWNAVF--CRALDLAPKL 1939 (2582)
T ss_pred             --cc--cccccccc-cchhhhhHHHHHHhHHHHCCCCe--EEEEeCCCCc
Confidence              00  00000000 12346789999999999998655  8888887753

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>PRK15116 sulfur acceptor protein CsdL; Provisional

Probab=97.20  E-value=0.01  Score=53.08  Aligned_cols=84  Identities=18%  Similarity=0.274  Sum_probs=56.5

Q ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCCh-------------------HHHHHHHHHHHhhCCCCceEEE
Q 019722           32 NLSSVTAIITGATSGIGAETARVLAKRGA-RLVLPARSL-------------------KAAEEAKARLASDCPGSDIVVL   91 (336)
Q Consensus        32 ~l~gk~~lItGgs~gIG~aia~~L~~~G~-~V~~~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~   91 (336)
                      .|++..++|.| .||+|.++++.|+..|. ++.+++.+.                   .+.+...+.+.+.+|..++..+
T Consensus        27 kL~~s~VlVvG-~GGVGs~vae~Lar~GVg~itLiD~D~V~~sNlnRQ~~~~~~~vG~~Kve~~~~rl~~INP~~~V~~i  105 (268)
T PRK15116         27 LFADAHICVVG-IGGVGSWAAEALARTGIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPECRVTVV  105 (268)
T ss_pred             HhcCCCEEEEC-cCHHHHHHHHHHHHcCCCEEEEEeCCEecccccccccccChhhcChHHHHHHHHHHHhHCCCcEEEEE
Confidence            47888899997 67999999999999995 898887552                   2344556666666666666666


Q ss_pred             eccCCCHHHHHHHHHHHHhcCCCccEEEEccc
Q 019722           92 PLDLSSLSSVRNFVSQFHSLNLPLNLLINNAG  123 (336)
Q Consensus        92 ~~Dl~~~~~v~~~~~~~~~~~~~id~lv~nAg  123 (336)
                      ..-+ +++.+..++      ....|++|.+..
T Consensus       106 ~~~i-~~e~~~~ll------~~~~D~VIdaiD  130 (268)
T PRK15116        106 DDFI-TPDNVAEYM------SAGFSYVIDAID  130 (268)
T ss_pred             eccc-ChhhHHHHh------cCCCCEEEEcCC
Confidence            4222 334443333      125777776665

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=97.19  E-value=0.0011  Score=59.99  Aligned_cols=49  Identities=24%  Similarity=0.331  Sum_probs=43.5

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCC-CEEEEeeCChHHHHHHHHHHH
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRG-ARLVLPARSLKAAEEAKARLA   80 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G-~~V~~~~r~~~~~~~~~~~l~   80 (336)
                      .++++|+++|+|+ ||+|++++..|+..| .+|++++|+.++++++.+++.
T Consensus       119 ~~~~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~  168 (278)
T PRK00258        119 VDLKGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFG  168 (278)
T ss_pred             CCCCCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhh
Confidence            3688999999996 999999999999999 699999999998888777664

>COG3268 Uncharacterized conserved protein [Function unknown]

Probab=97.18  E-value=0.0012  Score=59.65  Aligned_cols=78  Identities=28%  Similarity=0.436  Sum_probs=65.0

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCCCc
Q 019722           36 VTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLPL  115 (336)
Q Consensus        36 k~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i  115 (336)
                      ...+|-||+|..|.-++++|+++|.+..+.+||..++..+...|     +.+...+.+.+  +..+++.+.       +.
T Consensus         7 ~d~iiYGAtGy~G~lvae~l~~~g~~~aLAgRs~~kl~~l~~~L-----G~~~~~~p~~~--p~~~~~~~~-------~~   72 (382)
T COG3268           7 YDIIIYGATGYAGGLVAEYLAREGLTAALAGRSSAKLDALRASL-----GPEAAVFPLGV--PAALEAMAS-------RT   72 (382)
T ss_pred             eeEEEEccccchhHHHHHHHHHcCCchhhccCCHHHHHHHHHhc-----CccccccCCCC--HHHHHHHHh-------cc
Confidence            46899999999999999999999999999999999998888776     55666666665  666666665       67


Q ss_pred             cEEEEcccCCCC
Q 019722          116 NLLINNAGKFAH  127 (336)
Q Consensus       116 d~lv~nAg~~~~  127 (336)
                      ++|+||+|.+..
T Consensus        73 ~VVlncvGPyt~   84 (382)
T COG3268          73 QVVLNCVGPYTR   84 (382)
T ss_pred             eEEEeccccccc
Confidence            999999997654

>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases

Probab=97.18  E-value=0.0066  Score=55.70  Aligned_cols=117  Identities=19%  Similarity=0.228  Sum_probs=75.8

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHCC--CEEEEeeCChHHHHHHHHHHHhhCC--CCceEEEeccCCCHHHHHHHHHHHHhc
Q 019722           36 VTAIITGATSGIGAETARVLAKRG--ARLVLPARSLKAAEEAKARLASDCP--GSDIVVLPLDLSSLSSVRNFVSQFHSL  111 (336)
Q Consensus        36 k~~lItGgs~gIG~aia~~L~~~G--~~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~  111 (336)
                      +.+.|.|+ |++|.+++..|+.+|  .+|++++++.+.++.....+.....  +....+..   .+.+.           
T Consensus         1 ~kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~~---~~~~~-----------   65 (306)
T cd05291           1 RKVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIKA---GDYSD-----------   65 (306)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEEc---CCHHH-----------
Confidence            35778885 999999999999999  4899999999888877777755321  12222222   12211           


Q ss_pred             CCCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCcc
Q 019722          112 NLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIH  179 (336)
Q Consensus       112 ~~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~  179 (336)
                      ....|++|+++|....+ ..+.   .+.++.|    ..+++...+.+.+..    +.+.+|++|.+..
T Consensus        66 l~~aDIVIitag~~~~~-g~~R---~dll~~N----~~i~~~~~~~i~~~~----~~~~vivvsNP~d  121 (306)
T cd05291          66 CKDADIVVITAGAPQKP-GETR---LDLLEKN----AKIMKSIVPKIKASG----FDGIFLVASNPVD  121 (306)
T ss_pred             hCCCCEEEEccCCCCCC-CCCH---HHHHHHH----HHHHHHHHHHHHHhC----CCeEEEEecChHH
Confidence            13689999999975432 1122   2334444    446677777776643    2578888887653

L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=97.14  E-value=0.0026  Score=57.70  Aligned_cols=79  Identities=14%  Similarity=0.120  Sum_probs=55.9

Q ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHh
Q 019722           32 NLSSVTAIITGATSGIGAETARVLAKRGA-RLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHS  110 (336)
Q Consensus        32 ~l~gk~~lItGgs~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  110 (336)
                      ++++|+++|.| +||.|++++..|++.|+ +|.++.|+.++++++++.+...   ..+..    +...+++..       
T Consensus       122 ~~~~k~vlvlG-aGGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~---~~~~~----~~~~~~~~~-------  186 (282)
T TIGR01809       122 PLAGFRGLVIG-AGGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQV---GVITR----LEGDSGGLA-------  186 (282)
T ss_pred             ccCCceEEEEc-CcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhc---Cccee----ccchhhhhh-------
Confidence            57889999997 59999999999999997 7999999999998887765332   11111    111111211       


Q ss_pred             cCCCccEEEEcccCC
Q 019722          111 LNLPLNLLINNAGKF  125 (336)
Q Consensus       111 ~~~~id~lv~nAg~~  125 (336)
                      .....|+|||+....
T Consensus       187 ~~~~~DiVInaTp~g  201 (282)
T TIGR01809       187 IEKAAEVLVSTVPAD  201 (282)
T ss_pred             cccCCCEEEECCCCC
Confidence            123589999998764

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=97.12  E-value=0.0047  Score=57.83  Aligned_cols=83  Identities=18%  Similarity=0.278  Sum_probs=63.7

Q ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCCh-------------------HHHHHHHHHHHhhCCCCceEEE
Q 019722           32 NLSSVTAIITGATSGIGAETARVLAKRGA-RLVLPARSL-------------------KAAEEAKARLASDCPGSDIVVL   91 (336)
Q Consensus        32 ~l~gk~~lItGgs~gIG~aia~~L~~~G~-~V~~~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~   91 (336)
                      .|++++|+|.|+ ||+|.++++.|+..|. ++.+++.+.                   .+++.+.+.+++.+|..++..+
T Consensus        25 ~L~~~~VlivG~-GGlGs~~a~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~v~~~  103 (355)
T PRK05597         25 SLFDAKVAVIGA-GGLGSPALLYLAGAGVGHITIIDDDTVDLSNLHRQVIHSTAGVGQPKAESAREAMLALNPDVKVTVS  103 (355)
T ss_pred             HHhCCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEEcccccccCcccChhHCCChHHHHHHHHHHHHCCCcEEEEE
Confidence            478899999985 8999999999999998 888887653                   4677788888888888888888


Q ss_pred             eccCCCHHHHHHHHHHHHhcCCCccEEEEccc
Q 019722           92 PLDLSSLSSVRNFVSQFHSLNLPLNLLINNAG  123 (336)
Q Consensus        92 ~~Dl~~~~~v~~~~~~~~~~~~~id~lv~nAg  123 (336)
                      ...++. +....+++       ..|++|.+..
T Consensus       104 ~~~i~~-~~~~~~~~-------~~DvVvd~~d  127 (355)
T PRK05597        104 VRRLTW-SNALDELR-------DADVILDGSD  127 (355)
T ss_pred             EeecCH-HHHHHHHh-------CCCEEEECCC
Confidence            777753 23333332       5788887763

>PRK06849 hypothetical protein; Provisional

Probab=97.12  E-value=0.0048  Score=58.60  Aligned_cols=83  Identities=17%  Similarity=0.194  Sum_probs=54.9

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCC
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNL  113 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  113 (336)
                      +.|+|||||++.++|.++++.|.+.|++|++++.++.......+.+      .....+...-.+++.....+.++.+++ 
T Consensus         3 ~~~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~~~~~~~~~s~~~------d~~~~~p~p~~d~~~~~~~L~~i~~~~-   75 (389)
T PRK06849          3 TKKTVLITGARAPAALELARLFHNAGHTVILADSLKYPLSRFSRAV------DGFYTIPSPRWDPDAYIQALLSIVQRE-   75 (389)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHhh------hheEEeCCCCCCHHHHHHHHHHHHHHc-
Confidence            4589999999999999999999999999999998875543222221      223333222234443333333444433 


Q ss_pred             CccEEEEccc
Q 019722          114 PLNLLINNAG  123 (336)
Q Consensus       114 ~id~lv~nAg  123 (336)
                      ++|++|-...
T Consensus        76 ~id~vIP~~e   85 (389)
T PRK06849         76 NIDLLIPTCE   85 (389)
T ss_pred             CCCEEEECCh
Confidence            5899998765

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=97.12  E-value=0.0031  Score=60.19  Aligned_cols=78  Identities=18%  Similarity=0.262  Sum_probs=56.8

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGA-RLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      .+++||+++|.|+ ||+|..+++.|+++|. +|+++.|+.++++.+.+++.    .  ..++     ..+++...     
T Consensus       177 ~~l~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~----~--~~~~-----~~~~l~~~-----  239 (414)
T PRK13940        177 DNISSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFR----N--ASAH-----YLSELPQL-----  239 (414)
T ss_pred             cCccCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhc----C--CeEe-----cHHHHHHH-----
Confidence            4689999999996 9999999999999996 79999999888877666541    1  1111     12222222     


Q ss_pred             hcCCCccEEEEcccCCCC
Q 019722          110 SLNLPLNLLINNAGKFAH  127 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~~  127 (336)
                        ....|++|++.+...+
T Consensus       240 --l~~aDiVI~aT~a~~~  255 (414)
T PRK13940        240 --IKKADIIIAAVNVLEY  255 (414)
T ss_pred             --hccCCEEEECcCCCCe
Confidence              2357999999986544

>cd00704 MDH Malate dehydrogenase

Probab=97.11  E-value=0.0052  Score=56.73  Aligned_cols=117  Identities=13%  Similarity=0.037  Sum_probs=70.8

Q ss_pred             EEEEeCCCChHHHHHHHHHHHCCC-------EEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHH--H--HHH
Q 019722           37 TAIITGATSGIGAETARVLAKRGA-------RLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSV--R--NFV  105 (336)
Q Consensus        37 ~~lItGgs~gIG~aia~~L~~~G~-------~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v--~--~~~  105 (336)
                      .+.||||+|.+|..++..|+.+|.       .++++++++..              ........|+.+....  .  .+.
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~--------------~~~~g~~~Dl~d~~~~~~~~~~i~   67 (323)
T cd00704           2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAM--------------KALEGVVMELQDCAFPLLKGVVIT   67 (323)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCcc--------------CccceeeeehhhhcccccCCcEEe
Confidence            578999999999999999998773       49999988620              1222234444443200  0  000


Q ss_pred             HHHHhcCCCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCc
Q 019722          106 SQFHSLNLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSI  178 (336)
Q Consensus       106 ~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~  178 (336)
                      ....+.+...|++|+.||....+. .+   =.+.+..|    ..+++.+.+.+.+..   ++.+.+|++|.+.
T Consensus        68 ~~~~~~~~~aDiVVitAG~~~~~g-~t---R~dll~~N----~~i~~~i~~~i~~~~---~~~~iiivvsNPv  129 (323)
T cd00704          68 TDPEEAFKDVDVAILVGAFPRKPG-ME---RADLLRKN----AKIFKEQGEALNKVA---KPTVKVLVVGNPA  129 (323)
T ss_pred             cChHHHhCCCCEEEEeCCCCCCcC-Cc---HHHHHHHh----HHHHHHHHHHHHHhC---CCCeEEEEeCCcH
Confidence            111222347899999999754321 12   22344444    457788888887762   1257888887654

Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=97.11  E-value=0.0039  Score=58.96  Aligned_cols=83  Identities=20%  Similarity=0.368  Sum_probs=62.7

Q ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCC-------------------hHHHHHHHHHHHhhCCCCceEEE
Q 019722           32 NLSSVTAIITGATSGIGAETARVLAKRGA-RLVLPARS-------------------LKAAEEAKARLASDCPGSDIVVL   91 (336)
Q Consensus        32 ~l~gk~~lItGgs~gIG~aia~~L~~~G~-~V~~~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~~   91 (336)
                      .+++++|+|.| .||+|.++++.|+..|. ++.+++++                   ..+++.+.+.+++.+|..++..+
T Consensus       132 ~l~~~~VlvvG-~GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~  210 (376)
T PRK08762        132 RLLEARVLLIG-AGGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNPDVQVEAV  210 (376)
T ss_pred             HHhcCcEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCCCCEEEEE
Confidence            36788899996 58999999999999998 89999987                   45677778888887777777777


Q ss_pred             eccCCCHHHHHHHHHHHHhcCCCccEEEEccc
Q 019722           92 PLDLSSLSSVRNFVSQFHSLNLPLNLLINNAG  123 (336)
Q Consensus        92 ~~Dl~~~~~v~~~~~~~~~~~~~id~lv~nAg  123 (336)
                      ...++. +.+..+++       ..|++|++..
T Consensus       211 ~~~~~~-~~~~~~~~-------~~D~Vv~~~d  234 (376)
T PRK08762        211 QERVTS-DNVEALLQ-------DVDVVVDGAD  234 (376)
T ss_pred             eccCCh-HHHHHHHh-------CCCEEEECCC
Confidence            655543 33333332       5788888775

>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent

Probab=97.09  E-value=0.0053  Score=56.72  Aligned_cols=117  Identities=13%  Similarity=0.024  Sum_probs=73.1

Q ss_pred             EEEEeCCCChHHHHHHHHHHHCCC-------EEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHH--HH--
Q 019722           37 TAIITGATSGIGAETARVLAKRGA-------RLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRN--FV--  105 (336)
Q Consensus        37 ~~lItGgs~gIG~aia~~L~~~G~-------~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~--~~--  105 (336)
                      .+.|+|++|.+|.+++..|+.+|.       .++++++++..              ........|+.+......  ..  
T Consensus         1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~--------------~~a~g~~~Dl~d~~~~~~~~~~~~   66 (324)
T TIGR01758         1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAM--------------KVLEGVVMELMDCAFPLLDGVVPT   66 (324)
T ss_pred             CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCcc--------------cccceeEeehhcccchhcCceecc
Confidence            378999999999999999998664       49999987442              123334455555441110  00  


Q ss_pred             HHHHhcCCCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCc
Q 019722          106 SQFHSLNLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSI  178 (336)
Q Consensus       106 ~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~  178 (336)
                      ....+.+...|++|+.||.....    .+...+.+..|    ..+++.+.+.+.+..   ++.+.+|++|.+.
T Consensus        67 ~~~~~~~~~aDiVVitAG~~~~~----~~tr~~ll~~N----~~i~k~i~~~i~~~~---~~~~iiivvsNPv  128 (324)
T TIGR01758        67 HDPAVAFTDVDVAILVGAFPRKE----GMERRDLLSKN----VKIFKEQGRALDKLA---KKDCKVLVVGNPA  128 (324)
T ss_pred             CChHHHhCCCCEEEEcCCCCCCC----CCcHHHHHHHH----HHHHHHHHHHHHhhC---CCCeEEEEeCCcH
Confidence            01112244789999999975331    22345566555    457777777777652   1257888888754

This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=97.08  E-value=0.0054  Score=53.12  Aligned_cols=82  Identities=20%  Similarity=0.282  Sum_probs=60.1

Q ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCCh------------------HHHHHHHHHHHhhCCCCceEEEe
Q 019722           32 NLSSVTAIITGATSGIGAETARVLAKRGA-RLVLPARSL------------------KAAEEAKARLASDCPGSDIVVLP   92 (336)
Q Consensus        32 ~l~gk~~lItGgs~gIG~aia~~L~~~G~-~V~~~~r~~------------------~~~~~~~~~l~~~~~~~~~~~~~   92 (336)
                      .+++++++|.| .||+|..+++.|+..|. ++.+++.+.                  .+++.+.+.+++.+|..++..+.
T Consensus        25 ~L~~~~V~ViG-~GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~dvG~~Ka~~a~~~l~~lnp~v~v~~~~  103 (212)
T PRK08644         25 KLKKAKVGIAG-AGGLGSNIAVALARSGVGNLKLVDFDVVEPSNLNRQQYFISQIGMPKVEALKENLLEINPFVEIEAHN  103 (212)
T ss_pred             HHhCCCEEEEC-cCHHHHHHHHHHHHcCCCeEEEEeCCEeccccccccEeehhhCCChHHHHHHHHHHHHCCCCEEEEEe
Confidence            36788999998 68999999999999998 799988772                  45666667777777777777777


Q ss_pred             ccCCCHHHHHHHHHHHHhcCCCccEEEEcc
Q 019722           93 LDLSSLSSVRNFVSQFHSLNLPLNLLINNA  122 (336)
Q Consensus        93 ~Dl~~~~~v~~~~~~~~~~~~~id~lv~nA  122 (336)
                      ..+++ +.+..++       ...|++|.+.
T Consensus       104 ~~i~~-~~~~~~~-------~~~DvVI~a~  125 (212)
T PRK08644        104 EKIDE-DNIEELF-------KDCDIVVEAF  125 (212)
T ss_pred             eecCH-HHHHHHH-------cCCCEEEECC
Confidence            66654 2232322       3578888764

>PRK14968 putative methyltransferase; Provisional

Probab=97.04  E-value=0.0078  Score=50.65  Aligned_cols=80  Identities=24%  Similarity=0.221  Sum_probs=55.9

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCc-eEEEeccCCCHHHHHHHHHHHHhc
Q 019722           33 LSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSD-IVVLPLDLSSLSSVRNFVSQFHSL  111 (336)
Q Consensus        33 l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~-~~~~~~Dl~~~~~v~~~~~~~~~~  111 (336)
                      ..++++|-.|++.|.   ++..|++++.+|+.++++++..+...+.++......+ +.++.+|+.+.         +.+ 
T Consensus        22 ~~~~~vLd~G~G~G~---~~~~l~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~---------~~~-   88 (188)
T PRK14968         22 KKGDRVLEVGTGSGI---VAIVAAKNGKKVVGVDINPYAVECAKCNAKLNNIRNNGVEVIRSDLFEP---------FRG-   88 (188)
T ss_pred             cCCCEEEEEccccCH---HHHHHHhhcceEEEEECCHHHHHHHHHHHHHcCCCCcceEEEecccccc---------ccc-
Confidence            467888988887766   5566666688999999998887777666654422222 88888887442         111 


Q ss_pred             CCCccEEEEcccCCC
Q 019722          112 NLPLNLLINNAGKFA  126 (336)
Q Consensus       112 ~~~id~lv~nAg~~~  126 (336)
                       ..+|+++.|.....
T Consensus        89 -~~~d~vi~n~p~~~  102 (188)
T PRK14968         89 -DKFDVILFNPPYLP  102 (188)
T ss_pred             -cCceEEEECCCcCC
Confidence             26899999987654

>PRK08223 hypothetical protein; Validated

Probab=97.01  E-value=0.0049  Score=55.53  Aligned_cols=64  Identities=20%  Similarity=0.307  Sum_probs=48.5

Q ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCCh-------------------HHHHHHHHHHHhhCCCCceEEE
Q 019722           32 NLSSVTAIITGATSGIGAETARVLAKRGA-RLVLPARSL-------------------KAAEEAKARLASDCPGSDIVVL   91 (336)
Q Consensus        32 ~l~gk~~lItGgs~gIG~aia~~L~~~G~-~V~~~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~   91 (336)
                      .|++.+|+|.| .||+|..+++.|+..|. ++.+++.+.                   .+++.+.+.+++.+|..++..+
T Consensus        24 kL~~s~VlIvG-~GGLGs~va~~LA~aGVG~i~lvD~D~Ve~SNLnRQ~l~~~~diG~~Kve~a~~~l~~iNP~v~V~~~  102 (287)
T PRK08223         24 RLRNSRVAIAG-LGGVGGIHLLTLARLGIGKFTIADFDVFELRNFNRQAGAMMSTLGRPKAEVLAEMVRDINPELEIRAF  102 (287)
T ss_pred             HHhcCCEEEEC-CCHHHHHHHHHHHHhCCCeEEEEeCCCcchhccccccCcChhHCCCcHHHHHHHHHHHHCCCCEEEEE
Confidence            36788999998 67999999999999998 888887652                   3455556666666666667766


Q ss_pred             eccCC
Q 019722           92 PLDLS   96 (336)
Q Consensus        92 ~~Dl~   96 (336)
                      ...++
T Consensus       103 ~~~l~  107 (287)
T PRK08223        103 PEGIG  107 (287)
T ss_pred             ecccC
Confidence            66665

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB

Probab=97.00  E-value=0.0072  Score=53.37  Aligned_cols=83  Identities=20%  Similarity=0.325  Sum_probs=57.3

Q ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCCh-------------------HHHHHHHHHHHhhCCCCceEEE
Q 019722           32 NLSSVTAIITGATSGIGAETARVLAKRGA-RLVLPARSL-------------------KAAEEAKARLASDCPGSDIVVL   91 (336)
Q Consensus        32 ~l~gk~~lItGgs~gIG~aia~~L~~~G~-~V~~~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~   91 (336)
                      .+++++|+|.| .||+|..+++.|+..|. ++.+++.+.                   .+++.+.+.+++.+|+.++..+
T Consensus        21 ~L~~~~VlvvG-~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~inp~v~i~~~   99 (240)
T TIGR02355        21 ALKASRVLIVG-LGGLGCAASQYLAAAGVGNLTLLDFDTVSLSNLQRQVLHSDANIGQPKVESAKDALTQINPHIAINPI   99 (240)
T ss_pred             HHhCCcEEEEC-cCHHHHHHHHHHHHcCCCEEEEEeCCcccccCcccceeeeHhhCCCcHHHHHHHHHHHHCCCcEEEEE
Confidence            47888999997 68999999999999997 888877652                   3455566667767666667666


Q ss_pred             eccCCCHHHHHHHHHHHHhcCCCccEEEEccc
Q 019722           92 PLDLSSLSSVRNFVSQFHSLNLPLNLLINNAG  123 (336)
Q Consensus        92 ~~Dl~~~~~v~~~~~~~~~~~~~id~lv~nAg  123 (336)
                      ...++. +.+.+++       ...|++|.+..
T Consensus       100 ~~~i~~-~~~~~~~-------~~~DlVvd~~D  123 (240)
T TIGR02355       100 NAKLDD-AELAALI-------AEHDIVVDCTD  123 (240)
T ss_pred             eccCCH-HHHHHHh-------hcCCEEEEcCC
Confidence            655532 2233332       25677776653

This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).

>PRK00066 ldh L-lactate dehydrogenase; Reviewed

Probab=96.97  E-value=0.041  Score=50.70  Aligned_cols=123  Identities=15%  Similarity=0.193  Sum_probs=79.8

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCC--EEEEeeCChHHHHHHHHHHHhhCCC-CceEEEeccCCCHHHHHHHHHH
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGA--RLVLPARSLKAAEEAKARLASDCPG-SDIVVLPLDLSSLSSVRNFVSQ  107 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~--~V~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~~Dl~~~~~v~~~~~~  107 (336)
                      ++=.++.+.|+|+ |++|.+++..|+.+|.  .+++++++.+.++-....++...+- .++....   .+   .+    .
T Consensus         2 ~~~~~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~~---~~---~~----~   70 (315)
T PRK00066          2 MKKQHNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIYA---GD---YS----D   70 (315)
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEEEe---CC---HH----H
Confidence            3446679999997 9999999999999996  7999999988877777777654321 1222221   11   11    1


Q ss_pred             HHhcCCCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccc
Q 019722          108 FHSLNLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHS  180 (336)
Q Consensus       108 ~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~  180 (336)
                          +..-|++|..||....+. .+.   .+.+..|    ..+++.+.+.+.+...    .+.+|++|.+...
T Consensus        71 ----~~~adivIitag~~~k~g-~~R---~dll~~N----~~i~~~i~~~i~~~~~----~~~vivvsNP~d~  127 (315)
T PRK00066         71 ----CKDADLVVITAGAPQKPG-ETR---LDLVEKN----LKIFKSIVGEVMASGF----DGIFLVASNPVDI  127 (315)
T ss_pred             ----hCCCCEEEEecCCCCCCC-CCH---HHHHHHH----HHHHHHHHHHHHHhCC----CeEEEEccCcHHH
Confidence                226799999999754321 222   2344444    3455666666665432    5788888876543

>cd01487 E1_ThiF_like E1_ThiF_like

Probab=96.97  E-value=0.0074  Score=50.58  Aligned_cols=76  Identities=20%  Similarity=0.311  Sum_probs=53.1

Q ss_pred             EEEeCCCChHHHHHHHHHHHCCC-EEEEeeCCh------------------HHHHHHHHHHHhhCCCCceEEEeccCCCH
Q 019722           38 AIITGATSGIGAETARVLAKRGA-RLVLPARSL------------------KAAEEAKARLASDCPGSDIVVLPLDLSSL   98 (336)
Q Consensus        38 ~lItGgs~gIG~aia~~L~~~G~-~V~~~~r~~------------------~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~   98 (336)
                      ++|.| .||+|..+++.|+..|. ++.+++.+.                  .+.+...+.+++.+|..++..+...++. 
T Consensus         2 VlViG-~GglGs~ia~~La~~Gvg~i~lvD~D~v~~sNl~Rq~~~~~~vg~~Ka~~~~~~l~~lnp~v~i~~~~~~~~~-   79 (174)
T cd01487           2 VGIAG-AGGLGSNIAVLLARSGVGNLKLVDFDVVEPSNLNRQQYFLSQIGEPKVEALKENLREINPFVKIEAINIKIDE-   79 (174)
T ss_pred             EEEEC-cCHHHHHHHHHHHHcCCCeEEEEeCCEEcCcchhcccccHhhCCChHHHHHHHHHHHHCCCCEEEEEEeecCh-
Confidence            67777 69999999999999998 799998774                  3455566666666666677766666543 


Q ss_pred             HHHHHHHHHHHhcCCCccEEEEcc
Q 019722           99 SSVRNFVSQFHSLNLPLNLLINNA  122 (336)
Q Consensus        99 ~~v~~~~~~~~~~~~~id~lv~nA  122 (336)
                      +.+.+++       ...|++|.+.
T Consensus        80 ~~~~~~l-------~~~DlVi~~~   96 (174)
T cd01487          80 NNLEGLF-------GDCDIVVEAF   96 (174)
T ss_pred             hhHHHHh-------cCCCEEEECC
Confidence            2233332       2567777663

Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins

Probab=96.97  E-value=0.0079  Score=48.53  Aligned_cols=78  Identities=26%  Similarity=0.380  Sum_probs=55.8

Q ss_pred             EEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCC-------------------hHHHHHHHHHHHhhCCCCceEEEeccCC
Q 019722           37 TAIITGATSGIGAETARVLAKRGA-RLVLPARS-------------------LKAAEEAKARLASDCPGSDIVVLPLDLS   96 (336)
Q Consensus        37 ~~lItGgs~gIG~aia~~L~~~G~-~V~~~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~~~~Dl~   96 (336)
                      +++|.|+ ||+|.++++.|+..|. ++.+++.+                   ..+++.+.+.+++.+|..++..+..++.
T Consensus         1 ~VliiG~-GglGs~ia~~L~~~Gv~~i~ivD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~~p~v~i~~~~~~~~   79 (143)
T cd01483           1 RVLLVGL-GGLGSEIALNLARSGVGKITLIDFDTVELSNLNRQFLARQADIGKPKAEVAARRLNELNPGVNVTAVPEGIS   79 (143)
T ss_pred             CEEEECC-CHHHHHHHHHHHHCCCCEEEEEcCCCcCcchhhccccCChhHCCChHHHHHHHHHHHHCCCcEEEEEeeecC
Confidence            3678885 9999999999999998 78888654                   1355666777777777777777777665


Q ss_pred             CHHHHHHHHHHHHhcCCCccEEEEccc
Q 019722           97 SLSSVRNFVSQFHSLNLPLNLLINNAG  123 (336)
Q Consensus        97 ~~~~v~~~~~~~~~~~~~id~lv~nAg  123 (336)
                      +...        .+.+.+.|++|.+..
T Consensus        80 ~~~~--------~~~~~~~diVi~~~d   98 (143)
T cd01483          80 EDNL--------DDFLDGVDLVIDAID   98 (143)
T ss_pred             hhhH--------HHHhcCCCEEEECCC
Confidence            4322        112236788887765

This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.

>PRK08328 hypothetical protein; Provisional

Probab=96.94  E-value=0.011  Score=51.99  Aligned_cols=36  Identities=28%  Similarity=0.499  Sum_probs=31.3

Q ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCC
Q 019722           32 NLSSVTAIITGATSGIGAETARVLAKRGA-RLVLPARS   68 (336)
Q Consensus        32 ~l~gk~~lItGgs~gIG~aia~~L~~~G~-~V~~~~r~   68 (336)
                      .+++++++|.| .||+|.++++.|+..|. ++.+++.+
T Consensus        24 ~L~~~~VlIiG-~GGlGs~ia~~La~~Gvg~i~lvD~D   60 (231)
T PRK08328         24 KLKKAKVAVVG-VGGLGSPVAYYLAAAGVGRILLIDEQ   60 (231)
T ss_pred             HHhCCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCC
Confidence            46788999998 67999999999999998 88888755

>PRK12749 quinate/shikimate dehydrogenase; Reviewed

Probab=96.92  E-value=0.0081  Score=54.56  Aligned_cols=49  Identities=20%  Similarity=0.186  Sum_probs=40.3

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCCh---HHHHHHHHHHH
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGA-RLVLPARSL---KAAEEAKARLA   80 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~-~V~~~~r~~---~~~~~~~~~l~   80 (336)
                      .++++|+++|.|+ ||-+++++..|+..|. +|.++.|+.   ++++++.+.+.
T Consensus       120 ~~~~~k~vlvlGa-GGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~  172 (288)
T PRK12749        120 FDIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVN  172 (288)
T ss_pred             CCcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhh
Confidence            4578899999995 7779999999999997 899999995   46666666554

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=96.91  E-value=0.021  Score=55.78  Aligned_cols=114  Identities=15%  Similarity=0.213  Sum_probs=72.5

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCH------------
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSL------------   98 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~------------   98 (336)
                      ....+.+|+|+| .|.+|...+..+...|++|+++++++++.+...+ +     +.+...+  |..+.            
T Consensus       161 G~~pg~kVlViG-aG~iGL~Ai~~Ak~lGA~V~a~D~~~~rle~aes-l-----GA~~v~i--~~~e~~~~~~gya~~~s  231 (509)
T PRK09424        161 GKVPPAKVLVIG-AGVAGLAAIGAAGSLGAIVRAFDTRPEVAEQVES-M-----GAEFLEL--DFEEEGGSGDGYAKVMS  231 (509)
T ss_pred             CCcCCCEEEEEC-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-c-----CCeEEEe--ccccccccccchhhhcc
Confidence            355688999998 6899999999999999999999999887664332 2     4443322  22221            


Q ss_pred             -HHHHHHHHHHHhcCCCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCC
Q 019722           99 -SSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSS  177 (336)
Q Consensus        99 -~~v~~~~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~  177 (336)
                       +..+...+.+.+..+..|++|.++|......                 +..+.+..+..|+.       +|+||.++..
T Consensus       232 ~~~~~~~~~~~~~~~~gaDVVIetag~pg~~a-----------------P~lit~~~v~~mkp-------GgvIVdvg~~  287 (509)
T PRK09424        232 EEFIKAEMALFAEQAKEVDIIITTALIPGKPA-----------------PKLITAEMVASMKP-------GSVIVDLAAE  287 (509)
T ss_pred             hhHHHHHHHHHHhccCCCCEEEECCCCCcccC-----------------cchHHHHHHHhcCC-------CCEEEEEccC
Confidence             1122222223333357999999999744221                 11123555556654       5788888874

>PRK05600 thiamine biosynthesis protein ThiF; Validated

Probab=96.91  E-value=0.0096  Score=56.04  Aligned_cols=83  Identities=19%  Similarity=0.340  Sum_probs=62.1

Q ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCC-------------------hHHHHHHHHHHHhhCCCCceEEE
Q 019722           32 NLSSVTAIITGATSGIGAETARVLAKRGA-RLVLPARS-------------------LKAAEEAKARLASDCPGSDIVVL   91 (336)
Q Consensus        32 ~l~gk~~lItGgs~gIG~aia~~L~~~G~-~V~~~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~~   91 (336)
                      .+.+.+|+|.| .||+|..+++.|+..|. ++.+++.+                   ..+++.+.+.+++.+|+.++..+
T Consensus        38 ~l~~~~VliiG-~GglG~~v~~~La~~Gvg~i~ivD~D~ve~sNL~RQ~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~  116 (370)
T PRK05600         38 RLHNARVLVIG-AGGLGCPAMQSLASAGVGTITLIDDDTVDVSNIHRQILFGASDVGRPKVEVAAERLKEIQPDIRVNAL  116 (370)
T ss_pred             HhcCCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCCEEccccccccccCChhHCCCHHHHHHHHHHHHHCCCCeeEEe
Confidence            46788999998 68999999999999997 89998766                   34667777788887777788888


Q ss_pred             eccCCCHHHHHHHHHHHHhcCCCccEEEEccc
Q 019722           92 PLDLSSLSSVRNFVSQFHSLNLPLNLLINNAG  123 (336)
Q Consensus        92 ~~Dl~~~~~v~~~~~~~~~~~~~id~lv~nAg  123 (336)
                      ...++ .+.+..+++       ..|++|.+..
T Consensus       117 ~~~i~-~~~~~~~~~-------~~DlVid~~D  140 (370)
T PRK05600        117 RERLT-AENAVELLN-------GVDLVLDGSD  140 (370)
T ss_pred             eeecC-HHHHHHHHh-------CCCEEEECCC
Confidence            77775 333333332       5688877654

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=96.91  E-value=0.0051  Score=55.44  Aligned_cols=81  Identities=23%  Similarity=0.286  Sum_probs=58.6

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGA-RLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      .+.+|+.++|.| +||-+++++..|++.|. +|+++.|+.++++++.+.+.+...  .+..  .+..+.+...       
T Consensus       122 ~~~~~~~vlilG-AGGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~~--~~~~--~~~~~~~~~~-------  189 (283)
T COG0169         122 VDVTGKRVLILG-AGGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGELGA--AVEA--AALADLEGLE-------  189 (283)
T ss_pred             cccCCCEEEEEC-CcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccc--cccc--cccccccccc-------
Confidence            456789999998 78999999999999996 899999999999999888765421  1111  1222221111       


Q ss_pred             hcCCCccEEEEcccCCCC
Q 019722          110 SLNLPLNLLINNAGKFAH  127 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~~  127 (336)
                          ..|++||+......
T Consensus       190 ----~~dliINaTp~Gm~  203 (283)
T COG0169         190 ----EADLLINATPVGMA  203 (283)
T ss_pred             ----ccCEEEECCCCCCC
Confidence                36999999875433

>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases

Probab=96.90  E-value=0.012  Score=54.43  Aligned_cols=164  Identities=15%  Similarity=0.058  Sum_probs=99.2

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHCCC-------EEEEeeCChHH--HHHHHHHHHhhC-CC-CceEEEeccCCCHHHHHHH
Q 019722           36 VTAIITGATSGIGAETARVLAKRGA-------RLVLPARSLKA--AEEAKARLASDC-PG-SDIVVLPLDLSSLSSVRNF  104 (336)
Q Consensus        36 k~~lItGgs~gIG~aia~~L~~~G~-------~V~~~~r~~~~--~~~~~~~l~~~~-~~-~~~~~~~~Dl~~~~~v~~~  104 (336)
                      +.+.|+|++|.+|.+++..|+.+|.       ++++++.++..  ++-....+.... +- .++.+. .     ..    
T Consensus         3 ~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~-~-----~~----   72 (322)
T cd01338           3 VRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEIVIT-D-----DP----   72 (322)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhccccccCceEEe-c-----Cc----
Confidence            4789999999999999999998885       69999985432  333333333211 10 111111 0     01    


Q ss_pred             HHHHHhcCCCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccC
Q 019722          105 VSQFHSLNLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSG  184 (336)
Q Consensus       105 ~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~  184 (336)
                      .    +.+..-|++|.+||....+ ..+.   .+.+..|    ..+++.+.+.+.+...   +.+.+|++|.+.-.....
T Consensus        73 ~----~~~~daDivvitaG~~~k~-g~tR---~dll~~N----~~i~~~i~~~i~~~~~---~~~iiivvsNPvD~~t~~  137 (322)
T cd01338          73 N----VAFKDADWALLVGAKPRGP-GMER---ADLLKAN----GKIFTAQGKALNDVAS---RDVKVLVVGNPCNTNALI  137 (322)
T ss_pred             H----HHhCCCCEEEEeCCCCCCC-CCcH---HHHHHHH----HHHHHHHHHHHHhhCC---CCeEEEEecCcHHHHHHH
Confidence            1    1123689999999975432 1222   2334444    4577788888876531   147888888754332100


Q ss_pred             CcccccccccCCCC-CCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEE
Q 019722          185 DMIRYLGQISRNKS-HYDATRAYALSKLANVLHTKELAQRLKQMEANVTV  233 (336)
Q Consensus       185 ~~~~~~~~~~~~~~-~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~v  233 (336)
                            -.   ... .++....|+.++.--..|...+++.+.-....|+.
T Consensus       138 ------~~---k~sg~~p~~~ViG~t~LDs~Rl~~~la~~lgv~~~~v~~  178 (322)
T cd01338         138 ------AM---KNAPDIPPDNFTAMTRLDHNRAKSQLAKKAGVPVTDVKN  178 (322)
T ss_pred             ------HH---HHcCCCChHheEEehHHHHHHHHHHHHHHhCcChhHeEE
Confidence                  00   011 15666789999999999999999998765434554

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=96.90  E-value=0.0085  Score=51.38  Aligned_cols=81  Identities=21%  Similarity=0.342  Sum_probs=54.6

Q ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCC---h---------------HHHHHHHHHHHhhCCCCceEEEe
Q 019722           32 NLSSVTAIITGATSGIGAETARVLAKRGA-RLVLPARS---L---------------KAAEEAKARLASDCPGSDIVVLP   92 (336)
Q Consensus        32 ~l~gk~~lItGgs~gIG~aia~~L~~~G~-~V~~~~r~---~---------------~~~~~~~~~l~~~~~~~~~~~~~   92 (336)
                      .|..++++|.|+ ||+|..++..|++.|. +|++++++   .               .+.+...+.+++.+|..++..+.
T Consensus        18 ~L~~~~V~IvG~-GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~~iG~~Ka~~~~~~l~~inp~~~i~~~~   96 (200)
T TIGR02354        18 KLEQATVAICGL-GGLGSNVAINLARAGIGKLILVDFDVVEPSNLNRQQYKASQVGEPKTEALKENISEINPYTEIEAYD   96 (200)
T ss_pred             HHhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCEEcccccccccCChhhCCCHHHHHHHHHHHHHCCCCEEEEee
Confidence            477889999985 8999999999999998 79999887   2               23333444555555556666666


Q ss_pred             ccCCCHHHHHHHHHHHHhcCCCccEEEEc
Q 019722           93 LDLSSLSSVRNFVSQFHSLNLPLNLLINN  121 (336)
Q Consensus        93 ~Dl~~~~~v~~~~~~~~~~~~~id~lv~n  121 (336)
                      .+++. +.+..++       ...|++|.+
T Consensus        97 ~~i~~-~~~~~~~-------~~~DlVi~a  117 (200)
T TIGR02354        97 EKITE-ENIDKFF-------KDADIVCEA  117 (200)
T ss_pred             eeCCH-hHHHHHh-------cCCCEEEEC
Confidence            66642 2222222       256777765

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>TIGR00518 alaDH alanine dehydrogenase

Probab=96.89  E-value=0.008  Score=56.63  Aligned_cols=79  Identities=18%  Similarity=0.274  Sum_probs=56.6

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      .+.+.++.++|.|+ |.+|..+++.|...|++|++++|+.++++.+...+     +..   +..+..+.+.+.+.+.   
T Consensus       162 ~~~l~~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~-----g~~---v~~~~~~~~~l~~~l~---  229 (370)
T TIGR00518       162 VPGVEPGDVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRLRQLDAEF-----GGR---IHTRYSNAYEIEDAVK---  229 (370)
T ss_pred             CCCCCCceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhc-----Cce---eEeccCCHHHHHHHHc---
Confidence            56677888999986 79999999999999999999999987765544332     221   2234445555444332   


Q ss_pred             hcCCCccEEEEcccC
Q 019722          110 SLNLPLNLLINNAGK  124 (336)
Q Consensus       110 ~~~~~id~lv~nAg~  124 (336)
                          ..|++|+++++
T Consensus       230 ----~aDvVI~a~~~  240 (370)
T TIGR00518       230 ----RADLLIGAVLI  240 (370)
T ss_pred             ----cCCEEEEcccc
Confidence                57999998865

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=96.86  E-value=0.0057  Score=56.65  Aligned_cols=77  Identities=25%  Similarity=0.415  Sum_probs=51.3

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcC-C
Q 019722           35 SVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLN-L  113 (336)
Q Consensus        35 gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~-~  113 (336)
                      |.++||+||+||+|...++-+...|+.++++..+.++.+ .++++     +.... +  |..+.+    +.+++.+.. +
T Consensus       143 g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~-~~~~l-----GAd~v-i--~y~~~~----~~~~v~~~t~g  209 (326)
T COG0604         143 GETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLE-LLKEL-----GADHV-I--NYREED----FVEQVRELTGG  209 (326)
T ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHH-HHHhc-----CCCEE-E--cCCccc----HHHHHHHHcCC
Confidence            899999999999999999999999987777666666555 44433     32221 1  233333    333333322 2


Q ss_pred             -CccEEEEcccC
Q 019722          114 -PLNLLINNAGK  124 (336)
Q Consensus       114 -~id~lv~nAg~  124 (336)
                       ++|+++...|.
T Consensus       210 ~gvDvv~D~vG~  221 (326)
T COG0604         210 KGVDVVLDTVGG  221 (326)
T ss_pred             CCceEEEECCCH
Confidence             59999988873

>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase

Probab=96.85  E-value=0.0089  Score=54.23  Aligned_cols=80  Identities=20%  Similarity=0.362  Sum_probs=55.1

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCC
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNL  113 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  113 (336)
                      .+++++|+|+++++|.++++.+...|++|++++++.+..+.+ +++     +..   ...+..+......+.+.. . .+
T Consensus       139 ~~~~vlv~g~~~~ig~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~-----g~~---~~~~~~~~~~~~~~~~~~-~-~~  207 (323)
T cd05276         139 AGETVLIHGGASGVGTAAIQLAKALGARVIATAGSEEKLEAC-RAL-----GAD---VAINYRTEDFAEEVKEAT-G-GR  207 (323)
T ss_pred             CCCEEEEEcCcChHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HHc-----CCC---EEEeCCchhHHHHHHHHh-C-CC
Confidence            578999999999999999999999999999999987765543 322     222   123333333333333322 1 24


Q ss_pred             CccEEEEcccC
Q 019722          114 PLNLLINNAGK  124 (336)
Q Consensus       114 ~id~lv~nAg~  124 (336)
                      ++|++|+++|.
T Consensus       208 ~~d~vi~~~g~  218 (323)
T cd05276         208 GVDVILDMVGG  218 (323)
T ss_pred             CeEEEEECCch
Confidence            69999999883

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding

>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1

Probab=96.85  E-value=0.0086  Score=51.25  Aligned_cols=80  Identities=25%  Similarity=0.364  Sum_probs=58.1

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCC-------------------hHHHHHHHHHHHhhCCCCceEEEe
Q 019722           33 LSSVTAIITGATSGIGAETARVLAKRGA-RLVLPARS-------------------LKAAEEAKARLASDCPGSDIVVLP   92 (336)
Q Consensus        33 l~gk~~lItGgs~gIG~aia~~L~~~G~-~V~~~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~~~   92 (336)
                      +++++++|.| .+|+|.++++.|+..|. ++.+++.+                   ..+++.+.+.+++.+|..++....
T Consensus        19 L~~s~VlIiG-~gglG~evak~La~~GVg~i~lvD~d~ve~snL~rqfl~~~~diG~~Ka~a~~~~L~~lNp~v~i~~~~   97 (197)
T cd01492          19 LRSARILLIG-LKGLGAEIAKNLVLSGIGSLTILDDRTVTEEDLGAQFLIPAEDLGQNRAEASLERLRALNPRVKVSVDT   97 (197)
T ss_pred             HHhCcEEEEc-CCHHHHHHHHHHHHcCCCEEEEEECCcccHhhCCCCccccHHHcCchHHHHHHHHHHHHCCCCEEEEEe
Confidence            6778899997 56699999999999998 78888644                   135666777788888888888777


Q ss_pred             ccCCCHHHHHHHHHHHHhcCCCccEEEEcc
Q 019722           93 LDLSSLSSVRNFVSQFHSLNLPLNLLINNA  122 (336)
Q Consensus        93 ~Dl~~~~~v~~~~~~~~~~~~~id~lv~nA  122 (336)
                      ..+++  ....++       ...|++|.+.
T Consensus        98 ~~~~~--~~~~~~-------~~~dvVi~~~  118 (197)
T cd01492          98 DDISE--KPEEFF-------SQFDVVVATE  118 (197)
T ss_pred             cCccc--cHHHHH-------hCCCEEEECC
Confidence            66642  122222       3578888764

Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.

>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like

Probab=96.84  E-value=0.012  Score=50.29  Aligned_cols=82  Identities=24%  Similarity=0.351  Sum_probs=56.6

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCCh---------------------HHHHHHHHHHHhhCCCCceEE
Q 019722           33 LSSVTAIITGATSGIGAETARVLAKRGA-RLVLPARSL---------------------KAAEEAKARLASDCPGSDIVV   90 (336)
Q Consensus        33 l~gk~~lItGgs~gIG~aia~~L~~~G~-~V~~~~r~~---------------------~~~~~~~~~l~~~~~~~~~~~   90 (336)
                      +++.+++|.|+ ||+|.++++.|+..|. ++.+++.+.                     .+++.+.+.+++.+|+.++..
T Consensus        17 L~~s~VlviG~-gglGsevak~L~~~GVg~i~lvD~d~ve~snl~rq~~~~~~~~~iG~~Ka~~~~~~L~~lNp~v~i~~   95 (198)
T cd01485          17 LRSAKVLIIGA-GALGAEIAKNLVLAGIDSITIVDHRLVSTEDLGSNFFLDAEVSNSGMNRAAASYEFLQELNPNVKLSI   95 (198)
T ss_pred             HhhCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEECCcCChhcCcccEecccchhhcCchHHHHHHHHHHHHCCCCEEEE
Confidence            67788999975 5699999999999998 688886541                     244556667777777777777


Q ss_pred             EeccCCC-HHHHHHHHHHHHhcCCCccEEEEcc
Q 019722           91 LPLDLSS-LSSVRNFVSQFHSLNLPLNLLINNA  122 (336)
Q Consensus        91 ~~~Dl~~-~~~v~~~~~~~~~~~~~id~lv~nA  122 (336)
                      +..++.+ .+....++       ...|++|.+.
T Consensus        96 ~~~~~~~~~~~~~~~~-------~~~dvVi~~~  121 (198)
T cd01485          96 VEEDSLSNDSNIEEYL-------QKFTLVIATE  121 (198)
T ss_pred             EecccccchhhHHHHH-------hCCCEEEECC
Confidence            7766643 22233333       2568887653

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=96.83  E-value=0.025  Score=50.05  Aligned_cols=79  Identities=24%  Similarity=0.309  Sum_probs=53.1

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcC
Q 019722           33 LSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLN  112 (336)
Q Consensus        33 l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  112 (336)
                      ..|.+++|+|+++ +|.++++.+...|.+|+++.+++++.+.+ +++     +.. .+  .|..+......+.   ....
T Consensus       133 ~~~~~vli~g~~~-~G~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~-----g~~-~~--~~~~~~~~~~~~~---~~~~  199 (271)
T cd05188         133 KPGDTVLVLGAGG-VGLLAAQLAKAAGARVIVTDRSDEKLELA-KEL-----GAD-HV--IDYKEEDLEEELR---LTGG  199 (271)
T ss_pred             CCCCEEEEECCCH-HHHHHHHHHHHcCCeEEEEcCCHHHHHHH-HHh-----CCc-ee--ccCCcCCHHHHHH---HhcC
Confidence            3578999999998 99999999999999999999987665443 222     211 11  2333333333333   2223


Q ss_pred             CCccEEEEcccC
Q 019722          113 LPLNLLINNAGK  124 (336)
Q Consensus       113 ~~id~lv~nAg~  124 (336)
                      +.+|++|++++.
T Consensus       200 ~~~d~vi~~~~~  211 (271)
T cd05188         200 GGADVVIDAVGG  211 (271)
T ss_pred             CCCCEEEECCCC
Confidence            579999999874

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2

Probab=96.83  E-value=0.0089  Score=54.71  Aligned_cols=77  Identities=22%  Similarity=0.297  Sum_probs=53.6

Q ss_pred             EEEeCCCChHHHHHHHHHHHCCC-EEEEeeCC-------------------hHHHHHHHHHHHhhCCCCceEEEeccCCC
Q 019722           38 AIITGATSGIGAETARVLAKRGA-RLVLPARS-------------------LKAAEEAKARLASDCPGSDIVVLPLDLSS   97 (336)
Q Consensus        38 ~lItGgs~gIG~aia~~L~~~G~-~V~~~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~   97 (336)
                      ++|.| .||+|.++++.|+..|. ++.+++.+                   ..+++.+.+.+++.+|..++..+..++.+
T Consensus         2 VlIVG-aGGlG~EiaKnLal~Gvg~ItIvD~D~Ve~sNLnRQflf~~~dVGk~Kaevaa~~l~~lNp~v~V~~~~~~i~~   80 (312)
T cd01489           2 VLVVG-AGGIGCELLKNLVLTGFGEIHIIDLDTIDLSNLNRQFLFRKKHVGKSKAQVAKEAVLSFNPNVKIVAYHANIKD   80 (312)
T ss_pred             EEEEC-CCHHHHHHHHHHHHhcCCeEEEEcCCCcchhhcCcCccCChhHcCcHHHHHHHHHHHHHCCCCeEEEEeccCCC
Confidence            67887 59999999999999998 88887754                   23556666677776777777777777765


Q ss_pred             HHHHHHHHHHHHhcCCCccEEEEcc
Q 019722           98 LSSVRNFVSQFHSLNLPLNLLINNA  122 (336)
Q Consensus        98 ~~~v~~~~~~~~~~~~~id~lv~nA  122 (336)
                      ......++       ...|++|.+.
T Consensus        81 ~~~~~~f~-------~~~DvVv~a~   98 (312)
T cd01489          81 PDFNVEFF-------KQFDLVFNAL   98 (312)
T ss_pred             ccchHHHH-------hcCCEEEECC
Confidence            32222222       2567777654

UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=96.82  E-value=0.007  Score=52.94  Aligned_cols=74  Identities=24%  Similarity=0.253  Sum_probs=58.9

Q ss_pred             EEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCCCcc
Q 019722           37 TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLPLN  116 (336)
Q Consensus        37 ~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id  116 (336)
                      .++|.| .|-+|..+|+.|.++|++|+++.++++..++....      ...++++.+|.++++.+.++-      ....|
T Consensus         2 ~iiIiG-~G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~------~~~~~~v~gd~t~~~~L~~ag------i~~aD   68 (225)
T COG0569           2 KIIIIG-AGRVGRSVARELSEEGHNVVLIDRDEERVEEFLAD------ELDTHVVIGDATDEDVLEEAG------IDDAD   68 (225)
T ss_pred             EEEEEC-CcHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhh------hcceEEEEecCCCHHHHHhcC------CCcCC
Confidence            455665 78899999999999999999999999987764432      246889999999998887762      23678


Q ss_pred             EEEEccc
Q 019722          117 LLINNAG  123 (336)
Q Consensus       117 ~lv~nAg  123 (336)
                      ++|...|
T Consensus        69 ~vva~t~   75 (225)
T COG0569          69 AVVAATG   75 (225)
T ss_pred             EEEEeeC
Confidence            8887766

>PRK05086 malate dehydrogenase; Provisional

Probab=96.82  E-value=0.015  Score=53.44  Aligned_cols=118  Identities=16%  Similarity=0.128  Sum_probs=62.8

Q ss_pred             CEEEEeCCCChHHHHHHHHHHH-CC--CEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcC
Q 019722           36 VTAIITGATSGIGAETARVLAK-RG--ARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLN  112 (336)
Q Consensus        36 k~~lItGgs~gIG~aia~~L~~-~G--~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  112 (336)
                      +.++|.||+|++|.+++..|.. .+  ..+++++|++. .......+...  +....+.-++-.   ++.+.       .
T Consensus         1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~-~~g~alDl~~~--~~~~~i~~~~~~---d~~~~-------l   67 (312)
T PRK05086          1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPV-TPGVAVDLSHI--PTAVKIKGFSGE---DPTPA-------L   67 (312)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCC-CcceehhhhcC--CCCceEEEeCCC---CHHHH-------c
Confidence            4689999999999999998865 33  47888888743 21111112110  111111111111   11111       1


Q ss_pred             CCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCc
Q 019722          113 LPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSI  178 (336)
Q Consensus       113 ~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~  178 (336)
                      ...|++|.++|....+.    ..-.+.+..|..    .++.+.+.|.+...    .+.|+++|.+.
T Consensus        68 ~~~DiVIitaG~~~~~~----~~R~dll~~N~~----i~~~ii~~i~~~~~----~~ivivvsNP~  121 (312)
T PRK05086         68 EGADVVLISAGVARKPG----MDRSDLFNVNAG----IVKNLVEKVAKTCP----KACIGIITNPV  121 (312)
T ss_pred             CCCCEEEEcCCCCCCCC----CCHHHHHHHHHH----HHHHHHHHHHHhCC----CeEEEEccCch
Confidence            35899999999854432    122345555654    44555555555431    34555555554

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=96.82  E-value=0.0079  Score=55.77  Aligned_cols=80  Identities=16%  Similarity=0.292  Sum_probs=53.3

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCC
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNL  113 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  113 (336)
                      .|.+++|+||++++|.++++.+...|++|+.+.++.++.+.+.+.+     +.. .++  |..+.......+++...  +
T Consensus       151 ~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~~l-----Ga~-~vi--~~~~~~~~~~~i~~~~~--~  220 (338)
T cd08295         151 KGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLKNKL-----GFD-DAF--NYKEEPDLDAALKRYFP--N  220 (338)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc-----CCc-eeE--EcCCcccHHHHHHHhCC--C
Confidence            5789999999999999999988899999999999887765544323     322 122  22222222222333221  4


Q ss_pred             CccEEEEccc
Q 019722          114 PLNLLINNAG  123 (336)
Q Consensus       114 ~id~lv~nAg  123 (336)
                      ++|+++.+.|
T Consensus       221 gvd~v~d~~g  230 (338)
T cd08295         221 GIDIYFDNVG  230 (338)
T ss_pred             CcEEEEECCC
Confidence            6999998876

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=96.80  E-value=0.0094  Score=55.69  Aligned_cols=80  Identities=15%  Similarity=0.286  Sum_probs=53.2

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCC
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNL  113 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  113 (336)
                      .|.+++|.|++|++|..+++.+...|++|+.++++.++.+.+.+++     +... ++  |..+.......+.+...  +
T Consensus       158 ~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~~~l-----Ga~~-vi--~~~~~~~~~~~i~~~~~--~  227 (348)
T PLN03154        158 KGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL-----GFDE-AF--NYKEEPDLDAALKRYFP--E  227 (348)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhc-----CCCE-EE--ECCCcccHHHHHHHHCC--C
Confidence            5789999999999999999988899999999998887755443233     3221 22  22222122232333221  3


Q ss_pred             CccEEEEccc
Q 019722          114 PLNLLINNAG  123 (336)
Q Consensus       114 ~id~lv~nAg  123 (336)
                      ++|+++.+.|
T Consensus       228 gvD~v~d~vG  237 (348)
T PLN03154        228 GIDIYFDNVG  237 (348)
T ss_pred             CcEEEEECCC
Confidence            6999998877

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=96.77  E-value=0.0082  Score=54.50  Aligned_cols=43  Identities=23%  Similarity=0.319  Sum_probs=38.3

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHH
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEE   74 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~   74 (336)
                      .+++||+++|.|. |++|.++++.|...|++|+++.|+.++...
T Consensus       147 ~~l~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~~~~  189 (287)
T TIGR02853       147 FTIHGSNVMVLGF-GRTGMTIARTFSALGARVFVGARSSADLAR  189 (287)
T ss_pred             CCCCCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence            4789999999997 779999999999999999999999876543

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=96.76  E-value=0.01  Score=54.41  Aligned_cols=75  Identities=25%  Similarity=0.347  Sum_probs=51.3

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCC
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNL  113 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  113 (336)
                      .+.+++|+||++++|.++++.+...|.+|+.+.+++++.+.+ ..   .  +.. .++  |..   .   +.+.+.+ ..
T Consensus       162 ~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~---~--~~~-~~~--~~~---~---~~~~~~~-~~  225 (332)
T cd08259         162 KGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKIL-KE---L--GAD-YVI--DGS---K---FSEDVKK-LG  225 (332)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHH-HH---c--CCc-EEE--ecH---H---HHHHHHh-cc
Confidence            478999999999999999999999999999999887665443 22   1  221 112  221   1   2222222 23


Q ss_pred             CccEEEEcccC
Q 019722          114 PLNLLINNAGK  124 (336)
Q Consensus       114 ~id~lv~nAg~  124 (336)
                      ++|++++++|.
T Consensus       226 ~~d~v~~~~g~  236 (332)
T cd08259         226 GADVVIELVGS  236 (332)
T ss_pred             CCCEEEECCCh
Confidence            79999999874

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>cd08293 PTGR2 Prostaglandin reductase

Probab=96.76  E-value=0.0095  Score=55.27  Aligned_cols=78  Identities=19%  Similarity=0.285  Sum_probs=52.3

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCC
Q 019722           35 SVTAIITGATSGIGAETARVLAKRGA-RLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNL  113 (336)
Q Consensus        35 gk~~lItGgs~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  113 (336)
                      |.++||+||+|++|.++++.+...|+ +|+.+.+++++.+.+.+++     +... ++  |..+. ...+.++++..  +
T Consensus       155 ~~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~l-----Ga~~-vi--~~~~~-~~~~~i~~~~~--~  223 (345)
T cd08293         155 NQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSEL-----GFDA-AI--NYKTD-NVAERLRELCP--E  223 (345)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhc-----CCcE-EE--ECCCC-CHHHHHHHHCC--C
Confidence            38999999999999999988888998 8999999887765554433     3222 22  22222 22222333322  4


Q ss_pred             CccEEEEccc
Q 019722          114 PLNLLINNAG  123 (336)
Q Consensus       114 ~id~lv~nAg  123 (336)
                      ++|+++.+.|
T Consensus       224 gvd~vid~~g  233 (345)
T cd08293         224 GVDVYFDNVG  233 (345)
T ss_pred             CceEEEECCC
Confidence            6999998877

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional

Probab=96.75  E-value=0.0049  Score=59.43  Aligned_cols=79  Identities=16%  Similarity=0.146  Sum_probs=54.7

Q ss_pred             CCCCCCEEEEeCC----------------CChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEecc
Q 019722           31 PNLSSVTAIITGA----------------TSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLD   94 (336)
Q Consensus        31 ~~l~gk~~lItGg----------------s~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D   94 (336)
                      .+|+||.+|||+|                ||-.|.+||+++..+|++|.++.-... +         . +...+.++.+ 
T Consensus       252 ~~l~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~VtlI~Gp~~-~---------~-~p~~v~~i~V-  319 (475)
T PRK13982        252 KPLAGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAEVTLISGPVD-L---------A-DPQGVKVIHV-  319 (475)
T ss_pred             cccCCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCcEEEEeCCcC-C---------C-CCCCceEEEe-
Confidence            3699999999998                568999999999999999998874321 0         0 1334555543 


Q ss_pred             CCCHHHHHHHHHHHHhcCCCccEEEEcccCCC
Q 019722           95 LSSLSSVRNFVSQFHSLNLPLNLLINNAGKFA  126 (336)
Q Consensus        95 l~~~~~v~~~~~~~~~~~~~id~lv~nAg~~~  126 (336)
                       .+..+..+   .+.+.+. .|++|++|++..
T Consensus       320 -~ta~eM~~---av~~~~~-~Di~I~aAAVaD  346 (475)
T PRK13982        320 -ESARQMLA---AVEAALP-ADIAIFAAAVAD  346 (475)
T ss_pred             -cCHHHHHH---HHHhhCC-CCEEEEeccccc
Confidence             33344444   4433343 699999999654

>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A

Probab=96.73  E-value=0.0022  Score=45.02  Aligned_cols=34  Identities=21%  Similarity=0.319  Sum_probs=22.8

Q ss_pred             CC-CEEEEeCCCChHHHH--HHHHHHHCCCEEEEeeCC
Q 019722           34 SS-VTAIITGATSGIGAE--TARVLAKRGARLVLPARS   68 (336)
Q Consensus        34 ~g-k~~lItGgs~gIG~a--ia~~L~~~G~~V~~~~r~   68 (336)
                      .| |+|||+|+|+|.|++  |+..| ..|++.+-+...
T Consensus        37 ~GpK~VLViGaStGyGLAsRIa~aF-g~gA~TiGV~fE   73 (78)
T PF12242_consen   37 NGPKKVLVIGASTGYGLASRIAAAF-GAGADTIGVSFE   73 (78)
T ss_dssp             TS-SEEEEES-SSHHHHHHHHHHHH-CC--EEEEEE--
T ss_pred             CCCceEEEEecCCcccHHHHHHHHh-cCCCCEEEEeec
Confidence            44 899999999999999  55555 667777766654

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=96.66  E-value=0.01  Score=54.61  Aligned_cols=79  Identities=16%  Similarity=0.303  Sum_probs=53.2

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCC
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNL  113 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  113 (336)
                      .|.++||+||++++|..+++.+...|++|+.+.++.++.+.+ +++     +... ++  |..+.+...+..+.+..  +
T Consensus       138 ~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~-~~l-----Ga~~-vi--~~~~~~~~~~~~~~~~~--~  206 (325)
T TIGR02825       138 GGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYL-KKL-----GFDV-AF--NYKTVKSLEETLKKASP--D  206 (325)
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHc-----CCCE-EE--eccccccHHHHHHHhCC--C
Confidence            578999999999999999998888999999999987765544 322     3322 22  22222233333333321  3


Q ss_pred             CccEEEEccc
Q 019722          114 PLNLLINNAG  123 (336)
Q Consensus       114 ~id~lv~nAg  123 (336)
                      ++|+++.+.|
T Consensus       207 gvdvv~d~~G  216 (325)
T TIGR02825       207 GYDCYFDNVG  216 (325)
T ss_pred             CeEEEEECCC
Confidence            6999998876

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>cd01484 E1-2_like Ubiquitin activating enzyme (E1), repeat 2-like

Probab=96.62  E-value=0.02  Score=50.23  Aligned_cols=77  Identities=18%  Similarity=0.291  Sum_probs=53.3

Q ss_pred             EEEeCCCChHHHHHHHHHHHCCC-EEEEeeCC-------------------hHHHHHHHHHHHhhCCCCceEEEeccCCC
Q 019722           38 AIITGATSGIGAETARVLAKRGA-RLVLPARS-------------------LKAAEEAKARLASDCPGSDIVVLPLDLSS   97 (336)
Q Consensus        38 ~lItGgs~gIG~aia~~L~~~G~-~V~~~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~   97 (336)
                      ++|.| .||+|.++++.|+..|. ++.+++.+                   ..+++.+.+.+++.+|+.++..+..++.+
T Consensus         2 VlvvG-~GGlG~eilk~La~~Gvg~i~ivD~D~Ve~sNLnRQflf~~~dvGk~Ka~va~~~l~~~np~v~i~~~~~~i~~   80 (234)
T cd01484           2 VLLVG-AGGIGCELLKNLALMGFGQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKSEVAAEAVNDRNPNCKVVPYQNKVGP   80 (234)
T ss_pred             EEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCEEcchhhccccCCChhhCChHHHHHHHHHHHHHCCCCEEEEEeccCCh
Confidence            56776 88999999999999998 88887755                   23555566677777777777777777754


Q ss_pred             HHHH-HHHHHHHHhcCCCccEEEEcc
Q 019722           98 LSSV-RNFVSQFHSLNLPLNLLINNA  122 (336)
Q Consensus        98 ~~~v-~~~~~~~~~~~~~id~lv~nA  122 (336)
                      .... ..+       +...|++|.+.
T Consensus        81 ~~~~~~~f-------~~~~DvVi~a~   99 (234)
T cd01484          81 EQDFNDTF-------FEQFHIIVNAL   99 (234)
T ss_pred             hhhchHHH-------HhCCCEEEECC
Confidence            3221 112       23578877654

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homologou

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=96.62  E-value=0.01  Score=55.28  Aligned_cols=80  Identities=18%  Similarity=0.245  Sum_probs=54.0

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcC
Q 019722           33 LSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLN  112 (336)
Q Consensus        33 l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  112 (336)
                      -+|+.+||.||+||+|.+.++-+...|+..+++.++.++.+ +.+++     + .-  ...|..+++-++.+.+..   .
T Consensus       156 ~~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~~-l~k~l-----G-Ad--~vvdy~~~~~~e~~kk~~---~  223 (347)
T KOG1198|consen  156 SKGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEKLE-LVKKL-----G-AD--EVVDYKDENVVELIKKYT---G  223 (347)
T ss_pred             CCCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccchHH-HHHHc-----C-Cc--EeecCCCHHHHHHHHhhc---C
Confidence            47889999999999999999999999955555555544433 33433     2 11  334666644444444332   4


Q ss_pred             CCccEEEEcccC
Q 019722          113 LPLNLLINNAGK  124 (336)
Q Consensus       113 ~~id~lv~nAg~  124 (336)
                      +++|+++-|.|-
T Consensus       224 ~~~DvVlD~vg~  235 (347)
T KOG1198|consen  224 KGVDVVLDCVGG  235 (347)
T ss_pred             CCccEEEECCCC
Confidence            589999999985

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=96.60  E-value=0.015  Score=55.92  Aligned_cols=74  Identities=24%  Similarity=0.487  Sum_probs=53.9

Q ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHh
Q 019722           32 NLSSVTAIITGATSGIGAETARVLAKRGA-RLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHS  110 (336)
Q Consensus        32 ~l~gk~~lItGgs~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  110 (336)
                      ++.|++++|.|+ |.+|..+++.|...|+ +|++++|+.+++....+++     +..  ++     +.++....+     
T Consensus       179 ~~~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~-----g~~--~~-----~~~~~~~~l-----  240 (423)
T PRK00045        179 DLSGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLERAEELAEEF-----GGE--AI-----PLDELPEAL-----  240 (423)
T ss_pred             CccCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHc-----CCc--Ee-----eHHHHHHHh-----
Confidence            588999999985 9999999999999997 8999999998877666553     211  11     122232222     


Q ss_pred             cCCCccEEEEcccCC
Q 019722          111 LNLPLNLLINNAGKF  125 (336)
Q Consensus       111 ~~~~id~lv~nAg~~  125 (336)
                        ...|++|.+.|..
T Consensus       241 --~~aDvVI~aT~s~  253 (423)
T PRK00045        241 --AEADIVISSTGAP  253 (423)
T ss_pred             --ccCCEEEECCCCC
Confidence              2579999998753

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=96.59  E-value=0.0053  Score=54.65  Aligned_cols=74  Identities=12%  Similarity=0.259  Sum_probs=54.0

Q ss_pred             EEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCCCcc
Q 019722           37 TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLPLN  116 (336)
Q Consensus        37 ~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id  116 (336)
                      .++|+|||+- |+.+++.|.++|++|+...++....+....        .....+..+..+..++..++++     .++|
T Consensus         2 ~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~~~~~--------~g~~~v~~g~l~~~~l~~~l~~-----~~i~   67 (256)
T TIGR00715         2 TVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGKHLYPI--------HQALTVHTGALDPQELREFLKR-----HSID   67 (256)
T ss_pred             eEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCccccccc--------cCCceEEECCCCHHHHHHHHHh-----cCCC
Confidence            6899999998 999999999999999999988764433221        1122344566677776666653     2799


Q ss_pred             EEEEcccC
Q 019722          117 LLINNAGK  124 (336)
Q Consensus       117 ~lv~nAg~  124 (336)
                      +||..+..
T Consensus        68 ~VIDAtHP   75 (256)
T TIGR00715        68 ILVDATHP   75 (256)
T ss_pred             EEEEcCCH
Confidence            99998864

This enzyme was found to be a monomer by gel filtration.

>PRK14851 hypothetical protein; Provisional

Probab=96.57  E-value=0.019  Score=58.20  Aligned_cols=82  Identities=16%  Similarity=0.297  Sum_probs=62.2

Q ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCC-------------------hHHHHHHHHHHHhhCCCCceEEE
Q 019722           32 NLSSVTAIITGATSGIGAETARVLAKRGA-RLVLPARS-------------------LKAAEEAKARLASDCPGSDIVVL   91 (336)
Q Consensus        32 ~l~gk~~lItGgs~gIG~aia~~L~~~G~-~V~~~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~~   91 (336)
                      .+++++|+|.| .||+|..++..|+..|. ++.+++.+                   ..+.+.+.+.+++.+|..++..+
T Consensus        40 kL~~~~VlIvG-~GGlGs~va~~Lar~GVG~l~LvD~D~ve~sNLNRQ~~~~~~dvG~~Kv~v~~~~l~~inP~~~I~~~  118 (679)
T PRK14851         40 RLAEAKVAIPG-MGGVGGVHLITMVRTGIGRFHIADFDQFEPVNVNRQFGARVPSFGRPKLAVMKEQALSINPFLEITPF  118 (679)
T ss_pred             HHhcCeEEEEC-cCHHHHHHHHHHHHhCCCeEEEEcCCEecccccccCcCcChhhCCCHHHHHHHHHHHHhCCCCeEEEE
Confidence            36889999998 78999999999999998 88887644                   23566677778888888888888


Q ss_pred             eccCCCHHHHHHHHHHHHhcCCCccEEEEcc
Q 019722           92 PLDLSSLSSVRNFVSQFHSLNLPLNLLINNA  122 (336)
Q Consensus        92 ~~Dl~~~~~v~~~~~~~~~~~~~id~lv~nA  122 (336)
                      ...++ .+.+..+++       ..|+||.+.
T Consensus       119 ~~~i~-~~n~~~~l~-------~~DvVid~~  141 (679)
T PRK14851        119 PAGIN-ADNMDAFLD-------GVDVVLDGL  141 (679)
T ss_pred             ecCCC-hHHHHHHHh-------CCCEEEECC
Confidence            88885 344444443       567777554

>PRK07411 hypothetical protein; Validated

Probab=96.53  E-value=0.019  Score=54.45  Aligned_cols=82  Identities=22%  Similarity=0.338  Sum_probs=60.7

Q ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCC-------------------hHHHHHHHHHHHhhCCCCceEEE
Q 019722           32 NLSSVTAIITGATSGIGAETARVLAKRGA-RLVLPARS-------------------LKAAEEAKARLASDCPGSDIVVL   91 (336)
Q Consensus        32 ~l~gk~~lItGgs~gIG~aia~~L~~~G~-~V~~~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~~   91 (336)
                      .|++.+|+|.| .||+|..+++.|+..|. ++.+++.+                   ..+++.+.+.+++.+|..++..+
T Consensus        35 ~L~~~~VlivG-~GGlG~~va~~La~~Gvg~l~lvD~D~ve~sNL~RQ~l~~~~dvG~~Ka~~a~~~l~~~np~v~v~~~  113 (390)
T PRK07411         35 RLKAASVLCIG-TGGLGSPLLLYLAAAGIGRIGIVDFDVVDSSNLQRQVIHGTSWVGKPKIESAKNRILEINPYCQVDLY  113 (390)
T ss_pred             HHhcCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCEecccccCcCcccChHHCCCcHHHHHHHHHHHHCCCCeEEEE
Confidence            47788999998 67999999999999998 88887654                   23666778888888888888888


Q ss_pred             eccCCCHHHHHHHHHHHHhcCCCccEEEEcc
Q 019722           92 PLDLSSLSSVRNFVSQFHSLNLPLNLLINNA  122 (336)
Q Consensus        92 ~~Dl~~~~~v~~~~~~~~~~~~~id~lv~nA  122 (336)
                      ...++.. ....++.       ..|++|.+.
T Consensus       114 ~~~~~~~-~~~~~~~-------~~D~Vvd~~  136 (390)
T PRK07411        114 ETRLSSE-NALDILA-------PYDVVVDGT  136 (390)
T ss_pred             ecccCHH-hHHHHHh-------CCCEEEECC
Confidence            8777643 2222222       457776664

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=96.51  E-value=0.0081  Score=49.95  Aligned_cols=39  Identities=18%  Similarity=0.292  Sum_probs=35.7

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCCh
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSL   69 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~   69 (336)
                      .++.||+++|.|++.-+|..+++.|.++|++|.++.|+.
T Consensus        40 ~~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~   78 (168)
T cd01080          40 IDLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKT   78 (168)
T ss_pred             CCCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCc
Confidence            579999999999977789999999999999999999874

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=96.51  E-value=0.02  Score=52.73  Aligned_cols=73  Identities=25%  Similarity=0.473  Sum_probs=53.5

Q ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHh
Q 019722           32 NLSSVTAIITGATSGIGAETARVLAKRGA-RLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHS  110 (336)
Q Consensus        32 ~l~gk~~lItGgs~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  110 (336)
                      ++.+++++|.|+ |.+|..+++.|...|. +|++++|+.++..++.+++     +.  .++     +.+++...+.    
T Consensus       175 ~l~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~~-----g~--~~~-----~~~~~~~~l~----  237 (311)
T cd05213         175 NLKGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERAEELAKEL-----GG--NAV-----PLDELLELLN----  237 (311)
T ss_pred             CccCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHc-----CC--eEE-----eHHHHHHHHh----
Confidence            478999999986 9999999999999775 8999999998877766654     22  122     2223333322    


Q ss_pred             cCCCccEEEEcccC
Q 019722          111 LNLPLNLLINNAGK  124 (336)
Q Consensus       111 ~~~~id~lv~nAg~  124 (336)
                         ..|++|.+.+.
T Consensus       238 ---~aDvVi~at~~  248 (311)
T cd05213         238 ---EADVVISATGA  248 (311)
T ss_pred             ---cCCEEEECCCC
Confidence               47999999885

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=96.45  E-value=0.021  Score=54.72  Aligned_cols=75  Identities=20%  Similarity=0.488  Sum_probs=54.4

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCC-CEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRG-ARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      .++.|++++|.|+ |.+|..+++.|...| .+|++++|+.+++.+..+.+     +..  .+..     +++...+.   
T Consensus       176 ~~l~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~-----g~~--~i~~-----~~l~~~l~---  239 (417)
T TIGR01035       176 GSLKGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAEDLAKEL-----GGE--AVKF-----EDLEEYLA---  239 (417)
T ss_pred             CCccCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHc-----CCe--EeeH-----HHHHHHHh---
Confidence            3588999999996 999999999999999 58999999988776665543     211  2221     23333332   


Q ss_pred             hcCCCccEEEEcccCC
Q 019722          110 SLNLPLNLLINNAGKF  125 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~  125 (336)
                          ..|++|.+.+..
T Consensus       240 ----~aDvVi~aT~s~  251 (417)
T TIGR01035       240 ----EADIVISSTGAP  251 (417)
T ss_pred             ----hCCEEEECCCCC
Confidence                579999997753

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated

Probab=96.43  E-value=0.027  Score=53.50  Aligned_cols=81  Identities=19%  Similarity=0.313  Sum_probs=57.4

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCC-------------------hHHHHHHHHHHHhhCCCCceEEEe
Q 019722           33 LSSVTAIITGATSGIGAETARVLAKRGA-RLVLPARS-------------------LKAAEEAKARLASDCPGSDIVVLP   92 (336)
Q Consensus        33 l~gk~~lItGgs~gIG~aia~~L~~~G~-~V~~~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~~~   92 (336)
                      |.+.+|+|.| .||+|..+++.|+..|. ++.+++.+                   ..+++.+.+.+++.+|..++..+.
T Consensus        40 L~~~~VlviG-~GGlGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~i~~~~  118 (392)
T PRK07878         40 LKNARVLVIG-AGGLGSPTLLYLAAAGVGTLGIVEFDVVDESNLQRQVIHGQSDVGRSKAQSARDSIVEINPLVNVRLHE  118 (392)
T ss_pred             HhcCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCCEecCcccccccccChhcCCChHHHHHHHHHHHhCCCcEEEEEe
Confidence            5788899998 68999999999999998 88887654                   135566677777777777777777


Q ss_pred             ccCCCHHHHHHHHHHHHhcCCCccEEEEcc
Q 019722           93 LDLSSLSSVRNFVSQFHSLNLPLNLLINNA  122 (336)
Q Consensus        93 ~Dl~~~~~v~~~~~~~~~~~~~id~lv~nA  122 (336)
                      ..++.. .+..+++       ..|++|.+.
T Consensus       119 ~~i~~~-~~~~~~~-------~~D~Vvd~~  140 (392)
T PRK07878        119 FRLDPS-NAVELFS-------QYDLILDGT  140 (392)
T ss_pred             ccCChh-HHHHHHh-------cCCEEEECC
Confidence            666532 2333332       467776554

>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family

Probab=96.40  E-value=0.038  Score=49.48  Aligned_cols=119  Identities=17%  Similarity=0.091  Sum_probs=73.2

Q ss_pred             EEEeCCCChHHHHHHHHHHHCC----CEEEEeeCChHHHHHHHHHHHhhCCCC-ceEEEeccCCCHHHHHHHHHHHHhcC
Q 019722           38 AIITGATSGIGAETARVLAKRG----ARLVLPARSLKAAEEAKARLASDCPGS-DIVVLPLDLSSLSSVRNFVSQFHSLN  112 (336)
Q Consensus        38 ~lItGgs~gIG~aia~~L~~~G----~~V~~~~r~~~~~~~~~~~l~~~~~~~-~~~~~~~Dl~~~~~v~~~~~~~~~~~  112 (336)
                      +.|+||+|.+|..++..|+..|    .+|+++++++++++.....++...... ...+..  -+|   ....+       
T Consensus         1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~~~~~~i~~--~~d---~~~~~-------   68 (263)
T cd00650           1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEPLADIKVSI--TDD---PYEAF-------   68 (263)
T ss_pred             CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhhhhccCcEEEE--CCc---hHHHh-------
Confidence            4689998899999999999999    689999999887777666665432111 111111  111   12222       


Q ss_pred             CCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccc
Q 019722          113 LPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHS  180 (336)
Q Consensus       113 ~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~  180 (336)
                      ...|++|..+|.....   .+.. ...+.    ....+.+...+.+.+..    +.+.+|++|.+...
T Consensus        69 ~~aDiVv~t~~~~~~~---g~~r-~~~~~----~n~~i~~~i~~~i~~~~----p~a~~i~~tNP~d~  124 (263)
T cd00650          69 KDADVVIITAGVGRKP---GMGR-LDLLK----RNVPIVKEIGDNIEKYS----PDAWIIVVSNPVDI  124 (263)
T ss_pred             CCCCEEEECCCCCCCc---CCCH-HHHHH----HHHHHHHHHHHHHHHHC----CCeEEEEecCcHHH
Confidence            2689999999975443   1111 12222    23446666666666543    25788888776543

Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains

>cd01488 Uba3_RUB Ubiquitin activating enzyme (E1) subunit UBA3

Probab=96.37  E-value=0.032  Score=50.52  Aligned_cols=75  Identities=20%  Similarity=0.290  Sum_probs=55.1

Q ss_pred             EEEeCCCChHHHHHHHHHHHCCC-EEEEeeCC-------------------hHHHHHHHHHHHhhCCCCceEEEeccCCC
Q 019722           38 AIITGATSGIGAETARVLAKRGA-RLVLPARS-------------------LKAAEEAKARLASDCPGSDIVVLPLDLSS   97 (336)
Q Consensus        38 ~lItGgs~gIG~aia~~L~~~G~-~V~~~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~   97 (336)
                      ++|.| .||+|.++++.|+..|. ++.+++.+                   ..+++.+.+.+++.+|+.++..+..++.+
T Consensus         2 VlVVG-aGGlG~eilknLal~Gvg~I~IvD~D~Ve~SNLnRQfLf~~~dIGk~KAevaa~~l~~~np~v~I~~~~~~i~~   80 (291)
T cd01488           2 ILVIG-AGGLGCELLKNLALSGFRNIHVIDMDTIDVSNLNRQFLFREKDIGKPKAEVAAKFVNDRVPGVNVTPHFGKIQD   80 (291)
T ss_pred             EEEEC-CCHHHHHHHHHHHHcCCCeEEEECCCEecccccCcCcccChHHcchHHHHHHHHHHHHHCCCCEEEEEecccCc
Confidence            67776 78999999999999998 88887643                   24666677777777888888888877764


Q ss_pred             HHHHHHHHHHHHhcCCCccEEEEcc
Q 019722           98 LSSVRNFVSQFHSLNLPLNLLINNA  122 (336)
Q Consensus        98 ~~~v~~~~~~~~~~~~~id~lv~nA  122 (336)
                      ..  ..+       +...|++|.+.
T Consensus        81 ~~--~~f-------~~~fdvVi~al   96 (291)
T cd01488          81 KD--EEF-------YRQFNIIICGL   96 (291)
T ss_pred             hh--HHH-------hcCCCEEEECC
Confidence            32  122       23678887754

UBA3 is part of the heterodimeric activating enzyme (E1), specific for the Rub family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins. consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin(-like) by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by Rub family of ubiquitin-like proteins (Ublps) activates SCF ubiquitin ligases and is involved in cell cycle control, signaling and embryogenesis. UBA3 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.

>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]

Probab=96.36  E-value=0.027  Score=53.31  Aligned_cols=74  Identities=20%  Similarity=0.402  Sum_probs=55.8

Q ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHh
Q 019722           32 NLSSVTAIITGATSGIGAETARVLAKRGA-RLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHS  110 (336)
Q Consensus        32 ~l~gk~~lItGgs~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  110 (336)
                      ++++|++||.| .|-+|.-++++|+++|. +|+++.|+.+++.++++++.            ++....+.+...+.    
T Consensus       175 ~L~~~~vlvIG-AGem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~------------~~~~~l~el~~~l~----  237 (414)
T COG0373         175 SLKDKKVLVIG-AGEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLG------------AEAVALEELLEALA----  237 (414)
T ss_pred             ccccCeEEEEc-ccHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhC------------CeeecHHHHHHhhh----
Confidence            48999999999 56799999999999995 89999999999999888763            22223334433333    


Q ss_pred             cCCCccEEEEcccCC
Q 019722          111 LNLPLNLLINNAGKF  125 (336)
Q Consensus       111 ~~~~id~lv~nAg~~  125 (336)
                         ..|++|.+.|..
T Consensus       238 ---~~DvVissTsa~  249 (414)
T COG0373         238 ---EADVVISSTSAP  249 (414)
T ss_pred             ---hCCEEEEecCCC
Confidence               568888777653

>TIGR01381 E1_like_apg7 E1-like protein-activating enzyme Gsa7p/Apg7p

Probab=96.36  E-value=0.016  Score=57.60  Aligned_cols=62  Identities=21%  Similarity=0.293  Sum_probs=47.8

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCC----------------------hHHHHHHHHHHHhhCCCCceE
Q 019722           33 LSSVTAIITGATSGIGAETARVLAKRGA-RLVLPARS----------------------LKAAEEAKARLASDCPGSDIV   89 (336)
Q Consensus        33 l~gk~~lItGgs~gIG~aia~~L~~~G~-~V~~~~r~----------------------~~~~~~~~~~l~~~~~~~~~~   89 (336)
                      +++.+|+|.| .||+|..+++.|+..|. ++++++.+                      ..+++.+.+.+++.+|+.++.
T Consensus       336 L~~~kVLIvG-aGGLGs~VA~~La~~GVg~ItlVD~D~Ve~SNL~RQ~Lf~~~Dv~~~Gk~KA~aAa~~Lk~InP~v~i~  414 (664)
T TIGR01381       336 YSQLKVLLLG-AGTLGCNVARCLIGWGVRHITFVDNGKVSYSNPVRQSLSNFEDCLLGGRGKAETAQKALKRIFPSIQAT  414 (664)
T ss_pred             HhcCeEEEEC-CcHHHHHHHHHHHHcCCCeEEEEcCCEECCCccccccccchhhhhhcCCcHHHHHHHHHHHHCCCcEEE
Confidence            5788999998 78999999999999998 88887644                      124455667777777777777


Q ss_pred             EEeccC
Q 019722           90 VLPLDL   95 (336)
Q Consensus        90 ~~~~Dl   95 (336)
                      .+...+
T Consensus       415 ~~~~~I  420 (664)
T TIGR01381       415 GHRLTV  420 (664)
T ss_pred             Eeeeee
Confidence            776553

This model represents a family of eukaryotic proteins found in animals, plants, and yeasts, including Apg7p (YHR171W) from Saccharomyces cerevisiae and GSA7 from Pichia pastoris. Members are about 650 to 700 residues in length and include a central domain of about 150 residues shared with the ThiF/MoeB/HesA family of proteins. A low level of similarity to ubiquitin-activating enzyme E1 is described in a paper on peroxisome autophagy mediated by GSA7, and is the basis of the name ubiquitin activating enzyme E1-like protein. Members of the family appear to be involved in protein lipidation events analogous to ubiquitination and required for membrane fusion events during autophagy.

>PLN00203 glutamyl-tRNA reductase

Probab=96.35  E-value=0.026  Score=55.41  Aligned_cols=78  Identities=15%  Similarity=0.321  Sum_probs=56.0

Q ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHh
Q 019722           32 NLSSVTAIITGATSGIGAETARVLAKRGA-RLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHS  110 (336)
Q Consensus        32 ~l~gk~~lItGgs~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  110 (336)
                      ++.+++++|.|+ |.+|..+++.|...|. +|+++.|+.++++.+.+++.    +..+.+..  +   ++...++.    
T Consensus       263 ~l~~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~----g~~i~~~~--~---~dl~~al~----  328 (519)
T PLN00203        263 SHASARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFP----DVEIIYKP--L---DEMLACAA----  328 (519)
T ss_pred             CCCCCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhC----CCceEeec--H---hhHHHHHh----
Confidence            588999999997 9999999999999997 79999999988877665542    22222222  1   22333332    


Q ss_pred             cCCCccEEEEcccCCC
Q 019722          111 LNLPLNLLINNAGKFA  126 (336)
Q Consensus       111 ~~~~id~lv~nAg~~~  126 (336)
                         ..|+||.+.+...
T Consensus       329 ---~aDVVIsAT~s~~  341 (519)
T PLN00203        329 ---EADVVFTSTSSET  341 (519)
T ss_pred             ---cCCEEEEccCCCC
Confidence               5799998876543

>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family

Probab=96.34  E-value=0.029  Score=51.04  Aligned_cols=79  Identities=23%  Similarity=0.360  Sum_probs=53.1

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCC
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNL  113 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  113 (336)
                      .|++++|+|+++++|.+++..+...|++|+++.++++..+.+ .++     +.+..   .+....+....+.+.. . ..
T Consensus       139 ~~~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~-----g~~~~---~~~~~~~~~~~~~~~~-~-~~  207 (325)
T TIGR02824       139 AGETVLIHGGASGIGTTAIQLAKAFGARVFTTAGSDEKCAAC-EAL-----GADIA---INYREEDFVEVVKAET-G-GK  207 (325)
T ss_pred             CCCEEEEEcCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHc-----CCcEE---EecCchhHHHHHHHHc-C-CC
Confidence            578999999999999999999999999999999987765432 222     22211   2233333333333222 1 13


Q ss_pred             CccEEEEccc
Q 019722          114 PLNLLINNAG  123 (336)
Q Consensus       114 ~id~lv~nAg  123 (336)
                      ++|++|+++|
T Consensus       208 ~~d~~i~~~~  217 (325)
T TIGR02824       208 GVDVILDIVG  217 (325)
T ss_pred             CeEEEEECCc
Confidence            5999999887

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.

>PLN02602 lactate dehydrogenase

Probab=96.34  E-value=0.16  Score=47.38  Aligned_cols=119  Identities=13%  Similarity=0.118  Sum_probs=75.2

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHCCC--EEEEeeCChHHHHHHHHHHHhhCCC-CceEEEeccCCCHHHHHHHHHHHHhcC
Q 019722           36 VTAIITGATSGIGAETARVLAKRGA--RLVLPARSLKAAEEAKARLASDCPG-SDIVVLPLDLSSLSSVRNFVSQFHSLN  112 (336)
Q Consensus        36 k~~lItGgs~gIG~aia~~L~~~G~--~V~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~~Dl~~~~~v~~~~~~~~~~~  112 (336)
                      +.+.|+|+ |.+|.+++..|+.++.  ++++++.+++.++-....+....+- ....+ ... .+.       +.    +
T Consensus        38 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~LiDi~~~~~~g~a~DL~~~~~~~~~~~i-~~~-~dy-------~~----~  103 (350)
T PLN02602         38 TKVSVVGV-GNVGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQHAAAFLPRTKI-LAS-TDY-------AV----T  103 (350)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCCchhhHHHHHHHhhhhcCCCCEE-EeC-CCH-------HH----h
Confidence            58999995 9999999999999885  7999999887776666666543210 11222 211 111       11    2


Q ss_pred             CCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccc
Q 019722          113 LPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHS  180 (336)
Q Consensus       113 ~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~  180 (336)
                      ..-|++|..||....+ ..+.   .+.+..|    ..+++.+.+.+.+..    +.+.+|++|.+...
T Consensus       104 ~daDiVVitAG~~~k~-g~tR---~dll~~N----~~I~~~i~~~I~~~~----p~~ivivvtNPvdv  159 (350)
T PLN02602        104 AGSDLCIVTAGARQIP-GESR---LNLLQRN----VALFRKIIPELAKYS----PDTILLIVSNPVDV  159 (350)
T ss_pred             CCCCEEEECCCCCCCc-CCCH---HHHHHHH----HHHHHHHHHHHHHHC----CCeEEEEecCchHH
Confidence            3679999999975432 1222   2333333    456677777776653    35788888876543

>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed

Probab=96.30  E-value=0.011  Score=57.59  Aligned_cols=47  Identities=32%  Similarity=0.400  Sum_probs=40.7

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHH
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKAR   78 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~   78 (336)
                      .++++|+++|+|+ ||+|++++..|++.|++|++++|+.+++++..+.
T Consensus       328 ~~~~~k~vlIiGa-GgiG~aia~~L~~~G~~V~i~~R~~~~~~~la~~  374 (477)
T PRK09310        328 IPLNNQHVAIVGA-GGAAKAIATTLARAGAELLIFNRTKAHAEALASR  374 (477)
T ss_pred             CCcCCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Confidence            3578899999996 7999999999999999999999998877766544

>PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.30  E-value=0.034  Score=53.78  Aligned_cols=80  Identities=18%  Similarity=0.188  Sum_probs=53.4

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHh
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHS  110 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  110 (336)
                      |++.+|+++|+|.+ ++|.++++.|+++|++|.+.+.+....  ..+++++.  ...+.+...... ..    ..     
T Consensus         1 ~~~~~~~~~v~G~g-~~G~~~a~~l~~~g~~v~~~d~~~~~~--~~~~l~~~--~~gi~~~~g~~~-~~----~~-----   65 (445)
T PRK04308          1 MTFQNKKILVAGLG-GTGISMIAYLRKNGAEVAAYDAELKPE--RVAQIGKM--FDGLVFYTGRLK-DA----LD-----   65 (445)
T ss_pred             CCCCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCCCch--hHHHHhhc--cCCcEEEeCCCC-HH----HH-----
Confidence            45789999999975 999999999999999999998765431  12233321  124444443322 11    11     


Q ss_pred             cCCCccEEEEcccCCCC
Q 019722          111 LNLPLNLLINNAGKFAH  127 (336)
Q Consensus       111 ~~~~id~lv~nAg~~~~  127 (336)
                        ...|+||...|+...
T Consensus        66 --~~~d~vv~spgi~~~   80 (445)
T PRK04308         66 --NGFDILALSPGISER   80 (445)
T ss_pred             --hCCCEEEECCCCCCC
Confidence              257999999998643

>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]

Probab=96.30  E-value=0.18  Score=44.37  Aligned_cols=161  Identities=16%  Similarity=0.185  Sum_probs=97.9

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCC
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNL  113 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  113 (336)
                      .|.++||--|+||+|..+++.|-..|++++.+..+.++.+.+.+.      + --  ...|-+.++-++++.+-..-  .
T Consensus       146 pGhtVlvhaAAGGVGlll~Ql~ra~~a~tI~~asTaeK~~~aken------G-~~--h~I~y~~eD~v~~V~kiTng--K  214 (336)
T KOG1197|consen  146 PGHTVLVHAAAGGVGLLLCQLLRAVGAHTIATASTAEKHEIAKEN------G-AE--HPIDYSTEDYVDEVKKITNG--K  214 (336)
T ss_pred             CCCEEEEEeccccHHHHHHHHHHhcCcEEEEEeccHHHHHHHHhc------C-Cc--ceeeccchhHHHHHHhccCC--C
Confidence            688999999999999999999999999999999887776654432      2 22  22355555555555443211  3


Q ss_pred             CccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcccccccc
Q 019722          114 PLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQI  193 (336)
Q Consensus       114 ~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~~~  193 (336)
                      ++|+++-..|.         +.+...+               ..|+.       .|.+|..+-..+..++..-..++...
T Consensus       215 GVd~vyDsvG~---------dt~~~sl---------------~~Lk~-------~G~mVSfG~asgl~~p~~l~~ls~k~  263 (336)
T KOG1197|consen  215 GVDAVYDSVGK---------DTFAKSL---------------AALKP-------MGKMVSFGNASGLIDPIPLNQLSPKA  263 (336)
T ss_pred             Cceeeeccccc---------hhhHHHH---------------HHhcc-------CceEEEeccccCCCCCeehhhcChhh
Confidence            68988876664         2222221               12322       37888888777766543322111111


Q ss_pred             cCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeC
Q 019722          194 SRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHP  238 (336)
Q Consensus       194 ~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~P  238 (336)
                      ..-.  .+....|-....-+...+-.+-.......-+|+|+.+.|
T Consensus       264 l~lv--rpsl~gYi~g~~el~~~v~rl~alvnsg~lk~~I~~~yp  306 (336)
T KOG1197|consen  264 LQLV--RPSLLGYIDGEVELVSYVARLFALVNSGHLKIHIDHVYP  306 (336)
T ss_pred             hhhc--cHhhhcccCCHHHHHHHHHHHHHHhhcCccceeeeeecc
Confidence            1111  345555666666666555555445444334688888887

>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity

Probab=96.29  E-value=0.043  Score=50.42  Aligned_cols=118  Identities=22%  Similarity=0.264  Sum_probs=68.1

Q ss_pred             EEEEeCCCChHHHHHHHHHHHCCC--EEEEeeCCh--HHHHHHHHHHHhhCC--CCceEEEeccCCCHHHHHHHHHHHHh
Q 019722           37 TAIITGATSGIGAETARVLAKRGA--RLVLPARSL--KAAEEAKARLASDCP--GSDIVVLPLDLSSLSSVRNFVSQFHS  110 (336)
Q Consensus        37 ~~lItGgs~gIG~aia~~L~~~G~--~V~~~~r~~--~~~~~~~~~l~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~  110 (336)
                      ++.|+|++|.+|..++..|+..|.  .|++++|+.  ++++.....+.....  +....   ...+.  +...       
T Consensus         2 kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~~~~~l~~~~~dl~d~~~~~~~~~~---i~~~~--d~~~-------   69 (309)
T cd05294           2 KVSIIGASGRVGSATALLLAKEDVVKEINLISRPKSLEKLKGLRLDIYDALAAAGIDAE---IKISS--DLSD-------   69 (309)
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcccccccccccchhhhchhccCCCcE---EEECC--CHHH-------
Confidence            688999999999999999999986  599999964  444333333322100  11111   11111  1111       


Q ss_pred             cCCCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCcc
Q 019722          111 LNLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIH  179 (336)
Q Consensus       111 ~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~  179 (336)
                       ....|++|.++|..... ..+.   .+.++.|.    .+++.+.+.+.+..    +.+.+|+++++..
T Consensus        70 -l~~aDiViitag~p~~~-~~~r---~dl~~~n~----~i~~~~~~~i~~~~----~~~~viv~~npvd  125 (309)
T cd05294          70 -VAGSDIVIITAGVPRKE-GMSR---LDLAKKNA----KIVKKYAKQIAEFA----PDTKILVVTNPVD  125 (309)
T ss_pred             -hCCCCEEEEecCCCCCC-CCCH---HHHHHHHH----HHHHHHHHHHHHHC----CCeEEEEeCCchH
Confidence             22689999999974332 1121   23334443    45555555555542    2578888888643

The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox

>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.26  E-value=0.045  Score=53.47  Aligned_cols=84  Identities=17%  Similarity=0.132  Sum_probs=56.7

Q ss_pred             ccCCCCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChH-HHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHH
Q 019722           26 VTDGCPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLK-AAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNF  104 (336)
Q Consensus        26 ~~~~~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~-~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~  104 (336)
                      +.++..++++|.++|.|+ |++|.++|+.|+++|++|.+++++.. ......+.+++.    .+.+...+-..       
T Consensus         7 ~~~~~~~~~~~~v~viG~-G~~G~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~l~~~----gv~~~~~~~~~-------   74 (480)
T PRK01438          7 LTSWHSDWQGLRVVVAGL-GVSGFAAADALLELGARVTVVDDGDDERHRALAAILEAL----GATVRLGPGPT-------   74 (480)
T ss_pred             hhhcccCcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhhhHHHHHHHHHc----CCEEEECCCcc-------
Confidence            444466788999999995 78999999999999999999986543 333344445432    34444332211       


Q ss_pred             HHHHHhcCCCccEEEEcccCCCC
Q 019722          105 VSQFHSLNLPLNLLINNAGKFAH  127 (336)
Q Consensus       105 ~~~~~~~~~~id~lv~nAg~~~~  127 (336)
                            .....|++|...|+...
T Consensus        75 ------~~~~~D~Vv~s~Gi~~~   91 (480)
T PRK01438         75 ------LPEDTDLVVTSPGWRPD   91 (480)
T ss_pred             ------ccCCCCEEEECCCcCCC
Confidence                  01257999999997543

>TIGR01915 npdG NADPH-dependent F420 reductase

Probab=96.25  E-value=0.057  Score=46.93  Aligned_cols=42  Identities=36%  Similarity=0.506  Sum_probs=36.8

Q ss_pred             EEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHH
Q 019722           37 TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKAR   78 (336)
Q Consensus        37 ~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~   78 (336)
                      ++.|+||+|.+|.++++.|++.|++|++.+|++++.+...+.
T Consensus         2 kI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~~~~~~l~~~   43 (219)
T TIGR01915         2 KIAVLGGTGDQGKGLALRLAKAGNKIIIGSRDLEKAEEAAAK   43 (219)
T ss_pred             EEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCHHHHHHHHHH
Confidence            478999999999999999999999999999998887665543

This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.

>PRK14852 hypothetical protein; Provisional

Probab=96.24  E-value=0.033  Score=57.96  Aligned_cols=81  Identities=22%  Similarity=0.315  Sum_probs=61.1

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCC-------------------hHHHHHHHHHHHhhCCCCceEEEe
Q 019722           33 LSSVTAIITGATSGIGAETARVLAKRGA-RLVLPARS-------------------LKAAEEAKARLASDCPGSDIVVLP   92 (336)
Q Consensus        33 l~gk~~lItGgs~gIG~aia~~L~~~G~-~V~~~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~~~   92 (336)
                      |++.+|+|.| .||+|..+++.|+..|. ++.+++.+                   ..+++...+.+++.+|..++.++.
T Consensus       330 L~~srVlVvG-lGGlGs~ia~~LAraGVG~I~L~D~D~Ve~SNLNRQ~l~~~~dIG~~Kaevaa~~l~~INP~v~I~~~~  408 (989)
T PRK14852        330 LLRSRVAIAG-LGGVGGIHLMTLARTGIGNFNLADFDAYSPVNLNRQYGASIASFGRGKLDVMTERALSVNPFLDIRSFP  408 (989)
T ss_pred             HhcCcEEEEC-CcHHHHHHHHHHHHcCCCeEEEEcCCEecccccccccCCChhhCCChHHHHHHHHHHHHCCCCeEEEEe
Confidence            5778899998 78999999999999998 78887644                   246667777888888888888887


Q ss_pred             ccCCCHHHHHHHHHHHHhcCCCccEEEEcc
Q 019722           93 LDLSSLSSVRNFVSQFHSLNLPLNLLINNA  122 (336)
Q Consensus        93 ~Dl~~~~~v~~~~~~~~~~~~~id~lv~nA  122 (336)
                      ..++ .+.+..+++       ..|+||.+.
T Consensus       409 ~~I~-~en~~~fl~-------~~DiVVDa~  430 (989)
T PRK14852        409 EGVA-AETIDAFLK-------DVDLLVDGI  430 (989)
T ss_pred             cCCC-HHHHHHHhh-------CCCEEEECC
Confidence            7774 344554443       567777644

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=96.21  E-value=0.026  Score=51.88  Aligned_cols=78  Identities=19%  Similarity=0.304  Sum_probs=52.3

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCC
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNL  113 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  113 (336)
                      .|.++||+||++++|.++++.+...|++|+.+.+++++.+.+.+ +     +.. .++  |..+++..+.+ ++...  +
T Consensus       143 ~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l~~-~-----Ga~-~vi--~~~~~~~~~~v-~~~~~--~  210 (329)
T cd08294         143 AGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWLKE-L-----GFD-AVF--NYKTVSLEEAL-KEAAP--D  210 (329)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-c-----CCC-EEE--eCCCccHHHHH-HHHCC--C
Confidence            57899999999999999999999999999999988876554432 2     322 222  33332222222 22221  4


Q ss_pred             CccEEEEccc
Q 019722          114 PLNLLINNAG  123 (336)
Q Consensus       114 ~id~lv~nAg  123 (336)
                      ++|+++.+.|
T Consensus       211 gvd~vld~~g  220 (329)
T cd08294         211 GIDCYFDNVG  220 (329)
T ss_pred             CcEEEEECCC
Confidence            6999998776

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=96.21  E-value=0.03  Score=51.13  Aligned_cols=42  Identities=21%  Similarity=0.278  Sum_probs=37.0

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHH
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAE   73 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~   73 (336)
                      .++.|++++|.|. |++|+.+++.|...|++|++++|++++.+
T Consensus       148 ~~l~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~~~  189 (296)
T PRK08306        148 ITIHGSNVLVLGF-GRTGMTLARTLKALGANVTVGARKSAHLA  189 (296)
T ss_pred             CCCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHH
Confidence            4678999999996 78999999999999999999999976543

>PRK07877 hypothetical protein; Provisional

Probab=96.19  E-value=0.032  Score=56.82  Aligned_cols=80  Identities=25%  Similarity=0.320  Sum_probs=63.2

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCC--EEEEeeCC------------------hHHHHHHHHHHHhhCCCCceEEEe
Q 019722           33 LSSVTAIITGATSGIGAETARVLAKRGA--RLVLPARS------------------LKAAEEAKARLASDCPGSDIVVLP   92 (336)
Q Consensus        33 l~gk~~lItGgs~gIG~aia~~L~~~G~--~V~~~~r~------------------~~~~~~~~~~l~~~~~~~~~~~~~   92 (336)
                      |++++|+|.|. | +|..++..|+..|.  ++++++.+                  ..|++.+.+.+.+.+|..++..+.
T Consensus       105 L~~~~V~IvG~-G-lGs~~a~~LaraGvvG~l~lvD~D~ve~sNLnRq~~~~~diG~~Kv~~a~~~l~~inp~i~v~~~~  182 (722)
T PRK07877        105 LGRLRIGVVGL-S-VGHAIAHTLAAEGLCGELRLADFDTLELSNLNRVPAGVFDLGVNKAVVAARRIAELDPYLPVEVFT  182 (722)
T ss_pred             HhcCCEEEEEe-c-HHHHHHHHHHHccCCCeEEEEcCCEEcccccccccCChhhcccHHHHHHHHHHHHHCCCCEEEEEe
Confidence            68899999999 4 99999999999994  89888755                  246667788888888888999999


Q ss_pred             ccCCCHHHHHHHHHHHHhcCCCccEEEEcc
Q 019722           93 LDLSSLSSVRNFVSQFHSLNLPLNLLINNA  122 (336)
Q Consensus        93 ~Dl~~~~~v~~~~~~~~~~~~~id~lv~nA  122 (336)
                      ..++ ++.+..+++       ..|+||.|.
T Consensus       183 ~~i~-~~n~~~~l~-------~~DlVvD~~  204 (722)
T PRK07877        183 DGLT-EDNVDAFLD-------GLDVVVEEC  204 (722)
T ss_pred             ccCC-HHHHHHHhc-------CCCEEEECC
Confidence            8886 555655553       467777664

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.16  E-value=0.021  Score=51.64  Aligned_cols=39  Identities=18%  Similarity=0.248  Sum_probs=35.5

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCC
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARS   68 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~   68 (336)
                      ..+++||.++|.|+++-.|+.++..|+++|++|.++.|.
T Consensus       154 ~i~l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~  192 (283)
T PRK14192        154 NIELAGKHAVVVGRSAILGKPMAMMLLNANATVTICHSR  192 (283)
T ss_pred             CCCCCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCC
Confidence            457899999999988889999999999999999988874

>PRK04148 hypothetical protein; Provisional

Probab=96.15  E-value=0.015  Score=46.14  Aligned_cols=56  Identities=20%  Similarity=0.156  Sum_probs=45.3

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHH
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLS   99 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~   99 (336)
                      +++.+++.|.+  .|.+++..|++.|++|+.++.++...+.+.+        ..+.++..|+.+++
T Consensus        16 ~~~kileIG~G--fG~~vA~~L~~~G~~ViaIDi~~~aV~~a~~--------~~~~~v~dDlf~p~   71 (134)
T PRK04148         16 KNKKIVELGIG--FYFKVAKKLKESGFDVIVIDINEKAVEKAKK--------LGLNAFVDDLFNPN   71 (134)
T ss_pred             cCCEEEEEEec--CCHHHHHHHHHCCCEEEEEECCHHHHHHHHH--------hCCeEEECcCCCCC
Confidence            55789999976  8888999999999999999999986655432        25788899998753

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=96.15  E-value=0.045  Score=50.46  Aligned_cols=73  Identities=25%  Similarity=0.340  Sum_probs=53.5

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCC
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNL  113 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  113 (336)
                      .|++++|+|.+ |+|...++.+...|++|+.++|++++.+.+.+ +     +....+   |.++++....+.+       
T Consensus       166 pG~~V~I~G~G-GlGh~avQ~Aka~ga~Via~~~~~~K~e~a~~-l-----GAd~~i---~~~~~~~~~~~~~-------  228 (339)
T COG1064         166 PGKWVAVVGAG-GLGHMAVQYAKAMGAEVIAITRSEEKLELAKK-L-----GADHVI---NSSDSDALEAVKE-------  228 (339)
T ss_pred             CCCEEEEECCc-HHHHHHHHHHHHcCCeEEEEeCChHHHHHHHH-h-----CCcEEE---EcCCchhhHHhHh-------
Confidence            48999999988 99999999888899999999999998765443 2     333222   2234455544443       


Q ss_pred             CccEEEEccc
Q 019722          114 PLNLLINNAG  123 (336)
Q Consensus       114 ~id~lv~nAg  123 (336)
                      .+|++|.+++
T Consensus       229 ~~d~ii~tv~  238 (339)
T COG1064         229 IADAIIDTVG  238 (339)
T ss_pred             hCcEEEECCC
Confidence            2799998887

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=96.14  E-value=0.029  Score=54.28  Aligned_cols=59  Identities=20%  Similarity=0.204  Sum_probs=44.8

Q ss_pred             EEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHH
Q 019722           37 TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRN  103 (336)
Q Consensus        37 ~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~  103 (336)
                      .++|.|+ |.+|.++++.|.++|..|++++++++..+...+.       ..+.++.+|.++...+.+
T Consensus         2 ~viIiG~-G~ig~~~a~~L~~~g~~v~vid~~~~~~~~~~~~-------~~~~~~~gd~~~~~~l~~   60 (453)
T PRK09496          2 KIIIVGA-GQVGYTLAENLSGENNDVTVIDTDEERLRRLQDR-------LDVRTVVGNGSSPDVLRE   60 (453)
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhh-------cCEEEEEeCCCCHHHHHH
Confidence            5788886 9999999999999999999999998876654321       245666677776554444

>cd01486 Apg7 Apg7 is an E1-like protein, that activates two different ubiquitin-like proteins, Apg12 and Apg8, and assigns them to specific E2 enzymes, Apg10 and Apg3, respectively

Probab=96.13  E-value=0.026  Score=51.09  Aligned_cols=30  Identities=20%  Similarity=0.416  Sum_probs=25.3

Q ss_pred             EEEeCCCChHHHHHHHHHHHCCC-EEEEeeCC
Q 019722           38 AIITGATSGIGAETARVLAKRGA-RLVLPARS   68 (336)
Q Consensus        38 ~lItGgs~gIG~aia~~L~~~G~-~V~~~~r~   68 (336)
                      ++|.| .||+|..+++.|+..|. ++.+++.+
T Consensus         2 VLIvG-aGGLGs~vA~~La~aGVg~ItlvD~D   32 (307)
T cd01486           2 CLLLG-AGTLGCNVARNLLGWGVRHITFVDSG   32 (307)
T ss_pred             EEEEC-CCHHHHHHHHHHHHcCCCeEEEECCC
Confidence            56776 67999999999999998 88887644

This leads to the covalent conjugation of Apg8 with phosphatidylethanolamine, an important step in autophagy. Autophagy is a dynamic membrane phenomenon for bulk protein degradation in the lysosome/vacuole.

>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase

Probab=96.13  E-value=0.042  Score=58.03  Aligned_cols=88  Identities=22%  Similarity=0.250  Sum_probs=65.5

Q ss_pred             cccccCCCCCCCCCEEEEeCCCChHHHHHHHHHHHCCC-E-------------EEEeeCChHHHHHHHHHHHhhCCCCce
Q 019722           23 AEQVTDGCPNLSSVTAIITGATSGIGAETARVLAKRGA-R-------------LVLPARSLKAAEEAKARLASDCPGSDI   88 (336)
Q Consensus        23 ~~~~~~~~~~l~gk~~lItGgs~gIG~aia~~L~~~G~-~-------------V~~~~r~~~~~~~~~~~l~~~~~~~~~   88 (336)
                      ++........-..|.++|.|+ |.+|..+++.|++... .             |.+++++.+.++++.+..      .++
T Consensus       557 ~~~~~~~~~~~~~~rIlVLGA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~------~~~  629 (1042)
T PLN02819        557 NECNEKAEVTKKSQNVLILGA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGI------ENA  629 (1042)
T ss_pred             ccccccccccccCCcEEEECC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHhc------CCC
Confidence            333343233345778999995 9999999999998642 3             888899988777665542      256


Q ss_pred             EEEeccCCCHHHHHHHHHHHHhcCCCccEEEEcccC
Q 019722           89 VVLPLDLSSLSSVRNFVSQFHSLNLPLNLLINNAGK  124 (336)
Q Consensus        89 ~~~~~Dl~~~~~v~~~~~~~~~~~~~id~lv~nAg~  124 (336)
                      .++++|++|.+++.++++       .+|+||++...
T Consensus       630 ~~v~lDv~D~e~L~~~v~-------~~DaVIsalP~  658 (1042)
T PLN02819        630 EAVQLDVSDSESLLKYVS-------QVDVVISLLPA  658 (1042)
T ss_pred             ceEEeecCCHHHHHHhhc-------CCCEEEECCCc
Confidence            789999999988877765       58999999874

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=96.10  E-value=0.032  Score=42.99  Aligned_cols=71  Identities=20%  Similarity=0.210  Sum_probs=53.3

Q ss_pred             EEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCCCccE
Q 019722           38 AIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLPLNL  117 (336)
Q Consensus        38 ~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~  117 (336)
                      ++|.|. +.+|..+++.|.+.+.+|++++++++..++..+        ..+.++.+|.++++.++++--      .+.+.
T Consensus         1 vvI~G~-g~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~~--------~~~~~i~gd~~~~~~l~~a~i------~~a~~   65 (116)
T PF02254_consen    1 VVIIGY-GRIGREIAEQLKEGGIDVVVIDRDPERVEELRE--------EGVEVIYGDATDPEVLERAGI------EKADA   65 (116)
T ss_dssp             EEEES--SHHHHHHHHHHHHTTSEEEEEESSHHHHHHHHH--------TTSEEEES-TTSHHHHHHTTG------GCESE
T ss_pred             eEEEcC-CHHHHHHHHHHHhCCCEEEEEECCcHHHHHHHh--------cccccccccchhhhHHhhcCc------cccCE
Confidence            467775 689999999999977799999999887665443        237899999999998887521      25677


Q ss_pred             EEEccc
Q 019722          118 LINNAG  123 (336)
Q Consensus       118 lv~nAg  123 (336)
                      +|....
T Consensus        66 vv~~~~   71 (116)
T PF02254_consen   66 VVILTD   71 (116)
T ss_dssp             EEEESS
T ss_pred             EEEccC
Confidence            776654

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=96.09  E-value=0.045  Score=49.83  Aligned_cols=79  Identities=16%  Similarity=0.281  Sum_probs=52.6

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCC
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNL  113 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  113 (336)
                      .+++++|+|+++++|.+++..+...|++|+++.++.++.+.+ .++     +.. .++  |.........+.+.. . ..
T Consensus       144 ~~~~vli~g~~~~~g~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~-----g~~-~~~--~~~~~~~~~~~~~~~-~-~~  212 (328)
T cd08268         144 PGDSVLITAASSSVGLAAIQIANAAGATVIATTRTSEKRDAL-LAL-----GAA-HVI--VTDEEDLVAEVLRIT-G-GK  212 (328)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HHc-----CCC-EEE--ecCCccHHHHHHHHh-C-CC
Confidence            578999999999999999999999999999999987765544 221     221 222  222222222222222 1 12


Q ss_pred             CccEEEEccc
Q 019722          114 PLNLLINNAG  123 (336)
Q Consensus       114 ~id~lv~nAg  123 (336)
                      ++|++++++|
T Consensus       213 ~~d~vi~~~~  222 (328)
T cd08268         213 GVDVVFDPVG  222 (328)
T ss_pred             CceEEEECCc
Confidence            5999999887

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=96.04  E-value=0.05  Score=50.57  Aligned_cols=77  Identities=16%  Similarity=0.265  Sum_probs=51.5

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhc
Q 019722           33 LSSVTAIITGATSGIGAETARVLAKRGA-RLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSL  111 (336)
Q Consensus        33 l~gk~~lItGgs~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  111 (336)
                      ..|++++|+|+ |++|...++.+...|+ +|+++++++++.+.+ +++     +... +  .|..+. ++.+    +.+.
T Consensus       168 ~~g~~VlV~G~-G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a-~~l-----Ga~~-v--i~~~~~-~~~~----~~~~  232 (343)
T PRK09880        168 LQGKRVFVSGV-GPIGCLIVAAVKTLGAAEIVCADVSPRSLSLA-REM-----GADK-L--VNPQND-DLDH----YKAE  232 (343)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHH-HHc-----CCcE-E--ecCCcc-cHHH----Hhcc
Confidence            36899999986 8999999998888998 688899998776533 333     3222 1  233332 2222    2222


Q ss_pred             CCCccEEEEcccC
Q 019722          112 NLPLNLLINNAGK  124 (336)
Q Consensus       112 ~~~id~lv~nAg~  124 (336)
                      .+.+|++|.+.|.
T Consensus       233 ~g~~D~vid~~G~  245 (343)
T PRK09880        233 KGYFDVSFEVSGH  245 (343)
T ss_pred             CCCCCEEEECCCC
Confidence            3569999999883

>cd05288 PGDH Prostaglandin dehydrogenases

Probab=96.00  E-value=0.057  Score=49.57  Aligned_cols=79  Identities=18%  Similarity=0.240  Sum_probs=52.8

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCC
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNL  113 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  113 (336)
                      .|.+++|.|+++++|.++++.+.+.|++|+.+.++.++.+.+.+.+     +.. .++  |..+.+....+.+ ...  +
T Consensus       145 ~~~~vlI~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~~-----g~~-~~~--~~~~~~~~~~v~~-~~~--~  213 (329)
T cd05288         145 PGETVVVSAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCRWLVEEL-----GFD-AAI--NYKTPDLAEALKE-AAP--D  213 (329)
T ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhhc-----CCc-eEE--ecCChhHHHHHHH-hcc--C
Confidence            5789999999999999999999999999999998887655443222     221 222  2223332232222 221  4


Q ss_pred             CccEEEEccc
Q 019722          114 PLNLLINNAG  123 (336)
Q Consensus       114 ~id~lv~nAg  123 (336)
                      ++|+++.+.|
T Consensus       214 ~~d~vi~~~g  223 (329)
T cd05288         214 GIDVYFDNVG  223 (329)
T ss_pred             CceEEEEcch
Confidence            6999998877

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino

>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit

Probab=95.97  E-value=0.076  Score=51.86  Aligned_cols=99  Identities=17%  Similarity=0.210  Sum_probs=64.7

Q ss_pred             CCCCCCCccccccCCCCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEecc
Q 019722           15 SGYGSKSTAEQVTDGCPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLD   94 (336)
Q Consensus        15 ~~~~~~~~~~~~~~~~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D   94 (336)
                      +.|+.+.+ -+.|+ .....+.+++|.| .|.+|...+..+...|++|++++++.++.+... .+     +  ..++..|
T Consensus       146 ~~lgr~~~-g~~ta-ag~vp~akVlViG-aG~iGl~Aa~~ak~lGA~V~v~d~~~~rle~a~-~l-----G--a~~v~v~  214 (511)
T TIGR00561       146 HEFGRFFT-GQITA-AGKVPPAKVLVIG-AGVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQ-SM-----G--AEFLELD  214 (511)
T ss_pred             HHhhhhcC-Cceec-CCCCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-Hc-----C--CeEEecc
Confidence            45555554 33343 3455678999999 599999999999999999999999988654332 22     2  2333444


Q ss_pred             CC-------------CHHHHHHHHHHHHhcCCCccEEEEcccC
Q 019722           95 LS-------------SLSSVRNFVSQFHSLNLPLNLLINNAGK  124 (336)
Q Consensus        95 l~-------------~~~~v~~~~~~~~~~~~~id~lv~nAg~  124 (336)
                      ..             +.+..+...+.+.+.....|++|+++-+
T Consensus       215 ~~e~g~~~~gYa~~~s~~~~~~~~~~~~e~~~~~DIVI~Tali  257 (511)
T TIGR00561       215 FKEEGGSGDGYAKVMSEEFIAAEMELFAAQAKEVDIIITTALI  257 (511)
T ss_pred             ccccccccccceeecCHHHHHHHHHHHHHHhCCCCEEEECccc
Confidence            32             1233444444455555679999999844

In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.

>PTZ00117 malate dehydrogenase; Provisional

Probab=95.94  E-value=0.081  Score=48.84  Aligned_cols=122  Identities=14%  Similarity=0.151  Sum_probs=73.2

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCC-CEEEEeeCChHHHHHHHHHHHhhCC--CCceEEEeccCCCHHHHHHHHHHHH
Q 019722           33 LSSVTAIITGATSGIGAETARVLAKRG-ARLVLPARSLKAAEEAKARLASDCP--GSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        33 l~gk~~lItGgs~gIG~aia~~L~~~G-~~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      .+++.+.|+|| |.+|..++..|+..| ..|++++.+++.++-....+.....  +.... +.+ .++   .+ .+    
T Consensus         3 ~~~~KI~IIGa-G~vG~~ia~~l~~~~~~~l~L~Di~~~~~~g~~lDl~~~~~~~~~~~~-i~~-~~d---~~-~l----   71 (319)
T PTZ00117          3 VKRKKISMIGA-GQIGSTVALLILQKNLGDVVLYDVIKGVPQGKALDLKHFSTLVGSNIN-ILG-TNN---YE-DI----   71 (319)
T ss_pred             CCCcEEEEECC-CHHHHHHHHHHHHCCCCeEEEEECCCccchhHHHHHhhhccccCCCeE-EEe-CCC---HH-Hh----
Confidence            35678999996 889999999999999 6899999987654422222221100  11111 111 111   12 11    


Q ss_pred             hcCCCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccc
Q 019722          110 SLNLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHS  180 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~  180 (336)
                         ..-|++|.++|....+ ..+   -.+.+..|.    .+.+.+.+.+.+..    +++.+|++|.+...
T Consensus        72 ---~~ADiVVitag~~~~~-g~~---r~dll~~n~----~i~~~i~~~i~~~~----p~a~vivvsNP~di  127 (319)
T PTZ00117         72 ---KDSDVVVITAGVQRKE-EMT---REDLLTING----KIMKSVAESVKKYC----PNAFVICVTNPLDC  127 (319)
T ss_pred             ---CCCCEEEECCCCCCCC-CCC---HHHHHHHHH----HHHHHHHHHHHHHC----CCeEEEEecChHHH
Confidence               2579999999975432 112   234555565    46677777776653    25678888776533

>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent

Probab=95.91  E-value=0.064  Score=49.25  Aligned_cols=118  Identities=17%  Similarity=0.165  Sum_probs=70.4

Q ss_pred             EEEEeCCCChHHHHHHHHHHHCCC--EEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCCC
Q 019722           37 TAIITGATSGIGAETARVLAKRGA--RLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLP  114 (336)
Q Consensus        37 ~~lItGgs~gIG~aia~~L~~~G~--~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  114 (336)
                      ++.|+|++|.+|.+++..|+.++.  +++++++++  +.-....+....  ....+..+.  +.++.       .+.+..
T Consensus         1 KV~IiGaaG~VG~~~a~~l~~~~~~~elvL~Di~~--a~g~a~DL~~~~--~~~~i~~~~--~~~~~-------~~~~~d   67 (312)
T TIGR01772         1 KVAVLGAAGGIGQPLSLLLKLQPYVSELSLYDIAG--AAGVAADLSHIP--TAASVKGFS--GEEGL-------ENALKG   67 (312)
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCcEEEEecCCC--CcEEEchhhcCC--cCceEEEec--CCCch-------HHHcCC
Confidence            368999999999999999999885  799999876  221111222111  011111100  00011       112347


Q ss_pred             ccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCcc
Q 019722          115 LNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIH  179 (336)
Q Consensus       115 id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~  179 (336)
                      .|++|..||....+ ..+   =.+.+..|+.    +++...+.+.+..    +.+.+|++|.+.-
T Consensus        68 aDivvitaG~~~~~-g~~---R~dll~~N~~----I~~~i~~~i~~~~----p~~iiivvsNPvD  120 (312)
T TIGR01772        68 ADVVVIPAGVPRKP-GMT---RDDLFNVNAG----IVKDLVAAVAESC----PKAMILVITNPVN  120 (312)
T ss_pred             CCEEEEeCCCCCCC-Ccc---HHHHHHHhHH----HHHHHHHHHHHhC----CCeEEEEecCchh
Confidence            89999999975432 112   2345555654    6777777776653    2578888888764

Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.

>KOG2013 consensus SMT3/SUMO-activating complex, catalytic component UBA2 [Posttranslational modification, protein turnover, chaperones]

Probab=95.87  E-value=0.031  Score=52.99  Aligned_cols=84  Identities=14%  Similarity=0.159  Sum_probs=58.3

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhc
Q 019722           33 LSSVTAIITGATSGIGAETARVLAKRGA-RLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSL  111 (336)
Q Consensus        33 l~gk~~lItGgs~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  111 (336)
                      +++-.+||.| +||||.++.+.|+..|+ +|.+++-+.-.+..+         +.++.|-+=|+..+.+.. +.+.+.+.
T Consensus        10 i~~~riLvVG-aGGIGCELLKnLal~gf~~IhiIDlDTIDlSNL---------NRQFLFrkkhVgqsKA~v-A~~~v~~F   78 (603)
T KOG2013|consen   10 IKSGRILVVG-AGGIGCELLKNLALTGFEEIHIIDLDTIDLSNL---------NRQFLFRKKHVGQSKATV-AAKAVKQF   78 (603)
T ss_pred             hccCeEEEEe-cCcccHHHHHHHHHhcCCeeEEEeccceeccch---------hhhheeehhhcCchHHHH-HHHHHHHh
Confidence            3566788887 68999999999999998 899998775444322         456777777776555432 22233334


Q ss_pred             CCCccEEEEcccCCCC
Q 019722          112 NLPLNLLINNAGKFAH  127 (336)
Q Consensus       112 ~~~id~lv~nAg~~~~  127 (336)
                      .++++++-.+|-+..+
T Consensus        79 npn~~l~~yhanI~e~   94 (603)
T KOG2013|consen   79 NPNIKLVPYHANIKEP   94 (603)
T ss_pred             CCCCceEeccccccCc
Confidence            4678888888887654

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=95.85  E-value=0.032  Score=46.85  Aligned_cols=43  Identities=35%  Similarity=0.316  Sum_probs=37.4

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAE   73 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~   73 (336)
                      ..++.||++.|.| .|.||+++|+.|...|++|+..+|+.....
T Consensus        31 ~~~l~g~tvgIiG-~G~IG~~vA~~l~~fG~~V~~~d~~~~~~~   73 (178)
T PF02826_consen   31 GRELRGKTVGIIG-YGRIGRAVARRLKAFGMRVIGYDRSPKPEE   73 (178)
T ss_dssp             BS-STTSEEEEES-TSHHHHHHHHHHHHTT-EEEEEESSCHHHH
T ss_pred             ccccCCCEEEEEE-EcCCcCeEeeeeecCCceeEEecccCChhh
Confidence            6689999999998 699999999999999999999999987554

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=95.72  E-value=0.067  Score=51.75  Aligned_cols=78  Identities=22%  Similarity=0.167  Sum_probs=59.7

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcC
Q 019722           33 LSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLN  112 (336)
Q Consensus        33 l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  112 (336)
                      ...+.++|.|+ |.+|..+++.|.++|.+|++++++++..++..++      ...+.++.+|.++++.+.++-      .
T Consensus       229 ~~~~~iiIiG~-G~~g~~l~~~L~~~~~~v~vid~~~~~~~~~~~~------~~~~~~i~gd~~~~~~L~~~~------~  295 (453)
T PRK09496        229 KPVKRVMIVGG-GNIGYYLAKLLEKEGYSVKLIERDPERAEELAEE------LPNTLVLHGDGTDQELLEEEG------I  295 (453)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHH------CCCCeEEECCCCCHHHHHhcC------C
Confidence            45688999997 9999999999999999999999998876654443      235678899999887765532      2


Q ss_pred             CCccEEEEccc
Q 019722          113 LPLNLLINNAG  123 (336)
Q Consensus       113 ~~id~lv~nAg  123 (336)
                      ...|.+|....
T Consensus       296 ~~a~~vi~~~~  306 (453)
T PRK09496        296 DEADAFIALTN  306 (453)
T ss_pred             ccCCEEEECCC
Confidence            35777775544

>cd00300 LDH_like L-lactate dehydrogenase-like enzymes

Probab=95.72  E-value=1.3  Score=40.49  Aligned_cols=116  Identities=16%  Similarity=0.162  Sum_probs=72.8

Q ss_pred             EEeCCCChHHHHHHHHHHHCC--CEEEEeeCChHHHHHHHHHHHhhCCC-CceEEEeccCCCHHHHHHHHHHHHhcCCCc
Q 019722           39 IITGATSGIGAETARVLAKRG--ARLVLPARSLKAAEEAKARLASDCPG-SDIVVLPLDLSSLSSVRNFVSQFHSLNLPL  115 (336)
Q Consensus        39 lItGgs~gIG~aia~~L~~~G--~~V~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i  115 (336)
                      .|.|+ |++|.+++..|+.+|  .++++++++.+.++.....+....+. ....+..+  .+   ..    .    ...-
T Consensus         2 ~iiGa-G~VG~~~a~~l~~~~~~~el~l~D~~~~~~~g~~~DL~~~~~~~~~~~i~~~--~~---~~----~----l~~a   67 (300)
T cd00300           2 TIIGA-GNVGAAVAFALIAKGLASELVLVDVNEEKAKGDALDLSHASAFLATGTIVRG--GD---YA----D----AADA   67 (300)
T ss_pred             EEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHhHHHhccccCCCeEEEC--CC---HH----H----hCCC
Confidence            57775 689999999999999  58999999988877777666654221 11222211  11   11    1    2267


Q ss_pred             cEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccc
Q 019722          116 NLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHS  180 (336)
Q Consensus       116 d~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~  180 (336)
                      |++|.++|....+ ..+.   .+.+..    ...+++.+.+.+++..    +.+.+|++|.+...
T Consensus        68 DiVIitag~p~~~-~~~R---~~l~~~----n~~i~~~~~~~i~~~~----p~~~viv~sNP~d~  120 (300)
T cd00300          68 DIVVITAGAPRKP-GETR---LDLINR----NAPILRSVITNLKKYG----PDAIILVVSNPVDI  120 (300)
T ss_pred             CEEEEcCCCCCCC-CCCH---HHHHHH----HHHHHHHHHHHHHHhC----CCeEEEEccChHHH
Confidence            9999999975432 1121   233333    3456677777776653    35788888876543

Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot

>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases

Probab=95.70  E-value=0.34  Score=44.46  Aligned_cols=118  Identities=14%  Similarity=0.174  Sum_probs=75.6

Q ss_pred             EEEeCCCChHHHHHHHHHHHCCC--EEEEeeCChHHHHHHHHHHHhhCC---CCceEEEeccCCCHHHHHHHHHHHHhcC
Q 019722           38 AIITGATSGIGAETARVLAKRGA--RLVLPARSLKAAEEAKARLASDCP---GSDIVVLPLDLSSLSSVRNFVSQFHSLN  112 (336)
Q Consensus        38 ~lItGgs~gIG~aia~~L~~~G~--~V~~~~r~~~~~~~~~~~l~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  112 (336)
                      +.|.|+ |.+|..+|..|+.++.  ++++++.+++.++-....|....+   ..++.+...|          .+.    +
T Consensus         2 i~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~a~g~a~DL~~~~~~~~~~~~~i~~~~----------y~~----~   66 (307)
T cd05290           2 LVVIGA-GHVGSAVLNYALALGLFSEIVLIDVNEGVAEGEALDFHHATALTYSTNTKIRAGD----------YDD----C   66 (307)
T ss_pred             EEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHHHHHHHhhhccCCCCCEEEEECC----------HHH----h
Confidence            567887 9999999999999885  799999988777666666654321   1233333322          112    2


Q ss_pred             CCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccc
Q 019722          113 LPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHS  180 (336)
Q Consensus       113 ~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~  180 (336)
                      ..-|++|..||....+. .+.+ =.+.+..|    ..+++...+.+.+...    .+.+|++|.+.-.
T Consensus        67 ~~aDivvitaG~~~kpg-~tr~-R~dll~~N----~~I~~~i~~~i~~~~p----~~i~ivvsNPvDv  124 (307)
T cd05290          67 ADADIIVITAGPSIDPG-NTDD-RLDLAQTN----AKIIREIMGNITKVTK----EAVIILITNPLDI  124 (307)
T ss_pred             CCCCEEEECCCCCCCCC-CCch-HHHHHHHH----HHHHHHHHHHHHHhCC----CeEEEEecCcHHH
Confidence            36799999999754331 2210 12334444    4578888888877642    5777777776433

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=95.70  E-value=0.051  Score=51.91  Aligned_cols=41  Identities=20%  Similarity=0.295  Sum_probs=36.7

Q ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHH
Q 019722           32 NLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAE   73 (336)
Q Consensus        32 ~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~   73 (336)
                      .+.||+++|.|. |.||+.+++.|...|++|+++++++.+..
T Consensus       209 ~l~Gk~VlViG~-G~IG~~vA~~lr~~Ga~ViV~d~dp~ra~  249 (425)
T PRK05476        209 LIAGKVVVVAGY-GDVGKGCAQRLRGLGARVIVTEVDPICAL  249 (425)
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCchhhH
Confidence            368999999995 79999999999999999999999987654

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=95.67  E-value=0.084  Score=45.32  Aligned_cols=39  Identities=28%  Similarity=0.389  Sum_probs=35.3

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCCh
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSL   69 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~   69 (336)
                      ..+++||.+||.|| |.+|...++.|++.|++|++++++.
T Consensus         5 ~l~l~~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~~   43 (202)
T PRK06718          5 MIDLSNKRVVIVGG-GKVAGRRAITLLKYGAHIVVISPEL   43 (202)
T ss_pred             EEEcCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcCCC
Confidence            46799999999997 8999999999999999999998764

>cd08244 MDR_enoyl_red Possible enoyl reductase

Probab=95.63  E-value=0.084  Score=48.23  Aligned_cols=79  Identities=18%  Similarity=0.270  Sum_probs=53.1

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCC
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNL  113 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  113 (336)
                      .+.+++|+|+++++|.+++..+...|++|+.+.++.++.+.+ +++     +.. .++  |..+....+.+.+.. . ..
T Consensus       142 ~~~~vlI~g~~~~~g~~~~~la~~~g~~v~~~~~~~~~~~~~-~~~-----g~~-~~~--~~~~~~~~~~~~~~~-~-~~  210 (324)
T cd08244         142 PGDVVLVTAAAGGLGSLLVQLAKAAGATVVGAAGGPAKTALV-RAL-----GAD-VAV--DYTRPDWPDQVREAL-G-GG  210 (324)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHc-----CCC-EEE--ecCCccHHHHHHHHc-C-CC
Confidence            478999999999999999999999999999999988765543 332     222 122  333333333332221 1 12


Q ss_pred             CccEEEEccc
Q 019722          114 PLNLLINNAG  123 (336)
Q Consensus       114 ~id~lv~nAg  123 (336)
                      ++|+++++.|
T Consensus       211 ~~d~vl~~~g  220 (324)
T cd08244         211 GVTVVLDGVG  220 (324)
T ss_pred             CceEEEECCC
Confidence            5999998876

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr

>PRK08410 2-hydroxyacid dehydrogenase; Provisional

Probab=95.61  E-value=0.1  Score=48.04  Aligned_cols=39  Identities=23%  Similarity=0.221  Sum_probs=35.1

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCCh
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSL   69 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~   69 (336)
                      ..++.||++.|.| .|.||+++|+.+..-|++|+..+|..
T Consensus       140 ~~~L~gktvGIiG-~G~IG~~vA~~~~~fgm~V~~~d~~~  178 (311)
T PRK08410        140 LGEIKGKKWGIIG-LGTIGKRVAKIAQAFGAKVVYYSTSG  178 (311)
T ss_pred             ccccCCCEEEEEC-CCHHHHHHHHHHhhcCCEEEEECCCc
Confidence            3579999999998 69999999999999999999998753

>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases

Probab=95.60  E-value=0.5  Score=43.48  Aligned_cols=119  Identities=15%  Similarity=0.120  Sum_probs=75.2

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHCCC--EEEEeeCChHHHHHHHHHHHhhCCCC-ceEEEeccCCCHHHHHHHHHHHHhcC
Q 019722           36 VTAIITGATSGIGAETARVLAKRGA--RLVLPARSLKAAEEAKARLASDCPGS-DIVVLPLDLSSLSSVRNFVSQFHSLN  112 (336)
Q Consensus        36 k~~lItGgs~gIG~aia~~L~~~G~--~V~~~~r~~~~~~~~~~~l~~~~~~~-~~~~~~~Dl~~~~~v~~~~~~~~~~~  112 (336)
                      ..+.|+|+ |.+|.+++..|+..|.  ++++++.+.+.++-....+....+-. ...+...  .+.+   .        +
T Consensus         4 ~Ki~IiGa-G~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~v~~~--~dy~---~--------~   69 (312)
T cd05293           4 NKVTVVGV-GQVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIEAD--KDYS---V--------T   69 (312)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhccCCCCEEEEC--CCHH---H--------h
Confidence            47788995 9999999999999885  79999998877766666665542111 1122211  1111   1        2


Q ss_pred             CCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccc
Q 019722          113 LPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHS  180 (336)
Q Consensus       113 ~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~  180 (336)
                      ...|++|.+||....+ ..+.   .+.+..|    ..+++.+.+.+.+..    +.+.+|++|.+...
T Consensus        70 ~~adivvitaG~~~k~-g~~R---~dll~~N----~~i~~~~~~~i~~~~----p~~~vivvsNP~d~  125 (312)
T cd05293          70 ANSKVVIVTAGARQNE-GESR---LDLVQRN----VDIFKGIIPKLVKYS----PNAILLVVSNPVDI  125 (312)
T ss_pred             CCCCEEEECCCCCCCC-CCCH---HHHHHHH----HHHHHHHHHHHHHhC----CCcEEEEccChHHH
Confidence            2679999999975442 1222   2334444    456677777776653    25788888876543

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like

Probab=95.58  E-value=0.091  Score=48.59  Aligned_cols=78  Identities=22%  Similarity=0.253  Sum_probs=51.7

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCE-EEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcC
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGAR-LVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLN  112 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~~-V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  112 (336)
                      .|.+++|+|+ |++|..+++.+...|++ |+++++++++.+.+ +++     +.. .+  .|..+.+ .+.+.+.. . .
T Consensus       163 ~g~~vlV~G~-G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~-~~~-----ga~-~~--i~~~~~~-~~~~~~~~-~-~  229 (339)
T cd08239         163 GRDTVLVVGA-GPVGLGALMLARALGAEDVIGVDPSPERLELA-KAL-----GAD-FV--INSGQDD-VQEIRELT-S-G  229 (339)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHh-----CCC-EE--EcCCcch-HHHHHHHh-C-C
Confidence            5889999975 89999999999999998 99999988776543 333     322 12  2333333 33332221 1 1


Q ss_pred             CCccEEEEcccC
Q 019722          113 LPLNLLINNAGK  124 (336)
Q Consensus       113 ~~id~lv~nAg~  124 (336)
                      .++|++|.+.|.
T Consensus       230 ~~~d~vid~~g~  241 (339)
T cd08239         230 AGADVAIECSGN  241 (339)
T ss_pred             CCCCEEEECCCC
Confidence            269999998873

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at

>PRK12480 D-lactate dehydrogenase; Provisional

Probab=95.54  E-value=0.17  Score=46.85  Aligned_cols=91  Identities=21%  Similarity=0.209  Sum_probs=57.3

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHH---HHHhhCCCCceEEEeccCCCHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKA---RLASDCPGSDIVVLPLDLSSLSSVRNFVS  106 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~---~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~  106 (336)
                      ..++.|+++.|.| .|.||.++|+.|...|++|+..+|++........   .+........+.++.+-++.. ....+.+
T Consensus       141 ~~~l~g~~VgIIG-~G~IG~~vA~~L~~~G~~V~~~d~~~~~~~~~~~~~~~l~ell~~aDiVil~lP~t~~-t~~li~~  218 (330)
T PRK12480        141 SKPVKNMTVAIIG-TGRIGAATAKIYAGFGATITAYDAYPNKDLDFLTYKDSVKEAIKDADIISLHVPANKE-SYHLFDK  218 (330)
T ss_pred             ccccCCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEeCChhHhhhhhhccCCHHHHHhcCCEEEEeCCCcHH-HHHHHhH
Confidence            4579999999998 6889999999999999999999998754322111   122222245677777666532 2222233


Q ss_pred             HHHhcCCCccEEEEccc
Q 019722          107 QFHSLNLPLNLLINNAG  123 (336)
Q Consensus       107 ~~~~~~~~id~lv~nAg  123 (336)
                      +..+.. +.+.++-|++
T Consensus       219 ~~l~~m-k~gavlIN~a  234 (330)
T PRK12480        219 AMFDHV-KKGAILVNAA  234 (330)
T ss_pred             HHHhcC-CCCcEEEEcC
Confidence            333333 3455565655

>PRK08655 prephenate dehydrogenase; Provisional

Probab=95.51  E-value=0.15  Score=49.14  Aligned_cols=40  Identities=30%  Similarity=0.479  Sum_probs=35.0

Q ss_pred             EEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHH
Q 019722           37 TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAK   76 (336)
Q Consensus        37 ~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~   76 (336)
                      ++.|.||+|.+|.++++.|.++|++|++++|+++...+..
T Consensus         2 kI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~~a   41 (437)
T PRK08655          2 KISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEVA   41 (437)
T ss_pred             EEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHHHH
Confidence            5889999999999999999999999999999987654443

>cd01491 Ube1_repeat1 Ubiquitin activating enzyme (E1), repeat 1

Probab=95.48  E-value=0.12  Score=46.87  Aligned_cols=62  Identities=29%  Similarity=0.366  Sum_probs=47.6

Q ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCC-------------------hHHHHHHHHHHHhhCCCCceEEE
Q 019722           32 NLSSVTAIITGATSGIGAETARVLAKRGA-RLVLPARS-------------------LKAAEEAKARLASDCPGSDIVVL   91 (336)
Q Consensus        32 ~l~gk~~lItGgs~gIG~aia~~L~~~G~-~V~~~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~~   91 (336)
                      .|.+.+|||.| .+|+|.++++.|+..|. +|.+++.+                   ..+++.+.+.+++.+|..++..+
T Consensus        16 kL~~s~VLIvG-~gGLG~EiaKnLalaGVg~itI~D~d~ve~snL~rqf~~~~~dIGk~Kaea~~~~L~eLNp~V~V~~~   94 (286)
T cd01491          16 KLQKSNVLISG-LGGLGVEIAKNLILAGVKSVTLHDTKPCSWSDLSSQFYLREEDIGKNRAEASQARLAELNPYVPVTVS   94 (286)
T ss_pred             HHhcCcEEEEc-CCHHHHHHHHHHHHcCCCeEEEEcCCccchhhcccCccCChHHhCHHHHHHHHHHHHHHCCCCEEEEE
Confidence            36778899998 67999999999999998 78888744                   23556666777777777777776


Q ss_pred             ecc
Q 019722           92 PLD   94 (336)
Q Consensus        92 ~~D   94 (336)
                      ..+
T Consensus        95 ~~~   97 (286)
T cd01491          95 TGP   97 (286)
T ss_pred             ecc
Confidence            655

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Ubiquitin-E1 is a single-chain protein with a weakly conserved two-fold repeat. This CD represents the first repeat of Ub-E1.

>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

Probab=95.48  E-value=0.16  Score=47.83  Aligned_cols=79  Identities=15%  Similarity=0.184  Sum_probs=52.2

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCC-HHHHHHHHHHHHhc
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGA-RLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSS-LSSVRNFVSQFHSL  111 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~  111 (336)
                      .|.+++|+|+ ++||..+++.+...|+ +|+.+++++++.+.+ +++     +... ++  |..+ ...+...+.++.. 
T Consensus       185 ~g~~VlV~G~-G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a-~~~-----Ga~~-~i--~~~~~~~~~~~~v~~~~~-  253 (368)
T TIGR02818       185 EGDTVAVFGL-GGIGLSVIQGARMAKASRIIAIDINPAKFELA-KKL-----GATD-CV--NPNDYDKPIQEVIVEITD-  253 (368)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHh-----CCCe-EE--cccccchhHHHHHHHHhC-
Confidence            5789999975 9999999998888998 799999988876544 333     3221 12  3322 1223333333322 


Q ss_pred             CCCccEEEEcccC
Q 019722          112 NLPLNLLINNAGK  124 (336)
Q Consensus       112 ~~~id~lv~nAg~  124 (336)
                       +++|++|.+.|.
T Consensus       254 -~g~d~vid~~G~  265 (368)
T TIGR02818       254 -GGVDYSFECIGN  265 (368)
T ss_pred             -CCCCEEEECCCC
Confidence             369999999883

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.

>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=95.41  E-value=0.044  Score=44.10  Aligned_cols=40  Identities=18%  Similarity=0.220  Sum_probs=36.7

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChH
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLK   70 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~   70 (336)
                      .+++||.++|.|.+.-+|+.++..|.++|++|.++.++..
T Consensus        24 ~~~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t~   63 (140)
T cd05212          24 VRLDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKTI   63 (140)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCCc
Confidence            4899999999999999999999999999999999986643

NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional

>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain

Probab=95.40  E-value=0.0058  Score=52.61  Aligned_cols=60  Identities=27%  Similarity=0.345  Sum_probs=44.0

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCC
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLS   96 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~   96 (336)
                      ..+++||.++|.| +|.+|..-++.|++.|++|.+++.+...   ..+++..   ..++.++.-+..
T Consensus         4 ~l~l~gk~vlVvG-gG~va~rk~~~Ll~~ga~VtVvsp~~~~---~l~~l~~---~~~i~~~~~~~~   63 (205)
T TIGR01470         4 FANLEGRAVLVVG-GGDVALRKARLLLKAGAQLRVIAEELES---ELTLLAE---QGGITWLARCFD   63 (205)
T ss_pred             EEEcCCCeEEEEC-cCHHHHHHHHHHHHCCCEEEEEcCCCCH---HHHHHHH---cCCEEEEeCCCC
Confidence            3578999999999 5789999999999999999999876542   1222222   236777776654

This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=95.39  E-value=0.12  Score=40.67  Aligned_cols=76  Identities=21%  Similarity=0.252  Sum_probs=54.8

Q ss_pred             EEEEeCCCChHHHHHHHHHHH-CCCEEE-EeeCCh----------------------HHHHHHHHHHHhhCCCCceEEEe
Q 019722           37 TAIITGATSGIGAETARVLAK-RGARLV-LPARSL----------------------KAAEEAKARLASDCPGSDIVVLP   92 (336)
Q Consensus        37 ~~lItGgs~gIG~aia~~L~~-~G~~V~-~~~r~~----------------------~~~~~~~~~l~~~~~~~~~~~~~   92 (336)
                      .++|.|++|-+|+.+++.+.+ .+++++ .++|+.                      ..++++.+.     ++     +.
T Consensus         2 rV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~~~~~~v~~~l~~~~~~-----~D-----Vv   71 (124)
T PF01113_consen    2 RVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIGPLGVPVTDDLEELLEE-----AD-----VV   71 (124)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSST-SSBEBS-HHHHTTH------S-----EE
T ss_pred             EEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcCCcccccchhHHHhccc-----CC-----EE
Confidence            478999999999999999999 567755 455665                      223332222     12     66


Q ss_pred             ccCCCHHHHHHHHHHHHhcCCCccEEEEcccC
Q 019722           93 LDLSSLSSVRNFVSQFHSLNLPLNLLINNAGK  124 (336)
Q Consensus        93 ~Dl~~~~~v~~~~~~~~~~~~~id~lv~nAg~  124 (336)
                      .|+|.++.+...++.+.+.  ++.+++-..|.
T Consensus        72 IDfT~p~~~~~~~~~~~~~--g~~~ViGTTG~  101 (124)
T PF01113_consen   72 IDFTNPDAVYDNLEYALKH--GVPLVIGTTGF  101 (124)
T ss_dssp             EEES-HHHHHHHHHHHHHH--T-EEEEE-SSS
T ss_pred             EEcCChHHhHHHHHHHHhC--CCCEEEECCCC
Confidence            7999999999999988876  78999988886

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>PRK06487 glycerate dehydrogenase; Provisional

Probab=95.38  E-value=0.071  Score=49.18  Aligned_cols=38  Identities=21%  Similarity=0.287  Sum_probs=34.4

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCC
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARS   68 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~   68 (336)
                      ..++.||++.|.| .|.||+++|+.|...|++|+..+|.
T Consensus       143 ~~~l~gktvgIiG-~G~IG~~vA~~l~~fgm~V~~~~~~  180 (317)
T PRK06487        143 IVELEGKTLGLLG-HGELGGAVARLAEAFGMRVLIGQLP  180 (317)
T ss_pred             ccccCCCEEEEEC-CCHHHHHHHHHHhhCCCEEEEECCC
Confidence            3579999999999 6999999999999999999988875

>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases

Probab=95.33  E-value=0.18  Score=46.22  Aligned_cols=117  Identities=15%  Similarity=0.121  Sum_probs=69.0

Q ss_pred             EEEEeCCCChHHHHHHHHHHHCCC--EEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCCC
Q 019722           37 TAIITGATSGIGAETARVLAKRGA--RLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLP  114 (336)
Q Consensus        37 ~~lItGgs~gIG~aia~~L~~~G~--~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  114 (336)
                      ++.|+|++|.+|.+++..|+.+|.  ++++++.+  .++-....|....+..++.....    .+++       .+.+..
T Consensus         2 KI~IIGaaG~VG~~~a~~l~~~~~~~elvLiDi~--~a~g~alDL~~~~~~~~i~~~~~----~~~~-------y~~~~d   68 (310)
T cd01337           2 KVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIV--NTPGVAADLSHINTPAKVTGYLG----PEEL-------KKALKG   68 (310)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCcEEEEEecC--ccceeehHhHhCCCcceEEEecC----CCch-------HHhcCC
Confidence            578899999999999999999984  79999988  33322333332211111111100    0111       112336


Q ss_pred             ccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCc
Q 019722          115 LNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSI  178 (336)
Q Consensus       115 id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~  178 (336)
                      .|++|.+||....+ ..+   =.+.++.|.    .+++...+.+.+..    +.+.+|++|.+.
T Consensus        69 aDivvitaG~~~k~-g~t---R~dll~~N~----~i~~~i~~~i~~~~----p~a~vivvtNPv  120 (310)
T cd01337          69 ADVVVIPAGVPRKP-GMT---RDDLFNINA----GIVRDLATAVAKAC----PKALILIISNPV  120 (310)
T ss_pred             CCEEEEeCCCCCCC-CCC---HHHHHHHHH----HHHHHHHHHHHHhC----CCeEEEEccCch
Confidence            89999999975432 112   234455554    35555666665543    257889999876

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2

Probab=95.33  E-value=0.12  Score=47.32  Aligned_cols=79  Identities=20%  Similarity=0.255  Sum_probs=52.0

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCC
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNL  113 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  113 (336)
                      .|.+++|.|+++++|.++++.+...|++|+++.++.++.+.+.+ +     +.. .++  +..+....+. +.+... -.
T Consensus       139 ~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~~~~~-~-----g~~-~~~--~~~~~~~~~~-i~~~~~-~~  207 (324)
T cd08292         139 PGQWLIQNAAGGAVGKLVAMLAAARGINVINLVRRDAGVAELRA-L-----GIG-PVV--STEQPGWQDK-VREAAG-GA  207 (324)
T ss_pred             CCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecCHHHHHHHHh-c-----CCC-EEE--cCCCchHHHH-HHHHhC-CC
Confidence            57899999999999999999999999999999888776544432 1     222 222  2222222222 222211 12


Q ss_pred             CccEEEEccc
Q 019722          114 PLNLLINNAG  123 (336)
Q Consensus       114 ~id~lv~nAg  123 (336)
                      ++|+++.+.|
T Consensus       208 ~~d~v~d~~g  217 (324)
T cd08292         208 PISVALDSVG  217 (324)
T ss_pred             CCcEEEECCC
Confidence            5999998877

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina

>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1

Probab=95.33  E-value=0.064  Score=45.17  Aligned_cols=44  Identities=30%  Similarity=0.437  Sum_probs=36.2

Q ss_pred             EEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHh
Q 019722           37 TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLAS   81 (336)
Q Consensus        37 ~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~   81 (336)
                      ++.|.|+ |-+|..||..++..|++|.+.+++++.+++..+.++.
T Consensus         1 ~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~l~~~~~~i~~   44 (180)
T PF02737_consen    1 KVAVIGA-GTMGRGIAALFARAGYEVTLYDRSPEALERARKRIER   44 (180)
T ss_dssp             EEEEES--SHHHHHHHHHHHHTTSEEEEE-SSHHHHHHHHHHHHH
T ss_pred             CEEEEcC-CHHHHHHHHHHHhCCCcEEEEECChHHHHhhhhHHHH
Confidence            4677886 9999999999999999999999999988776666554

1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=95.30  E-value=0.083  Score=43.61  Aligned_cols=87  Identities=21%  Similarity=0.167  Sum_probs=55.6

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCC-----CceEEEeccCCCHHHHHHHHHH--H
Q 019722           36 VTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPG-----SDIVVLPLDLSSLSSVRNFVSQ--F  108 (336)
Q Consensus        36 k~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~-----~~~~~~~~Dl~~~~~v~~~~~~--~  108 (336)
                      +++-|.| .|-.|..+++.|+++|++|.+.+|++++.+++.++-.....+     .+..++-.-+.+.++++.++..  +
T Consensus         2 ~~Ig~IG-lG~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~g~~~~~s~~e~~~~~dvvi~~v~~~~~v~~v~~~~~i   80 (163)
T PF03446_consen    2 MKIGFIG-LGNMGSAMARNLAKAGYEVTVYDRSPEKAEALAEAGAEVADSPAEAAEQADVVILCVPDDDAVEAVLFGENI   80 (163)
T ss_dssp             BEEEEE---SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHHHTTEEEESSHHHHHHHBSEEEE-SSSHHHHHHHHHCTTH
T ss_pred             CEEEEEc-hHHHHHHHHHHHHhcCCeEEeeccchhhhhhhHHhhhhhhhhhhhHhhcccceEeecccchhhhhhhhhhHH
Confidence            3566777 589999999999999999999999998887766431110000     1223333447788888888887  6


Q ss_pred             HhcCCCccEEEEccc
Q 019722          109 HSLNLPLNLLINNAG  123 (336)
Q Consensus       109 ~~~~~~id~lv~nAg  123 (336)
                      .....+=.++|.+..
T Consensus        81 ~~~l~~g~iiid~sT   95 (163)
T PF03446_consen   81 LAGLRPGKIIIDMST   95 (163)
T ss_dssp             GGGS-TTEEEEE-SS
T ss_pred             hhccccceEEEecCC
Confidence            655444455555443

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>PTZ00075 Adenosylhomocysteinase; Provisional

Probab=95.29  E-value=0.088  Score=50.78  Aligned_cols=41  Identities=24%  Similarity=0.317  Sum_probs=36.4

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHH
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAA   72 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~   72 (336)
                      ..++||+++|.|.+ .||+.+|+.|...|++|+++.+++...
T Consensus       250 ~~LaGKtVgVIG~G-~IGr~vA~rL~a~Ga~ViV~e~dp~~a  290 (476)
T PTZ00075        250 VMIAGKTVVVCGYG-DVGKGCAQALRGFGARVVVTEIDPICA  290 (476)
T ss_pred             CCcCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCchhH
Confidence            46899999999965 699999999999999999998887654

>cd08241 QOR1 Quinone oxidoreductase (QOR)

Probab=95.27  E-value=0.12  Score=46.69  Aligned_cols=42  Identities=26%  Similarity=0.394  Sum_probs=36.9

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHH
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEA   75 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~   75 (336)
                      .|.+++|+|+++++|.+++..+...|+.|+.+.++.++.+.+
T Consensus       139 ~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~  180 (323)
T cd08241         139 PGETVLVLGAAGGVGLAAVQLAKALGARVIAAASSEEKLALA  180 (323)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhCCEEEEEeCCHHHHHHH
Confidence            578999999999999999999999999999999987665443

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic

>PRK13243 glyoxylate reductase; Reviewed

Probab=95.26  E-value=0.12  Score=47.95  Aligned_cols=41  Identities=27%  Similarity=0.248  Sum_probs=36.4

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKA   71 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~   71 (336)
                      ..++.||++.|.|- |.||+++|+.|...|++|+..+|+...
T Consensus       145 g~~L~gktvgIiG~-G~IG~~vA~~l~~~G~~V~~~d~~~~~  185 (333)
T PRK13243        145 GYDVYGKTIGIIGF-GRIGQAVARRAKGFGMRILYYSRTRKP  185 (333)
T ss_pred             ccCCCCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCCCCh
Confidence            35799999999995 999999999999999999999987543

>cd05286 QOR2 Quinone oxidoreductase (QOR)

Probab=95.23  E-value=0.16  Score=45.81  Aligned_cols=42  Identities=24%  Similarity=0.251  Sum_probs=36.9

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHH
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEA   75 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~   75 (336)
                      .|.+++|.|+++++|.++++.+...|++|+.+.+++++.+.+
T Consensus       136 ~g~~vlI~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~  177 (320)
T cd05286         136 PGDTVLVHAAAGGVGLLLTQWAKALGATVIGTVSSEEKAELA  177 (320)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHH
Confidence            578999999999999999999999999999998887765443

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone

>COG0111 SerA Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism]

Probab=95.22  E-value=0.11  Score=48.10  Aligned_cols=66  Identities=24%  Similarity=0.285  Sum_probs=49.5

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeC-ChHHHH--------HHHHHHHhhCCCCceEEEeccCCCHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPAR-SLKAAE--------EAKARLASDCPGSDIVVLPLDLSSLS   99 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r-~~~~~~--------~~~~~l~~~~~~~~~~~~~~Dl~~~~   99 (336)
                      ..++.|||+-|.| .|.||+++++.|..-|++|+..++ ......        ..++++.+   .+.+.++.+-+++.+
T Consensus       137 g~el~gkTvGIiG-~G~IG~~va~~l~afgm~v~~~d~~~~~~~~~~~~~~~~~~Ld~lL~---~sDiv~lh~PlT~eT  211 (324)
T COG0111         137 GTELAGKTVGIIG-LGRIGRAVAKRLKAFGMKVIGYDPYSPRERAGVDGVVGVDSLDELLA---EADILTLHLPLTPET  211 (324)
T ss_pred             cccccCCEEEEEC-CCHHHHHHHHHHHhCCCeEEEECCCCchhhhccccceecccHHHHHh---hCCEEEEcCCCCcch
Confidence            4489999999998 889999999999999999999998 332211        12333333   367888888887653

>PLN02740 Alcohol dehydrogenase-like

Probab=95.22  E-value=0.15  Score=48.16  Aligned_cols=79  Identities=15%  Similarity=0.216  Sum_probs=52.2

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHH-HHHHHHHHHHhc
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGA-RLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLS-SVRNFVSQFHSL  111 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~-~v~~~~~~~~~~  111 (336)
                      .|.+++|.|+ ++||..+++.+...|+ +|+.+++++++.+.+ +++     +... ++  |..+.+ .....+.++.. 
T Consensus       198 ~g~~VlV~G~-G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a-~~~-----Ga~~-~i--~~~~~~~~~~~~v~~~~~-  266 (381)
T PLN02740        198 AGSSVAIFGL-GAVGLAVAEGARARGASKIIGVDINPEKFEKG-KEM-----GITD-FI--NPKDSDKPVHERIREMTG-  266 (381)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCCcEEEEcCChHHHHHH-HHc-----CCcE-EE--ecccccchHHHHHHHHhC-
Confidence            5789999985 9999999999999998 699999988776544 222     3222 22  333221 22233333322 


Q ss_pred             CCCccEEEEcccC
Q 019722          112 NLPLNLLINNAGK  124 (336)
Q Consensus       112 ~~~id~lv~nAg~  124 (336)
                       +.+|++|.+.|.
T Consensus       267 -~g~dvvid~~G~  278 (381)
T PLN02740        267 -GGVDYSFECAGN  278 (381)
T ss_pred             -CCCCEEEECCCC
Confidence             269999999984

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.22  E-value=0.056  Score=48.76  Aligned_cols=39  Identities=15%  Similarity=0.318  Sum_probs=35.8

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCCh
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSL   69 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~   69 (336)
                      .+++||.++|+|.+.-+|+.++..|.++|++|.++.++.
T Consensus       154 i~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t  192 (286)
T PRK14175        154 IDLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRS  192 (286)
T ss_pred             CCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCc
Confidence            478999999999999999999999999999999988753

>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members

Probab=95.21  E-value=0.15  Score=46.70  Aligned_cols=78  Identities=18%  Similarity=0.253  Sum_probs=51.4

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCC
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNL  113 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  113 (336)
                      .|.+++|.|+++++|.+++..+...|++|+.+.+++++.+.+ +++     +.+ .++  +..+. .....+.....  .
T Consensus       139 ~~~~vlI~ga~g~ig~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~-----g~~-~v~--~~~~~-~~~~~~~~~~~--~  206 (329)
T cd08250         139 SGETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAEFL-KSL-----GCD-RPI--NYKTE-DLGEVLKKEYP--K  206 (329)
T ss_pred             CCCEEEEEeCccHHHHHHHHHHHHcCCeEEEEeCcHHHHHHH-HHc-----CCc-eEE--eCCCc-cHHHHHHHhcC--C
Confidence            578999999999999999999999999999999887765443 222     221 122  22222 22222222222  3


Q ss_pred             CccEEEEccc
Q 019722          114 PLNLLINNAG  123 (336)
Q Consensus       114 ~id~lv~nAg  123 (336)
                      .+|+++++.|
T Consensus       207 ~vd~v~~~~g  216 (329)
T cd08250         207 GVDVVYESVG  216 (329)
T ss_pred             CCeEEEECCc
Confidence            6899998776

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>PLN00112 malate dehydrogenase (NADP); Provisional

Probab=95.20  E-value=0.4  Score=46.14  Aligned_cols=116  Identities=16%  Similarity=0.119  Sum_probs=76.5

Q ss_pred             EEEEeCCCChHHHHHHHHHHHC-------CC--EEEEeeCChHHHHHHHHHHHhhC-CC-CceEEEeccCCCHHHHHHHH
Q 019722           37 TAIITGATSGIGAETARVLAKR-------GA--RLVLPARSLKAAEEAKARLASDC-PG-SDIVVLPLDLSSLSSVRNFV  105 (336)
Q Consensus        37 ~~lItGgs~gIG~aia~~L~~~-------G~--~V~~~~r~~~~~~~~~~~l~~~~-~~-~~~~~~~~Dl~~~~~v~~~~  105 (336)
                      .+.|+|++|.+|.+++-.|+..       |.  ++++++++.+.++-...+++... +- .++.+. .+  +.       
T Consensus       102 KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~~~~~v~i~-~~--~y-------  171 (444)
T PLN00112        102 NVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYPLLREVSIG-ID--PY-------  171 (444)
T ss_pred             EEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhhhcCceEEe-cC--CH-------
Confidence            5889999999999999999988       65  79999999998887777766532 11 122111 11  11       


Q ss_pred             HHHHhcCCCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHH-hhccCCCCCeEEEEcCCc
Q 019722          106 SQFHSLNLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIE-TAKATGIQGRIVNVSSSI  178 (336)
Q Consensus       106 ~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~-~~~~~~~~grIV~vsS~~  178 (336)
                          +.+..-|++|..||....+ ..+.   .+.++.|    ..+++...+.+.+ ...    .+.||++|.+.
T Consensus       172 ----e~~kdaDiVVitAG~prkp-G~tR---~dLl~~N----~~I~k~i~~~I~~~a~p----~~ivIVVsNPv  229 (444)
T PLN00112        172 ----EVFQDAEWALLIGAKPRGP-GMER---ADLLDIN----GQIFAEQGKALNEVASR----NVKVIVVGNPC  229 (444)
T ss_pred             ----HHhCcCCEEEECCCCCCCC-CCCH---HHHHHHH----HHHHHHHHHHHHHhcCC----CeEEEEcCCcH
Confidence                1133689999999975332 1222   3344444    3577777777776 332    57888888764

>PRK12550 shikimate 5-dehydrogenase; Reviewed

Probab=95.19  E-value=0.06  Score=48.45  Aligned_cols=44  Identities=18%  Similarity=0.264  Sum_probs=37.9

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHH
Q 019722           35 SVTAIITGATSGIGAETARVLAKRGA-RLVLPARSLKAAEEAKARL   79 (336)
Q Consensus        35 gk~~lItGgs~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~l   79 (336)
                      +|+++|.| +||-+++++..|++.|+ +|.++.|+.++++++.+.+
T Consensus       122 ~~~vlilG-aGGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~  166 (272)
T PRK12550        122 DLVVALRG-SGGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELY  166 (272)
T ss_pred             CCeEEEEC-CcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHh
Confidence            46899998 59999999999999998 6999999998887766543

>PLN02494 adenosylhomocysteinase

Probab=95.19  E-value=0.1  Score=50.30  Aligned_cols=40  Identities=23%  Similarity=0.352  Sum_probs=35.5

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHH
Q 019722           33 LSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAE   73 (336)
Q Consensus        33 l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~   73 (336)
                      +.||+++|.|. |.||+.+++.+...|++|+++.+++.+..
T Consensus       252 LaGKtVvViGy-G~IGr~vA~~aka~Ga~VIV~e~dp~r~~  291 (477)
T PLN02494        252 IAGKVAVICGY-GDVGKGCAAAMKAAGARVIVTEIDPICAL  291 (477)
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhhH
Confidence            68999999995 59999999999999999999999876543

>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy)

Probab=95.16  E-value=0.12  Score=49.38  Aligned_cols=42  Identities=24%  Similarity=0.400  Sum_probs=36.9

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHH
Q 019722           33 LSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEA   75 (336)
Q Consensus        33 l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~   75 (336)
                      +.|++++|.|+ |.||+.+++.+...|++|+++++++.++...
T Consensus       200 l~GktVvViG~-G~IG~~va~~ak~~Ga~ViV~d~d~~R~~~A  241 (413)
T cd00401         200 IAGKVAVVAGY-GDVGKGCAQSLRGQGARVIVTEVDPICALQA  241 (413)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECChhhHHHH
Confidence            68999999995 5899999999999999999999998776543

The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.

>cd01490 Ube1_repeat2 Ubiquitin activating enzyme (E1), repeat 2

Probab=95.16  E-value=0.17  Score=48.53  Aligned_cols=79  Identities=19%  Similarity=0.225  Sum_probs=53.1

Q ss_pred             EEEeCCCChHHHHHHHHHHHCCC------EEEEeeCC-------------------hHHHHHHHHHHHhhCCCCceEEEe
Q 019722           38 AIITGATSGIGAETARVLAKRGA------RLVLPARS-------------------LKAAEEAKARLASDCPGSDIVVLP   92 (336)
Q Consensus        38 ~lItGgs~gIG~aia~~L~~~G~------~V~~~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~~~   92 (336)
                      ++|.| +||||.++++.|+..|.      ++.+++.+                   ..+++.+.+.+++.+|+.++..+.
T Consensus         2 VlvVG-aGGlGcE~lKnLal~Gv~~g~~G~I~IvD~D~Ie~SNLnRQfLf~~~dIGk~Ka~vAa~~l~~lNp~v~I~a~~   80 (435)
T cd01490           2 VFLVG-AGAIGCELLKNFALMGVGTGESGEITVTDMDNIEKSNLNRQFLFRPHDVGKPKSEVAAAAVKAMNPDLKITALQ   80 (435)
T ss_pred             EEEEC-CCHHHHHHHHHHHHcCCCcCCCCeEEEECCCCccccccCcCccCChhHcCcHHHHHHHHHHHHHCCCCEEEEEe
Confidence            67776 78999999999999997      78887654                   235556667777777778888887


Q ss_pred             ccCCCHHHHHHHHHHHHhcCCCccEEEEc
Q 019722           93 LDLSSLSSVRNFVSQFHSLNLPLNLLINN  121 (336)
Q Consensus        93 ~Dl~~~~~v~~~~~~~~~~~~~id~lv~n  121 (336)
                      ..+.... ...+-..   .+...|++|++
T Consensus        81 ~~v~~~~-~~~~~~~---f~~~~DvVi~a  105 (435)
T cd01490          81 NRVGPET-EHIFNDE---FWEKLDGVANA  105 (435)
T ss_pred             cccChhh-hhhhhHH---HhcCCCEEEEC
Confidence            6664321 1111111   13357777766

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Ubiquitin-E1 is a single-chain protein with a weakly conserved two-fold repeat. This CD represents the second repeat of Ub-E1.

>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain

Probab=95.13  E-value=0.074  Score=39.45  Aligned_cols=41  Identities=27%  Similarity=0.389  Sum_probs=34.1

Q ss_pred             EEEEeCCCChHHHHHHHHHHHCC---CEEEEe-eCChHHHHHHHHHH
Q 019722           37 TAIITGATSGIGAETARVLAKRG---ARLVLP-ARSLKAAEEAKARL   79 (336)
Q Consensus        37 ~~lItGgs~gIG~aia~~L~~~G---~~V~~~-~r~~~~~~~~~~~l   79 (336)
                      ..+|  |+|.+|.++++.|++.|   .+|.++ .|++++.++..++.
T Consensus         2 I~iI--G~G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~   46 (96)
T PF03807_consen    2 IGII--GAGNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEY   46 (96)
T ss_dssp             EEEE--STSHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHC
T ss_pred             EEEE--CCCHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhh
Confidence            3444  79999999999999999   899966 89999888776653

It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....

>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

Probab=95.12  E-value=0.19  Score=46.86  Aligned_cols=41  Identities=22%  Similarity=0.242  Sum_probs=36.3

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHH
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEA   75 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~   75 (336)
                      .|.+++|.|+ |++|..+++.+...|++|+++++++++.+.+
T Consensus       166 ~g~~VlV~G~-G~vG~~a~~~a~~~G~~vi~~~~~~~~~~~~  206 (349)
T TIGR03201       166 KGDLVIVIGA-GGVGGYMVQTAKAMGAAVVAIDIDPEKLEMM  206 (349)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEcCCHHHHHHH
Confidence            4889999999 9999999999999999999999998876544

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.

>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases

Probab=95.09  E-value=0.11  Score=47.52  Aligned_cols=42  Identities=31%  Similarity=0.438  Sum_probs=36.8

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHH
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEA   75 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~   75 (336)
                      .+.+++|.|+++++|.++++.+...|++|+.+.+++++.+.+
T Consensus       146 ~~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~  187 (326)
T cd08289         146 EQGPVLVTGATGGVGSLAVSILAKLGYEVVASTGKADAADYL  187 (326)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEecCHHHHHHH
Confidence            367999999999999999999999999999999998765544

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH

>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR)

Probab=95.09  E-value=0.19  Score=45.61  Aligned_cols=42  Identities=26%  Similarity=0.318  Sum_probs=36.8

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHH
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEA   75 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~   75 (336)
                      .|.+++|.|+++++|.+++..+...|++|+.+.+++++.+.+
T Consensus       142 ~g~~vlV~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~  183 (320)
T cd08243         142 PGDTLLIRGGTSSVGLAALKLAKALGATVTATTRSPERAALL  183 (320)
T ss_pred             CCCEEEEEcCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            578999999999999999999999999999999887765443

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases

Probab=95.08  E-value=0.21  Score=46.92  Aligned_cols=78  Identities=13%  Similarity=0.189  Sum_probs=52.7

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCH-HHHHHHHHHHHhc
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGA-RLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSL-SSVRNFVSQFHSL  111 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~-~~v~~~~~~~~~~  111 (336)
                      .|.++||.| ++++|...++.+...|+ +|+.+++++++.+.+ +++     +.. .++  |..+. +.+...+.++.. 
T Consensus       186 ~g~~VlV~G-~G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~-~~l-----Ga~-~~i--~~~~~~~~~~~~v~~~~~-  254 (368)
T cd08300         186 PGSTVAVFG-LGAVGLAVIQGAKAAGASRIIGIDINPDKFELA-KKF-----GAT-DCV--NPKDHDKPIQQVLVEMTD-  254 (368)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH-HHc-----CCC-EEE--cccccchHHHHHHHHHhC-
Confidence            478999997 59999999999999999 799999998876543 332     322 122  33332 234343443332 


Q ss_pred             CCCccEEEEccc
Q 019722          112 NLPLNLLINNAG  123 (336)
Q Consensus       112 ~~~id~lv~nAg  123 (336)
                       +++|++|.+.|
T Consensus       255 -~g~d~vid~~g  265 (368)
T cd08300         255 -GGVDYTFECIG  265 (368)
T ss_pred             -CCCcEEEECCC
Confidence             37999999887

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim

>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase

Probab=95.06  E-value=0.19  Score=47.97  Aligned_cols=43  Identities=14%  Similarity=0.095  Sum_probs=35.3

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC---EEEEeeCChHHHHHHH
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGA---RLVLPARSLKAAEEAK   76 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~---~V~~~~r~~~~~~~~~   76 (336)
                      .|.+++|.||+|++|..+++.+...|+   +|+++++++++.+.+.
T Consensus       175 ~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~~a~  220 (410)
T cd08238         175 PGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERLARAQ  220 (410)
T ss_pred             CCCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCCHHHHHHHH
Confidence            467999999999999998887776654   7999999988776543

L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found

>cd05191 NAD_bind_amino_acid_DH NAD(P) binding domain of amino acid dehydrogenase-like proteins

Probab=95.04  E-value=0.14  Score=37.37  Aligned_cols=36  Identities=33%  Similarity=0.563  Sum_probs=31.9

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHC-CCEEEEeeC
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKR-GARLVLPAR   67 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~-G~~V~~~~r   67 (336)
                      .++++|+++|.|. |+.|..++..|.+. +.+|.+.+|
T Consensus        19 ~~~~~~~v~i~G~-G~~g~~~a~~l~~~~~~~v~v~~r   55 (86)
T cd05191          19 KSLKGKTVVVLGA-GEVGKGIAKLLADEGGKKVVLCDR   55 (86)
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcC
Confidence            4588999999998 99999999999999 458888877

Amino acid dehydrogenase(DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and are found in glutamate, leucine, and phenylalanine DHs (DHs), methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an al

>COG3007 Uncharacterized paraquat-inducible protein B [Function unknown]

Probab=95.03  E-value=0.24  Score=44.29  Aligned_cols=253  Identities=15%  Similarity=0.075  Sum_probs=128.5

Q ss_pred             CEEEEeCCCChHHHHHHHHHHH-CCCEEEEee--C-----ChH----HHHHHHHHHHhhCCCCceEEEeccCCCHHHHHH
Q 019722           36 VTAIITGATSGIGAETARVLAK-RGARLVLPA--R-----SLK----AAEEAKARLASDCPGSDIVVLPLDLSSLSSVRN  103 (336)
Q Consensus        36 k~~lItGgs~gIG~aia~~L~~-~G~~V~~~~--r-----~~~----~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~  103 (336)
                      |.|||.|+|+|.|++.--.++= .|++-+-+.  |     .+-    --.....+..++ .+.-..-+..|.-+.+.-+.
T Consensus        42 KkVLviGaSsGyGLa~RIsaaFG~gAdTiGVffE~pgte~~~gtagwyn~~~f~~~A~~-kGlyAksingDaFS~e~k~k  120 (398)
T COG3007          42 KKVLVIGASSGYGLAARISAAFGPGADTIGVFFERPGTERKPGTAGWYNNAAFKKFAKQ-KGLYAKSINGDAFSDEMKQK  120 (398)
T ss_pred             ceEEEEecCCcccHHHHHHHHhCCCCceeeEEeecCCccCCCcchhhhHHHHHHHHHHh-cCceeeecccchhhHHHHHH
Confidence            7999999999999875443331 345433321  1     110    011122222222 25566778889988888889


Q ss_pred             HHHHHHhcCCCccEEEEcccCCCCCC-----------------------C-------------CCchhhhhHHHHHHhHH
Q 019722          104 FVSQFHSLNLPLNLLINNAGKFAHQH-----------------------A-------------ISEDGIEMTFATNYLGH  147 (336)
Q Consensus       104 ~~~~~~~~~~~id~lv~nAg~~~~~~-----------------------~-------------~~~~~~~~~~~vn~~~~  147 (336)
                      +++.|.+.+|.+|.+|+.-+...+..                       +             -+.++++.+..|  .|-
T Consensus       121 vIe~Ik~~~g~vDlvvYSlAsp~Rk~pktgev~~SalKpIg~a~~~~~ldt~kd~i~e~~lepAseqEI~~Tv~V--MGG  198 (398)
T COG3007         121 VIEAIKQDFGKVDLVVYSLASPRRKHPKTGEVFRSALKPIGEAVSGRTLDTEKDVIIEATLEPASEQEIADTVAV--MGG  198 (398)
T ss_pred             HHHHHHHhhccccEEEEeccCccccCCCcchhhHhhhcchhhhccccccccccceeeeeecccccHHHHHHHHHh--hCc
Confidence            99999999999999998865322110                       0             012223333322  121


Q ss_pred             H---HHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHH
Q 019722          148 F---LLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRL  224 (336)
Q Consensus       148 ~---~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~  224 (336)
                      -   ..+.+++..-.-+     .+.+-|-.|-......             .+  -....+-+.+|.=++.-++.+...+
T Consensus       199 eDWq~WidaLl~advla-----eg~kTiAfsYiG~~iT-------------~~--IYw~GtiG~AK~DLd~~~~~inekL  258 (398)
T COG3007         199 EDWQMWIDALLEADVLA-----EGAKTIAFSYIGEKIT-------------HP--IYWDGTIGRAKKDLDQKSLAINEKL  258 (398)
T ss_pred             chHHHHHHHHHhccccc-----cCceEEEEEecCCccc-------------cc--eeeccccchhhhcHHHHHHHHHHHH
Confidence            1   1233333221111     1245555554433221             11  1122356899999999999999999


Q ss_pred             ccCCCcEEEEEeeCCceeCCCCCccch---hHHHHHHHHHHhhcCChHHHHHHHHHHHhcCccccCCceeeccCcccccc
Q 019722          225 KQMEANVTVNCVHPGIVRTRLTREREG---FITDLVFFLTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWTS  301 (336)
Q Consensus       225 ~~~g~~I~vn~v~PG~v~T~~~~~~~~---~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~~  301 (336)
                      +..+.+.+|  ..--.+-|.-...++.   ....+.+.+..  .+.-|-...-+-.+.+ +..  ..|+-+..+....+.
T Consensus       259 a~~gG~A~v--sVlKavVTqASsaIP~~plYla~lfkvMKe--kg~HEgcIeQi~rlfs-e~l--y~g~~~~~D~e~rlR  331 (398)
T COG3007         259 AALGGGARV--SVLKAVVTQASSAIPMMPLYLAILFKVMKE--KGTHEGCIEQIDRLFS-EKL--YSGSKIQLDDEGRLR  331 (398)
T ss_pred             HhcCCCeee--eehHHHHhhhhhccccccHHHHHHHHHHHH--cCcchhHHHHHHHHHH-HHh--hCCCCCCcCcccccc
Confidence            988743333  3333333433333221   11111111211  2344444555555554 321  236666666654444


Q ss_pred             cC--CCCH---HHHHHHHHHHH
Q 019722          302 KL--GSNS---NEASRLWAASE  318 (336)
Q Consensus       302 ~~--~~~~---~~~~~~w~~~~  318 (336)
                      .+  -..+   +..+++|.++.
T Consensus       332 ~Dd~El~~dvQ~~v~~lw~qvt  353 (398)
T COG3007         332 MDDWELRPDVQDQVRELWDQVT  353 (398)
T ss_pred             cchhhcCHHHHHHHHHHHHhcC
Confidence            22  2222   44578888653

>cd05282 ETR_like 2-enoyl thioester reductase-like

Probab=95.02  E-value=0.19  Score=45.89  Aligned_cols=79  Identities=20%  Similarity=0.207  Sum_probs=51.6

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCC
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNL  113 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  113 (336)
                      .|.+++|.|+++++|.++++.+...|++|+++.++.++.+.+ +++     +.. .++  +..+......+. +... ..
T Consensus       138 ~~~~vlI~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~-----g~~-~~~--~~~~~~~~~~~~-~~~~-~~  206 (323)
T cd05282         138 PGDWVIQNAANSAVGRMLIQLAKLLGFKTINVVRRDEQVEEL-KAL-----GAD-EVI--DSSPEDLAQRVK-EATG-GA  206 (323)
T ss_pred             CCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecChHHHHHH-Hhc-----CCC-EEe--cccchhHHHHHH-HHhc-CC
Confidence            578999999999999999999999999999998887664433 322     221 111  222222222222 2211 23


Q ss_pred             CccEEEEccc
Q 019722          114 PLNLLINNAG  123 (336)
Q Consensus       114 ~id~lv~nAg  123 (336)
                      ++|+++.+.|
T Consensus       207 ~~d~vl~~~g  216 (323)
T cd05282         207 GARLALDAVG  216 (323)
T ss_pred             CceEEEECCC
Confidence            6999998876

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman

>PRK06223 malate dehydrogenase; Reviewed

Probab=94.95  E-value=0.37  Score=44.09  Aligned_cols=119  Identities=18%  Similarity=0.180  Sum_probs=68.6

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhhCC--CCceEEEeccCCCHHHHHHHHHHHHhcC
Q 019722           36 VTAIITGATSGIGAETARVLAKRGA-RLVLPARSLKAAEEAKARLASDCP--GSDIVVLPLDLSSLSSVRNFVSQFHSLN  112 (336)
Q Consensus        36 k~~lItGgs~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  112 (336)
                      +.+.|.|+ |.+|..++..++.+|. +|++++++++.++.....+.....  ..... +.. .++.   .    .    +
T Consensus         3 ~KI~VIGa-G~vG~~ia~~la~~~~~ev~L~D~~~~~~~~~~~dl~~~~~~~~~~~~-i~~-~~d~---~----~----~   68 (307)
T PRK06223          3 KKISIIGA-GNVGATLAHLLALKELGDVVLFDIVEGVPQGKALDIAEAAPVEGFDTK-ITG-TNDY---E----D----I   68 (307)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEEECCCchhHHHHHHHHhhhhhcCCCcE-EEe-CCCH---H----H----H
Confidence            46788998 8899999999999875 999999988766543333322110  01111 111 0111   1    1    1


Q ss_pred             CCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccc
Q 019722          113 LPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHS  180 (336)
Q Consensus       113 ~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~  180 (336)
                      ..-|++|.++|...... .+   -.+.+..|    ..+.+.+.+.+.+..    +++.+|+++.+...
T Consensus        69 ~~aDiVii~~~~p~~~~-~~---r~~~~~~n----~~i~~~i~~~i~~~~----~~~~viv~tNP~d~  124 (307)
T PRK06223         69 AGSDVVVITAGVPRKPG-MS---RDDLLGIN----AKIMKDVAEGIKKYA----PDAIVIVVTNPVDA  124 (307)
T ss_pred             CCCCEEEECCCCCCCcC-CC---HHHHHHHH----HHHHHHHHHHHHHHC----CCeEEEEecCcHHH
Confidence            26799999999643321 11   12333333    356666666665543    24677877775443

>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase

Probab=94.94  E-value=0.094  Score=49.58  Aligned_cols=38  Identities=26%  Similarity=0.329  Sum_probs=32.4

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHC-CCEEEEeeCChHH
Q 019722           34 SSVTAIITGATSGIGAETARVLAKR-GARLVLPARSLKA   71 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~-G~~V~~~~r~~~~   71 (336)
                      ..+.+.|.||||.+|.++++.|+++ +++|..+.++.+.
T Consensus        37 ~~~kVaIvGATG~vG~eLlrlL~~hP~~el~~l~s~~sa   75 (381)
T PLN02968         37 EKKRIFVLGASGYTGAEVRRLLANHPDFEITVMTADRKA   75 (381)
T ss_pred             cccEEEEECCCChHHHHHHHHHHhCCCCeEEEEEChhhc
Confidence            3458999999999999999999999 6699988886544

>PRK05442 malate dehydrogenase; Provisional

Probab=94.93  E-value=0.16  Score=47.02  Aligned_cols=118  Identities=16%  Similarity=0.068  Sum_probs=69.8

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHCCC-------EEEEeeCChH--HHHHHHHHHHhhC-CC-CceEEEeccCCCHHHHHHH
Q 019722           36 VTAIITGATSGIGAETARVLAKRGA-------RLVLPARSLK--AAEEAKARLASDC-PG-SDIVVLPLDLSSLSSVRNF  104 (336)
Q Consensus        36 k~~lItGgs~gIG~aia~~L~~~G~-------~V~~~~r~~~--~~~~~~~~l~~~~-~~-~~~~~~~~Dl~~~~~v~~~  104 (336)
                      +.+.|+|++|.+|..++..|+..|.       .+++++.++.  +++-....+.... +- .++.+. .     .     
T Consensus         5 ~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~~~~~g~a~Dl~~~~~~~~~~~~i~-~-----~-----   73 (326)
T PRK05442          5 VRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPALKALEGVVMELDDCAFPLLAGVVIT-D-----D-----   73 (326)
T ss_pred             cEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCcccccceeehhhhhhhhhhcCCcEEe-c-----C-----
Confidence            4789999999999999999998774       6999998543  2333233332211 10 111111 0     0     


Q ss_pred             HHHHHhcCCCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCc
Q 019722          105 VSQFHSLNLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSI  178 (336)
Q Consensus       105 ~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~  178 (336)
                         ..+.+..-|++|..||....+ ..+   =.+.++.|    ..+++.+.+.+.+..   .+.+.+|++|.+.
T Consensus        74 ---~y~~~~daDiVVitaG~~~k~-g~t---R~dll~~N----a~i~~~i~~~i~~~~---~~~~iiivvsNPv  133 (326)
T PRK05442         74 ---PNVAFKDADVALLVGARPRGP-GME---RKDLLEAN----GAIFTAQGKALNEVA---ARDVKVLVVGNPA  133 (326)
T ss_pred             ---hHHHhCCCCEEEEeCCCCCCC-CCc---HHHHHHHH----HHHHHHHHHHHHHhC---CCCeEEEEeCCch
Confidence               011233689999999975332 122   23344444    457778888887732   1147888888754

>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B

Probab=94.92  E-value=0.027  Score=42.75  Aligned_cols=38  Identities=21%  Similarity=0.432  Sum_probs=32.9

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCCh
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSL   69 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~   69 (336)
                      .+++||.+||.|| |.+|..=++.|++.|++|.+++.+.
T Consensus         3 l~l~~~~vlVvGg-G~va~~k~~~Ll~~gA~v~vis~~~   40 (103)
T PF13241_consen    3 LDLKGKRVLVVGG-GPVAARKARLLLEAGAKVTVISPEI   40 (103)
T ss_dssp             E--TT-EEEEEEE-SHHHHHHHHHHCCCTBEEEEEESSE
T ss_pred             EEcCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCch
Confidence            4689999999997 9999999999999999999999886

>PTZ00082 L-lactate dehydrogenase; Provisional

Probab=94.91  E-value=0.8  Score=42.30  Aligned_cols=125  Identities=10%  Similarity=0.116  Sum_probs=73.1

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhh--CCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           33 LSSVTAIITGATSGIGAETARVLAKRGA-RLVLPARSLKAAEEAKARLASD--CPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        33 l~gk~~lItGgs~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      ++.+.+.|.| +|.+|..++..++.+|. +|++++.+++.+......+...  ..+....+..  .+|.   +    .  
T Consensus         4 ~~~~KI~IIG-aG~vG~~ia~~la~~gl~~i~LvDi~~~~~~~~~ld~~~~~~~~~~~~~I~~--~~d~---~----~--   71 (321)
T PTZ00082          4 IKRRKISLIG-SGNIGGVMAYLIVLKNLGDVVLFDIVKNIPQGKALDISHSNVIAGSNSKVIG--TNNY---E----D--   71 (321)
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHhCCCCeEEEEeCCCchhhHHHHHHHhhhhccCCCeEEEE--CCCH---H----H--
Confidence            3457889999 58899999999999995 9999999887543211111111  0111222221  0121   1    1  


Q ss_pred             hcCCCccEEEEcccCCCCCCCCCc-hhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCcc
Q 019722          110 SLNLPLNLLINNAGKFAHQHAISE-DGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIH  179 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~~~~~~~~-~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~  179 (336)
                        +..-|++|.++|....+...+. ..-.+.+..|+    .+.+.+.+.+.+..    +++.+|++|.+..
T Consensus        72 --l~~aDiVI~tag~~~~~~~~~~~~~r~~~l~~n~----~i~~~i~~~i~~~~----p~a~~iv~sNP~d  132 (321)
T PTZ00082         72 --IAGSDVVIVTAGLTKRPGKSDKEWNRDDLLPLNA----KIMDEVAEGIKKYC----PNAFVIVITNPLD  132 (321)
T ss_pred             --hCCCCEEEECCCCCCCCCCCcCCCCHHHHHHHHH----HHHHHHHHHHHHHC----CCeEEEEecCcHH
Confidence              2267999999997544321000 01234455553    46777777776653    2467888887654

>PLN02586 probable cinnamyl alcohol dehydrogenase

Probab=94.88  E-value=0.18  Score=47.25  Aligned_cols=74  Identities=18%  Similarity=0.275  Sum_probs=47.9

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCC
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNL  113 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  113 (336)
                      .|++++|.| +|+||..+++.+...|++|++++.+.++..+..+++     +.. .++  |..+.+.+..       ..+
T Consensus       183 ~g~~VlV~G-~G~vG~~avq~Ak~~Ga~vi~~~~~~~~~~~~~~~~-----Ga~-~vi--~~~~~~~~~~-------~~~  246 (360)
T PLN02586        183 PGKHLGVAG-LGGLGHVAVKIGKAFGLKVTVISSSSNKEDEAINRL-----GAD-SFL--VSTDPEKMKA-------AIG  246 (360)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCcchhhhHHHhC-----CCc-EEE--cCCCHHHHHh-------hcC
Confidence            588999976 599999999999999999988877765544443332     322 112  2223222221       123


Q ss_pred             CccEEEEccc
Q 019722          114 PLNLLINNAG  123 (336)
Q Consensus       114 ~id~lv~nAg  123 (336)
                      .+|++|.+.|
T Consensus       247 ~~D~vid~~g  256 (360)
T PLN02586        247 TMDYIIDTVS  256 (360)
T ss_pred             CCCEEEECCC
Confidence            6899998887

>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2

Probab=94.87  E-value=0.13  Score=45.07  Aligned_cols=37  Identities=30%  Similarity=0.486  Sum_probs=33.7

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCC---EEEEeeCC
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGA---RLVLPARS   68 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~---~V~~~~r~   68 (336)
                      .++++++++|.|+ |+.|.+++..|++.|.   +|++++|+
T Consensus        21 ~~l~~~rvlvlGA-GgAg~aiA~~L~~~G~~~~~i~ivdr~   60 (226)
T cd05311          21 KKIEEVKIVINGA-GAAGIAIARLLLAAGAKPENIVVVDSK   60 (226)
T ss_pred             CCccCCEEEEECc-hHHHHHHHHHHHHcCcCcceEEEEeCC
Confidence            4688999999996 9999999999999997   59999998

Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph

>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]

Probab=94.87  E-value=0.13  Score=46.42  Aligned_cols=105  Identities=16%  Similarity=0.241  Sum_probs=70.4

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcC-
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLN-  112 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~-  112 (336)
                      .|.|++|++|+|.+|.-..+-.--+|++|+-++-.+++.+-+.+++     +..   ...|-..+    .+.+.+.+.. 
T Consensus       150 ~GetvvVSaAaGaVGsvvgQiAKlkG~rVVGiaGg~eK~~~l~~~l-----GfD---~~idyk~~----d~~~~L~~a~P  217 (340)
T COG2130         150 AGETVVVSAAAGAVGSVVGQIAKLKGCRVVGIAGGAEKCDFLTEEL-----GFD---AGIDYKAE----DFAQALKEACP  217 (340)
T ss_pred             CCCEEEEEecccccchHHHHHHHhhCCeEEEecCCHHHHHHHHHhc-----CCc---eeeecCcc----cHHHHHHHHCC
Confidence            6999999999999998776666667999999999988877666654     211   11233333    2222333333 


Q ss_pred             CCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCcccc
Q 019722          113 LPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSW  181 (336)
Q Consensus       113 ~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~  181 (336)
                      .+||+.+-|.|-         +               ++.+.++.|..       .+||+..+-++...
T Consensus       218 ~GIDvyfeNVGg---------~---------------v~DAv~~~ln~-------~aRi~~CG~IS~YN  255 (340)
T COG2130         218 KGIDVYFENVGG---------E---------------VLDAVLPLLNL-------FARIPVCGAISQYN  255 (340)
T ss_pred             CCeEEEEEcCCc---------h---------------HHHHHHHhhcc-------ccceeeeeehhhcC
Confidence            379999999984         1               33455666655       37998887765543

>PTZ00354 alcohol dehydrogenase; Provisional

Probab=94.86  E-value=0.24  Score=45.36  Aligned_cols=42  Identities=21%  Similarity=0.377  Sum_probs=36.6

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHH
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEA   75 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~   75 (336)
                      .|.+++|.|+++++|.+++..+...|++++++.+++++.+.+
T Consensus       140 ~~~~vlI~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~  181 (334)
T PTZ00354        140 KGQSVLIHAGASGVGTAAAQLAEKYGAATIITTSSEEKVDFC  181 (334)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            468999999999999999999999999988888887765544

>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD)

Probab=94.86  E-value=0.23  Score=45.86  Aligned_cols=79  Identities=19%  Similarity=0.185  Sum_probs=52.3

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCC
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNL  113 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  113 (336)
                      .+.+++|.|+++++|.+++..+...|.+|+.+.+++++.+.+ +++     +... +  .+..+.+..+.+.+...  .+
T Consensus       165 ~~~~vlV~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~-----g~~~-v--~~~~~~~~~~~~~~~~~--~~  233 (341)
T cd08297         165 PGDWVVISGAGGGLGHLGVQYAKAMGLRVIAIDVGDEKLELA-KEL-----GADA-F--VDFKKSDDVEAVKELTG--GG  233 (341)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHH-HHc-----CCcE-E--EcCCCccHHHHHHHHhc--CC
Confidence            478999999999999999999999999999999998765533 332     2211 1  22233333333322221  23


Q ss_pred             CccEEEEccc
Q 019722          114 PLNLLINNAG  123 (336)
Q Consensus       114 ~id~lv~nAg  123 (336)
                      ++|+++++.+
T Consensus       234 ~vd~vl~~~~  243 (341)
T cd08297         234 GAHAVVVTAV  243 (341)
T ss_pred             CCCEEEEcCC
Confidence            6999998665

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase

Probab=94.84  E-value=0.28  Score=46.02  Aligned_cols=78  Identities=18%  Similarity=0.252  Sum_probs=51.9

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCH-HHHHHHHHHHHhc
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGA-RLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSL-SSVRNFVSQFHSL  111 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~-~~v~~~~~~~~~~  111 (336)
                      .|.+++|.|+ +++|..+++.+...|+ +|+.+++++++.+.+ +++     +.. .++  |..+. ..+.+.++++.. 
T Consensus       187 ~g~~VlV~G~-g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~-~~~-----Ga~-~~i--~~~~~~~~~~~~v~~~~~-  255 (369)
T cd08301         187 KGSTVAIFGL-GAVGLAVAEGARIRGASRIIGVDLNPSKFEQA-KKF-----GVT-EFV--NPKDHDKPVQEVIAEMTG-  255 (369)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHc-----CCc-eEE--cccccchhHHHHHHHHhC-
Confidence            5789999985 8999999999889998 899999998765543 322     322 122  22221 234344444333 


Q ss_pred             CCCccEEEEccc
Q 019722          112 NLPLNLLINNAG  123 (336)
Q Consensus       112 ~~~id~lv~nAg  123 (336)
                       +.+|+++.+.|
T Consensus       256 -~~~d~vid~~G  266 (369)
T cd08301         256 -GGVDYSFECTG  266 (369)
T ss_pred             -CCCCEEEECCC
Confidence             26999999887

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the

>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional

Probab=94.83  E-value=0.15  Score=46.84  Aligned_cols=90  Identities=18%  Similarity=0.125  Sum_probs=55.4

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHH---H--HHHHHhhCCCCceEEEeccCCCHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEE---A--KARLASDCPGSDIVVLPLDLSSLSSVRNF  104 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~---~--~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~  104 (336)
                      ..++.||++.|.| .|.||+++++.|...|++|+..+|+.+....   .  ...+.+..+.+.+.++.+-++.  +...+
T Consensus       131 ~~~l~g~tvgIvG-~G~IG~~vA~~l~afG~~V~~~~~~~~~~~~~~~~~~~~~l~e~l~~aDvvv~~lPlt~--~T~~l  207 (312)
T PRK15469        131 EYHREDFTIGILG-AGVLGSKVAQSLQTWGFPLRCWSRSRKSWPGVQSFAGREELSAFLSQTRVLINLLPNTP--ETVGI  207 (312)
T ss_pred             CCCcCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCCCCCCCceeecccccHHHHHhcCCEEEECCCCCH--HHHHH
Confidence            3468999999998 8899999999999999999999876543110   0  1112222224567777666653  33333


Q ss_pred             HH-HHHhcCCCccEEEEccc
Q 019722          105 VS-QFHSLNLPLNLLINNAG  123 (336)
Q Consensus       105 ~~-~~~~~~~~id~lv~nAg  123 (336)
                      +. +..+.. +.+.++-|.|
T Consensus       208 i~~~~l~~m-k~ga~lIN~a  226 (312)
T PRK15469        208 INQQLLEQL-PDGAYLLNLA  226 (312)
T ss_pred             hHHHHHhcC-CCCcEEEECC
Confidence            33 233333 3345555555

>TIGR00537 hemK_rel_arch HemK-related putative methylase

Probab=94.83  E-value=1.1  Score=37.30  Aligned_cols=78  Identities=17%  Similarity=0.160  Sum_probs=55.0

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcC
Q 019722           33 LSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLN  112 (336)
Q Consensus        33 l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  112 (336)
                      ..++.++=.|+++|.   ++..+++.+.+|+.++.+++..+.+.+.+...  +.++.++.+|+.+..            .
T Consensus        18 ~~~~~vLdlG~G~G~---~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~--~~~~~~~~~d~~~~~------------~   80 (179)
T TIGR00537        18 LKPDDVLEIGAGTGL---VAIRLKGKGKCILTTDINPFAVKELRENAKLN--NVGLDVVMTDLFKGV------------R   80 (179)
T ss_pred             cCCCeEEEeCCChhH---HHHHHHhcCCEEEEEECCHHHHHHHHHHHHHc--CCceEEEEccccccc------------C
Confidence            456778888877664   45556667778999999998887777766544  446888888875421            1


Q ss_pred             CCccEEEEcccCCCC
Q 019722          113 LPLNLLINNAGKFAH  127 (336)
Q Consensus       113 ~~id~lv~nAg~~~~  127 (336)
                      +..|+++.|......
T Consensus        81 ~~fD~Vi~n~p~~~~   95 (179)
T TIGR00537        81 GKFDVILFNPPYLPL   95 (179)
T ss_pred             CcccEEEECCCCCCC
Confidence            368999999765443

The gene hemK from E. coli was found to contribute to heme biosynthesis and originally suggested to be protoporphyrinogen oxidase (Medline 95189105). Functional analysis of the nearest homolog in Saccharomyces cerevisiae, YNL063w, finds it is not protoporphyrinogen oxidase and sequence analysis suggests that HemK homologs have S-adenosyl-methionine-dependent methyltransferase activity (Medline 99237242). Homologs are found, usually in a single copy, in nearly all completed genomes, but varying somewhat in apparent domain architecture. This model represents an archaeal and eukaryotic protein family that lacks an N-terminal domain found in HemK and its eubacterial homologs. It is found in a single copy in the first six completed archaeal and eukaryotic genomes.

>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases

Probab=94.82  E-value=1.2  Score=40.99  Aligned_cols=115  Identities=19%  Similarity=0.242  Sum_probs=69.7

Q ss_pred             EEEEeCCCChHHHHHHHHHHHCC--CEEEEeeCChHHHHHHHHHHHhhCC-CCceEEEeccCCCHHHHHHHHHHHHhcCC
Q 019722           37 TAIITGATSGIGAETARVLAKRG--ARLVLPARSLKAAEEAKARLASDCP-GSDIVVLPLDLSSLSSVRNFVSQFHSLNL  113 (336)
Q Consensus        37 ~~lItGgs~gIG~aia~~L~~~G--~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  113 (336)
                      .+.|.|+ |.+|..++..|+.+|  .+|++++++.++++.....+....+ ........   .+.+       .    ..
T Consensus         2 kI~IIGa-G~VG~~~a~~l~~~g~~~ev~l~D~~~~~~~g~a~dl~~~~~~~~~~~i~~---~d~~-------~----l~   66 (308)
T cd05292           2 KVAIVGA-GFVGSTTAYALLLRGLASEIVLVDINKAKAEGEAMDLAHGTPFVKPVRIYA---GDYA-------D----CK   66 (308)
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCCEEEEEECCchhhhhHHHHHHccccccCCeEEee---CCHH-------H----hC
Confidence            4778887 899999999999999  4899999998776644444432211 01112111   1111       1    23


Q ss_pred             CccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCc
Q 019722          114 PLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSI  178 (336)
Q Consensus       114 ~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~  178 (336)
                      ..|++|.++|.....    .....+.+..|    ..+++.+.+.+.+..    +.+.+++++...
T Consensus        67 ~aDiViita~~~~~~----~~~r~dl~~~n----~~i~~~~~~~l~~~~----~~giiiv~tNP~  119 (308)
T cd05292          67 GADVVVITAGANQKP----GETRLDLLKRN----VAIFKEIIPQILKYA----PDAILLVVTNPV  119 (308)
T ss_pred             CCCEEEEccCCCCCC----CCCHHHHHHHH----HHHHHHHHHHHHHHC----CCeEEEEecCcH
Confidence            689999999975332    11223333333    446666666666543    257888887654

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1

Probab=94.81  E-value=0.23  Score=45.65  Aligned_cols=77  Identities=18%  Similarity=0.333  Sum_probs=48.0

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCCCc
Q 019722           36 VTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLPL  115 (336)
Q Consensus        36 k~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i  115 (336)
                      ++++++||++++|.++++.+...|++|+.+.+++++.+.+. ++     +.. .++  |..+.+..+.+. ++.. -.++
T Consensus       145 ~vlv~~~g~g~vG~~a~q~a~~~G~~vi~~~~~~~~~~~~~-~~-----g~~-~~i--~~~~~~~~~~v~-~~~~-~~~~  213 (324)
T cd08291         145 KAVVHTAAASALGRMLVRLCKADGIKVINIVRRKEQVDLLK-KI-----GAE-YVL--NSSDPDFLEDLK-ELIA-KLNA  213 (324)
T ss_pred             cEEEEccCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-Hc-----CCc-EEE--ECCCccHHHHHH-HHhC-CCCC
Confidence            45555699999999999888888999999999887655443 22     322 222  222222222222 2211 1269


Q ss_pred             cEEEEccc
Q 019722          116 NLLINNAG  123 (336)
Q Consensus       116 d~lv~nAg  123 (336)
                      |++|.+.|
T Consensus       214 d~vid~~g  221 (324)
T cd08291         214 TIFFDAVG  221 (324)
T ss_pred             cEEEECCC
Confidence            99998877

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin

>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH)

Probab=94.79  E-value=0.27  Score=45.91  Aligned_cols=39  Identities=21%  Similarity=0.294  Sum_probs=34.2

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHH
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGA-RLVLPARSLKAAE   73 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~-~V~~~~r~~~~~~   73 (336)
                      .|+++||+| ++++|.++++.+...|+ +|+++.+++++.+
T Consensus       177 ~g~~vlI~g-~g~vG~~~~~lak~~G~~~v~~~~~~~~~~~  216 (361)
T cd08231         177 AGDTVVVQG-AGPLGLYAVAAAKLAGARRVIVIDGSPERLE  216 (361)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHH
Confidence            688999997 69999999999999999 9999988877654

This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino

>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF)

Probab=94.78  E-value=0.047  Score=44.90  Aligned_cols=45  Identities=20%  Similarity=0.314  Sum_probs=34.4

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEE   74 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~   74 (336)
                      ..++.||.++|.|.+.-+|+.++..|.++|+.|.++......+++
T Consensus        31 ~~~l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~T~~l~~   75 (160)
T PF02882_consen   31 GIDLEGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSKTKNLQE   75 (160)
T ss_dssp             T-STTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TTSSSHHH
T ss_pred             CCCCCCCEEEEECCcCCCChHHHHHHHhCCCeEEeccCCCCcccc
Confidence            457999999999999999999999999999999998766544433

Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....

>PRK13403 ketol-acid reductoisomerase; Provisional

Probab=94.75  E-value=0.4  Score=44.01  Aligned_cols=92  Identities=20%  Similarity=0.185  Sum_probs=58.0

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHH------HHHhhCCCCceEEEeccCCCHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKA------RLASDCPGSDIVVLPLDLSSLSSVRN  103 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~------~l~~~~~~~~~~~~~~Dl~~~~~v~~  103 (336)
                      ...|+||++.|.| -|.+|.++|+.|...|++|++..|.....+....      .+.+......+..+.+-  ++.+ ..
T Consensus        11 ~~~LkgKtVGIIG-~GsIG~amA~nL~d~G~~ViV~~r~~~s~~~A~~~G~~v~sl~Eaak~ADVV~llLP--d~~t-~~   86 (335)
T PRK13403         11 VELLQGKTVAVIG-YGSQGHAQAQNLRDSGVEVVVGVRPGKSFEVAKADGFEVMSVSEAVRTAQVVQMLLP--DEQQ-AH   86 (335)
T ss_pred             hhhhCcCEEEEEe-EcHHHHHHHHHHHHCcCEEEEEECcchhhHHHHHcCCEECCHHHHHhcCCEEEEeCC--ChHH-HH
Confidence            3568999999998 6899999999999999999988765433221111      12222223455555543  3444 44


Q ss_pred             HH-HHHHhcCCCccEEEEcccCC
Q 019722          104 FV-SQFHSLNLPLNLLINNAGKF  125 (336)
Q Consensus       104 ~~-~~~~~~~~~id~lv~nAg~~  125 (336)
                      ++ +.+.....+=.+|++..|+.
T Consensus        87 V~~~eil~~MK~GaiL~f~hgfn  109 (335)
T PRK13403         87 VYKAEVEENLREGQMLLFSHGFN  109 (335)
T ss_pred             HHHHHHHhcCCCCCEEEECCCcc
Confidence            44 34555444446788887753

>PLN02928 oxidoreductase family protein

Probab=94.73  E-value=0.13  Score=48.15  Aligned_cols=39  Identities=33%  Similarity=0.378  Sum_probs=35.4

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCCh
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSL   69 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~   69 (336)
                      ..++.||++.|.| .|.||+++|+.|...|++|+..+|+.
T Consensus       154 ~~~l~gktvGIiG-~G~IG~~vA~~l~afG~~V~~~dr~~  192 (347)
T PLN02928        154 GDTLFGKTVFILG-YGAIGIELAKRLRPFGVKLLATRRSW  192 (347)
T ss_pred             ccCCCCCEEEEEC-CCHHHHHHHHHHhhCCCEEEEECCCC
Confidence            3579999999999 59999999999999999999999874

>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase

Probab=94.72  E-value=0.21  Score=46.68  Aligned_cols=79  Identities=16%  Similarity=0.264  Sum_probs=50.5

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcC
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGA-RLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLN  112 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  112 (336)
                      .|.+++|.|+ +++|.++++.+...|+ +|+.+++++++.+.+ +++     +.. .++  |..+.+..+.+.+.. . -
T Consensus       176 ~g~~VlV~G~-g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~-~~~-----Ga~-~~i--~~~~~~~~~~i~~~~-~-~  243 (358)
T TIGR03451       176 RGDSVAVIGC-GGVGDAAIAGAALAGASKIIAVDIDDRKLEWA-REF-----GAT-HTV--NSSGTDPVEAIRALT-G-G  243 (358)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHc-----CCc-eEE--cCCCcCHHHHHHHHh-C-C
Confidence            4789999974 9999999998888998 598898988765544 222     322 222  333332223222211 1 1


Q ss_pred             CCccEEEEcccC
Q 019722          113 LPLNLLINNAGK  124 (336)
Q Consensus       113 ~~id~lv~nAg~  124 (336)
                      .++|++|.+.|.
T Consensus       244 ~g~d~vid~~g~  255 (358)
T TIGR03451       244 FGADVVIDAVGR  255 (358)
T ss_pred             CCCCEEEECCCC
Confidence            258999998873

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.

>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

Probab=94.71  E-value=0.25  Score=46.49  Aligned_cols=78  Identities=15%  Similarity=0.215  Sum_probs=50.8

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcC
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGA-RLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLN  112 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  112 (336)
                      .|.+++|.|+ +++|..++..+...|+ +|+++++++++.+.+ +++     +.. .+  .|..+.+..+.+. ++.  .
T Consensus       191 ~g~~VlV~G~-G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a-~~~-----Ga~-~~--i~~~~~~~~~~i~-~~~--~  257 (371)
T cd08281         191 PGQSVAVVGL-GGVGLSALLGAVAAGASQVVAVDLNEDKLALA-REL-----GAT-AT--VNAGDPNAVEQVR-ELT--G  257 (371)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHH-HHc-----CCc-eE--eCCCchhHHHHHH-HHh--C
Confidence            5789999985 8999999998888999 699999988876533 332     322 12  2333333223222 221  2


Q ss_pred             CCccEEEEcccC
Q 019722          113 LPLNLLINNAGK  124 (336)
Q Consensus       113 ~~id~lv~nAg~  124 (336)
                      +++|++|.+.|.
T Consensus       258 ~g~d~vid~~G~  269 (371)
T cd08281         258 GGVDYAFEMAGS  269 (371)
T ss_pred             CCCCEEEECCCC
Confidence            369999998873

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd

>PRK14967 putative methyltransferase; Provisional

Probab=94.63  E-value=1.1  Score=38.96  Aligned_cols=77  Identities=21%  Similarity=0.176  Sum_probs=51.4

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcC
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGA-RLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLN  112 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  112 (336)
                      .+.++|-.|+++|.   ++..+++.|. +|+.++.++..++...+.++..  +.++.++..|+.+.      +   .  .
T Consensus        36 ~~~~vLDlGcG~G~---~~~~la~~~~~~v~~vD~s~~~l~~a~~n~~~~--~~~~~~~~~d~~~~------~---~--~   99 (223)
T PRK14967         36 PGRRVLDLCTGSGA---LAVAAAAAGAGSVTAVDISRRAVRSARLNALLA--GVDVDVRRGDWARA------V---E--F   99 (223)
T ss_pred             CCCeEEEecCCHHH---HHHHHHHcCCCeEEEEECCHHHHHHHHHHHHHh--CCeeEEEECchhhh------c---c--C
Confidence            35788888877654   3444555676 8999999998777666555443  34577777776431      1   1  2


Q ss_pred             CCccEEEEcccCCC
Q 019722          113 LPLNLLINNAGKFA  126 (336)
Q Consensus       113 ~~id~lv~nAg~~~  126 (336)
                      ...|++|.|..+..
T Consensus       100 ~~fD~Vi~npPy~~  113 (223)
T PRK14967        100 RPFDVVVSNPPYVP  113 (223)
T ss_pred             CCeeEEEECCCCCC
Confidence            46899999987543

>cd08230 glucose_DH Glucose dehydrogenase

Probab=94.59  E-value=0.21  Score=46.57  Aligned_cols=74  Identities=27%  Similarity=0.343  Sum_probs=48.2

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeC---ChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHh
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGARLVLPAR---SLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHS  110 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r---~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  110 (336)
                      .|++++|+|+ |++|...++.+...|++|++++|   ++++.+ .++++     +..  .+  |..+.+ +.. .    .
T Consensus       172 ~g~~vlI~G~-G~vG~~a~q~ak~~G~~vi~~~~~~~~~~~~~-~~~~~-----Ga~--~v--~~~~~~-~~~-~----~  234 (355)
T cd08230         172 NPRRALVLGA-GPIGLLAALLLRLRGFEVYVLNRRDPPDPKAD-IVEEL-----GAT--YV--NSSKTP-VAE-V----K  234 (355)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEecCCCCHHHHH-HHHHc-----CCE--Ee--cCCccc-hhh-h----h
Confidence            6889999985 99999999888889999999998   444433 33322     332  22  332221 111 1    1


Q ss_pred             cCCCccEEEEcccC
Q 019722          111 LNLPLNLLINNAGK  124 (336)
Q Consensus       111 ~~~~id~lv~nAg~  124 (336)
                      ..+.+|++|.+.|.
T Consensus       235 ~~~~~d~vid~~g~  248 (355)
T cd08230         235 LVGEFDLIIEATGV  248 (355)
T ss_pred             hcCCCCEEEECcCC
Confidence            12479999999873

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai

>PF03808 Glyco_tran_WecB: Glycosyl transferase WecB/TagA/CpsF family; InterPro: IPR004629 The WecG member of this superfamily, believed to be UDP-N-acetyl-D-mannosaminuronic acid transferase, plays a role in Enterobacterial common antigen (eca) synthesis in Escherichia coli

Probab=94.58  E-value=0.44  Score=39.75  Aligned_cols=76  Identities=20%  Similarity=0.236  Sum_probs=60.5

Q ss_pred             HHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCCCccEEEEcccC
Q 019722           47 IGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLPLNLLINNAGK  124 (336)
Q Consensus        47 IG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~lv~nAg~  124 (336)
                      +=..+.+.+.+++.+|++++-+++.++++.+.+++.+|+.++.....=--++++.+.+++.|.+.  ++|+|+..-|.
T Consensus        36 l~~~l~~~~~~~~~~ifllG~~~~~~~~~~~~l~~~yP~l~ivg~~~g~f~~~~~~~i~~~I~~~--~pdiv~vglG~  111 (172)
T PF03808_consen   36 LFPDLLRRAEQRGKRIFLLGGSEEVLEKAAANLRRRYPGLRIVGYHHGYFDEEEEEAIINRINAS--GPDIVFVGLGA  111 (172)
T ss_pred             HHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHHHCCCeEEEEecCCCCChhhHHHHHHHHHHc--CCCEEEEECCC
Confidence            33455555666789999999999999999999999999877775543323788888888888876  78999998885

Another family member, the Bacillus subtilis TagA protein, is involved in the biosynthesis of the cell wall polymer poly(glycerol phosphate). The third family member, CpsF, CMP-N-acetylneuraminic acid synthetase has a role in the capsular polysaccharide biosynthesis pathway.; GO: 0009058 biosynthetic process

>cd08246 crotonyl_coA_red crotonyl-CoA reductase

Probab=94.57  E-value=0.36  Score=45.68  Aligned_cols=42  Identities=26%  Similarity=0.314  Sum_probs=36.4

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHH
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEA   75 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~   75 (336)
                      .|.+++|+|+++++|.+++..+...|++++++.+++++.+.+
T Consensus       193 ~g~~vlV~ga~g~iG~a~~~lak~~G~~vv~~~~s~~~~~~~  234 (393)
T cd08246         193 PGDNVLIWGASGGLGSMAIQLARAAGANPVAVVSSEEKAEYC  234 (393)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHcCCeEEEEeCCHHHHHHH
Confidence            478999999999999999999999999988888887765543

Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma

>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase

Probab=94.55  E-value=0.33  Score=45.08  Aligned_cols=79  Identities=28%  Similarity=0.331  Sum_probs=51.3

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcC
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGA-RLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLN  112 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  112 (336)
                      .|++++|.|+ +++|.++++.+...|+ +|+++.++.++.+.+ .++     +... +  .|..+.+..+.+.+.. . .
T Consensus       172 ~g~~vlI~g~-g~vG~~a~q~a~~~G~~~v~~~~~~~~~~~~~-~~~-----ga~~-~--i~~~~~~~~~~l~~~~-~-~  239 (351)
T cd08233         172 PGDTALVLGA-GPIGLLTILALKAAGASKIIVSEPSEARRELA-EEL-----GATI-V--LDPTEVDVVAEVRKLT-G-G  239 (351)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHh-----CCCE-E--ECCCccCHHHHHHHHh-C-C
Confidence            5789999985 8999999999999999 888888887765533 322     2221 1  2333333233322221 1 1


Q ss_pred             CCccEEEEcccC
Q 019722          113 LPLNLLINNAGK  124 (336)
Q Consensus       113 ~~id~lv~nAg~  124 (336)
                      +++|+++.+.|.
T Consensus       240 ~~~d~vid~~g~  251 (351)
T cd08233         240 GGVDVSFDCAGV  251 (351)
T ss_pred             CCCCEEEECCCC
Confidence            259999999873

(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.

>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins

Probab=94.54  E-value=0.13  Score=40.62  Aligned_cols=88  Identities=24%  Similarity=0.376  Sum_probs=53.7

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEe-eCChHHHHHHHHHHHhh--------CCCCceEEEeccCCCHHHHHHHH
Q 019722           35 SVTAIITGATSGIGAETARVLAKRGARLVLP-ARSLKAAEEAKARLASD--------CPGSDIVVLPLDLSSLSSVRNFV  105 (336)
Q Consensus        35 gk~~lItGgs~gIG~aia~~L~~~G~~V~~~-~r~~~~~~~~~~~l~~~--------~~~~~~~~~~~Dl~~~~~v~~~~  105 (336)
                      .-++-|.|+ |-+|.++++.|.+.|++|..+ +|+.++.+++...+...        .....+.++.  +.| +.+..++
T Consensus        10 ~l~I~iIGa-GrVG~~La~aL~~ag~~v~~v~srs~~sa~~a~~~~~~~~~~~~~~~~~~aDlv~ia--vpD-daI~~va   85 (127)
T PF10727_consen   10 RLKIGIIGA-GRVGTALARALARAGHEVVGVYSRSPASAERAAAFIGAGAILDLEEILRDADLVFIA--VPD-DAIAEVA   85 (127)
T ss_dssp             --EEEEECT-SCCCCHHHHHHHHTTSEEEEESSCHH-HHHHHHC--TT-----TTGGGCC-SEEEE---S-C-CHHHHHH
T ss_pred             ccEEEEECC-CHHHHHHHHHHHHCCCeEEEEEeCCcccccccccccccccccccccccccCCEEEEE--ech-HHHHHHH
Confidence            346778885 889999999999999998766 47766666655544221        1123444443  333 4888888


Q ss_pred             HHHHhc--CCCccEEEEcccCCC
Q 019722          106 SQFHSL--NLPLNLLINNAGKFA  126 (336)
Q Consensus       106 ~~~~~~--~~~id~lv~nAg~~~  126 (336)
                      +++...  ..+=.+++|+.|...
T Consensus        86 ~~La~~~~~~~g~iVvHtSGa~~  108 (127)
T PF10727_consen   86 EQLAQYGAWRPGQIVVHTSGALG  108 (127)
T ss_dssp             HHHHCC--S-TT-EEEES-SS--
T ss_pred             HHHHHhccCCCCcEEEECCCCCh
Confidence            888775  434469999999653

This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.

>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.51  E-value=0.075  Score=48.29  Aligned_cols=40  Identities=15%  Similarity=0.247  Sum_probs=36.7

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChH
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLK   70 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~   70 (336)
                      -+++||.+.|.|.++-+|+.++..|+++|+.|.++.|...
T Consensus       155 i~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~  194 (301)
T PRK14194        155 GDLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRST  194 (301)
T ss_pred             CCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCC
Confidence            4789999999999999999999999999999999976644

>PLN02178 cinnamyl-alcohol dehydrogenase

Probab=94.49  E-value=0.22  Score=47.00  Aligned_cols=75  Identities=21%  Similarity=0.311  Sum_probs=48.6

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCC
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNL  113 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  113 (336)
                      .|.+++|.|+ +++|..+++.+...|++|++++++.++..+.++++     +... ++  |..+.+.+.   +    ..+
T Consensus       178 ~g~~VlV~G~-G~vG~~avq~Ak~~Ga~Vi~~~~~~~~~~~~a~~l-----Ga~~-~i--~~~~~~~v~---~----~~~  241 (375)
T PLN02178        178 SGKRLGVNGL-GGLGHIAVKIGKAFGLRVTVISRSSEKEREAIDRL-----GADS-FL--VTTDSQKMK---E----AVG  241 (375)
T ss_pred             CCCEEEEEcc-cHHHHHHHHHHHHcCCeEEEEeCChHHhHHHHHhC-----CCcE-EE--cCcCHHHHH---H----hhC
Confidence            5789999875 89999999999999999999887765433333332     3221 22  222322221   1    123


Q ss_pred             CccEEEEcccC
Q 019722          114 PLNLLINNAGK  124 (336)
Q Consensus       114 ~id~lv~nAg~  124 (336)
                      ++|++|.+.|.
T Consensus       242 ~~D~vid~~G~  252 (375)
T PLN02178        242 TMDFIIDTVSA  252 (375)
T ss_pred             CCcEEEECCCc
Confidence            68999998873

>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1

Probab=94.48  E-value=0.33  Score=44.95  Aligned_cols=75  Identities=19%  Similarity=0.352  Sum_probs=48.7

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCC
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNL  113 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  113 (336)
                      .|.+++|+|+++++|.++++.+...|++|+.+.++ ++ .+.++++     +.. ..  .|..+......+    .. .+
T Consensus       162 ~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~-~~-~~~~~~~-----g~~-~~--~~~~~~~~~~~l----~~-~~  226 (350)
T cd08248         162 AGKRVLILGGSGGVGTFAIQLLKAWGAHVTTTCST-DA-IPLVKSL-----GAD-DV--IDYNNEDFEEEL----TE-RG  226 (350)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCc-ch-HHHHHHh-----CCc-eE--EECCChhHHHHH----Hh-cC
Confidence            38999999999999999999999999998888765 22 2232322     221 11  233333323322    22 24


Q ss_pred             CccEEEEccc
Q 019722          114 PLNLLINNAG  123 (336)
Q Consensus       114 ~id~lv~nAg  123 (336)
                      ++|+++.+.|
T Consensus       227 ~vd~vi~~~g  236 (350)
T cd08248         227 KFDVILDTVG  236 (350)
T ss_pred             CCCEEEECCC
Confidence            6999998876

Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>PRK05479 ketol-acid reductoisomerase; Provisional

Probab=94.47  E-value=0.43  Score=44.11  Aligned_cols=92  Identities=14%  Similarity=0.048  Sum_probs=55.9

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHH-------HhhCCCCceEEEeccCCCHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARL-------ASDCPGSDIVVLPLDLSSLSSVR  102 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l-------~~~~~~~~~~~~~~Dl~~~~~v~  102 (336)
                      ...+++|++.|.| .|.+|.++++.|.+.|++|++..|+..+..+..++.       ........+.++.+  - +....
T Consensus        12 ~~~L~gktIgIIG-~GsmG~AlA~~L~~sG~~Vvv~~r~~~~s~~~A~~~G~~~~s~~eaa~~ADVVvLaV--P-d~~~~   87 (330)
T PRK05479         12 LSLIKGKKVAIIG-YGSQGHAHALNLRDSGVDVVVGLREGSKSWKKAEADGFEVLTVAEAAKWADVIMILL--P-DEVQA   87 (330)
T ss_pred             hhhhCCCEEEEEe-eHHHHHHHHHHHHHCCCEEEEEECCchhhHHHHHHCCCeeCCHHHHHhcCCEEEEcC--C-HHHHH
Confidence            4558899999998 568999999999999999988877644333222211       11111234444432  2 23335


Q ss_pred             HHH-HHHHhcCCCccEEEEcccCC
Q 019722          103 NFV-SQFHSLNLPLNLLINNAGKF  125 (336)
Q Consensus       103 ~~~-~~~~~~~~~id~lv~nAg~~  125 (336)
                      .++ +++.....+=.+|++++|+.
T Consensus        88 ~V~~~~I~~~Lk~g~iL~~a~G~~  111 (330)
T PRK05479         88 EVYEEEIEPNLKEGAALAFAHGFN  111 (330)
T ss_pred             HHHHHHHHhcCCCCCEEEECCCCC
Confidence            555 55654433334678888853

>TIGR01763 MalateDH_bact malate dehydrogenase, NAD-dependent

Probab=94.45  E-value=0.86  Score=41.76  Aligned_cols=121  Identities=18%  Similarity=0.107  Sum_probs=65.6

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhhCCCCce-EEEeccCCCHHHHHHHHHHHHhcCC
Q 019722           36 VTAIITGATSGIGAETARVLAKRGA-RLVLPARSLKAAEEAKARLASDCPGSDI-VVLPLDLSSLSSVRNFVSQFHSLNL  113 (336)
Q Consensus        36 k~~lItGgs~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~-~~~~~Dl~~~~~v~~~~~~~~~~~~  113 (336)
                      +.+.|.|+ |.+|..+|..|+.+|. +|++++.+++..+.....+....+.... ..+.. -++   .+.        ..
T Consensus         2 ~KV~VIGa-G~vG~~iA~~la~~g~~~VvlvDi~~~l~~g~a~d~~~~~~~~~~~~~i~~-t~d---~~~--------~~   68 (305)
T TIGR01763         2 KKISVIGA-GFVGATTAFRLAEKELADLVLLDVVEGIPQGKALDMYEASPVGGFDTKVTG-TNN---YAD--------TA   68 (305)
T ss_pred             CEEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCCChhHHHHHhhhhhhhccCCCcEEEe-cCC---HHH--------hC
Confidence            35778886 8899999999999886 8999998766433222112111100000 00110 011   111        12


Q ss_pred             CccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCcccc
Q 019722          114 PLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSW  181 (336)
Q Consensus       114 ~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~  181 (336)
                      .-|++|.++|..... ..+   =.+.+..|..-...+++.+.++.        +++.||++|.+....
T Consensus        69 ~aDiVIitag~p~~~-~~s---R~~l~~~N~~iv~~i~~~I~~~~--------p~~~iIv~tNP~di~  124 (305)
T TIGR01763        69 NSDIVVITAGLPRKP-GMS---REDLLSMNAGIVREVTGRIMEHS--------PNPIIVVVSNPLDAM  124 (305)
T ss_pred             CCCEEEEcCCCCCCc-CCC---HHHHHHHHHHHHHHHHHHHHHHC--------CCeEEEEecCcHHHH
Confidence            579999999975332 111   12344555444444444444432        147888888875543

The annotation of Botryococcus braunii as lactate dehydrogenase appears top be in error. This was initially annotated as MDH by Swiss-Prot and then changed. The rationale for either of these annotations is not traceable.

>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1

Probab=94.42  E-value=0.25  Score=38.59  Aligned_cols=66  Identities=32%  Similarity=0.492  Sum_probs=44.4

Q ss_pred             hHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcC--CCccEEEEccc
Q 019722           46 GIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLN--LPLNLLINNAG  123 (336)
Q Consensus        46 gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~--~~id~lv~nAg  123 (336)
                      |||...++.+...|++|+++++++++.+.+. ++     +.. .+  .|-++.+    +.+++.+..  .++|++|.|+|
T Consensus         1 ~vG~~a~q~ak~~G~~vi~~~~~~~k~~~~~-~~-----Ga~-~~--~~~~~~~----~~~~i~~~~~~~~~d~vid~~g   67 (130)
T PF00107_consen    1 GVGLMAIQLAKAMGAKVIATDRSEEKLELAK-EL-----GAD-HV--IDYSDDD----FVEQIRELTGGRGVDVVIDCVG   67 (130)
T ss_dssp             HHHHHHHHHHHHTTSEEEEEESSHHHHHHHH-HT-----TES-EE--EETTTSS----HHHHHHHHTTTSSEEEEEESSS
T ss_pred             ChHHHHHHHHHHcCCEEEEEECCHHHHHHHH-hh-----ccc-cc--ccccccc----cccccccccccccceEEEEecC
Confidence            6899999999999999999999988765433 22     312 22  3343333    333333333  36999999998


Q ss_pred             C
Q 019722          124 K  124 (336)
Q Consensus       124 ~  124 (336)
                      .
T Consensus        68 ~   68 (130)
T PF00107_consen   68 S   68 (130)
T ss_dssp             S
T ss_pred             c
Confidence            3

1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....

>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3

Probab=94.41  E-value=0.14  Score=42.00  Aligned_cols=45  Identities=24%  Similarity=0.282  Sum_probs=34.1

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHH
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAK   76 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~   76 (336)
                      ..+.||+++|.| =|.+|+.+|+.|...|++|+++..++-++-++.
T Consensus        19 ~~l~Gk~vvV~G-YG~vG~g~A~~lr~~Ga~V~V~e~DPi~alqA~   63 (162)
T PF00670_consen   19 LMLAGKRVVVIG-YGKVGKGIARALRGLGARVTVTEIDPIRALQAA   63 (162)
T ss_dssp             S--TTSEEEEE---SHHHHHHHHHHHHTT-EEEEE-SSHHHHHHHH
T ss_pred             eeeCCCEEEEeC-CCcccHHHHHHHhhCCCEEEEEECChHHHHHhh
Confidence            347899999998 799999999999999999999999986654433

3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....

>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]

Probab=94.41  E-value=0.24  Score=44.97  Aligned_cols=76  Identities=20%  Similarity=0.236  Sum_probs=55.3

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCC-CHHHHHHHHHHHHhcC
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLS-SLSSVRNFVSQFHSLN  112 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~-~~~~v~~~~~~~~~~~  112 (336)
                      .|+++-|+|+.| ||.--++.--+.|++|++++++..+-+++.+.|     +....   .|.+ +++.++++.+.+   .
T Consensus       181 pG~~vgI~GlGG-LGh~aVq~AKAMG~rV~vis~~~~kkeea~~~L-----GAd~f---v~~~~d~d~~~~~~~~~---d  248 (360)
T KOG0023|consen  181 PGKWVGIVGLGG-LGHMAVQYAKAMGMRVTVISTSSKKKEEAIKSL-----GADVF---VDSTEDPDIMKAIMKTT---D  248 (360)
T ss_pred             CCcEEEEecCcc-cchHHHHHHHHhCcEEEEEeCCchhHHHHHHhc-----Cccee---EEecCCHHHHHHHHHhh---c
Confidence            799999999887 998888877788999999999987777777766     33322   2455 777777776643   3


Q ss_pred             CCccEEEEc
Q 019722          113 LPLNLLINN  121 (336)
Q Consensus       113 ~~id~lv~n  121 (336)
                      +.+|.+++-
T Consensus       249 g~~~~v~~~  257 (360)
T KOG0023|consen  249 GGIDTVSNL  257 (360)
T ss_pred             Ccceeeeec
Confidence            445555543

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	336
3rd5_A	291	Crystal Structure Of A Putative Uncharacterized Pro		3e-15
3tzq_B	271	Crystal Structure Of A Short-Chain Type Dehydrogena		9e-04

>pdb|3RD5|A Chain A, Crystal Structure Of A Putative Uncharacterized Protein From Mycobacterium Paratuberculosis Length = 291

Iteration: 1
 Score = 79.0 bits (193), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 80/301 (26%), Positives = 115/301 (38%), Gaps = 37/301 (12%)
Query: 30  CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPXXXXXXXXXXXXXXXXDCPGSDIX 89
            P+ +  T +ITGA SG+GA TAR LA+RGA +++                      ++ 
Sbjct: 11  LPSFAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTMAGQVEVRELD 70
Query: 90  XXXXXXXXXXXXRNFVSQFHSXXXXXXXXXXXAGKFAHQHAISEDGIEMTFATNYLGHFX 149
                          V +F             AG  A  +A++ DG E    TN+LGHF 
Sbjct: 71  LQDLSS---------VRRFADGVSGADVLINNAGIMAVPYALTVDGFESQIGTNHLGHFA 121
Query: 150 XXXXXXXXMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALS 209
                   + +         R+V VSS  H W     +  L   SR    Y    AY+ S
Sbjct: 122 LTNLLLPRLTD---------RVVTVSSMAH-WPGRINLEDLNWRSR---RYSPWLAYSQS 168
Query: 210 KLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSKLLKTIP 269
           KLAN+L T EL +RL    + +     HPG   T L       + D +    ++++ T  
Sbjct: 169 KLANLLFTSELQRRLTAAGSPLRALAAHPGYSHTNLQGASGRKLGDALMSAATRVVATDA 228
Query: 270 Q-GAATTCYVA---------IHPRLVNVSGKYFADCNEAWTSKLGSNSNEASRLWAASEL 319
             GA  T Y A         + PR       Y         S+   ++  A+ LWA SE 
Sbjct: 229 DFGARQTLYAASQDLPGDSFVGPRF-----GYLGRTQPVGRSRRAKDAGMAAALWALSEQ 283
Query: 320 L 320
           L
Sbjct: 284 L 284

>pdb|3TZQ|B Chain B, Crystal Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Marinum Length = 271

Iteration: 1
 Score = 41.2 bits (95), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 21/33 (63%), Positives = 25/33 (75%)
Query: 32 NLSSVTAIITGATSGIGAETARVLAKRGARLVL 64
           L +  AIITGA  GIG ET+RVLA+ GAR+VL
Sbjct: 8  ELENKVAIITGACGGIGLETSRVLARAGARVVL 40

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	336
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	1e-105
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	4e-80
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	2e-63
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	1e-38
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	8e-38
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	1e-37
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	2e-37
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	2e-36
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	8e-36
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	8e-36
1xhl_A	297	Short-chain dehydrogenase/reductase family member	2e-35
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	2e-35
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	3e-35
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	4e-35
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	4e-35
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	8e-35
1spx_A	278	Short-chain reductase family member (5L265); paral	8e-35
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	2e-34
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	4e-34
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	1e-33
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	2e-33
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	2e-33
1xkq_A	280	Short-chain reductase family member (5D234); parra	2e-33
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	2e-33
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	4e-33
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	9e-33
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	1e-32
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	1e-32
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	2e-32
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	3e-32
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	4e-32
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	4e-32
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	5e-32
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	7e-32
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	8e-32
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	1e-31
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	1e-31
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	2e-31
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	2e-31
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	3e-31
3imf_A	257	Short chain dehydrogenase; structural genomics, in	4e-31
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	4e-31
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	4e-31
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	5e-31
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	6e-31
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	7e-31
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	8e-31
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	1e-30
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	1e-30
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	1e-30
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	1e-30
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	1e-30
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	1e-30
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	1e-30
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	1e-30
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	1e-30
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	1e-30
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	2e-30
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	2e-30
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	2e-30
3rih_A	293	Short chain dehydrogenase or reductase; structural	2e-30
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	2e-30
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	2e-30
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	3e-30
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	3e-30
4dqx_A	277	Probable oxidoreductase protein; structural genomi	3e-30
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	3e-30
1xq1_A	266	Putative tropinone reducatse; structural genomics,	4e-30
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	4e-30
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	4e-30
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	4e-30
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	5e-30
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	5e-30
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	5e-30
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	5e-30
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	5e-30
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	6e-30
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	6e-30
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	7e-30
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	8e-30
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	1e-29
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	2e-29
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	2e-29
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	2e-29
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	2e-29
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	2e-29
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	2e-29
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	3e-29
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	3e-29
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	3e-29
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	3e-29
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	3e-29
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	4e-29
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	4e-29
4e4y_A	244	Short chain dehydrogenase family protein; structur	4e-29
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	5e-29
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	5e-29
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	5e-29
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	6e-29
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	7e-29
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	8e-29
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	8e-29
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	9e-29
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	9e-29
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	9e-29
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	1e-28
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	1e-28
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	1e-28
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	2e-28
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	2e-28
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	2e-28
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	2e-28
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	2e-28
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	2e-28
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	3e-28
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	3e-28
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	3e-28
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	3e-28
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	3e-28
3cxt_A	291	Dehydrogenase with different specificities; rossma	4e-28
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	4e-28
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	5e-28
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	7e-28
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	7e-28
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	8e-28
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	1e-27
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	2e-27
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	2e-27
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	2e-27
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	2e-27
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	2e-27
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	2e-27
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	3e-27
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	6e-27
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	7e-27
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	8e-27
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	1e-26
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	1e-26
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	2e-26
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	2e-26
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	2e-26
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	2e-26
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	2e-26
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	2e-26
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	3e-26
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	3e-26
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	4e-26
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	5e-26
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	7e-26
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	8e-26
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	9e-26
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	1e-25
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	1e-25
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	2e-25
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	3e-25
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	5e-25
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	6e-25
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	1e-24
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	1e-24
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	2e-24
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	2e-24
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	3e-24
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	4e-24
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	6e-24
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	7e-24
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	8e-24
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	1e-23
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	3e-23
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	7e-23
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	1e-22
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	2e-22
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	2e-22
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	2e-22
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	3e-22
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	3e-22
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	4e-22
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	1e-21
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	2e-21
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	4e-20
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	8e-20
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	9e-20
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	6e-19
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	5e-16
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	3e-14
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	4e-11
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	4e-14
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	5e-13
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	5e-12
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	9e-11
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-09
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	9e-05
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	6e-06
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	7e-06
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	9e-06
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	1e-05
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	1e-05
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	7e-05

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} Length = 291

 Score =  308 bits (791), Expect = e-105
 Identities = 98/311 (31%), Positives = 138/311 (44%), Gaps = 31/311 (9%)

Query: 16  GYGSKSTAEQVTDGCPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEA 75
           G  +  TA  +    P+ +  T +ITGA SG+GA TAR LA+RGA +++  R  +  E A
Sbjct: 1   GSMTGWTAADL----PSFAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAA 56

Query: 76  KARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAISEDG 135
              +        + V  LDL  LSSVR F       ++    LINNAG  A  +A++ DG
Sbjct: 57  ARTM-----AGQVEVRELDLQDLSSVRRFADGVSGADV----LINNAGIMAVPYALTVDG 107

Query: 136 IEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISR 195
            E    TN+LGHF LT LLL ++           R+V VSS  H     +    L  ++ 
Sbjct: 108 FESQIGTNHLGHFALTNLLLPRL---------TDRVVTVSSMAHWPGRIN----LEDLNW 154

Query: 196 NKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITD 255
               Y    AY+ SKLAN+L T EL +RL    + +     HPG   T L       + D
Sbjct: 155 RSRRYSPWLAYSQSKLANLLFTSELQRRLTAAGSPLRALAAHPGYSHTNLQGASGRKLGD 214

Query: 256 LVFFLTSKLL-KTIPQGAATTCYVAIHP----RLVNVSGKYFADCNEAWTSKLGSNSNEA 310
            +    ++++      GA  T Y A         V     Y         S+   ++  A
Sbjct: 215 ALMSAATRVVATDADFGARQTLYAASQDLPGDSFVGPRFGYLGRTQPVGRSRRAKDAGMA 274

Query: 311 SRLWAASELLV 321
           + LWA SE L 
Sbjct: 275 AALWALSEQLT 285

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* Length = 276

 Score =  244 bits (624), Expect = 4e-80
 Identities = 64/292 (21%), Positives = 107/292 (36%), Gaps = 53/292 (18%)

Query: 37  TAIITGATSGIGAETARVLAKR-GARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDL 95
            A++TG   GIG    R L +     +VL AR +   + A  +L ++  G       LD+
Sbjct: 6   VALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAE--GLSPRFHQLDI 63

Query: 96  SSLSSVRNFVSQFHSLNLPLNLLINNAGKFA--HQHAISEDGIEMTFATNYLGHFLLTKL 153
             L S+R            L++L+NNAG               E+T  TN+ G   +   
Sbjct: 64  DDLQSIRALRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTE 123

Query: 154 LLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISR------------------ 195
           LL  +         QGR+VNVSS +           L Q  R                  
Sbjct: 124 LLPLIKP-------QGRVVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKFVE 176

Query: 196 ------NKSHYDATRAYALSKLANVLHTKELAQRLKQMEA--NVTVNCVHPGIVRTRLTR 247
                 ++     + AY ++K+   + ++  A++L +      + +N   PG VRT +  
Sbjct: 177 DTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAG 236

Query: 248 EREGFITDLVFFLTSKLLKTIPQGAATTCYVA-IHPRLVNVSGKYFADCNEA 298
                          K  K+  +GA T  Y+A + P      G++ ++    
Sbjct: 237 --------------PKATKSPEEGAETPVYLALLPPDAEGPHGQFVSEKRVE 274

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} Length = 311

 Score =  202 bits (516), Expect = 2e-63
 Identities = 62/321 (19%), Positives = 108/321 (33%), Gaps = 84/321 (26%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLS 96
            A++TG   GIG E  + L+  G  +VL  R +    EA  +L +     ++V   LD++
Sbjct: 14  CAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNS-NHENVVFHQLDVT 72

Query: 97  S-LSSVRNFVSQFHSLNLPLNLLINNAG-------------------------------- 123
             ++++ +      +    L++L+NNAG                                
Sbjct: 73  DPIATMSSLADFIKTHFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKP 132

Query: 124 KFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFS 183
           +     + + +  E     NY G   +T++L+  +  +        RIVNVSSS  S   
Sbjct: 133 EAQELMSETYELAEECLKINYNGVKSVTEVLIPLLQLSD-----SPRIVNVSSSTGSLKY 187

Query: 184 GDMIRYLGQISRNKS--------------------------HYDATRAYALSKLANVLHT 217
                 L  +    +                                AY  SK     +T
Sbjct: 188 VSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKACLNAYT 247

Query: 218 KELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSKLLKTIPQGAATTCY 277
           + LA ++        VNCV PG+V+T +                     T  +GA     
Sbjct: 248 RVLANKIP----KFQVNCVCPGLVKTEMNYGIGN--------------YTAEEGAEHVVR 289

Query: 278 VAIHPRLVNVSGKYFADCNEA 298
           +A+ P     SG ++     +
Sbjct: 290 IALFPDD-GPSGFFYDCSELS 309

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* Length = 259

 Score =  137 bits (346), Expect = 1e-38
 Identities = 61/261 (23%), Positives = 89/261 (34%), Gaps = 48/261 (18%)

Query: 33  LSSVTAIITGATSGIGAETARVLAK---RGARLVLPARSLKAAEEAKARLASDCPGSDIV 89
           L     ++TGA+ G G   A  LA+    G+ +++ ARS     + K  L +  P   +V
Sbjct: 4   LGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVV 63

Query: 90  VLPLDLSSLSSVRNFVSQ----FHSLNLPLNLLINNAG-----KFAHQHAISEDGIEMTF 140
           +   DL + + V+  +S          L   LLINNA           +      +   +
Sbjct: 64  LAAADLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYW 123

Query: 141 ATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSS-----SIHSWFSGDMIRYLGQISR 195
           A N      LT   L        + G+   +VN+SS         W              
Sbjct: 124 ALNLTSMLCLTSGTLNAFQ---DSPGLSKTVVNISSLCALQPYKGW-------------- 166

Query: 196 NKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITD 255
               Y A +A A   L  VL   E        E +V V    PG +   + +       D
Sbjct: 167 --GLYCAGKA-ARDMLYQVLA-AE--------EPSVRVLSYAPGPLDNDMQQLARETSKD 214

Query: 256 LVFFLTSKLLKTIPQGAATTC 276
               L SKL K    GA   C
Sbjct: 215 --PELRSKLQKLKSDGALVDC 233

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* Length = 265

 Score =  134 bits (341), Expect = 8e-38
 Identities = 52/250 (20%), Positives = 86/250 (34%), Gaps = 37/250 (14%)

Query: 32  NLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVL 91
           +LS   A++TG +SGIG  T  +L + GA +   AR  +    A++ L    PG+ +   
Sbjct: 5   DLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFAS 64

Query: 92  PLDLSSLSSVRNFVSQFHSLNLPLNLLINNAG--KFAHQHAISEDGIEMTFATNYLGHFL 149
             D+     VR F           ++L+NNAG  + +     +++         +     
Sbjct: 65  VCDVLDALQVRAFAEACERTLGCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIH 124

Query: 150 LTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRA--YA 207
             +  L ++   A        IV V+S                         A RA    
Sbjct: 125 PVRAFLPQLESRAD-----AAIVCVNSL-----LASQPEP-HM-----VATSAARAGVKN 168

Query: 208 LSK-LANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRE-----REGFITDLVFFLT 261
           L + +A      E A +       V VN +  G+V +   R       E  +    +   
Sbjct: 169 LVRSMA-----FEFAPK------GVRVNGILIGLVESGQWRRRFEAREERELDWAQWTAQ 217

Query: 262 SKLLKTIPQG 271
               K IP G
Sbjct: 218 LARNKQIPLG 227

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* Length = 263

 Score =  134 bits (340), Expect = 1e-37
 Identities = 52/217 (23%), Positives = 92/217 (42%), Gaps = 33/217 (15%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLS 96
            A+ITG++SGIG   A   AK GA +VL AR +    EA   L     G  ++ + +D++
Sbjct: 9   VAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEK-FGVRVLEVAVDVA 67

Query: 97  SLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLL 154
           +   V   V    S     ++L+NNAG  +++     +++  +  +    +    L + L
Sbjct: 68  TPEGVDAVVESVRSSFGGADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGL 127

Query: 155 LKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRA--YALSK-L 211
           +  M          G I++ +S               Q    +  Y+ T+A     SK L
Sbjct: 128 VPGMRARGG-----GAIIHNASI-----CAV------QPLWYEPIYNVTKAALMMFSKTL 171

Query: 212 ANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRE 248
           A      E+ +       N+ VNC++PG++ T    +
Sbjct: 172 A-----TEVIKD------NIRVNCINPGLILTPDWIK 197

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} Length = 267

 Score =  133 bits (338), Expect = 2e-37
 Identities = 56/222 (25%), Positives = 95/222 (42%), Gaps = 36/222 (16%)

Query: 32  NLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVL 91
            L   TA++TG+T+GIG   A  L   GA +++  R  +   E    + +  P + +  +
Sbjct: 7   QLKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPV 66

Query: 92  PLDLSSLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFL 149
             DL +    ++ + ++      +++LINN G F       I ++     F  N +    
Sbjct: 67  VADLGTEQGCQDVIEKYPK----VDILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVR 122

Query: 150 LTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRA--YA 207
           LT+  LKKMIE  +     GR++ ++S      +  M       S+  +HY AT+    +
Sbjct: 123 LTRSYLKKMIERKE-----GRVIFIASE-----AAIM------PSQEMAHYSATKTMQLS 166

Query: 208 LSK-LANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRE 248
           LS+ LA     +           NVTVN + PG   T     
Sbjct: 167 LSRSLA-----ELTTGT------NVTVNTIMPGSTLTEGVET 197

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} Length = 235

 Score =  130 bits (328), Expect = 2e-36
 Identities = 40/218 (18%), Positives = 83/218 (38%), Gaps = 34/218 (15%)

Query: 33  LSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLP 92
           +S    I+TGA SG+G      L +RG ++ +  R  +  ++ +  L     G+ ++ + 
Sbjct: 1   MSLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLL-----GNAVIGIV 55

Query: 93  LDLSSLSSVRNFVSQFHSLNLPLNLLINNAG--KFAHQHAISEDGIEMTFATNYLGHFLL 150
            DL+    V    +          L+++ AG  +F      + + I     +N +   L+
Sbjct: 56  ADLAHHEDVDVAFAAAVEWGGLPELVLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILV 115

Query: 151 TKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISR-NKSHYDATRAYALS 209
            +  ++ + E        G + NV SS              Q+ + N+S Y A++   + 
Sbjct: 116 AQQTVRLIGERG------GVLANVLSS------------AAQVGKANESLYCASKW-GMR 156

Query: 210 KLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTR 247
                L   EL          + +  ++P  +R+    
Sbjct: 157 GFLESLR-AELKDS------PLRLVNLYPSGIRSEFWD 187

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 250

 Score =  129 bits (326), Expect = 8e-36
 Identities = 63/232 (27%), Positives = 96/232 (41%), Gaps = 36/232 (15%)

Query: 34  SSVTAIITGATSGIGAETARVLAKRGA--RLVLPARSLKAAEEAKARLASDCPGSDIVVL 91
           S  + ++TGA  GIG    + L K      ++  AR ++ A E K+        S + VL
Sbjct: 2   SPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSI-----KDSRVHVL 56

Query: 92  PLDLSSLSSVRNFVSQFHSL--NLPLNLLINNAG---KFAHQHAISEDGIEMTFATNYLG 146
           PL ++   S+  FVS+   +  +  L+LLINNAG    +      +   I      N   
Sbjct: 57  PLTVTCDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTS 116

Query: 147 HFLLTKLLL------KKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHY 200
             LLT+ LL             + +  +  ++ +SS             LG I+ N S  
Sbjct: 117 VVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSG------------LGSITDNTSGS 164

Query: 201 DATR--AYALSKLA-NVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRER 249
                 AY +SK A N+   + LA  LK  + NV V    PG V+T L  + 
Sbjct: 165 AQFPVLAYRMSKAAINMF-GRTLAVDLK--DDNVLVVNFCPGWVQTNLGGKN 213

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... Length = 286

 Score =  130 bits (328), Expect = 8e-36
 Identities = 47/213 (22%), Positives = 82/213 (38%), Gaps = 26/213 (12%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLS 96
             I+TGA+ GIG E A  LAK GA +V+ ARS +  ++  +        +    +   + 
Sbjct: 30  KVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLE-LGAASAHYIAGTME 88

Query: 97  SLSSVRNFVSQFHSLNLPLNLLINNAG--KFAHQHAISEDGIEMTFATNYLGHFLLTKLL 154
            ++    FV+Q   L   L++LI N       +        +  +   N+L + +LT   
Sbjct: 89  DMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAA 148

Query: 155 LKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLANV 214
           L  + ++       G IV VSS              G+++          AY+ SK A  
Sbjct: 149 LPMLKQS------NGSIVVVSS------------LAGKVAYPMVA-----AYSASKFALD 185

Query: 215 LHTKELAQRLKQMEANVTVNCVHPGIVRTRLTR 247
                + +       NV++     G++ T    
Sbjct: 186 GFFSSIRKEYSVSRVNVSITLCVLGLIDTETAM 218

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 297

 Score =  129 bits (327), Expect = 2e-35
 Identities = 61/246 (24%), Positives = 100/246 (40%), Gaps = 39/246 (15%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARL-ASDCPGSDIVVLPLDL 95
           + IITG+++GIG   A + AK GA++ +  R+    EE K ++  +  P   I  +  D+
Sbjct: 28  SVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADV 87

Query: 96  SSLSSVRNFVSQ----FHSLNLPLNLLINNAG----KFAHQHAISEDGIEMTFATNYLGH 147
           +  S   + ++     F      +++L+NNAG              +  + TF  N+   
Sbjct: 88  TEASGQDDIINTTLAKFGK----IDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAV 143

Query: 148 FLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYA 207
             +T+   + +I+T      +G IVNV SSI +          G              YA
Sbjct: 144 IEMTQKTKEHLIKT------KGEIVNV-SSIVAGPQAHS----GYP-----------YYA 181

Query: 208 LSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRE--REGFITDLVFFLTSKLL 265
            +K A   +T+  A  L Q    V VN V PG V T            +D ++       
Sbjct: 182 CAKAALDQYTRCTAIDLIQ--HGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRK 239

Query: 266 KTIPQG 271
           + IP G
Sbjct: 240 ECIPVG 245

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 Length = 244

 Score =  127 bits (323), Expect = 2e-35
 Identities = 57/246 (23%), Positives = 99/246 (40%), Gaps = 48/246 (19%)

Query: 32  NLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVL 91
           N S + A++TGA  GIG +T + L   GA++V   R+                   I  +
Sbjct: 4   NFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKE------CPGIEPV 57

Query: 92  PLDLSSLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHA--ISEDGIEMTFATNYLGHFL 149
            +DL    +    +        P++LL+NNA     Q    ++++  + +F+ N    F 
Sbjct: 58  CVDLGDWDATEKALGGIG----PVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQ 113

Query: 150 LTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALS 209
           +++++ + MI      G+ G IVNVSS         M+ ++   +           Y+ +
Sbjct: 114 VSQMVARDMI----NRGVPGSIVNVSS---------MVAHVTFPNLI--------TYSST 152

Query: 210 KLANVLHTK----ELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSKLL 265
           K A  + TK    EL          + VN V+P +V T +    +    D  F    KL 
Sbjct: 153 KGAMTMLTKAMAMELGPH------KIRVNSVNPTVVLTDMG---KKVSADPEF--ARKLK 201

Query: 266 KTIPQG 271
           +  P  
Sbjct: 202 ERHPLR 207

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} Length = 260

 Score =  127 bits (322), Expect = 3e-35
 Identities = 50/248 (20%), Positives = 95/248 (38%), Gaps = 45/248 (18%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLS 96
            A++T  +SG+G  +A  LA+ GARL+L +R+ +  E A +R+AS   G+ + ++  D+ 
Sbjct: 9   LAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIR 68

Query: 97  SLSSVRNFVSQFHSLNLPLNLLINNAG--KFAHQHAISEDGIEMTFATNYLGHFLLTKLL 154
               +     +   L    ++L+ + G  +      +  +  + ++         + +  
Sbjct: 69  EPGDIDRLFEKARDLG-GADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRA 127

Query: 155 LKKMIETAKATGIQGRIVNVSSSIHSWFSGDM-IRYLGQISRNKSHYDATRA--YALSK- 210
            ++M+E        GR+V + S      +     + L          +  R     + + 
Sbjct: 128 AEQMVEKG-----WGRMVYIGSV-----TLLRPWQDLA-------LSNIMRLPVIGVVRT 170

Query: 211 LANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTR-------EREGFITDLVFFLTSK 263
           LA      ELA         VTVN V P ++ T   R        R G   +        
Sbjct: 171 LA-----LELAPH------GVTVNAVLPSLILTDRVRSLAEERARRSGITVEEA---LKS 216

Query: 264 LLKTIPQG 271
           +   IP G
Sbjct: 217 MASRIPMG 224

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 Length = 272

 Score =  127 bits (322), Expect = 4e-35
 Identities = 59/214 (27%), Positives = 86/214 (40%), Gaps = 27/214 (12%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLS 96
             +ITGA  GIG  TA   AK  ++LVL   +    EE  A+      G+ +    +D S
Sbjct: 33  IVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGL--GAKVHTFVVDCS 90

Query: 97  SLSSVRNFVSQFHSLNLPLNLLINNAG--KFAHQHAISEDGIEMTFATNYLGHFLLTKLL 154
           +   + +   +  +    +++L+NNAG    +   A  +  IE TF  N L HF  TK  
Sbjct: 91  NREDIYSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAF 150

Query: 155 LKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLANV 214
           L  M +        G IV V+S+             G +S          AY  SK A V
Sbjct: 151 LPAMTKNNH-----GHIVTVASA------------AGHVSVPFL-----LAYCSSKFAAV 188

Query: 215 LHTKELAQRLKQMEA-NVTVNCVHPGIVRTRLTR 247
              K L   L  ++   V   C+ P  V T   +
Sbjct: 189 GFHKTLTDELAALQITGVKTTCLCPNFVNTGFIK 222

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* Length = 244

 Score =  127 bits (321), Expect = 4e-35
 Identities = 53/241 (21%), Positives = 92/241 (38%), Gaps = 48/241 (19%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLS 96
             ++TGA  GIG  T + L   GAR+V  +R+    +              I  + +DL 
Sbjct: 9   RVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRE------CPGIEPVCVDLG 62

Query: 97  SLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHA--ISEDGIEMTFATNYLGHFLLTKLL 154
              +    +        P++LL+NNA     Q    ++++  + +F  N      +++++
Sbjct: 63  DWEATERALGSVG----PVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIV 118

Query: 155 LKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLANV 214
            + +I    A G+ G IVNVSS                 + +         Y  +K A  
Sbjct: 119 ARGLI----ARGVPGAIVNVSS---------QCSQRAVTNHS--------VYCSTKGALD 157

Query: 215 LHTK----ELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSKLLKTIPQ 270
           + TK    EL          + VN V+P +V T +    +   +D        +L  IP 
Sbjct: 158 MLTKVMALELGPH------KIRVNAVNPTVVMTSMG---QATWSDPHK--AKTMLNRIPL 206

Query: 271 G 271
           G
Sbjct: 207 G 207

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} Length = 250

 Score =  126 bits (319), Expect = 8e-35
 Identities = 51/223 (22%), Positives = 87/223 (39%), Gaps = 34/223 (15%)

Query: 32  NLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARL-ASDCPGSDIVV 90
                 AIITGA+ GIGA  A  LA  G R+VL ARS +  E+    +  S+    + +V
Sbjct: 4   EKQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIV 63

Query: 91  LPLDLSSLSSVRNFVSQFHSLNLPLNLLINNAG--KFAHQHAISEDGIEMTFATNYLGHF 148
           LPLD++  +     +   H     +++L+N A            ++        N +  +
Sbjct: 64  LPLDITDCTKADTEIKDIHQKYGAVDILVNAAAMFMDGSLSEPVDN-FRKIMEINVIAQY 122

Query: 149 LLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRA--Y 206
            + K + + M          G I NV+S      +     +          Y +T+    
Sbjct: 123 GILKTVTEIMKVQKN-----GYIFNVASR-----AAKYG-FADG-----GIYGSTKFALL 166

Query: 207 ALSK-LANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRE 248
            L++ L      +ELA         + V  + PG V T + ++
Sbjct: 167 GLAESLY-----RELAPL------GIRVTTLCPGWVNTDMAKK 198

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 278

 Score =  127 bits (321), Expect = 8e-35
 Identities = 55/223 (24%), Positives = 93/223 (41%), Gaps = 39/223 (17%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARL-ASDCPGSDIVVLPLDL 95
            AIITG+++GIG  TA + A+ GA++ +  R  +  EE + ++ A+     ++  +  D+
Sbjct: 8   VAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADV 67

Query: 96  SSLSSVRNFVSQ----FHSLNLPLNLLINNAG------KFAHQHAISEDGIEMTFATNYL 145
           ++ +     +S     F      L++L+NNAG      +     A S +  + T   N  
Sbjct: 68  TTDAGQDEILSTTLGKFGK----LDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLR 123

Query: 146 GHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRA 205
               LTK  +  +  T       G IVN+ SSI S                         
Sbjct: 124 SVIALTKKAVPHLSSTK------GEIVNI-SSIASGLHATP----DFP-----------Y 161

Query: 206 YALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRE 248
           Y+++K A   +T+  A  L Q    + VN + PG+V T     
Sbjct: 162 YSIAKAAIDQYTRNTAIDLIQ--HGIRVNSISPGLVATGFGSA 202

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* Length = 258

 Score =  125 bits (316), Expect = 2e-34
 Identities = 58/248 (23%), Positives = 97/248 (39%), Gaps = 37/248 (14%)

Query: 31  PNLSSVTAIITGATSGIGAETARVLAKRGARLVLP-ARSLKAAEEAKARLASDCPGSDIV 89
           P+L     +ITG++ GIG  TAR+ A+ GA++ L   ++    +E  A + +D  G D  
Sbjct: 3   PDLKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRAD--GGDAA 60

Query: 90  VLPLDLSSLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQ---HAISEDGIEMTFATNYLG 146
               DL++  + +  V +F +    +++LINNAG    +     I +   +     N   
Sbjct: 61  FFAADLATSEACQQLVDEFVAKFGGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRS 120

Query: 147 HFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRA- 205
             + TK  L  +   AKA+G    +++  S      +G      G        Y A +A 
Sbjct: 121 VVMTTKFALPHLAAAAKASGQTSAVISTGS-----IAGHTGGGPGA-----GLYGAAKAF 170

Query: 206 -YALSK-LANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSK 263
            + + K            +        V  N V PG V T    +     T  V     +
Sbjct: 171 LHNVHKNWV-----DFHTKD------GVRFNIVSPGTVDTAFHAD----KTQDV---RDR 212

Query: 264 LLKTIPQG 271
           +   IP G
Sbjct: 213 ISNGIPMG 220

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} Length = 266

 Score =  124 bits (315), Expect = 4e-34
 Identities = 70/262 (26%), Positives = 101/262 (38%), Gaps = 39/262 (14%)

Query: 16  GYGSKSTAEQVTDGCPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEA 75
           G GS +T +    G   L    A+ITGAT GIGA+ AR  A  GARLVL  R +   + A
Sbjct: 1   GPGSMTTTDDRYAGVLRLDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAA 60

Query: 76  KARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHA--ISE 133
           +  L     G+D+  + +DL+   +      +       L++L+NNAG    Q       
Sbjct: 61  RRALGEQ-FGTDVHTVAIDLAEPDAPAELARRAAEAFGGLDVLVNNAGISHPQPVVDTDP 119

Query: 134 DGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQI 193
              + T A N     LL   + K M+    A G  G I+ V+S                 
Sbjct: 120 QLFDATIAVNLRAPALLASAVGKAMV----AAGEGGAIITVAS---------AAALAPLP 166

Query: 194 SRNKSHYDATRAYALSKLANVLHTK----ELAQRLKQMEANVTVNCVHPGIVRTRLTRER 249
                      AY  SK   V+ TK    EL          +  N V P +V T +    
Sbjct: 167 DHY--------AYCTSKAGLVMATKVLARELGPH------GIRANSVCPTVVLTEMG--- 209

Query: 250 EGFITDLVFFLTSKLLKTIPQG 271
           +    D     ++ ++  IP G
Sbjct: 210 QRVWGDEAK--SAPMIARIPLG 229

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} Length = 281

 Score =  124 bits (313), Expect = 1e-33
 Identities = 63/262 (24%), Positives = 97/262 (37%), Gaps = 53/262 (20%)

Query: 32  NLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVL 91
           ++ + TA+ITG+TSGIG   AR LAK GA +VL                +      ++  
Sbjct: 22  SMMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHH 81

Query: 92  PLDLSSLSSVRNFVSQFHSLNLPLNLLINNAG--KFAHQHAISEDGIEMTFATNYLGHFL 149
           P D++  S + + ++         ++L+NNAG            +  +   A N    F 
Sbjct: 82  PADMTKPSEIADMMAMVADRFGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFH 141

Query: 150 LTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQI-SRNKSHYDA------ 202
             +  +  M +        GRI+N+ +S H           G + S  KS Y A      
Sbjct: 142 TIRGAIPPMKKKGW-----GRIINI-ASAH-----------GLVASPFKSAYVAAKHGIM 184

Query: 203 --TRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTR-------EREGFI 253
             T+  AL          E+A+        VTVN + PG V T L            G  
Sbjct: 185 GLTKTVAL----------EVAES------GVTVNSICPGYVLTPLVEKQIPDQARTRGIT 228

Query: 254 TDLVFFLTSKLLKTIPQGAATT 275
            + V  +   +LK  P     T
Sbjct: 229 EEQV--INEVMLKGQPTKKFIT 248

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} Length = 230

 Score =  122 bits (308), Expect = 2e-33
 Identities = 47/255 (18%), Positives = 85/255 (33%), Gaps = 42/255 (16%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLS 96
             +ITGA+SG+GAE A++    G    L  RS          L      +++     DL+
Sbjct: 3   LIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCL-----SNNVGYRARDLA 57

Query: 97  SLSSVRNFVSQFHSLNLPLNLLINNAG--KFAHQHAISEDGIEMTFATNYLGHFLLTKLL 154
           S   V     Q  S     + ++++AG   F        + I+     N      + + L
Sbjct: 58  SHQEVEQLFEQLDS---IPSTVVHSAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLREL 114

Query: 155 LKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLANV 214
           +K+  +          +V + S+     +    +         S Y A +      L   
Sbjct: 115 VKRYKDQ------PVNVVMIMST-----AAQQPKAQE------STYCAVKWAVKG-LIES 156

Query: 215 LHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSKLLKTIPQGAAT 274
           +   EL  +       + +  V+PG + T    E  G   D   F++++        A  
Sbjct: 157 VR-LELKGK------PMKIIAVYPGGMATEFW-ETSGKSLDTSSFMSAE------DAALM 202

Query: 275 TCYVAIHPRLVNVSG 289
                 +     VS 
Sbjct: 203 IHGALANIGNGYVSD 217

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} Length = 273

 Score =  123 bits (311), Expect = 2e-33
 Identities = 53/238 (22%), Positives = 86/238 (36%), Gaps = 35/238 (14%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLS 96
            A+ITGATSGIG   A+     GAR+ +  R     + A A +     G   V +  D +
Sbjct: 31  IAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEI-----GGGAVGIQADSA 85

Query: 97  SLSSVRNFVSQFHSLNLPLNLLINNAG--KFAHQHAISEDGIEMTFATNYLGHFLLTKLL 154
           +L+ +     +  +    +++L  NAG         ++E+  + TF  N  G     +  
Sbjct: 86  NLAELDRLYEKVKAEAGRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKA 145

Query: 155 LKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQI-SRNKSHYDATRAYALSKLAN 213
           L  +            +V   S+             G   +   S Y A++A AL   A 
Sbjct: 146 LPLLAR-------GSSVVLTGST------------AGSTGTPAFSVYAASKA-ALRSFAR 185

Query: 214 VLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSKLLKTIPQG 271
                +L  R       + +N + PG   T    E  G        L + L   +P G
Sbjct: 186 NW-ILDLKDR------GIRINTLSPGPTETTGLVELAGKDPVQQQGLLNALAAQVPMG 236

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 280

 Score =  123 bits (311), Expect = 2e-33
 Identities = 54/233 (23%), Positives = 93/233 (39%), Gaps = 47/233 (20%)

Query: 31  PNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARL-ASDCPGSDIV 89
           P  S+ T IITG+++GIG  TA + A+ GA + +  RS +  EE +  +  S      + 
Sbjct: 2   PRFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVN 61

Query: 90  VLPLDLSSLSSVRNFVSQ----FHSLNLPLNLLINNAG--KFAHQHAISEDGIEMTF--- 140
            +  D+++       ++     F      +++L+NNAG            D     +   
Sbjct: 62  SVVADVTTEDGQDQIINSTLKQFGK----IDVLVNNAGAAIPDAFGTTGTDQGIDIYHKT 117

Query: 141 -ATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSH 199
              N      +TK +   ++ +      +G IVNV SSI +            +      
Sbjct: 118 LKLNLQAVIEMTKKVKPHLVAS------KGEIVNV-SSIVAGPQAQP----DFL------ 160

Query: 200 YDATRAYALSKLANVLHTK----ELAQRLKQMEANVTVNCVHPGIVRTRLTRE 248
                 YA++K A   +T+    +LA+        + VN V PG+V T  T  
Sbjct: 161 -----YYAIAKAALDQYTRSTAIDLAKF------GIRVNSVSPGMVETGFTNA 202

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 Length = 267

 Score =  123 bits (310), Expect = 2e-33
 Identities = 54/237 (22%), Positives = 87/237 (36%), Gaps = 28/237 (11%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLS 96
            A++TGA  GIG   A  L  +GA++ L   +L+A  + KA L         + +  D++
Sbjct: 9   VALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVA 68

Query: 97  SLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAI-SEDGIEMTFATNYLGHFLLTKLLL 155
               +R+   +       L++L+NNAG       + +E   E T   N +     T L L
Sbjct: 69  DQQQLRDTFRKVVDHFGRLDILVNNAG-------VNNEKNWEKTLQINLVSVISGTYLGL 121

Query: 156 KKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLANVL 215
             M +  +  G  G I+N+SS   +           Q             Y  SK   V 
Sbjct: 122 DYMSK--QNGGEGGIIINMSSL--AGLMPVA----QQP-----------VYCASKHGIVG 162

Query: 216 HTKELAQRLKQMEANVTVNCVHPGIVRTRLTRE-REGFITDLVFFLTSKLLKTIPQG 271
            T+  A     M + V +N + PG V T +     +             +   I   
Sbjct: 163 FTRSAALAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKYY 219

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} Length = 301

 Score =  123 bits (311), Expect = 4e-33
 Identities = 48/214 (22%), Positives = 80/214 (37%), Gaps = 27/214 (12%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLS 96
            A++TG  SGIG  TA   A+RGARLVL      A E+A   L     G D   +  D+ 
Sbjct: 33  AAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQ--GFDAHGVVCDVR 90

Query: 97  SLSSVRNFVSQFHSLNLPLNLLINNAG--KFAHQHAISEDGIEMTFATNYLGHFLLTKLL 154
            L  +     +   L   ++++ +NAG         ++ D        +  G     +  
Sbjct: 91  HLDEMVRLADEAFRLLGGVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAF 150

Query: 155 LKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLANV 214
           L +++E     G  G I   +S             +               Y ++K   V
Sbjct: 151 LPRLLE----QGTGGHIAFTAS---------FAGLVPNAGLG--------TYGVAKYGVV 189

Query: 215 LHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRE 248
              + LA+ +K     + V+ + P +V T+L   
Sbjct: 190 GLAETLAREVK--PNGIGVSVLCPMVVETKLVSN 221

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} Length = 319

 Score =  122 bits (309), Expect = 9e-33
 Identities = 43/214 (20%), Positives = 85/214 (39%), Gaps = 22/214 (10%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLS 96
           TA +TG  +G+G    R L  +G ++ +      + ++A A L ++  G +++ + LD++
Sbjct: 10  TAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVA 69

Query: 97  SLSSVRNFVSQFHSLNLPLNLLINNAG--KFAHQHAISEDGIEMTFATNYLGHFLLTKLL 154
           S    +    +  +   P+++L NNAG   F      S D  +     N  G        
Sbjct: 70  SREGFKMAADEVEARFGPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTF 129

Query: 155 LKKMIE-TAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLAN 213
           + +M+E         G +VN +S      +       G              Y  +K A 
Sbjct: 130 VPRMVERVKAGEQKGGHVVNTASM----AAFLAAGSPG-------------IYNTTKFAV 172

Query: 214 VLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTR 247
              ++ L   L   +  + V+ + PG+V++ +  
Sbjct: 173 RGLSESLHYSLL--KYEIGVSVLCPGLVKSYIYA 204

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 Length = 267

 Score =  121 bits (306), Expect = 1e-32
 Identities = 60/229 (26%), Positives = 91/229 (39%), Gaps = 39/229 (17%)

Query: 37  TAIITGATSGIGAETARVLAK---RGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPL 93
           + +ITG   G+G    + L         L    R+ + A+E +  LA +   S+I +L +
Sbjct: 23  SILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELED-LAKN--HSNIHILEI 79

Query: 94  DLSSLSSVRNFVSQFHSL--NLPLNLLINNAG---KFAHQHAISEDGIEMTFATNYLGHF 148
           DL +  +    V+    +  +  LN+L NNAG   K A   A+    +  T  TN +   
Sbjct: 80  DLRNFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPI 139

Query: 149 LLTKLLL------KKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKS--HY 200
           +L K  L       K  E+      +  I+N+SS             LG I  N     Y
Sbjct: 140 MLAKACLPLLKKAAKANESQPMGVGRAAIINMSSI------------LGSIQGNTDGGMY 187

Query: 201 DATRAYALSKLA-NVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRE 248
               AY  SK A N   TK L+  L      +    +HPG V+T +   
Sbjct: 188 ----AYRTSKSALNAA-TKSLSVDLY--PQRIMCVSLHPGWVKTDMGGS 229

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} Length = 264

 Score =  121 bits (305), Expect = 1e-32
 Identities = 42/246 (17%), Positives = 83/246 (33%), Gaps = 42/246 (17%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLS 96
             +I+G    +G   AR  A++GA LVL AR+++  E+   ++     G   + +  D++
Sbjct: 13  VVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDT--GRRALSVGTDIT 70

Query: 97  SLSSVRNFVSQFHSLNLPLNLLINNAG---KFAHQHAISEDGIEMTFATNYLGHFLLTKL 153
             + V + V +       ++++INNA            + + +         G   L + 
Sbjct: 71  DDAQVAHLVDETMKAYGRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQG 130

Query: 154 LLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQI-SRNKSHYDATRA--YALSK 210
               + E+       G +VNV+S             + +        Y   ++   A+S+
Sbjct: 131 FTPALEESK------GAVVNVNSM------------VVRHSQAKYGAYKMAKSALLAMSQ 172

Query: 211 -LANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSK----LL 265
            LA      EL ++       + VN V PG +     +                      
Sbjct: 173 TLA-----TELGEK------GIRVNSVLPGYIWGGTLKSYFEHQAGKYGTSVEDIYNAAA 221

Query: 266 KTIPQG 271
                 
Sbjct: 222 AGSDLK 227

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} Length = 279

 Score =  120 bits (304), Expect = 2e-32
 Identities = 67/277 (24%), Positives = 101/277 (36%), Gaps = 54/277 (19%)

Query: 13  GASGYGSKSTAEQVTDGCPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAA 72
           G+S +    ++  V  G       TA +TG +SGIG   AR LA RG  +   AR  K  
Sbjct: 2   GSSHHHHHHSSGLVPRGSHMSRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNV 61

Query: 73  EEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAIS 132
             A   L +   G D+     D++S   V   V+       P+ +L+N+AG        +
Sbjct: 62  SAAVDGLRAA--GHDVDGSSCDVTSTDEVHAAVAAAVERFGPIGILVNSAG-------RN 112

Query: 133 EDGIEMTF---------ATNYLGHFLLTKLLLK--KMIETAKATGIQGRIVNVSSSIHSW 181
             G               TN  G F +T+ +L+   M E        GRIVN++S+    
Sbjct: 113 GGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAGW-----GRIVNIAST--GG 165

Query: 182 FSGDMIRYLGQISRNKSHYDATRA--YALSK-LANVLHTKELAQRLKQMEANVTVNCVHP 238
             G     +       + Y A++      +K +       ELA+        +TVN V P
Sbjct: 166 KQG----VMYA-----APYTASKHGVVGFTKSVG-----FELAKT------GITVNAVCP 205

Query: 239 GIVRTRLTREREGFITDLVFFLT----SKLLKTIPQG 271
           G V T +                     +    IP G
Sbjct: 206 GYVETPMAERVREGYARHWGVTEQEVHERFNAKIPLG 242

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A Length = 251

 Score =  119 bits (301), Expect = 3e-32
 Identities = 54/214 (25%), Positives = 81/214 (37%), Gaps = 26/214 (12%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLS 96
            AIITG T GIG   A    + GA++++  R     E+A   + +      I     D S
Sbjct: 8   VAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGT---PDQIQFFQHDSS 64

Query: 97  SLSSVRNFVSQFHSLNLPLNLLINNAG--KFAHQHAISEDGIEMTFATNYLGHFLLTKLL 154
                            P++ L+NNAG          +        A N  G F  T+L 
Sbjct: 65  DEDGWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLG 124

Query: 155 LKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLANV 214
           +++M    K  G+   I+N+SS              G +           AY  SK A  
Sbjct: 125 IQRM----KNKGLGASIINMSS------------IEGFVGDPSLG-----AYNASKGAVR 163

Query: 215 LHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRE 248
           + +K  A      + +V VN VHPG ++T L  +
Sbjct: 164 IMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDD 197

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 Length = 303

 Score =  120 bits (304), Expect = 4e-32
 Identities = 57/243 (23%), Positives = 93/243 (38%), Gaps = 39/243 (16%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCP---GSDIVVLPL 93
            AI+TG  +GIG    + L + G+ +V+ +R L+  + A   L ++ P    + ++ +  
Sbjct: 20  VAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQC 79

Query: 94  DLSSLSSVRNFVSQFHSLNLPLNLLINNAG--KFAHQHAISEDGIEMTFATNYLGHFLLT 151
           ++ +   V N V         +N L+NN G    +    IS  G      TN  G F + 
Sbjct: 80  NIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMC 139

Query: 152 KLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRA--YALS 209
           K +    ++        G IVN+     + F                H  A RA  Y L+
Sbjct: 140 KAVYSSWMKEHG-----GSIVNIIVPTKAGFPL------------AVHSGAARAGVYNLT 182

Query: 210 K-LANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSKLLKTI 268
           K LA      E A         + +NCV PG++ ++   E  G      F       + I
Sbjct: 183 KSLA-----LEWACS------GIRINCVAPGVIYSQTAVENYGSWGQSFF---EGSFQKI 228

Query: 269 PQG 271
           P  
Sbjct: 229 PAK 231

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} Length = 254

 Score =  119 bits (300), Expect = 4e-32
 Identities = 46/218 (21%), Positives = 81/218 (37%), Gaps = 39/218 (17%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVL--PARSLKAAEEAKARLASDCPGSDIVVLPLD 94
             ++TG + GIG     VL       V+   ARS    ++ K +      G     +  D
Sbjct: 4   VILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKY-----GDRFFYVVGD 58

Query: 95  LSSLSSVRNFVSQFHSLNLPLNLLINNAG---KFAHQHAISEDGIEMTFATNYLGHFLLT 151
           ++  S ++  V+     +  ++ L+ NAG      + + I  +  +  +  N+     L 
Sbjct: 59  ITEDSVLKQLVNAAVKGHGKIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLV 118

Query: 152 KLLLKKMIETAKATGIQGRIVNVSSSI-HSWFSGDMIRYLGQISRNKSHYDATRAYALSK 210
            + L ++ +T       G +V VSS   + +FS                Y +++A AL+ 
Sbjct: 119 GIALPELKKT------NGNVVFVSSDACNMYFSS------------WGAYGSSKA-ALNH 159

Query: 211 LANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRE 248
                    LA      E  V    V PGIV T +   
Sbjct: 160 F-----AMTLANE----ERQVKAIAVAPGIVDTDMQVN 188

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* Length = 260

 Score =  119 bits (301), Expect = 5e-32
 Identities = 49/214 (22%), Positives = 93/214 (43%), Gaps = 29/214 (13%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLS 96
            A++T +T GIG   AR LA+ GA +V+ +R  +  +   A L  +  G  +      + 
Sbjct: 16  VALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGE--GLSVTGTVCHVG 73

Query: 97  SLSSVRNFVSQFHSLNLPLNLLINNAG---KFAHQHAISEDGIEMTFATNYLGHFLLTKL 153
                   V+   +L+  +++L++NA     F +    +E+  +     N     L+TK 
Sbjct: 74  KAEDRERLVAMAVNLHGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKA 133

Query: 154 LLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLAN 213
           ++ +M +        G ++ V SS+ ++     +                  Y +SK A 
Sbjct: 134 VVPEMEKRGG-----GSVLIV-SSVGAYHPFPNL----------------GPYNVSKTAL 171

Query: 214 VLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTR 247
           +  TK LA  L     N+ VNC+ PG+++T  ++
Sbjct: 172 LGLTKNLAVELAPR--NIRVNCLAPGLIKTNFSQ 203

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} Length = 263

 Score =  119 bits (300), Expect = 7e-32
 Identities = 60/257 (23%), Positives = 107/257 (41%), Gaps = 56/257 (21%)

Query: 32  NLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVL 91
           +LS   AI+TG + GIGA  AR L K GA + +    + AA+   A L      +    +
Sbjct: 9   DLSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGL-----ENGGFAV 63

Query: 92  PLDLSSLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAISEDG--IEMT-------FAT 142
            +D++  +SV   + +        +LL  NAG       +S     +++T       F  
Sbjct: 64  EVDVTKRASVDAAMQKAIDALGGFDLLCANAG-------VSTMRPAVDITDEEWDFNFDV 116

Query: 143 NYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQI-SRNKSHYD 201
           N  G FL  ++  +  +    A+  +G IVN +S               ++ +   +HY 
Sbjct: 117 NARGVFLANQIACRHFL----ASNTKGVIVNTASLA------------AKVGAPLLAHYS 160

Query: 202 ATRA--YALSK-LANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVF 258
           A++   +  ++ LA     +E+A +      N+ VNCV PG V+T +      +  +L  
Sbjct: 161 ASKFAVFGWTQALA-----REMAPK------NIRVNCVCPGFVKTAMQEREIIWEAELRG 209

Query: 259 FLT----SKLLKTIPQG 271
                  ++ +   P G
Sbjct: 210 MTPEAVRAEYVSLTPLG 226

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 Length = 246

 Score =  118 bits (298), Expect = 8e-32
 Identities = 54/238 (22%), Positives = 89/238 (37%), Gaps = 39/238 (16%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLS 96
             I+T A  GIG   A   A+ GA+++    +    +E +           I    LD++
Sbjct: 8   VIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPG-------IQTRVLDVT 60

Query: 97  SLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQ---HAISEDGIEMTFATNYLGHFLLTKL 153
               +  F ++       L++L N AG F H        E   + +   N    +L+ K 
Sbjct: 61  KKKQIDQFANEVE----RLDVLFNVAG-FVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKA 115

Query: 154 LLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLAN 213
            L KM+         G I+N+ SS+ S   G     + +             Y+ +K A 
Sbjct: 116 FLPKMLAQKS-----GNIINM-SSVASSVKGV----VNRC-----------VYSTTKAAV 154

Query: 214 VLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSKLLKTIPQG 271
           +  TK +A     ++  +  NCV PG V T   +ER     +      +  LK    G
Sbjct: 155 IGLTKSVAADF--IQQGIRCNCVCPGTVDTPSLQERIQARGNPEEAR-NDFLKRQKTG 209

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} Length = 207

 Score =  116 bits (294), Expect = 1e-31
 Identities = 48/214 (22%), Positives = 68/214 (31%), Gaps = 45/214 (21%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLS 96
             +ITGAT G+G   AR L   G  L+L  R       A A LA +        LP DL+
Sbjct: 2   RVLITGATGGLGGAFARALK--GHDLLLSGRR----AGALAELAREVGA---RALPADLA 52

Query: 97  SLSSVRNFVSQFHSLNLPLNLLINNAG--KFAHQHAISEDGIEMTFATNYLGHFLLTKLL 154
                +  + +      PL+LL++  G    A       D +E   A + L        +
Sbjct: 53  DELEAKALLEEAG----PLDLLVHAVGKAGRASVREAGRDLVEEMLAAHLLT----AAFV 104

Query: 155 LKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQI-SRNKSHYDATRAYALSKLAN 213
           LK             R V   +                +     + Y A +  AL     
Sbjct: 105 LKHARFQK-----GARAVFFGAY------------PRYVQVPGFAAYAAAKG-ALEAYLE 146

Query: 214 VLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTR 247
               KEL +        V +  V    V T L  
Sbjct: 147 AAR-KELLRE------GVHLVLVRLPAVATGLWA 173

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} Length = 235

 Score =  117 bits (296), Expect = 1e-31
 Identities = 50/215 (23%), Positives = 77/215 (35%), Gaps = 30/215 (13%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLS 96
            A+ITGA+ GIG   AR LA+ G  L L ARS+   E+    L  +  G ++    LD+S
Sbjct: 4   VAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQ-GVEVFYHHLDVS 62

Query: 97  SLSSVRNFVSQFHSLNLPLNLLINNAG--KFAHQHAISEDGIEMTFATNYLGHFLLTKLL 154
              SV  F  +       +++++ NAG   F     +SE+        N LG +   K  
Sbjct: 63  KAESVEEFSKKVLERFGDVDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAF 122

Query: 155 LKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLANV 214
           L  +  T         +V  S                              Y  +K A  
Sbjct: 123 LDSLKRTGG-----LALVTTSDVSARLIPY------------------GGGYVSTKWA-- 157

Query: 215 LHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRER 249
              + L +  +    +V    + PG V T     +
Sbjct: 158 --ARALVRTFQIENPDVRFFELRPGAVDTYFGGSK 190

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A Length = 255

 Score =  118 bits (297), Expect = 2e-31
 Identities = 57/237 (24%), Positives = 85/237 (35%), Gaps = 34/237 (14%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLS 96
            AI+ G T G+G  T R L + GA ++L  R+       +        G  +  L  D++
Sbjct: 10  KAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEF-----GPRVHALRSDIA 64

Query: 97  SLSSVRNFVSQFHSLNLPLNLLINNAG--KFAHQHAISEDGIEMTFATNYLGHFLLTKLL 154
            L+ +    +        ++LL  NAG  +      +SE   +  FA N  G F   + L
Sbjct: 65  DLNEIAVLGAAAGQTLGAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRL 124

Query: 155 LKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLANV 214
              + E        G IV  SS      + +     G      S Y A++A AL   A+V
Sbjct: 125 TPLIRE-------GGSIVFTSS-----VADEGGHP-GM-----SVYSASKA-ALVSFASV 165

Query: 215 LHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSKLLKTIPQG 271
           L   EL  R       + VN V PG + T       G          +      P  
Sbjct: 166 L-AAELLPR------GIRVNSVSPGFIDTPTK-GVAGITEAERAEFKTLGDNITPMK 214

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} Length = 277

 Score =  118 bits (298), Expect = 2e-31
 Identities = 57/259 (22%), Positives = 95/259 (36%), Gaps = 39/259 (15%)

Query: 19  SKSTAEQVTDGCPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKAR 78
              T    +   P+L+   AI+TGA +GIG   AR LA  G  ++       AA+ A  +
Sbjct: 13  EAQTQGPGSMNHPDLAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATK 72

Query: 79  LASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLPLNLLINNAG--KFAHQHAISEDGI 136
           +     G       +D+S    +   V    +    ++ L+ NAG    A     + +  
Sbjct: 73  I-----GCGAAACRVDVSDEQQIIAMVDACVAAFGGVDKLVANAGVVHLASLIDTTVEDF 127

Query: 137 EMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRN 196
           +   A N  G +L TK    +MIE        G IVN+SS              GQ++  
Sbjct: 128 DRVIAINLRGAWLCTKHAAPRMIERGG-----GAIVNLSS------------LAGQVAVG 170

Query: 197 KSHYDATRAYALSKLANVLHTK----ELAQRLKQMEANVTVNCVHPGIVRTRLTREREGF 252
            +      AY +SK   +  ++    EL          +  N + P  V T + +     
Sbjct: 171 GTG-----AYGMSKAGIIQLSRITAAELRSS------GIRSNTLLPAFVDTPMQQTAMAM 219

Query: 253 ITDLVFFLTSKLLKTIPQG 271
               +    ++ +    QG
Sbjct: 220 FDGALGAGGARSMIARLQG 238

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 Length = 273

 Score =  117 bits (296), Expect = 3e-31
 Identities = 54/244 (22%), Positives = 89/244 (36%), Gaps = 42/244 (17%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLS 96
           TA++TG + GIG      LA  GAR+   +R+ K  +E          G ++     DL 
Sbjct: 23  TALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREK--GLNVEGSVCDLL 80

Query: 97  SLSSVRNFVSQFHS-LNLPLNLLINNAG--KFAHQHAISEDGIEMTFATNYLGHFLLTKL 153
           S +     +       +  LN+L+NNAG          +E    +   TN+   + L+++
Sbjct: 81  SRTERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQI 140

Query: 154 LLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLAN 213
               +  +       G ++ +SS         +  +    S +         Y+ SK A 
Sbjct: 141 AYPLLKASQN-----GNVIFLSS---------IAGFSALPSVS--------LYSASKGAI 178

Query: 214 VLHTK----ELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFF--LTSKLLKT 267
              TK    E A+       N+ VN V PG++ T L    E  I             +  
Sbjct: 179 NQMTKSLACEWAKD------NIRVNSVAPGVILTPLV---ETAIKKNPHQKEEIDNFIVK 229

Query: 268 IPQG 271
            P G
Sbjct: 230 TPMG 233

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} Length = 257

 Score =  116 bits (294), Expect = 4e-31
 Identities = 57/240 (23%), Positives = 104/240 (43%), Gaps = 36/240 (15%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLS 96
             IITG +SG+G   A   AK GAR+V+  R+ +  EEAK  +        I+ + +D+ 
Sbjct: 8   VVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQF--PGQILTVQMDVR 65

Query: 97  SLSSVRNFVSQFHSLNLPLNLLINNAG--KFAHQHAISEDGIEMTFATNYLGHFLLTKLL 154
           +   ++  + Q       +++LINNA          +S +G          G F  ++ +
Sbjct: 66  NTDDIQKMIEQIDEKFGRIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAI 125

Query: 155 LKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRA--YALSK-L 211
            K  IE     GI+G I+N+  + ++W +G      G I     H  A +A   A++K L
Sbjct: 126 GKYWIE----KGIKGNIINM-VATYAWDAG-----PGVI-----HSAAAKAGVLAMTKTL 170

Query: 212 ANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSKLLKTIPQG 271
           A      E  ++       + VN + PG +      ++     ++      + ++++P G
Sbjct: 171 A-----VEWGRK-----YGIRVNAIAPGPIERTGGADKLWISEEMA----KRTIQSVPLG 216

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} Length = 260

 Score =  116 bits (294), Expect = 4e-31
 Identities = 47/265 (17%), Positives = 86/265 (32%), Gaps = 44/265 (16%)

Query: 9   LGSAGASGYGSKSTAEQVTDGCPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPAR- 67
           +GS+    + S         G   LSS   +ITGA+  +G   A  L + G R+++  R 
Sbjct: 1   MGSSHHHHHHSSGRENLYFQGHMTLSSAPILITGASQRVGLHCALRLLEHGHRVIISYRT 60

Query: 68  SLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLPLNLLINNAGKFAH 127
              +  E +   A        V L  D S  + +  F+    +    L  +++NA ++  
Sbjct: 61  EHASVTELRQAGA--------VALYGDFSCETGIMAFIDLLKTQTSSLRAVVHNASEWLA 112

Query: 128 Q-HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDM 186
           +      D     F+ + L  +L+       +  +         IV++ S   +      
Sbjct: 113 ETPGEEADNFTRMFSVHMLAPYLINLHCEPLLTASE-----VADIVHI-SDDVTRKG--- 163

Query: 187 IRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLT 246
                    +  H     AY  +K      T   A R       V VN + P ++  +  
Sbjct: 164 ---------SSKHI----AYCATKAGLESLTLSFAARFA---PLVKVNGIAPALLMFQPK 207

Query: 247 REREGFITDLVFFLTSKLLKTIPQG 271
            +             +  L     G
Sbjct: 208 DDAAYR---------ANALAKSALG 223

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} Length = 280

 Score =  117 bits (296), Expect = 4e-31
 Identities = 55/220 (25%), Positives = 80/220 (36%), Gaps = 36/220 (16%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLS 96
            AI+TGA+SGIG   A + A+ GA++V+ AR+  A  E    +A    G +   L  D+ 
Sbjct: 10  IAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGG--GGEAAALAGDVG 67

Query: 97  SLSSVRNFV----SQFHSLNLPLNLLINNAG---KFAHQHAISEDGIEMTFATNYLGHFL 149
             +     V     +F      L+   NNAG         ++S +G   T  TN    FL
Sbjct: 68  DEALHEALVELAVRRFGG----LDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFL 123

Query: 150 LTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALS 209
             K  +  +          G +   SS     F G    + G              YA S
Sbjct: 124 AAKYQVPAIAALGG-----GSLTFTSS-----FVGHTAGFAGVA-----------PYAAS 162

Query: 210 KLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRER 249
           K   +   + LA  L      + VN + PG   T      
Sbjct: 163 KAGLIGLVQALAVELGA--RGIRVNALLPGGTDTPANFAN 200

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} Length = 262

 Score =  116 bits (294), Expect = 5e-31
 Identities = 56/229 (24%), Positives = 86/229 (37%), Gaps = 46/229 (20%)

Query: 32  NLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVL 91
           +L   + ++TG T GIG   A V A+ GA + +  RS    +   A L        ++ +
Sbjct: 7   DLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQL-GSGKVIGV 65

Query: 92  PLDLSSLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAISEDG--IEMT-------FAT 142
             D+S  +       +       ++++  NAG       +  D     MT       FA 
Sbjct: 66  QTDVSDRAQCDALAGRAVEEFGGIDVVCANAG-------VFPDAPLATMTPEQLNGIFAV 118

Query: 143 NYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDA 202
           N  G F   +  L  +I +       GR+V  SS      +G +  Y G      SHY A
Sbjct: 119 NVNGTFYAVQACLDALIASGS-----GRVVLTSS-----ITGPITGYPGW-----SHYGA 163

Query: 203 TRA--YALSK-LANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRE 248
           T+A      +  A      ELA         +TVN + PG + T    E
Sbjct: 164 TKAAQLGFMRTAA-----IELAPH------KITVNAIMPGNIMTEGLLE 201

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} Length = 260

 Score =  116 bits (293), Expect = 6e-31
 Identities = 51/222 (22%), Positives = 79/222 (35%), Gaps = 37/222 (16%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLS 96
             ++TGA+ GIG   A  L K GA + +  R L           S   G   V +  D S
Sbjct: 7   VCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSL--GGQCVPVVCDSS 64

Query: 97  SLSSVRNFVSQFHSLNL-PLNLLINNAGKFAHQHAISEDG--IEMT-------FATNYLG 146
             S VR+   Q        L++L+NNA         + +    E               G
Sbjct: 65  QESEVRSLFEQVDREQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRG 124

Query: 147 HFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAY 206
           H+  +    + M+        QG IV +SS          ++Y+  +            Y
Sbjct: 125 HYFCSVYGARLMVPAG-----QGLIVVISS-----PGS--LQYMFNV-----------PY 161

Query: 207 ALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRE 248
            + K A      + A  L+     V+   + PGIV+T L +E
Sbjct: 162 GVGKAACDKLAADCAHELR--RHGVSCVSLWPGIVQTELLKE 201

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} Length = 262

 Score =  116 bits (293), Expect = 7e-31
 Identities = 58/223 (26%), Positives = 90/223 (40%), Gaps = 35/223 (15%)

Query: 32  NLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVL 91
           +LS   A++TGA+ GIGA  AR L   GAR+VL AR ++     +  + +   G +    
Sbjct: 26  SLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAA--GGEAESH 83

Query: 92  PLDLSSLSSVRNFVSQFHSLNLPLNLLINNAG---KFAHQHAISEDGIEMTFATNYLGHF 148
             DLS   ++  F +   + +   ++L+NNAG        H +     +   A N    +
Sbjct: 84  ACDLSHSDAIAAFATGVLAAHGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPY 143

Query: 149 LLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRA--Y 206
           LL +     MI   +     G I+N+SS      +G             + Y A++    
Sbjct: 144 LLLRAFAPAMIAAKR-----GHIINISSL-----AGKNPVA-DG-----AAYTASKWGLN 187

Query: 207 ALSK-LANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRE 248
            L    A     +EL Q        V V+ V PG VRT     
Sbjct: 188 GLMTSAA-----EELRQH------QVRVSLVAPGSVRTEFGVG 219

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} Length = 261

 Score =  116 bits (293), Expect = 8e-31
 Identities = 60/238 (25%), Positives = 92/238 (38%), Gaps = 31/238 (13%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLS 96
            A+ITGA SG G   A+  AK GA++V+  R    AE     +     G   + +  D+S
Sbjct: 11  VALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEI-----GDAALAVAADIS 65

Query: 97  SLSSVRNFVSQFHSLNLPLNLLINNAG---KFAHQHAISEDGIEMTFATNYLGHFLLTKL 153
             + V   V    S    +++L+NNAG   K  +   +  +  +     N  G +L+T  
Sbjct: 66  KEADVDAAVEAALSKFGKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSK 125

Query: 154 LLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLAN 213
           L+    E   A G +  I+NV+S           R                 Y  +K   
Sbjct: 126 LIPHFKE-NGAKGQECVILNVAS-----TGAGRPRP-NLA-----------WYNATKGWV 167

Query: 214 VLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSKLLKTIPQG 271
           V  TK LA  L    A + V  ++P    T L     G  ++ +     K   +IP G
Sbjct: 168 VSVTKALAIELAP--AKIRVVALNPVAGETPLLTTFMGEDSEEI---RKKFRDSIPMG 220

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* Length = 255

 Score =  116 bits (292), Expect = 1e-30
 Identities = 52/247 (21%), Positives = 88/247 (35%), Gaps = 55/247 (22%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLS 96
            AIITGA +GIG E A   A  GA +V+   +  AA      +     G        D++
Sbjct: 13  CAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQL--GGQAFACRCDIT 70

Query: 97  SLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAISEDG-IEMT-------FATNYLGHF 148
           S   +        S    +++L+NNAG              +M        +  N    F
Sbjct: 71  SEQELSALADFAISKLGKVDILVNNAG-------GGGPKPFDMPMADFRRAYELNVFSFF 123

Query: 149 LLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYAL 208
            L++L+  +M +        G I+ ++S      + +                   +YA 
Sbjct: 124 HLSQLVAPEMEKNGG-----GVILTITSM-----AAENKNI-NMT-----------SYAS 161

Query: 209 SKLANVLHTK----ELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSKL 264
           SK A     +    +L ++      N+ VN + PG + T   +     IT  +     K+
Sbjct: 162 SKAAASHLVRNMAFDLGEK------NIRVNGIAPGAILTDALKS---VITPEI---EQKM 209

Query: 265 LKTIPQG 271
           L+  P  
Sbjct: 210 LQHTPIR 216

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} Length = 283

 Score =  116 bits (293), Expect = 1e-30
 Identities = 58/240 (24%), Positives = 87/240 (36%), Gaps = 35/240 (14%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLS 96
            A+ITGA SGIG  TA  LA  G  +    R+    EE    +     G   + L  D+S
Sbjct: 30  VALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGA--GGQAIALEADVS 87

Query: 97  SLSSVRNFVSQFHSLNLPLNLLINNAG---KFAHQHAISEDGIEMTFATNYLGHFLLTKL 153
               +RN V         L++++ NAG    +A    +     + T A N  G FL   L
Sbjct: 88  DELQMRNAVRDLVLKFGHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHL 147

Query: 154 LLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLAN 213
            +  + +        G IV VSS      +G   R                AY  +K A 
Sbjct: 148 TVPYLKQRGG-----GAIVVVSS-----ING--TRTFTTPGAT--------AYTATKAAQ 187

Query: 214 VLHTK----ELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSKLLKTIP 269
           V   +    EL +       ++ VN V PG + T ++   +    +            +P
Sbjct: 188 VAIVQQLALELGKH------HIRVNAVCPGAIETNISDNTKLRHEEETAIPVEWPKGQVP 241

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* Length = 254

 Score =  115 bits (291), Expect = 1e-30
 Identities = 54/218 (24%), Positives = 77/218 (35%), Gaps = 39/218 (17%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLS 96
           T IITG   G+GAE AR     GAR+VL     +        L     G       LD++
Sbjct: 7   TVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL-----GDAARYQHLDVT 61

Query: 97  SLSSVRNFVSQFHSLNLPLNLLINNAG--KFAHQHAISEDGIEMTFATNYLGHFLLTKLL 154
                +  V+        ++ L+NNAG          S +        N  G F+  K +
Sbjct: 62  IEEDWQRVVAYAREEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTV 121

Query: 155 LKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLANV 214
           +  M +        G IVN+SS              G +    +      +Y  SK    
Sbjct: 122 IPAMKDAGG-----GSIVNISS------------AAGLMGLALTS-----SYGASKWGVR 159

Query: 215 LHTK----ELAQRLKQMEANVTVNCVHPGIVRTRLTRE 248
             +K    EL          + VN VHPG+  T +T E
Sbjct: 160 GLSKLAAVELGTD------RIRVNSVHPGMTYTPMTAE 191

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} Length = 272

 Score =  116 bits (292), Expect = 1e-30
 Identities = 53/220 (24%), Positives = 82/220 (37%), Gaps = 30/220 (13%)

Query: 32  NLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVL 91
                 AI+TGA SG+G   A  LA  G  + L  R L A +E  A +     G D + +
Sbjct: 25  KTGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEI-----GDDALCV 79

Query: 92  PLDLSSLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQ---HAISEDGIEMTFATNYLGHF 148
           P D++   SVR   +        +++L NNAG  A       ++    +    TN  G F
Sbjct: 80  PTDVTDPDSVRALFTATVEKFGRVDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPF 139

Query: 149 LLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYAL 208
           L T+   + M    +  G  GRI+N  S                  R  S       Y  
Sbjct: 140 LCTQEAFRVMKA-QEPRG--GRIINNGS------------ISATSPRPYSA-----PYTA 179

Query: 209 SKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRE 248
           +K A    TK  +   +    ++    +  G   T + ++
Sbjct: 180 TKHAITGLTKSTSLDGRV--HDIACGQIDIGNADTPMAQK 217

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* Length = 277

 Score =  116 bits (292), Expect = 1e-30
 Identities = 68/258 (26%), Positives = 102/258 (39%), Gaps = 54/258 (20%)

Query: 32  NLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVL 91
              S  A++TGATSGIG E AR L K G R+ + AR  +        L     G +    
Sbjct: 19  TQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREA--GVEADGR 76

Query: 92  PLDLSSLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAISEDG--IEMT-------FAT 142
             D+ S+  +   V+       P+++L+NNAG           G   E+          T
Sbjct: 77  TCDVRSVPEIEALVAAVVERYGPVDVLVNNAG-------RPGGGATAELADELWLDVVET 129

Query: 143 NYLGHFLLTKLLLK--KMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHY 200
           N  G F +TK +LK   M+E        GRIVN++S+      G     +       + Y
Sbjct: 130 NLTGVFRVTKQVLKAGGMLERGT-----GRIVNIAST--GGKQG----VVHA-----APY 173

Query: 201 DATRA--YALSK-LANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLV 257
            A++      +K L       ELA+        +TVN V PG V T +        +D+ 
Sbjct: 174 SASKHGVVGFTKALG-----LELART------GITVNAVCPGFVETPMAASVREHYSDIW 222

Query: 258 FFLT----SKLLKTIPQG 271
              T     ++   +P G
Sbjct: 223 EVSTEEAFDRITARVPIG 240

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 Length = 270

 Score =  116 bits (292), Expect = 1e-30
 Identities = 58/242 (23%), Positives = 90/242 (37%), Gaps = 43/242 (17%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLS 96
             ++TG   GIGA   R     GAR+V+  +        +  L         V +  D++
Sbjct: 11  VVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELP------GAVFILCDVT 64

Query: 97  SLSSVRNFVSQ----FHSLNLPLNLLINNAG---KFAHQHAISEDGIEMTFATNYLGHFL 149
               V+  VS+    F      L+ ++NNAG           S  G       N LG + 
Sbjct: 65  QEDDVKTLVSETIRRFGR----LDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYT 120

Query: 150 LTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALS 209
           LTKL L  +    + +   G ++N+SS             +G I + ++       Y  +
Sbjct: 121 LTKLALPYL----RKSQ--GNVINISS------------LVGAIGQAQAV-----PYVAT 157

Query: 210 KLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSKLLKTIP 269
           K A    TK LA         V VNC+ PG + T L  E    + D    +  + +   P
Sbjct: 158 KGAVTAMTKALALDESPY--GVRVNCISPGNIWTPLWEELAALMPDPRASI-REGMLAQP 214

Query: 270 QG 271
            G
Sbjct: 215 LG 216

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* Length = 254

 Score =  115 bits (291), Expect = 1e-30
 Identities = 61/243 (25%), Positives = 95/243 (39%), Gaps = 46/243 (18%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLS 96
            A +TGA SGIG E  R  A  GARL+L  R   A + A   L      +    +  D++
Sbjct: 13  CAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELG----AAVAARIVADVT 68

Query: 97  SLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAI--SEDGIEMTFATNYLGHFLLTKLL 154
              ++    ++  ++  P+++L+N+AG      A+   +       A N  G F  ++  
Sbjct: 69  DAEAMTAAAAEAEAVA-PVSILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAF 127

Query: 155 LKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRA--YALSK-L 211
            + M+         G IVN+ S         M   +    +  S Y A++   + L++ L
Sbjct: 128 GRAMVARGA-----GAIVNLGS---------MSGTIVNRPQFASSYMASKGAVHQLTRAL 173

Query: 212 ANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLT---REREGFITDLVFFLTSKLLKTI 268
           A      E A R       V VN + PG V T +T   RER               L   
Sbjct: 174 AA-----EWAGR------GVRVNALAPGYVATEMTLKMRERPEL--------FETWLDMT 214

Query: 269 PQG 271
           P G
Sbjct: 215 PMG 217

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* Length = 260

 Score =  115 bits (291), Expect = 1e-30
 Identities = 64/250 (25%), Positives = 92/250 (36%), Gaps = 39/250 (15%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLS 96
            A++TG+TSGIG   A  LA +GA +VL      A  E      +   G  ++    DLS
Sbjct: 6   VAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLS 65

Query: 97  SLSSVRNFVSQFHSLNLPLNLLINNAG--KFAHQHAISEDGIEMTFATNYLGHFLLTKLL 154
              +VR  V         +++L+NNAG    A       +  +   A N    F  T   
Sbjct: 66  KGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAA 125

Query: 155 LKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRA--YALSKLA 212
           L  M +        GRI+N+ +S H              S NKS Y A +      +K+ 
Sbjct: 126 LPHMKKQGF-----GRIINI-ASAHG-LVA---------SANKSAYVAAKHGVVGFTKVT 169

Query: 213 NVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTR-------EREGFITDLVFFLTSKLL 265
                 E A +       +T N + PG VRT L         E+ G   +        L 
Sbjct: 170 ----ALETAGQ------GITANAICPGWVRTPLVEKQISALAEKNGVDQETA--ARELLS 217

Query: 266 KTIPQGAATT 275
           +  P     T
Sbjct: 218 EKQPSLQFVT 227

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* Length = 260

 Score =  115 bits (291), Expect = 1e-30
 Identities = 56/248 (22%), Positives = 94/248 (37%), Gaps = 41/248 (16%)

Query: 32  NLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVL 91
           NL   TA++TG + GIG      LA  GA +   +R+ K   +   +  S   G  +   
Sbjct: 6   NLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSK--GFKVEAS 63

Query: 92  PLDLSSLSSVRNFVSQFHS-LNLPLNLLINNAG--KFAHQHAISEDGIEMTFATNYLGHF 148
             DLSS S  +  ++   +  +  LN+L+NNAG   +      + +   +  + N+   +
Sbjct: 64  VCDLSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAY 123

Query: 149 LLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYAL 208
            L+ L    +  + +     G +V +SS         +   L               Y  
Sbjct: 124 HLSVLAHPFLKASER-----GNVVFISS---------VSGALAVPYEA--------VYGA 161

Query: 209 SKLANVLHTK----ELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFF-LTSK 263
           +K A    T+    E A+       N+ VN V PG++ T L    E  I D       +K
Sbjct: 162 TKGAMDQLTRCLAFEWAKD------NIRVNGVGPGVIATSLV---EMTIQDPEQKENLNK 212

Query: 264 LLKTIPQG 271
           L+      
Sbjct: 213 LIDRCALR 220

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 Length = 267

 Score =  115 bits (291), Expect = 1e-30
 Identities = 54/247 (21%), Positives = 92/247 (37%), Gaps = 44/247 (17%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLS 96
             +ITG  SG+G  TA  LA  GA+L L   S +  E +KA +    P ++++    D+S
Sbjct: 15  VVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVS 74

Query: 97  SLSSVRNFV----SQFHSLNLPLNLLINNAG---KFAHQHAISEDGIEMTFATNYLGHFL 149
             + V  +V     +F      ++   NNAG   K     + +    +   + N  G FL
Sbjct: 75  DEAQVEAYVTATTERFGR----IDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFL 130

Query: 150 LTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALS 209
             + +LK M E        G +VN +S       G +     Q             YA +
Sbjct: 131 GLEKVLKIMREQGS-----GMVVNTAS-----VGG-IRGIGNQS-----------GYAAA 168

Query: 210 KLANVLHTK----ELAQRLKQMEANVTVNCVHPGIVRTRLTRE-REGFITDLVFFLTSKL 264
           K   V  T+    E  +        + +N + PG + T +     +    +       + 
Sbjct: 169 KHGVVGLTRNSAVEYGRY------GIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEF 222

Query: 265 LKTIPQG 271
           ++  P  
Sbjct: 223 IQVNPSK 229

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} Length = 247

 Score =  114 bits (289), Expect = 2e-30
 Identities = 52/217 (23%), Positives = 85/217 (39%), Gaps = 29/217 (13%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARL-ASDCPGSDIVVLPLDL 95
             ++TGA  GIGA  AR  A  GA +VL  R+  +  E   ++ ++  P   I+ L L+ 
Sbjct: 16  VILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLEN 75

Query: 96  SSLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQ---HAISEDGIEMTFATNYLGHFLLTK 152
           ++    R   ++       L+ L++NA     +     + ++        N    F+LT+
Sbjct: 76  ATAQQYRELAARVEHEFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTR 135

Query: 153 LLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIR-YLGQISRNKSHYDATRAYALSKL 211
            LL  +  +         I   SSS      G   R   G             AY +SK 
Sbjct: 136 ALLPLLKRSED-----ASIAFTSSS-----VGRKGRANWG-------------AYGVSKF 172

Query: 212 ANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRE 248
           A     + LA  L +    V  N ++PG  RT +  +
Sbjct: 173 ATEGLMQTLADEL-EGVTAVRANSINPGATRTGMRAQ 208

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} Length = 276

 Score =  115 bits (291), Expect = 2e-30
 Identities = 62/243 (25%), Positives = 100/243 (41%), Gaps = 31/243 (12%)

Query: 32  NLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVL 91
           +L+   A++TG + GIG   A+ L + GAR+ + AR  +A  +   RL++     D   +
Sbjct: 26  SLAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSA---YGDCQAI 82

Query: 92  PLDLSSLSSVRNFVSQFHSLNLPLNLLINNAG--KFAHQHAISEDGIEMTFATNYLGHFL 149
           P DLSS +  R        L+  L++L+NNAG    A   +    G E     N    F 
Sbjct: 83  PADLSSEAGARRLAQALGELSARLDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFS 142

Query: 150 LTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALS 209
             + LL  +  +A A     R++N+  S+    S    +                AY  S
Sbjct: 143 CIQQLLPLLRRSASAEN-PARVINI-GSVAG-ISAMGEQ--------------AYAYGPS 185

Query: 210 KLANVLH-TKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSKLLKTI 268
           K A +   ++ LA+ L     ++ VN + PG   +R+T        D           +I
Sbjct: 186 K-AALHQLSRMLAKELVGE--HINVNVIAPGRFPSRMT---RHIANDPQA--LEADSASI 237

Query: 269 PQG 271
           P G
Sbjct: 238 PMG 240

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} Length = 281

 Score =  115 bits (291), Expect = 2e-30
 Identities = 46/219 (21%), Positives = 78/219 (35%), Gaps = 34/219 (15%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLS 96
            A++TG  +G+G   A+ L+  G  +V+  R     + A   +     G+ +  +  D+ 
Sbjct: 35  IALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGR-TGNIVRAVVCDVG 93

Query: 97  SLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAI---SEDGIEMTFATNYLGHFLLTKL 153
               V    +   +    L+LL+NNAG       +   + +      A N  G FL T+ 
Sbjct: 94  DPDQVAALFAAVRAEFARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQH 153

Query: 154 LLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISR-NKSHYDATRA--YALSK 210
             + M      T   GRI+N  S               Q  R N + Y AT+     L+K
Sbjct: 154 AFRMMK---AQTPRGGRIINNGSI------------SAQTPRPNSAPYTATKHAITGLTK 198

Query: 211 -LANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRE 248
             A      +          ++    +  G   T +T  
Sbjct: 199 STA-----LDGRMH------DIACGQIDIGNAATDMTAR 226

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} Length = 293

 Score =  116 bits (292), Expect = 2e-30
 Identities = 65/277 (23%), Positives = 103/277 (37%), Gaps = 57/277 (20%)

Query: 11  SAGASGYGSKSTAEQVTDGCP----NLSSVTAIITGATSGIGAETARVLAKRGARLVLPA 66
            A   G GS    E           +LS+ + ++TG T GIG   A V A+ GA + + A
Sbjct: 13  EAQTQGPGSMLVVESAEPAERKVMFDLSARSVLVTGGTKGIGRGIATVFARAGANVAVAA 72

Query: 67  RSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLPLNLLINNAGKFA 126
           RS +      A L       +++ + LD+S   S  +           L+++  NAG   
Sbjct: 73  RSPRELSSVTAELGELG-AGNVIGVRLDVSDPGSCADAARTVVDAFGALDVVCANAG--- 128

Query: 127 HQHAISEDG--IEMT-------FATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSS 177
               I  +     MT          N  G     +  L  +  + +     GR++  SS 
Sbjct: 129 ----IFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASGR-----GRVILTSS- 178

Query: 178 IHSWFSGDMIRYLGQISRNKSHYDATRA--YALSK-LANVLHTKELAQRLKQMEANVTVN 234
                +G +  Y G      SHY A++A      +  A      ELA R       VTVN
Sbjct: 179 ----ITGPVTGYPGW-----SHYGASKAAQLGFMRTAA-----IELAPR------GVTVN 218

Query: 235 CVHPGIVRTRLTREREGFITDLVFFLTSKLLKTIPQG 271
            + PG + T    +    + +      S + ++IP G
Sbjct: 219 AILPGNILTEGLVD----MGEEY---ISGMARSIPMG 248

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 Length = 274

 Score =  115 bits (291), Expect = 2e-30
 Identities = 61/263 (23%), Positives = 99/263 (37%), Gaps = 36/263 (13%)

Query: 18  GSKSTAEQVTDGCPNLSSVTAIITGATSGIGAETARVLAKRGARLVLP-ARSLKAAEEAK 76
            +  T+   +D    L+   A+ TGA  GIG   A  L +RGA +V+    S KAAEE  
Sbjct: 4   SADITSSGPSDASKPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVV 63

Query: 77  ARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLPLNLLINNAG--KFAHQHAISED 134
           A L     G+  V +  D+S  S V     +  S    L+ +++N+G   +  +  ++++
Sbjct: 64  AELKKL--GAQGVAIQADISKPSEVVALFDKAVSHFGGLDFVMSNSGMEVWCDELEVTQE 121

Query: 135 GIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQIS 194
             +  F  N  G F + +  LK            GRI+  SS      +  M        
Sbjct: 122 LFDKVFNLNTRGQFFVAQQGLKHCRR-------GGRIILTSSI-----AAVMTGIPNH-- 167

Query: 195 RNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFIT 254
              + Y  ++A A+          +   +       VTVNC+ PG V+T +  E      
Sbjct: 168 ---ALYAGSKA-AVEGFCRAF-AVDCGAK------GVTVNCIAPGGVKTDMFDENSWHYA 216

Query: 255 DLVFFLTS------KLLKTIPQG 271
              +           L    P  
Sbjct: 217 PGGYKGMPQEKIDEGLANMNPLK 239

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} Length = 281

 Score =  115 bits (291), Expect = 2e-30
 Identities = 47/221 (21%), Positives = 77/221 (34%), Gaps = 38/221 (17%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARL-ASDCPGSDIVVLPLDL 95
           T ++TG  SGIG   A  L   GA +++  R+      A   L A    G  I   P D+
Sbjct: 13  TYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDI 72

Query: 96  SSLSSVRNFVSQFHSLNLPLNLLINNAG---KFAHQHAISEDGIEMTFATNYLGHFLLTK 152
           ++       V    + +  L+ +++ AG          +  +    T   N  G   + K
Sbjct: 73  TNEDETARAVDAVTAWHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLK 132

Query: 153 LLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLA 212
              ++M+         G  V +SS                 +          AY ++K +
Sbjct: 133 HAAREMVRGGG-----GSFVGISSI------------AASNTHRWFG-----AYGVTK-S 169

Query: 213 NVLH-TK----ELAQRLKQMEANVTVNCVHPGIVRTRLTRE 248
            V H  +    EL          V VN + PG++RT L   
Sbjct: 170 AVDHLMQLAADELGAS------WVRVNSIRPGLIRTDLVAA 204

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A Length = 255

 Score =  114 bits (288), Expect = 3e-30
 Identities = 66/252 (26%), Positives = 95/252 (37%), Gaps = 56/252 (22%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLS 96
           TA++TG+TSGIG   A+VLA+ GA +VL          A A +A    G   V  P DLS
Sbjct: 6   TALVTGSTSGIGLGIAQVLARAGANIVLNGFG--DPAPALAEIARH--GVKAVHHPADLS 61

Query: 97  SLSSVRNFVSQFHSLNLPLNLLINNAG--KFAHQHAISEDGIEMTFATNYLGHFLLTKLL 154
            ++ +    +        +++L+NNAG    A       +  +   A N    F  T+L 
Sbjct: 62  DVAQIEALFALAEREFGGVDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLA 121

Query: 155 LKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQI-SRNKSHYDA--------TRA 205
           L  M          GRI+N+ +S+H           G + S  K+ Y A        T+ 
Sbjct: 122 LPGMRARNW-----GRIINI-ASVH-----------GLVGSTGKAAYVAAKHGVVGLTKV 164

Query: 206 YALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRE------REGFITDLVFF 259
             L          E A        NVT N + PG V T L ++        G        
Sbjct: 165 VGL----------ETATS------NVTCNAICPGWVLTPLVQKQIDDRAANGGDPLQA-- 206

Query: 260 LTSKLLKTIPQG 271
               L +  P  
Sbjct: 207 QHDLLAEKQPSL 218

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} Length = 251

 Score =  114 bits (287), Expect = 3e-30
 Identities = 30/215 (13%), Positives = 69/215 (32%), Gaps = 41/215 (19%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLS 96
             ++ G +  +GAE  +    +    +          +                  +  S
Sbjct: 24  NILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNADH--------------SFTIKDS 69

Query: 97  SLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAISEDGIEM---TFATNYLGHFLLTKL 153
               +++ + + +S ++ ++  +  AG ++  +A S++ ++        N    F    +
Sbjct: 70  GEEEIKSVIEKINSKSIKVDTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHI 129

Query: 154 LLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLAN 213
             K + +        G  V   +S  +  +       G I           AY  +K A 
Sbjct: 130 GAKLLNQ-------GGLFVLTGAS--AALNRTS----GMI-----------AYGATKAAT 165

Query: 214 VLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRE 248
               K+LA     + A  T   + P  + T   R+
Sbjct: 166 HHIIKDLASENGGLPAGSTSLGILPVTLDTPTNRK 200

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} Length = 277

 Score =  114 bits (289), Expect = 3e-30
 Identities = 54/237 (22%), Positives = 88/237 (37%), Gaps = 32/237 (13%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLS 96
             I+TG  SGIG  TA + AK GA +V+   +  AA      +     GS    + +D+S
Sbjct: 29  VCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEI-----GSKAFGVRVDVS 83

Query: 97  SLSSVRNFVSQFHSLNLPLNLLINNAG--KFAHQHAISEDGIEMTFATNYLGHFLLTKLL 154
           S     + V +  +    +++L+NNAG     +   I E+  +   + N  G FL +K +
Sbjct: 84  SAKDAESMVEKTTAKWGRVDVLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYV 143

Query: 155 LKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLANV 214
           +  M          G I+N +S     ++           R         AY  SK A  
Sbjct: 144 IPVMRRNGG-----GSIINTTS-----YTATS----AIADRT--------AYVASKGAIS 181

Query: 215 LHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSKLLKTIPQG 271
             T+ +A      +  + VN V PG + +    +      D      S         
Sbjct: 182 SLTRAMAMDH--AKEGIRVNAVAPGTIDSPYFTKIFAEAKDPAKLR-SDFNARAVMD 235

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A Length = 252

 Score =  114 bits (287), Expect = 3e-30
 Identities = 49/217 (22%), Positives = 84/217 (38%), Gaps = 31/217 (14%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARL-ASDCPGSDIVVLPLDL 95
             ++TGA+ GIG E A   A+ GA ++L  R+ +   +  + +           +L L  
Sbjct: 14  IILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLT 73

Query: 96  SSLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQ---HAISEDGIEMTFATNYLGHFLLTK 152
            +  + +    +       L+ +++NAG           +    +     N    F+LT+
Sbjct: 74  CTSENCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQ 133

Query: 153 LLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIR-YLGQISRNKSHYDATRAYALSKL 211
            LL  ++++       G +V  SSS      G   R   G             AYA SK 
Sbjct: 134 ALLPLLLKSD-----AGSLVFTSSS-----VGRQGRANWG-------------AYAASKF 170

Query: 212 ANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRE 248
           A     + LA   +Q    + VNC++PG  RT +   
Sbjct: 171 ATEGMMQVLADEYQQ---RLRVNCINPGGTRTAMRAS 204

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A Length = 266

 Score =  114 bits (288), Expect = 4e-30
 Identities = 45/232 (19%), Positives = 76/232 (32%), Gaps = 53/232 (22%)

Query: 32  NLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVL 91
           +L + T ++TG T GIG       A  GA +   AR+     E  ++      G  +   
Sbjct: 11  SLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKK--GFQVTGS 68

Query: 92  PLDLSSLSSVRNFVSQFHS-LNLPLNLLINNAGKFAHQHAISEDG--IEMT-------FA 141
             D S        +    S     L++LINN G              ++ T        +
Sbjct: 69  VCDASLRPEREKLMQTVSSMFGGKLDILINNLG-------AIRSKPTLDYTAEDFSFHIS 121

Query: 142 TNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYD 201
           TN    + L++L    +  +       G I+ +SS              G +S       
Sbjct: 122 TNLESAYHLSQLAHPLLKASGC-----GNIIFMSSIA------------GVVSA------ 158

Query: 202 ATRA-YALSKLANVLHTK----ELAQRLKQMEANVTVNCVHPGIVRTRLTRE 248
           +  + Y+ +K A     +    E A         +  N V P ++ T L   
Sbjct: 159 SVGSIYSATKGALNQLARNLACEWASD------GIRANAVAPAVIATPLAEA 204

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} Length = 254

 Score =  114 bits (287), Expect = 4e-30
 Identities = 44/223 (19%), Positives = 77/223 (34%), Gaps = 45/223 (20%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLS 96
             I+TGA SGIG   A+  A   + +V          +    L     G +++ +  D+S
Sbjct: 9   VVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGM--GKEVLGVKADVS 66

Query: 97  SLSSVRNFV----SQFHSLNLPLNLLINNAG---KFAHQHAISEDGIEMTFATNYLGHFL 149
               V  FV      +      +++L NNAG          +S++  E   A N    F 
Sbjct: 67  KKKDVEEFVRRTFETYSR----IDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFY 122

Query: 150 LTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALS 209
            ++ ++  M++  K     G IVN +S   +   G                     Y ++
Sbjct: 123 SSRAVIPIMLKQGK-----GVIVNTASI--AGIRGGF----AGA-----------PYTVA 160

Query: 210 KLANVLHTK----ELAQRLKQMEANVTVNCVHPGIVRTRLTRE 248
           K   +  T+        +       +    V PG V+T +   
Sbjct: 161 KHGLIGLTRSIAAHYGDQ------GIRAVAVLPGTVKTNIGLG 197

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} Length = 255

 Score =  114 bits (287), Expect = 4e-30
 Identities = 51/244 (20%), Positives = 91/244 (37%), Gaps = 46/244 (18%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLS 96
           TA++TG+  G+G   A  LA  GAR++L         E+   L     G D   +  D++
Sbjct: 11  TALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRK--GYDAHGVAFDVT 68

Query: 97  SLSSVRNFVSQFHSLNLPLNLLINNAG--KFAHQHAISEDGIEMTFATNYLGHFLLTKLL 154
              ++    S+  +  + +++LINNAG         +  +  +    TN    FL+++  
Sbjct: 69  DELAIEAAFSKLDAEGIHVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSA 128

Query: 155 LKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLANV 214
            K+MI         G+I+N+ S         +     + +           Y  +K    
Sbjct: 129 AKRMIA----RNSGGKIINIGS---------LTSQAARPTVA--------PYTAAKGGIK 167

Query: 215 LHTK----ELAQRLKQMEANVTVNCVHPGIVRTRLT---REREGFITDLVFFLTSKLLKT 267
           + T     E AQ       N+  N + PG + T +     E + F         S +  +
Sbjct: 168 MLTCSMAAEWAQF------NIQTNAIGPGYILTDMNTALIEDKQF--------DSWVKSS 213

Query: 268 IPQG 271
            P  
Sbjct: 214 TPSQ 217

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} Length = 276

 Score =  114 bits (288), Expect = 4e-30
 Identities = 61/242 (25%), Positives = 99/242 (40%), Gaps = 43/242 (17%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLS 96
            A+ITGA++GIG + A   A+ GA++ + AR   A +     +A    G   + +  D++
Sbjct: 34  RALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGV--GGKALPIRCDVT 91

Query: 97  SLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAI--SEDGIEMTFATNYLGHFLLTKLL 154
               VR  + Q       +++ + NAG  + Q  +    +  +    TN  G FL  +  
Sbjct: 92  QPDQVRGMLDQMTGELGGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAA 151

Query: 155 LKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLANV 214
            + M++     G+ G I+  +S         M  ++  I +  SHY        SK A V
Sbjct: 152 ARAMVD----QGLGGTIITTAS---------MSGHIINIPQQVSHYCT------SK-AAV 191

Query: 215 LH-TK----ELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSKLLKTIP 269
           +H TK    ELA         + VN V PG +RT L      +         +     IP
Sbjct: 192 VHLTKAMAVELAPH------QIRVNSVSPGYIRTELVEPLADY--------HALWEPKIP 237

Query: 270 QG 271
            G
Sbjct: 238 LG 239

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* Length = 261

 Score =  114 bits (287), Expect = 5e-30
 Identities = 51/218 (23%), Positives = 89/218 (40%), Gaps = 34/218 (15%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLP-ARSLKAAEEAKARLASDCPGSDIVVLPLDL 95
             +ITG+++G+G   A   A   A++V+        A      +     G + + +  D+
Sbjct: 9   VVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKV--GGEAIAVKGDV 66

Query: 96  SSLSSVRNFVSQFHSLNLPLNLLINNAG--KFAHQHAISEDGIEMTFATNYLGHFLLTKL 153
           +  S V N V         L+++INNAG       H +S         TN  G FL ++ 
Sbjct: 67  TVESDVINLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSRE 126

Query: 154 LLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRA--YALSK- 210
            +K  +E      I+G ++N+ SS+H       I +         HY A++     +++ 
Sbjct: 127 AIKYFVE----NDIKGTVINM-SSVHE-----KIPWPLF-----VHYAASKGGMKLMTET 171

Query: 211 LANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRE 248
           LA      E A +       + VN + PG + T +  E
Sbjct: 172 LA-----LEYAPK------GIRVNNIGPGAINTPINAE 198

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 Length = 256

 Score =  114 bits (287), Expect = 5e-30
 Identities = 50/245 (20%), Positives = 96/245 (39%), Gaps = 39/245 (15%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLS 96
            A++TGA  GIG   A  L K G  + +   +   A+   + +     G   V + +D+S
Sbjct: 4   VALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQA--GGHAVAVKVDVS 61

Query: 97  SLSSVRNFVSQFHSLNLPLNLLINNAG--KFAHQHAISEDGIEMTFATNYLGHFLLTKLL 154
               V   V Q        ++++NNAG        +I+ + ++  +  N  G     +  
Sbjct: 62  DRDQVFAAVEQARKTLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAA 121

Query: 155 LKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQI-SRNKSHYDATRA--YALSK- 210
           ++   +     G  G+I+N  S              G + +   + Y +++     L++ 
Sbjct: 122 VEAFKK----EGHGGKIINACSQA------------GHVGNPELAVYSSSKFAVRGLTQT 165

Query: 211 LANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFF----LTSKLLK 266
            A     ++LA         +TVN   PGIV+T +  E +  +++         T++  K
Sbjct: 166 AA-----RDLAPL------GITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAK 214

Query: 267 TIPQG 271
            I  G
Sbjct: 215 RITLG 219

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* Length = 302

 Score =  115 bits (290), Expect = 5e-30
 Identities = 46/240 (19%), Positives = 93/240 (38%), Gaps = 36/240 (15%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLS 96
            A ITG  +G+G     +L+  GA+ V+ +R +   +    +++S   G+ +  +  D+ 
Sbjct: 28  VAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQ-TGNKVHAIQCDVR 86

Query: 97  SLSSVRNFVSQFHSLNLPLNLLINNAG--KFAHQHAISEDGIEMTFATNYLGHFLLTKLL 154
               V+N VS+   +    N++INNA     +    +S +  +        G   +T  +
Sbjct: 87  DPDMVQNTVSELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEI 146

Query: 155 LKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRA--YALSK-L 211
            K++I+  K        +++++              G  S       + +A   A+SK L
Sbjct: 147 GKQLIKAQKG----AAFLSITTIYA---------ETG--SGFVVPSASAKAGVEAMSKSL 191

Query: 212 ANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSKLLKTIPQG 271
           A      E  +        +  N + PG ++T+    R             +++  IP G
Sbjct: 192 A-----AEWGKY------GMRFNVIQPGPIKTKGAFSRLDPTGT----FEKEMIGRIPCG 236

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} Length = 256

 Score =  113 bits (286), Expect = 5e-30
 Identities = 52/251 (20%), Positives = 92/251 (36%), Gaps = 53/251 (21%)

Query: 32  NLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVL 91
           +L+   AI+TGA +GIG   A   AK GA +V+     + AE   A +     G   + L
Sbjct: 9   HLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQA--GGKAIGL 66

Query: 92  PLDLSSLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAISEDG-IEMT-------FATN 143
             +++        +         + +L+NNAG              +M        F  N
Sbjct: 67  ECNVTDEQHREAVIKAALDQFGKITVLVNNAG-------GGGPKPFDMPMSDFEWAFKLN 119

Query: 144 YLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDAT 203
               F L++L    M +        G I+N+SS      +G+            + Y ++
Sbjct: 120 LFSLFRLSQLAAPHMQKAGG-----GAILNISS-----MAGENTNV-RM-----ASYGSS 163

Query: 204 RA--YALSK-LANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFL 260
           +A    L++ +A      ++          + VN + PG ++T         +T  +   
Sbjct: 164 KAAVNHLTRNIA-----FDVGPM------GIRVNAIAPGAIKTDALAT---VLTPEI--- 206

Query: 261 TSKLLKTIPQG 271
              +LK  P G
Sbjct: 207 ERAMLKHTPLG 217

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} Length = 247

 Score =  113 bits (286), Expect = 5e-30
 Identities = 74/252 (29%), Positives = 120/252 (47%), Gaps = 55/252 (21%)

Query: 32  NLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVL 91
           +L+   A++TGA+ GIG E A  LA +GA +V  A S  +AE+ +  +     G     L
Sbjct: 2   SLNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEK--GFKARGL 59

Query: 92  PLDLSSLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAISEDGIEM---------TFAT 142
            L++S + S++NF ++  + NL +++L+NNAG       I+ D + M            T
Sbjct: 60  VLNISDIESIQNFFAEIKAENLAIDILVNNAG-------ITRDNLMMRMSEDEWQSVINT 112

Query: 143 NYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDA 202
           N    F ++K  ++ M+   K     GRI+++ S +    +G+     GQ     ++Y A
Sbjct: 113 NLSSIFRMSKECVRGMM---KKR--WGRIISIGSVVG--SAGN----PGQ-----TNYCA 156

Query: 203 TRA--YALSK-LANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFF 259
            +A     SK LA      E+A R      N+TVN V PG + T +T +    +TD    
Sbjct: 157 AKAGVIGFSKSLA-----YEVASR------NITVNVVAPGFIATDMTDK----LTDEQ-- 199

Query: 260 LTSKLLKTIPQG 271
             S +   IP G
Sbjct: 200 -KSFIATKIPSG 210

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} Length = 259

 Score =  113 bits (286), Expect = 6e-30
 Identities = 53/214 (24%), Positives = 82/214 (38%), Gaps = 32/214 (14%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLP-ARSLKAAEEAKARLASDCPGSDIVVLPLDL 95
           T ++ GA   IG   A   A+ GA +VL    + + A  A A +     G   + +  DL
Sbjct: 10  TIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKL--GRSALAIKADL 67

Query: 96  SSLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQ---HAISEDGIEMTFATNYLGHFLLTK 152
           ++ + V   +S        ++ L++ AG    +     + E         N    FL  K
Sbjct: 68  TNAAEVEAAISAAADKFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAK 127

Query: 153 LLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLA 212
             L KM +        G IV  SS      +G      G +           AYA SK A
Sbjct: 128 TALPKMAK-------GGAIVTFSSQ-----AGRDGGGPGAL-----------AYATSKGA 164

Query: 213 NVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLT 246
            +  T+ LA   K++   + VN V PG++ T   
Sbjct: 165 VMTFTRGLA---KEVGPKIRVNAVCPGMISTTFH 195

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A Length = 259

 Score =  113 bits (286), Expect = 6e-30
 Identities = 49/245 (20%), Positives = 93/245 (37%), Gaps = 42/245 (17%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLS 96
           +A+ITG+  GIG   A    + GA + +    ++ A +A A +     G     + +D++
Sbjct: 10  SALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEI-----GPAAYAVQMDVT 64

Query: 97  SLSSVRNFVSQFHSLNLPLNLLINNAG--KFAHQHAISEDGIEMTFATNYLGHFLLTKLL 154
              S+   ++        L++L+NNA     A    I+ +  E  FA N  G     +  
Sbjct: 65  RQDSIDAAIAATVEHAGGLDILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAA 124

Query: 155 LKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQI-SRNKSHYDATRA--YALSK- 210
            ++MI      G  G+I+N++S              G+      + Y AT+A   +L++ 
Sbjct: 125 ARQMIA----QGRGGKIINMAS------------QAGRRGEALVAIYCATKAAVISLTQS 168

Query: 211 LANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFF----LTSKLLK 266
                   +L +        + VN + PG+V        +                 + +
Sbjct: 169 AG-----LDLIKH------RINVNAIAPGVVDGEHWDGVDALFARYENRPRGEKKRLVGE 217

Query: 267 TIPQG 271
            +P G
Sbjct: 218 AVPFG 222

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* Length = 258

 Score =  113 bits (286), Expect = 7e-30
 Identities = 46/218 (21%), Positives = 83/218 (38%), Gaps = 35/218 (16%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLP-ARSLKAAEEAKARLASDCPGSDIVVLPLDL 95
            A++TG++ G+G   A  LA+ G  +V+  ARS KAA E    +     G  ++V+  ++
Sbjct: 6   CALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKL--GVKVLVVKANV 63

Query: 96  SSLSSVRNFVSQFHSLNLPLNLLINNAG--KFAHQHAISEDGIEMTFATNYLGHFLLTKL 153
              + ++    Q       L++ +NNA          + E   + T   N        + 
Sbjct: 64  GQPAKIKEMFQQIDETFGRLDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQE 123

Query: 154 LLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRA--YALSK- 210
             K M +        G IV++SS         +           +    ++A   AL++ 
Sbjct: 124 AAKLMEKNGG-----GHIVSISSLG------SIRYLENY-----TTVGVSKAALEALTRY 167

Query: 211 LANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRE 248
           LA      EL+ +       + VN V  G + T   + 
Sbjct: 168 LA-----VELSPK------QIIVNAVSGGAIDTDALKH 194

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} Length = 260

 Score =  113 bits (285), Expect = 8e-30
 Identities = 55/247 (22%), Positives = 89/247 (36%), Gaps = 50/247 (20%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLS 96
            AI+TG    IG      LA+ GAR+++       A +A   L  +  G D+  + +D++
Sbjct: 15  VAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRME--GHDVSSVVMDVT 72

Query: 97  SLSSVRNFVSQFHSLNLPLNLLINNAG---KFAHQHAISEDGIEMTFATNYLGHFLLTKL 153
           +  SV+N V   H     +++L+  AG          +++         N  G F   + 
Sbjct: 73  NTESVQNAVRSVHEQEGRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQA 132

Query: 154 LLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYL-GQISRNKSHYDATRAYALSKLA 212
           + + M+E  +     G IV + S      SG ++     Q            AY  SK A
Sbjct: 133 VGRIMLEQKQ-----GVIVAIGS-----MSGLIVNRPQQQA-----------AYNASK-A 170

Query: 213 NVLH-TK----ELAQRLKQMEANVTVNCVHPGIVRTRLTR---EREGFITDLVFFLTSKL 264
            V    +    E A         +  N V P  + T LTR   E+               
Sbjct: 171 GVHQYIRSLAAEWAPH------GIRANAVAPTYIETTLTRFGMEKPELY--------DAW 216

Query: 265 LKTIPQG 271
           +   P G
Sbjct: 217 IAGTPMG 223

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* Length = 254

 Score =  112 bits (283), Expect = 1e-29
 Identities = 47/217 (21%), Positives = 78/217 (35%), Gaps = 37/217 (17%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLS 96
             I   A  GIG +T+R L KR  +  +    ++        L +  P  +I     D++
Sbjct: 7   NVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAE-LKAINPKVNITFHTYDVT 65

Query: 97  -SLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLL 155
             ++  +  + +       +++LIN AG       + +  IE T A N+ G    T  +L
Sbjct: 66  VPVAESKKLLKKIFDQLKTVDILINGAG------ILDDHQIERTIAINFTGLVNTTTAIL 119

Query: 156 KKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQI-SRNKSHYDATRA--YALSK-L 211
               +  +  G  G I N+ S              G         Y A++A   + +  L
Sbjct: 120 DFWDK--RKGGPGGIIANICSVT------------GFNAIHQVPVYSASKAAVVSFTNSL 165

Query: 212 ANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRE 248
           A     K            VT   ++PGI RT L   
Sbjct: 166 A-----KLAPIT------GVTAYSINPGITRTPLVHT 191

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} Length = 260

 Score =  112 bits (283), Expect = 2e-29
 Identities = 52/252 (20%), Positives = 89/252 (35%), Gaps = 65/252 (25%)

Query: 32  NLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVL 91
                  +ITGA+ GIGA   R    R  R+V  +RS+K + +                +
Sbjct: 25  RNQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSADPDI-----------HTV 73

Query: 92  PLDLSSLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAISEDG--IEMT-------FAT 142
             D+S   +    V +       ++ L+NNAG       +      +EMT          
Sbjct: 74  AGDISKPETADRIVREGIERFGRIDSLVNNAG-------VFLAKPFVEMTQEDYDHNLGV 126

Query: 143 NYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDA 202
           N  G F +T+    +M++        G IV++++S       D       +    +    
Sbjct: 127 NVAGFFHITQRAAAEMLKQGS-----GHIVSITTS-----LVDQ----PMVGMPSALASL 172

Query: 203 TRA--YALSK-LANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFF 259
           T+    A+++ LA      E ++        V VN V PG+++T +              
Sbjct: 173 TKGGLNAVTRSLA-----MEFSRS------GVRVNAVSPGVIKTPMHPAE---------- 211

Query: 260 LTSKLLKTIPQG 271
             S L    P G
Sbjct: 212 THSTLAGLHPVG 223

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 Length = 253

 Score =  112 bits (283), Expect = 2e-29
 Identities = 45/214 (21%), Positives = 81/214 (37%), Gaps = 30/214 (14%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLS 96
            A++TG  SG+G E  ++L   GA++     +  A ++  A L     G   + +  D+S
Sbjct: 8   VALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL-----GERSMFVRHDVS 62

Query: 97  SLSSVRNFVSQFHSLNLPLNLLINNAG--KFAHQHAISEDGIEMTFATNYLGHFLLTKLL 154
           S +     ++        LN+L+NNAG            +        N    F+  +  
Sbjct: 63  SEADWTLVMAAVQRRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQG 122

Query: 155 LKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLANV 214
           +  M    K TG  G I+N++S                +   +        Y+ SK A  
Sbjct: 123 IAAM----KETG--GSIINMAS------------VSSWLPIEQYA-----GYSASKAAVS 159

Query: 215 LHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRE 248
             T+  A   ++    + VN +HP  + T + + 
Sbjct: 160 ALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQA 193

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* Length = 241

 Score =  112 bits (281), Expect = 2e-29
 Identities = 30/215 (13%), Positives = 65/215 (30%), Gaps = 37/215 (17%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLS 96
             ++ G    +G+   +    R   +          EEA A +         V +    +
Sbjct: 9   RVLVYGGRGALGSRCVQAFRARNWWVASIDVV--ENEEASASVI--------VKMTDSFT 58

Query: 97  SLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAISEDGIEM---TFATNYLGHFLLTKL 153
             +            +  ++ ++  AG +A  +A S+   +     +  +     + + L
Sbjct: 59  EQADQVTAEVGKLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHL 118

Query: 154 LLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLAN 213
             K + E        G +    +   +   G      G I            Y ++K A 
Sbjct: 119 ATKHLKE-------GGLLTLAGAK--AALDGTP----GMI-----------GYGMAKGAV 154

Query: 214 VLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRE 248
               + LA +   M +      V P  + T + R+
Sbjct: 155 HQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNRK 189

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* Length = 247

 Score =  112 bits (282), Expect = 2e-29
 Identities = 51/224 (22%), Positives = 95/224 (42%), Gaps = 50/224 (22%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLS 96
           TA++TGA  GIG   A  LA  GA +++   + + A+ A A +     G     +  D+S
Sbjct: 8   TALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASI-----GKKARAIAADIS 62

Query: 97  SLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAISEDG--IEMT-------FATNYLGH 147
              SV+   ++  +L   +++L+NNA        I       ++           N  G 
Sbjct: 63  DPGSVKALFAEIQALTGGIDILVNNAS-------IVPFVAWDDVDLDHWRKIIDVNLTGT 115

Query: 148 FLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRA-- 205
           F++T+    +M    KA    GR+++++S+  ++F+G             + Y A +   
Sbjct: 116 FIVTRAGTDQMRAAGKA----GRVISIASN--TFFAGTP----NM-----AAYVAAKGGV 160

Query: 206 YALSK-LANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRE 248
              ++ LA      EL +       N+T N V PG++ +   + 
Sbjct: 161 IGFTRALA-----TELGKY------NITANAVTPGLIESDGVKA 193

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} Length = 253

 Score =  112 bits (282), Expect = 2e-29
 Identities = 50/220 (22%), Positives = 90/220 (40%), Gaps = 40/220 (18%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLS 96
             I+TG+  GIG   A  LA+ GA +V+   + +AAE    ++ +D  G   + + +D+S
Sbjct: 11  VGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVAD--GGTAISVAVDVS 68

Query: 97  SLSSVRNFVSQFHSLNLPLNLLINNAG-----KFAHQHAISEDGIEMTFATNYLGHFLLT 151
              S +    +  +    ++ L+NNA      K      I  +  +   + N  G    T
Sbjct: 69  DPESAKAMADRTLAEFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCT 128

Query: 152 KLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRA--YALS 209
           + + KKM +        G IVN SS+     +  +           ++Y   +     L+
Sbjct: 129 RAVYKKMTKRGG-----GAIVNQSST-----AAWL----YS-----NYYGLAKVGINGLT 169

Query: 210 K-LANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRE 248
           + L+     +EL  R      N+ +N + PG + T   R 
Sbjct: 170 QQLS-----RELGGR------NIRINAIAPGPIDTEANRT 198

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} Length = 272

 Score =  112 bits (283), Expect = 2e-29
 Identities = 59/243 (24%), Positives = 100/243 (41%), Gaps = 32/243 (13%)

Query: 33  LSSVTAIITGATSGIGAETARVLAKRGARLVLP-ARSLKAAEEAKARLASDCPGSDIVVL 91
             +   ++TG + GIGA   R+ A++G R+ +  A + +AA+   A +     G + V +
Sbjct: 24  SDTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITES--GGEAVAI 81

Query: 92  PLDLSSLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQ---HAISEDGIEMTFATNYLGHF 148
           P D+ + + +    S        L+ L+NNAG   +      +S + IE     N  G  
Sbjct: 82  PGDVGNAADIAAMFSAVDRQFGRLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSI 141

Query: 149 LLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYAL 208
           L     +++M       G  G IVNVSS         ++    Q       Y A++A A+
Sbjct: 142 LCAAEAVRRMSRLYSGQG--GAIVNVSSMA------AILGSATQY----VDYAASKA-AI 188

Query: 209 SKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSKLLKTI 268
                 L  +E+A         + VN V PGI+ T L     G + D       ++  ++
Sbjct: 189 DTFTIGL-AREVAAE------GIRVNAVRPGIIETDLH--ASGGLPDRA----REMAPSV 235

Query: 269 PQG 271
           P  
Sbjct: 236 PMQ 238

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* Length = 260

 Score =  112 bits (282), Expect = 3e-29
 Identities = 49/214 (22%), Positives = 82/214 (38%), Gaps = 31/214 (14%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLS 96
            A+++G   G+GA   R +   GA++V      +  +   A L           + LD++
Sbjct: 9   VALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAEL-----ADAARYVHLDVT 63

Query: 97  SLSSVRNFVSQFHSLNLPLNLLINNAG--KFAHQHAISEDGIEMTFATNYLGHFLLTKLL 154
             +  +  V    +    L++L+NNAG          +    +     N  G FL  + +
Sbjct: 64  QPAQWKAAVDTAVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAV 123

Query: 155 LKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLANV 214
           +K M E  +     G I+N+SS              G       H      Y  +K A  
Sbjct: 124 VKPMKEAGR-----GSIINISS------------IEGLAGTVACH-----GYTATKFAVR 161

Query: 215 LHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRE 248
             TK  A  L    + + VN +HPG+V+T +T  
Sbjct: 162 GLTKSTALELGP--SGIRVNSIHPGLVKTPMTDW 193

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 236

 Score =  111 bits (279), Expect = 3e-29
 Identities = 32/221 (14%), Positives = 72/221 (32%), Gaps = 41/221 (18%)

Query: 33  LSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLP 92
           +SS   I+ G    +G+       K G  ++    S  A ++A +           +++ 
Sbjct: 1   MSSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLS--ANDQADSN----------ILVD 48

Query: 93  LDLSSLSSVRNFVSQFHSLN--LPLNLLINNAGKFAHQHAISEDGIE---MTFATNYLGH 147
            + +     ++ + Q  S      ++ +   AG +A   A S+D ++   +    +    
Sbjct: 49  GNKNWTEQEQSILEQTASSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSS 108

Query: 148 FLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYA 207
            +  KL    +          G +    ++  +                         Y 
Sbjct: 109 AIAAKLATTHLKP-------GGLLQLTGAA--AAMGPTPSMI---------------GYG 144

Query: 208 LSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRE 248
           ++K A    T  LA +   +  N  V  + P  + T + R+
Sbjct: 145 MAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNRK 185

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 Length = 244

 Score =  111 bits (280), Expect = 3e-29
 Identities = 48/222 (21%), Positives = 81/222 (36%), Gaps = 41/222 (18%)

Query: 37  TAIITGATSGIGAETARVLAKRGAR-------LVLPARSLKAAEEAKARLASDCPGSDIV 89
             +ITGA  GIG   A   A+           LVL +R+    E+      ++  G+   
Sbjct: 4   ILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAE--GALTD 61

Query: 90  VLPLDLSSLSSVRNFVSQFHSLNLPLNLLINNAG--KFAHQHAISEDGIEMTFATNYLGH 147
            +  D+S ++ VR   +        ++ L+NNAG  +F     ++E+  + T  TN  G 
Sbjct: 62  TITADISDMADVRRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGT 121

Query: 148 FLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRA-- 205
           F LT+ L   M          G I  ++S      +     +        S Y  ++   
Sbjct: 122 FFLTQALFALMERQHS-----GHIFFITS-----VAATKA-FRHS-----SIYCMSKFGQ 165

Query: 206 YALSK-LANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLT 246
             L + +          +       NV +  V PG V T + 
Sbjct: 166 RGLVETMR-----LYARKC------NVRITDVQPGAVYTPMW 196

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* Length = 283

 Score =  112 bits (282), Expect = 3e-29
 Identities = 49/250 (19%), Positives = 99/250 (39%), Gaps = 36/250 (14%)

Query: 31  PNLSSVTAIITGATSGIGAETARVLAKRGARLVLP-ARSLKAAEEAKARLASDCPGSDIV 89
            +L    A++TGA  GIG E A  L +RG ++++  A S ++AEE  A +  +  GSD  
Sbjct: 25  ASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKN--GSDAA 82

Query: 90  VLPLDLSSLSSVRNFVSQFHSLNLPLNLLINNAG--KFAHQHAISEDGIEMTFATNYLGH 147
            +  ++  +  +     +   +   L+++ +N+G   F H   ++ +  +  F  N  G 
Sbjct: 83  CVKANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQ 142

Query: 148 FLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYA 207
           F + +   K +          GR++ + S       G             + Y  ++  A
Sbjct: 143 FFVAREAYKHLEI-------GGRLILMGSIT-----GQAKAVPKH-----AVYSGSKG-A 184

Query: 208 LSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTS----- 262
           +   A  +   ++A +       +TVN V PG ++T +              L++     
Sbjct: 185 IETFARCM-AIDMADK------KITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDE 237

Query: 263 -KLLKTIPQG 271
              ++  P  
Sbjct: 238 YAAVQWSPLR 247

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} Length = 250

 Score =  111 bits (280), Expect = 3e-29
 Identities = 53/225 (23%), Positives = 89/225 (39%), Gaps = 46/225 (20%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLS 96
            AI+TGA+SG G   A     RG R+     S +  EE  AR         ++ +  D++
Sbjct: 4   VAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEET-ARTHWHAYADKVLRVRADVA 62

Query: 97  SLSSVRNFVSQ----FHSLNLPLNLLINNAG-----KFAHQHAISEDGIEMTFATNYLGH 147
               V   ++     F +    +++L+NNAG     +    H    +  +   A N  G 
Sbjct: 63  DEGDVNAAIAATMEQFGA----IDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGI 118

Query: 148 FLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYA 207
           FL  + +L  M+         G IVN++S      +  ++ + G+            AY 
Sbjct: 119 FLGCRAVLPHMLLQGA-----GVIVNIAS-----VAS-LVAFPGRS-----------AYT 156

Query: 208 LSKLANVLHTK----ELAQRLKQMEANVTVNCVHPGIVRTRLTRE 248
            SK A +  TK    + A         +  N V PG++ T +T+ 
Sbjct: 157 TSKGAVLQLTKSVAVDYAGS------GIRCNAVCPGMIETPMTQW 195

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} Length = 249

 Score =  111 bits (280), Expect = 4e-29
 Identities = 60/252 (23%), Positives = 118/252 (46%), Gaps = 62/252 (24%)

Query: 32  NLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVL 91
           +L+  T++ITGA+SGIG+  AR+L K G+++++   + +  +     L       +  + 
Sbjct: 11  DLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNAL-----KDNYTIE 65

Query: 92  PLDLSSLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAISEDGIEM---------TFAT 142
             +L++     N +S+  +    L++L+ NAG       I+ D + +             
Sbjct: 66  VCNLANKEECSNLISKTSN----LDILVCNAG-------ITSDTLAIRMKDQDFDKVIDI 114

Query: 143 NYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDA 202
           N   +F+L +  +KKMI   +     GRI+N+SS +    +G+     GQ     ++Y A
Sbjct: 115 NLKANFILNREAIKKMI---QKR--YGRIINISSIVG--IAGN----PGQ-----ANYCA 158

Query: 203 TRA--YALSK-LANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFF 259
           ++A    ++K L+      E+A R       +TVN V PG +++ +T +    + +    
Sbjct: 159 SKAGLIGMTKSLS-----YEVATR------GITVNAVAPGFIKSDMTDK----LNEKQ-- 201

Query: 260 LTSKLLKTIPQG 271
               +++ IP G
Sbjct: 202 -REAIVQKIPLG 212

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} Length = 266

 Score =  111 bits (281), Expect = 4e-29
 Identities = 47/237 (19%), Positives = 77/237 (32%), Gaps = 39/237 (16%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLS 96
            A++TGA  GIG      L   GAR+ +  R++                     LP DL 
Sbjct: 30  VALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIAADLH-------------LPGDLR 76

Query: 97  SLSSVRNFVSQFHSLNLPLNLLINNAG--KFAHQHAISEDGIEMTFATNYLGHFLLTKLL 154
             +          +    L++++NNAG          ++    ++   N    F + +  
Sbjct: 77  EAAYADGLPGAVAAGLGRLDIVVNNAGVISRGRITETTDADWSLSLGVNVEAPFRICRAA 136

Query: 155 LKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLANV 214
           +  M          G IVNV+S       G      G              Y L+K A  
Sbjct: 137 IPLMAAAGG-----GAIVNVAS-----CWGLRPGP-GHA-----------LYCLTKAALA 174

Query: 215 LHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSKLLKTIPQG 271
             T+ +          + +N V P  V T + R              ++L +T+P G
Sbjct: 175 SLTQCMGMDHAPQ--GIRINAVCPNEVNTPMLRTGFAKRGFDPDRAVAELGRTVPLG 229

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} Length = 244

 Score =  111 bits (279), Expect = 4e-29
 Identities = 44/247 (17%), Positives = 71/247 (28%), Gaps = 57/247 (23%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLS 96
             ++TG + GIG     +L +     V+     ++      +            +  DL+
Sbjct: 6   NYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFSAENLK-----------FIKADLT 54

Query: 97  SLSSVRNFVSQ--FHSLNLPLNLLINNAG--KFAHQHAISEDGIEMTFATNYLGHFLLTK 152
               + N +      S     + +  NAG         I  + I+     N        K
Sbjct: 55  KQQDITNVLDIIKNVS----FDGIFLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIK 110

Query: 153 LLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLA 212
            L   +            IV    S           ++ + +          AY LSK A
Sbjct: 111 GLENNLKV-------GASIVFN-GSDQC--------FIAKPNSF--------AYTLSKGA 146

Query: 213 NVLHTK----ELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFF----LTSKL 264
               TK    +LA+        + VN V PG V T L R       + V         + 
Sbjct: 147 IAQMTKSLALDLAKY------QIRVNTVCPGTVDTDLYRNLIQKYANNVGISFDEAQKQE 200

Query: 265 LKTIPQG 271
            K  P  
Sbjct: 201 EKEFPLN 207

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A Length = 270

 Score =  111 bits (280), Expect = 5e-29
 Identities = 53/243 (21%), Positives = 95/243 (39%), Gaps = 35/243 (14%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLP-ARSLKAAEEAKARLASDCPGSDIVVLPLDL 95
            A++TG+  GIGA  A  L + GA++V+  A S K AE+  + + +   GSD + +  D+
Sbjct: 20  VALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKAL--GSDAIAIKADI 77

Query: 96  SSLSSVRNFVSQFHSLNLPLNLLINNAG--KFAHQHAISEDGIEMTFATNYLGHFLLTKL 153
             +  +     Q  +    L++ ++N+G   F H   ++E+  +  F+ N  G F + + 
Sbjct: 78  RQVPEIVKLFDQAVAHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVARE 137

Query: 154 LLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLAN 213
             + + E        GRIV  SS+                    S Y  ++  A+     
Sbjct: 138 AYRHLTE-------GGRIVLTSSNT-----SKDFSVPKH-----SLYSGSKG-AVDSFVR 179

Query: 214 VLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTS-----KLLKTI 268
           +  +K+   +       +TVN V PG   T +  E            T+           
Sbjct: 180 IF-SKDCGDK------KITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHAS 232

Query: 269 PQG 271
           P  
Sbjct: 233 PLH 235

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 Length = 262

 Score =  111 bits (280), Expect = 5e-29
 Identities = 58/252 (23%), Positives = 92/252 (36%), Gaps = 48/252 (19%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLS 96
             ++TGA   IG  TA  LA+ G  + L   + +A E+A+A +     G +      D++
Sbjct: 9   VCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREK--GVEARSYVCDVT 66

Query: 97  SLSSVRNFVSQFHSLNLPLNLLINNAG---KFAHQHAISEDGIEMTFATNYLGHFLLTKL 153
           S  +V   V         ++ L NNAG    FA       D        N  G F + K 
Sbjct: 67  SEEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKA 126

Query: 154 LLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQI-SRNKSHYDATRAYALSKLA 212
           + ++MI         GRIVN +S              G     N + Y        SK A
Sbjct: 127 VSRQMITQNY-----GRIVNTASM------------AGVKGPPNMAAYGT------SKGA 163

Query: 213 NVLHTK----ELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTS------ 262
            +  T+    +LA        N+ VN + PG +      ER+  +   V           
Sbjct: 164 IIALTETAALDLAPY------NIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKV 217

Query: 263 ---KLLKTIPQG 271
              +++ ++P  
Sbjct: 218 VAQQMIGSVPMR 229

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} Length = 252

 Score =  111 bits (279), Expect = 5e-29
 Identities = 39/221 (17%), Positives = 75/221 (33%), Gaps = 30/221 (13%)

Query: 32  NLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVL 91
              + T  + GA   IGAE A+  A  G  +    R+ +      A + +   G  IV  
Sbjct: 4   TPRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAA--GGRIVAR 61

Query: 92  PLDLSSLSSVRNFVSQFHSLNLPLNLLINNAG--KFAHQHAISEDGIEMTFATNYLGHFL 149
            LD  +   V  F++   +   PL + I N G          ++      +       F+
Sbjct: 62  SLDARNEDEVTAFLNAADAHA-PLEVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFV 120

Query: 150 LTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALS 209
             +   + M+   +     G+I    ++     +              + + + +   L 
Sbjct: 121 SGRESARLMLAHGQ-----GKIFFTGAT-----ASLRGG------SGFAAFASAKF-GLR 163

Query: 210 KLANVLHTKELAQRLKQMEANVTV-NCVHPGIVRTRLTRER 249
            +A  +  +EL  +      N+ V + +    V T   RER
Sbjct: 164 AVAQSMA-RELMPK------NIHVAHLIIDSGVDTAWVRER 197

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} Length = 271

 Score =  111 bits (280), Expect = 6e-29
 Identities = 53/234 (22%), Positives = 99/234 (42%), Gaps = 30/234 (12%)

Query: 18  GSKSTAEQVTDGCPNLSSVTAIITGATSGIGAETARVLAKRGARLVLP-ARSLKAAEEAK 76
           G+++   Q      +L+  TA +TG + GIGA  A+ LA  GA + L    + + A+   
Sbjct: 14  GTENLYFQSMMTSISLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVV 73

Query: 77  ARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLPLNLLINNAG--KFAHQHAISED 134
           + +     G   V +  D     ++   + +       L++L+N+AG    A     +  
Sbjct: 74  SEIEQA--GGRAVAIRADNRDAEAIEQAIRETVEALGGLDILVNSAGIWHSAPLEETTVA 131

Query: 135 GIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQIS 194
             +   A N+   F+  +   + + +        GRI+ + S++      +++ + G   
Sbjct: 132 DFDEVMAVNFRAPFVAIRSASRHLGD-------GGRIITIGSNLA-----ELVPWPGI-- 177

Query: 195 RNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRE 248
              S Y A++A AL+ L   L  ++L  R       +TVN VHPG   T +   
Sbjct: 178 ---SLYSASKA-ALAGLTKGL-ARDLGPR------GITVNIVHPGSTDTDMNPA 220

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* Length = 277

 Score =  111 bits (280), Expect = 7e-29
 Identities = 57/256 (22%), Positives = 98/256 (38%), Gaps = 45/256 (17%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLS 96
            A ITG  SGIG   A +  + G   V+ +RSL     A  +LA    G   + L +D+ 
Sbjct: 29  VAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGA-TGRRCLPLSMDVR 87

Query: 97  SLSSVRNFVSQFHSLNLPLNLLINNAG--KFAHQHAISEDGIEMTFATNYLGHFLLTKLL 154
           +  +V   V Q       +++LIN A         A+S +  +     +  G F ++++L
Sbjct: 88  APPAVMAAVDQALKEFGRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVL 147

Query: 155 LKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRA--YALSK-L 211
            +K           G IVN+++++            GQ  +   H  + +A   A+++ L
Sbjct: 148 YEKFFRDHG-----GVIVNITATLG---------NRGQALQ--VHAGSAKAAVDAMTRHL 191

Query: 212 ANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSKLLKTIPQG 271
           A      E   +      N+ VN + PG +       R G     +    S  +   P  
Sbjct: 192 A-----VEWGPQ------NIRVNSLAPGPISGTEGLRRLGGPQASL----STKVTASPLQ 236

Query: 272 --------AATTCYVA 279
                   A +  Y+A
Sbjct: 237 RLGNKTEIAHSVLYLA 252

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A Length = 266

 Score =  111 bits (279), Expect = 8e-29
 Identities = 65/252 (25%), Positives = 107/252 (42%), Gaps = 58/252 (23%)

Query: 32  NLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVL 91
            L+   A++TGAT GIG   AR    +GA + L        +E  A L     G D+ V 
Sbjct: 24  KLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADL-----GKDVFVF 78

Query: 92  PLDLSSLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAISEDGIEM---------TFAT 142
             +LS   S++            +++L+NNAG       I+ DG+ +           A 
Sbjct: 79  SANLSDRKSIKQLAEVAEREMEGIDILVNNAG-------ITRDGLFVRMQDQDWDDVLAV 131

Query: 143 NYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDA 202
           N      LT+ L+  M+   +     GRI+N++S +     G+     GQ     ++Y A
Sbjct: 132 NLTAASTLTRELIHSMM---RRR--YGRIINITSIVG--VVGN----PGQ-----TNYCA 175

Query: 203 TRA--YALSK-LANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFF 259
            +A     SK LA     +E+A R      N+TVNC+ PG +++ +T +    + +    
Sbjct: 176 AKAGLIGFSKALA-----QEIASR------NITVNCIAPGFIKSAMTDK----LNEKQ-- 218

Query: 260 LTSKLLKTIPQG 271
               ++  IP  
Sbjct: 219 -KEAIMAMIPMK 229

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 Length = 265

 Score =  111 bits (279), Expect = 8e-29
 Identities = 57/250 (22%), Positives = 85/250 (34%), Gaps = 52/250 (20%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLS 96
           T I+TG   GIG    R +A  GA + +  RS   A E   ++  +  G        D+S
Sbjct: 16  TIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEF-GVKTKAYQCDVS 74

Query: 97  SLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAISEDG--IEMT-------FATNYLGH 147
           +   V   + Q  +   P++ LI NAG       +S      E+T       +  N  G 
Sbjct: 75  NTDIVTKTIQQIDADLGPISGLIANAG-------VSVVKPATELTHEDFAFVYDVNVFGV 127

Query: 148 FLLTKLLLKKMIETAKATGIQGRIVNVSS-SIHSWFSGDMIRYLGQISRNKSHYDATRAY 206
           F   + + K  ++  +     G IV  SS S        +   L Q+            Y
Sbjct: 128 FNTCRAVAKLWLQKQQK----GSIVVTSSMSSQIINQSSLNGSLTQV-----------FY 172

Query: 207 ALSKLANVLH-TK----ELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLT 261
             SK A   +  K    E A         + VN + PG V T  T         +   + 
Sbjct: 173 NSSK-AACSNLVKGLAAEWASA------GIRVNALSPGYVNTDQTAH-------MDKKIR 218

Query: 262 SKLLKTIPQG 271
                 IP  
Sbjct: 219 DHQASNIPLN 228

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 Length = 263

 Score =  110 bits (278), Expect = 9e-29
 Identities = 52/247 (21%), Positives = 90/247 (36%), Gaps = 61/247 (24%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLS 96
           T ++TGA SGIG     + A+ GA LV   R  +   EA A L      ++ + +  D+S
Sbjct: 8   TILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAAL-----EAEAIAVVADVS 62

Query: 97  SLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAISEDG--IEMT-------FATNYLGH 147
              +V    ++       L+ + + AG       ++       +           N  G 
Sbjct: 63  DPKAVEAVFAEALEEFGRLHGVAHFAG-------VAHSALSWNLPLEAWEKVLRVNLTGS 115

Query: 148 FLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRA-- 205
           FL+ +   + + E        G +V   S       G      G      +HY A +   
Sbjct: 116 FLVARKAGEVLEE-------GGSLVLTGSVAG---LGAF----GL-----AHYAAGKLGV 156

Query: 206 YALSK-LANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSKL 264
             L++ LA      ELA++       V VN + PG+++T +T      +         + 
Sbjct: 157 VGLARTLA-----LELARK------GVRVNVLLPGLIQTPMTAG----LPPWA---WEQE 198

Query: 265 LKTIPQG 271
           +   P G
Sbjct: 199 VGASPLG 205

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 Length = 256

 Score =  110 bits (278), Expect = 9e-29
 Identities = 49/237 (20%), Positives = 71/237 (29%), Gaps = 35/237 (14%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLS 96
             ++TG   GIG   A+  A+ GA + L     +  E A+A               +DL 
Sbjct: 8   GVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEVAEAIGG--------AFFQVDLE 59

Query: 97  SLSSVRNFVSQFHSLNLPLNLLINNAG--KFAHQHAISEDGIEMTFATNYLGHFLLTKLL 154
                  FV +       +++L+NNA          +           N      L+ L 
Sbjct: 60  DERERVRFVEEAAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALA 119

Query: 155 LKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLANV 214
            ++M +        G IVNV+S       G                    AY  SK   V
Sbjct: 120 AREMRKVGG-----GAIVNVAS-----VQGLFAEQ-ENA-----------AYNASKGGLV 157

Query: 215 LHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSKLLKTIPQG 271
             T+ LA  L      + VN V PG + T    E      D                
Sbjct: 158 NLTRSLALDL--APLRIRVNAVAPGAIATEAVLEAIALSPDPERTR-RDWEDLHALR 211

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} Length = 234

 Score =  109 bits (276), Expect = 1e-28
 Identities = 56/212 (26%), Positives = 83/212 (39%), Gaps = 32/212 (15%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLS 96
             +ITGA+ GIG  TAR+L  +G R+ L AR  K  +   A L         + LP D+ 
Sbjct: 7   AVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAEL------EGALPLPGDVR 60

Query: 97  SLSSVRNFVSQFHSLNLPLNLLINNAG--KFAHQHAISEDGIEMTFATNYLGHFLLTKLL 154
                   V+        L+ L+NNAG       H ++ +   +   TN  G FL  +  
Sbjct: 61  EEGDWARAVAAMEEAFGELSALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHA 120

Query: 155 LKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLANV 214
           +  ++         G IVNV S      +G          +  + Y+A++   L  LA  
Sbjct: 121 VPALLRRGG-----GTIVNVGS-----LAGK------NPFKGGAAYNASKF-GLLGLAGA 163

Query: 215 LHTKELAQRLKQMEANVTVNCVHPGIVRTRLT 246
               +L +       NV V  V PG V T   
Sbjct: 164 AM-LDLREA------NVRVVNVLPGSVDTGFA 188

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} PDB: 3rsh_A* 3rro_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E Length = 248

 Score =  110 bits (277), Expect = 1e-28
 Identities = 69/252 (27%), Positives = 112/252 (44%), Gaps = 58/252 (23%)

Query: 32  NLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVL 91
           NL    A++TGA+ GIG   A +LA+RGA+++  A S   A+     L     G +   +
Sbjct: 6   NLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYL-----GDNGKGM 60

Query: 92  PLDLSSLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAISEDGIEMT---------FAT 142
            L++++  S+   +         +++L+NNAG       I+ D + M            T
Sbjct: 61  ALNVTNPESIEAVLKAITDEFGGVDILVNNAG-------ITRDNLLMRMKEEEWSDIMET 113

Query: 143 NYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDA 202
           N    F L+K +L+ M+   K    QGRI+NV S +     G+     GQ     ++Y A
Sbjct: 114 NLTSIFRLSKAVLRGMM---KKR--QGRIINVGSVVG--TMGNA----GQ-----ANYAA 157

Query: 203 TRA--YALSK-LANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFF 259
            +A     +K +A     +E+A R       VTVN V PG + T +T+     + D    
Sbjct: 158 AKAGVIGFTKSMA-----REVASR------GVTVNTVAPGFIETDMTKA----LNDEQ-- 200

Query: 260 LTSKLLKTIPQG 271
             +  L  +P G
Sbjct: 201 -RTATLAQVPAG 211

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* Length = 249

 Score =  109 bits (276), Expect = 1e-28
 Identities = 54/217 (24%), Positives = 91/217 (41%), Gaps = 36/217 (16%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLS 96
            A+ITG  +GIG   A   A  GA + +       A EA+A + +   G  ++ +  D+S
Sbjct: 9   LAVITGGANGIGRAIAERFAVEGADIAIADLV--PAPEAEAAIRNL--GRRVLTVKCDVS 64

Query: 97  SLSSVRNFVSQFHSLNLPLNLLINNAG--KFAHQHAISEDGIEMTFATNYLGHFLLTKLL 154
               V  F  Q  S     ++L+NNAG         ++ +  + TF  N    FL+ K  
Sbjct: 65  QPGDVEAFGKQVISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAF 124

Query: 155 LKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRA--YALSK-L 211
           +  M          GRI+N++S+  +++               +HY +T+A     ++ L
Sbjct: 125 VPGMKRNGW-----GRIINLTST--TYWLKIE----AY-----THYISTKAANIGFTRAL 168

Query: 212 ANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRE 248
           A      +L +        +TVN + P +VRT  T  
Sbjct: 169 A-----SDLGKD------GITVNAIAPSLVRTATTEA 194

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} Length = 262

 Score =  110 bits (277), Expect = 2e-28
 Identities = 43/217 (19%), Positives = 74/217 (34%), Gaps = 33/217 (15%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVL---PARSLKAAEEAKARLASDCPGSDIVVLPL 93
             +I G    +GA TA+  A     LVL    A+    A + K  L     G+ + +   
Sbjct: 13  VIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQ--GAKVALYQS 70

Query: 94  DLSSLSSVRNFVSQFHSLNLPLNLLINNAG--KFAHQHAISEDGIEMTFATNYLGHFLLT 151
           DLS+   V             +++ IN  G          SE   +     N    +   
Sbjct: 71  DLSNEEEVAKLFDFAEKEFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFI 130

Query: 152 KLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKL 211
           K   K M          G I+ +++S+ + ++G             S Y   +A  +   
Sbjct: 131 KQAAKHMNP-------NGHIITIATSLLAAYTG------FY-----STYAGNKA-PVEHY 171

Query: 212 ANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRE 248
                +KEL ++       ++VN + PG + T     
Sbjct: 172 TRAA-SKELMKQ------QISVNAIAPGPMDTSFFYG 201

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} Length = 258

 Score =  109 bits (276), Expect = 2e-28
 Identities = 48/246 (19%), Positives = 97/246 (39%), Gaps = 39/246 (15%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLP--ARSLKAAEEAKARLASDCPGSDIVVLPLD 94
            A++TG   GIG   +  LA  G  + +    +  + A E    + +       V + LD
Sbjct: 4   VAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAA--DQKAVFVGLD 61

Query: 95  LSSLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTK 152
           ++  ++  + + +        ++L+NNAG    +    ++E+ ++  ++ N    F   +
Sbjct: 62  VTDKANFDSAIDEAAEKLGGFDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQ 121

Query: 153 LLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRA--YALSK 210
              +K  E     G++G+I+N +S   +   G             S Y  T+     L++
Sbjct: 122 AASRKFDE----LGVKGKIINAASI--AAIQG---------FPILSAYSTTKFAVRGLTQ 166

Query: 211 -LANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTS----KLL 265
             A     +ELA +        TVN   PGIV T +  + +  ++ +          +  
Sbjct: 167 AAA-----QELAPK------GHTVNAYAPGIVGTGMWEQIDAELSKINGKPIGENFKEYS 215

Query: 266 KTIPQG 271
            +I  G
Sbjct: 216 SSIALG 221

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} Length = 264

 Score =  109 bits (276), Expect = 2e-28
 Identities = 60/257 (23%), Positives = 106/257 (41%), Gaps = 58/257 (22%)

Query: 33  LSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLAS-----DCPGSD 87
           L S  A++TGA SGIG   +  LA  GA +        AA+E    L         P  +
Sbjct: 5   LRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGN 64

Query: 88  IVVLPLDLSSLSSVRNFVSQFHS-LNLPLNLLINNAGKFAHQHAISEDGIEMT------- 139
                 D+S   + R  + Q  +  + P +++++ AG       I++D   +        
Sbjct: 65  HAAFQADVSEARAARCLLEQVQACFSRPPSVVVSCAG-------ITQDEFLLHMSEDDWD 117

Query: 140 --FATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNK 197
              A N  G FL+T+   + ++        +G I+N+SS +     G++    GQ     
Sbjct: 118 KVIAVNLKGTFLVTQAAAQALVSNGC----RGSIINISSIVG--KVGNV----GQ----- 162

Query: 198 SHYDATRA--YALSK-LANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFIT 254
           ++Y A++A    L++  A     +EL +        +  N V PG + T +T++    + 
Sbjct: 163 TNYAASKAGVIGLTQTAA-----RELGRH------GIRCNSVLPGFIATPMTQK----VP 207

Query: 255 DLVFFLTSKLLKTIPQG 271
             V     K+ + IP G
Sbjct: 208 QKV---VDKITEMIPMG 221

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* Length = 281

 Score =  110 bits (277), Expect = 2e-28
 Identities = 53/249 (21%), Positives = 86/249 (34%), Gaps = 49/249 (19%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLS 96
            A+ITG  SG+G          GAR+ +  +S +   E +        G + V +  D+ 
Sbjct: 7   VALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAH-----GGNAVGVVGDVR 61

Query: 97  SLSSVRNFV----SQFHSLNLPLNLLINNAG---KFAHQHAISEDGIEMTF----ATNYL 145
           SL   +       + F      ++ LI NAG          + ED I+  F      N  
Sbjct: 62  SLQDQKRAAERCLAAFGK----IDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVK 117

Query: 146 GHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRA 205
           G+    K  L  ++ +      +G +V   S+             G              
Sbjct: 118 GYIHAVKACLPALVSS------RGSVVFTISNA------------GFYPNGGGP-----L 154

Query: 206 YALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFF---LTS 262
           Y  +K A V   +++A  L     +V VN V PG + T L       +++       L  
Sbjct: 155 YTATKHAVVGLVRQMAFELAP---HVRVNGVAPGGMNTDLRGPSSLGLSEQSISSVPLAD 211

Query: 263 KLLKTIPQG 271
            L   +P G
Sbjct: 212 MLKSVLPIG 220

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} Length = 270

 Score =  109 bits (276), Expect = 2e-28
 Identities = 71/252 (28%), Positives = 111/252 (44%), Gaps = 55/252 (21%)

Query: 32  NLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVL 91
            L    AI+TGA+ GIG   A  LA+RGA ++  A +   AE   A       G +    
Sbjct: 25  TLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQA--GLEGRGA 82

Query: 92  PLDLSSLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAISEDGIEMT---------FAT 142
            L+++  ++V   V         LN+L+NNAG       I++D + M            T
Sbjct: 83  VLNVNDATAVDALVESTLKEFGALNVLVNNAG-------ITQDQLAMRMKDDEWDAVIDT 135

Query: 143 NYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDA 202
           N    F L++ +L+ M+   KA    GRIVN++S + S  +G+     GQ      +Y A
Sbjct: 136 NLKAVFRLSRAVLRPMM---KAR--GGRIVNITSVVGS--AGNP----GQ-----VNYAA 179

Query: 203 TRA--YALSK-LANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFF 259
            +A    +++ LA     +E+  R       +TVNCV PG + T +T+     +      
Sbjct: 180 AKAGVAGMTRALA-----REIGSR------GITVNCVAPGFIDTDMTKG----LPQEQ-- 222

Query: 260 LTSKLLKTIPQG 271
             + L   IP G
Sbjct: 223 -QTALKTQIPLG 233

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} Length = 245

 Score =  109 bits (274), Expect = 2e-28
 Identities = 41/218 (18%), Positives = 80/218 (36%), Gaps = 36/218 (16%)

Query: 32  NLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVL 91
           +L    A++TGAT G+G E  + L+ R   +    R+ +                 +  +
Sbjct: 2   SLKKKIAVVTGATGGMGIEIVKDLS-RDHIVYALGRNPEHLAALAEIEG-------VEPI 53

Query: 92  PLDLSSLSSVRNFVSQFHSLNLPLNLLINNAG--KFAHQHAISEDGIEMTFATNYLGHFL 149
             D+         V +  +L+  ++ L++ A   +     A S          N +    
Sbjct: 54  ESDIVKEVLEEGGVDKLKNLD-HVDTLVHAAAVARDTTIEAGSVAEWHAHLDLNVIVPAE 112

Query: 150 LTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALS 209
           L++ LL  +          G ++ ++S      +G+   + G      + Y A++  AL 
Sbjct: 113 LSRQLLPALRAA------SGCVIYINSG-----AGNGP-HPGN-----TIYAASKH-ALR 154

Query: 210 KLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTR 247
            LA+    KE A         + V+ V PG   T + +
Sbjct: 155 GLADAFR-KEEANN------GIRVSTVSPGPTNTPMLQ 185

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 Length = 285

 Score =  109 bits (276), Expect = 3e-28
 Identities = 62/252 (24%), Positives = 118/252 (46%), Gaps = 55/252 (21%)

Query: 32  NLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVL 91
              +  A++TGA  GIG E A++LAK  + ++  +R+ K+ +     + S   G +    
Sbjct: 41  CGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSF--GYESSGY 98

Query: 92  PLDLSSLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAISEDGIEMT---------FAT 142
             D+S    +   +++  + +  +++L+NNAG       I+ D + +            T
Sbjct: 99  AGDVSKKEEISEVINKILTEHKNVDILVNNAG-------ITRDNLFLRMKNDEWEDVLRT 151

Query: 143 NYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDA 202
           N    F +T+ + K+MI   +     GRI+N+SS +    +G++    GQ     ++Y +
Sbjct: 152 NLNSLFYITQPISKRMIN-NRY----GRIINISSIV--GLTGNV----GQ-----ANYSS 195

Query: 203 TRA--YALSK-LANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFF 259
           ++A     +K LA     KELA R      N+TVN + PG + + +T +    I++ +  
Sbjct: 196 SKAGVIGFTKSLA-----KELASR------NITVNAIAPGFISSDMTDK----ISEQI-- 238

Query: 260 LTSKLLKTIPQG 271
               ++  IP G
Sbjct: 239 -KKNIISNIPAG 249

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} Length = 267

 Score =  109 bits (275), Expect = 3e-28
 Identities = 59/238 (24%), Positives = 96/238 (40%), Gaps = 31/238 (13%)

Query: 14  ASGYGSKSTAEQVTDGCPNLSSVTAIITGATSGIGAETARVLAKRGARLVLP-ARSLKAA 72
               G     E +       ++  AI+TGA+ GIGA  A  LA  G  +V+  A    AA
Sbjct: 6   HHSSGVDLGTENLYFQSMMETNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAA 65

Query: 73  EEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLPLNLLINNAG--KFAHQHA 130
           EE   ++ +   G   +    D+S  ++VR   +        +++L+NNAG         
Sbjct: 66  EEVAGKIEAA--GGKALTAQADVSDPAAVRRLFATAEEAFGGVDVLVNNAGIMPLTTIAE 123

Query: 131 ISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYL 190
             +   +   A N  G F   +   +++          GRI+N+S+S         + + 
Sbjct: 124 TGDAVFDRVIAVNLKGTFNTLREAAQRLRV-------GGRIINMSTSQ------VGLLHP 170

Query: 191 GQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRE 248
                    Y A +A  +  + +VL +KEL  R      ++TVN V PG   T L  E
Sbjct: 171 SY-----GIYAAAKA-GVEAMTHVL-SKELRGR------DITVNAVAPGPTATDLFLE 215

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} Length = 271

 Score =  109 bits (275), Expect = 3e-28
 Identities = 63/220 (28%), Positives = 90/220 (40%), Gaps = 41/220 (18%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLS 96
            AIITGA  GIG ET+RVLA+ GAR+VL          A A +     G   V   +DL+
Sbjct: 13  VAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASV-----GRGAVHHVVDLT 67

Query: 97  SLSSVRNFV----SQFHSLNLPLNLLINNAG----KFAHQHAISEDGIEMTFATNYLGHF 148
           +  SVR  +      F      L+++ NNA            ++ D  + TF  N  G  
Sbjct: 68  NEVSVRALIDFTIDTFGR----LDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTM 123

Query: 149 LLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYAL 208
           L+ K  + ++I         G IVN+SS      +     Y               AYA 
Sbjct: 124 LMCKYAIPRLISAGG-----GAIVNISS-----ATA-HAAYDMST-----------AYAC 161

Query: 209 SKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRE 248
           +K A    T+ +A +  +    V  N + PG+VRT     
Sbjct: 162 TKAAIETLTRYVATQYGR--HGVRCNAIAPGLVRTPRLEV 199

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* Length = 248

 Score =  109 bits (274), Expect = 3e-28
 Identities = 70/252 (27%), Positives = 114/252 (45%), Gaps = 54/252 (21%)

Query: 32  NLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVL 91
            L    +++TG+T GIG   A  LA  G+ +++   S + A+     +A+   G     +
Sbjct: 4   KLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANK-YGVKAHGV 62

Query: 92  PLDLSSLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAISEDGIEM---------TFAT 142
            ++L S  S+     + ++L   +++L+NNAG       I+ D + +             
Sbjct: 63  EMNLLSEESINKAFEEIYNLVDGIDILVNNAG-------ITRDKLFLRMSLLDWEEVLKV 115

Query: 143 NYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDA 202
           N  G FL+T+  L+KMI   K     GRIVN+SS +    +G+    +GQ      +Y  
Sbjct: 116 NLTGTFLVTQNSLRKMI---KQR--WGRIVNISSVVGF--TGN----VGQ-----VNYST 159

Query: 203 TRA--YALSK-LANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFF 259
           T+A     +K LA     KELA R      NV VN V PG + T +T      +++ +  
Sbjct: 160 TKAGLIGFTKSLA-----KELAPR------NVLVNAVAPGFIETDMTAV----LSEEI-- 202

Query: 260 LTSKLLKTIPQG 271
              K  + IP G
Sbjct: 203 -KQKYKEQIPLG 213

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 Length = 279

 Score =  109 bits (275), Expect = 3e-28
 Identities = 56/215 (26%), Positives = 96/215 (44%), Gaps = 20/215 (9%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLS 96
            A++TGA+ GIGA  AR L ++G ++V  AR++   EE  A   S      ++    DLS
Sbjct: 34  LALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLS 93

Query: 97  SLSSVRNFVSQFHSLNLPLNLLINNAG--KFAHQHAISEDGIEMTFATNYLGHFLLTKLL 154
           +   + +  S   S +  +++ INNAG  +     + S  G +  F  N L   + T+  
Sbjct: 94  NEEDILSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREA 153

Query: 155 LKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLANV 214
            + M E        G I+N++S      SG  +               T  Y+ +K A  
Sbjct: 154 YQSMKERNVD---DGHIININSM-----SGHRV----------LPLSVTHFYSATKYAVT 195

Query: 215 LHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRER 249
             T+ L Q L++ + ++   C+ PG+V T+   + 
Sbjct: 196 ALTEGLRQELREAQTHIRATCISPGVVETQFAFKL 230

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} Length = 287

 Score =  109 bits (275), Expect = 4e-28
 Identities = 56/224 (25%), Positives = 95/224 (42%), Gaps = 30/224 (13%)

Query: 32  NLSSVTAIITGATSGIGAETARVLAKRG---ARLVLPARSLKAAEEAKARLASDCPGSDI 88
            L+  T +ITGA++GIG  TA    +      +L+L AR L+  EE K  +  + P + +
Sbjct: 30  RLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKV 89

Query: 89  VVLPLDLSSLSSVRNFVSQFHSLNLPLNLLINNAGK---FAHQHAISEDGIEMTFATNYL 145
            V  LD++    ++ F+         +++L+NNAGK         I+ + I+  F TN  
Sbjct: 90  HVAQLDITQAEKIKPFIENLPQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVT 149

Query: 146 GHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRA 205
               +T+ +L             G IVN+ S      +G      G I      Y A++ 
Sbjct: 150 ALINITQAVLPIFQAKNS-----GDIVNLGSI-----AGRDAYPTGSI------YCASKF 193

Query: 206 YALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRER 249
            A+    + L       R + +   + V  + PG+V T  +  R
Sbjct: 194 -AVGAFTDSL-------RKELINTKIRVILIAPGLVETEFSLVR 229

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} Length = 269

 Score =  108 bits (273), Expect = 5e-28
 Identities = 43/220 (19%), Positives = 83/220 (37%), Gaps = 51/220 (23%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLS 96
            AI+TG +SGIG      L + GA++V  +   K+                     +D++
Sbjct: 16  VAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDVNVSDHFK------------IDVT 63

Query: 97  SLSSVRNFVSQ----FHSLNLPLNLLINNAG--KFAHQHAISEDGIEMTFATNYLGHFLL 150
           +   V+  V +    +      +++L+NNAG  +++  H    +        N  G +L+
Sbjct: 64  NEEEVKEAVEKTTKKYGR----IDILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLM 119

Query: 151 TKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSK 210
            K  +  M+         G I+N++S                 +   +      AY  SK
Sbjct: 120 AKYTIPVMLAIGH-----GSIINIAS------------VQSYAATKNAA-----AYVTSK 157

Query: 211 LANVLHTKELAQRLKQME--ANVTVNCVHPGIVRTRLTRE 248
            A +  T+ +A     ++    +  N V PG + T +  +
Sbjct: 158 HALLGLTRSVA-----IDYAPKIRCNAVCPGTIMTPMVIK 192

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} Length = 266

 Score =  108 bits (272), Expect = 7e-28
 Identities = 50/218 (22%), Positives = 86/218 (39%), Gaps = 33/218 (15%)

Query: 37  TAIITGAT-SGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDL 95
             ++T A  +GIG+ TAR     GA +V+     +   E + +LA    G  +  +  D+
Sbjct: 24  VVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLG-RVEAVVCDV 82

Query: 96  SSLSSVRNFVSQFHSLNLPLNLLINNAG--KFAHQHAISEDGIEMTFATNYLGHFLLTKL 153
           +S  +V   ++Q       L++L+NNAG         ++++  +             T+ 
Sbjct: 83  TSTEAVDALITQTVEKAGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRA 142

Query: 154 LLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRA--YALSK- 210
            L+            G IVN  +S+  W          Q S+  SHY A +A   AL++ 
Sbjct: 143 ALRYFRG----VDHGGVIVNN-ASVLGW--------RAQHSQ--SHYAAAKAGVMALTRC 187

Query: 211 LANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRE 248
            A      E  +        V +N V P I R +   +
Sbjct: 188 SA-----IEAVEF------GVRINAVSPSIARHKFLEK 214

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} Length = 255

 Score =  108 bits (272), Expect = 7e-28
 Identities = 56/226 (24%), Positives = 93/226 (41%), Gaps = 39/226 (17%)

Query: 33  LSSVTAIITGATSGIGAETARVLAKRGARLVLP-ARSLKAAEEAKARLASDCPGSDIVVL 91
           L    A++TGA+ GIG   A+ LA  GA + +      + AEE    + S+  G     +
Sbjct: 5   LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSN--GGSAFSI 62

Query: 92  PLDLSSLSSVRNFVSQF------HSLNLPLNLLINNAG--KFAHQHAISEDGIEMTFATN 143
             +L SL  V    S         + +   ++LINNAG    A     +E   +   + N
Sbjct: 63  GANLESLHGVEALYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVN 122

Query: 144 YLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISR-NKSHYDA 202
               F + +  L ++ +         RI+N+SS+              +IS  +   Y  
Sbjct: 123 AKAPFFIIQQALSRLRD-------NSRIINISSA------------ATRISLPDFIAYSM 163

Query: 203 TRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRE 248
           T+  A++ +   L  K+L  R       +TVN + PG V+T +  E
Sbjct: 164 TKG-AINTMTFTL-AKQLGAR------GITVNAILPGFVKTDMNAE 201

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} Length = 264

 Score =  108 bits (272), Expect = 8e-28
 Identities = 51/215 (23%), Positives = 80/215 (37%), Gaps = 30/215 (13%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLS 96
             +ITGA+ GIG   AR L   GA+++L AR     E     +     G   +   LD++
Sbjct: 6   VILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDA--GGTALAQVLDVT 63

Query: 97  SLSSVRNFVSQFHSLNLPLNLLINNAG--KFAHQHAISEDGIEMTFATNYLGHFLLTKLL 154
              SV  F          +++L+NNAG    +   A+  D  E     N  G       +
Sbjct: 64  DRHSVAAFAQAAVDTWGRIDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAV 123

Query: 155 LKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLANV 214
           L  M          G+I+N+ S          +                  Y  +K A  
Sbjct: 124 LPIMEAQRS-----GQIINIGSI-----GALSV------------VPTAAVYCATKFA-- 159

Query: 215 LHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRER 249
              + ++  L+Q   N+ V CV+PG+V + L    
Sbjct: 160 --VRAISDGLRQESTNIRVTCVNPGVVESELAGTI 192

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} Length = 272

 Score =  108 bits (271), Expect = 1e-27
 Identities = 58/238 (24%), Positives = 87/238 (36%), Gaps = 32/238 (13%)

Query: 18  GSKSTAEQVTDGC---PNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEE 74
           GS       + G     +  S T  ITGATSG G   AR  A+ G  LVL  R  +  + 
Sbjct: 1   GSSHHHHHHSSGLVPRGSHMSSTLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQA 60

Query: 75  AKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLPLNLLINNAGK---FAHQHAI 131
               L++    + ++ L LD+   +++   V         L  LINNAG         + 
Sbjct: 61  LAGELSA---KTRVLPLTLDVRDRAAMSAAVDNLPEEFATLRGLINNAGLALGTDPAQSC 117

Query: 132 SEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLG 191
             D  +    TN  G    T+LLL ++I      G    IVN+ S      +G       
Sbjct: 118 DLDDWDTMVDTNIKGLLYSTRLLLPRLIA--HGAGAS--IVNLGSV-----AGK------ 162

Query: 192 QISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRER 249
                   Y  T+A  + + +  L       R       V V  + PG+  +  +  R
Sbjct: 163 WPYPGSHVYGGTKA-FVEQFSLNL-------RCDLQGTGVRVTNLEPGLCESEFSLVR 212

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} Length = 250

 Score =  107 bits (269), Expect = 2e-27
 Identities = 51/249 (20%), Positives = 80/249 (32%), Gaps = 49/249 (19%)

Query: 32  NLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVL 91
           + S     +TGA  GIG  TA    + GA++    ++                       
Sbjct: 4   DFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQE------------QYPFATE 51

Query: 92  PLDLSSLSSVRNFVSQFHSLNLPLNLLINNAG--KFAHQHAISEDGIEMTFATNYLGHFL 149
            +D++  + V     +  +    L+ L+N AG  +      +S++  + TFA N  G F 
Sbjct: 52  VMDVADAAQVAQVCQRLLAETERLDALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFN 111

Query: 150 LTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALS 209
           L +  + +           G IV V+S      +    R  G             AY  S
Sbjct: 112 LFQQTMNQFRRQRG-----GAIVTVAS-----DAAHTPRI-GMS-----------AYGAS 149

Query: 210 KLANVLHTK----ELAQRLKQMEANVTVNCVHPGIVRTRLTR---EREGFITDLVFFLTS 262
           K A          ELA         V  N V PG   T + R     +      +     
Sbjct: 150 KAALKSLALSVGLELAGS------GVRCNVVSPGSTDTDMQRTLWVSDDAEEQRIRGFGE 203

Query: 263 KLLKTIPQG 271
           +    IP G
Sbjct: 204 QFKLGIPLG 212

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A Length = 264

 Score =  107 bits (269), Expect = 2e-27
 Identities = 43/241 (17%), Positives = 77/241 (31%), Gaps = 44/241 (18%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLS 96
             I+TGA+ GIG   A      G++++  +       +                +  D++
Sbjct: 10  VVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPGEAKYDH-------------IECDVT 56

Query: 97  SLSSVRNFVSQFHSLNLPLNLLINNAG--KFAHQHAISEDGIEMTFATNYLGHFLLTKLL 154
           +   V+  +         +++L+NNAG   +    ++S          N  G++  +K  
Sbjct: 57  NPDQVKASIDHIFKEYGSISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFA 116

Query: 155 LKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLANV 214
           +  MI +         IVN+ SS+ +                        AY  SK A +
Sbjct: 117 IPYMIRSRD-----PSIVNI-SSVQASIITK-----NAS-----------AYVTSKHAVI 154

Query: 215 LHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSK----LLKTIPQ 270
             TK +A         +  N V P  + T L R+              K         P 
Sbjct: 155 GLTKSIALDYAP---LLRCNAVCPATIDTPLVRKAAELEVGSDPMRIEKKISEWGHEHPM 211

Query: 271 G 271
            
Sbjct: 212 Q 212

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} Length = 244

 Score =  106 bits (268), Expect = 2e-27
 Identities = 33/244 (13%), Positives = 68/244 (27%), Gaps = 47/244 (19%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLS 96
            A++T A    G      L + G  +V    S   A E +   + +              
Sbjct: 3   IALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESENPGT--------IAL 54

Query: 97  SLSSVRNFVSQFHSLNLPLNLLINNAG-----KFAHQHAISEDGIEMTFATNYLGHFLLT 151
           +       V         ++ +++N               SE  I   F    +   LL 
Sbjct: 55  AEQKPERLVDATLQHGEAIDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLL 114

Query: 152 KLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISR-NKSHYDATRA--YAL 208
           +  +  +            ++ ++SS+            G+        Y   RA   AL
Sbjct: 115 QSAIAPLRAAGG-----ASVIFITSSV------------GKKPLAYNPLYGPARAATVAL 157

Query: 209 SK-LANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSKLLKT 267
            +  A     K L++        + +  + P             +  +    L  ++ + 
Sbjct: 158 VESAA-----KTLSRD------GILLYAIGPNFFNNPTYFPTSDWENNPE--LRERVDRD 204

Query: 268 IPQG 271
           +P G
Sbjct: 205 VPLG 208

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} Length = 247

 Score =  106 bits (268), Expect = 2e-27
 Identities = 63/253 (24%), Positives = 105/253 (41%), Gaps = 56/253 (22%)

Query: 32  NLSSVTAIITGATSGIGAETARVLAKRGARLVL-PARSLKAAEEAKARLASDCPGSDIVV 90
            L   TAI+TG++ G+G   A  L   GA +VL  + +  + +       +   G ++VV
Sbjct: 2   QLKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAA--GINVVV 59

Query: 91  LPLDLSSLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAISEDGIEMT---------FA 141
              D+ +   V N V         +++L+NNAG       I+ D + +            
Sbjct: 60  AKGDVKNPEDVENMVKTAMDAFGRIDILVNNAG-------ITRDTLMLKMSEKDWDDVLN 112

Query: 142 TNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYD 201
           TN    +L TK + K M++  K     G+I+N++S       G+     GQ     ++Y 
Sbjct: 113 TNLKSAYLCTKAVSKIMLK-QK----SGKIINITSIA--GIIGNA----GQ-----ANYA 156

Query: 202 ATRA--YALSK-LANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVF 258
           A++A     +K +A     KE A +       +  N V PGI++T +T      + D V 
Sbjct: 157 ASKAGLIGFTKSIA-----KEFAAK------GIYCNAVAPGIIKTDMTDV----LPDKV- 200

Query: 259 FLTSKLLKTIPQG 271
                 L  IP  
Sbjct: 201 --KEMYLNNIPLK 211

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* Length = 276

 Score =  107 bits (270), Expect = 2e-27
 Identities = 47/234 (20%), Positives = 79/234 (33%), Gaps = 44/234 (18%)

Query: 31  PNLSSVTAIITGATSGIGAETARVLAKRGARLVLP-ARSLKAAEEAKARLASDCPGSDIV 89
                  A+ITG    IG   A  L ++G R+V+    S  AA+   A L +   GS ++
Sbjct: 7   EASECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVL 66

Query: 90  VLPLDLSSLSSVRNFVSQFHSLNL----PLNLLINNAG-------------KFAHQHAIS 132
               DLS  SS+ +        +       ++L+NNA                A      
Sbjct: 67  C-KGDLSLSSSLLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPI 125

Query: 133 EDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQ 192
           +  +   F +N +    L +   ++  E          +VN+     +      +   G 
Sbjct: 126 DAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNL-CDAMT-----DLPLPGF 179

Query: 193 ISRNKSHYDATRA--YALSK-LANVLHTKELAQRLKQMEANVTVNCVHPGIVRT 243
                  Y   +     L++  A      ELA R      ++ VN V PG+   
Sbjct: 180 -----CVYTMAKHALGGLTRAAA-----LELAPR------HIRVNAVAPGLSLL 217

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} Length = 280

 Score =  107 bits (270), Expect = 2e-27
 Identities = 54/225 (24%), Positives = 89/225 (39%), Gaps = 34/225 (15%)

Query: 32  NLSSVTAIITGATSGIGAETARVLAKRGARLVLP-ARSLKAAEEAKARLASDCPGSDIVV 90
             +   AI+TG   GIG   AR LA  G  + +      +      A L+    G+ ++ 
Sbjct: 26  QKARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGL--GARVIF 83

Query: 91  LPLDLSSLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHA----ISEDGIEMTFATNYLG 146
           L  DL+ LSS +  V    +    ++ L+NNAG  +        +  +  +     N  G
Sbjct: 84  LRADLADLSSHQATVDAVVAEFGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRG 143

Query: 147 HFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRA- 205
               T+ +LK M+ +         I+N++S      S  M       S  +  Y  ++A 
Sbjct: 144 TVFFTQAVLKAMLASDARAS--RSIINITSV-----SAVM----T--SPERLDYCMSKAG 190

Query: 206 -YALSK-LANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRE 248
             A S+ LA       LA+        + V  V PGI+R+ +T  
Sbjct: 191 LAAFSQGLA-----LRLAET------GIAVFEVRPGIIRSDMTAA 224

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} Length = 281

 Score =  107 bits (269), Expect = 3e-27
 Identities = 42/223 (18%), Positives = 82/223 (36%), Gaps = 32/223 (14%)

Query: 32  NLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVL 91
                +AI++G   G+G  T R L   G  +V+   + +  +     L     G+    +
Sbjct: 27  QFEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADEL-----GNRAEFV 81

Query: 92  PLDLSSLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAISEDGIEMTFA-------TNY 144
             +++S  SV   +   + L      ++ + G    Q  +  DG                
Sbjct: 82  STNVTSEDSVLAAIEAANQLGRLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYL 141

Query: 145 LGHFLLTKLLLKKMIET-AKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDAT 203
            G + + +L+   +     +  G +G +V  +S   + + G +    GQ           
Sbjct: 142 NGTYNVARLVAASIAAAEPRENGERGALVLTASI--AGYEGQI----GQT---------- 185

Query: 204 RAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLT 246
            AYA +K   +  T   A+ L    A + VN + PG ++T + 
Sbjct: 186 -AYAAAKAGVIGLTIAAARDL--SSAGIRVNTIAPGTMKTPIM 225

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} Length = 269

 Score =  106 bits (266), Expect = 6e-27
 Identities = 60/270 (22%), Positives = 98/270 (36%), Gaps = 55/270 (20%)

Query: 15  SGYGSKSTAEQVTDGCPNLSSVTAIITGATSGIGAETARVLAKRGARLVLP-ARSLKAAE 73
             +   +   Q        +   A +TG   G+GA  +R L   G  + +  +       
Sbjct: 5   HHHHMGTLEAQTQGPGSMQAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVS 64

Query: 74  EAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAISE 133
                      G D     +D++   S      +  +    +++LINNAG       I+ 
Sbjct: 65  TWLMHERDA--GRDFKAYAVDVADFESCERCAEKVLADFGKVDVLINNAG-------ITR 115

Query: 134 DGIEM---------TFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSG 184
           D   M            T+    F +TK  +  M+E        GRIVN+ S      +G
Sbjct: 116 DATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERRF-----GRIVNIGS-----VNG 165

Query: 185 DMIRYLGQISRNKSHYDATRA--YALSK-LANVLHTKELAQRLKQMEANVTVNCVHPGIV 241
               + GQ     ++Y + +A  +  +K LA      E A+R       +TVN V PG +
Sbjct: 166 SRGAF-GQ-----ANYASAKAGIHGFTKTLA-----LETAKR------GITVNTVSPGYL 208

Query: 242 RTRLTREREGFITDLVFFLTSKLLKTIPQG 271
            T +       +   V  L +K+L  IP G
Sbjct: 209 ATAMVEA----VPQDV--LEAKILPQIPVG 232

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* Length = 248

 Score =  105 bits (264), Expect = 7e-27
 Identities = 47/209 (22%), Positives = 88/209 (42%), Gaps = 32/209 (15%)

Query: 38  AIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSS 97
            ++TGAT+G G    R   ++G +++   R  +  +E K  L     G ++ +  LD+ +
Sbjct: 3   VLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDEL-----GDNLYIAQLDVRN 57

Query: 98  LSSVRNFVSQFHSLNLPLNLLINNAGK---FAHQHAISEDGIEMTFATNYLGHFLLTKLL 154
            +++   ++   +    +++L+NNAG        H  S +  E    TN  G   +T+ +
Sbjct: 58  RAAIEEMLASLPAEWCNIDILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAV 117

Query: 155 LKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLANV 214
           L  M+E        G I+N+ S+     +G      G +      Y AT+A  + + +  
Sbjct: 118 LPGMVERNH-----GHIINIGST-----AGSWPYAGGNV------YGATKA-FVRQFSLN 160

Query: 215 LHTKELAQRLKQMEANVTVNCVHPGIVRT 243
           L       R       V V  + PG+V  
Sbjct: 161 L-------RTDLHGTAVRVTDIEPGLVGG 182

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} Length = 246

 Score =  105 bits (264), Expect = 8e-27
 Identities = 72/248 (29%), Positives = 118/248 (47%), Gaps = 56/248 (22%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLP-ARSLKAAEEAKARLASDCPGSDIVVLPLDL 95
            A++TGA+ GIG   A  LAK+GA +V+  A + + A E    +     GSD + +  D+
Sbjct: 6   VALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKL--GSDAIAVRADV 63

Query: 96  SSLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAISEDGIEMT---------FATNYLG 146
           ++   V N V Q   +   +++L+NNAG       +++D + M            TN  G
Sbjct: 64  ANAEDVTNMVKQTVDVFGQVDILVNNAG-------VTKDNLLMRMKEEEWDTVINTNLKG 116

Query: 147 HFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRA- 205
            FL TK + + M+   +     GRIVN++S +    +G+     GQ     ++Y A +A 
Sbjct: 117 VFLCTKAVSRFMM---RQR--HGRIVNIASVV--GVTGNP----GQ-----ANYVAAKAG 160

Query: 206 -YALSK-LANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSK 263
              L+K  A     KELA R      N+TVN + PG + T +T      + + +    ++
Sbjct: 161 VIGLTKTSA-----KELASR------NITVNAIAPGFIATDMTDV----LDENI---KAE 202

Query: 264 LLKTIPQG 271
           +LK IP  
Sbjct: 203 MLKLIPAA 210

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} Length = 264

 Score =  105 bits (264), Expect = 1e-26
 Identities = 47/253 (18%), Positives = 79/253 (31%), Gaps = 52/253 (20%)

Query: 32  NLSSVTAIITGATSGIGAETARVLAKRGARLVLPARS-LKAAEEAKARLASDCPGSDIVV 90
                 A+IT  T G+G +    L  +G  + +   S   A E  K           +  
Sbjct: 4   GRFVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDV--EERLQF 61

Query: 91  LPLDLSSLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAISEDG--IEMT-------FA 141
           +  D++    +   V +  S    ++ LINNAG       + E    ++           
Sbjct: 62  VQADVTKKEDLHKIVEEAMSHFGKIDFLINNAGP-----YVFERKKLVDYEEDEWNEMIQ 116

Query: 142 TNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYD 201
            N    F L KL++  M +        GRI+N          G +     +     S + 
Sbjct: 117 GNLTAVFHLLKLVVPVMRKQNF-----GRIINYGFQGADSAPGWI----YR-----SAFA 162

Query: 202 ATRA--YALSK-LANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVF 258
           A +    +L+K +A      E A+        +T N V PG +   +             
Sbjct: 163 AAKVGLVSLTKTVA-----YEEAEY------GITANMVCPGDIIGEMKEA----TIQEA- 206

Query: 259 FLTSKLLKTIPQG 271
                     P G
Sbjct: 207 --RQLKEHNTPIG 217

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* Length = 247

 Score =  104 bits (263), Expect = 1e-26
 Identities = 58/217 (26%), Positives = 91/217 (41%), Gaps = 29/217 (13%)

Query: 32  NLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVL 91
            L    A+ITGA+SGIG  TAR LA  GA + + AR ++        L +   G+ + VL
Sbjct: 4   ALQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAA--GAKVHVL 61

Query: 92  PLDLSSLSSVRNFVSQFHSLNLPLNLLINNAG--KFAHQHAISEDGIEMTFATNYLGHFL 149
            LD++    V   V+        L++L+NNAG                    TN LG   
Sbjct: 62  ELDVADRQGVDAAVASTVEALGGLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMY 121

Query: 150 LTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALS 209
           +T+  L  ++ +      +G +V +SS      +G          RN + Y AT+   ++
Sbjct: 122 MTRAALPHLLRS------KGTVVQMSSI-----AGR------VNVRNAAVYQATKF-GVN 163

Query: 210 KLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLT 246
             +  L  +E+ +R       V V  + PG   T L 
Sbjct: 164 AFSETLR-QEVTER------GVRVVVIEPGTTDTELR 193

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} Length = 256

 Score =  104 bits (262), Expect = 2e-26
 Identities = 58/253 (22%), Positives = 98/253 (38%), Gaps = 56/253 (22%)

Query: 32  NLSSVTAIITGATSGIGAETARVLAKRGARLVL-PARSLKAAEEAKARLASDCPGSDIVV 90
            +S   A +TG   GIG    + L K G R+V     +     +      +   G D   
Sbjct: 10  VMSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKAL--GFDFYA 67

Query: 91  LPLDLSSLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAISEDGIEMT---------FA 141
              ++    S +    +  +    +++L+NNAG       I+ D +              
Sbjct: 68  SEGNVGDWDSTKQAFDKVKAEVGEIDVLVNNAG-------ITRDVVFRKMTREDWQAVID 120

Query: 142 TNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYD 201
           TN    F +TK ++  M+E        GRI+N+SS      +G   ++ GQ     ++Y 
Sbjct: 121 TNLTSLFNVTKQVIDGMVE-RGW----GRIINISS-----VNGQKGQF-GQ-----TNYS 164

Query: 202 ATRA--YALSK-LANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVF 258
             +A  +  +  LA     +E+A +       VTVN V PG + T + +     I   V 
Sbjct: 165 TAKAGIHGFTMSLA-----QEVATK------GVTVNTVSPGYIGTDMVKA----IRPDV- 208

Query: 259 FLTSKLLKTIPQG 271
               K++ TIP  
Sbjct: 209 --LEKIVATIPVR 219

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* Length = 254

 Score =  104 bits (261), Expect = 2e-26
 Identities = 37/249 (14%), Positives = 74/249 (29%), Gaps = 56/249 (22%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLS 96
           TAI+T      G  +A  L++ G  +     S K  +E +A   +           L   
Sbjct: 3   TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAET--------YPQLKPM 54

Query: 97  SLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAISEDG---IEMT-------FATNYLG 146
           S       +    S    +++L++N          + +     +              + 
Sbjct: 55  SEQEPAELIEAVTSAYGQVDVLVSNDI-------FAPEFQPIDKYAVEDYRGAVEALQIR 107

Query: 147 HFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRA- 205
            F L   +  +M +  K+    G I+ ++S            +        S Y + RA 
Sbjct: 108 PFALVNAVASQMKK-RKS----GHIIFITS---------ATPFGPWKEL--STYTSARAG 151

Query: 206 -YALSK-LANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRE-REGFITDLVFFLTS 262
              L+  L+     KEL +       N+ V  + P  + +  +                +
Sbjct: 152 ACTLANALS-----KELGEY------NIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVA 200

Query: 263 KLLKTIPQG 271
            + K     
Sbjct: 201 HVKKVTALQ 209

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* Length = 265

 Score =  104 bits (262), Expect = 2e-26
 Identities = 52/224 (23%), Positives = 90/224 (40%), Gaps = 33/224 (14%)

Query: 32  NLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVL 91
           ++  + A+ITG  SG+G  TA  L  +GA  VL        E    +L     G++ V  
Sbjct: 9   SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKL-----GNNCVFA 63

Query: 92  PLDLSSLSSVRNFVSQFHSLNLPLNLLINNAG--------KFAHQHAISEDGIEMTFATN 143
           P D++S   V+  ++        +++ +N AG                + +  +     N
Sbjct: 64  PADVTSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVN 123

Query: 144 YLGHFLLTKLLLKKMIETAK-ATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDA 202
            +G F + +L+  +M +      G +G I+N +S   + F G +    GQ          
Sbjct: 124 LMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASV--AAFEGQV----GQA--------- 168

Query: 203 TRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLT 246
             AY+ SK   V  T  +A+ L      + V  + PG+  T L 
Sbjct: 169 --AYSASKGGIVGMTLPIARDL--APIGIRVMTIAPGLFGTPLL 208

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} Length = 279

 Score =  104 bits (262), Expect = 2e-26
 Identities = 47/240 (19%), Positives = 87/240 (36%), Gaps = 38/240 (15%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLS 96
            A +TG++ GIG   A   A+ GA + +   S  A E+A+    +   G        ++S
Sbjct: 36  VASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTY--GVHSKAYKCNIS 93

Query: 97  SLSSVRNFVSQFHSLNLPLNLLINNAG----KFAHQHAISEDGIEMTFATNYLGHFLLTK 152
              SV   +SQ       +++ + NAG    +       + D      + +  G +  + 
Sbjct: 94  DPKSVEETISQQEKDFGTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSH 153

Query: 153 LLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLA 212
            + K   +  K     G ++  SS         +   +  I + ++ Y+       +K A
Sbjct: 154 NIGKIFKKNGK-----GSLIITSS---------ISGKIVNIPQLQAPYNT------AK-A 192

Query: 213 NVLH-TKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSKLLKTIPQG 271
              H  K LA    +      VN + PG + T +T             + +K  +  P G
Sbjct: 193 ACTHLAKSLA---IEWAPFARVNTISPGYIDTDITDF-------ASKDMKAKWWQLTPLG 242

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G Length = 244

 Score =  103 bits (260), Expect = 2e-26
 Identities = 66/248 (26%), Positives = 110/248 (44%), Gaps = 56/248 (22%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLP-ARSLKAAEEAKARLASDCPGSDIVVLPLDL 95
             ++TGA+ GIG   A  L K G ++++  ARS KAAEE   ++ +   G   +    D+
Sbjct: 3   VVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAY--GGQAITFGGDV 60

Query: 96  SSLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAISEDGIEMT---------FATNYLG 146
           S  + V   +         +++++NNAG       I+ D + +             N  G
Sbjct: 61  SKEADVEAMMKTAIDAWGTIDVVVNNAG-------ITRDTLLIRMKKSQWDEVIDLNLTG 113

Query: 147 HFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRA- 205
            FL T+   K M+   K    +GRI+N++S +     G++    GQ     ++Y A +A 
Sbjct: 114 VFLCTQAATKIMM---KKR--KGRIINIASVV--GLIGNI----GQ-----ANYAAAKAG 157

Query: 206 -YALSK-LANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSK 263
               SK  A     +E A R      N+ VN V PG + + +T +    + + +     K
Sbjct: 158 VIGFSKTAA-----REGASR------NINVNVVCPGFIASDMTAK----LGEDM---EKK 199

Query: 264 LLKTIPQG 271
           +L TIP G
Sbjct: 200 ILGTIPLG 207

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} Length = 294

 Score =  104 bits (263), Expect = 2e-26
 Identities = 55/215 (25%), Positives = 91/215 (42%), Gaps = 33/215 (15%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLP--ARSLKAAEEAKARLASDCPGSDIVVLPLD 94
            A++TG  SGIG   A   A+ GA + +       + A++ KA +     G   V+LP D
Sbjct: 51  KALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEEC--GRKAVLLPGD 108

Query: 95  LSSLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQ---HAISEDGIEMTFATNYLGHFLLT 151
           LS  S  R+ V +       L++L   AGK         ++ +  + TFA N    F +T
Sbjct: 109 LSDESFARSLVHKAREALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWIT 168

Query: 152 KLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKL 211
           +  +  + +          I+   SSI +        Y      +    D    YA +K 
Sbjct: 169 QEAIPLLPK-------GASIITT-SSIQA--------YQP----SPHLLD----YAATKA 204

Query: 212 ANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLT 246
           A + +++ LA+++   E  + VN V PG + T L 
Sbjct: 205 AILNYSRGLAKQV--AEKGIRVNIVAPGPIWTALQ 237

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} PDB: 3sj7_A* Length = 246

 Score =  103 bits (260), Expect = 3e-26
 Identities = 63/248 (25%), Positives = 108/248 (43%), Gaps = 56/248 (22%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVL-PARSLKAAEEAKARLASDCPGSDIVVLPLDL 95
           +A++TGA+ GIG   A  LA+ G  + +  A S + AE     + +   G D   +  ++
Sbjct: 6   SALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAK--GVDSFAIQANV 63

Query: 96  SSLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAISEDGIEMT---------FATNYLG 146
           +    V+  + +  S    L++L+NNAG       I+ D + M            TN  G
Sbjct: 64  ADADEVKAMIKEVVSQFGSLDVLVNNAG-------ITRDNLLMRMKEQEWDDVIDTNLKG 116

Query: 147 HFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRA- 205
            F   +    +M+   +     G I+N+SS + +   G+     GQ     ++Y AT+A 
Sbjct: 117 VFNCIQKATPQML---RQR--SGAIINLSSVVGA--VGNP----GQ-----ANYVATKAG 160

Query: 206 -YALSK-LANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSK 263
              L+K  A     +ELA R       +TVN V PG + + +T      ++D +     +
Sbjct: 161 VIGLTKSAA-----RELASR------GITVNAVAPGFIVSDMTDA----LSDEL---KEQ 202

Query: 264 LLKTIPQG 271
           +L  IP  
Sbjct: 203 MLTQIPLA 210

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} Length = 287

 Score =  104 bits (261), Expect = 3e-26
 Identities = 38/232 (16%), Positives = 75/232 (32%), Gaps = 45/232 (19%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVL------------PARSLKAAEEAKARLASDCP 84
             ++TG   G G   A  LA+ GA ++L            P  + +  EEA   +     
Sbjct: 12  VVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKT-- 69

Query: 85  GSDIVVLPLDLSSLSSVRNFV----SQFHSLNLPLNLLINNAGKFAHQHAISEDGIEMTF 140
           G       +D+   ++V   +    ++F      L++++ NAG       +        F
Sbjct: 70  GRKAYTAEVDVRDRAAVSRELANAVAEFGK----LDVVVANAGICPLGAHLPVQAFADAF 125

Query: 141 ATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHY 200
             +++G        L  +            I+   S      +G +       +      
Sbjct: 126 DVDFVGVINTVHAALPYLTS-------GASIITTGSV-----AGLIAAAQPPGAGGPQGP 173

Query: 201 DATRAYALSKLANVLHTK----ELAQRLKQMEANVTVNCVHPGIVRTRLTRE 248
                Y+ +K     +T     +LA +      ++  N +HP  V T +   
Sbjct: 174 GGA-GYSYAKQLVDSYTLQLAAQLAPQ------SIRANVIHPTNVNTDMLNS 218

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} Length = 257

 Score =  103 bits (259), Expect = 4e-26
 Identities = 58/222 (26%), Positives = 90/222 (40%), Gaps = 31/222 (13%)

Query: 32  NLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVL 91
            L S   I+TGA+SG+GA   R+LA+ GA ++       A EE  A L     G+ +   
Sbjct: 4   QLKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAEL-----GAAVRFR 58

Query: 92  PLDLSSLSSVRNFVSQFHSLNLPLNLLINNAG------KFAHQHAISEDGIEMTFATNYL 145
             D+++ +     ++        ++ L+N AG              + D    T A N +
Sbjct: 59  NADVTNEADATAALAFAKQEFGHVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLI 118

Query: 146 GHFLLTKLLLKKMIET-AKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATR 204
           G F + +L  + M +    A G +G IVN +S   + F G +    GQ            
Sbjct: 119 GTFNMIRLAAEVMSQGEPDADGERGVIVNTASI--AAFDGQI----GQA----------- 161

Query: 205 AYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLT 246
           AYA SK      T   A+ L      + V  + PGI  T + 
Sbjct: 162 AYAASKGGVAALTLPAAREL--ARFGIRVVTIAPGIFDTPMM 201

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* Length = 257

 Score =  103 bits (258), Expect = 5e-26
 Identities = 42/223 (18%), Positives = 72/223 (32%), Gaps = 41/223 (18%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLS 96
             +I+G  +GIGA T +VL   G ++V          E  A L++               
Sbjct: 3   IIVISGCATGIGAATRKVLEAAGHQIVGIDIR---DAEVIADLST------------AEG 47

Query: 97  SLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLK 156
              ++ + +++       ++ L+  AG            +    + NY G   L    L 
Sbjct: 48  RKQAIADVLAKCSK---GMDGLVLCAG-----LGPQTKVLGNVVSVNYFGATELMDAFLP 99

Query: 157 KMIETAKATGIQGRIVNVSS-----------SIHSWFSGDMIRYLGQISRNKSHYDATRA 205
            + +       Q   V +SS            +              I  +        A
Sbjct: 100 ALKKGH-----QPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQGGNLA 154

Query: 206 YALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRE 248
           YA SK A  +  ++ A      EA V +N + PG   T L + 
Sbjct: 155 YAGSKNALTVAVRKRAAAW--GEAGVRLNTIAPGATETPLLQA 195

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* Length = 278

 Score =  103 bits (259), Expect = 7e-26
 Identities = 52/220 (23%), Positives = 85/220 (38%), Gaps = 38/220 (17%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLS 96
            AIITG   GIG  TA++  + GA++V+   +    ++    + S      I  +  D++
Sbjct: 18  VAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGS---PDVISFVHCDVT 74

Query: 97  SLSSVRNFV----SQFHSLNLPLNLLINNAGKFAHQ----HAISEDGIEMTFATNYLGHF 148
               VRN V    ++       L+++  N G  +           +  +     N  G F
Sbjct: 75  KDEDVRNLVDTTIAKHGK----LDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAF 130

Query: 149 LLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYAL 208
           L+ K   + MI   K     G IV   +SI S+ +G                  +  Y  
Sbjct: 131 LVAKHAARVMIPAKK-----GSIVFT-ASISSFTAG---------------EGVSHVYTA 169

Query: 209 SKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRE 248
           +K A +  T  L   L +    + VNCV P IV + L  +
Sbjct: 170 TKHAVLGLTTSLCTELGE--YGIRVNCVSPYIVASPLLTD 207

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} Length = 245

 Score =  102 bits (257), Expect = 8e-26
 Identities = 68/248 (27%), Positives = 102/248 (41%), Gaps = 55/248 (22%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVL-PARSLKAAEEAKARLASDCPGSDIVVLPLDL 95
            A+ITGA+ GIG   A  LA+ G  L +   ++ + AEE             + VL  +L
Sbjct: 3   KALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRG-SPLVAVLGANL 61

Query: 96  SSLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAISEDGIEMT---------FATNYLG 146
               +    V Q   +   L+ L+NNAG       I+ D + +             N   
Sbjct: 62  LEAEAATALVHQAAEVLGGLDTLVNNAG-------ITRDTLLVRMKDEDWEAVLEANLSA 114

Query: 147 HFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRA- 205
            F  T+  +K M+   KA    GRIVN++S +     G+     GQ     ++Y A++A 
Sbjct: 115 VFRTTREAVKLMM---KAR--FGRIVNITSVVGI--LGNP----GQ-----ANYVASKAG 158

Query: 206 -YALSK-LANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSK 263
               ++ +A     KE AQR       +TVN V PG + T +T      +   V      
Sbjct: 159 LIGFTRAVA-----KEYAQR------GITVNAVAPGFIETEMTER----LPQEV---KEA 200

Query: 264 LLKTIPQG 271
            LK IP G
Sbjct: 201 YLKQIPAG 208

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 Length = 267

 Score =  102 bits (257), Expect = 9e-26
 Identities = 53/249 (21%), Positives = 89/249 (35%), Gaps = 45/249 (18%)

Query: 32  NLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVL 91
           +L    A++TG + G+G   A+ LA+ G  +V+ +R+L+ A EA  +L     G + +  
Sbjct: 18  DLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKY-GVETMAF 76

Query: 92  PLDLSSLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAI--SEDGIEMTFATNYLGHFL 149
             D+S+   V+  +         L+ ++N AG      A     D        N  G + 
Sbjct: 77  RCDVSNYEEVKKLLEAVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYY 136

Query: 150 LTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALS 209
           + +     + E+         I+N+  S+                          AYA S
Sbjct: 137 VCREAFSLLRESDN-----PSIINI-GSLTVEEVT----MPNIS-----------AYAAS 175

Query: 210 KLANVLHTK----ELAQRLKQMEANVTVNCVHPGIVRTRLT---REREGFITDLVFFLTS 262
           K      TK    E  +        + VN + PG  RT++T                   
Sbjct: 176 KGGVASLTKALAKEWGRY------GIRVNVIAPGWYRTKMTEAVFSDPEK--------LD 221

Query: 263 KLLKTIPQG 271
            +LK IP G
Sbjct: 222 YMLKRIPLG 230

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* Length = 269

 Score =  102 bits (257), Expect = 1e-25
 Identities = 74/254 (29%), Positives = 114/254 (44%), Gaps = 61/254 (24%)

Query: 32  NLSSVTAIITGATSGIGAETARVLAKRGARLVLP-ARSLKAAEEAKARLASDCPGSDIVV 90
            L+   A++TGA+ GIG   A  LA  GA++ +  A S  AA+E  A +A+   G +   
Sbjct: 25  PLTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAA--GGEAFA 82

Query: 91  LPLDLSSLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAISEDGIEMT---------FA 141
           +  D+S  S V    +        L++L+NNAG       I+ D + +            
Sbjct: 83  VKADVSQESEVEALFAAVIERWGRLDVLVNNAG-------ITRDTLLLRMKRDDWQSVLD 135

Query: 142 TNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYD 201
            N  G FL ++   K M++  +     GRI+N++S +     G+     GQ     ++Y 
Sbjct: 136 LNLGGVFLCSRAAAKIMLK-QR----SGRIINIASVVGE--MGNP----GQ-----ANYS 179

Query: 202 ATRA--YALSK-LANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVF 258
           A +A    L+K +A     KELA R       +TVN V PG + T +T E          
Sbjct: 180 AAKAGVIGLTKTVA-----KELASR------GITVNAVAPGFIATDMTSE---------- 218

Query: 259 FLTS-KLLKTIPQG 271
            L + KLL+ IP G
Sbjct: 219 -LAAEKLLEVIPLG 231

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} Length = 285

 Score =  102 bits (257), Expect = 1e-25
 Identities = 38/228 (16%), Positives = 80/228 (35%), Gaps = 31/228 (13%)

Query: 32  NLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCP-----GS 86
           +L   T  I+G + GIG   A+ +A  GA + L A+S +   +    + +        G 
Sbjct: 6   SLRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGG 65

Query: 87  DIVVLPLDLSSLSSVRNFVSQFHSLNLPLNLLINNAG--KFAHQHAISEDGIEMTFATNY 144
             + +  D+    +V   V++       +++ +NNA          +     ++      
Sbjct: 66  QALPIVGDIRDGDAVAAAVAKTVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQV 125

Query: 145 LGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATR 204
            G + +++  +  M            I+ +S  I         ++L              
Sbjct: 126 RGTYAVSQSCIPHMKGRD-----NPHILTLSPPI-----RLEPKWLRPT----------- 164

Query: 205 AYALSKLANVLHTKELAQRLKQMEANVTVNCVHPG-IVRTRLTREREG 251
            Y ++K    L    +A+ L+  +A +  N + P   V T   +   G
Sbjct: 165 PYMMAKYGMTLCALGIAEELR--DAGIASNTLWPRTTVATAAVQNLLG 210

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A Length = 247

 Score =  101 bits (254), Expect = 2e-25
 Identities = 53/262 (20%), Positives = 96/262 (36%), Gaps = 66/262 (25%)

Query: 22  TAEQVTDGCPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLAS 81
           TA       P   S + ++TG   GIG   A+ LA  G ++ +  R   A +        
Sbjct: 2   TATATEGAKPPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGLFG---- 57

Query: 82  DCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAISEDGIEMT-- 139
                    + +D++   +V    +       P+ +L++NAG       +S D   M   
Sbjct: 58  ---------VEVDVTDSDAVDRAFTAVEEHQGPVEVLVSNAG-------LSADAFLMRMT 101

Query: 140 -------FATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQ 192
                     N  G F + +   + M    +     GR++ + S       G       Q
Sbjct: 102 EEKFEKVINANLTGAFRVAQRASRSMQ---RNKF--GRMIFIGSVSG--LWGIG----NQ 150

Query: 193 ISRNKSHYDATRA--YALSK-LANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRER 249
                ++Y A++A    +++ +A     +EL++       NVT N V PG + T +TR  
Sbjct: 151 -----ANYAASKAGVIGMARSIA-----RELSKA------NVTANVVAPGYIDTDMTRA- 193

Query: 250 EGFITDLVFFLTSKLLKTIPQG 271
              + + +       L+ IP  
Sbjct: 194 ---LDERI---QQGALQFIPAK 209

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} Length = 274

 Score =  101 bits (254), Expect = 3e-25
 Identities = 47/253 (18%), Positives = 83/253 (32%), Gaps = 46/253 (18%)

Query: 32  NLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCP-----GS 86
            LS  T  ITGA+ GIG   A   A+ GA + + A+S  A  +    + S        G 
Sbjct: 3   TLSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGG 62

Query: 87  DIVVLPLDLSSLSSVRNFVSQFHSLNLPLNLLINNAG--KFAHQHAISEDGIEMTFATNY 144
             + L  D+     VR  V+        +++L+NNA                ++    N 
Sbjct: 63  QGLALKCDIREEDQVRAAVAATVDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNA 122

Query: 145 LGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIH---SWFSGDMIRYLGQISRNKSHYD 201
            G F+  +  L  +++          I+ ++       +W+                   
Sbjct: 123 RGSFVCAQACLPHLLQAP-----NPHILTLAPPPSLNPAWWGAHT--------------- 162

Query: 202 ATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPG-IVRTRLTREREGF-------- 252
               Y L+K+   L T  LA         V +N + P  ++ T       G         
Sbjct: 163 ---GYTLAKMGMSLVTLGLAAEFG--PQGVAINALWPRTVIATDAINMLPGVDAAACRRP 217

Query: 253 --ITDLVFFLTSK 263
             + D    + ++
Sbjct: 218 EIMADAAHAVLTR 230

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} Length = 273

 Score =  101 bits (253), Expect = 5e-25
 Identities = 61/241 (25%), Positives = 93/241 (38%), Gaps = 43/241 (17%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLS 96
           TA++TGA SGIG   A   A+ GA ++   R+    +E    +A    G     +  DL+
Sbjct: 33  TAVVTGAGSGIGRAIAHGYARAGAHVLAWGRT-DGVKEVADEIADG--GGSAEAVVADLA 89

Query: 97  SLSSVRNFVSQFHSLNLPLNLLINNAG--KFAHQHAISEDGIEMTFATNYLGHFLLTKLL 154
            L    N   +  +    +++L+NNAG    A    +S          N    ++L++  
Sbjct: 90  DLEGAANVAEELAATR-RVDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSF 148

Query: 155 LKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLANV 214
              M+         GRIV ++S         M+ + G  +          AYA SK A V
Sbjct: 149 GTAMLAHGS-----GRIVTIAS---------MLSFQGGRNVA--------AYAASKHAVV 186

Query: 215 LHTK----ELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSKLLKTIPQ 270
             T+    E A R       V VN + PG V T  T        D      +++   IP 
Sbjct: 187 GLTRALASEWAGR------GVGVNALAPGYVVTANT---AALRADDER--AAEITARIPA 235

Query: 271 G 271
           G
Sbjct: 236 G 236

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} Length = 346

 Score =  102 bits (255), Expect = 6e-25
 Identities = 42/242 (17%), Positives = 86/242 (35%), Gaps = 37/242 (15%)

Query: 21  STAEQVTDGCPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLA 80
                +      L+  T  ITGA+ GIG   A   AK GA +V+ A++ +   +    + 
Sbjct: 31  GRGSAMLPNTGRLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIY 90

Query: 81  S-----DCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLPLNLLINNAG--KFAHQHAISE 133
           +     +  G   +   +D+     +   V +       +++L+NNA      +      
Sbjct: 91  TAAEEIEAVGGKALPCIVDVRDEQQISAAVEKAIKKFGGIDILVNNASAISLTNTLDTPT 150

Query: 134 DGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHS---WFSGDMIRYL 190
             +++    N  G +L +K  +  + ++         I+N+S  ++    WF        
Sbjct: 151 KRLDLMMNVNTRGTYLASKACIPYLKKSKV-----AHILNISPPLNLNPVWFKQHC---- 201

Query: 191 GQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPG-IVRTRLTRER 249
                         AY ++K    ++   +A+  K     + VN + P   + T      
Sbjct: 202 --------------AYTIAKYGMSMYVLGMAEEFK---GEIAVNALWPKTAIHTAAMDML 244

Query: 250 EG 251
            G
Sbjct: 245 GG 246

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A Length = 239

 Score = 99.1 bits (248), Expect = 1e-24
 Identities = 46/247 (18%), Positives = 83/247 (33%), Gaps = 60/247 (24%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLS 96
            A++TG + GIG   A  L  RG R+ + +R+ + A ++   +           LP DL 
Sbjct: 4   KALVTGGSRGIGRAIAEALVARGYRVAIASRNPEEAAQSLGAVP----------LPTDLE 53

Query: 97  SLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAISEDG--IEMT-------FATNYLGH 147
                +  V +       L++L++ A        ++     +E++          +    
Sbjct: 54  K-DDPKGLVKRALEALGGLHVLVHAAA-------VNVRKPALELSYEEWRRVLYLHLDVA 105

Query: 148 FLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRA-- 205
           FLL +     M E        GR++ + S         +  +          Y   +   
Sbjct: 106 FLLAQAAAPHMAEAGW-----GRVLFIGS---------VTTFTAGGPVPIPAYTTAKTAL 151

Query: 206 YALSK-LANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSKL 264
             L++ LA      E A+        + VN + PG V T  T        +        +
Sbjct: 152 LGLTRALAK-----EWARL------GIRVNLLCPGYVETEFT---LPLRQNPEL--YEPI 195

Query: 265 LKTIPQG 271
              IP G
Sbjct: 196 TARIPMG 202

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... Length = 288

 Score =  100 bits (250), Expect = 1e-24
 Identities = 52/252 (20%), Positives = 88/252 (34%), Gaps = 45/252 (17%)

Query: 13  GASGYGSKSTAEQVTDGCPNLSSVTAIITGATSGIGAETARVLAKRGARLVLP-ARSLKA 71
           G+S +    ++  V  G  ++ +  A++TGA   IG   A  L + G R+V+    S +A
Sbjct: 2   GSSHHHHHHSSGLVPRG-SHMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEA 60

Query: 72  AEEAKARLASDCPGSDIVVLPLDLSS----LSSVRNFVSQFHSLNLPLNLLINNAGKFAH 127
           A      L  +   + +V    DL++     +S    ++         ++L+NNA  F  
Sbjct: 61  AVSLADELNKERSNTAVVC-QADLTNSNVLPASCEEIINSCFRAFGRCDVLVNNASAFYP 119

Query: 128 QHAI---SEDGIEMT---------FATNYLGHFLLTKLLLKKMIETAKAT-GIQGRIVNV 174
              +    ED                TN +  FLLT    ++   T          IVN+
Sbjct: 120 TPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNL 179

Query: 175 SSSIHSWFSGDMIRYLGQISRNKSHYDATRA--YALSK-LANVLHTKELAQRLKQMEANV 231
                          +       S Y+  +     L++  A      ELA         +
Sbjct: 180 -CDAMVD-----QPCMAF-----SLYNMGKHALVGLTQSAA-----LELAPY------GI 217

Query: 232 TVNCVHPGIVRT 243
            VN V PG+   
Sbjct: 218 RVNGVAPGVSLL 229

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} Length = 253

 Score = 99.2 bits (248), Expect = 2e-24
 Identities = 60/252 (23%), Positives = 102/252 (40%), Gaps = 66/252 (26%)

Query: 32  NLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVL 91
           +  S + ++TG   GIG   AR  A  G ++ +  RS +  E   A             +
Sbjct: 18  SHMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPEGFLA-------------V 64

Query: 92  PLDLSSLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAISEDGIEM---------TFAT 142
             D++    V     +    + P+ +LI NAG       +++D + M            T
Sbjct: 65  KCDITDTEQVEQAYKEIEETHGPVEVLIANAG-------VTKDQLLMRMSEEDFTSVVET 117

Query: 143 NYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDA 202
           N  G F + K   + M+   +A   +GR+V +SS +    S       GQ     ++Y A
Sbjct: 118 NLTGTFRVVKRANRAML---RAK--KGRVVLISSVVGLLGSA------GQ-----ANYAA 161

Query: 203 TRA--YALSK-LANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFF 259
           ++A     ++ LA     +EL  R      N+T N V PG V T +T+     +TD    
Sbjct: 162 SKAGLVGFARSLA-----RELGSR------NITFNVVAPGFVDTDMTKV----LTDEQ-- 204

Query: 260 LTSKLLKTIPQG 271
             + ++  +P G
Sbjct: 205 -RANIVSQVPLG 215

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 245

 Score = 98.7 bits (247), Expect = 2e-24
 Identities = 60/252 (23%), Positives = 99/252 (39%), Gaps = 61/252 (24%)

Query: 32  NLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVL 91
            L     +ITGA  GIG  T  + AK GARLV          EA   + +         +
Sbjct: 2   RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGA-------HPV 54

Query: 92  PLDLSSLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAISEDG--IEMT-------FAT 142
            +D++  +SV    ++  +    L+ +++ AG       I+ D    +M           
Sbjct: 55  VMDVADPASVERGFAEALAHLGRLDGVVHYAG-------ITRDNFHWKMPLEDWELVLRV 107

Query: 143 NYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDA 202
           N  G FL+ K   + M E        G IV  +S ++    G++    GQ     ++Y A
Sbjct: 108 NLTGSFLVAKAASEAMRE-KNP----GSIVLTASRVY---LGNL----GQ-----ANYAA 150

Query: 203 TRA--YALSK-LANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFF 259
           + A    L++ LA      EL +        + VN + PG + TR+T +    + + V  
Sbjct: 151 SMAGVVGLTRTLA-----LELGRW------GIRVNTLAPGFIETRMTAK----VPEKV-- 193

Query: 260 LTSKLLKTIPQG 271
              K +   P G
Sbjct: 194 -REKAIAATPLG 204

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} Length = 266

 Score = 98.8 bits (247), Expect = 3e-24
 Identities = 47/217 (21%), Positives = 83/217 (38%), Gaps = 34/217 (15%)

Query: 32  NLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVL 91
                  +ITGA+SGIG   AR  ++ G  L+L AR      E    L       + +  
Sbjct: 13  GSMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARR----VERLKALN----LPNTLCA 64

Query: 92  PLDLSSLSSVRNFVSQFHSLNLPLNLLINNAG--KFAHQHAISEDGIEMTFATNYLGHFL 149
            +D++   +    +++   +  P + ++NNAG            +  +  F  N LG   
Sbjct: 65  QVDVTDKYTFDTAITRAEKIYGPADAIVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLN 124

Query: 150 LTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALS 209
             + +L  M          G I+N+SS      +G    +        + Y  T+  A+ 
Sbjct: 125 GMQAVLAPMKARNC-----GTIINISSI-----AGKKT-FPDH-----AAYCGTKF-AVH 167

Query: 210 KLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLT 246
            ++  +  +E+A        NV V  + P  V+T L 
Sbjct: 168 AISENVR-EEVAAS------NVRVMTIAPSAVKTELL 197

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 Length = 249

 Score = 98.0 bits (245), Expect = 4e-24
 Identities = 45/218 (20%), Positives = 79/218 (36%), Gaps = 51/218 (23%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLS 96
             ++  A+ GIG   A VL++ GA + + AR+ +  + +  R            +  DL 
Sbjct: 21  GVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRSGHRY-----------VVCDLR 69

Query: 97  SLSSVRNFVSQFHSLNLPLNLLINNAG--KFAHQHAISEDGIEMTFATNYLGHFLLTKLL 154
               +     +       +++L+ NAG  K      ++ +  +    + +L    + +  
Sbjct: 70  KD--LDLLFEKVK----EVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNY 123

Query: 155 LKKMIETAKATGIQGRIVNVSSSIHSWFSGDM-IRYLGQISRNKSHYDATRA--YALSK- 210
           L  M E        GRIV ++S      S    I  L          ++ R       K 
Sbjct: 124 LPAMKE-KGW----GRIVAITSF-----SVISPIENLY-------TSNSARMALTGFLKT 166

Query: 211 LANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRE 248
           L+      E+A         +TVNCV PG   T   +E
Sbjct: 167 LS-----FEVAPY------GITVNCVAPGWTETERVKE 193

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* Length = 291

 Score = 98.2 bits (245), Expect = 6e-24
 Identities = 48/246 (19%), Positives = 75/246 (30%), Gaps = 63/246 (25%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLP-ARSLKAAEEAKARLASDCPGSDIVVLPLDL 95
            A++TGA   +G   A  L   G  + L   RS   A    A L +  P S I V   DL
Sbjct: 11  VALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITV-QADL 69

Query: 96  SSLSSVRNFVSQFHSLNL-----------------PLNLLINNAG--------------- 123
           S++++     +   +                      ++L+NNA                
Sbjct: 70  SNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGH 129

Query: 124 -KFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKAT-GIQGRIVNVSSSIHSW 181
                     E      F +N +  + L K    ++  T     G    I+N+     + 
Sbjct: 130 EPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINM-VDAMTN 188

Query: 182 FSGDMIRYLGQISRNKSHYDATRAYALSKLANVLHTK----ELAQRLKQMEANVTVNCVH 237
                   LG              Y ++K A    T+    ELA         + VN V 
Sbjct: 189 -----QPLLGYTI-----------YTMAKGALEGLTRSAALELAPL------QIRVNGVG 226

Query: 238 PGIVRT 243
           PG+   
Sbjct: 227 PGLSVL 232

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* Length = 291

 Score = 98.4 bits (246), Expect = 7e-24
 Identities = 60/214 (28%), Positives = 94/214 (43%), Gaps = 32/214 (14%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLP-ARSLKAAEEAKARLASDCPGSDIVVLPLDL 95
             +ITG  SGIG   +   AK GA + +        A E K  +  +  G   V+LP DL
Sbjct: 49  NVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKE--GVKCVLLPGDL 106

Query: 96  SSLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHA---ISEDGIEMTFATNYLGHFLLTK 152
           S     ++ V +       LN+L+NN  +   Q     I+ + +E TF  N   +F +TK
Sbjct: 107 SDEQHCKDIVQETVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTK 166

Query: 153 LLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLA 212
             L  + +          I+N ++SI +        Y G    N++  D    Y+ +K A
Sbjct: 167 AALSHLKQ-------GDVIIN-TASIVA--------YEG----NETLID----YSATKGA 202

Query: 213 NVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLT 246
            V  T+ L+Q L  ++  + VN V PG + T L 
Sbjct: 203 IVAFTRSLSQSL--VQKGIRVNGVAPGPIWTPLI 234

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} Length = 255

 Score = 97.3 bits (243), Expect = 8e-24
 Identities = 40/221 (18%), Positives = 60/221 (27%), Gaps = 39/221 (17%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLS 96
              ITG+ SGIGA    +LA+ G  ++   R      + +A L++  PG     +   L 
Sbjct: 3   VIAITGSASGIGAALKELLARAGHTVIGIDRG---QADIEADLST--PGGRETAVAAVLD 57

Query: 97  SLSS-----VRNFVSQFHSLNLPLNLLINNAGKFAHQHA----ISEDGIEMTFATNYLGH 147
                    V        + N  L + +N  G  A        +S            +  
Sbjct: 58  RCGGVLDGLVCCAGVGVTAANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAA 117

Query: 148 FLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYA 207
                  L  +          G                +                  AYA
Sbjct: 118 TQPGAAELPMVEAMLA-----GDEARAIELAEQQGQTHL------------------AYA 154

Query: 208 LSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRE 248
            SK A     +            V +N V PG V T L + 
Sbjct: 155 GSKYAVTCLARRNVVDW--AGRGVRLNVVAPGAVETPLLQA 193

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} Length = 257

 Score = 96.9 bits (242), Expect = 1e-23
 Identities = 45/224 (20%), Positives = 86/224 (38%), Gaps = 37/224 (16%)

Query: 32  NLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVL 91
            +    A++TG  SG+G  T + L   GA++V+    ++  +           G      
Sbjct: 6   EIRDAVAVVTGGASGLGLATTKRLLDAGAQVVVL--DIRGEDVVAD------LGDRARFA 57

Query: 92  PLDLSSLSSVRNFVSQFHSLNLPLNLLINNAG------KFAHQHAISEDGIEMTFATNYL 145
             D++  ++V + +    ++   L +++N AG        +     S          N +
Sbjct: 58  AADVTDEAAVASALDLAETMG-TLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLV 116

Query: 146 GHFLLTKLLLKKMIET---AKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDA 202
           G F + +L  +++ +T         +G I+N +S   + F G +    GQ          
Sbjct: 117 GSFNVLRLAAERIAKTEPVGPNAEERGVIINTASV--AAFDGQI----GQA--------- 161

Query: 203 TRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLT 246
             AY+ SK   V  T  +A+ L      + V  + PG+  T L 
Sbjct: 162 --AYSASKGGVVGMTLPIARDL--ASHRIRVMTIAPGLFDTPLL 201

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 Length = 328

 Score = 97.1 bits (242), Expect = 3e-23
 Identities = 48/246 (19%), Positives = 75/246 (30%), Gaps = 63/246 (25%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLP-ARSLKAAEEAKARLASDCPGSDIVVLPLDL 95
            A++TGA   +G   A  L   G  + L   RS   A    A L +  P S I V   DL
Sbjct: 48  VALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITV-QADL 106

Query: 96  SSLSSVRNFVSQFHSLNL-----------------PLNLLINNAG--------------- 123
           S++++     +   +                      ++L+NNA                
Sbjct: 107 SNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGH 166

Query: 124 -KFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKAT-GIQGRIVNVSSSIHSW 181
                     E      F +N +  + L K    ++  T     G    I+N+     + 
Sbjct: 167 EPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINM-VDAMTN 225

Query: 182 FSGDMIRYLGQISRNKSHYDATRAYALSKLANVLHTK----ELAQRLKQMEANVTVNCVH 237
                   LG              Y ++K A    T+    ELA         + VN V 
Sbjct: 226 -----QPLLGYTI-----------YTMAKGALEGLTRSAALELAPL------QIRVNGVG 263

Query: 238 PGIVRT 243
           PG+   
Sbjct: 264 PGLSVL 269

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} Length = 202

 Score = 93.5 bits (233), Expect = 7e-23
 Identities = 23/218 (10%), Positives = 67/218 (30%), Gaps = 53/218 (24%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLS 96
             ++ GA+  +G+     L  + A ++   R                       + +D++
Sbjct: 5   KILLIGASGTLGSAVKERLE-KKAEVITAGRHSGD-------------------VTVDIT 44

Query: 97  SLSSVRNFVSQFHSLNLPLNLLINNAG--KFAHQHAISEDGIEMTFATNYLGHFLLTKLL 154
           ++ S++    Q       ++ +++  G   F+    ++ +   +T ++   G   L  L 
Sbjct: 45  NIDSIKKMYEQVG----KVDAIVSATGSATFSPLTELTPEKNAVTISSKLGGQINLVLLG 100

Query: 155 LKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLANV 214
           +  + +       +G     +  +                   +        A++  A  
Sbjct: 101 IDSLND-------KGSFTLTTGIMME-----------DPIVQGASAAMANG-AVTAFAKS 141

Query: 215 LHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGF 252
               E+ +        + +N V P ++     +    F
Sbjct: 142 A-AIEMPR-------GIRINTVSPNVLEESWDKLEPFF 171

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} Length = 278

 Score = 94.6 bits (236), Expect = 1e-22
 Identities = 50/236 (21%), Positives = 79/236 (33%), Gaps = 59/236 (25%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVL------------PARSLKAAEEAKARLASDCP 84
            A ITGA  G G   A  LA  GA ++             P  + +        +     
Sbjct: 15  VAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDI-- 72

Query: 85  GSDIVVLPLDLSSLSSVRNFV----SQFHSLNLPLNLLINNAGKFAHQHAISEDGIEMTF 140
           GS IV    D+    S+   +     +       L++++ NAG      +  +DG     
Sbjct: 73  GSRIVARQADVRDRESLSAALQAGLDELGR----LDIVVANAGIAP--MSAGDDGWHDVI 126

Query: 141 ATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHY 200
             N  G +   K+ +  +++     G  G IV +SSS     +G  +  +G        Y
Sbjct: 127 DVNLTGVYHTIKVAIPTLVK----QGTGGSIVLISSS-----AG--LAGVGSADPGSVGY 175

Query: 201 DA--------TRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRE 248
            A         R YA            LA +       + VN +HP  V T +   
Sbjct: 176 VAAKHGVVGLMRVYAN----------LLAGQ------MIRVNSIHPSGVETPMINN 215

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} Length = 280

 Score = 94.2 bits (235), Expect = 2e-22
 Identities = 52/238 (21%), Positives = 81/238 (34%), Gaps = 64/238 (26%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVL-------------PARSLKAAEEAKARLASDC 83
            A ITGA  G G   A  LA  GA ++                 S +  +E    +    
Sbjct: 17  VAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQ- 75

Query: 84  PGSDIVVLPLDLSSLSSVRNFV----SQFHSLNLPLNLLINNAG--KFAHQHAISEDGIE 137
            G   +   LD+   +++R  V     QF      L++++ NAG   +     ++++  +
Sbjct: 76  -GRKALTRVLDVRDDAALRELVADGMEQFGR----LDVVVANAGVLSWGRVWELTDEQWD 130

Query: 138 MTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNK 197
                N  G +   +  +  MIE     G  G IV VSSS     +G             
Sbjct: 131 TVIGVNLTGTWRTLRATVPAMIE----AGNGGSIVVVSSS-----AGLK----AT--PGN 175

Query: 198 SHYDA--------TRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTR 247
            HY A        T   A+          EL +        + VN +HP  V T +  
Sbjct: 176 GHYSASKHGLTALTNTLAI----------ELGEY------GIRVNSIHPYSVETPMIE 217

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} PDB: 3gdf_A Length = 267

 Score = 93.8 bits (234), Expect = 2e-22
 Identities = 51/249 (20%), Positives = 81/249 (32%), Gaps = 54/249 (21%)

Query: 37  TAIITGA--TSGIGAETARVLAKRGARLVL-PARSLKAAEEAKARLASDCPGSDIVVLPL 93
             ++TGA    G+G E AR  A+ GA + +  A   + AEE    L     G        
Sbjct: 22  VVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTY-GIKAKAYKC 80

Query: 94  DLSSLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAISEDG--IEMT-------FATNY 144
            + S  S    V    +    ++  I NAG        + D   ++ +          + 
Sbjct: 81  QVDSYESCEKLVKDVVADFGQIDAFIANAG-------ATADSGILDGSVEAWNHVVQVDL 133

Query: 145 LGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMI-RYLGQISRNKSHYDAT 203
            G F   K +     E        G +V  +S      SG +      Q           
Sbjct: 134 NGTFHCAKAVGHHFKERGT-----GSLVITAS-----MSGHIANFPQEQT---------- 173

Query: 204 RAYALSKLANVLH-TKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTS 262
            +Y ++K A  +H  + LA    +      VN + PG + T L+     F+         
Sbjct: 174 -SYNVAK-AGCIHMARSLA---NEWRDFARVNSISPGYIDTGLSD----FVPKET---QQ 221

Query: 263 KLLKTIPQG 271
                IP G
Sbjct: 222 LWHSMIPMG 230

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} Length = 277

 Score = 94.2 bits (235), Expect = 2e-22
 Identities = 49/240 (20%), Positives = 74/240 (30%), Gaps = 66/240 (27%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVL-------------PARSLKAAEEAKARLASDC 83
            A ITGA  G G   A  +A  GA ++                 S     E    + +  
Sbjct: 13  VAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAA- 71

Query: 84  PGSDIVVLPLDLSSLSSVRNFV----SQFHSLNLPLNLLINNAG--KFAHQHAISEDGIE 137
               IV   +D      +R  V    +        L++++ NAG         I+ +   
Sbjct: 72  -NRRIVAAVVDTRDFDRLRKVVDDGVAALGR----LDIIVANAGVAAPQAWDDITPEDFR 126

Query: 138 MTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQI-SRN 196
                N  G +        ++IE     G  G I+ +SS+             G      
Sbjct: 127 DVMDINVTGTWNTVMAGAPRIIE----GGRGGSIILISSA------------AGMKMQPF 170

Query: 197 KSHYDA--------TRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRE 248
             HY A         RA+A           EL +       ++ VN VHPG V T +   
Sbjct: 171 MIHYTASKHAVTGLARAFAA----------ELGKH------SIRVNSVHPGPVNTPMGSG 214

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} Length = 324

 Score = 94.4 bits (235), Expect = 3e-22
 Identities = 43/215 (20%), Positives = 77/215 (35%), Gaps = 34/215 (15%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCP---GSDIVVLPL 93
             +ITGA+SG G  TA  LA  G R+    R +     +     +        D+  L L
Sbjct: 7   IILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLEL 66

Query: 94  DLSSLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAI---SEDGIEMTFATNYLGHFLL 150
           D+ S  SV   + Q    +  +++LI+NAG           + +     +  N L    +
Sbjct: 67  DVQSQVSVDRAIDQIIGEDGRIDVLIHNAG-HMVFGPAEAFTPEQFAELYDINVLSTQRV 125

Query: 151 TKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRN--KSHYDATRAYAL 208
            +  L  M    +     G ++ +SSS                      + Y A +  A+
Sbjct: 126 NRAALPHM----RRQK-HGLLIWISSS------------SSAGGTPPYLAPYFAAK-AAM 167

Query: 209 SKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRT 243
             +A     +EL++        +  + + PG   +
Sbjct: 168 DAIAVQYA-RELSRW------GIETSIIVPGAFTS 195

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} PDB: 3uwr_A* Length = 286

 Score = 93.4 bits (233), Expect = 3e-22
 Identities = 51/243 (20%), Positives = 77/243 (31%), Gaps = 70/243 (28%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVL----------------PARSLKAAEEAKARLA 80
            A +TGA  G G   A  LA+ GA ++                 PA + +   E    + 
Sbjct: 13  VAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVK 72

Query: 81  SDCPGSDIVVLPLDLSSLSSVRNFV----SQFHSLNLPLNLLINNAG---KFAHQHAISE 133
                  IV   +D+    +++  V     Q       L++++ NAG           SE
Sbjct: 73  GH--NRRIVTAEVDVRDYDALKAAVDSGVEQLGR----LDIIVANAGIGNGGDTLDKTSE 126

Query: 134 DGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQI 193
           +        N  G +   K  +  MI      G  G I+  SS              G  
Sbjct: 127 EDWTEMIDINLAGVWKTVKAGVPHMIA----GGRGGSIILTSSV------------GGLK 170

Query: 194 -SRNKSHYDA--------TRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTR 244
              +  HY A         RA+ +          EL Q        + VN VHP  V+T 
Sbjct: 171 AYPHTGHYVAAKHGVVGLMRAFGV----------ELGQH------MIRVNSVHPTHVKTP 214

Query: 245 LTR 247
           +  
Sbjct: 215 MLH 217

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3q6i_A* 3m1l_A Length = 454

 Score = 95.4 bits (238), Expect = 4e-22
 Identities = 69/302 (22%), Positives = 113/302 (37%), Gaps = 72/302 (23%)

Query: 4   TVKYLL--GSAGASG---YGSKSTAEQVTDGCPNLSSVTAIITGATSGIGAETARVLAKR 58
           T++++L   SA   G       + +    D    L    A++TGA  GIGA  A V A+ 
Sbjct: 177 TMRFILSAKSAYVDGQVFRVGAADSTPPADWDKPLDGKVAVVTGAARGIGATIAEVFARD 236

Query: 59  GARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHS-LNLPLNL 117
           GA +V        A E   R+A    G+    L LD+++  +V    +         +++
Sbjct: 237 GATVVAIDVD--GAAEDLKRVADKVGGT---ALTLDVTADDAVDKITAHVTEHHGGKVDI 291

Query: 118 LINNAGKFAHQHAISEDGIEM---------TFATNYLGHFLLTKLLLKKMIETAKATGIQ 168
           L+NNAG       I+ D +             A N L    LT+ L+          G  
Sbjct: 292 LVNNAG-------ITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGT---IGEG-- 339

Query: 169 GRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRA--YALSK-LANVLHTKELAQRLK 225
           GR++ +SS   +  +G+     GQ     ++Y  T+A    L++ LA       LA +  
Sbjct: 340 GRVIGLSSM--AGIAGN----RGQ-----TNYATTKAGMIGLAEALA-----PVLADK-- 381

Query: 226 QMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSKLLKTIPQG--------AATTCY 277
                +T+N V PG + T++T         +         +             A    Y
Sbjct: 382 ----GITINAVAPGFIETKMTEA-------IPLATREVGRRLNSLFQGGQPVDVAELIAY 430

Query: 278 VA 279
            A
Sbjct: 431 FA 432

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} Length = 299

 Score = 92.3 bits (230), Expect = 1e-21
 Identities = 45/239 (18%), Positives = 78/239 (32%), Gaps = 64/239 (26%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVL------------PARSLKAAEEAKARLASDCP 84
            A ITGA  G G   A  LA+ GA ++             P  +     E   ++ +   
Sbjct: 30  VAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEAL-- 87

Query: 85  GSDIVVLPLDLSSLSSVRNFV----SQFHSLNLPLNLLINNAG---KFAHQHAISEDGIE 137
           G  I+   +D+    +++  V    +Q       L++++ NA    +    + +      
Sbjct: 88  GRRIIASQVDVRDFDAMQAAVDDGVTQLGR----LDIVLANAALASEGTRLNRMDPKTWR 143

Query: 138 MTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNK 197
                N  G ++  ++ +  ++   +     G IV  SS       G +           
Sbjct: 144 DMIDVNLNGAWITARVAIPHIMAGKRG----GSIVFTSSI-----GG-LRGAENI----- 188

Query: 198 SHYDA--------TRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRE 248
            +Y A         R  AL          EL  R      N+ VN V P  V T +   
Sbjct: 189 GNYIASKHGLHGLMRTMAL----------ELGPR------NIRVNIVCPSSVATPMLLN 231

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 242

 Score = 90.4 bits (225), Expect = 2e-21
 Identities = 56/217 (25%), Positives = 84/217 (38%), Gaps = 41/217 (18%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLS 96
           +A++TG  SG+G   A  L  RG R+V+              L  +  G D++ +  D++
Sbjct: 4   SALVTGGASGLGRAAALALKARGYRVVV------------LDLRRE--GEDLIYVEGDVT 49

Query: 97  SLSSVRNFVSQFHSLNLPLNLLINNAG------KFAHQHAISEDGIEMTFATNYLGHFLL 150
               VR  V++      PL  +++ AG          +     +        N LG F +
Sbjct: 50  REEDVRRAVARAQEEA-PLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNV 108

Query: 151 TKLLLKKMIET-AKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALS 209
            +L    M E    A G +G IVN +S   + F G +    GQ            AYA S
Sbjct: 109 LRLAAWAMRENPPDAEGQRGVIVNTASV--AAFEGQI----GQA-----------AYAAS 151

Query: 210 KLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLT 246
           K   V  T   A+ L      + V  V PG+  T L 
Sbjct: 152 KGGVVALTLPAAREL--AGWGIRVVTVAPGLFDTPLL 186

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... Length = 327

 Score = 88.2 bits (219), Expect = 4e-20
 Identities = 49/216 (22%), Positives = 76/216 (35%), Gaps = 36/216 (16%)

Query: 37  TAIITGATSGIGAETARVLAK---RGARLVLPARSLKAAEE-AKARLASDCPGSDIVVLP 92
             +ITG +SGIG   A  LA    +  ++    R LK      +A  A  CP   +  L 
Sbjct: 4   VVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQ 63

Query: 93  LDLSSLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAI---SEDGIEMTFATNYLGHFL 149
           LD+    SV     +       +++L+ NAG       +    ED +      N +G   
Sbjct: 64  LDVRDSKSVAAARER--VTEGRVDVLVCNAG-LGLLGPLEALGEDAVASVLDVNVVGTVR 120

Query: 150 LTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQIS-RNKSHYDATRAYAL 208
           + +  L  M    K  G  GR++   S              G +       Y A++ +AL
Sbjct: 121 MLQAFLPDM----KRRG-SGRVLVTGSV------------GGLMGLPFNDVYCASK-FAL 162

Query: 209 SKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTR 244
             L   L    L          V ++ +  G V T 
Sbjct: 163 EGLCESLA-VLLLP------FGVHLSLIECGPVHTA 191

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} Length = 281

 Score = 86.9 bits (216), Expect = 8e-20
 Identities = 52/213 (24%), Positives = 84/213 (39%), Gaps = 33/213 (15%)

Query: 34  SSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPL 93
           S+   ++TGA+SG G   A      G  ++  AR  +A ++  A             + L
Sbjct: 4   SAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAY-----PDRAEAISL 58

Query: 94  DLSSLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAI---SEDGIEMTFATNYLGHFLL 150
           D++    +    +   +    +++L+NNAG      A    +E  +   F  +  G   L
Sbjct: 59  DVTDGERIDVVAADVLARYGRVDVLVNNAG-RTQVGAFEETTERELRDLFELHVFGPARL 117

Query: 151 TKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSK 210
           T+ LL +M    +  G  G +VN+ SS     S              S Y AT+  AL +
Sbjct: 118 TRALLPQM----RERG-SGSVVNI-SSFGGQLSFAGF----------SAYSATK-AALEQ 160

Query: 211 LANVLHTKELAQRLKQMEANVTVNCVHPGIVRT 243
           L+  L   E+A         + V  V PG  RT
Sbjct: 161 LSEGLA-DEVA------PFGIKVLIVEPGAFRT 186

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} Length = 317

 Score = 87.3 bits (217), Expect = 9e-20
 Identities = 53/238 (22%), Positives = 89/238 (37%), Gaps = 63/238 (26%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVL------------PARSLKAAEEAKARLASDCP 84
            A ITGA  G G   A  LA+ GA +V                S +  +E    +     
Sbjct: 48  VAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQ-- 105

Query: 85  GSDIVVLPLDLSSLSSVRNFV----SQFHSLNLPLNLLINNAG--KFAHQHAISEDGIEM 138
           G  I+    D+  L+S++  V    ++F      +++L++N G        ++++     
Sbjct: 106 GRRIIARQADVRDLASLQAVVDEALAEFGH----IDILVSNVGISNQGEVVSLTDQQWSD 161

Query: 139 TFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKS 198
              TN +G +   + +L  MIE  +     G ++ VSS+      G +    GQ     S
Sbjct: 162 ILQTNLIGAWHACRAVLPSMIERGQG----GSVIFVSST-----VG-LRGAPGQ-----S 206

Query: 199 HYDA--------TRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRE 248
           HY A          + A           E+ +       N+ VN V+PG V T +   
Sbjct: 207 HYAASKHGVQGLMLSLA----------NEVGRH------NIRVNSVNPGAVNTEMALN 248

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} Length = 281

 Score = 84.1 bits (209), Expect = 6e-19
 Identities = 51/238 (21%), Positives = 79/238 (33%), Gaps = 64/238 (26%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVL------------PARSLKAAEEAKARLASDCP 84
           TA+ITG   G+G   A  LA+ GA + +            P  +     E  A +     
Sbjct: 12  TALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKT-- 69

Query: 85  GSDIVVLPLDLSSLSSVRNFV----SQFHSLNLPLNLLINNAG--KFAHQHAISEDGIEM 138
           G   +   +D+   +++ +FV             +++ I NAG    A    +     + 
Sbjct: 70  GRRCISAKVDVKDRAALESFVAEAEDTLGG----IDIAITNAGISTIALLPEVESAQWDE 125

Query: 139 TFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKS 198
              TN  G F     +   MI+        GRIV VSS       G       Q     +
Sbjct: 126 VIGTNLTGTFNTIAAVAPGMIKRNY-----GRIVTVSSM-----LG-HSANFAQ-----A 169

Query: 199 HYDA--------TRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRE 248
            Y +        T+  A           +L          +TVN V PG + T +T  
Sbjct: 170 SYVSSKWGVIGLTKCAA----------HDLVGY------GITVNAVAPGNIETPMTHN 211

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} Length = 322

 Score = 76.6 bits (189), Expect = 5e-16
 Identities = 58/230 (25%), Positives = 88/230 (38%), Gaps = 49/230 (21%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLV----------LPARSLKAAEEAKARLASDCPGS 86
             I+TGA  GIG   A   A  GAR+V           PA    AA+     + +   G 
Sbjct: 29  VVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAA--GG 86

Query: 87  DIVVLPLDLSSLSSVRNFVSQ----FHSLNLPLNLLINNAG-----KFAHQHAISEDGIE 137
           + V    +++        +      F      L++L+NNAG             SE+  +
Sbjct: 87  EAVADGSNVADWDQAAGLIQTAVETFGG----LDVLVNNAGIVRDRMI---ANTSEEEFD 139

Query: 138 MTFATNYLGHFLLTKLLLKKMIETAKATG-IQGRIVNVSSSIHSWFSGDMIRYLGQISRN 196
              A +  GHF   +         +KA   + GRI+N SS   +   G +    GQ    
Sbjct: 140 AVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSG--AGLQGSV----GQ---- 189

Query: 197 KSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLT 246
             +Y A +A  ++ L  V    E+ +        VTVN + P   RTR+T
Sbjct: 190 -GNYSAAKA-GIATLTLVGA-AEMGRY------GVTVNAIAPSA-RTRMT 229

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604

 Score = 72.4 bits (178), Expect = 3e-14
 Identities = 59/251 (23%), Positives = 99/251 (39%), Gaps = 59/251 (23%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVL---------PARSLKAAEEAKARLASDCPGSD 87
             IITGA  G+G   +   AK GA++V+            + KAA+     +  +  G  
Sbjct: 10  VVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKN--GGV 67

Query: 88  IVVLPLDLSSLSSVRNFVSQ----FHSLNLPLNLLINNAG--KFAHQHAISEDGIEMTFA 141
            V    D +++      V      F ++++    +INNAG  + A    ++E   ++   
Sbjct: 68  AVA---DYNNVLDGDKIVETAVKNFGTVHV----IINNAGILRDASMKKMTEKDYKLVID 120

Query: 142 TNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYD 201
            +  G F +TK       +        GRIVN SS      +G +    GQ     ++Y 
Sbjct: 121 VHLNGAFAVTKAAWPYFQKQKY-----GRIVNTSSP-----AG-LYGNFGQ-----ANYA 164

Query: 202 ATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRE----------REG 251
           + ++ AL   A  L  KE A+       N+  N + P   R+R+T               
Sbjct: 165 SAKS-ALLGFAETLA-KEGAKY------NIKANAIAPLA-RSRMTESIMPPPMLEKLGPE 215

Query: 252 FITDLVFFLTS 262
            +  LV +L+S
Sbjct: 216 KVAPLVLYLSS 226

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604

 Score = 62.8 bits (153), Expect = 4e-11
 Identities = 54/270 (20%), Positives = 106/270 (39%), Gaps = 63/270 (23%)

Query: 15  SGYGSKSTAEQVTDGCPNLSSVTAIITGATSGIGAETARVLAKRGARLVL----PARSLK 70
           +        +       +L     +ITGA +G+G E A+  AK GA++V+     A    
Sbjct: 302 NEARKLPANDASGAPTVSLKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKDATKT- 360

Query: 71  AAE------EAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLPLNLLINNAG- 123
             E      EA          S+ ++           +N + ++ ++++    L+NNAG 
Sbjct: 361 VDEIKAAGGEAWPDQHDVAKDSEAII-----------KNVIDKYGTIDI----LVNNAGI 405

Query: 124 -KFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWF 182
            +      +S+   +     + +G F L++L     +E        GRI+N++S+     
Sbjct: 406 LRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQF-----GRIINITST----- 455

Query: 183 SGDMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVR 242
           SG +    GQ     ++Y +++A  +  L+  +   E A+       N+ VN V P    
Sbjct: 456 SG-IYGNFGQ-----ANYSSSKA-GILGLSKTMA-IEGAKN------NIKVNIVAPHA-E 500

Query: 243 TRLTR---EREGF-------ITDLVFFLTS 262
           T +T      +         +  L+ +L +
Sbjct: 501 TAMTLSIMREQDKNLYHADQVAPLLVYLGT 530

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* Length = 319

 Score = 71.2 bits (175), Expect = 4e-14
 Identities = 52/251 (20%), Positives = 95/251 (37%), Gaps = 59/251 (23%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVL---------PARSLKAAEEAKARLASDCPGSD 87
             ++TGA  G+G   A   A+RGA +V+           +   AA++    +     G  
Sbjct: 11  VVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRR--GGK 68

Query: 88  IVVLPLDLSSLSSVRNFVSQ----FHSLNLPLNLLINNAG--KFAHQHAISEDGIEMTFA 141
            V    +  S+ +    V      F  +++    ++NNAG  +      IS++  ++   
Sbjct: 69  AVA---NYDSVEAGEKLVKTALDTFGRIDV----VVNNAGILRDRSFSRISDEDWDIIQR 121

Query: 142 TNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYD 201
            +  G F +T+     M +        GRI+  +S+  S   G+     GQ     ++Y 
Sbjct: 122 VHLRGSFQVTRAAWDHMKKQNY-----GRIIMTASA--SGIYGNF----GQ-----ANYS 165

Query: 202 ATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRE----------REG 251
           A +   L  LAN L   E  +       N+  N + P    +R+T            +  
Sbjct: 166 AAKL-GLLGLANTLV-IEGRKN------NIHCNTIAPNA-GSRMTETVMPEDLVEALKPE 216

Query: 252 FITDLVFFLTS 262
           ++  LV +L  
Sbjct: 217 YVAPLVLWLCH 227

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} Length = 613

 Score = 68.7 bits (168), Expect = 5e-13
 Identities = 55/247 (22%), Positives = 91/247 (36%), Gaps = 72/247 (29%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVL---------PARSLKAAE-----------EAK 76
            A++TGA +G+G E A + A+RGA++V+            S +AA+           EA 
Sbjct: 21  VAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGEAV 80

Query: 77  ARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLPLNLLINNAG-----KFAHQHAI 131
           A   S   G+ ++   +          F          +++L+NNAG             
Sbjct: 81  ADYNSVIDGAKVIETAIK--------AFGR--------VDILVNNAGILRDRSL---VKT 121

Query: 132 SEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLG 191
           SE    +    +  G F  T+     M +        GRI+  SS+  S   G+     G
Sbjct: 122 SEQDWNLVNDVHLKGSFKCTQAAFPYMKKQNY-----GRIIMTSSN--SGIYGN----FG 170

Query: 192 QISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREG 251
           Q             Y  +K+  +     +A        NV  N + P    +R+T   EG
Sbjct: 171 Q-----------VNYTAAKMGLIGLANTVAIEGA--RNNVLCNVIVPT-AASRMT---EG 213

Query: 252 FITDLVF 258
            + D++F
Sbjct: 214 ILPDILF 220

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} Length = 1688

 Score = 66.1 bits (161), Expect = 5e-12
 Identities = 78/339 (23%), Positives = 123/339 (36%), Gaps = 82/339 (24%)

Query: 37  TAIITGATSG-IGAETARVLAKRGARLV-----LPARSLKAAEEAKARLASDCPGSDIVV 90
             +ITGA  G IGAE  + L + GA++V        +     +   A+  +   GS ++V
Sbjct: 478 YVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGA--KGSTLIV 535

Query: 91  LPLDLSSLSSVRNFVS------QFHSLNLPLNLLINNAGKFAHQHAISEDGIEMTFA--T 142
           +P +  S   V   +       +   L   L+ +I     FA   AI E GIE+      
Sbjct: 536 VPFNQGSKQDVEALIEFIYDTEKNGGLGWDLDAII----PFA---AIPEQGIELEHIDSK 588

Query: 143 NYLGH-FLLTKL--LLKKMIETAKATGIQGRIVNV---SSSIHSWFSGDMIRYLGQISRN 196
           +   H  +LT +  ++  + +   A GI+ R   V    S  H  F GD     G     
Sbjct: 589 SEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNHGTFGGD-----G----- 638

Query: 197 KSHYDATRAYALSKLANVLHTKELAQRLKQMEA---NVTVNCVHPGIVRTRLTR------ 247
                    Y+ SKL+  L T  L  R    E+    +TV      I  TR T       
Sbjct: 639 --------MYSESKLS--LET--LFNR-WHSESWANQLTV--CGAIIGWTRGTGLMSANN 683

Query: 248 ------EREGFITDLVFFLT----SKLLKTIPQGAATTCYVAIHPRLVNVSG--KYFADC 295
                 E+ G  T    F        LL  +       C     P + +++G  ++  + 
Sbjct: 684 IIAEGIEKMGVRT----FSQKEMAFNLLGLLTPEVVELC--QKSPVMADLNGGLQFVPEL 737

Query: 296 NEAWTSKLGSNSNEASRLWAASELLVSRDPKSVFDPLSA 334
            E  T+KL     E S +  A  +  + + K V    + 
Sbjct: 738 KEF-TAKLRKELVETSEVRKAVSIETALEHKVVNGNSAD 775

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* Length = 287

 Score = 60.7 bits (147), Expect = 9e-11
 Identities = 17/93 (18%), Positives = 33/93 (35%), Gaps = 10/93 (10%)

Query: 31  PNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVV 90
            ++    A++   T  +G  +A +LA  GA +VL  R L  A+ A   +      +   V
Sbjct: 115 GSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVN---V 171

Query: 91  LPLDLSSLSSVRNFVSQFHSLNLPLNLLINNAG 123
              + +  +S    V          + +     
Sbjct: 172 TAAETADDASRAEAVKG-------AHFVFTAGA 197

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 58.3 bits (140), Expect = 2e-09
 Identities = 52/350 (14%), Positives = 92/350 (26%), Gaps = 135/350 (38%)

Query: 19  SKSTAEQVTDGCPNL-----SSVTAIITGAT----------SGIG-AETARVLAK----- 57
           +          C  L       VT  ++ AT            +   E   +L K     
Sbjct: 255 NAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCR 314

Query: 58  -----RGARLVLP-ARSLKAAE----------------EAKARLASDC-----PG----- 85
                R      P   S+ A                  +    +         P      
Sbjct: 315 PQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKM 374

Query: 86  -SDIVVLPLD-------LSSL------SSVRNFVSQFH--SL-------------NLPLN 116
              + V P         LS +      S V   V++ H  SL             ++ L 
Sbjct: 375 FDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLE 434

Query: 117 LLINNAGKFA-HQHAISEDGIEMTFATN-------------YLG-HF----------LLT 151
           L +    ++A H+  +    I  TF ++             ++G H           L  
Sbjct: 435 LKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFR 494

Query: 152 KLLL------KKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRA 205
            + L      +K+   + A    G I+N            +  Y   I  N   Y+    
Sbjct: 495 MVFLDFRFLEQKIRHDSTAWNASGSILNTLQ--------QLKFYKPYICDNDPKYER--- 543

Query: 206 YALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITD 255
                +  +L        L ++E N+ +   +  ++R  L  E E    +
Sbjct: 544 ----LVNAILDF------LPKIEENL-ICSKYTDLLRIALMAEDEAIFEE 582

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 43.3 bits (101), Expect = 9e-05
 Identities = 49/304 (16%), Positives = 97/304 (31%), Gaps = 64/304 (21%)

Query: 65  PARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLPLNLLINN--- 121
           P+   +   E + RL +D      V    ++S L            L    N+LI+    
Sbjct: 105 PSMMTRMYIEQRDRLYNDNQ----VFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLG 160

Query: 122 AGK--FAHQHAISEDGIEMTFATN-Y---LGHFLLTKLLLKKMIETAKATGIQGRIVNVS 175
           +GK   A         ++       +   L +    + +L+ +         Q  +  + 
Sbjct: 161 SGKTWVALD-VCLSYKVQCKMDFKIFWLNLKNCNSPETVLEML---------QKLLYQID 210

Query: 176 SSIHSW--FSGDMIRYLGQISRNKSHYDATRAY--ALSKLANVLHTKELAQRLKQMEANV 231
            +  S    S ++   +  I         ++ Y   L  L NV + K          A  
Sbjct: 211 PNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAW-------NA-F 262

Query: 232 TVNCVHPGIVRTR-----------------LTREREGFITDLVFFLTSKLLKT----IPQ 270
            ++C    ++ TR                 L         D V  L  K L      +P+
Sbjct: 263 NLSC--KILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPR 320

Query: 271 GAATTCYVAIHPRLVNVSGKYFADCNEAWTSKLGSNSNEASRLWAAS-ELLVSRDPKSVF 329
                  +  +PR +++  +   D    W +    N ++ + +  +S  +L   + + +F
Sbjct: 321 EV-----LTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMF 375

Query: 330 DPLS 333
           D LS
Sbjct: 376 DRLS 379

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} Length = 795

 Score = 47.0 bits (112), Expect = 6e-06
 Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 3/74 (4%)

Query: 37  TAIITGATSGIGAETARVLA-KRGAR-LVLPARSLKAAEEAKARLAS-DCPGSDIVVLPL 93
           T ++TG T  +GAE AR L  +RG R LVL +R   AA  A   +A     G+++ +   
Sbjct: 532 TVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAYGAEVSLQAC 591

Query: 94  DLSSLSSVRNFVSQ 107
           D++   ++   ++ 
Sbjct: 592 DVADRETLAKVLAS 605

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A* Length = 496

 Score = 46.6 bits (111), Expect = 7e-06
 Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 6/75 (8%)

Query: 37  TAIITGATSGIGAETARVLAKRGAR-LVLPARS---LKAAEEAKARLASDCPGSDIVVLP 92
           + ++TG T GIG   AR LA++GA  LVL +R       A E +A L     G  + +  
Sbjct: 241 SVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQL--GVRVTIAA 298

Query: 93  LDLSSLSSVRNFVSQ 107
            D +   ++   +++
Sbjct: 299 CDAADREALAALLAE 313

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A* Length = 486

 Score = 46.2 bits (110), Expect = 9e-06
 Identities = 27/75 (36%), Positives = 40/75 (53%), Gaps = 6/75 (8%)

Query: 37  TAIITGATSGIGAETARVLAKRGAR-LVLPARSLKAAEEAK---ARLASDCPGSDIVVLP 92
           T ++TG T G+G + AR LA+RGA  L+L +RS   A+ A    A L +   G+   V  
Sbjct: 228 TVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEAL--GARTTVAA 285

Query: 93  LDLSSLSSVRNFVSQ 107
            D++   SVR  +  
Sbjct: 286 CDVTDRESVRELLGG 300

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae} Length = 525

 Score = 45.9 bits (109), Expect = 1e-05
 Identities = 16/52 (30%), Positives = 23/52 (44%), Gaps = 1/52 (1%)

Query: 37  TAIITGATSGIGAETARVLAKRGAR-LVLPARSLKAAEEAKARLASDCPGSD 87
           T ++TGA     AE AR LA+ GA  L+L      +        A++  G  
Sbjct: 253 TVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLA 304

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* Length = 2512

 Score = 46.0 bits (109), Expect = 1e-05
 Identities = 25/89 (28%), Positives = 42/89 (47%), Gaps = 3/89 (3%)

Query: 37   TAIITGATSGIGAETARVLAKRGAR-LVLPARSLKAAEEAKARLAS-DCPGSDIVVLPLD 94
            + +ITG   G G + A+ L  RGA+ LVL +RS         ++      G  ++V   +
Sbjct: 1886 SYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRRQGVQVLVSTSN 1945

Query: 95   LSSLSSVRNFVSQFHSLNLPLNLLINNAG 123
             SSL   R+ +++   L  P+  + N A 
Sbjct: 1946 ASSLDGARSLITEATQLG-PVGGVFNLAM 1973

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae} Length = 511

 Score = 43.3 bits (102), Expect = 7e-05
 Identities = 21/61 (34%), Positives = 26/61 (42%), Gaps = 6/61 (9%)

Query: 40  ITGATSGIGAETARVLAKRGAR-LVLPARS---LKAAEEAKARLASDCPGSDIVVLPLDL 95
           ITG    IG   AR LA  GA  LVL +R       A E    L     G ++V    D+
Sbjct: 264 ITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGH--GCEVVHAACDV 321

Query: 96  S 96
           +
Sbjct: 322 A 322

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	336
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	100.0
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	100.0
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	100.0
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	100.0
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	100.0
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	100.0
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	100.0
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	100.0
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	100.0
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	100.0
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	100.0
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	100.0
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	100.0
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	100.0
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	100.0
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	100.0
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	100.0
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	100.0
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	100.0
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	100.0
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	100.0
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	100.0
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	100.0
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	100.0
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	100.0
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	100.0
3imf_A	257	Short chain dehydrogenase; structural genomics, in	100.0
3rih_A	293	Short chain dehydrogenase or reductase; structural	100.0
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	100.0
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	100.0
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	100.0
4dqx_A	277	Probable oxidoreductase protein; structural genomi	100.0
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	100.0
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	100.0
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	100.0
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	100.0
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	100.0
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	100.0
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	100.0
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	100.0
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	100.0
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	100.0
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	100.0
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	100.0
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	100.0
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	100.0
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	100.0
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	100.0
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	100.0
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	100.0
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	100.0
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	100.0
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	100.0
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	100.0
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	100.0
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	100.0
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	100.0
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	100.0
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	100.0
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	100.0
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	100.0
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	100.0
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	100.0
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	100.0
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	100.0
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	100.0
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	100.0
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	100.0
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	100.0
3cxt_A	291	Dehydrogenase with different specificities; rossma	100.0
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	100.0
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	100.0
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	100.0
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	100.0
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	100.0
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	100.0
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	100.0
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	100.0
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	100.0
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	100.0
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	100.0
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	100.0
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	100.0
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	100.0
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	100.0
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	100.0
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	100.0
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	100.0
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	100.0
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	100.0
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
1xhl_A	297	Short-chain dehydrogenase/reductase family member	100.0
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	100.0
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	100.0
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	100.0
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	100.0
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	100.0
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	100.0
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	100.0
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	100.0
1xkq_A	280	Short-chain reductase family member (5D234); parra	100.0
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	100.0
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	100.0
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	100.0
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	100.0
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	100.0
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	100.0
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	100.0
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	100.0
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	100.0
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	100.0
1spx_A	278	Short-chain reductase family member (5L265); paral	100.0
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	100.0
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	100.0
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	100.0
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	100.0
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	100.0
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	100.0
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	100.0
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	100.0
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	100.0
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	100.0
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	100.0
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	100.0
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	100.0
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	100.0
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	100.0
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	100.0
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	100.0
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	100.0
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	100.0
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	100.0
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	100.0
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	100.0
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	100.0
1xq1_A	266	Putative tropinone reducatse; structural genomics,	100.0
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	100.0
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	100.0
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	100.0
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	100.0
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	100.0
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	100.0
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	100.0
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	100.0
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	100.0
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	100.0
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	100.0
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	100.0
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	100.0
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	100.0
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	100.0
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	100.0
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	100.0
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	100.0
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	100.0
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	100.0
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	100.0
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	100.0
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	100.0
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	100.0
4e4y_A	244	Short chain dehydrogenase family protein; structur	100.0
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	100.0
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	100.0
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	100.0
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	100.0
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	100.0
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	100.0
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	100.0
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	100.0
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	100.0
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	100.0
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	100.0
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	100.0
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	100.0
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	100.0
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	100.0
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	100.0
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	100.0
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	100.0
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	100.0
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	100.0
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	100.0
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	100.0
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	100.0
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	100.0
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	100.0
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	100.0
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	100.0
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	100.0
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	100.0
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	100.0
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	100.0
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	100.0
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	100.0
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	100.0
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	100.0
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	100.0
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	100.0
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	100.0
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	100.0
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	100.0
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	100.0
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	99.97
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	99.97
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	99.97
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	99.97
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	99.97
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	99.97
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	99.96
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	99.95
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	99.95
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	99.94
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	99.93
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	99.92
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	99.92
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	99.92
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	99.91
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	99.91
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	99.9
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	99.9
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	99.9
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	99.9
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	99.9
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	99.89
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	99.89
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	99.89
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	99.89
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	99.89
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	99.89
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	99.88
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	99.88
1xq6_A	253	Unknown protein; structural genomics, protein stru	99.88
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	99.88
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	99.88
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	99.88
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	99.88
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	99.88
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	99.87
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	99.87
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	99.87
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	99.87
4f6c_A	427	AUSA reductase domain protein; thioester reductase	99.87
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	99.87
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	99.87
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	99.86
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	99.86
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	99.86
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	99.86
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	99.86
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	99.85
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	99.85
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	99.85
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	99.85
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	99.85
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	99.85
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	99.85
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	99.84
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	99.84
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	99.84
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	99.84
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	99.84
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	99.84
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	99.84
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	99.84
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	99.84
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	99.83
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	99.83
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	99.83
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	99.82
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	99.82
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	99.81
4b8w_A	319	GDP-L-fucose synthase; oxidoreductase; HET: NAP GD	99.81
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	99.81
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	99.81
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	99.81
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	99.81
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	99.8
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	99.79
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	99.79
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	99.79
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	99.78
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	99.78
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	99.78
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	99.78
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	99.77
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	99.76
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	99.75
4f6l_B	508	AUSA reductase domain protein; thioester reductase	99.75
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	99.73
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	99.73
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	99.71
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	99.69
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	99.68
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	99.67
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	99.67
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	99.66
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	99.65
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	99.64
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	99.64
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	99.59
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	99.58
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	99.57
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	99.55
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	99.53
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	99.35
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	99.32
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	99.07
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	98.98
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	98.83
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	98.78
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	98.67
3gxh_A	157	Putative phosphatase (DUF442); YP_001181608.1, str	98.63
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	98.58
3ond_A	488	Adenosylhomocysteinase; plant protein, enzyme-subs	98.56
1nvt_A	287	Shikimate 5'-dehydrogenase; structural genomics, P	98.53
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	98.53
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	98.52
2o7s_A	523	DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat	98.51
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	98.5
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	98.42
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	98.35
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	98.33
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	98.32
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	98.32
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	98.32
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	98.3
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	98.26
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	98.25
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	98.24
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	98.23
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	98.21
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	98.21
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	98.2
1b8p_A	329	Protein (malate dehydrogenase); oxidoreductase; 1.	98.14
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	98.1
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	98.08
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	98.04
1id1_A	153	Putative potassium channel protein; RCK domain, E.	98.01
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	97.99
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	97.95
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	97.94
1p77_A	272	Shikimate 5-dehydrogenase; NADPH, oxidoreductase;	97.93
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	97.92
3gms_A	340	Putative NADPH:quinone reductase; structural genom	97.89
1smk_A	326	Malate dehydrogenase, glyoxysomal; tricarboxylic c	97.87
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	97.87
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	97.86
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	97.8
4eye_A	342	Probable oxidoreductase; structural genomics, niai	97.8
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	97.79
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	97.78
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	97.78
3h8v_A	292	Ubiquitin-like modifier-activating enzyme 5; rossm	97.77
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	97.76
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	97.74
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	97.71
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	97.71
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	97.7
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	97.66
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	97.62
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	97.6
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	97.6
1hye_A	313	L-lactate/malate dehydrogenase; nucleotide binding	97.59
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	97.54
3c85_A	183	Putative glutathione-regulated potassium-efflux S	97.53
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	97.49
1zud_1	251	Adenylyltransferase THIF; thiamin, thiazole, prote	97.45
1o6z_A	303	MDH, malate dehydrogenase; halophilic, ION-binding	97.45
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	97.44
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	97.42
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	97.41
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	97.37
1p9o_A	313	Phosphopantothenoylcysteine synthetase; ligase; 2.	97.33
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	97.31
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	97.29
1mld_A	314	Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D	97.27
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	97.24
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	97.23
3rui_A	340	Ubiquitin-like modifier-activating enzyme ATG7; au	97.21
3fi9_A	343	Malate dehydrogenase; structural genomics, oxidore	97.2
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	97.15
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	97.1
3pqe_A	326	L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas	97.07
3h5n_A	353	MCCB protein; ubiquitin-activating enzyme, microci	97.04
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	97.03
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	97.01
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	97.0
4gsl_A	615	Ubiquitin-like modifier-activating enzyme ATG7; ub	96.97
3vku_A	326	L-LDH, L-lactate dehydrogenase; rossmann fold, NAD	96.96
4aj2_A	331	L-lactate dehydrogenase A chain; oxidoreductase-in	96.96
3gvi_A	324	Malate dehydrogenase; NAD, oxidoreductase, tricarb	96.95
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	96.94
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	96.93
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	96.9
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	96.9
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	96.9
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	96.88
3tum_A	269	Shikimate dehydrogenase family protein; rossmann-f	96.87
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	96.86
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	96.85
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	96.82
4h7p_A	345	Malate dehydrogenase; ssgcid, structural G seattle	96.81
3vh1_A	598	Ubiquitin-like modifier-activating enzyme ATG7; au	96.81
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	96.78
2aef_A	234	Calcium-gated potassium channel MTHK; rossmann fol	96.77
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	96.77
3fbt_A	282	Chorismate mutase and shikimate 5-dehydrogenase fu	96.77
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	96.76
5mdh_A	333	Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH	96.68
3ldh_A	330	Lactate dehydrogenase; oxidoreductase, CHOH donor,	96.66
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	96.66
3tl2_A	315	Malate dehydrogenase; center for structural genomi	96.65
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	96.64
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	96.64
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	96.62
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	96.62
1pzg_A	331	LDH, lactate dehydrogenase; apicomplexa, APAD, tet	96.61
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	96.57
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	96.57
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	96.55
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	96.53
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	96.51
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	96.5
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	96.48
1leh_A	364	Leucine dehydrogenase; oxidoreductase; 2.20A {Lysi	96.44
4e12_A	283	Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1	96.43
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	96.43
1x13_A	401	NAD(P) transhydrogenase subunit alpha; NAD(H)-bind	96.42
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	96.42
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	96.41
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	96.39
3p7m_A	321	Malate dehydrogenase; putative dehydrogenase, enzy	96.39
3uko_A	378	Alcohol dehydrogenase class-3; alcohol dehydrogena	96.37
3u62_A	253	Shikimate dehydrogenase; shikimate pathway, oxidor	96.37
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	96.37
1tt5_B	434	Ubiquitin-activating enzyme E1C isoform 1; cell cy	96.37
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	96.37
1y8q_B	640	Anthracycline-, ubiquitin-like 2 activating enzyme	96.35
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	96.29
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	96.23
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	96.21
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	96.2
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	96.17
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	96.16
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	96.15
1y8q_A	346	Ubiquitin-like 1 activating enzyme E1A; SUMO, hete	96.12
1ldn_A	316	L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NA	96.09
3c24_A	286	Putative oxidoreductase; YP_511008.1, structural g	96.06
3d0o_A	317	L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly	96.04
2hjr_A	328	Malate dehydrogenase; malaria, structural genomics	96.04
1oju_A	294	MDH, malate dehydrogenase; hyperthermophilic, oxid	96.01
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	95.97
3ggo_A	314	Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-b	95.91
3tri_A	280	Pyrroline-5-carboxylate reductase; amino acid bios	95.87
3d1l_A	266	Putative NADP oxidoreductase BF3122; structural ge	95.81
1ez4_A	318	Lactate dehydrogenase; rossmann fold, oxidoreducta	95.79
3p2o_A	285	Bifunctional protein fold; structural genomics, ce	95.77
1f0y_A	302	HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive	95.75
3hhp_A	312	Malate dehydrogenase; MDH, citric acid cycle, TCA	95.72
4eez_A	348	Alcohol dehydrogenase 1; site-saturation mutagenes	95.67
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	95.66
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	95.66
2zqz_A	326	L-LDH, L-lactate dehydrogenase; oxidoreductase, ro	95.64
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	95.62
2pv7_A	298	T-protein [includes: chorismate mutase (EC 5.4.99	95.6
2hk9_A	275	Shikimate dehydrogenase; shikimate pathway, drug d	95.59
2d5c_A	263	AROE, shikimate 5-dehydrogenase; substrate, dimer,	95.56
3qha_A	296	Putative oxidoreductase; seattle structural genomi	95.48
2vns_A	215	Metalloreductase steap3; metal-binding, transmembr	95.45
2raf_A	209	Putative dinucleotide-binding oxidoreductase; NP_7	95.45
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	95.43
1lnq_A	336	MTHK channels, potassium channel related protein;	95.42
1t2d_A	322	LDH-P, L-lactate dehydrogenase; ternary complex, o	95.39
3nep_X	314	Malate dehydrogenase; halophIle, molecular adpatat	95.36
4a26_A	300	Putative C-1-tetrahydrofolate synthase, cytoplasm;	95.35
1p9l_A	245	Dihydrodipicolinate reductase; oxidoreductase, lys	95.33
3ngx_A	276	Bifunctional protein fold; methylenetetrahydrofola	95.31
3dfz_A	223	SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase	95.3
2nvu_B	805	Maltose binding protein/NEDD8-activating enzyme E1	95.29
2xxj_A	310	L-LDH, L-lactate dehydrogenase; oxidoreductase, hy	95.26
4a5o_A	286	Bifunctional protein fold; oxidoreductase, hydrola	95.26
2v6b_A	304	L-LDH, L-lactate dehydrogenase; oxidoreductase, ra	95.25
2dpo_A	319	L-gulonate 3-dehydrogenase; structural genomics, N	95.25
3njr_A	204	Precorrin-6Y methylase; methyltransferase, decarbo	95.24
1ur5_A	309	Malate dehydrogenase; oxidoreductase, tricarboxyli	95.19
3aoe_E	419	Glutamate dehydrogenase; rossmann fold, NADH, oxid	95.15
1y6j_A	318	L-lactate dehydrogenase; southeast collaboratory f	95.15
4e21_A	358	6-phosphogluconate dehydrogenase (decarboxylating;	95.15
3l07_A	285	Bifunctional protein fold; structural genomics, ID	95.13
2f1k_A	279	Prephenate dehydrogenase; tyrosine synthesis, X-RA	95.12

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=100.00  E-value=1.1e-51  Score=365.17  Aligned_cols=242  Identities=21%  Similarity=0.224  Sum_probs=216.5

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHh
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHS  110 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  110 (336)
                      +||+||++|||||++|||+++|++|+++|++|++++|++++++++.+++++.  +.++.++++|++++++++++++++.+
T Consensus         3 ~sL~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~--g~~~~~~~~Dvt~~~~v~~~~~~~~~   80 (254)
T 4fn4_A            3 QSLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGM--GKEVLGVKADVSKKKDVEEFVRRTFE   80 (254)
T ss_dssp             GGGTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            5799999999999999999999999999999999999999999999999876  67899999999999999999999999


Q ss_pred             cCCCccEEEEcccCCCC---CCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcc
Q 019722          111 LNLPLNLLINNAGKFAH---QHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMI  187 (336)
Q Consensus       111 ~~~~id~lv~nAg~~~~---~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~  187 (336)
                      +||+||+||||||+...   ..+.+.++|++++++|+.|+|+++|+++|+|++++     .|+|||+||.++..+     
T Consensus        81 ~~G~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~-----~G~IVnisS~~g~~~-----  150 (254)
T 4fn4_A           81 TYSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQG-----KGVIVNTASIAGIRG-----  150 (254)
T ss_dssp             HHSCCCEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-----CEEEEEECCGGGTCS-----
T ss_pred             HcCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-----CcEEEEEechhhcCC-----
Confidence            99999999999997643   26789999999999999999999999999999876     599999999998876     


Q ss_pred             cccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchh----HHHHHHHH-HH
Q 019722          188 RYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGF----ITDLVFFL-TS  262 (336)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~----~~~~~~~~-~~  262 (336)
                                  .+....|++||+++.+|+|+||.|++++|  ||||+|+||+|+|+|.......    ........ +.
T Consensus       151 ------------~~~~~~Y~asKaal~~ltr~lA~ela~~g--IrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~  216 (254)
T 4fn4_A          151 ------------GFAGAPYTVAKHGLIGLTRSIAAHYGDQG--IRAVAVLPGTVKTNIGLGSSKPSELGMRTLTKLMSLS  216 (254)
T ss_dssp             ------------SSSCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCSSCTTSCSSCCHHHHHHHHHHHTTC
T ss_pred             ------------CCCChHHHHHHHHHHHHHHHHHHHhhhhC--eEEEEEEeCCCCCcccccccCCcHHHHHHHHhcCCCC
Confidence                        67788999999999999999999999998  9999999999999997665321    12222222 33


Q ss_pred             hhcCChHHHHHHHHHHHhcCccccCCceeeccCcccc
Q 019722          263 KLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAW  299 (336)
Q Consensus       263 ~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  299 (336)
                      .+...|+|+|.+++||++ +.++|+||+.+.+||+..
T Consensus       217 ~R~g~pediA~~v~fLaS-d~a~~iTG~~i~VDGG~t  252 (254)
T 4fn4_A          217 SRLAEPEDIANVIVFLAS-DEASFVNGDAVVVDGGLT  252 (254)
T ss_dssp             CCCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTGG
T ss_pred             CCCcCHHHHHHHHHHHhC-chhcCCcCCEEEeCCCcc
Confidence            677899999999999997 889999999999999854

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=100.00  E-value=5.3e-52  Score=367.48  Aligned_cols=244  Identities=20%  Similarity=0.242  Sum_probs=220.6

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      +++|+||++|||||++|||+++|+.|+++|++|++++|+.+.+++..+++++.  +.++.++++|++++++++++++++.
T Consensus         4 ~f~L~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~--g~~~~~~~~Dv~~~~~v~~~~~~~~   81 (255)
T 4g81_D            4 LFDLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRK--GYDAHGVAFDVTDELAIEAAFSKLD   81 (255)
T ss_dssp             TTCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHT--TCCEEECCCCTTCHHHHHHHHHHHH
T ss_pred             CcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEeeCCCHHHHHHHHHHHH
Confidence            78999999999999999999999999999999999999999999999999876  6789999999999999999999999


Q ss_pred             hcCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcc
Q 019722          110 SLNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMI  187 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~  187 (336)
                      +.+|+||+||||||+....  .+.+.++|++++++|+.|+|+++|+++|+|.++..    +|+|||+||..+..+     
T Consensus        82 ~~~G~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~----~G~IVnisS~~~~~~-----  152 (255)
T 4g81_D           82 AEGIHVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNS----GGKIINIGSLTSQAA-----  152 (255)
T ss_dssp             HTTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC----CEEEEEECCGGGTSB-----
T ss_pred             HHCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccC----CCEEEEEeehhhcCC-----
Confidence            9999999999999976654  68899999999999999999999999999977532    589999999998876     


Q ss_pred             cccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccc---hhHHHHHHHHHHhh
Q 019722          188 RYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRERE---GFITDLVFFLTSKL  264 (336)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~---~~~~~~~~~~~~~~  264 (336)
                                  .+....|++||+++.+|+|++|.|+++.|  ||||+|+||+|+|+|.+...   ..........+..+
T Consensus       153 ------------~~~~~~Y~asKaal~~ltr~lA~ela~~g--IrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~Pl~R  218 (255)
T 4g81_D          153 ------------RPTVAPYTAAKGGIKMLTCSMAAEWAQFN--IQTNAIGPGYILTDMNTALIEDKQFDSWVKSSTPSQR  218 (255)
T ss_dssp             ------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCGGGHHHHTCHHHHHHHHHHSTTCS
T ss_pred             ------------CCCchhHHHHHHHHHHHHHHHHHHhcccC--eEEEEEeeCCCCCchhhcccCCHHHHHHHHhCCCCCC
Confidence                        77888999999999999999999999998  99999999999999987642   22233344566778


Q ss_pred             cCChHHHHHHHHHHHhcCccccCCceeeccCcccc
Q 019722          265 LKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAW  299 (336)
Q Consensus       265 ~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  299 (336)
                      ...|+|+|..++||++ +.++|+||+.+.+||+..
T Consensus       219 ~g~pediA~~v~fL~S-~~a~~iTG~~i~VDGG~~  252 (255)
T 4g81_D          219 WGRPEELIGTAIFLSS-KASDYINGQIIYVDGGWL  252 (255)
T ss_dssp             CBCGGGGHHHHHHHHS-GGGTTCCSCEEEESTTGG
T ss_pred             CcCHHHHHHHHHHHhC-chhCCCcCCEEEECCCeE
Confidence            8999999999999997 889999999999999853

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=100.00  E-value=9.9e-50  Score=356.07  Aligned_cols=235  Identities=23%  Similarity=0.251  Sum_probs=205.9

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcC
Q 019722           33 LSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLN  112 (336)
Q Consensus        33 l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  112 (336)
                      |+||+||||||++|||+++|++|+++|++|++++|+.+.+++..+++     +.++.++++|++|+++++++++++.+.+
T Consensus        27 L~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~-----g~~~~~~~~Dv~~~~~v~~~~~~~~~~~  101 (273)
T 4fgs_A           27 LNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEI-----GGGAVGIQADSANLAELDRLYEKVKAEA  101 (273)
T ss_dssp             TTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----CTTCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             hCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc-----CCCeEEEEecCCCHHHHHHHHHHHHHHc
Confidence            99999999999999999999999999999999999999988887776     5688999999999999999999999999


Q ss_pred             CCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccccc
Q 019722          113 LPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYL  190 (336)
Q Consensus       113 ~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~  190 (336)
                      |+||+||||||+....  .+.+.++|++++++|+.|+|+++|+++|+|++       +|+||++||.++..+        
T Consensus       102 G~iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~-------~G~IInisS~~~~~~--------  166 (273)
T 4fgs_A          102 GRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLAR-------GSSVVLTGSTAGSTG--------  166 (273)
T ss_dssp             SCEEEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE-------EEEEEEECCGGGGSC--------
T ss_pred             CCCCEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhh-------CCeEEEEeehhhccC--------
Confidence            9999999999976543  78899999999999999999999999999964       379999999988876        


Q ss_pred             ccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccch--------hHHHHHHHHHH
Q 019722          191 GQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREG--------FITDLVFFLTS  262 (336)
Q Consensus       191 ~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~--------~~~~~~~~~~~  262 (336)
                               .+....|++||+++.+|+|+++.|+++.|  ||||+|+||+|+|++..+...        .........+.
T Consensus       167 ---------~~~~~~Y~asKaav~~ltr~lA~Ela~~g--IrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~Pl  235 (273)
T 4fgs_A          167 ---------TPAFSVYAASKAALRSFARNWILDLKDRG--IRINTLSPGPTETTGLVELAGKDPVQQQGLLNALAAQVPM  235 (273)
T ss_dssp             ---------CTTCHHHHHHHHHHHHHHHHHHHHTTTSC--EEEEEEEECSBCC---------CHHHHHHHHHHHHHHSTT
T ss_pred             ---------CCCchHHHHHHHHHHHHHHHHHHHhcccC--eEEEEEeeCCCCChhHHHhhccCchhhHHHHHHHHhcCCC
Confidence                     77888999999999999999999999988  999999999999998776531        12233344566


Q ss_pred             hhcCChHHHHHHHHHHHhcCccccCCceeeccCcccc
Q 019722          263 KLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAW  299 (336)
Q Consensus       263 ~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  299 (336)
                      .+...|+|+|.+++||++ +.++|+||+.+.+||+..
T Consensus       236 gR~g~peeiA~~v~FLaS-d~a~~iTG~~i~VDGG~s  271 (273)
T 4fgs_A          236 GRVGRAEEVAAAALFLAS-DDSSFVTGAELFVDGGSA  271 (273)
T ss_dssp             SSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTTT
T ss_pred             CCCcCHHHHHHHHHHHhC-chhcCccCCeEeECcChh
Confidence            778899999999999997 889999999999999753

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=100.00  E-value=1.1e-49  Score=349.52  Aligned_cols=237  Identities=22%  Similarity=0.253  Sum_probs=206.2

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      .++|+||++|||||++|||+++|+.|+++|++|++++|+..  ++..+++++.  +.++.++++|++|+.+++.+++   
T Consensus         4 ~f~L~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~--~~~~~~~~~~--g~~~~~~~~Dv~d~~~v~~~~~---   76 (247)
T 4hp8_A            4 PFSLEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAP--DETLDIIAKD--GGNASALLIDFADPLAAKDSFT---   76 (247)
T ss_dssp             TTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCC--HHHHHHHHHT--TCCEEEEECCTTSTTTTTTSST---
T ss_pred             CcCCCCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcH--HHHHHHHHHh--CCcEEEEEccCCCHHHHHHHHH---
Confidence            57899999999999999999999999999999999999864  3455566555  6789999999999998877663   


Q ss_pred             hcCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcc
Q 019722          110 SLNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMI  187 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~  187 (336)
                        +++||+||||||+....  .+.+.++|++++++|+.|+|+++|+++|+|.++++    .|+|||+||..+..+     
T Consensus        77 --~g~iDiLVNNAGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~----~G~IVnisS~~~~~g-----  145 (247)
T 4hp8_A           77 --DAGFDILVNNAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGR----SGKVVNIASLLSFQG-----  145 (247)
T ss_dssp             --TTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC----CEEEEEECCGGGTSC-----
T ss_pred             --hCCCCEEEECCCCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCC----CcEEEEEechhhCCC-----
Confidence              58999999999986553  67899999999999999999999999999987642    589999999998876     


Q ss_pred             cccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccch---hHHHHHHHHHHhh
Q 019722          188 RYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREG---FITDLVFFLTSKL  264 (336)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~---~~~~~~~~~~~~~  264 (336)
                                  .+....|++||+++.+|+|++|.|++++|  ||||+|+||+++|+|.+....   .........+..+
T Consensus       146 ------------~~~~~~Y~asKaav~~ltr~lA~Ela~~g--IrVNaV~PG~i~T~~~~~~~~~~~~~~~~~~~~PlgR  211 (247)
T 4hp8_A          146 ------------GIRVPSYTAAKHGVAGLTKLLANEWAAKG--INVNAIAPGYIETNNTEALRADAARNKAILERIPAGR  211 (247)
T ss_dssp             ------------CSSCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCSGGGHHHHTSHHHHHHHHTTCTTSS
T ss_pred             ------------CCCChHHHHHHHHHHHHHHHHHHHHhhcC--eEEEEEeeCCCCCcchhhcccCHHHHHHHHhCCCCCC
Confidence                        67788999999999999999999999998  999999999999999876432   2233344556778


Q ss_pred             cCChHHHHHHHHHHHhcCccccCCceeeccCcccc
Q 019722          265 LKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAW  299 (336)
Q Consensus       265 ~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  299 (336)
                      ...|+|+|..++||++ +.++|+||+.+.+||+..
T Consensus       212 ~g~peeiA~~v~fLaS-d~a~~iTG~~i~VDGG~~  245 (247)
T 4hp8_A          212 WGHSEDIAGAAVFLSS-AAADYVHGAILNVDGGWL  245 (247)
T ss_dssp             CBCTHHHHHHHHHHTS-GGGTTCCSCEEEESTTGG
T ss_pred             CcCHHHHHHHHHHHhC-chhcCCcCCeEEECcccc
Confidence            8999999999999997 889999999999999853

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=100.00  E-value=9.4e-49  Score=347.95  Aligned_cols=240  Identities=26%  Similarity=0.261  Sum_probs=206.8

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHh
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHS  110 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  110 (336)
                      ++|+||++|||||++|||+++|++|+++|++|++++|+.+..+ ..+++.+.  +.++.++++|++++++++++++++.+
T Consensus         3 ~~L~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~-~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~v~~~~~   79 (258)
T 4gkb_A            3 LNLQDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGA-FLDALAQR--QPRATYLPVELQDDAQCRDAVAQTIA   79 (258)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHH-HHHHHHHH--CTTCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHH-HHHHHHhc--CCCEEEEEeecCCHHHHHHHHHHHHH
Confidence            5799999999999999999999999999999999999877643 34555555  56899999999999999999999999


Q ss_pred             cCCCccEEEEcccCCCCC-CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcccc
Q 019722          111 LNLPLNLLINNAGKFAHQ-HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRY  189 (336)
Q Consensus       111 ~~~~id~lv~nAg~~~~~-~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~  189 (336)
                      .||+||+||||||+.... .+.+.++|++.+++|+.++|.++|+++|+|+++      +|+|||+||..+..+       
T Consensus        80 ~~G~iDiLVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~------~G~IVnisS~~~~~~-------  146 (258)
T 4gkb_A           80 TFGRLDGLVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKAT------RGAIVNISSKTAVTG-------  146 (258)
T ss_dssp             HHSCCCEEEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH------TCEEEEECCTHHHHC-------
T ss_pred             HhCCCCEEEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc------CCeEEEEeehhhccC-------
Confidence            999999999999976543 567889999999999999999999999999765      489999999998877       


Q ss_pred             cccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccch-------hHHHHHHHHHH
Q 019722          190 LGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREG-------FITDLVFFLTS  262 (336)
Q Consensus       190 ~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~-------~~~~~~~~~~~  262 (336)
                                .+....|++||+++.+|+|+++.|+++.|  ||||+|+||+|+|+|.+....       ...+.....+.
T Consensus       147 ----------~~~~~~Y~asKaav~~ltr~lA~ela~~g--IrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl  214 (258)
T 4gkb_A          147 ----------QGNTSGYCASKGAQLALTREWAVALREHG--VRVNAVIPAEVMTPLYRNWIATFEDPEAKLAEIAAKVPL  214 (258)
T ss_dssp             ----------CSSCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECSBCCSCC-----------CHHHHHHTTCTT
T ss_pred             ----------CCCchHHHHHHHHHHHHHHHHHHHhcccC--eEEEEEecCCCCChhHhhhhhcccChHHHHHHHHhcCCC
Confidence                      77788999999999999999999999998  999999999999999876421       11222222333


Q ss_pred             -hhcCChHHHHHHHHHHHhcCccccCCceeeccCcccc
Q 019722          263 -KLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAW  299 (336)
Q Consensus       263 -~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  299 (336)
                       ++...|+|+|..++||++ +.++|+||+.+.+||+..
T Consensus       215 g~R~g~peeiA~~v~fLaS-~~a~~iTG~~i~VDGG~T  251 (258)
T 4gkb_A          215 GRRFTTPDEIADTAVFLLS-PRASHTTGEWLFVDGGYT  251 (258)
T ss_dssp             TTSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTTT
T ss_pred             CCCCcCHHHHHHHHHHHhC-chhcCccCCeEEECCCcc
Confidence             467899999999999997 889999999999999864

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=100.00  E-value=3.9e-49  Score=345.33  Aligned_cols=228  Identities=22%  Similarity=0.236  Sum_probs=198.6

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcC
Q 019722           33 LSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLN  112 (336)
Q Consensus        33 l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  112 (336)
                      |+||++|||||++|||+++|++|+++|++|++++|+.+.+++        ..+.++..+++|++|+++++++++    .+
T Consensus         9 f~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~--------~~~~~~~~~~~Dv~~~~~v~~~~~----~~   76 (242)
T 4b79_A            9 YAGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHA--------PRHPRIRREELDITDSQRLQRLFE----AL   76 (242)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTS--------CCCTTEEEEECCTTCHHHHHHHHH----HC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhh--------hhcCCeEEEEecCCCHHHHHHHHH----hc
Confidence            599999999999999999999999999999999999765432        115689999999999999988775    47


Q ss_pred             CCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccccccc
Q 019722          113 LPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQ  192 (336)
Q Consensus       113 ~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~~  192 (336)
                      ++||+||||||+..+..+.+.++|++++++|+.|+|+++|+++|+|+++      +|+|||+||..+..+          
T Consensus        77 g~iDiLVNNAGi~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~------~G~IVnisS~~~~~~----------  140 (242)
T 4b79_A           77 PRLDVLVNNAGISRDREEYDLATFERVLRLNLSAAMLASQLARPLLAQR------GGSILNIASMYSTFG----------  140 (242)
T ss_dssp             SCCSEEEECCCCCCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHH------CEEEEEECCGGGTSC----------
T ss_pred             CCCCEEEECCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc------CCeEEEEeeccccCC----------
Confidence            8999999999988776888999999999999999999999999999765      489999999998876          


Q ss_pred             ccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccc---hhHHHHHHHHHHhhcCChH
Q 019722          193 ISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRERE---GFITDLVFFLTSKLLKTIP  269 (336)
Q Consensus       193 ~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~---~~~~~~~~~~~~~~~~~~~  269 (336)
                             .+....|++||+++.+|+|+|+.|++++|  ||||+|+||+++|+|.+...   +.........+..+...|+
T Consensus       141 -------~~~~~~Y~asKaav~~ltr~lA~Ela~~g--IrVNaV~PG~i~T~m~~~~~~~~~~~~~~~~~~PlgR~g~pe  211 (242)
T 4b79_A          141 -------SADRPAYSASKGAIVQLTRSLACEYAAER--IRVNAIAPGWIDTPLGAGLKADVEATRRIMQRTPLARWGEAP  211 (242)
T ss_dssp             -------CSSCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCC-----CCCHHHHHHHHHTCTTCSCBCHH
T ss_pred             -------CCCCHHHHHHHHHHHHHHHHHHHHhhhcC--eEEEEEEeCCCCChhhhcccCCHHHHHHHHhcCCCCCCcCHH
Confidence                   77788999999999999999999999998  99999999999999987753   2334444556677889999


Q ss_pred             HHHHHHHHHHhcCccccCCceeeccCccc
Q 019722          270 QGAATTCYVAIHPRLVNVSGKYFADCNEA  298 (336)
Q Consensus       270 ~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  298 (336)
                      |+|..++||++ +.++|+||+.+.+||+.
T Consensus       212 eiA~~v~fLaS-d~a~~iTG~~l~VDGG~  239 (242)
T 4b79_A          212 EVASAAAFLCG-PGASFVTGAVLAVDGGY  239 (242)
T ss_dssp             HHHHHHHHHTS-GGGTTCCSCEEEESTTG
T ss_pred             HHHHHHHHHhC-chhcCccCceEEECccH
Confidence            99999999997 88999999999999974

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=100.00  E-value=3.7e-47  Score=334.86  Aligned_cols=229  Identities=18%  Similarity=0.235  Sum_probs=201.8

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCCC
Q 019722           35 SVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLP  114 (336)
Q Consensus        35 gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  114 (336)
                      +|+||||||++|||+++|++|+++|++|++++|+++.+++..+    +  ..++.++++|++|+++++++++++.+.+|+
T Consensus         2 nK~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~----~--~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~   75 (247)
T 3ged_A            2 NRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAK----E--RPNLFYFHGDVADPLTLKKFVEYAMEKLQR   75 (247)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHT----T--CTTEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----h--cCCEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            4999999999999999999999999999999999877665443    3  457999999999999999999999999999


Q ss_pred             ccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccccccc
Q 019722          115 LNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQ  192 (336)
Q Consensus       115 id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~~  192 (336)
                      ||+||||||+....  .+.+.++|++++++|+.|+|+++|++.|+|+++      +|+|||+||..+..+          
T Consensus        76 iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~------~G~IInisS~~~~~~----------  139 (247)
T 3ged_A           76 IDVLVNNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKN------KGRIINIASTRAFQS----------  139 (247)
T ss_dssp             CCEEEECCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT------TCEEEEECCGGGTSC----------
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc------CCcEEEEeecccccC----------
Confidence            99999999976554  678899999999999999999999999999876      389999999988876          


Q ss_pred             ccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHHHHHHHHhhcCChHHHH
Q 019722          193 ISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSKLLKTIPQGA  272 (336)
Q Consensus       193 ~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~a  272 (336)
                             .+....|++||+++.+|+|+||.|+++ +  ||||+|+||+++|++..+..   .+.....+..+...|+|+|
T Consensus       140 -------~~~~~~Y~asKaal~~ltk~lA~ela~-~--IrVN~I~PG~i~t~~~~~~~---~~~~~~~Pl~R~g~pediA  206 (247)
T 3ged_A          140 -------EPDSEAYASAKGGIVALTHALAMSLGP-D--VLVNCIAPGWINVTEQQEFT---QEDCAAIPAGKVGTPKDIS  206 (247)
T ss_dssp             -------CTTCHHHHHHHHHHHHHHHHHHHHHTT-T--SEEEEEEECSBCCCC---CC---HHHHHTSTTSSCBCHHHHH
T ss_pred             -------CCCCHHHHHHHHHHHHHHHHHHHHHCC-C--CEEEEEecCcCCCCCcHHHH---HHHHhcCCCCCCcCHHHHH
Confidence                   777889999999999999999999986 6  99999999999999877643   3444566778889999999


Q ss_pred             HHHHHHHhcCccccCCceeeccCcccccc
Q 019722          273 ATTCYVAIHPRLVNVSGKYFADCNEAWTS  301 (336)
Q Consensus       273 ~~~~~l~~~~~~~~~~G~~~~~~~~~~~~  301 (336)
                      .+++||++ +  +|+||+.+.+||+....
T Consensus       207 ~~v~fL~s-~--~~iTG~~i~VDGG~s~r  232 (247)
T 3ged_A          207 NMVLFLCQ-Q--DFITGETIIVDGGMSKR  232 (247)
T ss_dssp             HHHHHHHH-C--SSCCSCEEEESTTGGGC
T ss_pred             HHHHHHHh-C--CCCCCCeEEECcCHHHh
Confidence            99999997 2  69999999999986543

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=100.00  E-value=4.3e-47  Score=338.44  Aligned_cols=243  Identities=19%  Similarity=0.141  Sum_probs=214.6

Q ss_pred             CCCCCCCEEEEeCCCC--hHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATS--GIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQ  107 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~--gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~  107 (336)
                      |++|+||++|||||+|  |||+++|++|+++|++|++++|+++.++++.+.+++.. +.++.++++|+++++++++++++
T Consensus         1 M~~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~   79 (256)
T 4fs3_A            1 MLNLENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLN-QPEAHLYQIDVQSDEEVINGFEQ   79 (256)
T ss_dssp             CCCCTTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGT-CSSCEEEECCTTCHHHHHHHHHH
T ss_pred             CcCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC-CCcEEEEEccCCCHHHHHHHHHH
Confidence            6899999999999875  99999999999999999999999998888887777653 45899999999999999999999


Q ss_pred             HHhcCCCccEEEEcccCCCCC------CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCcccc
Q 019722          108 FHSLNLPLNLLINNAGKFAHQ------HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSW  181 (336)
Q Consensus       108 ~~~~~~~id~lv~nAg~~~~~------~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~  181 (336)
                      +.+.+|++|+||||||+....      .+.+.++|+..+++|+.+++.+++++.+++++       +|+|||+||.++..
T Consensus        80 ~~~~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~-------~G~IVnisS~~~~~  152 (256)
T 4fs3_A           80 IGKDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPE-------GGSIVATTYLGGEF  152 (256)
T ss_dssp             HHHHHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTT-------CEEEEEEECGGGTS
T ss_pred             HHHHhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhcc-------CCEEEEEecccccc
Confidence            999999999999999975431      45677889999999999999999999987754       48999999998887


Q ss_pred             ccCCcccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccch---hHHHHHH
Q 019722          182 FSGDMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREG---FITDLVF  258 (336)
Q Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~---~~~~~~~  258 (336)
                      +                 .+++..|++||+++.+|+|+|+.|++++|  ||||+|+||+++|++.+....   .......
T Consensus       153 ~-----------------~~~~~~Y~asKaal~~ltr~lA~Ela~~g--IrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~  213 (256)
T 4fs3_A          153 A-----------------VQNYNVMGVAKASLEANVKYLALDLGPDN--IRVNAISAGPIRTLSAKGVGGFNTILKEIKE  213 (256)
T ss_dssp             C-----------------CTTTHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCCCSGGGTTCTTHHHHHHHHHH
T ss_pred             C-----------------cccchhhHHHHHHHHHHHHHHHHHhCccC--eEEEEEecCCCCChhhhhccCCHHHHHHHHh
Confidence            6                 77888999999999999999999999998  999999999999999887642   3344445


Q ss_pred             HHHHhhcCChHHHHHHHHHHHhcCccccCCceeeccCccccc
Q 019722          259 FLTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWT  300 (336)
Q Consensus       259 ~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~  300 (336)
                      ..+..+..+|+|+|.+++||++ +.++|+||+.+.+||+...
T Consensus       214 ~~Pl~R~g~peevA~~v~fL~S-d~a~~iTG~~i~VDGG~~a  254 (256)
T 4fs3_A          214 RAPLKRNVDQVEVGKTAAYLLS-DLSSGVTGENIHVDSGFHA  254 (256)
T ss_dssp             HSTTSSCCCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTGGG
T ss_pred             cCCCCCCcCHHHHHHHHHHHhC-chhcCccCCEEEECcCHHh
Confidence            5667788999999999999997 8899999999999998643

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=100.00  E-value=4.8e-47  Score=337.88  Aligned_cols=233  Identities=19%  Similarity=0.202  Sum_probs=200.0

Q ss_pred             CCCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHH
Q 019722           29 GCPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQF  108 (336)
Q Consensus        29 ~~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~  108 (336)
                      +.++|+||++|||||++|||+++|++|+++|++|++++|+..+.            ..+..++++|++++++++.+++++
T Consensus         5 dl~~L~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~------------~~~~~~~~~Dv~~~~~v~~~~~~~   72 (261)
T 4h15_A            5 EFLNLRGKRALITAGTKGAGAATVSLFLELGAQVLTTARARPEG------------LPEELFVEADLTTKEGCAIVAEAT   72 (261)
T ss_dssp             CCCCCTTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCTT------------SCTTTEEECCTTSHHHHHHHHHHH
T ss_pred             hccCCCCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchhC------------CCcEEEEEcCCCCHHHHHHHHHHH
Confidence            36789999999999999999999999999999999999985421            234457899999999999999999


Q ss_pred             HhcCCCccEEEEcccCCCC----CCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccC
Q 019722          109 HSLNLPLNLLINNAGKFAH----QHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSG  184 (336)
Q Consensus       109 ~~~~~~id~lv~nAg~~~~----~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~  184 (336)
                      .+++|++|+||||||+...    ..+.+.++|++++++|+.++++++|+++|+|++++     .|+||++||..+..+  
T Consensus        73 ~~~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~-----~G~Iv~isS~~~~~~--  145 (261)
T 4h15_A           73 RQRLGGVDVIVHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARG-----SGVVVHVTSIQRVLP--  145 (261)
T ss_dssp             HHHTSSCSEEEECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-----CEEEEEECCGGGTSC--
T ss_pred             HHHcCCCCEEEECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcC-----CceEEEEEehhhccC--
Confidence            9999999999999997542    26788999999999999999999999999999876     589999999988765  


Q ss_pred             CcccccccccCCCCCCC-hhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchh-----------
Q 019722          185 DMIRYLGQISRNKSHYD-ATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGF-----------  252 (336)
Q Consensus       185 ~~~~~~~~~~~~~~~~~-~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~-----------  252 (336)
                                     .+ +...|++||+++.+|+|+++.|++++|  ||||+|+||+|+|++.......           
T Consensus       146 ---------------~~~~~~~Y~asKaal~~lt~~lA~Ela~~g--IrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~  208 (261)
T 4h15_A          146 ---------------LPESTTAYAAAKAALSTYSKAMSKEVSPKG--VRVVRVSPGWIETEASVRLAERLAKQAGTDLEG  208 (261)
T ss_dssp             ---------------CTTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCBCCHHHHHHHHHHHHHTTCCHHH
T ss_pred             ---------------CCCccHHHHHHHHHHHHHHHHHHHHhhhhC--eEEEEEeCCCcCCcchhhhhHHHHHhhccchhh
Confidence                           33 567899999999999999999999998  9999999999999987653211           


Q ss_pred             HHHHH----HHHHHhhcCChHHHHHHHHHHHhcCccccCCceeeccCccc
Q 019722          253 ITDLV----FFLTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEA  298 (336)
Q Consensus       253 ~~~~~----~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  298 (336)
                      ..+..    ...+..+...|+|+|..++||++ +.++|+||+.+.+||+.
T Consensus       209 ~~~~~~~~~~~~PlgR~g~peevA~~v~fLaS-~~a~~itG~~i~VDGG~  257 (261)
T 4h15_A          209 GKKIIMDGLGGIPLGRPAKPEEVANLIAFLAS-DRAASITGAEYTIDGGT  257 (261)
T ss_dssp             HHHHHHHHTTCCTTSSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTC
T ss_pred             HHHHHHHHhcCCCCCCCcCHHHHHHHHHHHhC-chhcCccCcEEEECCcC
Confidence            11111    12345677899999999999997 88999999999999974

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=100.00  E-value=2.6e-44  Score=322.11  Aligned_cols=246  Identities=20%  Similarity=0.194  Sum_probs=214.9

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      .++++||++|||||++|||++++++|+++|++|++++|+.+++++..+++....++.++.++++|++|+++++++++++.
T Consensus         3 ~~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   82 (265)
T 3lf2_A            3 PYDLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACE   82 (265)
T ss_dssp             CCCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHH
Confidence            46799999999999999999999999999999999999999999999998876666679999999999999999999999


Q ss_pred             hcCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcc
Q 019722          110 SLNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMI  187 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~  187 (336)
                      +.++++|+||||||+....  .+.+.++|++++++|+.+++.++++++|.|++++     .|+||++||..+..+     
T Consensus        83 ~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-----~g~iv~isS~~~~~~-----  152 (265)
T 3lf2_A           83 RTLGCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRA-----DAAIVCVNSLLASQP-----  152 (265)
T ss_dssp             HHHCSCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTST-----TEEEEEEEEGGGTSC-----
T ss_pred             HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccC-----CeEEEEECCcccCCC-----
Confidence            9999999999999986543  5788899999999999999999999999998765     589999999988776     


Q ss_pred             cccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccch----------hHHHHH
Q 019722          188 RYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREG----------FITDLV  257 (336)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~----------~~~~~~  257 (336)
                                  .+....|++||+++++|+++++.|+++.|  |+||+|+||+|+|++.+....          ......
T Consensus       153 ------------~~~~~~Y~asKaa~~~l~~~la~e~~~~g--i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~  218 (265)
T 3lf2_A          153 ------------EPHMVATSAARAGVKNLVRSMAFEFAPKG--VRVNGILIGLVESGQWRRRFEAREERELDWAQWTAQL  218 (265)
T ss_dssp             ------------CTTBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCHHHHHHHTC------CHHHHHHHH
T ss_pred             ------------CCCchhhHHHHHHHHHHHHHHHHHhcccC--eEEEEEEeCcCcCchhhhhhhhhhhhccCHHHHHHHH
Confidence                        67788999999999999999999999988  999999999999998654321          111111


Q ss_pred             HH---HHHhhcCChHHHHHHHHHHHhcCccccCCceeeccCccccc
Q 019722          258 FF---LTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWT  300 (336)
Q Consensus       258 ~~---~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~  300 (336)
                      ..   .+..+..+|+|+|.+++|+++ +.+.++||+.+.++|+...
T Consensus       219 ~~~~~~p~~r~~~pedvA~~v~fL~s-~~~~~itG~~i~vdGG~~~  263 (265)
T 3lf2_A          219 ARNKQIPLGRLGKPIEAARAILFLAS-PLSAYTTGSHIDVSGGLSR  263 (265)
T ss_dssp             HHHTTCTTCSCBCHHHHHHHHHHHHS-GGGTTCCSEEEEESSSCCC
T ss_pred             hhccCCCcCCCcCHHHHHHHHHHHhC-chhcCcCCCEEEECCCCcC
Confidence            11   344566799999999999997 7789999999999998643

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=100.00  E-value=2.7e-44  Score=323.03  Aligned_cols=243  Identities=20%  Similarity=0.265  Sum_probs=215.1

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      +++|+||++|||||++|||+++|++|+++|++|++++|+.+++++..++++..  +.++.++++|++++++++++++++.
T Consensus        21 ~~~l~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~   98 (271)
T 4ibo_A           21 IFDLGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNV--GHDAEAVAFDVTSESEIIEAFARLD   98 (271)
T ss_dssp             GGCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHT--TCCEEECCCCTTCHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHHH
Confidence            56899999999999999999999999999999999999999999998888765  5689999999999999999999999


Q ss_pred             hcCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcc
Q 019722          110 SLNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMI  187 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~  187 (336)
                      +.++++|+||||||+....  .+.+.++|++++++|+.+++.++++++|.|++++     .|+||++||..+..+     
T Consensus        99 ~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-----~g~iV~isS~~~~~~-----  168 (271)
T 4ibo_A           99 EQGIDVDILVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRG-----YGKIVNIGSLTSELA-----  168 (271)
T ss_dssp             HHTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-----CEEEEEECCGGGTSB-----
T ss_pred             HHCCCCCEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-----CcEEEEEccHHhCCC-----
Confidence            9999999999999976543  5678899999999999999999999999998875     589999999888766     


Q ss_pred             cccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccc---hhHHHHHHHHHHhh
Q 019722          188 RYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRERE---GFITDLVFFLTSKL  264 (336)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~---~~~~~~~~~~~~~~  264 (336)
                                  .++...|++||++++.|+++++.|+++.|  |+||+|+||+|+|++.+...   ..........+..+
T Consensus       169 ------------~~~~~~Y~asKaa~~~l~~~la~e~~~~g--I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r  234 (271)
T 4ibo_A          169 ------------RATVAPYTVAKGGIKMLTRAMAAEWAQYG--IQANAIGPGYMLTDMNQALIDNPEFDAWVKARTPAKR  234 (271)
T ss_dssp             ------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCSGGGHHHHHCHHHHHHHHHHSTTCS
T ss_pred             ------------CCCchhHHHHHHHHHHHHHHHHHHHhhhC--eEEEEEEeccEeCcchhhcccCHHHHHHHHhcCCCCC
Confidence                        66778999999999999999999999988  99999999999999976542   12222333445566


Q ss_pred             cCChHHHHHHHHHHHhcCccccCCceeeccCcccc
Q 019722          265 LKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAW  299 (336)
Q Consensus       265 ~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  299 (336)
                      ...|+|+|.+++|+++ +.+.+++|+.+.++|+..
T Consensus       235 ~~~pedva~~v~~L~s-~~~~~itG~~i~vdGG~~  268 (271)
T 4ibo_A          235 WGKPQELVGTAVFLSA-SASDYVNGQIIYVDGGML  268 (271)
T ss_dssp             CBCGGGGHHHHHHHHS-GGGTTCCSCEEEESTTGG
T ss_pred             CcCHHHHHHHHHHHhC-ccccCCCCcEEEECCCee
Confidence            7899999999999987 777899999999998754

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=100.00  E-value=1.4e-44  Score=324.13  Aligned_cols=256  Identities=26%  Similarity=0.292  Sum_probs=216.3

Q ss_pred             CCCccccccCCCCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCH
Q 019722           19 SKSTAEQVTDGCPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSL   98 (336)
Q Consensus        19 ~~~~~~~~~~~~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~   98 (336)
                      +-++..+...++++++||++|||||++|||++++++|+++|++|++++|+.+++++..+++.+.. +.++.++++|++|+
T Consensus         4 ~m~~~~~~~~~~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dv~~~   82 (266)
T 4egf_A            4 SMTTTDDRYAGVLRLDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQF-GTDVHTVAIDLAEP   82 (266)
T ss_dssp             ------CCBCGGGCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH-CCCEEEEECCTTST
T ss_pred             cccccchhcccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhc-CCcEEEEEecCCCH
Confidence            33444444455788999999999999999999999999999999999999999998888887633 56899999999999


Q ss_pred             HHHHHHHHHHHhcCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcC
Q 019722           99 SSVRNFVSQFHSLNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSS  176 (336)
Q Consensus        99 ~~v~~~~~~~~~~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS  176 (336)
                      ++++++++++.+.++++|+||||||+....  .+.+.++|++++++|+.+++.++++++|.|++++.    .|+||++||
T Consensus        83 ~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~----~g~iv~isS  158 (266)
T 4egf_A           83 DAPAELARRAAEAFGGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGE----GGAIITVAS  158 (266)
T ss_dssp             THHHHHHHHHHHHHTSCSEEEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTS----CEEEEEECC
T ss_pred             HHHHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC----CeEEEEEcc
Confidence            999999999999999999999999987543  56788999999999999999999999999988642    479999999


Q ss_pred             CccccccCCcccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccch---hH
Q 019722          177 SIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREG---FI  253 (336)
Q Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~---~~  253 (336)
                      ..+..+                 .+....|++||++++.|+++++.|+++.|  |+||+|+||+|.|++.+....   ..
T Consensus       159 ~~~~~~-----------------~~~~~~Y~asK~a~~~l~~~la~e~~~~g--I~vn~v~PG~v~T~~~~~~~~~~~~~  219 (266)
T 4egf_A          159 AAALAP-----------------LPDHYAYCTSKAGLVMATKVLARELGPHG--IRANSVCPTVVLTEMGQRVWGDEAKS  219 (266)
T ss_dssp             GGGTSC-----------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEESCBCSHHHHHHTCSHHHH
T ss_pred             hhhccC-----------------CCCChHHHHHHHHHHHHHHHHHHHHhhhC--eEEEEEEeCCCcCchhhhhccChHHH
Confidence            988765                 66778999999999999999999999988  999999999999998665321   12


Q ss_pred             HHHHHHHHHhhcCChHHHHHHHHHHHhcCccccCCceeeccCcccc
Q 019722          254 TDLVFFLTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAW  299 (336)
Q Consensus       254 ~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  299 (336)
                      .......+..+..+|+|+|.+++|+++ +.+.++||+.+.++|+..
T Consensus       220 ~~~~~~~p~~r~~~p~dva~~v~~L~s-~~~~~itG~~i~vdGG~~  264 (266)
T 4egf_A          220 APMIARIPLGRFAVPHEVSDAVVWLAS-DAASMINGVDIPVDGGYT  264 (266)
T ss_dssp             HHHHTTCTTSSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTGG
T ss_pred             HHHHhcCCCCCCcCHHHHHHHHHHHhC-chhcCccCcEEEECCCcc
Confidence            222223344566789999999999997 778899999999998754

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=100.00  E-value=4.1e-44  Score=317.77  Aligned_cols=240  Identities=26%  Similarity=0.339  Sum_probs=211.3

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      +++++||++|||||++|||++++++|+++|++|++++|+.+.+++..+++.     .+..++++|++|+++++++++++.
T Consensus         4 ~~~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~Dv~d~~~v~~~~~~~~   78 (248)
T 3op4_A            4 FMNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLG-----DNGKGMALNVTNPESIEAVLKAIT   78 (248)
T ss_dssp             TTCCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHG-----GGEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc-----ccceEEEEeCCCHHHHHHHHHHHH
Confidence            678999999999999999999999999999999999999998888777763     357889999999999999999999


Q ss_pred             hcCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcc
Q 019722          110 SLNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMI  187 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~  187 (336)
                      +.++++|+||||||+....  .+.+.++|++++++|+.+++.++++++|.|++++     .|+||++||..+..+     
T Consensus        79 ~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~-----~g~iv~isS~~~~~~-----  148 (248)
T 3op4_A           79 DEFGGVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKR-----QGRIINVGSVVGTMG-----  148 (248)
T ss_dssp             HHHCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-----CEEEEEECCHHHHHC-----
T ss_pred             HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-----CCEEEEEcchhhcCC-----
Confidence            9999999999999986543  5678899999999999999999999999998875     589999999888776     


Q ss_pred             cccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchh-HHHHHHHHHHhhcC
Q 019722          188 RYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGF-ITDLVFFLTSKLLK  266 (336)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~-~~~~~~~~~~~~~~  266 (336)
                                  .++...|++||++++.|+++++.|+++.|  |+||+|+||+++|++.+..... ........+..+..
T Consensus       149 ------------~~~~~~Y~asK~a~~~l~~~la~e~~~~g--i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~p~~r~~  214 (248)
T 3op4_A          149 ------------NAGQANYAAAKAGVIGFTKSMAREVASRG--VTVNTVAPGFIETDMTKALNDEQRTATLAQVPAGRLG  214 (248)
T ss_dssp             ------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBSSTTTTTSCHHHHHHHHHTCTTCSCB
T ss_pred             ------------CCCChHHHHHHHHHHHHHHHHHHHHHHhC--eEEEEEeeCCCCCchhhhcCHHHHHHHHhcCCCCCCc
Confidence                        67788999999999999999999999988  9999999999999998875432 22222334455677


Q ss_pred             ChHHHHHHHHHHHhcCccccCCceeeccCcccc
Q 019722          267 TIPQGAATTCYVAIHPRLVNVSGKYFADCNEAW  299 (336)
Q Consensus       267 ~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  299 (336)
                      .|+|+|.+++|+++ +.+.+++|+.+.++|+..
T Consensus       215 ~p~dva~~v~~L~s-~~~~~itG~~i~vdgG~~  246 (248)
T 3op4_A          215 DPREIASAVAFLAS-PEAAYITGETLHVNGGMY  246 (248)
T ss_dssp             CHHHHHHHHHHHHS-GGGTTCCSCEEEESTTSS
T ss_pred             CHHHHHHHHHHHcC-CccCCccCcEEEECCCee
Confidence            99999999999997 778899999999998753

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=100.00  E-value=4e-44  Score=320.40  Aligned_cols=246  Identities=22%  Similarity=0.266  Sum_probs=215.6

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      +++++||++|||||++|||++++++|+++|++|++++|+.+++++..++++... ..++.++++|++++++++++++++.
T Consensus         5 m~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~   83 (262)
T 3pk0_A            5 MFDLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLG-SGKVIGVQTDVSDRAQCDALAGRAV   83 (262)
T ss_dssp             TTCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTS-SSCEEEEECCTTSHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhC-CCcEEEEEcCCCCHHHHHHHHHHHH
Confidence            678999999999999999999999999999999999999999999888887652 3589999999999999999999999


Q ss_pred             hcCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccc-cccCCc
Q 019722          110 SLNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHS-WFSGDM  186 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~-~~~~~~  186 (336)
                      +.++++|+||||||+....  .+.+.++|++++++|+.+++.++++++|.|++++     .|+||++||..+. .+    
T Consensus        84 ~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-----~g~iv~isS~~~~~~~----  154 (262)
T 3pk0_A           84 EEFGGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASG-----SGRVVLTSSITGPITG----  154 (262)
T ss_dssp             HHHSCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHS-----SCEEEEECCSBTTTBC----
T ss_pred             HHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-----CcEEEEEechhhccCC----
Confidence            9999999999999976543  6778899999999999999999999999998875     5899999998875 44    


Q ss_pred             ccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccch-hHHHHHHHHHHhhc
Q 019722          187 IRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREG-FITDLVFFLTSKLL  265 (336)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~-~~~~~~~~~~~~~~  265 (336)
                                   .++...|++||++++.|+++++.|+++.|  |+||+|+||+|.|++...... .........+..+.
T Consensus       155 -------------~~~~~~Y~asK~a~~~l~~~la~e~~~~g--i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~r~  219 (262)
T 3pk0_A          155 -------------YPGWSHYGATKAAQLGFMRTAAIELAPHK--ITVNAIMPGNIMTEGLLENGEEYIASMARSIPAGAL  219 (262)
T ss_dssp             -------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECSBCCHHHHTTCHHHHHHHHTTSTTSSC
T ss_pred             -------------CCCChhhHHHHHHHHHHHHHHHHHHHhhC--cEEEEEEeCcCcCccccccCHHHHHHHHhcCCCCCC
Confidence                         56778999999999999999999999988  999999999999998765432 22222333445567


Q ss_pred             CChHHHHHHHHHHHhcCccccCCceeeccCcccccc
Q 019722          266 KTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWTS  301 (336)
Q Consensus       266 ~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~~  301 (336)
                      .+|+|+|.+++|+++ +.+.+++|+.+.++|+...+
T Consensus       220 ~~p~dva~~v~~L~s-~~~~~itG~~i~vdGG~~~~  254 (262)
T 3pk0_A          220 GTPEDIGHLAAFLAT-KEAGYITGQAIAVDGGQVLP  254 (262)
T ss_dssp             BCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTTTCC
T ss_pred             cCHHHHHHHHHHHhC-ccccCCcCCEEEECCCeecC
Confidence            799999999999997 77889999999999986554

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=100.00  E-value=5.7e-44  Score=322.33  Aligned_cols=251  Identities=24%  Similarity=0.228  Sum_probs=213.1

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      +++++||++|||||++|||++++++|+++|++|++++|+.++++++.+++...  +.++.++++|++++++++++++++.
T Consensus         3 m~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~   80 (280)
T 3tox_A            3 MSRLEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGG--GGEAAALAGDVGDEALHEALVELAV   80 (280)
T ss_dssp             -CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTT--TCCEEECCCCTTCHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHHHHHHHHH
Confidence            56799999999999999999999999999999999999999999888888654  5789999999999999999999999


Q ss_pred             hcCCCccEEEEcccCCCC---CCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccc-cccCC
Q 019722          110 SLNLPLNLLINNAGKFAH---QHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHS-WFSGD  185 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~~---~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~-~~~~~  185 (336)
                      +.++++|+||||||+...   ..+.+.++|++++++|+.|++.++++++|.|++++     .|+||++||..+. .+   
T Consensus        81 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-----~g~iv~isS~~~~~~~---  152 (280)
T 3tox_A           81 RRFGGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALG-----GGSLTFTSSFVGHTAG---  152 (280)
T ss_dssp             HHHSCCCEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-----CEEEEEECCSBTTTBC---
T ss_pred             HHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-----CCEEEEEcChhhCcCC---
Confidence            999999999999997633   25778899999999999999999999999998865     5899999998876 33   


Q ss_pred             cccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCcc-----chhHHHHHHHH
Q 019722          186 MIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRER-----EGFITDLVFFL  260 (336)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~-----~~~~~~~~~~~  260 (336)
                                    .++...|++||++++.|+++++.|+++.|  |+||+|+||+|.|++....     ...........
T Consensus       153 --------------~~~~~~Y~asKaa~~~l~~~la~e~~~~g--Irvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~  216 (280)
T 3tox_A          153 --------------FAGVAPYAASKAGLIGLVQALAVELGARG--IRVNALLPGGTDTPANFANLPGAAPETRGFVEGLH  216 (280)
T ss_dssp             --------------CTTCHHHHHHHHHHHHHHHHHHHHHHTTT--EEEEEEEECSBSSTTSGGGSTTCCTHHHHHHHTTS
T ss_pred             --------------CCCchhHHHHHHHHHHHHHHHHHHhhhcC--eEEEEEEECCCCCchhhhhccccCHHHHHHHhccC
Confidence                          56778999999999999999999999888  9999999999999987652     11111122223


Q ss_pred             HHhhcCChHHHHHHHHHHHhcCccccCCceeeccCcccccccCCCCH
Q 019722          261 TSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWTSKLGSNS  307 (336)
Q Consensus       261 ~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~~~~~~~~  307 (336)
                      +..+..+|+|+|.+++|+++ +.+.++||+.+.++|+........++
T Consensus       217 p~~r~~~pedvA~~v~~L~s-~~a~~itG~~i~vdGG~~~~~~a~~~  262 (280)
T 3tox_A          217 ALKRIARPEEIAEAALYLAS-DGASFVTGAALLADGGASVTKAAENL  262 (280)
T ss_dssp             TTSSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTGGGCC-----
T ss_pred             ccCCCcCHHHHHHHHHHHhC-ccccCCcCcEEEECCCccccccccch
Confidence            34556789999999999997 77789999999999997776554443

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=100.00  E-value=4.3e-44  Score=320.85  Aligned_cols=257  Identities=23%  Similarity=0.307  Sum_probs=204.8

Q ss_pred             CCCCCCCCCccccccCCCCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEe
Q 019722           13 GASGYGSKSTAEQVTDGCPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLP   92 (336)
Q Consensus        13 ~~~~~~~~~~~~~~~~~~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~   92 (336)
                      ++++-.++.++..-+..+++++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++     +.++.+++
T Consensus         5 ~~~~~~~~~~~~~g~~~m~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~   79 (266)
T 3grp_A            5 HHHHMGTLEAQTQGPGSMFKLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADL-----GKDVFVFS   79 (266)
T ss_dssp             ----------------CTTCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----CSSEEEEE
T ss_pred             CccccccccCCCCCCcchhccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCceEEEE
Confidence            4455556666666666578899999999999999999999999999999999999998888776654     56899999


Q ss_pred             ccCCCHHHHHHHHHHHHhcCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCe
Q 019722           93 LDLSSLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGR  170 (336)
Q Consensus        93 ~Dl~~~~~v~~~~~~~~~~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~gr  170 (336)
                      +|++|+++++++++++.+.++++|+||||||+....  .+.+.++|++++++|+.+++.++++++|.|++++     .|+
T Consensus        80 ~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-----~g~  154 (266)
T 3grp_A           80 ANLSDRKSIKQLAEVAEREMEGIDILVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRR-----YGR  154 (266)
T ss_dssp             CCTTSHHHHHHHHHHHHHHHTSCCEEEECCCCC-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-----CEE
T ss_pred             eecCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-----CcE
Confidence            999999999999999999999999999999976543  5677899999999999999999999999998875     589


Q ss_pred             EEEEcCCccccccCCcccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccc
Q 019722          171 IVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRERE  250 (336)
Q Consensus       171 IV~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~  250 (336)
                      ||++||..+..+                 .++...|++||++++.|+++++.|+++.|  |+||+|+||+|+|++.+...
T Consensus       155 Iv~isS~~~~~~-----------------~~~~~~Y~asKaa~~~~~~~la~e~~~~g--I~vn~v~PG~v~t~~~~~~~  215 (266)
T 3grp_A          155 IINITSIVGVVG-----------------NPGQTNYCAAKAGLIGFSKALAQEIASRN--ITVNCIAPGFIKSAMTDKLN  215 (266)
T ss_dssp             EEEECCC------------------------CHHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCSHHHHTCC
T ss_pred             EEEECCHHHcCC-----------------CCCchhHHHHHHHHHHHHHHHHHHhhhhC--cEEEEEeeCcCCCchhhccC
Confidence            999999988776                 66788999999999999999999999988  99999999999999877654


Q ss_pred             hhH-HHHHHHHHHhhcCChHHHHHHHHHHHhcCccccCCceeeccCcccc
Q 019722          251 GFI-TDLVFFLTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAW  299 (336)
Q Consensus       251 ~~~-~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  299 (336)
                      ... .......+..+...|+|+|.+++|+++ +.+.+++|+.+.++|+..
T Consensus       216 ~~~~~~~~~~~p~~r~~~~edvA~~v~~L~s-~~~~~itG~~i~vdGG~~  264 (266)
T 3grp_A          216 EKQKEAIMAMIPMKRMGIGEEIAFATVYLAS-DEAAYLTGQTLHINGGMA  264 (266)
T ss_dssp             HHHHHHHHTTCTTCSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTC-
T ss_pred             HHHHHHHHhcCCCCCCcCHHHHHHHHHHHhC-ccccCccCCEEEECCCee
Confidence            322 222223445567789999999999997 777899999999998743

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=100.00  E-value=9e-44  Score=320.45  Aligned_cols=246  Identities=23%  Similarity=0.248  Sum_probs=215.0

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      .++++||++|||||++|||++++++|+++|++|++++|+.+.+++..+++...  +.++.++++|++|+++++++++++.
T Consensus        27 ~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~v~~~~~~~~  104 (276)
T 3r1i_A           27 LFDLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGV--GGKALPIRCDVTQPDQVRGMLDQMT  104 (276)
T ss_dssp             GGCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHT--TCCCEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEEcCCCCHHHHHHHHHHHH
Confidence            56899999999999999999999999999999999999999988888888765  5689999999999999999999999


Q ss_pred             hcCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcc
Q 019722          110 SLNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMI  187 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~  187 (336)
                      +.++++|+||||||+....  .+.+.++|++++++|+.+++.++++++|.|.+++.    +++||++||..+.....   
T Consensus       105 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~----~g~iv~isS~~~~~~~~---  177 (276)
T 3r1i_A          105 GELGGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGL----GGTIITTASMSGHIINI---  177 (276)
T ss_dssp             HHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTS----CEEEEEECCGGGTSCCC---
T ss_pred             HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC----CcEEEEECchHhcccCC---
Confidence            9999999999999986543  56788999999999999999999999999988642    37999999987765411   


Q ss_pred             cccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHHHHHHHHhhcCC
Q 019722          188 RYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSKLLKT  267 (336)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~  267 (336)
                                  .+....|++||++++.|+++++.|+++.|  |+||+|+||+|+|++.+.............+..+...
T Consensus       178 ------------~~~~~~Y~asKaa~~~l~~~la~e~~~~g--Irvn~v~PG~v~T~~~~~~~~~~~~~~~~~p~~r~~~  243 (276)
T 3r1i_A          178 ------------PQQVSHYCTSKAAVVHLTKAMAVELAPHQ--IRVNSVSPGYIRTELVEPLADYHALWEPKIPLGRMGR  243 (276)
T ss_dssp             ------------SSCCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCBCSTTTGGGGGGHHHHGGGSTTSSCBC
T ss_pred             ------------CCCcchHHHHHHHHHHHHHHHHHHHhhcC--cEEEEEeeCCCcCCccccchHHHHHHHhcCCCCCCcC
Confidence                        23567899999999999999999999988  9999999999999998876544443334445566789


Q ss_pred             hHHHHHHHHHHHhcCccccCCceeeccCcccc
Q 019722          268 IPQGAATTCYVAIHPRLVNVSGKYFADCNEAW  299 (336)
Q Consensus       268 ~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  299 (336)
                      |+|+|.+++|+++ +.+.++||+.+.++|+..
T Consensus       244 pedvA~~v~fL~s-~~~~~itG~~i~vdGG~~  274 (276)
T 3r1i_A          244 PEELTGLYLYLAS-AASSYMTGSDIVIDGGYT  274 (276)
T ss_dssp             GGGSHHHHHHHHS-GGGTTCCSCEEEESTTTT
T ss_pred             HHHHHHHHHHHcC-ccccCccCcEEEECcCcc
Confidence            9999999999997 778999999999998754

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=100.00  E-value=7.3e-44  Score=319.90  Aligned_cols=242  Identities=26%  Similarity=0.319  Sum_probs=211.9

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeC-ChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPAR-SLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQF  108 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~  108 (336)
                      .++++||++|||||++|||+++|++|+++|++|++++| +.+..++..++++..  +.++.++++|++|+++++++++++
T Consensus        23 ~~~l~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~d~~~v~~~~~~~  100 (269)
T 4dmm_A           23 ALPLTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAA--GGEAFAVKADVSQESEVEALFAAV  100 (269)
T ss_dssp             -CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCCEEEEECCTTSHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHHHHHHHH
Confidence            46789999999999999999999999999999999998 667777777777665  568999999999999999999999


Q ss_pred             HhcCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCc
Q 019722          109 HSLNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDM  186 (336)
Q Consensus       109 ~~~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~  186 (336)
                      .+.++++|+||||||+....  .+.+.++|++++++|+.|++.++++++|.|++++     .|+||++||.++..+    
T Consensus       101 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-----~g~iv~isS~~~~~~----  171 (269)
T 4dmm_A          101 IERWGRLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQR-----SGRIINIASVVGEMG----  171 (269)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-----CCEEEEECCHHHHHC----
T ss_pred             HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-----CcEEEEECchhhcCC----
Confidence            99999999999999987543  5678899999999999999999999999998875     589999999888776    


Q ss_pred             ccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHHHHHHHHhhcC
Q 019722          187 IRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSKLLK  266 (336)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~  266 (336)
                                   .++...|++||+++++|+++++.|+++.|  |+||+|+||+|+|++......  .......+..+..
T Consensus       172 -------------~~~~~~Y~asK~a~~~l~~~la~e~~~~g--i~vn~v~PG~v~T~~~~~~~~--~~~~~~~p~~r~~  234 (269)
T 4dmm_A          172 -------------NPGQANYSAAKAGVIGLTKTVAKELASRG--ITVNAVAPGFIATDMTSELAA--EKLLEVIPLGRYG  234 (269)
T ss_dssp             -------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECCBTTSCSCHHHH--HHHGGGCTTSSCB
T ss_pred             -------------CCCchhHHHHHHHHHHHHHHHHHHHhhhC--cEEEEEEECCCcCcccccccH--HHHHhcCCCCCCC
Confidence                         66778999999999999999999999988  999999999999999876321  2222334455678


Q ss_pred             ChHHHHHHHHHHHhcCccccCCceeeccCcccc
Q 019722          267 TIPQGAATTCYVAIHPRLVNVSGKYFADCNEAW  299 (336)
Q Consensus       267 ~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  299 (336)
                      .|+|+|.+++|+++.+.+.+++|+.+.++|+..
T Consensus       235 ~~~dvA~~v~~l~s~~~~~~itG~~i~vdGG~~  267 (269)
T 4dmm_A          235 EAAEVAGVVRFLAADPAAAYITGQVINIDGGLV  267 (269)
T ss_dssp             CHHHHHHHHHHHHHCGGGGGCCSCEEEESTTSC
T ss_pred             CHHHHHHHHHHHhCCcccCCCcCCEEEECCCee
Confidence            999999999999996688999999999998754

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=100.00  E-value=7.9e-44  Score=317.39  Aligned_cols=244  Identities=22%  Similarity=0.256  Sum_probs=213.5

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      .++++||++|||||++|||++++++|+++|++|++++|+.+.+++..++++..  +.++.++++|++|+++++++++++.
T Consensus         7 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~   84 (256)
T 3gaf_A            7 PFHLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQA--GGKAIGLECNVTDEQHREAVIKAAL   84 (256)
T ss_dssp             TTCCTTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHHHHHHHHH
Confidence            56799999999999999999999999999999999999999999888888765  5789999999999999999999999


Q ss_pred             hcCCCccEEEEcccCCCCC-CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccc
Q 019722          110 SLNLPLNLLINNAGKFAHQ-HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIR  188 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~~~-~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~  188 (336)
                      +.++++|+||||||+.... .+.+.++|++++++|+.+++.++++++|.|++++     .|+||++||..+..+      
T Consensus        85 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-----~g~iv~isS~~~~~~------  153 (256)
T 3gaf_A           85 DQFGKITVLVNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAG-----GGAILNISSMAGENT------  153 (256)
T ss_dssp             HHHSCCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-----CEEEEEECCGGGTCC------
T ss_pred             HHcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-----CcEEEEEcCHHHcCC------
Confidence            9999999999999976543 3678899999999999999999999999998865     589999999988765      


Q ss_pred             ccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccc--hhHHHHHHHHHHhhcC
Q 019722          189 YLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRERE--GFITDLVFFLTSKLLK  266 (336)
Q Consensus       189 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~--~~~~~~~~~~~~~~~~  266 (336)
                                 .++...|++||++++.|+++++.|+++.|  |+||+|+||+|+|++.+...  ..........+..+..
T Consensus       154 -----------~~~~~~Y~asKaa~~~~~~~la~e~~~~g--i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~p~~r~~  220 (256)
T 3gaf_A          154 -----------NVRMASYGSSKAAVNHLTRNIAFDVGPMG--IRVNAIAPGAIKTDALATVLTPEIERAMLKHTPLGRLG  220 (256)
T ss_dssp             -----------CTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCBCCHHHHHHCCHHHHHHHHTTCTTSSCB
T ss_pred             -----------CCCchHHHHHHHHHHHHHHHHHHHHhhhC--cEEEEEEEccccCchhhhccCHHHHHHHHhcCCCCCCC
Confidence                       66788999999999999999999999988  99999999999999876532  1222222233445667


Q ss_pred             ChHHHHHHHHHHHhcCccccCCceeeccCccccc
Q 019722          267 TIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWT  300 (336)
Q Consensus       267 ~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~  300 (336)
                      .|+|+|.+++|+++ +.+.+++|+.+.++|+...
T Consensus       221 ~~~dva~~~~~L~s-~~~~~itG~~i~vdgG~~~  253 (256)
T 3gaf_A          221 EAQDIANAALFLCS-PAAAWISGQVLTVSGGGVQ  253 (256)
T ss_dssp             CHHHHHHHHHHHHS-GGGTTCCSCEEEESTTSCC
T ss_pred             CHHHHHHHHHHHcC-CcccCccCCEEEECCCccc
Confidence            89999999999997 7788999999999987543

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=100.00  E-value=3.4e-43  Score=320.28  Aligned_cols=257  Identities=17%  Similarity=0.148  Sum_probs=208.6

Q ss_pred             CCCCCCccccccCCCCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCC------------hHHHHHHHHHHHhhC
Q 019722           16 GYGSKSTAEQVTDGCPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARS------------LKAAEEAKARLASDC   83 (336)
Q Consensus        16 ~~~~~~~~~~~~~~~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~------------~~~~~~~~~~l~~~~   83 (336)
                      |..|.++..+..- ..+++||++|||||++|||+++|++|+++|++|++++|+            .+.+++..++++.. 
T Consensus        10 ~~~~~~~~~p~~m-~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-   87 (299)
T 3t7c_A           10 GTLEAQTQGPGSM-AGKVEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEAL-   87 (299)
T ss_dssp             ------------C-CCTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHT-
T ss_pred             cceeccCCCCccc-ccccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhc-
Confidence            5566666666553 457999999999999999999999999999999999987            77777777777665 


Q ss_pred             CCCceEEEeccCCCHHHHHHHHHHHHhcCCCccEEEEcccCCCC---CCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHH
Q 019722           84 PGSDIVVLPLDLSSLSSVRNFVSQFHSLNLPLNLLINNAGKFAH---QHAISEDGIEMTFATNYLGHFLLTKLLLKKMIE  160 (336)
Q Consensus        84 ~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~lv~nAg~~~~---~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~  160 (336)
                       +.++.++++|++|+++++++++++.+.++++|+||||||+...   ..+.+.++|++++++|+.|++.++++++|.|.+
T Consensus        88 -~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~  166 (299)
T 3t7c_A           88 -GRRIIASQVDVRDFDAMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMA  166 (299)
T ss_dssp             -TCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred             -CCceEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh
Confidence             5789999999999999999999999999999999999997654   356788999999999999999999999999987


Q ss_pred             hhccCCCCCeEEEEcCCccccccCCcccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCc
Q 019722          161 TAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGI  240 (336)
Q Consensus       161 ~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~  240 (336)
                      ++.    .|+||++||.++..+                 .+....|++||+++++|+++++.|+++.|  |+||+|+||+
T Consensus       167 ~~~----~g~Iv~isS~~~~~~-----------------~~~~~~Y~asKaa~~~l~~~la~e~~~~g--I~vn~v~PG~  223 (299)
T 3t7c_A          167 GKR----GGSIVFTSSIGGLRG-----------------AENIGNYIASKHGLHGLMRTMALELGPRN--IRVNIVCPSS  223 (299)
T ss_dssp             TTS----CEEEEEECCGGGTSC-----------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEESC
T ss_pred             cCC----CcEEEEECChhhccC-----------------CCCcchHHHHHHHHHHHHHHHHHHhcccC--cEEEEEecCC
Confidence            532    489999999988766                 67788999999999999999999999988  9999999999


Q ss_pred             eeCCCCCccch-----------hHHHHHHH--HH---HhhcCChHHHHHHHHHHHhcCccccCCceeeccCcccc
Q 019722          241 VRTRLTREREG-----------FITDLVFF--LT---SKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAW  299 (336)
Q Consensus       241 v~T~~~~~~~~-----------~~~~~~~~--~~---~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  299 (336)
                      |+|++......           ........  ..   ..+...|+|+|.+++|+++ +.+.++||+.+.++|+..
T Consensus       224 v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~r~~~pedvA~~v~fL~s-~~a~~itG~~i~vdGG~~  297 (299)
T 3t7c_A          224 VATPMLLNEPTYRMFRPDLENPTVEDFQVASRQMHVLPIPYVEPADISNAILFLVS-DDARYITGVSLPVDGGAL  297 (299)
T ss_dssp             BSSTTTSSHHHHHHHCTTSSSCCHHHHHHHHHHHSSSSCSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTGG
T ss_pred             ccCccccccchhhhhhhhhccchhhHHHHHhhhhcccCcCCCCHHHHHHHHHHHhC-cccccCcCCEEeeCCCcc
Confidence            99999764210           01110000  00   1345689999999999997 778999999999999854

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=100.00  E-value=1.2e-43  Score=318.70  Aligned_cols=242  Identities=27%  Similarity=0.324  Sum_probs=212.4

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHh
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHS  110 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  110 (336)
                      .+++||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++...  +.++.++.+|++|+++++++++++.+
T Consensus        24 ~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~  101 (270)
T 3ftp_A           24 KTLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQA--GLEGRGAVLNVNDATAVDALVESTLK  101 (270)
T ss_dssp             CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHH--TCCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEEeCCCHHHHHHHHHHHHH
Confidence            4689999999999999999999999999999999999999999888888766  56889999999999999999999999


Q ss_pred             cCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccc
Q 019722          111 LNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIR  188 (336)
Q Consensus       111 ~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~  188 (336)
                      .++++|+||||||+....  .+.+.++|++++++|+.+++.++++++|.|++++     .|+||++||..+..+      
T Consensus       102 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-----~g~iv~isS~~~~~~------  170 (270)
T 3ftp_A          102 EFGALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKAR-----GGRIVNITSVVGSAG------  170 (270)
T ss_dssp             HHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-----CEEEEEECCHHHHHC------
T ss_pred             HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-----CCEEEEECchhhCCC------
Confidence            999999999999976543  5678899999999999999999999999998875     589999999888776      


Q ss_pred             ccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHH-HHHHHHHHhhcCC
Q 019722          189 YLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFIT-DLVFFLTSKLLKT  267 (336)
Q Consensus       189 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~-~~~~~~~~~~~~~  267 (336)
                                 .++...|++||++++.|+++++.|+++.|  |+||+|+||+|+|++.+....... ......+..+..+
T Consensus       171 -----------~~~~~~Y~asKaa~~~l~~~la~e~~~~g--I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~p~~r~~~  237 (270)
T 3ftp_A          171 -----------NPGQVNYAAAKAGVAGMTRALAREIGSRG--ITVNCVAPGFIDTDMTKGLPQEQQTALKTQIPLGRLGS  237 (270)
T ss_dssp             -----------CTTBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCSHHHHHSCHHHHHHHHTTCTTCSCBC
T ss_pred             -----------CCCchhHHHHHHHHHHHHHHHHHHHhhhC--eEEEEEEeCCCcCcchhhcCHHHHHHHHhcCCCCCCCC
Confidence                       67788999999999999999999999988  999999999999998766433221 1122233445678


Q ss_pred             hHHHHHHHHHHHhcCccccCCceeeccCcccc
Q 019722          268 IPQGAATTCYVAIHPRLVNVSGKYFADCNEAW  299 (336)
Q Consensus       268 ~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  299 (336)
                      |+|+|.+++|+++ +.+.+++|+.+.++|+..
T Consensus       238 pedvA~~v~~L~s-~~~~~itG~~i~vdGG~~  268 (270)
T 3ftp_A          238 PEDIAHAVAFLAS-PQAGYITGTTLHVNGGMF  268 (270)
T ss_dssp             HHHHHHHHHHHHS-GGGTTCCSCEEEESTTSS
T ss_pred             HHHHHHHHHHHhC-CCcCCccCcEEEECCCcc
Confidence            9999999999997 778899999999998754

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=100.00  E-value=6.8e-43  Score=315.51  Aligned_cols=248  Identities=20%  Similarity=0.199  Sum_probs=213.6

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCC-CCceEEEeccCCCHHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCP-GSDIVVLPLDLSSLSSVRNFVSQF  108 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~  108 (336)
                      .++++||++|||||++|||++++++|+++|++|++++|+.+.+++..+++++... ..++.++++|++|+++++++++++
T Consensus         6 ~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   85 (281)
T 3svt_A            6 QLSFQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAV   85 (281)
T ss_dssp             --CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHH
T ss_pred             ccCcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHH
Confidence            3578999999999999999999999999999999999999999999888877532 238999999999999999999999


Q ss_pred             HhcCCCccEEEEcccCCCC---CCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCC
Q 019722          109 HSLNLPLNLLINNAGKFAH---QHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGD  185 (336)
Q Consensus       109 ~~~~~~id~lv~nAg~~~~---~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~  185 (336)
                      .+.++++|+||||||+...   ..+.+.++|++++++|+.+++.++++++|.|.+++     .|+||++||..+..+   
T Consensus        86 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-----~g~iv~isS~~~~~~---  157 (281)
T 3svt_A           86 TAWHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGG-----GGSFVGISSIAASNT---  157 (281)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----CEEEEEECCHHHHSC---
T ss_pred             HHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-----CcEEEEEeCHHHcCC---
Confidence            9999999999999997432   26778899999999999999999999999998865     589999999887765   


Q ss_pred             cccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccc---hhHHHHHHHHHH
Q 019722          186 MIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRERE---GFITDLVFFLTS  262 (336)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~---~~~~~~~~~~~~  262 (336)
                                    .+....|++||++++.|+++++.|+++.|  |+||+|+||+|+|++.+...   ..........+.
T Consensus       158 --------------~~~~~~Y~asK~a~~~l~~~la~e~~~~g--i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~  221 (281)
T 3svt_A          158 --------------HRWFGAYGVTKSAVDHLMQLAADELGASW--VRVNSIRPGLIRTDLVAAITESAELSSDYAMCTPL  221 (281)
T ss_dssp             --------------CTTCTHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCSGGGHHHHTCHHHHHHHHHHCSS
T ss_pred             --------------CCCChhHHHHHHHHHHHHHHHHHHhhhcC--eEEEEEEeCcCcCcchhhcccCHHHHHHHHhcCCC
Confidence                          56677899999999999999999999988  99999999999999976532   122222333344


Q ss_pred             hhcCChHHHHHHHHHHHhcCccccCCceeeccCccccccc
Q 019722          263 KLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWTSK  302 (336)
Q Consensus       263 ~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~~~  302 (336)
                      .+..+|+|+|.+++|+++ +.+.+++|+.+.++|+.....
T Consensus       222 ~r~~~~~dva~~~~~l~s-~~~~~itG~~~~vdgG~~~~~  260 (281)
T 3svt_A          222 PRQGEVEDVANMAMFLLS-DAASFVTGQVINVDGGQMLRR  260 (281)
T ss_dssp             SSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTGGGSC
T ss_pred             CCCCCHHHHHHHHHHHhC-cccCCCCCCEEEeCCChhccc
Confidence            566789999999999997 677899999999999876653

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=100.00  E-value=3.9e-43  Score=311.27  Aligned_cols=240  Identities=23%  Similarity=0.283  Sum_probs=209.4

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHh
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHS  110 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  110 (336)
                      .+|+||++|||||++|||++++++|+++|++|++++|+.+.+++..+++     +.++.++++|++|+++++++++++.+
T Consensus         2 ~~l~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~   76 (247)
T 3rwb_A            2 ERLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASI-----GKKARAIAADISDPGSVKALFAEIQA   76 (247)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH-----CTTEEECCCCTTCHHHHHHHHHHHHH
T ss_pred             CCcCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            5689999999999999999999999999999999999999888877766     56899999999999999999999999


Q ss_pred             cCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccc
Q 019722          111 LNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIR  188 (336)
Q Consensus       111 ~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~  188 (336)
                      .++++|+||||||+....  .+.+.++|++++++|+.+++.++++++|+|++++.    .|+||++||..+..+      
T Consensus        77 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~----~g~iv~isS~~~~~~------  146 (247)
T 3rwb_A           77 LTGGIDILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGK----AGRVISIASNTFFAG------  146 (247)
T ss_dssp             HHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC----CEEEEEECCTHHHHT------
T ss_pred             HCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCC----CcEEEEECchhhccC------
Confidence            999999999999986543  57788999999999999999999999999988642    489999999988776      


Q ss_pred             ccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhH-HHHHHH-HHHhhcC
Q 019722          189 YLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFI-TDLVFF-LTSKLLK  266 (336)
Q Consensus       189 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~-~~~~~~-~~~~~~~  266 (336)
                                 .++...|++||+++++|+++++.|+++.|  |+||+|+||+|+|++.+...... ...... .+..+..
T Consensus       147 -----------~~~~~~Y~asKaa~~~~~~~la~e~~~~g--i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~r~~  213 (247)
T 3rwb_A          147 -----------TPNMAAYVAAKGGVIGFTRALATELGKYN--ITANAVTPGLIESDGVKASPHNEAFGFVEMLQAMKGKG  213 (247)
T ss_dssp             -----------CTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCHHHHTSGGGGGHHHHHHHSSSCSCB
T ss_pred             -----------CCCchhhHHHHHHHHHHHHHHHHHhhhcC--eEEEEEeeCcCcCccccccChhHHHHHHhcccccCCCc
Confidence                       67788999999999999999999999988  99999999999999876643222 122222 3344567


Q ss_pred             ChHHHHHHHHHHHhcCccccCCceeeccCcccc
Q 019722          267 TIPQGAATTCYVAIHPRLVNVSGKYFADCNEAW  299 (336)
Q Consensus       267 ~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  299 (336)
                      .|+|++..++|+++ +.+.+++|+.+.++|+..
T Consensus       214 ~pedva~~v~~L~s-~~~~~itG~~i~vdGG~~  245 (247)
T 3rwb_A          214 QPEHIADVVSFLAS-DDARWITGQTLNVDAGMV  245 (247)
T ss_dssp             CHHHHHHHHHHHHS-GGGTTCCSCEEEESTTSS
T ss_pred             CHHHHHHHHHHHhC-ccccCCCCCEEEECCCcc
Confidence            89999999999997 778899999999998753

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=100.00  E-value=3.4e-43  Score=317.82  Aligned_cols=245  Identities=25%  Similarity=0.219  Sum_probs=208.2

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      ++++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++...  +.++.++++|++|+++++++++++.
T Consensus        23 m~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~  100 (283)
T 3v8b_A           23 MMNQPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGA--GGQAIALEADVSDELQMRNAVRDLV  100 (283)
T ss_dssp             ----CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTT--TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             hcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHH
Confidence            67899999999999999999999999999999999999999999988888664  5689999999999999999999999


Q ss_pred             hcCCCccEEEEcccCCCC---CCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCc
Q 019722          110 SLNLPLNLLINNAGKFAH---QHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDM  186 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~~---~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~  186 (336)
                      +.++++|+||||||+...   ..+.+.++|++++++|+.|++.++++++|.|++++     .|+||++||..+....+  
T Consensus       101 ~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-----~g~Iv~isS~~~~~~~~--  173 (283)
T 3v8b_A          101 LKFGHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRG-----GGAIVVVSSINGTRTFT--  173 (283)
T ss_dssp             HHHSCCCEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-----CEEEEEECCSBTTTBCC--
T ss_pred             HHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-----CceEEEEcChhhccCCC--
Confidence            999999999999997543   36788899999999999999999999999998875     58999999988765211  


Q ss_pred             ccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHH--------HH
Q 019722          187 IRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDL--------VF  258 (336)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~--------~~  258 (336)
                                   .++...|++||++++.|+++++.|+++.|  |+||+|+||+|+|++...........        ..
T Consensus       174 -------------~~~~~~Y~asKaa~~~l~~~la~e~~~~g--I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~  238 (283)
T 3v8b_A          174 -------------TPGATAYTATKAAQVAIVQQLALELGKHH--IRVNAVCPGAIETNISDNTKLRHEEETAIPVEWPKG  238 (283)
T ss_dssp             -------------STTCHHHHHHHHHHHHHHHHHHHHTTTTT--EEEEEEEECSBSSCTTCCTTBCCHHHHSCCCBCTTC
T ss_pred             -------------CCCchHHHHHHHHHHHHHHHHHHHhCccC--cEEEEEEeCCCcCCcccccccccchhhhhhhhhhhh
Confidence                         56778999999999999999999999888  99999999999999987642111110        01


Q ss_pred             HHHH--hhcCChHHHHHHHHHHHhcCccccCCceeeccCcccc
Q 019722          259 FLTS--KLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAW  299 (336)
Q Consensus       259 ~~~~--~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  299 (336)
                      ..+.  .+...|+|+|.+++|+++ +.+.++||+.+.++|+..
T Consensus       239 ~~p~~~~r~~~pedvA~~v~fL~s-~~a~~itG~~i~vdGG~~  280 (283)
T 3v8b_A          239 QVPITDGQPGRSEDVAELIRFLVS-ERARHVTGSPVWIDGGQG  280 (283)
T ss_dssp             SCGGGTTCCBCHHHHHHHHHHHTS-GGGTTCCSCEEEESTTHH
T ss_pred             cCccccCCCCCHHHHHHHHHHHcC-ccccCCcCCEEEECcCcc
Confidence            1122  566789999999999987 778999999999998753

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=100.00  E-value=7.6e-43  Score=311.41  Aligned_cols=242  Identities=21%  Similarity=0.224  Sum_probs=212.1

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEe-eCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcC
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGARLVLP-ARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLN  112 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~-~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  112 (336)
                      +||++|||||++|||++++++|+++|++|+++ +|+.+.+++..++++..  +.++.++++|++|+++++++++++.+.+
T Consensus         3 ~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   80 (258)
T 3oid_A            3 QNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKL--GVKVLVVKANVGQPAKIKEMFQQIDETF   80 (258)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTT--TCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            68999999999999999999999999999987 89999888888888765  5689999999999999999999999999


Q ss_pred             CCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccccc
Q 019722          113 LPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYL  190 (336)
Q Consensus       113 ~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~  190 (336)
                      +++|+||||||+....  .+.+.++|++++++|+.+++.++++++|.|++++     .|+||++||..+..+        
T Consensus        81 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~-----~g~iv~isS~~~~~~--------  147 (258)
T 3oid_A           81 GRLDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNG-----GGHIVSISSLGSIRY--------  147 (258)
T ss_dssp             SCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTT-----CEEEEEEEEGGGTSB--------
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-----CcEEEEECchhhCCC--------
Confidence            9999999999975443  5778899999999999999999999999998865     589999999887765        


Q ss_pred             ccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccch---hHHHHHHHHHHhhcCC
Q 019722          191 GQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREG---FITDLVFFLTSKLLKT  267 (336)
Q Consensus       191 ~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~---~~~~~~~~~~~~~~~~  267 (336)
                               .++...|++||++++.|+++++.|+++.|  |+||+|+||+++|++.+....   .........+..+...
T Consensus       148 ---------~~~~~~Y~asKaa~~~l~~~la~e~~~~g--i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~  216 (258)
T 3oid_A          148 ---------LENYTTVGVSKAALEALTRYLAVELSPKQ--IIVNAVSGGAIDTDALKHFPNREDLLEDARQNTPAGRMVE  216 (258)
T ss_dssp             ---------CTTCHHHHHHHHHHHHHHHHHHHHTGGGT--EEEEEEEECCBCSGGGGGCTTHHHHHHHHHHHCTTSSCBC
T ss_pred             ---------CCCcHHHHHHHHHHHHHHHHHHHHHhhcC--cEEEEEeeCCCcChhhhhcccCHHHHHHHHhcCCCCCCcC
Confidence                     66788999999999999999999999988  999999999999999876532   2222333444566789


Q ss_pred             hHHHHHHHHHHHhcCccccCCceeeccCccccccc
Q 019722          268 IPQGAATTCYVAIHPRLVNVSGKYFADCNEAWTSK  302 (336)
Q Consensus       268 ~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~~~  302 (336)
                      |+|+|.+++|+++ +.+.+++|+.+.++|+.....
T Consensus       217 ~~dva~~v~~L~s-~~~~~itG~~i~vdGG~~~~~  250 (258)
T 3oid_A          217 IKDMVDTVEFLVS-SKADMIRGQTIIVDGGRSLLV  250 (258)
T ss_dssp             HHHHHHHHHHHTS-STTTTCCSCEEEESTTGGGBC
T ss_pred             HHHHHHHHHHHhC-cccCCccCCEEEECCCccCCC
Confidence            9999999999987 777899999999999865543

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=100.00  E-value=4.1e-43  Score=314.19  Aligned_cols=240  Identities=21%  Similarity=0.255  Sum_probs=209.3

Q ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhc
Q 019722           32 NLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSL  111 (336)
Q Consensus        32 ~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  111 (336)
                      .|+||++|||||++|||++++++|+++|++|++++|+.+++++..+++...  +.++.++++|++|+++++++++++.+.
T Consensus         8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~   85 (264)
T 3ucx_A            8 LLTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDT--GRRALSVGTDITDDAQVAHLVDETMKA   85 (264)
T ss_dssp             TTTTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CcCCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            489999999999999999999999999999999999999999988888765  678999999999999999999999999


Q ss_pred             CCCccEEEEcccCCCC---CCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccc
Q 019722          112 NLPLNLLINNAGKFAH---QHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIR  188 (336)
Q Consensus       112 ~~~id~lv~nAg~~~~---~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~  188 (336)
                      ++++|+||||||....   ..+.+.++|++++++|+.+++.++++++|.|++++      |+||++||..+..+      
T Consensus        86 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~------g~iv~isS~~~~~~------  153 (264)
T 3ucx_A           86 YGRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEESK------GAVVNVNSMVVRHS------  153 (264)
T ss_dssp             TSCCSEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHT------CEEEEECCGGGGCC------
T ss_pred             cCCCcEEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC------CEEEEECcchhccC------
Confidence            9999999999997532   25778899999999999999999999999998763      89999999988766      


Q ss_pred             ccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchh--------HHHHH---
Q 019722          189 YLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGF--------ITDLV---  257 (336)
Q Consensus       189 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~--------~~~~~---  257 (336)
                                 .+.+..|++||++++.|+++++.|+++.|  |+||+|+||+|+|++.+.....        .....   
T Consensus       154 -----------~~~~~~Y~asKaa~~~~~~~la~e~~~~g--i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~  220 (264)
T 3ucx_A          154 -----------QAKYGAYKMAKSALLAMSQTLATELGEKG--IRVNSVLPGYIWGGTLKSYFEHQAGKYGTSVEDIYNAA  220 (264)
T ss_dssp             -----------CTTCHHHHHHHHHHHHHHHHHHHHHHTTT--CEEEEEEESSCBSHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred             -----------CCccHHHHHHHHHHHHHHHHHHHHhCccC--eEEEEEecCccccccHHHHHHhhhhhcCCCHHHHHHHH
Confidence                       66778999999999999999999999988  9999999999999987653211        01111   


Q ss_pred             -HHHHHhhcCChHHHHHHHHHHHhcCccccCCceeeccCcccc
Q 019722          258 -FFLTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAW  299 (336)
Q Consensus       258 -~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  299 (336)
                       ...+..+...|+|+|.+++|+++ +.+.++||+.+.++|+..
T Consensus       221 ~~~~p~~r~~~p~dvA~~v~~L~s-~~~~~itG~~i~vdGG~~  262 (264)
T 3ucx_A          221 AAGSDLKRLPTEDEVASAILFMAS-DLASGITGQALDVNCGEY  262 (264)
T ss_dssp             HTTSSSSSCCBHHHHHHHHHHHHS-GGGTTCCSCEEEESTTSS
T ss_pred             hccCCcccCCCHHHHHHHHHHHcC-ccccCCCCCEEEECCCcc
Confidence             12233456789999999999997 777899999999998754

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=100.00  E-value=8e-43  Score=314.35  Aligned_cols=252  Identities=21%  Similarity=0.236  Sum_probs=208.4

Q ss_pred             CCCCCccccccCCCCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCC
Q 019722           17 YGSKSTAEQVTDGCPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLS   96 (336)
Q Consensus        17 ~~~~~~~~~~~~~~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~   96 (336)
                      +....-+.+|.  .++++||++|||||++|||++++++|+++|++|++++|+.+.+++..+++     +.++.++++|++
T Consensus        13 ~~~~~g~~sm~--~~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~   85 (277)
T 3gvc_A           13 EAQTQGPGSMN--HPDLAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKI-----GCGAAACRVDVS   85 (277)
T ss_dssp             ----------------CTTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH-----CSSCEEEECCTT
T ss_pred             hhccCCCCCCC--ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc-----CCcceEEEecCC
Confidence            33333334444  56799999999999999999999999999999999999999888877766     568899999999


Q ss_pred             CHHHHHHHHHHHHhcCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEE
Q 019722           97 SLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNV  174 (336)
Q Consensus        97 ~~~~v~~~~~~~~~~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~v  174 (336)
                      |+++++++++++.+.++++|+||||||+....  .+.+.++|++++++|+.+++.++++++|.|++++     .|+||++
T Consensus        86 d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-----~g~Iv~i  160 (277)
T 3gvc_A           86 DEQQIIAMVDACVAAFGGVDKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERG-----GGAIVNL  160 (277)
T ss_dssp             CHHHHHHHHHHHHHHHSSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----CEEEEEE
T ss_pred             CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-----CcEEEEE
Confidence            99999999999999999999999999986543  5778899999999999999999999999998865     5899999


Q ss_pred             cCCccccccCCcccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccch---
Q 019722          175 SSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREG---  251 (336)
Q Consensus       175 sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~---  251 (336)
                      ||..+..+                 .++...|++||++++.|+++++.|+++.|  |+||+|+||+|+|++.+....   
T Consensus       161 sS~~~~~~-----------------~~~~~~Y~asKaa~~~l~~~la~e~~~~g--I~vn~v~PG~v~t~~~~~~~~~~~  221 (277)
T 3gvc_A          161 SSLAGQVA-----------------VGGTGAYGMSKAGIIQLSRITAAELRSSG--IRSNTLLPAFVDTPMQQTAMAMFD  221 (277)
T ss_dssp             CCGGGTSC-----------------CTTBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCHHHHHHHTCC-
T ss_pred             cchhhccC-----------------CCCchhHHHHHHHHHHHHHHHHHHhcccC--eEEEEEeeCCccCchHHHhhhcch
Confidence            99988766                 67788999999999999999999999988  999999999999998654211   


Q ss_pred             -----hHHHHHHHHHHhhcCChHHHHHHHHHHHhcCccccCCceeeccCccccc
Q 019722          252 -----FITDLVFFLTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWT  300 (336)
Q Consensus       252 -----~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~  300 (336)
                           .........+..+..+|+|+|.+++|+++ +.+.+++|+.+.++|+...
T Consensus       222 ~~~~~~~~~~~~~~~~~r~~~pedvA~~v~~L~s-~~a~~itG~~i~vdGG~~~  274 (277)
T 3gvc_A          222 GALGAGGARSMIARLQGRMAAPEEMAGIVVFLLS-DDASMITGTTQIADGGTIA  274 (277)
T ss_dssp             -----CCHHHHHHHHHSSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTGGG
T ss_pred             hhHHHHhhhhhhhccccCCCCHHHHHHHHHHHcC-CccCCccCcEEEECCcchh
Confidence                 01111113445677899999999999997 7778999999999998644

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=100.00  E-value=6.2e-43  Score=311.77  Aligned_cols=245  Identities=21%  Similarity=0.244  Sum_probs=210.4

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHh
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHS  110 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  110 (336)
                      .+|+||++|||||++|||++++++|+++|++|++++|+.+++++..++++..  +.++.++++|++++++++++++++.+
T Consensus         2 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~   79 (257)
T 3imf_A            2 NAMKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQF--PGQILTVQMDVRNTDDIQKMIEQIDE   79 (257)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCS--TTCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            4689999999999999999999999999999999999999999888888654  56899999999999999999999999


Q ss_pred             cCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccc
Q 019722          111 LNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIR  188 (336)
Q Consensus       111 ~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~  188 (336)
                      .++++|+||||||+....  .+.+.++|++++++|+.+++.++++++|.|.+++.    .|+||++||..+..+      
T Consensus        80 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~----~g~iv~isS~~~~~~------  149 (257)
T 3imf_A           80 KFGRIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGI----KGNIINMVATYAWDA------  149 (257)
T ss_dssp             HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC----CCEEEEECCGGGGSC------
T ss_pred             HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCC----CcEEEEECchhhccC------
Confidence            999999999999976543  67788999999999999999999999999965432    589999999988765      


Q ss_pred             ccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHc-cCCCcEEEEEeeCCceeCCCCCccc----hhHHHHHHHHHHh
Q 019722          189 YLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLK-QMEANVTVNCVHPGIVRTRLTRERE----GFITDLVFFLTSK  263 (336)
Q Consensus       189 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~-~~g~~I~vn~v~PG~v~T~~~~~~~----~~~~~~~~~~~~~  263 (336)
                                 .++...|++||+++++|+++++.|++ +.|  ||||+|+||+|+|++.....    ..........+..
T Consensus       150 -----------~~~~~~Y~asKaa~~~l~~~la~e~~~~~g--Irvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~p~~  216 (257)
T 3imf_A          150 -----------GPGVIHSAAAKAGVLAMTKTLAVEWGRKYG--IRVNAIAPGPIERTGGADKLWISEEMAKRTIQSVPLG  216 (257)
T ss_dssp             -----------CTTCHHHHHHHHHHHHHHHHHHHHHHHHHC--CEEEEEEECCBSSCCCC-------CCSHHHHTTSTTC
T ss_pred             -----------CCCcHHHHHHHHHHHHHHHHHHHHhccccC--eEEEEEEECCCcCCcchhhcccCHHHHHHHHhcCCCC
Confidence                       66788999999999999999999997 667  99999999999999765421    1222233334455


Q ss_pred             hcCChHHHHHHHHHHHhcCccccCCceeeccCcccccc
Q 019722          264 LLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWTS  301 (336)
Q Consensus       264 ~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~~  301 (336)
                      +..+|+|+|.+++|+++ +.+.+++|+.+.++|+....
T Consensus       217 r~~~pedvA~~v~~L~s-~~~~~itG~~i~vdGG~~~~  253 (257)
T 3imf_A          217 RLGTPEEIAGLAYYLCS-DEAAYINGTCMTMDGGQHLH  253 (257)
T ss_dssp             SCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTTTSC
T ss_pred             CCcCHHHHHHHHHHHcC-chhcCccCCEEEECCCcccC
Confidence            67799999999999997 77789999999999986543

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=100.00  E-value=3.5e-43  Score=319.05  Aligned_cols=246  Identities=21%  Similarity=0.257  Sum_probs=214.6

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      +++++||++|||||++|||++++++|+++|++|++++|+.+++++..+++.... ..++.++++|++|+++++++++++.
T Consensus        36 m~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dv~d~~~v~~~~~~~~  114 (293)
T 3rih_A           36 MFDLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELG-AGNVIGVRLDVSDPGSCADAARTVV  114 (293)
T ss_dssp             TTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSS-SSCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhC-CCcEEEEEEeCCCHHHHHHHHHHHH
Confidence            778999999999999999999999999999999999999999988888887652 2589999999999999999999999


Q ss_pred             hcCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccc-cccCCc
Q 019722          110 SLNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHS-WFSGDM  186 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~-~~~~~~  186 (336)
                      +.++++|+||||||+....  .+.+.++|++.+++|+.|++.++++++|.|++++     .|+||++||..+. .+    
T Consensus       115 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-----~g~iV~isS~~~~~~~----  185 (293)
T 3rih_A          115 DAFGALDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASG-----RGRVILTSSITGPVTG----  185 (293)
T ss_dssp             HHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHS-----SCEEEEECCSBTTTBB----
T ss_pred             HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-----CCEEEEEeChhhccCC----
Confidence            9999999999999986543  5778999999999999999999999999998876     5899999998875 44    


Q ss_pred             ccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccch-hHHHHHHHHHHhhc
Q 019722          187 IRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREG-FITDLVFFLTSKLL  265 (336)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~-~~~~~~~~~~~~~~  265 (336)
                                   .++...|++||++++.|+++++.|+++.|  |+||+|+||+|.|++...... .........+..+.
T Consensus       186 -------------~~~~~~Y~asKaa~~~l~~~la~e~~~~g--I~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~r~  250 (293)
T 3rih_A          186 -------------YPGWSHYGASKAAQLGFMRTAAIELAPRG--VTVNAILPGNILTEGLVDMGEEYISGMARSIPMGML  250 (293)
T ss_dssp             -------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECSBCCHHHHHTCHHHHHHHHTTSTTSSC
T ss_pred             -------------CCCCHHHHHHHHHHHHHHHHHHHHHhhhC--eEEEEEecCCCcCcchhhccHHHHHHHHhcCCCCCC
Confidence                         56778999999999999999999999988  999999999999998765432 22222233445567


Q ss_pred             CChHHHHHHHHHHHhcCccccCCceeeccCcccccc
Q 019722          266 KTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWTS  301 (336)
Q Consensus       266 ~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~~  301 (336)
                      ..|+|++..++|+++ +.+.+++|+.+.++|+...+
T Consensus       251 ~~p~dvA~~v~fL~s-~~a~~itG~~i~vdGG~~~~  285 (293)
T 3rih_A          251 GSPVDIGHLAAFLAT-DEAGYITGQAIVVDGGQVLP  285 (293)
T ss_dssp             BCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTTTCB
T ss_pred             CCHHHHHHHHHHHhC-ccccCCCCCEEEECCCccCC
Confidence            789999999999997 77889999999999986543

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=100.00  E-value=1.1e-42  Score=314.97  Aligned_cols=243  Identities=20%  Similarity=0.168  Sum_probs=207.7

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCC----------------hHHHHHHHHHHHhhCCCCceEEEecc
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARS----------------LKAAEEAKARLASDCPGSDIVVLPLD   94 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~----------------~~~~~~~~~~l~~~~~~~~~~~~~~D   94 (336)
                      .+++||++|||||++|||++++++|+++|++|++++|+                .+.+++..+++...  +.++.++++|
T Consensus         7 ~~l~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D   84 (286)
T 3uve_A            7 GRVEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGH--NRRIVTAEVD   84 (286)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTT--TCCEEEEECC
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhc--CCceEEEEcC
Confidence            46899999999999999999999999999999999887                67777777777654  5689999999


Q ss_pred             CCCHHHHHHHHHHHHhcCCCccEEEEcccCCCCC---CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeE
Q 019722           95 LSSLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQ---HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRI  171 (336)
Q Consensus        95 l~~~~~v~~~~~~~~~~~~~id~lv~nAg~~~~~---~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grI  171 (336)
                      ++++++++++++++.+.++++|+||||||+....   .+.+.++|++++++|+.+++.++++++|.|.+++.    .|+|
T Consensus        85 v~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~----~g~i  160 (286)
T 3uve_A           85 VRDYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGR----GGSI  160 (286)
T ss_dssp             TTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTS----CEEE
T ss_pred             CCCHHHHHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCC----CcEE
Confidence            9999999999999999999999999999976542   46788999999999999999999999999988642    4799


Q ss_pred             EEEcCCccccccCCcccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccch
Q 019722          172 VNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREG  251 (336)
Q Consensus       172 V~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~  251 (336)
                      |++||..+..+                 .+....|++||+++++|+++++.|+++.|  |+||+|+||+|+|++.+....
T Consensus       161 v~isS~~~~~~-----------------~~~~~~Y~asKaa~~~~~~~la~e~~~~g--I~vn~v~PG~v~T~~~~~~~~  221 (286)
T 3uve_A          161 ILTSSVGGLKA-----------------YPHTGHYVAAKHGVVGLMRAFGVELGQHM--IRVNSVHPTHVKTPMLHNEGT  221 (286)
T ss_dssp             EEECCGGGTSC-----------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEESSBSSTTTSSHHH
T ss_pred             EEECchhhccC-----------------CCCccHHHHHHHHHHHHHHHHHHHhcccC--eEEEEEecCcccCCcccccch
Confidence            99999988766                 67788999999999999999999999988  999999999999999864211


Q ss_pred             -----------hHHHHHH------HHHHhhcCChHHHHHHHHHHHhcCccccCCceeeccCccccc
Q 019722          252 -----------FITDLVF------FLTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWT  300 (336)
Q Consensus       252 -----------~~~~~~~------~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~  300 (336)
                                 .......      ..+ .+...|+|+|.+++||++ +.++++||+.+.++|+...
T Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~~p-~r~~~p~dvA~~v~fL~s-~~a~~itG~~i~vdGG~~l  285 (286)
T 3uve_A          222 FKMFRPDLENPGPDDMAPICQMFHTLP-IPWVEPIDISNAVLFFAS-DEARYITGVTLPIDAGSCL  285 (286)
T ss_dssp             HHHHCTTSSSCCHHHHHHHHHTTCSSS-CSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTGGG
T ss_pred             hhhccccccccchhhHHHHHHhhhccC-CCcCCHHHHHHHHHHHcC-ccccCCcCCEEeECCcccc
Confidence                       0000000      111 455689999999999997 7789999999999998543

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=100.00  E-value=1.4e-42  Score=312.82  Aligned_cols=245  Identities=24%  Similarity=0.263  Sum_probs=212.6

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      +..|+||++|||||++|||++++++|+++|++|++++|+.+++++..+++.... +.++.++++|++++++++++++++.
T Consensus        22 ~~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~  100 (277)
T 4fc7_A           22 PDLLRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGAT-GRRCLPLSMDVRAPPAVMAAVDQAL  100 (277)
T ss_dssp             TTTTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHH-SSCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhc-CCcEEEEEcCCCCHHHHHHHHHHHH
Confidence            556999999999999999999999999999999999999999888888876543 4689999999999999999999999


Q ss_pred             hcCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcc
Q 019722          110 SLNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMI  187 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~  187 (336)
                      +.++++|+||||||+....  .+.+.++|++++++|+.+++.++++++|.|.+++     .|+||++||..+..+     
T Consensus       101 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-----~g~iv~isS~~~~~~-----  170 (277)
T 4fc7_A          101 KEFGRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDH-----GGVIVNITATLGNRG-----  170 (277)
T ss_dssp             HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHH-----CEEEEEECCSHHHHT-----
T ss_pred             HHcCCCCEEEECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-----CCEEEEECchhhCCC-----
Confidence            9999999999999976543  5678899999999999999999999999998776     589999999988776     


Q ss_pred             cccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCcc----chhHHHHHHHHHHh
Q 019722          188 RYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRER----EGFITDLVFFLTSK  263 (336)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~----~~~~~~~~~~~~~~  263 (336)
                                  .+....|++||++++.|+++++.|+++.|  |+||+|+||+|.|++....    ...........+..
T Consensus       171 ------------~~~~~~Y~asKaa~~~l~~~la~e~~~~g--i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~p~~  236 (277)
T 4fc7_A          171 ------------QALQVHAGSAKAAVDAMTRHLAVEWGPQN--IRVNSLAPGPISGTEGLRRLGGPQASLSTKVTASPLQ  236 (277)
T ss_dssp             ------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCBSSSHHHHHHSCCHHHHHHHHHTSTTS
T ss_pred             ------------CCCcHHHHHHHHHHHHHHHHHHHHhhhcC--eEEEEEEECCEecchhhhhccCCHHHHHHHhccCCCC
Confidence                        66778999999999999999999999988  9999999999999864321    12222333334456


Q ss_pred             hcCChHHHHHHHHHHHhcCccccCCceeeccCccccc
Q 019722          264 LLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWT  300 (336)
Q Consensus       264 ~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~  300 (336)
                      +..+|+|+|.+++||++ +.++++||+.+.++|+...
T Consensus       237 r~~~p~dvA~~v~fL~s-~~~~~itG~~i~vdGG~~~  272 (277)
T 4fc7_A          237 RLGNKTEIAHSVLYLAS-PLASYVTGAVLVADGGAWL  272 (277)
T ss_dssp             SCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTHHH
T ss_pred             CCcCHHHHHHHHHHHcC-CccCCcCCCEEEECCCccc
Confidence            67899999999999997 7788999999999998543

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=100.00  E-value=1.6e-42  Score=309.39  Aligned_cols=241  Identities=20%  Similarity=0.268  Sum_probs=208.6

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      +.+++||++|||||++|||++++++|+++|++|++++|+.+.+++..+++     +.++.++++|++++++++++++++.
T Consensus         3 m~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~v~~~~~~~~   77 (259)
T 4e6p_A            3 MKRLEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEI-----GPAAYAVQMDVTRQDSIDAAIAATV   77 (259)
T ss_dssp             -CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----CTTEEEEECCTTCHHHHHHHHHHHH
T ss_pred             cccCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCCceEEEeeCCCHHHHHHHHHHHH
Confidence            35689999999999999999999999999999999999999888877766     4578999999999999999999999


Q ss_pred             hcCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcc
Q 019722          110 SLNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMI  187 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~  187 (336)
                      +.++++|+||||||+....  .+.+.++|++++++|+.+++.++++++|.|.+++.    +|+||++||..+..+     
T Consensus        78 ~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~----~g~iv~isS~~~~~~-----  148 (259)
T 4e6p_A           78 EHAGGLDILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGR----GGKIINMASQAGRRG-----  148 (259)
T ss_dssp             HHSSSCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTS----CEEEEEECCGGGTSC-----
T ss_pred             HHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC----CeEEEEECChhhccC-----
Confidence            9999999999999986543  56788999999999999999999999999987642    479999999988776     


Q ss_pred             cccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccc------------hhHHH
Q 019722          188 RYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRERE------------GFITD  255 (336)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~------------~~~~~  255 (336)
                                  .+....|++||++++.|+++++.|+++.|  |+||+|+||+|+|++.+...            .....
T Consensus       149 ------------~~~~~~Y~asK~a~~~~~~~la~e~~~~g--i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~  214 (259)
T 4e6p_A          149 ------------EALVAIYCATKAAVISLTQSAGLDLIKHR--INVNAIAPGVVDGEHWDGVDALFARYENRPRGEKKRL  214 (259)
T ss_dssp             ------------CTTBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCBCSTTHHHHHHHHHHHHTCCTTHHHHH
T ss_pred             ------------CCCChHHHHHHHHHHHHHHHHHHHhhhcC--CEEEEEEECCCccchhhhhhhhhhhhccCChHHHHHH
Confidence                        66778999999999999999999999988  99999999999999876531            11112


Q ss_pred             HHHHHHHhhcCChHHHHHHHHHHHhcCccccCCceeeccCcccc
Q 019722          256 LVFFLTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAW  299 (336)
Q Consensus       256 ~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  299 (336)
                      .....+..+...|+|+|.+++|+++ +.+.+++|+.+.++|+..
T Consensus       215 ~~~~~p~~r~~~~~dva~~v~~L~s-~~~~~itG~~i~vdgG~~  257 (259)
T 4e6p_A          215 VGEAVPFGRMGTAEDLTGMAIFLAS-AESDYIVSQTYNVDGGNW  257 (259)
T ss_dssp             HHHHSTTSSCBCTHHHHHHHHHTTS-GGGTTCCSCEEEESTTSS
T ss_pred             HhccCCCCCCcCHHHHHHHHHHHhC-CccCCCCCCEEEECcChh
Confidence            2223344567799999999999987 778899999999998754

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=100.00  E-value=1.2e-42  Score=313.31  Aligned_cols=243  Identities=23%  Similarity=0.236  Sum_probs=209.1

Q ss_pred             CCCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHH
Q 019722           29 GCPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQF  108 (336)
Q Consensus        29 ~~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~  108 (336)
                      ..++++||++|||||++|||++++++|+++|++|++++|+.+.+++..+++     +.++.++++|++++++++++++++
T Consensus        21 ~~~~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~d~~~v~~~~~~~   95 (277)
T 4dqx_A           21 QSMDLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEI-----GSKAFGVRVDVSSAKDAESMVEKT   95 (277)
T ss_dssp             -CCTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH-----CTTEEEEECCTTCHHHHHHHHHHH
T ss_pred             ccCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCceEEEEecCCCHHHHHHHHHHH
Confidence            367899999999999999999999999999999999999998888777664     568999999999999999999999


Q ss_pred             HhcCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCc
Q 019722          109 HSLNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDM  186 (336)
Q Consensus       109 ~~~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~  186 (336)
                      .+.++++|+||||||+....  .+.+.++|++++++|+.|++.++++++|.|++++     .|+||++||..+..+    
T Consensus        96 ~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-----~g~iv~isS~~~~~~----  166 (277)
T 4dqx_A           96 TAKWGRVDVLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNG-----GGSIINTTSYTATSA----  166 (277)
T ss_dssp             HHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTT-----CEEEEEECCGGGTSC----
T ss_pred             HHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-----CcEEEEECchhhCcC----
Confidence            99999999999999976543  5678899999999999999999999999998765     589999999888765    


Q ss_pred             ccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccc---hhHHH----HHHH
Q 019722          187 IRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRERE---GFITD----LVFF  259 (336)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~---~~~~~----~~~~  259 (336)
                                   .++...|++||+++++|+++++.|+++.|  |+||+|+||+|+|++.....   .....    ....
T Consensus       167 -------------~~~~~~Y~asKaa~~~l~~~la~e~~~~g--i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~  231 (277)
T 4dqx_A          167 -------------IADRTAYVASKGAISSLTRAMAMDHAKEG--IRVNAVAPGTIDSPYFTKIFAEAKDPAKLRSDFNAR  231 (277)
T ss_dssp             -------------CTTBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCHHHHHHHHTCSCHHHHHHHHHTT
T ss_pred             -------------CCCChhHHHHHHHHHHHHHHHHHHhhhcC--eEEEEEeeCcCcCchhhhhcccccchhHHHHHHHhc
Confidence                         66788999999999999999999999988  99999999999999843321   01111    2222


Q ss_pred             HHHhhcCChHHHHHHHHHHHhcCccccCCceeeccCcccccc
Q 019722          260 LTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWTS  301 (336)
Q Consensus       260 ~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~~  301 (336)
                      .+..+..+|+|+|.+++|+++ +.+.+++|+.+.++|+....
T Consensus       232 ~~~~r~~~pedvA~~v~~L~s-~~~~~itG~~i~vdGG~~~~  272 (277)
T 4dqx_A          232 AVMDRMGTAEEIAEAMLFLAS-DRSRFATGSILTVDGGSSIG  272 (277)
T ss_dssp             STTCSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESSSSSSC
T ss_pred             CcccCCcCHHHHHHHHHHHhC-CccCCCcCCEEEECCchhhh
Confidence            334556789999999999997 67789999999999986654

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=100.00  E-value=6.8e-43  Score=314.87  Aligned_cols=243  Identities=22%  Similarity=0.220  Sum_probs=206.9

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeC-------------ChHHHHHHHHHHHhhCCCCceEEEeccCCC
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGARLVLPAR-------------SLKAAEEAKARLASDCPGSDIVVLPLDLSS   97 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r-------------~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~   97 (336)
                      .+++||++|||||++|||++++++|+++|++|++++|             +.+.+++..+.+...  +.++.++++|++|
T Consensus         7 ~~l~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~   84 (277)
T 3tsc_A            7 GKLEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAA--NRRIVAAVVDTRD   84 (277)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHT--TCCEEEEECCTTC
T ss_pred             cccCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhc--CCeEEEEECCCCC
Confidence            4689999999999999999999999999999999998             677777777777665  5689999999999


Q ss_pred             HHHHHHHHHHHHhcCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEc
Q 019722           98 LSSVRNFVSQFHSLNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVS  175 (336)
Q Consensus        98 ~~~v~~~~~~~~~~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vs  175 (336)
                      +++++++++++.+.++++|+||||||+....  .+.+.++|++++++|+.+++.++++++|.|.+++.    .|+||++|
T Consensus        85 ~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~----~g~iv~is  160 (277)
T 3tsc_A           85 FDRLRKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGR----GGSIILIS  160 (277)
T ss_dssp             HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTS----CEEEEEEC
T ss_pred             HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCC----CCEEEEEc
Confidence            9999999999999999999999999987654  57788999999999999999999999999988642    47999999


Q ss_pred             CCccccccCCcccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchh-HH
Q 019722          176 SSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGF-IT  254 (336)
Q Consensus       176 S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~-~~  254 (336)
                      |..+..+                 .+....|++||++++.|+++++.|+++.|  |+||+|+||+|+|++.+..... ..
T Consensus       161 S~~~~~~-----------------~~~~~~Y~asKaa~~~~~~~la~e~~~~g--i~vn~v~PG~v~T~~~~~~~~~~~~  221 (277)
T 3tsc_A          161 SAAGMKM-----------------QPFMIHYTASKHAVTGLARAFAAELGKHS--IRVNSVHPGPVNTPMGSGDMVTAVG  221 (277)
T ss_dssp             CGGGTSC-----------------CSSCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEESSBSSGGGSHHHHHHHH
T ss_pred             cHhhCCC-----------------CCCchhhHHHHHHHHHHHHHHHHHhCccC--eEEEEEEeCCCcCCcccchhhhhhh
Confidence            9988766                 66778999999999999999999999988  9999999999999997642100 00


Q ss_pred             HH----------HHHHHHhhcCChHHHHHHHHHHHhcCccccCCceeeccCcccc
Q 019722          255 DL----------VFFLTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAW  299 (336)
Q Consensus       255 ~~----------~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  299 (336)
                      ..          .......+..+|+|+|.+++|+++ +.+.++||+.+.++|+..
T Consensus       222 ~~~~~~~~~~~~~~~~~p~r~~~pedvA~~v~~L~s-~~~~~itG~~i~vdGG~~  275 (277)
T 3tsc_A          222 QAMETNPQLSHVLTPFLPDWVAEPEDIADTVCWLAS-DESRKVTAAQIPVDQGST  275 (277)
T ss_dssp             HHHHTCGGGTTTTCCSSSCSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTGG
T ss_pred             hcccccHHHHHHhhhccCCCCCCHHHHHHHHHHHhC-ccccCCcCCEEeeCCCcc
Confidence            00          000001245789999999999997 777899999999998753

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=100.00  E-value=6.2e-42  Score=309.15  Aligned_cols=244  Identities=23%  Similarity=0.252  Sum_probs=207.5

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCC------------hHHHHHHHHHHHhhCCCCceEEEeccCCC
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARS------------LKAAEEAKARLASDCPGSDIVVLPLDLSS   97 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~------------~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~   97 (336)
                      +++++||++|||||++|||+++|++|+++|++|++++|+            .+.+++..+.++..  +.++.++++|+++
T Consensus         5 m~~l~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~   82 (281)
T 3s55_A            5 MADFEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKT--GRRCISAKVDVKD   82 (281)
T ss_dssp             -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHT--TCCEEEEECCTTC
T ss_pred             ccccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhc--CCeEEEEeCCCCC
Confidence            678999999999999999999999999999999999997            56666766666654  5689999999999


Q ss_pred             HHHHHHHHHHHHhcCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEc
Q 019722           98 LSSVRNFVSQFHSLNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVS  175 (336)
Q Consensus        98 ~~~v~~~~~~~~~~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vs  175 (336)
                      +++++++++++.+.++++|+||||||+....  .+.+.++|++++++|+.+++.++++++|.|++++     .|+||++|
T Consensus        83 ~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-----~g~iv~is  157 (281)
T 3s55_A           83 RAALESFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRN-----YGRIVTVS  157 (281)
T ss_dssp             HHHHHHHHHHHHHHHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-----CEEEEEEC
T ss_pred             HHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-----CCEEEEEC
Confidence            9999999999999999999999999976543  6778899999999999999999999999998876     58999999


Q ss_pred             CCccccccCCcccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccc-----
Q 019722          176 SSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRERE-----  250 (336)
Q Consensus       176 S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~-----  250 (336)
                      |..+..+                 .++...|++||++++.|+++++.|+++.|  |+||+|+||+|+|++.+...     
T Consensus       158 S~~~~~~-----------------~~~~~~Y~asK~a~~~~~~~la~e~~~~g--i~vn~v~PG~v~t~~~~~~~~~~~~  218 (281)
T 3s55_A          158 SMLGHSA-----------------NFAQASYVSSKWGVIGLTKCAAHDLVGYG--ITVNAVAPGNIETPMTHNDFVFGTM  218 (281)
T ss_dssp             CGGGGSC-----------------CTTCHHHHHHHHHHHHHHHHHHHHTGGGT--EEEEEEEECSBCSTTTSSHHHHHC-
T ss_pred             ChhhcCC-----------------CCCCchhHHHHHHHHHHHHHHHHHHhhcC--cEEEEEecCcccCccccchhhhccc
Confidence            9988766                 66778999999999999999999999988  99999999999999976421     


Q ss_pred             ------hhHHHHHHH---H--HHhhcCChHHHHHHHHHHHhcCccccCCceeeccCccccc
Q 019722          251 ------GFITDLVFF---L--TSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWT  300 (336)
Q Consensus       251 ------~~~~~~~~~---~--~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~  300 (336)
                            .........   .  ...+...|+|+|.+++|+++ +.+.++||+.+.++|+...
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~dvA~~v~~L~s-~~~~~itG~~i~vdgG~~~  278 (281)
T 3s55_A          219 RPDLEKPTLKDVESVFASLHLQYAPFLKPEEVTRAVLFLVD-EASSHITGTVLPIDAGATA  278 (281)
T ss_dssp             ------CCHHHHHHHHHHHCSSSCSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTGGG
T ss_pred             cccccccchhHHHHHHHhhhccCcCCCCHHHHHHHHHHHcC-CcccCCCCCEEEECCCccc
Confidence                  001011110   0  11345689999999999997 7778999999999998654

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=100.00  E-value=8.3e-43  Score=314.64  Aligned_cols=239  Identities=26%  Similarity=0.282  Sum_probs=205.9

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcC
Q 019722           33 LSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLN  112 (336)
Q Consensus        33 l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  112 (336)
                      ++||++|||||++|||++++++|+++|++|++++|+.+++++..++++..  +.++.++++|++|+++++++++++.+.+
T Consensus        22 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   99 (279)
T 3sju_A           22 SRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAA--GHDVDGSSCDVTSTDEVHAAVAAAVERF   99 (279)
T ss_dssp             ---CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT--TCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            57999999999999999999999999999999999999999998888765  5789999999999999999999999999


Q ss_pred             CCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHH--HHHHhhccCCCCCeEEEEcCCccccccCCccc
Q 019722          113 LPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLK--KMIETAKATGIQGRIVNVSSSIHSWFSGDMIR  188 (336)
Q Consensus       113 ~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~--~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~  188 (336)
                      +++|+||||||+....  .+.+.++|++++++|+.|++.++++++|  .|++++     .|+||++||..+..+      
T Consensus       100 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~-----~g~iV~isS~~~~~~------  168 (279)
T 3sju_A          100 GPIGILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAG-----WGRIVNIASTGGKQG------  168 (279)
T ss_dssp             CSCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHT-----CEEEEEECCGGGTSC------
T ss_pred             CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcC-----CcEEEEECChhhccC------
Confidence            9999999999976543  5678899999999999999999999999  577665     489999999988766      


Q ss_pred             ccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccc------------hhHHHH
Q 019722          189 YLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRERE------------GFITDL  256 (336)
Q Consensus       189 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~------------~~~~~~  256 (336)
                                 .+....|++||++++.|+++++.|+++.|  |+||+|+||+|+|++.+...            ......
T Consensus       169 -----------~~~~~~Y~asKaa~~~l~~~la~e~~~~g--i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~  235 (279)
T 3sju_A          169 -----------VMYAAPYTASKHGVVGFTKSVGFELAKTG--ITVNAVCPGYVETPMAERVREGYARHWGVTEQEVHERF  235 (279)
T ss_dssp             -----------CTTCHHHHHHHHHHHHHHHHHHHHTGGGT--EEEEEEEESSBCSHHHHHHHHSCCSSSCCCHHHHHHHH
T ss_pred             -----------CCCChhHHHHHHHHHHHHHHHHHHHHhhC--cEEEEEeeCcccchHHHHHHhhhhhcccCChHHHHHHH
Confidence                       66778999999999999999999999988  99999999999999865421            111112


Q ss_pred             HHHHHHhhcCChHHHHHHHHHHHhcCccccCCceeeccCccc
Q 019722          257 VFFLTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEA  298 (336)
Q Consensus       257 ~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  298 (336)
                      ....+..+..+|+|+|.+++|+++ +.+.+++|+.+.++|+.
T Consensus       236 ~~~~p~~r~~~pedvA~~v~~L~s-~~a~~itG~~i~vdGG~  276 (279)
T 3sju_A          236 NAKIPLGRYSTPEEVAGLVGYLVT-DAAASITAQALNVCGGL  276 (279)
T ss_dssp             HTTCTTSSCBCHHHHHHHHHHHTS-SGGGGCCSCEEEESTTC
T ss_pred             HhcCCCCCCCCHHHHHHHHHHHhC-ccccCcCCcEEEECCCc
Confidence            222334556789999999999987 77889999999999875

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=100.00  E-value=6.3e-42  Score=309.01  Aligned_cols=241  Identities=22%  Similarity=0.245  Sum_probs=206.7

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeC-------------ChHHHHHHHHHHHhhCCCCceEEEeccCC
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPAR-------------SLKAAEEAKARLASDCPGSDIVVLPLDLS   96 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r-------------~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~   96 (336)
                      +++++||++|||||++|||++++++|+++|++|++++|             +.+.+++..++++..  +.++.++++|++
T Consensus        10 ~~~l~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~   87 (280)
T 3pgx_A           10 AGSLQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQ--GRKALTRVLDVR   87 (280)
T ss_dssp             -CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTT--TCCEEEEECCTT
T ss_pred             ccccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhc--CCeEEEEEcCCC
Confidence            56799999999999999999999999999999999998             677788887777665  678999999999


Q ss_pred             CHHHHHHHHHHHHhcCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEE
Q 019722           97 SLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNV  174 (336)
Q Consensus        97 ~~~~v~~~~~~~~~~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~v  174 (336)
                      ++++++++++++.+.++++|+||||||+....  .+.+.++|++++++|+.+++.++++++|.|++++.    +|+||++
T Consensus        88 ~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~----~g~iv~i  163 (280)
T 3pgx_A           88 DDAALRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGN----GGSIVVV  163 (280)
T ss_dssp             CHHHHHHHHHHHHHHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCS----CEEEEEE
T ss_pred             CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCC----CCEEEEE
Confidence            99999999999999999999999999986543  56788999999999999999999999999988632    4899999


Q ss_pred             cCCccccccCCcccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHH
Q 019722          175 SSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFIT  254 (336)
Q Consensus       175 sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~  254 (336)
                      ||..+..+                 .++...|++||++++.|+++++.|+++.|  |+||+|+||+|+|++.+...  ..
T Consensus       164 sS~~~~~~-----------------~~~~~~Y~asKaa~~~~~~~la~e~~~~g--i~vn~v~PG~v~t~~~~~~~--~~  222 (280)
T 3pgx_A          164 SSSAGLKA-----------------TPGNGHYSASKHGLTALTNTLAIELGEYG--IRVNSIHPYSVETPMIEPEA--MM  222 (280)
T ss_dssp             CCGGGTSC-----------------CTTBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCSTTCCHHH--HH
T ss_pred             cchhhccC-----------------CCCchhHHHHHHHHHHHHHHHHHHhhhcC--eEEEEEeeCcccCcccchhh--hh
Confidence            99988766                 67788999999999999999999999988  99999999999999976421  00


Q ss_pred             HHHHHH------------HHhhcCChHHHHHHHHHHHhcCccccCCceeeccCccc
Q 019722          255 DLVFFL------------TSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEA  298 (336)
Q Consensus       255 ~~~~~~------------~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  298 (336)
                      ......            ...+..+|+|+|.+++|+++ +.+.+++|+.+.++|+.
T Consensus       223 ~~~~~~~~~~~~~~~~~~~~~r~~~p~dvA~~v~~L~s-~~~~~itG~~i~vdGG~  277 (280)
T 3pgx_A          223 EIFARHPSFVHSFPPMPVQPNGFMTADEVADVVAWLAG-DGSGTLTGTQIPVDKGA  277 (280)
T ss_dssp             HHHHHCGGGGGGSCCBTTBCSSCBCHHHHHHHHHHHHS-GGGTTCSSCEEEESTTG
T ss_pred             hhhhcCchhhhhhhhcccCCCCCCCHHHHHHHHHHHhC-ccccCCCCCEEEECCCc
Confidence            011000            01134589999999999997 77889999999999874

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.7e-42  Score=312.71  Aligned_cols=248  Identities=21%  Similarity=0.252  Sum_probs=195.2

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeC-ChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPAR-SLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQF  108 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~  108 (336)
                      +.+++||++|||||++|||++++++|+++|++|++++| +.+.+++..+++...  +.++.++++|++|+++++++++++
T Consensus        24 m~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~  101 (280)
T 4da9_A           24 MTQKARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGL--GARVIFLRADLADLSSHQATVDAV  101 (280)
T ss_dssp             CSCCCCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHT--TCCEEEEECCTTSGGGHHHHHHHH
T ss_pred             hhccCCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHH
Confidence            44689999999999999999999999999999999995 777788888887765  568999999999999999999999


Q ss_pred             HhcCCCccEEEEcccCCC--C--CCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccC
Q 019722          109 HSLNLPLNLLINNAGKFA--H--QHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSG  184 (336)
Q Consensus       109 ~~~~~~id~lv~nAg~~~--~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~  184 (336)
                      .+.++++|+||||||+..  .  ..+.+.++|++++++|+.|++.++++++|.|++++.  ...|+||++||..+..+  
T Consensus       102 ~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~--~~~g~Iv~isS~~~~~~--  177 (280)
T 4da9_A          102 VAEFGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDA--RASRSIINITSVSAVMT--  177 (280)
T ss_dssp             HHHHSCCCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCC--CCCEEEEEECCC-------
T ss_pred             HHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCC--CCCCEEEEEcchhhccC--
Confidence            999999999999999832  2  256788999999999999999999999999987631  12479999999988776  


Q ss_pred             CcccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHH-HHH-HHHH
Q 019722          185 DMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITD-LVF-FLTS  262 (336)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~-~~~-~~~~  262 (336)
                                     .+....|++||++++.|+++++.|+++.|  |+||+|+||+|+|++.+........ ... ..+.
T Consensus       178 ---------------~~~~~~Y~asKaa~~~l~~~la~e~~~~g--I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~p~  240 (280)
T 4da9_A          178 ---------------SPERLDYCMSKAGLAAFSQGLALRLAETG--IAVFEVRPGIIRSDMTAAVSGKYDGLIESGLVPM  240 (280)
T ss_dssp             -----------------CCHHHHHHHHHHHHHHHHHHHHHTTTT--EEEEEEEECCBCC---------------------
T ss_pred             ---------------CCCccHHHHHHHHHHHHHHHHHHHHHHhC--cEEEEEeecCCcCCchhhcchhHHHHHhhcCCCc
Confidence                           66678899999999999999999999988  9999999999999998765332221 112 3455


Q ss_pred             hhcCChHHHHHHHHHHHhcCccccCCceeeccCcccccc
Q 019722          263 KLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWTS  301 (336)
Q Consensus       263 ~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~~  301 (336)
                      .+...|+|+|.+++|+++ +.+.+++|+.+.++|+....
T Consensus       241 ~r~~~pedvA~~v~~L~s-~~~~~itG~~i~vdGG~~~~  278 (280)
T 4da9_A          241 RRWGEPEDIGNIVAGLAG-GQFGFATGSVIQADGGLSIG  278 (280)
T ss_dssp             -CCBCHHHHHHHHHHHHT-STTGGGTTCEEEESTTCC--
T ss_pred             CCcCCHHHHHHHHHHHhC-ccccCCCCCEEEECCCcccC
Confidence            677899999999999998 77789999999999986543

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=100.00  E-value=1.9e-42  Score=306.65  Aligned_cols=239  Identities=22%  Similarity=0.274  Sum_probs=208.3

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeC-ChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhc
Q 019722           33 LSSVTAIITGATSGIGAETARVLAKRGARLVLPAR-SLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSL  111 (336)
Q Consensus        33 l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  111 (336)
                      +.+|++|||||++|||++++++|+++|++|++++| +.+.+++..++++..  +.++.++++|++|+++++++++++.+.
T Consensus         2 l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~~   79 (246)
T 3osu_A            2 KMTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAK--GVDSFAIQANVADADEVKAMIKEVVSQ   79 (246)
T ss_dssp             CCSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            46899999999999999999999999999999886 567777777777665  568999999999999999999999999


Q ss_pred             CCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcccc
Q 019722          112 NLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRY  189 (336)
Q Consensus       112 ~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~  189 (336)
                      ++++|+||||||+....  .+.+.++|++++++|+.+++.++++++|.|++++     .|+||++||..+..+       
T Consensus        80 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-----~g~iv~isS~~~~~~-------  147 (246)
T 3osu_A           80 FGSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQR-----SGAIINLSSVVGAVG-------  147 (246)
T ss_dssp             HSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-----CEEEEEECCHHHHHC-------
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-----CCEEEEEcchhhcCC-------
Confidence            99999999999986543  6778899999999999999999999999998876     589999999888776       


Q ss_pred             cccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhH-HHHHHHHHHhhcCCh
Q 019722          190 LGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFI-TDLVFFLTSKLLKTI  268 (336)
Q Consensus       190 ~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~-~~~~~~~~~~~~~~~  268 (336)
                                .++...|++||++++.|+++++.|+++.|  |+||+|+||++.|++.+...... .......+..+...|
T Consensus       148 ----------~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~r~~~~  215 (246)
T 3osu_A          148 ----------NPGQANYVATKAGVIGLTKSAARELASRG--ITVNAVAPGFIVSDMTDALSDELKEQMLTQIPLARFGQD  215 (246)
T ss_dssp             ----------CTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBGGGCCSCSCHHHHHHHHTTCTTCSCBCH
T ss_pred             ----------CCCChHHHHHHHHHHHHHHHHHHHhcccC--eEEEEEEECCCcCCcccccCHHHHHHHHhcCCCCCCcCH
Confidence                      66778999999999999999999999988  99999999999999987754322 222223345566789


Q ss_pred             HHHHHHHHHHHhcCccccCCceeeccCccc
Q 019722          269 PQGAATTCYVAIHPRLVNVSGKYFADCNEA  298 (336)
Q Consensus       269 ~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  298 (336)
                      +|++.+++|+++ +.+.+++|+.+.++|+.
T Consensus       216 ~dva~~v~~l~s-~~~~~itG~~i~vdgG~  244 (246)
T 3osu_A          216 TDIANTVAFLAS-DKAKYITGQTIHVNGGM  244 (246)
T ss_dssp             HHHHHHHHHHTS-GGGTTCCSCEEEESTTS
T ss_pred             HHHHHHHHHHhC-ccccCCCCCEEEeCCCc
Confidence            999999999987 67789999999999874

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=100.00  E-value=3e-42  Score=309.75  Aligned_cols=237  Identities=30%  Similarity=0.354  Sum_probs=206.6

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHh
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHS  110 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  110 (336)
                      ++++||++|||||++|||++++++|+++|++|++++|+.+++++..+++     +.++.++++|++++++++++++++.+
T Consensus         7 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~   81 (271)
T 3tzq_B            7 AELENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASV-----GRGAVHHVVDLTNEVSVRALIDFTID   81 (271)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHH-----CTTCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh-----CCCeEEEECCCCCHHHHHHHHHHHHH
Confidence            4789999999999999999999999999999999999998888777666     56789999999999999999999999


Q ss_pred             cCCCccEEEEcccCCCC-C---CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCc
Q 019722          111 LNLPLNLLINNAGKFAH-Q---HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDM  186 (336)
Q Consensus       111 ~~~~id~lv~nAg~~~~-~---~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~  186 (336)
                      .++++|+||||||+... .   .+.+.++|++++++|+.+++.++++++|.|++++     .|+||++||..+..+    
T Consensus        82 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-----~g~iv~isS~~~~~~----  152 (271)
T 3tzq_B           82 TFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAG-----GGAIVNISSATAHAA----  152 (271)
T ss_dssp             HHSCCCEEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----CEEEEEECCGGGTSB----
T ss_pred             HcCCCCEEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-----CCEEEEECCHHHcCC----
Confidence            99999999999998633 1   4678899999999999999999999999998865     589999999988766    


Q ss_pred             ccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCcc-ch-hHHHHHHHHHHhh
Q 019722          187 IRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRER-EG-FITDLVFFLTSKL  264 (336)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~-~~-~~~~~~~~~~~~~  264 (336)
                                   .+....|++||++++.|+++++.|+++.|  |+||+|+||+|+|++.+.. .. .........+..+
T Consensus       153 -------------~~~~~~Y~asKaa~~~l~~~la~e~~~~g--i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~r  217 (271)
T 3tzq_B          153 -------------YDMSTAYACTKAAIETLTRYVATQYGRHG--VRCNAIAPGLVRTPRLEVGLPQPIVDIFATHHLAGR  217 (271)
T ss_dssp             -------------CSSCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCBCCTTTC---CHHHHHHHHTTSTTSS
T ss_pred             -------------CCCChHHHHHHHHHHHHHHHHHHHHhhcC--EEEEEEEeCCCcCccccccCCHHHHHHHHhcCCCCC
Confidence                         66778999999999999999999999988  9999999999999998732 21 1222222334456


Q ss_pred             cCChHHHHHHHHHHHhcCccccCCceeeccCcc
Q 019722          265 LKTIPQGAATTCYVAIHPRLVNVSGKYFADCNE  297 (336)
Q Consensus       265 ~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~  297 (336)
                      ..+|+|+|..++|+++ +.+.++||+.+.++|+
T Consensus       218 ~~~p~dvA~~v~~L~s-~~~~~itG~~i~vdGG  249 (271)
T 3tzq_B          218 IGEPHEIAELVCFLAS-DRAAFITGQVIAADSG  249 (271)
T ss_dssp             CBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTT
T ss_pred             CcCHHHHHHHHHHHhC-cccCCcCCCEEEECCC
Confidence            6789999999999997 7788999999999998

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=100.00  E-value=3.2e-42  Score=311.09  Aligned_cols=244  Identities=24%  Similarity=0.244  Sum_probs=203.0

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeC-ChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPAR-SLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQF  108 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~  108 (336)
                      +++|++|++|||||++|||+++|++|+++|++|++++| +.+.+++..+++.... +.++.++++|++++++++++++++
T Consensus        20 ~~~l~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~d~~~v~~~~~~~   98 (281)
T 3v2h_A           20 FQSMMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLS-SGTVLHHPADMTKPSEIADMMAMV   98 (281)
T ss_dssp             --CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTC-SSCEEEECCCTTCHHHHHHHHHHH
T ss_pred             hhccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhcc-CCcEEEEeCCCCCHHHHHHHHHHH
Confidence            66799999999999999999999999999999999999 6677777777776542 468999999999999999999999


Q ss_pred             HhcCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCc
Q 019722          109 HSLNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDM  186 (336)
Q Consensus       109 ~~~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~  186 (336)
                      .+.++++|+||||||+....  .+.+.++|++++++|+.|++.++++++|.|++++     .|+||++||..+..+    
T Consensus        99 ~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-----~g~iv~isS~~~~~~----  169 (281)
T 3v2h_A           99 ADRFGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKG-----WGRIINIASAHGLVA----  169 (281)
T ss_dssp             HHHTSSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-----CEEEEEECCGGGTSC----
T ss_pred             HHHCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-----CCEEEEECCcccccC----
Confidence            99999999999999986543  5678899999999999999999999999998875     589999999988766    


Q ss_pred             ccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHH------------
Q 019722          187 IRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFIT------------  254 (336)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~------------  254 (336)
                                   .+....|++||++++.|+++++.|+++.|  |+||+|+||+|+|++.+.......            
T Consensus       170 -------------~~~~~~Y~asKaa~~~l~~~la~e~~~~g--I~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~  234 (281)
T 3v2h_A          170 -------------SPFKSAYVAAKHGIMGLTKTVALEVAESG--VTVNSICPGYVLTPLVEKQIPDQARTRGITEEQVIN  234 (281)
T ss_dssp             -------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCC-----------------------
T ss_pred             -------------CCCchHHHHHHHHHHHHHHHHHHHhhhcC--cEEEEEECCCCcCcchhhhcchhhhhcCCCHHHHHH
Confidence                         66778999999999999999999999988  999999999999999765321100            


Q ss_pred             -HHHHHHHHhhcCChHHHHHHHHHHHhcCccccCCceeeccCcccc
Q 019722          255 -DLVFFLTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAW  299 (336)
Q Consensus       255 -~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  299 (336)
                       ......+..+...|+|+|.+++|+++ +.+.+++|+.+.++|+..
T Consensus       235 ~~~~~~~p~~r~~~~edvA~~v~~L~s-~~a~~itG~~i~vdGG~~  279 (281)
T 3v2h_A          235 EVMLKGQPTKKFITVEQVASLALYLAG-DDAAQITGTHVSMDGGWT  279 (281)
T ss_dssp             -----CCTTCSCBCHHHHHHHHHHHHS-SGGGGCCSCEEEESTTGG
T ss_pred             HHHHhcCCCCCccCHHHHHHHHHHHcC-CCcCCCCCcEEEECCCcc
Confidence             01111234456789999999999997 777899999999998753

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=100.00  E-value=2.9e-42  Score=310.14  Aligned_cols=244  Identities=25%  Similarity=0.272  Sum_probs=207.2

Q ss_pred             ccCCCCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHH
Q 019722           26 VTDGCPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFV  105 (336)
Q Consensus        26 ~~~~~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~  105 (336)
                      |+. .++++||++|||||++|||+++|++|+++|++|++++|+ +..++..+++...  +.++.++++|++|+++++++.
T Consensus        23 m~~-~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~-~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~   98 (273)
T 3uf0_A           23 MTG-PFSLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRT-DGVKEVADEIADG--GGSAEAVVADLADLEGAANVA   98 (273)
T ss_dssp             --C-TTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS-THHHHHHHHHHTT--TCEEEEEECCTTCHHHHHHHH
T ss_pred             ccc-ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCH-HHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHH
Confidence            554 678999999999999999999999999999999999976 4456667777654  568999999999999999995


Q ss_pred             HHHHhcCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCcccccc
Q 019722          106 SQFHSLNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFS  183 (336)
Q Consensus       106 ~~~~~~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~  183 (336)
                      +.+ +.++++|+||||||+....  .+.+.++|++++++|+.|++.++++++|.|++++     .|+||++||..+..+ 
T Consensus        99 ~~~-~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-----~g~IV~isS~~~~~~-  171 (273)
T 3uf0_A           99 EEL-AATRRVDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHG-----SGRIVTIASMLSFQG-  171 (273)
T ss_dssp             HHH-HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-----CEEEEEECCGGGTSC-
T ss_pred             HHH-HhcCCCcEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-----CCEEEEEcchHhcCC-
Confidence            554 4468999999999987543  5678899999999999999999999999998876     589999999988766 


Q ss_pred             CCcccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccc---hhHHHHHHHH
Q 019722          184 GDMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRERE---GFITDLVFFL  260 (336)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~---~~~~~~~~~~  260 (336)
                                      .++...|++||++++.|+++++.|+++.|  |+||+|+||+|.|++.....   ..........
T Consensus       172 ----------------~~~~~~Y~asKaa~~~l~~~la~e~~~~g--I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~  233 (273)
T 3uf0_A          172 ----------------GRNVAAYAASKHAVVGLTRALASEWAGRG--VGVNALAPGYVVTANTAALRADDERAAEITARI  233 (273)
T ss_dssp             ----------------CSSCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCSGGGHHHHTSHHHHHHHHHHS
T ss_pred             ----------------CCCChhHHHHHHHHHHHHHHHHHHHhhcC--cEEEEEEeCCCcCCchhhcccCHHHHHHHHhcC
Confidence                            66778999999999999999999999988  99999999999999876542   2222333344


Q ss_pred             HHhhcCChHHHHHHHHHHHhcCccccCCceeeccCcccc
Q 019722          261 TSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAW  299 (336)
Q Consensus       261 ~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  299 (336)
                      +..+..+|+|+|.+++|+++ +.+.+++|+.+.++|+..
T Consensus       234 p~~r~~~pedva~~v~~L~s-~~a~~itG~~i~vdGG~~  271 (273)
T 3uf0_A          234 PAGRWATPEDMVGPAVFLAS-DAASYVHGQVLAVDGGWL  271 (273)
T ss_dssp             TTSSCBCGGGGHHHHHHHHS-GGGTTCCSCEEEESTTGG
T ss_pred             CCCCCCCHHHHHHHHHHHhC-chhcCCcCCEEEECcCcc
Confidence            55667899999999999997 777899999999998754

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=100.00  E-value=1.3e-42  Score=315.18  Aligned_cols=270  Identities=34%  Similarity=0.453  Sum_probs=214.1

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      +++++||++|||||++|||++++++|+++|++|++++|+.+++++..+++     +.++.++++|++|+++++++++++ 
T Consensus        11 ~~~l~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dl~d~~~v~~~~~~~-   84 (291)
T 3rd5_A           11 LPSFAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTM-----AGQVEVRELDLQDLSSVRRFADGV-   84 (291)
T ss_dssp             CCCCTTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTS-----SSEEEEEECCTTCHHHHHHHHHTC-
T ss_pred             ccCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-----cCCeeEEEcCCCCHHHHHHHHHhc-
Confidence            77899999999999999999999999999999999999998877665544     468999999999999999998865 


Q ss_pred             hcCCCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcccc
Q 019722          110 SLNLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRY  189 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~  189 (336)
                         +++|+||||||+.....+.+.++|++++++|+.+++.++++++|.|.         .|||++||.++..+....   
T Consensus        85 ---~~iD~lv~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~---------~riv~isS~~~~~~~~~~---  149 (291)
T 3rd5_A           85 ---SGADVLINNAGIMAVPYALTVDGFESQIGTNHLGHFALTNLLLPRLT---------DRVVTVSSMAHWPGRINL---  149 (291)
T ss_dssp             ---CCEEEEEECCCCCSCCCCBCTTSCBHHHHHHTHHHHHHHHHHGGGEE---------EEEEEECCGGGTTCCCCS---
T ss_pred             ---CCCCEEEECCcCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHH---------hheeEeechhhccCCCCc---
Confidence               68999999999887667778899999999999999999999999984         389999998877543211   


Q ss_pred             cccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHHHHHHHHhhcC-Ch
Q 019722          190 LGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSKLLK-TI  268 (336)
Q Consensus       190 ~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~-~~  268 (336)
                      .+. ......+++...|++||++++.|++.+++++++.|.+|+||+|+||+|+|++.+.............+..+.. +|
T Consensus       150 ~~~-~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (291)
T 3rd5_A          150 EDL-NWRSRRYSPWLAYSQSKLANLLFTSELQRRLTAAGSPLRALAAHPGYSHTNLQGASGRKLGDALMSAATRVVATDA  228 (291)
T ss_dssp             SCT-TCSSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEECCSGGGSCC--------------------CHHH
T ss_pred             ccc-cccccCCCCcchHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEeeCCCCccccccccchHHHHHHHHHHHHHHhCCH
Confidence            111 1112236788899999999999999999999988777999999999999999887543333322223333333 48


Q ss_pred             HHHHHHHHHHHhcCccccCCceeeccCcccc-------cccCCCCHHHHHHHHHHHHHhhccC
Q 019722          269 PQGAATTCYVAIHPRLVNVSGKYFADCNEAW-------TSKLGSNSNEASRLWAASELLVSRD  324 (336)
Q Consensus       269 ~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~-------~~~~~~~~~~~~~~w~~~~~~~~~~  324 (336)
                      +++|.+++|+++.   .+++|+++.++|+..       .++...|.+..+++|++++++++..
T Consensus       229 ~~~A~~~~~l~~~---~~~~G~~~~vdgG~~~~~~~~~~~~~~~~~~~~~~lw~~~~~~~~~~  288 (291)
T 3rd5_A          229 DFGARQTLYAASQ---DLPGDSFVGPRFGYLGRTQPVGRSRRAKDAGMAAALWALSEQLTKTE  288 (291)
T ss_dssp             HHHHHHHHHHHHS---CCCTTCEEEETTSSSSCEEECCCCTGGGCHHHHHHHHHHHHHHHTCC
T ss_pred             HHHHHHHHHHHcC---CCCCCceeCCcccccCccccCCCCcccCCHHHHHHHHHHHHHHHccc
Confidence            9999999999985   378999999887532       2456778999999999999999864

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=100.00  E-value=1.1e-42  Score=313.11  Aligned_cols=240  Identities=22%  Similarity=0.250  Sum_probs=209.5

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      .++++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++...  +.++.++++|++++++++.+++++.
T Consensus        28 ~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~~~~~~~~~~  105 (275)
T 4imr_A           28 IFGLRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIAS--GGTAQELAGDLSEAGAGTDLIERAE  105 (275)
T ss_dssp             HHCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHT--TCCEEEEECCTTSTTHHHHHHHHHH
T ss_pred             cCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc--CCeEEEEEecCCCHHHHHHHHHHHH
Confidence            35789999999999999999999999999999999999999888888888765  6789999999999999999999998


Q ss_pred             hcCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcc
Q 019722          110 SLNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMI  187 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~  187 (336)
                      +. +++|+||||||+....  .+.+.++|++++++|+.|++.++++++|.|++++     .|+||++||..+..+     
T Consensus       106 ~~-g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-----~g~Iv~isS~~~~~~-----  174 (275)
T 4imr_A          106 AI-APVDILVINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARK-----WGRVVSIGSINQLRP-----  174 (275)
T ss_dssp             HH-SCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-----CEEEEEECCGGGTSC-----
T ss_pred             Hh-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-----CcEEEEECCHHhCCC-----
Confidence            87 8999999999976543  5678899999999999999999999999998875     589999999887664     


Q ss_pred             cccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccc----hhHHHHHHHH-HH
Q 019722          188 RYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRERE----GFITDLVFFL-TS  262 (336)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~----~~~~~~~~~~-~~  262 (336)
                                  .+....|++||++++.|+++++.|+++.|  |+||+|+||+|+|++.....    .......... +.
T Consensus       175 ------------~~~~~~Y~asKaa~~~l~~~la~e~~~~g--I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~  240 (275)
T 4imr_A          175 ------------KSVVTAYAATKAAQHNLIQSQARDFAGDN--VLLNTLAPGLVDTDRNADRRAQDPEGWDEYVRTLNWM  240 (275)
T ss_dssp             ------------CTTBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEESSBCSHHHHHHHHHCHHHHHHHHHHHSTT
T ss_pred             ------------CCCchhhHHHHHHHHHHHHHHHHHhcccC--cEEEEEEeccccCcccccccccChHHHHHHHhhcCcc
Confidence                        56677899999999999999999999988  99999999999999876532    1222223333 45


Q ss_pred             hhcCChHHHHHHHHHHHhcCccccCCceeeccCcc
Q 019722          263 KLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNE  297 (336)
Q Consensus       263 ~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~  297 (336)
                      .+..+|+|+|.+++|+++ +.++++||+.+.++|+
T Consensus       241 ~r~~~pedvA~~v~fL~s-~~a~~itG~~i~vdGG  274 (275)
T 4imr_A          241 GRAGRPEEMVGAALFLAS-EACSFMTGETIFLTGG  274 (275)
T ss_dssp             CSCBCGGGGHHHHHHHHS-GGGTTCCSCEEEESSC
T ss_pred             CCCcCHHHHHHHHHHHcC-cccCCCCCCEEEeCCC
Confidence            567789999999999997 7788999999999886

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=100.00  E-value=2.4e-42  Score=310.28  Aligned_cols=241  Identities=22%  Similarity=0.275  Sum_probs=210.4

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCC-hHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARS-LKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQF  108 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~-~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~  108 (336)
                      .++++||++|||||++|||++++++|+++|++|++++++ .+..++..++++..  +.++.++++|++|+++++++++++
T Consensus        26 ~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~Dv~d~~~v~~~~~~~  103 (271)
T 3v2g_A           26 SISLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQA--GGRAVAIRADNRDAEAIEQAIRET  103 (271)
T ss_dssp             TTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHHHHHHHH
Confidence            567999999999999999999999999999999998654 56677777777665  568999999999999999999999


Q ss_pred             HhcCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCc
Q 019722          109 HSLNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDM  186 (336)
Q Consensus       109 ~~~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~  186 (336)
                      .+.++++|+||||||+....  .+.+.++|++++++|+.+++.++++++|.|++       .|+||++||..+...+   
T Consensus       104 ~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~-------~g~iv~isS~~~~~~~---  173 (271)
T 3v2g_A          104 VEALGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGD-------GGRIITIGSNLAELVP---  173 (271)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCT-------TCEEEEECCGGGTCCC---
T ss_pred             HHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc-------CCEEEEEeChhhccCC---
Confidence            99999999999999986543  57788999999999999999999999999954       4899999997665431   


Q ss_pred             ccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHHHHHHHHhhcC
Q 019722          187 IRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSKLLK  266 (336)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~  266 (336)
                                   .++...|++||++++.|+++++.|+++.|  |+||+|+||+|+|++...............+..+..
T Consensus       174 -------------~~~~~~Y~asKaa~~~l~~~la~e~~~~g--Irvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~r~~  238 (271)
T 3v2g_A          174 -------------WPGISLYSASKAALAGLTKGLARDLGPRG--ITVNIVHPGSTDTDMNPADGDHAEAQRERIATGSYG  238 (271)
T ss_dssp             -------------STTCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECSBCSSSSCSSCSSHHHHHHTCTTSSCB
T ss_pred             -------------CCCchHHHHHHHHHHHHHHHHHHHhhhhC--eEEEEEecCCCcCCcccccchhHHHHHhcCCCCCCC
Confidence                         46678899999999999999999999988  999999999999999876555555555555666778


Q ss_pred             ChHHHHHHHHHHHhcCccccCCceeeccCccc
Q 019722          267 TIPQGAATTCYVAIHPRLVNVSGKYFADCNEA  298 (336)
Q Consensus       267 ~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  298 (336)
                      .|+|+|..++|+++ +.+.++||+.+.++|+.
T Consensus       239 ~pedvA~~v~fL~s-~~~~~itG~~i~vdGG~  269 (271)
T 3v2g_A          239 EPQDIAGLVAWLAG-PQGKFVTGASLTIDGGA  269 (271)
T ss_dssp             CHHHHHHHHHHHHS-GGGTTCCSCEEEESTTT
T ss_pred             CHHHHHHHHHHHhC-cccCCccCCEEEeCcCc
Confidence            99999999999987 77899999999999874

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=100.00  E-value=3.5e-42  Score=308.25  Aligned_cols=259  Identities=19%  Similarity=0.200  Sum_probs=210.7

Q ss_pred             CCCCCCCCccccccCCCCCCCCCEEEEeCCC-ChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEe
Q 019722           14 ASGYGSKSTAEQVTDGCPNLSSVTAIITGAT-SGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLP   92 (336)
Q Consensus        14 ~~~~~~~~~~~~~~~~~~~l~gk~~lItGgs-~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~   92 (336)
                      +..+.....+..+.. +++++||++|||||+ +|||++++++|+++|++|++++|+.+++++..+++++.. +.++.+++
T Consensus         2 ~~~~~~~~~~~~~~~-~~~l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~   79 (266)
T 3o38_A            2 PGSMNLSEAPKEIDG-HGLLKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLG-LGRVEAVV   79 (266)
T ss_dssp             ----CTTSCCCCCCC-CSTTTTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTC-SSCEEEEE
T ss_pred             CCCcccccCcccccc-ccCCCCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcC-CCceEEEE
Confidence            334444445555554 778999999999998 599999999999999999999999999999888886653 46899999


Q ss_pred             ccCCCHHHHHHHHHHHHhcCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCe
Q 019722           93 LDLSSLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGR  170 (336)
Q Consensus        93 ~Dl~~~~~v~~~~~~~~~~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~gr  170 (336)
                      +|++++++++++++++.+.++++|+||||||+....  .+.+.++|++++++|+.+++.++++++|.|++++.    .++
T Consensus        80 ~Dl~~~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~----~~~  155 (266)
T 3o38_A           80 CDVTSTEAVDALITQTVEKAGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDH----GGV  155 (266)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSC----CEE
T ss_pred             eCCCCHHHHHHHHHHHHHHhCCCcEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC----CeE
Confidence            999999999999999999999999999999976543  56788999999999999999999999999987522    589


Q ss_pred             EEEEcCCccccccCCcccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccc
Q 019722          171 IVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRERE  250 (336)
Q Consensus       171 IV~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~  250 (336)
                      ||++||..+..+                 .++...|++||++++.|+++++.|+++.|  |+||+|+||+|+|++.+...
T Consensus       156 iv~~sS~~~~~~-----------------~~~~~~Y~~sKaa~~~~~~~la~e~~~~g--i~v~~v~PG~v~t~~~~~~~  216 (266)
T 3o38_A          156 IVNNASVLGWRA-----------------QHSQSHYAAAKAGVMALTRCSAIEAVEFG--VRINAVSPSIARHKFLEKTS  216 (266)
T ss_dssp             EEEECCGGGTCC-----------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCCCC-------
T ss_pred             EEEeCCHHHcCC-----------------CCCCchHHHHHHHHHHHHHHHHHHHHHcC--cEEEEEeCCcccchhhhccC
Confidence            999999888765                 66788999999999999999999999988  99999999999999977642


Q ss_pred             h--hHHHHHHHHHHhhcCChHHHHHHHHHHHhcCccccCCceeeccCccc
Q 019722          251 G--FITDLVFFLTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEA  298 (336)
Q Consensus       251 ~--~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  298 (336)
                      .  .........+..+..+|+|+|.+++|+++ +...+++|+.+.++|+.
T Consensus       217 ~~~~~~~~~~~~~~~r~~~~~dva~~i~~l~s-~~~~~~tG~~i~vdgG~  265 (266)
T 3o38_A          217 SSELLDRLASDEAFGRAAEPWEVAATIAFLAS-DYSSYMTGEVVSVSSQR  265 (266)
T ss_dssp             ----------CCTTSSCCCHHHHHHHHHHHHS-GGGTTCCSCEEEESSCC
T ss_pred             cHHHHHHHHhcCCcCCCCCHHHHHHHHHHHcC-ccccCccCCEEEEcCCc
Confidence            1  12222222334556789999999999987 67789999999998864

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=100.00  E-value=7.5e-42  Score=302.75  Aligned_cols=242  Identities=26%  Similarity=0.360  Sum_probs=213.3

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHh
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHS  110 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  110 (336)
                      |++++|++|||||++|||++++++|+++|++|++++|+.+..++..++++..  +.++.++++|++++++++++++++.+
T Consensus         1 m~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   78 (247)
T 3lyl_A            1 MSLNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEK--GFKARGLVLNISDIESIQNFFAEIKA   78 (247)
T ss_dssp             CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHHHH
Confidence            5789999999999999999999999999999999999999998888888765  56899999999999999999999999


Q ss_pred             cCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccc
Q 019722          111 LNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIR  188 (336)
Q Consensus       111 ~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~  188 (336)
                      .++++|+||||||+....  .+.+.++|++.+++|+.+++.++++++|.|.+++     .|+||++||..+..+      
T Consensus        79 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-----~g~iv~isS~~~~~~------  147 (247)
T 3lyl_A           79 ENLAIDILVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKR-----WGRIISIGSVVGSAG------  147 (247)
T ss_dssp             TTCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-----CEEEEEECCTHHHHC------
T ss_pred             HcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-----CeEEEEEcchhhccC------
Confidence            999999999999987543  5678899999999999999999999999998876     589999999988776      


Q ss_pred             ccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHHH-HHHHHhhcCC
Q 019722          189 YLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLV-FFLTSKLLKT  267 (336)
Q Consensus       189 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~-~~~~~~~~~~  267 (336)
                                 .++...|++||++++.|+++++.|+++.|  |+||+|+||++.|++.+.......... ...+..+...
T Consensus       148 -----------~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~  214 (247)
T 3lyl_A          148 -----------NPGQTNYCAAKAGVIGFSKSLAYEVASRN--ITVNVVAPGFIATDMTDKLTDEQKSFIATKIPSGQIGE  214 (247)
T ss_dssp             -----------CTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCTTTTTSCHHHHHHHHTTSTTCCCBC
T ss_pred             -----------CCCcHHHHHHHHHHHHHHHHHHHHHHHcC--eEEEEEeeCcEecccchhccHHHHHHHhhcCCCCCCcC
Confidence                       66778999999999999999999999988  999999999999999887644332222 2233445678


Q ss_pred             hHHHHHHHHHHHhcCccccCCceeeccCcccc
Q 019722          268 IPQGAATTCYVAIHPRLVNVSGKYFADCNEAW  299 (336)
Q Consensus       268 ~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  299 (336)
                      |+|+|.+++|+++ +...+++|+.+..+|+..
T Consensus       215 ~~dva~~i~~l~s-~~~~~~tG~~i~vdgG~~  245 (247)
T 3lyl_A          215 PKDIAAAVAFLAS-EEAKYITGQTLHVNGGMY  245 (247)
T ss_dssp             HHHHHHHHHHHHS-GGGTTCCSCEEEESTTSS
T ss_pred             HHHHHHHHHHHhC-CCcCCccCCEEEECCCEe
Confidence            9999999999987 667899999999998754

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=100.00  E-value=3.2e-42  Score=309.32  Aligned_cols=240  Identities=23%  Similarity=0.245  Sum_probs=204.9

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeC-ChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPAR-SLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQF  108 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~  108 (336)
                      +.+++||++|||||++|||++++++|+++|++|+++++ +.+.+++..++++..  +.++.++++|++|+++++++++++
T Consensus        13 ~~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~   90 (270)
T 3is3_A           13 PGRLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKAL--GSDAIAIKADIRQVPEIVKLFDQA   90 (270)
T ss_dssp             TTCCTTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCCEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCcCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHH
Confidence            56799999999999999999999999999999999775 566677777777665  578999999999999999999999


Q ss_pred             HhcCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCcc-ccccCC
Q 019722          109 HSLNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIH-SWFSGD  185 (336)
Q Consensus       109 ~~~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~-~~~~~~  185 (336)
                      .+.++++|+||||||+....  .+.+.++|++++++|+.+++.++++++|.|++       .|+||++||..+ ..+   
T Consensus        91 ~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~-------~g~iv~isS~~~~~~~---  160 (270)
T 3is3_A           91 VAHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTE-------GGRIVLTSSNTSKDFS---  160 (270)
T ss_dssp             HHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCT-------TCEEEEECCTTTTTCC---
T ss_pred             HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc-------CCeEEEEeCchhccCC---
Confidence            99999999999999986543  57788999999999999999999999999965       379999999873 333   


Q ss_pred             cccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccc-------------hh
Q 019722          186 MIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRERE-------------GF  252 (336)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~-------------~~  252 (336)
                                    .++...|++||++++.|+++++.|+++.|  |+||+|+||+|+|++.+...             ..
T Consensus       161 --------------~~~~~~Y~asKaa~~~~~~~la~e~~~~g--i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~  224 (270)
T 3is3_A          161 --------------VPKHSLYSGSKGAVDSFVRIFSKDCGDKK--ITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQR  224 (270)
T ss_dssp             --------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECSBCSTTHHHHGGGGSTTGGGSCHHHH
T ss_pred             --------------CCCCchhHHHHHHHHHHHHHHHHHhcccC--eEEEEEEeCCccChhhhhhhhhccccccccchHHH
Confidence                          56778999999999999999999999988  99999999999999876321             11


Q ss_pred             HHHHHHHHHHhhcCChHHHHHHHHHHHhcCccccCCceeeccCccc
Q 019722          253 ITDLVFFLTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEA  298 (336)
Q Consensus       253 ~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  298 (336)
                      ........+..+...|+|+|.+++|+++ +.+.++||+.+.++|+.
T Consensus       225 ~~~~~~~~p~~r~~~p~dvA~~v~~L~s-~~~~~itG~~i~vdGG~  269 (270)
T 3is3_A          225 QQMAAHASPLHRNGWPQDVANVVGFLVS-KEGEWVNGKVLTLDGGA  269 (270)
T ss_dssp             HHHHHHHSTTCSCBCHHHHHHHHHHHTS-GGGTTCCSCEEEESTTC
T ss_pred             HHHHHhcCCCCCCCCHHHHHHHHHHHcC-CccCCccCcEEEeCCCC
Confidence            1122223345567789999999999997 77899999999999863

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=100.00  E-value=1.7e-42  Score=308.60  Aligned_cols=238  Identities=24%  Similarity=0.216  Sum_probs=205.6

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      |.+++||++|||||++|||++++++|+++|++|++++|+.+.+++..+++     +.++.++++|++|+++++++++++.
T Consensus         3 m~~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~   77 (255)
T 4eso_A            3 MGNYQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEF-----GPRVHALRSDIADLNEIAVLGAAAG   77 (255)
T ss_dssp             -CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----GGGEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCcceEEEccCCCHHHHHHHHHHHH
Confidence            45799999999999999999999999999999999999998888777665     4589999999999999999999999


Q ss_pred             hcCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcc
Q 019722          110 SLNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMI  187 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~  187 (336)
                      +.++++|+||||||+....  .+.+.++|++++++|+.+++.++++++|.|++       .|+||++||.++..+     
T Consensus        78 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~-------~g~iv~isS~~~~~~-----  145 (255)
T 4eso_A           78 QTLGAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIRE-------GGSIVFTSSVADEGG-----  145 (255)
T ss_dssp             HHHSSEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE-------EEEEEEECCGGGSSB-----
T ss_pred             HHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhc-------CCEEEEECChhhcCC-----
Confidence            9999999999999986543  56788999999999999999999999998854       379999999988766     


Q ss_pred             cccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccc--h-hHH----HHHHHH
Q 019722          188 RYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRERE--G-FIT----DLVFFL  260 (336)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~--~-~~~----~~~~~~  260 (336)
                                  .++...|++||++++.|+++++.|+++.|  |+||+|+||+|+|++.+...  . ...    ......
T Consensus       146 ------------~~~~~~Y~asKaa~~~~~~~la~e~~~~g--i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~  211 (255)
T 4eso_A          146 ------------HPGMSVYSASKAALVSFASVLAAELLPRG--IRVNSVSPGFIDTPTKGVAGITEAERAEFKTLGDNIT  211 (255)
T ss_dssp             ------------CTTBHHHHHHHHHHHHHHHHHHHHTGGGT--CEEEEEEECSBCCSSTTCTTSCHHHHHHHHHHHHHHS
T ss_pred             ------------CCCchHHHHHHHHHHHHHHHHHHHHhhhC--cEEEEEecCcccCcccccccCChhhHHHHHHHHhccC
Confidence                        67788999999999999999999999988  99999999999999876421  1 111    111223


Q ss_pred             HHhhcCChHHHHHHHHHHHhcCccccCCceeeccCccccc
Q 019722          261 TSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWT  300 (336)
Q Consensus       261 ~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~  300 (336)
                      +..+..+|+|+|.+++|+++ + ++++||+.+.++|+...
T Consensus       212 p~~r~~~pedvA~~v~~L~s-~-~~~itG~~i~vdGG~~~  249 (255)
T 4eso_A          212 PMKRNGTADEVARAVLFLAF-E-ATFTTGAKLAVDGGLGQ  249 (255)
T ss_dssp             TTSSCBCHHHHHHHHHHHHH-T-CTTCCSCEEEESTTTTT
T ss_pred             CCCCCcCHHHHHHHHHHHcC-c-CcCccCCEEEECCCccc
Confidence            44566789999999999998 5 78999999999998543

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=100.00  E-value=6.6e-42  Score=307.58  Aligned_cols=258  Identities=22%  Similarity=0.230  Sum_probs=189.0

Q ss_pred             CCCCCCCCCccccccCCCCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEe
Q 019722           13 GASGYGSKSTAEQVTDGCPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLP   92 (336)
Q Consensus        13 ~~~~~~~~~~~~~~~~~~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~   92 (336)
                      |++|+-...+.-.+.. +.++.+|++|||||++|||++++++|+++|++|++++|+.+.+++..+++     +.++.+++
T Consensus         7 ~~~~~~~~~~~~~~~~-m~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~   80 (272)
T 4dyv_A            7 HSSGVDLGTENLYFQS-MSKTGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEI-----GDDALCVP   80 (272)
T ss_dssp             ----------------------CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----TSCCEEEE
T ss_pred             ccccccCCcceeehhh-hcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-----CCCeEEEE
Confidence            3445544444444444 66789999999999999999999999999999999999999888877776     45789999


Q ss_pred             ccCCCHHHHHHHHHHHHhcCCCccEEEEcccCCCC---CCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCC
Q 019722           93 LDLSSLSSVRNFVSQFHSLNLPLNLLINNAGKFAH---QHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQG  169 (336)
Q Consensus        93 ~Dl~~~~~v~~~~~~~~~~~~~id~lv~nAg~~~~---~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~g  169 (336)
                      +|++|+++++++++++.+.++++|+||||||+...   ..+.+.++|++++++|+.|++.++++++|.|++++.   ..|
T Consensus        81 ~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~---~~g  157 (272)
T 4dyv_A           81 TDVTDPDSVRALFTATVEKFGRVDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEP---RGG  157 (272)
T ss_dssp             CCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSS---CCE
T ss_pred             ecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCC---CCc
Confidence            99999999999999999999999999999998643   267789999999999999999999999999987531   137


Q ss_pred             eEEEEcCCccccccCCcccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCcc
Q 019722          170 RIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRER  249 (336)
Q Consensus       170 rIV~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~  249 (336)
                      +||++||..+..+                 .++...|++||+++++|+++++.|+++.|  |+||+|+||+|+|++.+..
T Consensus       158 ~IV~isS~~~~~~-----------------~~~~~~Y~asKaa~~~l~~~la~e~~~~g--I~vn~v~PG~v~T~~~~~~  218 (272)
T 4dyv_A          158 RIINNGSISATSP-----------------RPYSAPYTATKHAITGLTKSTSLDGRVHD--IACGQIDIGNADTPMAQKM  218 (272)
T ss_dssp             EEEEECCSSTTSC-----------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEEEECC-------
T ss_pred             EEEEECchhhcCC-----------------CCCchHHHHHHHHHHHHHHHHHHHhCccC--EEEEEEEECcccChhhhhh
Confidence            9999999988776                 66778999999999999999999999988  9999999999999998775


Q ss_pred             chhHHHHHHHHHHhhcCChHHHHHHHHHHHhcCccccCCceeeccCccc
Q 019722          250 EGFITDLVFFLTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEA  298 (336)
Q Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  298 (336)
                      ...........+..+...|+|+|.+++|+++.+....+++..+......
T Consensus       219 ~~~~~~~~~~~~~~~~~~pedvA~~v~fL~s~~~~~~~~~i~i~~~~~~  267 (272)
T 4dyv_A          219 KAGVPQADLSIKVEPVMDVAHVASAVVYMASLPLDANVQFMTIMATKMP  267 (272)
T ss_dssp             -----------------CHHHHHHHHHHHHHSCTTSCCCEEEEEEC---
T ss_pred             cccchhhhhcccccCCCCHHHHHHHHHHHhCCCCcCccceEEEeccCcc
Confidence            4333333333455567899999999999999887766666665544433

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=100.00  E-value=2.5e-41  Score=304.69  Aligned_cols=244  Identities=20%  Similarity=0.175  Sum_probs=204.6

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCC------------hHHHHHHHHHHHhhCCCCceEEEeccCCC
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARS------------LKAAEEAKARLASDCPGSDIVVLPLDLSS   97 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~------------~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~   97 (336)
                      ..+++||++|||||++|||++++++|+++|++|++++|+            .+.+++..+.+...  +.++.++++|++|
T Consensus         8 ~~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~   85 (278)
T 3sx2_A            8 EGPLTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDI--GSRIVARQADVRD   85 (278)
T ss_dssp             -CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHH--TCCEEEEECCTTC
T ss_pred             CCCCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhc--CCeEEEEeCCCCC
Confidence            457999999999999999999999999999999999987            67777777777665  5689999999999


Q ss_pred             HHHHHHHHHHHHhcCCCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCC
Q 019722           98 LSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSS  177 (336)
Q Consensus        98 ~~~v~~~~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~  177 (336)
                      +++++++++++.+.++++|+||||||+.....  +.++|++++++|+.+++.++++++|.|.+++.    .|+||++||.
T Consensus        86 ~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~--~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~----~g~iv~isS~  159 (278)
T 3sx2_A           86 RESLSAALQAGLDELGRLDIVVANAGIAPMSA--GDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGT----GGSIVLISSS  159 (278)
T ss_dssp             HHHHHHHHHHHHHHHCCCCEEEECCCCCCCSS--THHHHHHHHHHHTHHHHHHHHHHHHHHHHHCS----CEEEEEECCG
T ss_pred             HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCC--CHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCC----CcEEEEEccH
Confidence            99999999999999999999999999865433  57899999999999999999999999988632    4899999998


Q ss_pred             ccccccCCcccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHHH
Q 019722          178 IHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLV  257 (336)
Q Consensus       178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~  257 (336)
                      ++..+...             ..++...|++||++++.|+++++.|+++.|  |+||+|+||+|+|++......  ....
T Consensus       160 ~~~~~~~~-------------~~~~~~~Y~asKaa~~~~~~~la~e~~~~g--i~vn~v~PG~v~T~~~~~~~~--~~~~  222 (278)
T 3sx2_A          160 AGLAGVGS-------------ADPGSVGYVAAKHGVVGLMRVYANLLAGQM--IRVNSIHPSGVETPMINNEFT--REWL  222 (278)
T ss_dssp             GGTSCCCC-------------SSHHHHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEESCBSSTTTSSHHH--HHHH
T ss_pred             HhcCCCcc-------------CCCCchHhHHHHHHHHHHHHHHHHHHhccC--cEEEEEecCCccCccchhhhH--HHHH
Confidence            87765110             136788999999999999999999999988  999999999999999875321  1111


Q ss_pred             HHHHH-------------hhcCChHHHHHHHHHHHhcCccccCCceeeccCcccc
Q 019722          258 FFLTS-------------KLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAW  299 (336)
Q Consensus       258 ~~~~~-------------~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  299 (336)
                      .....             .+..+|+|+|.+++|+++ +.+.+++|+.+.++|+..
T Consensus       223 ~~~~~~~~~~~~~~~~~p~~~~~p~dvA~~v~~l~s-~~~~~itG~~i~vdGG~~  276 (278)
T 3sx2_A          223 AKMAAATDTPGAMGNAMPVEVLAPEDVANAVAWLVS-DQARYITGVTLPVDAGFL  276 (278)
T ss_dssp             HHHHHHCC--CTTSCSSSCSSBCHHHHHHHHHHHTS-GGGTTCCSCEEEESTTTT
T ss_pred             hhccchhhhhhhhhhhcCcCcCCHHHHHHHHHHHhC-cccccccCCEEeECCCcc
Confidence            11110             244579999999999987 777899999999998743

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=100.00  E-value=2.1e-42  Score=310.10  Aligned_cols=240  Identities=25%  Similarity=0.293  Sum_probs=197.4

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEe-eCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLP-ARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQF  108 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~-~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~  108 (336)
                      .+.++||++|||||++|||+++|++|+++|++|+++ .|+.+..++..++++..  +.++.++++|++++++++++++++
T Consensus        22 ~m~~~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~   99 (267)
T 3u5t_A           22 SMMETNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAA--GGKALTAQADVSDPAAVRRLFATA   99 (267)
T ss_dssp             -----CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             ccccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc--CCeEEEEEcCCCCHHHHHHHHHHH
Confidence            456789999999999999999999999999999988 56667777777777665  568999999999999999999999


Q ss_pred             HhcCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCc
Q 019722          109 HSLNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDM  186 (336)
Q Consensus       109 ~~~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~  186 (336)
                      .+.++++|+||||||+....  .+.+.++|++++++|+.|++.++++++|.|++       .|+||++||..+..+    
T Consensus       100 ~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~-------~g~iv~isS~~~~~~----  168 (267)
T 3u5t_A          100 EEAFGGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRV-------GGRIINMSTSQVGLL----  168 (267)
T ss_dssp             HHHHSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEE-------EEEEEEECCTHHHHC----
T ss_pred             HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh-------CCeEEEEeChhhccC----
Confidence            99999999999999986543  56788999999999999999999999999954       379999999887765    


Q ss_pred             ccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccc--hhHHHHHHHHHHhh
Q 019722          187 IRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRERE--GFITDLVFFLTSKL  264 (336)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~--~~~~~~~~~~~~~~  264 (336)
                                   .+....|++||++++.|+++++.|+++.|  |+||+|+||+|+|++.....  ..........+..+
T Consensus       169 -------------~~~~~~Y~asKaa~~~l~~~la~e~~~~g--I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~p~~r  233 (267)
T 3u5t_A          169 -------------HPSYGIYAAAKAGVEAMTHVLSKELRGRD--ITVNAVAPGPTATDLFLEGKSDEVRDRFAKLAPLER  233 (267)
T ss_dssp             -------------CTTCHHHHHHHHHHHHHHHHHHHHTTTSC--CEEEEEEECCBC-----------CHHHHHTSSTTCS
T ss_pred             -------------CCCchHHHHHHHHHHHHHHHHHHHhhhhC--CEEEEEEECCCcCccccccCCHHHHHHHHhcCCCCC
Confidence                         66778999999999999999999999888  99999999999999976531  12222222334456


Q ss_pred             cCChHHHHHHHHHHHhcCccccCCceeeccCccc
Q 019722          265 LKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEA  298 (336)
Q Consensus       265 ~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  298 (336)
                      ..+|+|+|.+++|+++ +.+.+++|+.+.++|+.
T Consensus       234 ~~~pedvA~~v~~L~s-~~~~~itG~~i~vdGG~  266 (267)
T 3u5t_A          234 LGTPQDIAGAVAFLAG-PDGAWVNGQVLRANGGI  266 (267)
T ss_dssp             CBCHHHHHHHHHHHHS-TTTTTCCSEEEEESSSC
T ss_pred             CcCHHHHHHHHHHHhC-ccccCccCCEEEeCCCc
Confidence            6789999999999997 77889999999999863

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=100.00  E-value=3.9e-41  Score=302.72  Aligned_cols=244  Identities=22%  Similarity=0.248  Sum_probs=204.3

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      .++++||++|||||++|||++++++|+++|++|++++|+.+++++..++++..  +.++.++++|++++++++++++++.
T Consensus        16 ~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~   93 (273)
T 1ae1_A           16 RWSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREK--GLNVEGSVCDLLSRTERDKLMQTVA   93 (273)
T ss_dssp             CCCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             cCCCCCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEECCCCCHHHHHHHHHHHH
Confidence            46789999999999999999999999999999999999999888888887664  5679999999999999999999999


Q ss_pred             hcC-CCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCc
Q 019722          110 SLN-LPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDM  186 (336)
Q Consensus       110 ~~~-~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~  186 (336)
                      +.+ +++|+||||||+....  .+.+.++|++++++|+.+++.++++++|.|++++     .|+||++||.++..+    
T Consensus        94 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-----~g~iv~isS~~~~~~----  164 (273)
T 1ae1_A           94 HVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQ-----NGNVIFLSSIAGFSA----  164 (273)
T ss_dssp             HHTTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-----SEEEEEECCGGGTSC----
T ss_pred             HHcCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-----CcEEEEEcCHhhcCC----
Confidence            988 8999999999976432  5678899999999999999999999999998765     489999999887665    


Q ss_pred             ccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccch-------hHHHHHHH
Q 019722          187 IRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREG-------FITDLVFF  259 (336)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~-------~~~~~~~~  259 (336)
                                   .++...|++||++++.|+++++.|+++.|  |+||+|+||+++|++.+....       ........
T Consensus       165 -------------~~~~~~Y~asK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~  229 (273)
T 1ae1_A          165 -------------LPSVSLYSASKGAINQMTKSLACEWAKDN--IRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVK  229 (273)
T ss_dssp             -------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBC-------------CHHHHHHHHHH
T ss_pred             -------------CCCcchhHHHHHHHHHHHHHHHHHHhhcC--cEEEEEEeCCCcCchhhhhhhcccCcHHHHHHHHhc
Confidence                         56678999999999999999999999888  999999999999998764321       11112222


Q ss_pred             HHHhhcCChHHHHHHHHHHHhcCccccCCceeeccCccccc
Q 019722          260 LTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWT  300 (336)
Q Consensus       260 ~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~  300 (336)
                      .+..+...|+|+|..++|+++ +.+.+++|+.+.++|+...
T Consensus       230 ~p~~r~~~p~dvA~~v~~l~s-~~~~~~tG~~i~vdGG~~~  269 (273)
T 1ae1_A          230 TPMGRAGKPQEVSALIAFLCF-PAASYITGQIIWADGGFTA  269 (273)
T ss_dssp             STTCSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTGGG
T ss_pred             CCCCCCcCHHHHHHHHHHHhC-ccccCcCCCEEEECCCccc
Confidence            233456789999999999987 7778999999999988543

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=100.00  E-value=7.7e-42  Score=310.86  Aligned_cols=249  Identities=15%  Similarity=0.086  Sum_probs=208.4

Q ss_pred             ccccccCCCCCCCCCEEEEeCCCC--hHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHH
Q 019722           22 TAEQVTDGCPNLSSVTAIITGATS--GIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLS   99 (336)
Q Consensus        22 ~~~~~~~~~~~l~gk~~lItGgs~--gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~   99 (336)
                      .+.+|.. +++|+||++|||||+|  |||++++++|+++|++|++++|+.+..+...+..+..   .++.+++||++|++
T Consensus        18 gp~sm~~-~~~l~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~Dv~d~~   93 (296)
T 3k31_A           18 GPGSMRT-GMLMEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESL---GVKLTVPCDVSDAE   93 (296)
T ss_dssp             ---CCCC-CCTTTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHH---TCCEEEECCTTCHH
T ss_pred             CCccccc-hhccCCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhc---CCeEEEEcCCCCHH
Confidence            3445555 7789999999999997  9999999999999999999999976544433333332   34789999999999


Q ss_pred             HHHHHHHHHHhcCCCccEEEEcccCCC------CCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEE
Q 019722          100 SVRNFVSQFHSLNLPLNLLINNAGKFA------HQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVN  173 (336)
Q Consensus       100 ~v~~~~~~~~~~~~~id~lv~nAg~~~------~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~  173 (336)
                      +++++++++.+.++++|+||||||+..      ...+.+.++|++.+++|+.+++.++++++|.|++       .|+||+
T Consensus        94 ~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~-------~g~IV~  166 (296)
T 3k31_A           94 SVDNMFKVLAEEWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTN-------GGSILT  166 (296)
T ss_dssp             HHHHHHHHHHHHHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTT-------CEEEEE
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhc-------CCEEEE
Confidence            999999999999999999999999874      2357788999999999999999999999999865       379999


Q ss_pred             EcCCccccccCCcccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchh-
Q 019722          174 VSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGF-  252 (336)
Q Consensus       174 vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~-  252 (336)
                      +||..+..+                 .+.+..|++||++++.|+++++.|+++.|  |+||+|+||+|+|++.+..... 
T Consensus       167 isS~~~~~~-----------------~~~~~~Y~asKaal~~l~~~la~e~~~~g--Irvn~v~PG~v~T~~~~~~~~~~  227 (296)
T 3k31_A          167 LSYYGAEKV-----------------VPHYNVMGVCKAALEASVKYLAVDLGKQQ--IRVNAISAGPVRTLASSGISDFH  227 (296)
T ss_dssp             EECGGGTSC-----------------CTTTTHHHHHHHHHHHHHHHHHHHHHTTT--EEEEEEEECCCCCSSCCSCHHHH
T ss_pred             EEehhhccC-----------------CCCchhhHHHHHHHHHHHHHHHHHHhhcC--cEEEEEEECCCcCchhhcccchH
Confidence            999888765                 66778999999999999999999999988  9999999999999998775322 


Q ss_pred             --HHHHHHHHHHhhcCChHHHHHHHHHHHhcCccccCCceeeccCcccccc
Q 019722          253 --ITDLVFFLTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWTS  301 (336)
Q Consensus       253 --~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~~  301 (336)
                        ........+..+..+|+|+|.+++|+++ +.+.++||+.+.++|+....
T Consensus       228 ~~~~~~~~~~p~~r~~~pedvA~~v~fL~s-~~a~~itG~~i~vdGG~~~~  277 (296)
T 3k31_A          228 YILTWNKYNSPLRRNTTLDDVGGAALYLLS-DLGRGTTGETVHVDCGYHVV  277 (296)
T ss_dssp             HHHHHHHHHSTTSSCCCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTGGGC
T ss_pred             HHHHHHHhcCCCCCCCCHHHHHHHHHHHcC-CccCCccCCEEEECCCcccc
Confidence              2222233445567899999999999997 77889999999999986554

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=100.00  E-value=1.2e-41  Score=305.20  Aligned_cols=241  Identities=22%  Similarity=0.276  Sum_probs=206.7

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHh
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHS  110 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  110 (336)
                      ++++||++|||||++|||++++++|+++|++|++++|+.+.+++..+++...+++..+.++.+|++++++++++++    
T Consensus         6 ~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~----   81 (267)
T 3t4x_A            6 MQLKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIE----   81 (267)
T ss_dssp             CCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHH----
T ss_pred             cccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHH----
Confidence            5789999999999999999999999999999999999999999999999888777789999999999999887765    


Q ss_pred             cCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccc
Q 019722          111 LNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIR  188 (336)
Q Consensus       111 ~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~  188 (336)
                      .++++|+||||||+....  .+.+.++|++++++|+.+++.++|+++|.|++++     .|+||++||..+..+      
T Consensus        82 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-----~g~iv~isS~~~~~~------  150 (267)
T 3t4x_A           82 KYPKVDILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERK-----EGRVIFIASEAAIMP------  150 (267)
T ss_dssp             HCCCCSEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-----EEEEEEECCGGGTSC------
T ss_pred             hcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-----CCEEEEEcchhhccC------
Confidence            478999999999986543  5678899999999999999999999999998865     489999999988766      


Q ss_pred             ccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccch--------hHHHHHHHH
Q 019722          189 YLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREG--------FITDLVFFL  260 (336)
Q Consensus       189 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~--------~~~~~~~~~  260 (336)
                                 .+....|++||++++.|+++++.|+++.|  |+||+|+||+++|++.+....        ...+.....
T Consensus       151 -----------~~~~~~Y~asKaa~~~l~~~la~e~~~~g--i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~  217 (267)
T 3t4x_A          151 -----------SQEMAHYSATKTMQLSLSRSLAELTTGTN--VTVNTIMPGSTLTEGVETMLNSLYPNEQLTIEEAEKRF  217 (267)
T ss_dssp             -----------CTTCHHHHHHHHHHHHHHHHHHHHTTTSE--EEEEEEEECCBCCHHHHHHHHHSSTTSCCCHHHHHHHH
T ss_pred             -----------CCcchHHHHHHHHHHHHHHHHHHHhCCCC--eEEEEEeCCeecCccHHHHHhhcCcccCCCHHHHHHHH
Confidence                       66788999999999999999999999887  999999999999997543210        011111111


Q ss_pred             --------HHhhcCChHHHHHHHHHHHhcCccccCCceeeccCccccc
Q 019722          261 --------TSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWT  300 (336)
Q Consensus       261 --------~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~  300 (336)
                              +..+...|+|+|.+++|+++ +.+.++||+.+.++|+...
T Consensus       218 ~~~~~~~~~~~r~~~pedvA~~v~fL~s-~~~~~itG~~i~vdGG~~~  264 (267)
T 3t4x_A          218 MKENRPTSIIQRLIRPEEIAHLVTFLSS-PLSSAINGSALRIDGGLVR  264 (267)
T ss_dssp             HHHHCTTCSSCSCBCTHHHHHHHHHHHS-GGGTTCCSCEEEESTTCSC
T ss_pred             hhccCCcccccCccCHHHHHHHHHHHcC-ccccCccCCeEEECCCccc
Confidence                    12456789999999999987 7789999999999998543

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=100.00  E-value=7.5e-42  Score=303.89  Aligned_cols=237  Identities=23%  Similarity=0.249  Sum_probs=205.0

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccC--CCHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDL--SSLSSVRNFVSQ  107 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl--~~~~~v~~~~~~  107 (336)
                      ...|+||++|||||++|||++++++|+++|++|++++|+.+++++..+++.... +.++.++.+|+  ++++++++++++
T Consensus         7 ~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~   85 (252)
T 3f1l_A            7 QDLLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEET-GRQPQWFILDLLTCTSENCQQLAQR   85 (252)
T ss_dssp             TTTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH-SCCCEEEECCTTTCCHHHHHHHHHH
T ss_pred             ccccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhc-CCCceEEEEecccCCHHHHHHHHHH
Confidence            456899999999999999999999999999999999999999998888887653 34789999999  999999999999


Q ss_pred             HHhcCCCccEEEEcccCCCC---CCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccC
Q 019722          108 FHSLNLPLNLLINNAGKFAH---QHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSG  184 (336)
Q Consensus       108 ~~~~~~~id~lv~nAg~~~~---~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~  184 (336)
                      +.+.++++|+||||||+...   ..+.+.++|++++++|+.+++.++|+++|.|++++     .|+||++||..+..+  
T Consensus        86 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-----~g~iv~isS~~~~~~--  158 (252)
T 3f1l_A           86 IAVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSD-----AGSLVFTSSSVGRQG--  158 (252)
T ss_dssp             HHHHCSCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSS-----SCEEEEECCGGGTSC--
T ss_pred             HHHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCC-----CCEEEEECChhhccC--
Confidence            99999999999999997532   36778899999999999999999999999998765     589999999988766  


Q ss_pred             CcccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHHHHHHHHhh
Q 019722          185 DMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSKL  264 (336)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~  264 (336)
                                     .++...|++||++++.|+++++.|+++.   ||||+|+||+|+|++......       ......
T Consensus       159 ---------------~~~~~~Y~asK~a~~~l~~~la~e~~~~---irvn~v~PG~v~t~~~~~~~~-------~~~~~~  213 (252)
T 3f1l_A          159 ---------------RANWGAYAASKFATEGMMQVLADEYQQR---LRVNCINPGGTRTAMRASAFP-------TEDPQK  213 (252)
T ss_dssp             ---------------CTTCHHHHHHHHHHHHHHHHHHHHTTTT---CEEEEEECCSBSSHHHHHHCT-------TCCGGG
T ss_pred             ---------------CCCCchhHHHHHHHHHHHHHHHHHhcCC---cEEEEEecCcccCchhhhhCC-------ccchhc
Confidence                           6677899999999999999999999753   999999999999998543211       111234


Q ss_pred             cCChHHHHHHHHHHHhcCccccCCceeeccCccccc
Q 019722          265 LKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWT  300 (336)
Q Consensus       265 ~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~  300 (336)
                      ...|+|++..++|+++ +.+.++||+.+.++|+...
T Consensus       214 ~~~p~dva~~~~~L~s-~~~~~itG~~i~vdgG~~~  248 (252)
T 3f1l_A          214 LKTPADIMPLYLWLMG-DDSRRKTGMTFDAQPGRKP  248 (252)
T ss_dssp             SBCTGGGHHHHHHHHS-GGGTTCCSCEEESSCC---
T ss_pred             cCCHHHHHHHHHHHcC-ccccCCCCCEEEeCCCcCC
Confidence            6789999999999997 7778999999999998644

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=100.00  E-value=1.1e-41  Score=305.31  Aligned_cols=245  Identities=22%  Similarity=0.246  Sum_probs=208.5

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      .++++||++|||||++|||++++++|+++|++|++++|+.+++++..+++....++.++.++++|++++++++++++++.
T Consensus         8 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   87 (267)
T 1iy8_A            8 TTRFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATT   87 (267)
T ss_dssp             --CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHH
Confidence            45689999999999999999999999999999999999999888888888766556689999999999999999999999


Q ss_pred             hcCCCccEEEEcccCCCC---CCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCc
Q 019722          110 SLNLPLNLLINNAGKFAH---QHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDM  186 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~~---~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~  186 (336)
                      +.++++|+||||||+...   ..+.+.++|++++++|+.+++.++++++|.|++++     .++||++||..+..+    
T Consensus        88 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-----~g~iv~isS~~~~~~----  158 (267)
T 1iy8_A           88 ERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQG-----SGMVVNTASVGGIRG----  158 (267)
T ss_dssp             HHHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-----CCEEEEECCGGGTSB----
T ss_pred             HHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-----CCEEEEEcchhhccC----
Confidence            999999999999997644   25678899999999999999999999999998765     589999999887765    


Q ss_pred             ccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCcc-----chhHH----HHH
Q 019722          187 IRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRER-----EGFIT----DLV  257 (336)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~-----~~~~~----~~~  257 (336)
                                   .++...|++||++++.|+++++.|+++.|  |+||+|+||+++|++.+..     .....    ...
T Consensus       159 -------------~~~~~~Y~asK~a~~~~~~~la~e~~~~g--i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~  223 (267)
T 1iy8_A          159 -------------IGNQSGYAAAKHGVVGLTRNSAVEYGRYG--IRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFI  223 (267)
T ss_dssp             -------------CSSBHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred             -------------CCCCccHHHHHHHHHHHHHHHHHHHHhcC--eEEEEEEeCCCcCcchhccccccChhhhhhHHHHHh
Confidence                         56678999999999999999999999888  9999999999999986542     11111    111


Q ss_pred             HHHHHhhcCChHHHHHHHHHHHhcCccccCCceeeccCcccc
Q 019722          258 FFLTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAW  299 (336)
Q Consensus       258 ~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  299 (336)
                      ...+..+..+|+|+|..++|+++ +.+.+++|+.+..+|+..
T Consensus       224 ~~~p~~r~~~~~dvA~~v~~l~s-~~~~~~tG~~i~vdGG~~  264 (267)
T 1iy8_A          224 QVNPSKRYGEAPEIAAVVAFLLS-DDASYVNATVVPIDGGQS  264 (267)
T ss_dssp             TTCTTCSCBCHHHHHHHHHHHTS-GGGTTCCSCEEEESTTTT
T ss_pred             ccCCCCCCcCHHHHHHHHHHHcC-ccccCCCCCEEEECCCcc
Confidence            11223456789999999999986 667899999999998743

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=100.00  E-value=1.5e-41  Score=306.66  Aligned_cols=240  Identities=20%  Similarity=0.215  Sum_probs=203.2

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHh
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHS  110 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  110 (336)
                      |+|+||++|||||++|||++++++|+++|++|++++|+.+++++..+++     +.++.++++|++++++++++++++.+
T Consensus         1 M~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~   75 (281)
T 3zv4_A            1 MKLTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAH-----GGNAVGVVGDVRSLQDQKRAAERCLA   75 (281)
T ss_dssp             CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT-----BTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCcCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHc-----CCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence            5789999999999999999999999999999999999988877665543     46899999999999999999999999


Q ss_pred             cCCCccEEEEcccCCCCC-------CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCcccccc
Q 019722          111 LNLPLNLLINNAGKFAHQ-------HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFS  183 (336)
Q Consensus       111 ~~~~id~lv~nAg~~~~~-------~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~  183 (336)
                      .++++|+||||||+....       .+.+.++|++++++|+.+++.++|+++|.|.+++      |+||++||..+..+ 
T Consensus        76 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~------g~iv~isS~~~~~~-  148 (281)
T 3zv4_A           76 AFGKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSSR------GSVVFTISNAGFYP-  148 (281)
T ss_dssp             HHSCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT------CEEEEECCGGGTSS-
T ss_pred             hcCCCCEEEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC------CeEEEEecchhccC-
Confidence            999999999999976432       2334567999999999999999999999998763      89999999988766 


Q ss_pred             CCcccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccc-----------hh
Q 019722          184 GDMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRERE-----------GF  252 (336)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~-----------~~  252 (336)
                                      .+....|++||+++++|+++++.|+++.   ||||+|+||+|+|+|.....           ..
T Consensus       149 ----------------~~~~~~Y~asKaa~~~l~~~la~e~~~~---Irvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~  209 (281)
T 3zv4_A          149 ----------------NGGGPLYTATKHAVVGLVRQMAFELAPH---VRVNGVAPGGMNTDLRGPSSLGLSEQSISSVPL  209 (281)
T ss_dssp             ----------------SSSCHHHHHHHHHHHHHHHHHHHHHTTT---SEEEEEEECSSCC--CCCTTCC--------CCH
T ss_pred             ----------------CCCCchhHHHHHHHHHHHHHHHHHhcCC---CEEEEEECCcCcCCcccccccccccccccchhH
Confidence                            6677889999999999999999999863   99999999999999875421           11


Q ss_pred             HHHHHHHHHHhhcCChHHHHHHHHHHHhcCccccCCceeeccCcccccc
Q 019722          253 ITDLVFFLTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWTS  301 (336)
Q Consensus       253 ~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~~  301 (336)
                      ........+..+..+|+|+|.+++|+++++.+.++||+.+.++|+....
T Consensus       210 ~~~~~~~~p~~r~~~pedvA~~v~fL~s~~~~~~itG~~i~vdGG~~~~  258 (281)
T 3zv4_A          210 ADMLKSVLPIGRMPALEEYTGAYVFFATRGDSLPATGALLNYDGGMGVR  258 (281)
T ss_dssp             HHHHHHTCTTSSCCCGGGGSHHHHHHHSTTTSTTCSSCEEEESSSGGGC
T ss_pred             HHHHHhcCCCCCCCCHHHHHHHHHHhhcccccccccCcEEEECCCCccc
Confidence            1222333455677899999999999998788899999999999986554

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=100.00  E-value=1.3e-41  Score=304.90  Aligned_cols=250  Identities=20%  Similarity=0.257  Sum_probs=205.3

Q ss_pred             cccccCCCCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHH
Q 019722           23 AEQVTDGCPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVR  102 (336)
Q Consensus        23 ~~~~~~~~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~  102 (336)
                      ++.++..-.+++||++|||||++|||++++++|+++|++|++++|+.+++++..+++.... +.++.++++|++++++++
T Consensus         9 ~~~~~~~~~~l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~v~   87 (267)
T 1vl8_A            9 HHHHMKEVFDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKY-GVETMAFRCDVSNYEEVK   87 (267)
T ss_dssp             --------CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH-CCCEEEEECCTTCHHHHH
T ss_pred             CCCCCCCCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhc-CCeEEEEEcCCCCHHHHH
Confidence            3444443667999999999999999999999999999999999999988888777773322 457899999999999999


Q ss_pred             HHHHHHHhcCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCc-c
Q 019722          103 NFVSQFHSLNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSI-H  179 (336)
Q Consensus       103 ~~~~~~~~~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~-~  179 (336)
                      ++++++.+.++++|+||||||+....  .+.+.++|++++++|+.+++.++++++|.|++++     .++||++||.. +
T Consensus        88 ~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~-----~g~iv~isS~~~~  162 (267)
T 1vl8_A           88 KLLEAVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESD-----NPSIINIGSLTVE  162 (267)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCS-----SCEEEEECCGGGT
T ss_pred             HHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-----CcEEEEECCcchh
Confidence            99999999999999999999976543  5678899999999999999999999999997754     48999999987 6


Q ss_pred             ccccCCcccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccc---hhHHHH
Q 019722          180 SWFSGDMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRERE---GFITDL  256 (336)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~---~~~~~~  256 (336)
                      ..+                 .+....|++||++++.|+++++.|+++.|  |+||+|+||+++|++.+...   ......
T Consensus       163 ~~~-----------------~~~~~~Y~asK~a~~~~~~~la~e~~~~g--i~v~~v~PG~v~T~~~~~~~~~~~~~~~~  223 (267)
T 1vl8_A          163 EVT-----------------MPNISAYAASKGGVASLTKALAKEWGRYG--IRVNVIAPGWYRTKMTEAVFSDPEKLDYM  223 (267)
T ss_dssp             CCC-----------------SSSCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECCBCSTTTHHHHTCHHHHHHH
T ss_pred             ccC-----------------CCCChhHHHHHHHHHHHHHHHHHHhcccC--eEEEEEEeccCccccccccccChHHHHHH
Confidence            554                 55677899999999999999999999988  99999999999999876422   111111


Q ss_pred             HHHHHHhhcCChHHHHHHHHHHHhcCccccCCceeeccCccc
Q 019722          257 VFFLTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEA  298 (336)
Q Consensus       257 ~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  298 (336)
                      ....+..+..+|+|+|..++|+++ +...+++|+.+.++|+.
T Consensus       224 ~~~~p~~~~~~p~dvA~~v~~l~s-~~~~~itG~~i~vdGG~  264 (267)
T 1vl8_A          224 LKRIPLGRTGVPEDLKGVAVFLAS-EEAKYVTGQIIFVDGGW  264 (267)
T ss_dssp             HHTCTTSSCBCGGGGHHHHHHHHS-GGGTTCCSCEEEESTTG
T ss_pred             HhhCCCCCCcCHHHHHHHHHHHcC-ccccCCcCCeEEECCCC
Confidence            112233456789999999999987 66789999999998874

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=100.00  E-value=2.5e-41  Score=300.58  Aligned_cols=235  Identities=18%  Similarity=0.161  Sum_probs=188.3

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHh
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHS  110 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  110 (336)
                      ++++||++|||||++|||++++++|+++|++|++++|+.+++++..++++..  +.++.++++|++|+++++++++++.+
T Consensus         3 ~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~   80 (252)
T 3h7a_A            3 LTPRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAA--GGRIVARSLDARNEDEVTAFLNAADA   80 (252)
T ss_dssp             --CCSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHT--TCEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEECcCCCHHHHHHHHHHHHh
Confidence            4689999999999999999999999999999999999999999998888776  56899999999999999999999998


Q ss_pred             cCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccc
Q 019722          111 LNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIR  188 (336)
Q Consensus       111 ~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~  188 (336)
                      . +++|+||||||+....  .+.+.++|++++++|+.|++.++++++|.|++++     .|+||++||.++..+      
T Consensus        81 ~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-----~g~iv~isS~~~~~~------  148 (252)
T 3h7a_A           81 H-APLEVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHG-----QGKIFFTGATASLRG------  148 (252)
T ss_dssp             H-SCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-----CEEEEEEEEGGGTCC------
T ss_pred             h-CCceEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-----CcEEEEECCHHHcCC------
Confidence            8 9999999999986543  5678899999999999999999999999999875     589999999988776      


Q ss_pred             ccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEE-EEeeCCceeCCCCCccchhH-HHHHHHHHHhhcC
Q 019722          189 YLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTV-NCVHPGIVRTRLTREREGFI-TDLVFFLTSKLLK  266 (336)
Q Consensus       189 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~v-n~v~PG~v~T~~~~~~~~~~-~~~~~~~~~~~~~  266 (336)
                                 .++...|++||+++++|+++++.|+++.|  |+| |+|+||+|+|++.+...... .......+.. ..
T Consensus       149 -----------~~~~~~Y~asKaa~~~l~~~la~e~~~~g--i~v~n~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~-~~  214 (252)
T 3h7a_A          149 -----------GSGFAAFASAKFGLRAVAQSMARELMPKN--IHVAHLIIDSGVDTAWVRERREQMFGKDALANPDL-LM  214 (252)
T ss_dssp             -----------CTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEEC----------------------------C
T ss_pred             -----------CCCCccHHHHHHHHHHHHHHHHHHhhhcC--CEEEEEecCCccCChhhhccchhhhhhhhhcCCcc-CC
Confidence                       67788999999999999999999999988  999 99999999999987753222 1122222333 78


Q ss_pred             ChHHHHHHHHHHHhcCccccCCceeecc
Q 019722          267 TIPQGAATTCYVAIHPRLVNVSGKYFAD  294 (336)
Q Consensus       267 ~~~~~a~~~~~l~~~~~~~~~~G~~~~~  294 (336)
                      +|+|+|.+++|+++.+. ...+|+....
T Consensus       215 ~pedvA~~~~~l~s~~~-~~~~~~i~~~  241 (252)
T 3h7a_A          215 PPAAVAGAYWQLYQQPK-SAWTFEMEIR  241 (252)
T ss_dssp             CHHHHHHHHHHHHHCCG-GGBCSEEEEB
T ss_pred             CHHHHHHHHHHHHhCch-hcceeeEEee
Confidence            99999999999998555 4556665533

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=100.00  E-value=2.2e-41  Score=307.45  Aligned_cols=249  Identities=16%  Similarity=0.103  Sum_probs=201.6

Q ss_pred             ccccCCCCCCCCCEEEEeCCC--ChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHH
Q 019722           24 EQVTDGCPNLSSVTAIITGAT--SGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSV  101 (336)
Q Consensus        24 ~~~~~~~~~l~gk~~lItGgs--~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v  101 (336)
                      .+|+..+.+++||++|||||+  +|||+++|++|+++|++|++++|+.+.. +..+++.+..  .++.++++|++|++++
T Consensus        20 ~~~~~~~~~l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~-~~~~~~~~~~--~~~~~~~~Dv~d~~~v   96 (293)
T 3grk_A           20 GSMTAQSGLLQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALK-KRVEPLAEEL--GAFVAGHCDVADAASI   96 (293)
T ss_dssp             -------CTTTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHH-HHHHHHHHHH--TCEEEEECCTTCHHHH
T ss_pred             CCCCcccccCCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHH-HHHHHHHHhc--CCceEEECCCCCHHHH
Confidence            345554667999999999999  5599999999999999999999996543 3344444442  3689999999999999


Q ss_pred             HHHHHHHHhcCCCccEEEEcccCCC------CCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEc
Q 019722          102 RNFVSQFHSLNLPLNLLINNAGKFA------HQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVS  175 (336)
Q Consensus       102 ~~~~~~~~~~~~~id~lv~nAg~~~------~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vs  175 (336)
                      +++++++.+.++++|+||||||+..      ...+.+.++|++.+++|+.+++.++++++|.|++       .|+||++|
T Consensus        97 ~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~-------~g~Iv~is  169 (293)
T 3grk_A           97 DAVFETLEKKWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMAD-------GGSILTLT  169 (293)
T ss_dssp             HHHHHHHHHHTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTT-------CEEEEEEE
T ss_pred             HHHHHHHHHhcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccC-------CCEEEEEe
Confidence            9999999999999999999999864      2257788999999999999999999999999965       47999999


Q ss_pred             CCccccccCCcccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccch---h
Q 019722          176 SSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREG---F  252 (336)
Q Consensus       176 S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~---~  252 (336)
                      |..+..+                 .+.+..|++||++++.|+++++.|+++.|  |+||+|+||+|+|++.+....   .
T Consensus       170 S~~~~~~-----------------~~~~~~Y~asKaa~~~l~~~la~e~~~~g--I~vn~v~PG~v~T~~~~~~~~~~~~  230 (293)
T 3grk_A          170 YYGAEKV-----------------MPNYNVMGVAKAALEASVKYLAVDLGPQN--IRVNAISAGPIKTLAASGIGDFRYI  230 (293)
T ss_dssp             CGGGTSB-----------------CTTTTHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCCCC------CCHHHH
T ss_pred             ehhhccC-----------------CCchHHHHHHHHHHHHHHHHHHHHHhHhC--CEEEEEecCCCcchhhhcccchHHH
Confidence            9988766                 66788999999999999999999999988  999999999999999776532   2


Q ss_pred             HHHHHHHHHHhhcCChHHHHHHHHHHHhcCccccCCceeeccCccccccc
Q 019722          253 ITDLVFFLTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWTSK  302 (336)
Q Consensus       253 ~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~~~  302 (336)
                      ........+..+..+|+|+|.+++|+++ +.+.++||+.+.++|+.....
T Consensus       231 ~~~~~~~~p~~r~~~pedvA~~v~~L~s-~~~~~itG~~i~vdGG~~~~~  279 (293)
T 3grk_A          231 LKWNEYNAPLRRTVTIDEVGDVGLYFLS-DLSRSVTGEVHHADSGYHVIG  279 (293)
T ss_dssp             HHHHHHHSTTSSCCCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTGGGBC
T ss_pred             HHHHHhcCCCCCCCCHHHHHHHHHHHcC-ccccCCcceEEEECCCcccCC
Confidence            2223334455667899999999999997 777899999999999866543

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=100.00  E-value=5.4e-42  Score=306.17  Aligned_cols=255  Identities=18%  Similarity=0.194  Sum_probs=190.6

Q ss_pred             hhcCCCCCCCCCccccccCCCCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceE
Q 019722           10 GSAGASGYGSKSTAEQVTDGCPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIV   89 (336)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~   89 (336)
                      ++.++..-.+.-...+..-++++++||++|||||++|||++++++|+++|++|++++|+.++..+..++.       .+.
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-------~~~   74 (260)
T 3gem_A            2 GSSHHHHHHSSGRENLYFQGHMTLSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELRQA-------GAV   74 (260)
T ss_dssp             -------------------------CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHHHHHH-------TCE
T ss_pred             CCCcCCccccccccCcccccCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhc-------CCe
Confidence            3444444444445555555688999999999999999999999999999999999999987664433322       378


Q ss_pred             EEeccCCCHHHHHHHHHHHHhcCCCccEEEEcccCCCCC-CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCC
Q 019722           90 VLPLDLSSLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQ-HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQ  168 (336)
Q Consensus        90 ~~~~Dl~~~~~v~~~~~~~~~~~~~id~lv~nAg~~~~~-~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~  168 (336)
                      ++++|++++++++++++++.+.++++|+||||||+.... .+.+.++|++++++|+.+++.++++++|.|++++     .
T Consensus        75 ~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~-----~  149 (260)
T 3gem_A           75 ALYGDFSCETGIMAFIDLLKTQTSSLRAVVHNASEWLAETPGEEADNFTRMFSVHMLAPYLINLHCEPLLTASE-----V  149 (260)
T ss_dssp             EEECCTTSHHHHHHHHHHHHHHCSCCSEEEECCCCCCCCCTTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSS-----S
T ss_pred             EEECCCCCHHHHHHHHHHHHHhcCCCCEEEECCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-----C
Confidence            899999999999999999999999999999999976543 4567789999999999999999999999998765     5


Q ss_pred             CeEEEEcCCccccccCCcccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCc
Q 019722          169 GRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRE  248 (336)
Q Consensus       169 grIV~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~  248 (336)
                      |+||++||..+..+                 .++...|++||++++.|+++++.|+++ +  |+||+|+||++.|++...
T Consensus       150 g~iv~isS~~~~~~-----------------~~~~~~Y~asKaa~~~l~~~la~e~~~-~--Irvn~v~PG~v~t~~~~~  209 (260)
T 3gem_A          150 ADIVHISDDVTRKG-----------------SSKHIAYCATKAGLESLTLSFAARFAP-L--VKVNGIAPALLMFQPKDD  209 (260)
T ss_dssp             CEEEEECCGGGGTC-----------------CSSCHHHHHHHHHHHHHHHHHHHHHTT-T--CEEEEEEECTTCC-----
T ss_pred             cEEEEECChhhcCC-----------------CCCcHhHHHHHHHHHHHHHHHHHHHCC-C--CEEEEEeecccccCCCCC
Confidence            89999999988766                 667789999999999999999999987 5  999999999999997553


Q ss_pred             cchhHHHHHHHHHHhhcCChHHHHHHHHHHHhcCccccCCceeeccCccccc
Q 019722          249 REGFITDLVFFLTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWT  300 (336)
Q Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~  300 (336)
                       ...........+..+..+|+|+|.+++|++.   ..+++|+.+.++|+...
T Consensus       210 -~~~~~~~~~~~p~~r~~~~edva~~v~~L~~---~~~itG~~i~vdGG~~~  257 (260)
T 3gem_A          210 -AAYRANALAKSALGIEPGAEVIYQSLRYLLD---STYVTGTTLTVNGGRHV  257 (260)
T ss_dssp             -----------CCSCCCCCTHHHHHHHHHHHH---CSSCCSCEEEESTTTTT
T ss_pred             -HHHHHHHHhcCCCCCCCCHHHHHHHHHHHhh---CCCCCCCEEEECCCccc
Confidence             2222223333445566789999999999983   57899999999998654

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=100.00  E-value=1.6e-42  Score=312.13  Aligned_cols=259  Identities=15%  Similarity=0.133  Sum_probs=216.5

Q ss_pred             CCCCCCEEEEeCCC--ChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHH
Q 019722           31 PNLSSVTAIITGAT--SGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQF  108 (336)
Q Consensus        31 ~~l~gk~~lItGgs--~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~  108 (336)
                      .+++||++|||||+  +|||++++++|+++|++|++++|+.+ .++..+++....+  ++.++++|++++++++++++++
T Consensus         2 ~~l~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~--~~~~~~~D~~~~~~v~~~~~~~   78 (275)
T 2pd4_A            2 GFLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-LEKRVRPIAQELN--SPYVYELDVSKEEHFKSLYNSV   78 (275)
T ss_dssp             CTTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT-THHHHHHHHHHTT--CCCEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHHHHhcC--CcEEEEcCCCCHHHHHHHHHHH
Confidence            35889999999999  99999999999999999999999986 5555566655432  4788999999999999999999


Q ss_pred             HhcCCCccEEEEcccCCCC------CCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccc
Q 019722          109 HSLNLPLNLLINNAGKFAH------QHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWF  182 (336)
Q Consensus       109 ~~~~~~id~lv~nAg~~~~------~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~  182 (336)
                      .+.++++|+||||||+...      ..+.+.++|++++++|+.+++.++++++|.|++       +|+||++||..+..+
T Consensus        79 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-------~g~iv~isS~~~~~~  151 (275)
T 2pd4_A           79 KKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNN-------GASVLTLSYLGSTKY  151 (275)
T ss_dssp             HHHTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE-------EEEEEEEECGGGTSB
T ss_pred             HHHcCCCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc-------CCEEEEEecchhcCC
Confidence            9999999999999998653      246788999999999999999999999999853       379999999877665


Q ss_pred             cCCcccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchh---HHHHHHH
Q 019722          183 SGDMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGF---ITDLVFF  259 (336)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~---~~~~~~~  259 (336)
                                       .+....|++||++++.|+++++.|+++.|  |+||+|+||+|+|++.+.....   .......
T Consensus       152 -----------------~~~~~~Y~asK~a~~~~~~~la~e~~~~g--i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~  212 (275)
T 2pd4_A          152 -----------------MAHYNVMGLAKAALESAVRYLAVDLGKHH--IRVNALSAGPIRTLASSGIADFRMILKWNEIN  212 (275)
T ss_dssp             -----------------CTTCHHHHHHHHHHHHHHHHHHHHHHTTT--CEEEEEEECCCCCTTGGGSTTHHHHHHHHHHH
T ss_pred             -----------------CCCchhhHHHHHHHHHHHHHHHHHhhhcC--eEEEEEeeCccccchhhhccccHHHHHHHHhc
Confidence                             56677899999999999999999999887  9999999999999997654221   1111122


Q ss_pred             HHHhhcCChHHHHHHHHHHHhcCccccCCceeeccCcccc---cccCCCCHHHHHHHHHHHHH
Q 019722          260 LTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAW---TSKLGSNSNEASRLWAASEL  319 (336)
Q Consensus       260 ~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~---~~~~~~~~~~~~~~w~~~~~  319 (336)
                      .+..+..+|+|+|..++|+++ +...+++|+++..+|+..   .++...|.+.++++|+++++
T Consensus       213 ~p~~~~~~p~dva~~~~~l~s-~~~~~~tG~~~~vdgg~~~~~~~~~~~~~~~~~~lw~~s~~  274 (275)
T 2pd4_A          213 APLRKNVSLEEVGNAGMYLLS-SLSSGVSGEVHFVDAGYHVMGMGAVEEKDNKATLLWDLHKE  274 (275)
T ss_dssp             STTSSCCCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTGGGBSSCCCTTCTTTTCCHHHHSSC
T ss_pred             CCcCCCCCHHHHHHHHHHHhC-ccccCCCCCEEEECCCcccCCCChhhcCcccchhhhhhhcc
Confidence            233456799999999999997 667889999998888743   35667788999999998754

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=100.00  E-value=3.2e-41  Score=298.73  Aligned_cols=240  Identities=26%  Similarity=0.336  Sum_probs=206.8

Q ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeC-ChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHh
Q 019722           32 NLSSVTAIITGATSGIGAETARVLAKRGARLVLPAR-SLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHS  110 (336)
Q Consensus        32 ~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  110 (336)
                      +|+||++|||||++|||++++++|+++|++|++++| +.+++++..++++..  +.++.++++|++|+++++++++++.+
T Consensus         1 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   78 (246)
T 2uvd_A            1 MLKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKL--GSDAIAVRADVANAEDVTNMVKQTVD   78 (246)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence            468999999999999999999999999999999999 888888877777654  56799999999999999999999999


Q ss_pred             cCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccc
Q 019722          111 LNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIR  188 (336)
Q Consensus       111 ~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~  188 (336)
                      .++++|+||||||+....  .+.+.++|++++++|+.+++.++++++|.|++++     .++||++||..+..+      
T Consensus        79 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-----~g~iv~isS~~~~~~------  147 (246)
T 2uvd_A           79 VFGQVDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQR-----HGRIVNIASVVGVTG------  147 (246)
T ss_dssp             HHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-----CEEEEEECCTHHHHC------
T ss_pred             HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-----CcEEEEECCHHhcCC------
Confidence            999999999999976543  5678899999999999999999999999998765     489999999987765      


Q ss_pred             ccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhH-HHHHHHHHHhhcCC
Q 019722          189 YLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFI-TDLVFFLTSKLLKT  267 (336)
Q Consensus       189 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~-~~~~~~~~~~~~~~  267 (336)
                                 .+....|++||++++.++++++.|+++.|  |+||+|+||+++|++.+...... .......+..+..+
T Consensus       148 -----------~~~~~~Y~asK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~p~~~~~~  214 (246)
T 2uvd_A          148 -----------NPGQANYVAAKAGVIGLTKTSAKELASRN--ITVNAIAPGFIATDMTDVLDENIKAEMLKLIPAAQFGE  214 (246)
T ss_dssp             -----------CTTBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBGGGCSSCCCTTHHHHHHHTCTTCSCBC
T ss_pred             -----------CCCCchHHHHHHHHHHHHHHHHHHhhhcC--eEEEEEEeccccCcchhhcCHHHHHHHHhcCCCCCCcC
Confidence                       56678899999999999999999999888  99999999999999877643222 22222223345678


Q ss_pred             hHHHHHHHHHHHhcCccccCCceeeccCccc
Q 019722          268 IPQGAATTCYVAIHPRLVNVSGKYFADCNEA  298 (336)
Q Consensus       268 ~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  298 (336)
                      |+|+|..++++++ +.+.+++|+.+..+|+.
T Consensus       215 ~~dvA~~~~~l~s-~~~~~~tG~~~~vdgG~  244 (246)
T 2uvd_A          215 AQDIANAVTFFAS-DQSKYITGQTLNVDGGM  244 (246)
T ss_dssp             HHHHHHHHHHHHS-GGGTTCCSCEEEESTTS
T ss_pred             HHHHHHHHHHHcC-chhcCCCCCEEEECcCc
Confidence            9999999999986 67789999999988874

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=100.00  E-value=3.3e-41  Score=301.02  Aligned_cols=246  Identities=23%  Similarity=0.232  Sum_probs=199.6

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      .++++||++|||||++|||++++++|+++|++|++++|+.+++++..+++     +.++.++++|++++++++++++++.
T Consensus         4 ~m~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~   78 (261)
T 3n74_A            4 SMSLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEI-----GDAALAVAADISKEADVDAAVEAAL   78 (261)
T ss_dssp             -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----CTTEEEEECCTTSHHHHHHHHHHHH
T ss_pred             cccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh-----CCceEEEEecCCCHHHHHHHHHHHH
Confidence            67899999999999999999999999999999999999999888877765     5689999999999999999999999


Q ss_pred             hcCCCccEEEEcccCCCCC---CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCc
Q 019722          110 SLNLPLNLLINNAGKFAHQ---HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDM  186 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~~~---~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~  186 (336)
                      +.++++|+||||||+....   .+.+.++|++++++|+.+++.++++++|.|++++. .+..++||++||..+..+    
T Consensus        79 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~-~~~~~~iv~isS~~~~~~----  153 (261)
T 3n74_A           79 SKFGKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGA-KGQECVILNVASTGAGRP----  153 (261)
T ss_dssp             HHHSCCCEEEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHH-TTCCEEEEEECCTTTTSC----
T ss_pred             HhcCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC-CCCCeEEEEeCchhhcCC----
Confidence            9999999999999976532   55688999999999999999999999999987642 122478999999987765    


Q ss_pred             ccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccch-----hHHHHHHHHH
Q 019722          187 IRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREG-----FITDLVFFLT  261 (336)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~-----~~~~~~~~~~  261 (336)
                                   .+....|++||++++.|+++++.|+++.|  |+||+|+||+++|++.+....     .........+
T Consensus       154 -------------~~~~~~Y~asKaa~~~~~~~la~e~~~~g--i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~  218 (261)
T 3n74_A          154 -------------RPNLAWYNATKGWVVSVTKALAIELAPAK--IRVVALNPVAGETPLLTTFMGEDSEEIRKKFRDSIP  218 (261)
T ss_dssp             -------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEEC-------------------------CT
T ss_pred             -------------CCCccHHHHHHHHHHHHHHHHHHHhhhcC--cEEEEEecCcccChhhhhhcccCcHHHHHHHhhcCC
Confidence                         66778899999999999999999999988  999999999999999875421     1112222334


Q ss_pred             HhhcCChHHHHHHHHHHHhcCccccCCceeeccCcccccc
Q 019722          262 SKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWTS  301 (336)
Q Consensus       262 ~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~~  301 (336)
                      ..+..+|+|+|.+++|+++ +...+++|+.+.++|+....
T Consensus       219 ~~~~~~~~dva~~~~~l~s-~~~~~itG~~i~vdgG~~~~  257 (261)
T 3n74_A          219 MGRLLKPDDLAEAAAFLCS-PQASMITGVALDVDGGRSIG  257 (261)
T ss_dssp             TSSCCCHHHHHHHHHHHTS-GGGTTCCSCEEEESTTTTC-
T ss_pred             cCCCcCHHHHHHHHHHHcC-CcccCcCCcEEEecCCcccC
Confidence            4566789999999999997 77889999999999986554

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=100.00  E-value=5e-42  Score=306.26  Aligned_cols=242  Identities=23%  Similarity=0.220  Sum_probs=197.5

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEe-eCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLP-ARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQF  108 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~-~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~  108 (336)
                      +++++||++|||||++|||++++++|+++|++|+++ .|+.+..++..+++++.  +.++.++++|++++++++++++++
T Consensus         3 ~~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~   80 (259)
T 3edm_A            3 LQRFTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKL--GRSALAIKADLTNAAEVEAAISAA   80 (259)
T ss_dssp             -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTT--TSCCEEEECCTTCHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHH
Confidence            467999999999999999999999999999999998 56777777777777665  568999999999999999999999


Q ss_pred             HhcCCCccEEEEcccCCCC---CCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccc-cccC
Q 019722          109 HSLNLPLNLLINNAGKFAH---QHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHS-WFSG  184 (336)
Q Consensus       109 ~~~~~~id~lv~nAg~~~~---~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~-~~~~  184 (336)
                      .+.++++|+||||||....   ..+.+.++|++++++|+.|++.++++++|.|++       .|+||++||..+. .+  
T Consensus        81 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~-------~g~iv~isS~~~~~~~--  151 (259)
T 3edm_A           81 ADKFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAK-------GGAIVTFSSQAGRDGG--  151 (259)
T ss_dssp             HHHHCSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE-------EEEEEEECCHHHHHCC--
T ss_pred             HHHhCCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc-------CCEEEEEcCHHhccCC--
Confidence            9999999999999997632   267788999999999999999999999999865       3799999998776 33  


Q ss_pred             CcccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccc--hhHHHHHHHHHH
Q 019722          185 DMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRERE--GFITDLVFFLTS  262 (336)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~--~~~~~~~~~~~~  262 (336)
                                     .++...|++||++++.|+++++.|+++.   |+||+|+||+|+|++.+...  ..........+.
T Consensus       152 ---------------~~~~~~Y~asKaa~~~l~~~la~e~~~~---I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~p~  213 (259)
T 3edm_A          152 ---------------GPGALAYATSKGAVMTFTRGLAKEVGPK---IRVNAVCPGMISTTFHDTFTKPEVRERVAGATSL  213 (259)
T ss_dssp             ---------------STTCHHHHHHHHHHHHHHHHHHHHHTTT---CEEEEEEECCBCC---------------------
T ss_pred             ---------------CCCcHHHHHHHHHHHHHHHHHHHHHCCC---CEEEEEEECCCcCcccccccChHHHHHHHhcCCC
Confidence                           5667889999999999999999999763   99999999999999987653  222233344556


Q ss_pred             hhcCChHHHHHHHHHHHhcCccccCCceeeccCcccccc
Q 019722          263 KLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWTS  301 (336)
Q Consensus       263 ~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~~  301 (336)
                      .+..+|+|+|.+++|+++ +.+.++||+.+.++|+....
T Consensus       214 ~r~~~pedva~~v~~L~s-~~~~~itG~~i~vdGg~~~~  251 (259)
T 3edm_A          214 KREGSSEDVAGLVAFLAS-DDAAYVTGACYDINGGVLFS  251 (259)
T ss_dssp             -CCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESBCSSBC
T ss_pred             CCCcCHHHHHHHHHHHcC-ccccCccCCEEEECCCcCCC
Confidence            677899999999999987 77789999999999986554

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=100.00  E-value=4.4e-42  Score=305.06  Aligned_cols=238  Identities=22%  Similarity=0.260  Sum_probs=203.4

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCC-CceEEEeccCCCHHHHHHHHHHHH
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPG-SDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      +++++|++|||||++|||++++++|+++|++|++++|+.+++++..+++....++ .++.++++|++++++++++++++.
T Consensus         3 ~~~~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   82 (250)
T 3nyw_A            3 LEKQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIH   82 (250)
T ss_dssp             --CCCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHH
Confidence            3688999999999999999999999999999999999999999999988876544 789999999999999999999999


Q ss_pred             hcCCCccEEEEcccCCCCC-CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccc
Q 019722          110 SLNLPLNLLINNAGKFAHQ-HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIR  188 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~~~-~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~  188 (336)
                      +.++++|+||||||+.... .+.+.++|++++++|+.+++.++++++|.|++++     .|+||++||..+..+      
T Consensus        83 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-----~g~iv~isS~~~~~~------  151 (250)
T 3nyw_A           83 QKYGAVDILVNAAAMFMDGSLSEPVDNFRKIMEINVIAQYGILKTVTEIMKVQK-----NGYIFNVASRAAKYG------  151 (250)
T ss_dssp             HHHCCEEEEEECCCCCCCCCCSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-----CEEEEEECC------------
T ss_pred             HhcCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-----CeEEEEEccHHhcCC------
Confidence            9999999999999986543 4567789999999999999999999999998876     589999999988764      


Q ss_pred             ccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHHHHHHHHhhcCCh
Q 019722          189 YLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSKLLKTI  268 (336)
Q Consensus       189 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~  268 (336)
                                 .+....|++||+++++|+++++.|+++.|  |+||+|+||+|+|++.+....       ..+..+..+|
T Consensus       152 -----------~~~~~~Y~asKaa~~~l~~~la~e~~~~g--i~vn~v~PG~v~T~~~~~~~~-------~~~~~~~~~p  211 (250)
T 3nyw_A          152 -----------FADGGIYGSTKFALLGLAESLYRELAPLG--IRVTTLCPGWVNTDMAKKAGT-------PFKDEEMIQP  211 (250)
T ss_dssp             ------------CCTTHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEESSBCSHHHHHTTC-------CSCGGGSBCH
T ss_pred             -----------CCCCcchHHHHHHHHHHHHHHHHHhhhcC--cEEEEEecCcccCchhhhcCC-------CcccccCCCH
Confidence                       33467899999999999999999999988  999999999999998654321       1233456799


Q ss_pred             HHHHHHHHHHHhcCccccCCceeeccCcccc
Q 019722          269 PQGAATTCYVAIHPRLVNVSGKYFADCNEAW  299 (336)
Q Consensus       269 ~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  299 (336)
                      +|++..++|+++.+...+++|..+..||+..
T Consensus       212 ~dva~~v~~l~s~~~~~~~~~~~i~vd~~~~  242 (250)
T 3nyw_A          212 DDLLNTIRCLLNLSENVCIKDIVFEMKKSII  242 (250)
T ss_dssp             HHHHHHHHHHHTSCTTEECCEEEEEEHHHHH
T ss_pred             HHHHHHHHHHHcCCCceEeeEEEEEeecccc
Confidence            9999999999998888888999998888743

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=100.00  E-value=4.1e-41  Score=303.09  Aligned_cols=250  Identities=24%  Similarity=0.254  Sum_probs=206.9

Q ss_pred             ccccCCCCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHH
Q 019722           24 EQVTDGCPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRN  103 (336)
Q Consensus        24 ~~~~~~~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~  103 (336)
                      ..|+. .++++||++|||||++|||++++++|+++|++|++++|+.+++++..+++...  + ++.++++|+++++++++
T Consensus        19 ~~~~~-~~~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~--~-~~~~~~~Dv~d~~~v~~   94 (276)
T 2b4q_A           19 SHMHP-YFSLAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAY--G-DCQAIPADLSSEAGARR   94 (276)
T ss_dssp             --CCT-TTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTS--S-CEEECCCCTTSHHHHHH
T ss_pred             ccccc-ccCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--C-ceEEEEeeCCCHHHHHH
Confidence            44444 67899999999999999999999999999999999999998888887777543  3 78999999999999999


Q ss_pred             HHHHHHhcCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCcccc
Q 019722          104 FVSQFHSLNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSW  181 (336)
Q Consensus       104 ~~~~~~~~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~  181 (336)
                      +++++.+.++++|+||||||+....  .+.+.++|++++++|+.+++.++++++|.|++++. ....++||++||..+..
T Consensus        95 ~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~-~~~~g~iV~isS~~~~~  173 (276)
T 2b4q_A           95 LAQALGELSARLDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSAS-AENPARVINIGSVAGIS  173 (276)
T ss_dssp             HHHHHHHHCSCCSEEEECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCC-SSSCEEEEEECCGGGTC
T ss_pred             HHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccC-CCCCCEEEEECCHHHcC
Confidence            9999999999999999999976543  56788999999999999999999999999987641 01127999999987765


Q ss_pred             ccCCcccccccccCCCCCCChhh-HhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhH-HHHHH-
Q 019722          182 FSGDMIRYLGQISRNKSHYDATR-AYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFI-TDLVF-  258 (336)
Q Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~-~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~-~~~~~-  258 (336)
                      +                 .+... .|++||++++.|+++++.|+++.|  |+||+|+||+++|++.+...... ..... 
T Consensus       174 ~-----------------~~~~~~~Y~asK~a~~~~~~~la~e~~~~g--I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~  234 (276)
T 2b4q_A          174 A-----------------MGEQAYAYGPSKAALHQLSRMLAKELVGEH--INVNVIAPGRFPSRMTRHIANDPQALEADS  234 (276)
T ss_dssp             C-----------------CCCSCTTHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCCCSTTTHHHHHCHHHHHHHH
T ss_pred             C-----------------CCCCccccHHHHHHHHHHHHHHHHHhcccC--eEEEEEEeccCcCcchhhcchhHHHHHHhh
Confidence            4                 34445 799999999999999999999888  99999999999999876422111 11111 


Q ss_pred             -HHHHhhcCChHHHHHHHHHHHhcCccccCCceeeccCccc
Q 019722          259 -FLTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEA  298 (336)
Q Consensus       259 -~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  298 (336)
                       ..+..+..+|+|+|..++|+++ +.+.+++|+.+.++|+.
T Consensus       235 ~~~p~~r~~~p~dvA~~v~~l~s-~~~~~~tG~~i~vdGG~  274 (276)
T 2b4q_A          235 ASIPMGRWGRPEEMAALAISLAG-TAGAYMTGNVIPIDGGF  274 (276)
T ss_dssp             HTSTTSSCCCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTT
T ss_pred             cCCCCCCcCCHHHHHHHHHHHhC-ccccCCCCCEEEeCCCc
Confidence             2233456799999999999987 56789999999998874

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=100.00  E-value=2e-41  Score=302.87  Aligned_cols=239  Identities=23%  Similarity=0.243  Sum_probs=205.1

Q ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhc
Q 019722           32 NLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSL  111 (336)
Q Consensus        32 ~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  111 (336)
                      +++||++|||||++|||++++++|+++|++|++++|+.+.+++..++++..  +.++.++++|++++++++++++++.+.
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   81 (262)
T 1zem_A            4 KFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREK--GVEARSYVCDVTSEEAVIGTVDSVVRD   81 (262)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT--TSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            588999999999999999999999999999999999999888888887654  567999999999999999999999999


Q ss_pred             CCCccEEEEcccCC-CC--CCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccc
Q 019722          112 NLPLNLLINNAGKF-AH--QHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIR  188 (336)
Q Consensus       112 ~~~id~lv~nAg~~-~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~  188 (336)
                      ++++|+||||||+. ..  ..+.+.++|++++++|+.+++.++++++|.|.+++     .|+||++||..+..+      
T Consensus        82 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-----~g~iv~isS~~~~~~------  150 (262)
T 1zem_A           82 FGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQN-----YGRIVNTASMAGVKG------  150 (262)
T ss_dssp             HSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-----CEEEEEECCHHHHSC------
T ss_pred             hCCCCEEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-----CcEEEEEcchhhccC------
Confidence            99999999999976 32  25678899999999999999999999999998765     489999999887765      


Q ss_pred             ccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCcc-------------c--h--
Q 019722          189 YLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRER-------------E--G--  251 (336)
Q Consensus       189 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~-------------~--~--  251 (336)
                                 .+....|++||++++.|+++++.|+++.|  |+||+|+||++.|++....             .  .  
T Consensus       151 -----------~~~~~~Y~asK~a~~~~~~~la~e~~~~g--i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~  217 (262)
T 1zem_A          151 -----------PPNMAAYGTSKGAIIALTETAALDLAPYN--IRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKV  217 (262)
T ss_dssp             -----------CTTBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHH
T ss_pred             -----------CCCCchHHHHHHHHHHHHHHHHHHHHhhC--eEEEEEecCCcCcchhhhhccchhhhccccccccCHHH
Confidence                       56678899999999999999999999988  9999999999999986542             1  1  


Q ss_pred             hHHHHHHHHHHhhcCChHHHHHHHHHHHhcCccccCCceeeccCcc
Q 019722          252 FITDLVFFLTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNE  297 (336)
Q Consensus       252 ~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~  297 (336)
                      .........+..+..+|+|+|..++|+++ +.+.+++|+.+.++|+
T Consensus       218 ~~~~~~~~~p~~r~~~p~dvA~~v~~l~s-~~~~~itG~~i~vdGG  262 (262)
T 1zem_A          218 VAQQMIGSVPMRRYGDINEIPGVVAFLLG-DDSSFMTGVNLPIAGG  262 (262)
T ss_dssp             HHHHHHHTSTTSSCBCGGGSHHHHHHHHS-GGGTTCCSCEEEESCC
T ss_pred             HHHHHHhcCCCCCCcCHHHHHHHHHHHcC-chhcCcCCcEEecCCC
Confidence            11111112233456789999999999997 6678999999988874

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=100.00  E-value=5.6e-42  Score=305.50  Aligned_cols=245  Identities=24%  Similarity=0.204  Sum_probs=191.8

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      +++++||++|||||++|||++++++|+++|++|++++|+.+.+++..+++     +.++.++++|++++++++++++++.
T Consensus         2 ~~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~   76 (257)
T 3tpc_A            2 VMQLKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAEL-----GAAVRFRNADVTNEADATAALAFAK   76 (257)
T ss_dssp             --CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC-----------------CEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh-----CCceEEEEccCCCHHHHHHHHHHHH
Confidence            36789999999999999999999999999999999999998877766655     4578999999999999999999999


Q ss_pred             hcCCCccEEEEcccCCCCC------CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccC-CCCCeEEEEcCCccccc
Q 019722          110 SLNLPLNLLINNAGKFAHQ------HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKAT-GIQGRIVNVSSSIHSWF  182 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~~~------~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~-~~~grIV~vsS~~~~~~  182 (336)
                      +.++++|+||||||+....      .+.+.++|++++++|+.+++.++++++|.|+++.... ...|+||++||..+..+
T Consensus        77 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~~~~  156 (257)
T 3tpc_A           77 QEFGHVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFDG  156 (257)
T ss_dssp             HHHSCCCEEEECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHC
T ss_pred             HHcCCCCEEEECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhhccC
Confidence            9999999999999987543      2567789999999999999999999999998742110 12589999999988776


Q ss_pred             cCCcccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHHH-HHHH
Q 019722          183 SGDMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLV-FFLT  261 (336)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~-~~~~  261 (336)
                                       .++...|++||++++.|+++++.|+++.|  |+||+|+||+|+|++.+.......... ...+
T Consensus       157 -----------------~~~~~~Y~asKaa~~~~~~~la~e~~~~g--i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~p  217 (257)
T 3tpc_A          157 -----------------QIGQAAYAASKGGVAALTLPAARELARFG--IRVVTIAPGIFDTPMMAGMPQDVQDALAASVP  217 (257)
T ss_dssp             -----------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCBSCC--------------CCSS
T ss_pred             -----------------CCCCcchHHHHHHHHHHHHHHHHHHHHcC--eEEEEEEeCCCCChhhccCCHHHHHHHHhcCC
Confidence                             66778999999999999999999999988  999999999999999876533221111 1122


Q ss_pred             H-hhcCChHHHHHHHHHHHhcCccccCCceeeccCcccccc
Q 019722          262 S-KLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWTS  301 (336)
Q Consensus       262 ~-~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~~  301 (336)
                      . .+...|+|++..++|+++ +  .+++|+.+.++|+....
T Consensus       218 ~~~r~~~~~dva~~v~~l~s-~--~~itG~~i~vdGG~~~~  255 (257)
T 3tpc_A          218 FPPRLGRAEEYAALVKHICE-N--TMLNGEVIRLDGALRMA  255 (257)
T ss_dssp             SSCSCBCHHHHHHHHHHHHH-C--TTCCSCEEEESTTCCC-
T ss_pred             CCCCCCCHHHHHHHHHHHcc-c--CCcCCcEEEECCCccCC
Confidence            2 456789999999999997 3  68999999999986543

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=100.00  E-value=1.7e-41  Score=306.90  Aligned_cols=256  Identities=18%  Similarity=0.178  Sum_probs=201.0

Q ss_pred             CCCCCEEEEeCCC--ChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           32 NLSSVTAIITGAT--SGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        32 ~l~gk~~lItGgs--~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      +++||++|||||+  +|||++++++|+++|++|++++|+.+ .++..+++....+  ++.++++|++++++++++++++.
T Consensus        18 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~--~~~~~~~Dl~~~~~v~~~~~~~~   94 (285)
T 2p91_A           18 LLEGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPK-LEKRVREIAKGFG--SDLVVKCDVSLDEDIKNLKKFLE   94 (285)
T ss_dssp             TTTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGG-GHHHHHHHHHHTT--CCCEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHHHHhcC--CeEEEEcCCCCHHHHHHHHHHHH
Confidence            4899999999999  99999999999999999999999985 4555566655432  37889999999999999999999


Q ss_pred             hcCCCccEEEEcccCCCC------CCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCcccccc
Q 019722          110 SLNLPLNLLINNAGKFAH------QHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFS  183 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~~------~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~  183 (336)
                      +.++++|+||||||+...      ..+.+.++|++++++|+.|++.++++++|.|+++      +|+||++||..+..+ 
T Consensus        95 ~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~------~g~iv~isS~~~~~~-  167 (285)
T 2p91_A           95 ENWGSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGR------NGAIVTLSYYGAEKV-  167 (285)
T ss_dssp             HHTSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTS------CCEEEEEECGGGTSB-
T ss_pred             HHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc------CCEEEEEccchhccC-
Confidence            999999999999997643      2467889999999999999999999999999653      489999999877655 


Q ss_pred             CCcccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchh---HHHHHHHH
Q 019722          184 GDMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGF---ITDLVFFL  260 (336)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~---~~~~~~~~  260 (336)
                                      .+....|++||++++.|+++++.|+++.|  |+||+|+||+|+|++.+.....   ........
T Consensus       168 ----------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~  229 (285)
T 2p91_A          168 ----------------VPHYNVMGIAKAALESTVRYLAYDIAKHG--HRINAISAGPVKTLAAYSITGFHLLMEHTTKVN  229 (285)
T ss_dssp             ----------------CTTTTHHHHHHHHHHHHHHHHHHHHHTTT--CEEEEEEECCCCCSCC--CTTHHHHHHHHHHHS
T ss_pred             ----------------CCCccHHHHHHHHHHHHHHHHHHHhcccC--cEEEEEEeCcccCchhhcccchHHHHHHHHhcC
Confidence                            56677899999999999999999999887  9999999999999987654221   11111222


Q ss_pred             HHhhcCChHHHHHHHHHHHhcCccccCCceeeccCcccc-cccCCCCHHHHHHHHHH
Q 019722          261 TSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAW-TSKLGSNSNEASRLWAA  316 (336)
Q Consensus       261 ~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~-~~~~~~~~~~~~~~w~~  316 (336)
                      +..+..+|+|+|.+++++++ +...+++|+.+.++|+.. ......|.+..+++|+.
T Consensus       230 p~~~~~~~~dva~~~~~l~s-~~~~~~tG~~~~vdgg~~~~~~~~~~~~~~~~lw~~  285 (285)
T 2p91_A          230 PFGKPITIEDVGDTAVFLCS-DWARAITGEVVHVDNGYHIMGVFGREEEIKKEVYGD  285 (285)
T ss_dssp             TTSSCCCHHHHHHHHHHHTS-GGGTTCCSCEEEESTTGGGBSCC-------------
T ss_pred             CCCCCcCHHHHHHHHHHHcC-CcccCCCCCEEEECCCcccccccCChHHHHHHhcCC
Confidence            33456789999999999987 667889999998888744 34567788999999973

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=100.00  E-value=7.4e-42  Score=309.54  Aligned_cols=246  Identities=24%  Similarity=0.290  Sum_probs=210.5

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCC---EEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHH
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGA---RLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQ  107 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~---~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~  107 (336)
                      .+|+||++|||||++|||+++|++|+++|+   +|++++|+.+.++++.+++....++.++.++++|++|++++++++++
T Consensus        29 ~~l~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~  108 (287)
T 3rku_A           29 ERLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIEN  108 (287)
T ss_dssp             HHHTTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHT
T ss_pred             hhcCCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHH
Confidence            347999999999999999999999999998   99999999999999999998877678999999999999999999999


Q ss_pred             HHhcCCCccEEEEcccCCCC---CCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccC
Q 019722          108 FHSLNLPLNLLINNAGKFAH---QHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSG  184 (336)
Q Consensus       108 ~~~~~~~id~lv~nAg~~~~---~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~  184 (336)
                      +.+.++++|+||||||+...   ..+.+.++|++++++|+.|++.++++++|.|++++     .|+||++||.++..+  
T Consensus       109 ~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-----~g~IV~isS~~~~~~--  181 (287)
T 3rku_A          109 LPQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKN-----SGDIVNLGSIAGRDA--  181 (287)
T ss_dssp             SCGGGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-----CCEEEEECCGGGTSC--
T ss_pred             HHHhcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-----CCeEEEECChhhcCC--
Confidence            99999999999999997642   25778899999999999999999999999998876     589999999988766  


Q ss_pred             CcccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccch-hHHHHHHHHHHh
Q 019722          185 DMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREG-FITDLVFFLTSK  263 (336)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~-~~~~~~~~~~~~  263 (336)
                                     .++...|++||++++.|+++++.|+++.|  |+||+|+||+|+|++...... ............
T Consensus       182 ---------------~~~~~~Y~asKaa~~~l~~~la~e~~~~g--Irvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~  244 (287)
T 3rku_A          182 ---------------YPTGSIYCASKFAVGAFTDSLRKELINTK--IRVILIAPGLVETEFSLVRYRGNEEQAKNVYKDT  244 (287)
T ss_dssp             ---------------CTTCHHHHHHHHHHHHHHHHHHHHTTTSS--CEEEEEEESCEESSHHHHHTTTCHHHHHHHHTTS
T ss_pred             ---------------CCCCchHHHHHHHHHHHHHHHHHHhhhcC--CEEEEEeCCcCcCccccccccCcHHHHHHhhccc
Confidence                           67788999999999999999999999888  999999999999998543211 111111222222


Q ss_pred             hcCChHHHHHHHHHHHhcCccccCCceeeccCcccccc
Q 019722          264 LLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWTS  301 (336)
Q Consensus       264 ~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~~  301 (336)
                      ....|+|+|.+++|+++ +...+++|+.+..+++...+
T Consensus       245 ~p~~pedvA~~v~~l~s-~~~~~i~g~~i~v~~g~~~p  281 (287)
T 3rku_A          245 TPLMADDVADLIVYATS-RKQNTVIADTLIFPTNQASP  281 (287)
T ss_dssp             CCEEHHHHHHHHHHHHT-SCTTEEEEEEEEEETTEEET
T ss_pred             CCCCHHHHHHHHHHHhC-CCCCeEecceEEeeCCCCCC
Confidence            23378999999999998 66788999999888775443

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=100.00  E-value=9.3e-43  Score=311.53  Aligned_cols=242  Identities=20%  Similarity=0.209  Sum_probs=199.1

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCC---hHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARS---LKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVS  106 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~---~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~  106 (336)
                      +++++||++|||||++|||+++|++|+++|++|++++|+   .+.++++.++++..  +.++.++++|++|+++++++++
T Consensus         6 ~~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~   83 (262)
T 3ksu_A            6 YHDLKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQ--GAKVALYQSDLSNEEEVAKLFD   83 (262)
T ss_dssp             CSCCTTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTT--TCEEEEEECCCCSHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHHHHHH
Confidence            678999999999999999999999999999999998764   45677777777665  6789999999999999999999


Q ss_pred             HHHhcCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccC
Q 019722          107 QFHSLNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSG  184 (336)
Q Consensus       107 ~~~~~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~  184 (336)
                      ++.+.++++|+||||||+....  .+.+.++|++++++|+.+++.++++++|.|.+       .|+||++||..+..+  
T Consensus        84 ~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~-------~g~iv~isS~~~~~~--  154 (262)
T 3ksu_A           84 FAEKEFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNP-------NGHIITIATSLLAAY--  154 (262)
T ss_dssp             HHHHHHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEE-------EEEEEEECCCHHHHH--
T ss_pred             HHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcC-------CCEEEEEechhhccC--
Confidence            9999999999999999976543  56788999999999999999999999999932       379999999887765  


Q ss_pred             CcccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccch--hHHHHHHHHHH
Q 019722          185 DMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREG--FITDLVFFLTS  262 (336)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~--~~~~~~~~~~~  262 (336)
                                     .+....|++||++++.|+++++.|+++.|  |+||+|+||+|+|++......  .........+.
T Consensus       155 ---------------~~~~~~Y~asKaa~~~l~~~la~e~~~~g--i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~  217 (262)
T 3ksu_A          155 ---------------TGFYSTYAGNKAPVEHYTRAASKELMKQQ--ISVNAIAPGPMDTSFFYGQETKESTAFHKSQAMG  217 (262)
T ss_dssp             ---------------HCCCCC-----CHHHHHHHHHHHHTTTTT--CEEEEEEECCCCTHHHHTCC------------CC
T ss_pred             ---------------CCCCchhHHHHHHHHHHHHHHHHHHHHcC--cEEEEEeeCCCcCccccccCchHHHHHHHhcCcc
Confidence                           44566799999999999999999999888  999999999999998765321  12222233444


Q ss_pred             hhcCChHHHHHHHHHHHhcCccccCCceeeccCcccccc
Q 019722          263 KLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWTS  301 (336)
Q Consensus       263 ~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~~  301 (336)
                      .+..+|+|+|.+++|+++ + +.++||+.+.++|+....
T Consensus       218 ~r~~~pedvA~~v~~L~s-~-~~~itG~~i~vdGg~~~~  254 (262)
T 3ksu_A          218 NQLTKIEDIAPIIKFLTT-D-GWWINGQTIFANGGYTTR  254 (262)
T ss_dssp             CCSCCGGGTHHHHHHHHT-T-TTTCCSCEEEESTTCCCC
T ss_pred             cCCCCHHHHHHHHHHHcC-C-CCCccCCEEEECCCccCC
Confidence            567899999999999997 5 789999999999985544

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=100.00  E-value=4.3e-41  Score=300.28  Aligned_cols=243  Identities=23%  Similarity=0.230  Sum_probs=207.2

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      .++++||++|||||++|||++++++|+++|++|++++|+.+.+++..++++..  +.++.++++|++++++++++++++.
T Consensus         4 ~~~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~   81 (260)
T 2ae2_A            4 RWNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSK--GFKVEASVCDLSSRSERQELMNTVA   81 (260)
T ss_dssp             TTCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCEEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHH
Confidence            56799999999999999999999999999999999999999888888887654  5689999999999999999999999


Q ss_pred             hcC-CCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCc
Q 019722          110 SLN-LPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDM  186 (336)
Q Consensus       110 ~~~-~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~  186 (336)
                      +.+ +++|+||||||+....  .+.+.++|++++++|+.+++.++++++|.|++++     .++||++||..+..+    
T Consensus        82 ~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-----~g~iv~isS~~~~~~----  152 (260)
T 2ae2_A           82 NHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASE-----RGNVVFISSVSGALA----  152 (260)
T ss_dssp             HHTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTS-----SEEEEEECCGGGTSC----
T ss_pred             HHcCCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-----CcEEEEEcchhhccC----
Confidence            988 8999999999976532  5678899999999999999999999999998764     489999999877654    


Q ss_pred             ccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccch---hHH---HHHHHH
Q 019722          187 IRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREG---FIT---DLVFFL  260 (336)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~---~~~---~~~~~~  260 (336)
                                   .+....|++||++++.++++++.|+++.|  |+||+|+||+++|++......   ...   ......
T Consensus       153 -------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~  217 (260)
T 2ae2_A          153 -------------VPYEAVYGATKGAMDQLTRCLAFEWAKDN--IRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRC  217 (260)
T ss_dssp             -------------CTTCHHHHHHHHHHHHHHHHHHHHTGGGT--EEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTS
T ss_pred             -------------CCCcchHHHHHHHHHHHHHHHHHHHhhcC--cEEEEEecCCCCCcchhhhccChhhHHHHHHHHhcC
Confidence                         56678899999999999999999999888  999999999999998654211   111   111112


Q ss_pred             HHhhcCChHHHHHHHHHHHhcCccccCCceeeccCcccc
Q 019722          261 TSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAW  299 (336)
Q Consensus       261 ~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  299 (336)
                      +..+...|+|+|..++++++ +.+.+++|+.+.++|+..
T Consensus       218 ~~~~~~~~~dvA~~v~~l~s-~~~~~~tG~~~~vdgG~~  255 (260)
T 2ae2_A          218 ALRRMGEPKELAAMVAFLCF-PAASYVTGQIIYVDGGLM  255 (260)
T ss_dssp             TTCSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTGG
T ss_pred             CCCCCCCHHHHHHHHHHHcC-ccccCCCCCEEEECCCcc
Confidence            23446789999999999987 667899999999998753

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=100.00  E-value=5.1e-41  Score=308.33  Aligned_cols=244  Identities=21%  Similarity=0.236  Sum_probs=205.7

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCC------------hHHHHHHHHHHHhhCCCCceEEEeccCCC
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARS------------LKAAEEAKARLASDCPGSDIVVLPLDLSS   97 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~------------~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~   97 (336)
                      +.+++||++|||||++|||+++|++|+++|++|++++|+            .+.+++..+++...  +.++.++++|++|
T Consensus        41 m~~l~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d  118 (317)
T 3oec_A           41 MNRLQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQ--GRRIIARQADVRD  118 (317)
T ss_dssp             -CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHT--TCCEEEEECCTTC
T ss_pred             hhccCCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhc--CCeEEEEECCCCC
Confidence            567999999999999999999999999999999999876            67777777777655  5789999999999


Q ss_pred             HHHHHHHHHHHHhcCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEc
Q 019722           98 LSSVRNFVSQFHSLNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVS  175 (336)
Q Consensus        98 ~~~v~~~~~~~~~~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vs  175 (336)
                      +++++++++++.+.++++|+||||||+....  .+.+.++|++++++|+.|++.++++++|.|++++.    .|+||++|
T Consensus       119 ~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~----~g~Iv~is  194 (317)
T 3oec_A          119 LASLQAVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQ----GGSVIFVS  194 (317)
T ss_dssp             HHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCS----CEEEEEEC
T ss_pred             HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCC----CCEEEEEC
Confidence            9999999999999999999999999976543  57788999999999999999999999999987632    48999999


Q ss_pred             CCccccccCCcccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccc-----
Q 019722          176 SSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRERE-----  250 (336)
Q Consensus       176 S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~-----  250 (336)
                      |..+..+                 .++...|++||++++.|+++++.|+++.|  |+||+|+||+|+|++.....     
T Consensus       195 S~~~~~~-----------------~~~~~~Y~asKaa~~~l~~~la~e~~~~g--I~vn~v~PG~v~T~~~~~~~~~~~~  255 (317)
T 3oec_A          195 STVGLRG-----------------APGQSHYAASKHGVQGLMLSLANEVGRHN--IRVNSVNPGAVNTEMALNEKLLKMF  255 (317)
T ss_dssp             CGGGSSC-----------------CTTBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBSSHHHHCHHHHHHH
T ss_pred             cHHhcCC-----------------CCCCcchHHHHHHHHHHHHHHHHHHhhcC--eEEEEEecCcccCccccchhhhhhh
Confidence            9988776                 67788999999999999999999999988  99999999999999864310     


Q ss_pred             ------hhHHHHHHHHH-----HhhcCChHHHHHHHHHHHhcCccccCCceeeccCcccc
Q 019722          251 ------GFITDLVFFLT-----SKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAW  299 (336)
Q Consensus       251 ------~~~~~~~~~~~-----~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  299 (336)
                            ...........     ..+...|+|+|.+++||++ +.+.++||+.+.++|+..
T Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~pedvA~av~fL~s-~~a~~itG~~i~vdGG~~  314 (317)
T 3oec_A          256 LPHLENPTREDAAELFSQLTLLPIPWVEPEDVSNAVAWLAS-DEARYIHGAAIPVDGGQL  314 (317)
T ss_dssp             CTTCSSCCHHHHHHHHTTTCSSSSSSBCHHHHHHHHHHHTS-GGGTTCCSCEEEESTTGG
T ss_pred             hhhccccchhHHHHHHhhhccCCCCCCCHHHHHHHHHHHcC-CcccCCCCCEEEECcchh
Confidence                  00000011000     0334589999999999987 778999999999998754

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=100.00  E-value=3.8e-41  Score=301.23  Aligned_cols=238  Identities=22%  Similarity=0.217  Sum_probs=191.6

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcC
Q 019722           33 LSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLN  112 (336)
Q Consensus        33 l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  112 (336)
                      +.+|++|||||++|||++++++|+++|++|++++|+.+++++..++++..  +.++.++.+|++++++++++++++.+.+
T Consensus         2 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   79 (264)
T 3tfo_A            2 VMDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDA--GGTALAQVLDVTDRHSVAAFAQAAVDTW   79 (264)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHT--TCEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            57899999999999999999999999999999999999999988888765  5689999999999999999999999999


Q ss_pred             CCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccccc
Q 019722          113 LPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYL  190 (336)
Q Consensus       113 ~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~  190 (336)
                      +++|+||||||+....  .+.+.++|++++++|+.|++.++++++|.|++++     .|+||++||.++..+        
T Consensus        80 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-----~g~IV~isS~~~~~~--------  146 (264)
T 3tfo_A           80 GRIDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQR-----SGQIINIGSIGALSV--------  146 (264)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-----CEEEEEECCGGGTCC--------
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-----CeEEEEEcCHHHccc--------
Confidence            9999999999986543  5678899999999999999999999999998876     589999999988776        


Q ss_pred             ccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHHHHHHHHhhcCChHH
Q 019722          191 GQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSKLLKTIPQ  270 (336)
Q Consensus       191 ~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~  270 (336)
                               .++...|++||+++++|+++++.|+ + |  ||||+|+||+|+|++......................|+|
T Consensus       147 ---------~~~~~~Y~asKaal~~l~~~la~e~-~-g--Irvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~ped  213 (264)
T 3tfo_A          147 ---------VPTAAVYCATKFAVRAISDGLRQES-T-N--IRVTCVNPGVVESELAGTITHEETMAAMDTYRAIALQPAD  213 (264)
T ss_dssp             ---------CTTCHHHHHHHHHHHHHHHHHHHHC-S-S--EEEEEEEECCC-----------------------CCCHHH
T ss_pred             ---------CCCChhHHHHHHHHHHHHHHHHHhC-C-C--CEEEEEecCCCcCcccccccchhHHHHHHhhhccCCCHHH
Confidence                     6778899999999999999999997 3 6  9999999999999998764321111111111223468999


Q ss_pred             HHHHHHHHHhcCccccCCceeeccCcccc
Q 019722          271 GAATTCYVAIHPRLVNVSGKYFADCNEAW  299 (336)
Q Consensus       271 ~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  299 (336)
                      +|.+++|+++. ...+.+|+.+...+...
T Consensus       214 vA~~v~~l~s~-~~~~~~~~i~i~p~~~~  241 (264)
T 3tfo_A          214 IARAVRQVIEA-PQSVDTTEITIRPTASG  241 (264)
T ss_dssp             HHHHHHHHHHS-CTTEEEEEEEEEECC--
T ss_pred             HHHHHHHHhcC-CccCccceEEEecCccc
Confidence            99999999984 45667777765555433

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=100.00  E-value=3.2e-41  Score=306.07  Aligned_cols=248  Identities=18%  Similarity=0.162  Sum_probs=203.9

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEee-CChHHHHHHHHHHHhhCCCCceEEEeccCCCHH---------
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPA-RSLKAAEEAKARLASDCPGSDIVVLPLDLSSLS---------   99 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~-r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~---------   99 (336)
                      +++|+||++|||||++|||++++++|+++|++|++++ |+.+.+++..+++.... +.++.++++|+++++         
T Consensus         4 m~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~   82 (291)
T 1e7w_A            4 MTAPTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARR-PNSAITVQADLSNVATAPVSGADG   82 (291)
T ss_dssp             ----CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHS-TTCEEEEECCCSSSCBCCCC----
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhhhc-CCeeEEEEeecCCccccccccccc
Confidence            5679999999999999999999999999999999999 99998888888876333 468999999999999         


Q ss_pred             --------HHHHHHHHHHhcCCCccEEEEcccCCCCC--CCCC--------------chhhhhHHHHHHhHHHHHHHHHH
Q 019722          100 --------SVRNFVSQFHSLNLPLNLLINNAGKFAHQ--HAIS--------------EDGIEMTFATNYLGHFLLTKLLL  155 (336)
Q Consensus       100 --------~v~~~~~~~~~~~~~id~lv~nAg~~~~~--~~~~--------------~~~~~~~~~vn~~~~~~l~~~~~  155 (336)
                              +++++++++.+.++++|+||||||+....  .+.+              .++|++++++|+.+++.++++++
T Consensus        83 ~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~  162 (291)
T 1e7w_A           83 SAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFA  162 (291)
T ss_dssp             CCCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred             ccccchHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHhHHHHHHHHHHH
Confidence                    99999999999999999999999976432  4556              78999999999999999999999


Q ss_pred             HHHHHhhc-cCCCCCeEEEEcCCccccccCCcccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEE
Q 019722          156 KKMIETAK-ATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVN  234 (336)
Q Consensus       156 ~~l~~~~~-~~~~~grIV~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn  234 (336)
                      |.|++++. ..+..++||++||..+..+                 .++...|++||++++.|+++++.|+++.|  |+||
T Consensus       163 ~~m~~~~~~~~~~~g~Iv~isS~~~~~~-----------------~~~~~~Y~asKaa~~~l~~~la~e~~~~g--I~vn  223 (291)
T 1e7w_A          163 HRVAGTPAKHRGTNYSIINMVDAMTNQP-----------------LLGYTIYTMAKGALEGLTRSAALELAPLQ--IRVN  223 (291)
T ss_dssp             HHHHTSCGGGSCSCEEEEEECCTTTTSC-----------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEE
T ss_pred             HHHHhcCCCCCCCCcEEEEEechhhcCC-----------------CCCCchhHHHHHHHHHHHHHHHHHHHhcC--eEEE
Confidence            99986431 0111379999999987765                 66788999999999999999999999988  9999


Q ss_pred             EeeCCceeCCCCCccch-hHHHHHHHHHHh-hcCChHHHHHHHHHHHhcCccccCCceeeccCccccc
Q 019722          235 CVHPGIVRTRLTREREG-FITDLVFFLTSK-LLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWT  300 (336)
Q Consensus       235 ~v~PG~v~T~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~  300 (336)
                      +|+||+|+|++ + ... .........+.. +..+|+|+|..++|+++ +.+.+++|+++.++|+...
T Consensus       224 ~v~PG~v~T~~-~-~~~~~~~~~~~~~p~~~r~~~pedvA~~v~~l~s-~~~~~itG~~i~vdGG~~~  288 (291)
T 1e7w_A          224 GVGPGLSVLVD-D-MPPAVWEGHRSKVPLYQRDSSAAEVSDVVIFLCS-SKAKYITGTCVKVDGGYSL  288 (291)
T ss_dssp             EEEESSBCCGG-G-SCHHHHHHHHTTCTTTTSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTGGG
T ss_pred             EEeeCCccCCc-c-CCHHHHHHHHhhCCCCCCCCCHHHHHHHHHHHhC-CcccCccCcEEEECCCccc
Confidence            99999999999 4 321 111111112333 56789999999999997 6778999999999988544

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=100.00  E-value=8.2e-42  Score=309.01  Aligned_cols=253  Identities=17%  Similarity=0.187  Sum_probs=206.3

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCC------------hHHHHHHHHHHHhhCCCCceEEEeccCCC
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARS------------LKAAEEAKARLASDCPGSDIVVLPLDLSS   97 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~------------~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~   97 (336)
                      |++++||++|||||++|||+++|++|+++|++|++++|+            .+.+++...+++..  +.++.++++|+++
T Consensus         5 m~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~   82 (287)
T 3pxx_A            5 MGRVQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKT--GRKAYTAEVDVRD   82 (287)
T ss_dssp             CCTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHT--TSCEEEEECCTTC
T ss_pred             ccccCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhc--CCceEEEEccCCC
Confidence            668999999999999999999999999999999999987            67777777776654  5789999999999


Q ss_pred             HHHHHHHHHHHHhcCCCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCC
Q 019722           98 LSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSS  177 (336)
Q Consensus        98 ~~~v~~~~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~  177 (336)
                      +++++++++++.+.++++|+||||||+.......+.++|++++++|+.+++.++++++|.|.+       .++||++||.
T Consensus        83 ~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-------~g~iv~isS~  155 (287)
T 3pxx_A           83 RAAVSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTS-------GASIITTGSV  155 (287)
T ss_dssp             HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCT-------TCEEEEECCH
T ss_pred             HHHHHHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhc-------CcEEEEeccc
Confidence            999999999999999999999999998765545788999999999999999999999999832       4899999998


Q ss_pred             ccccccCCcccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccch------
Q 019722          178 IHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREG------  251 (336)
Q Consensus       178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~------  251 (336)
                      .+..+...      .........++...|++||++++.|+++++.|+++.|  |+||+|+||+|+|++.+....      
T Consensus       156 ~~~~~~~~------~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~g--i~vn~v~PG~v~T~~~~~~~~~~~~~~  227 (287)
T 3pxx_A          156 AGLIAAAQ------PPGAGGPQGPGGAGYSYAKQLVDSYTLQLAAQLAPQS--IRANVIHPTNVNTDMLNSAPMYRQFRP  227 (287)
T ss_dssp             HHHHHHHC------CC-----CHHHHHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEESSBSSTTTSSHHHHHHHCT
T ss_pred             hhcccccc------cccccccCCCccchHHHHHHHHHHHHHHHHHHHhhcC--cEEEEEecCccccccccccchhhhhcc
Confidence            77654211      0011111136778899999999999999999999988  999999999999999875211      


Q ss_pred             -----hHHHHHHHHH-----HhhcCChHHHHHHHHHHHhcCccccCCceeeccCccccc
Q 019722          252 -----FITDLVFFLT-----SKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWT  300 (336)
Q Consensus       252 -----~~~~~~~~~~-----~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~  300 (336)
                           ..........     ..+...|+|+|.+++||++ +.+.++||+.+.++|+...
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~dva~~v~fL~s-~~a~~itG~~i~vdGG~~~  285 (287)
T 3pxx_A          228 DLEAPSRADALLAFPAMQAMPTPYVEASDISNAVCFLAS-DESRYVTGLQFKVDAGAML  285 (287)
T ss_dssp             TSSSCCHHHHHHHGGGGCSSSCSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTGGG
T ss_pred             ccccchhHHHHhhhhhhcccCCCCCCHHHHHhhHheecc-hhhcCCCCceEeECchhhh
Confidence                 0000011000     1445688999999999997 7789999999999998543

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=100.00  E-value=3.1e-41  Score=300.30  Aligned_cols=243  Identities=21%  Similarity=0.219  Sum_probs=207.7

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEee-CChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPA-RSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQF  108 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~-r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~  108 (336)
                      ..++.+|++|||||++|||+++|++|+++|++|++++ |+.+...+..+++...  +.++.++++|++++++++++++++
T Consensus         8 ~~~~~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~   85 (256)
T 3ezl_A            8 HMVMSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKAL--GFDFYASEGNVGDWDSTKQAFDKV   85 (256)
T ss_dssp             -----CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHT--TCCCEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc--CCeeEEEecCCCCHHHHHHHHHHH
Confidence            4568999999999999999999999999999999988 6666666777776655  568999999999999999999999


Q ss_pred             HhcCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCc
Q 019722          109 HSLNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDM  186 (336)
Q Consensus       109 ~~~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~  186 (336)
                      .+.++++|+||||||+....  .+.+.++|++++++|+.+++.++++++|.|++++     .++||++||..+..+    
T Consensus        86 ~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-----~g~iv~isS~~~~~~----  156 (256)
T 3ezl_A           86 KAEVGEIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERG-----WGRIINISSVNGQKG----  156 (256)
T ss_dssp             HHHTCCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-----CEEEEEECCCCGGGS----
T ss_pred             HHhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-----CCEEEEEcchhhccC----
Confidence            99999999999999977543  5678899999999999999999999999999876     589999999988776    


Q ss_pred             ccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccch-hHHHHHHHHHHhhc
Q 019722          187 IRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREG-FITDLVFFLTSKLL  265 (336)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~-~~~~~~~~~~~~~~  265 (336)
                                   .++...|++||++++.|+++++.|+++.|  |+||+|+||+++|++.+.... .........+..+.
T Consensus       157 -------------~~~~~~Y~asK~a~~~~~~~la~e~~~~g--i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~  221 (256)
T 3ezl_A          157 -------------QFGQTNYSTAKAGIHGFTMSLAQEVATKG--VTVNTVSPGYIGTDMVKAIRPDVLEKIVATIPVRRL  221 (256)
T ss_dssp             -------------CSCCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCHHHHTSCHHHHHHHHHHSTTSSC
T ss_pred             -------------CCCCcccHHHHHHHHHHHHHHHHHHHHhC--CEEEEEEECcccCccccccCHHHHHHHHhcCCCCCC
Confidence                         66778999999999999999999999988  999999999999999876543 23333334445567


Q ss_pred             CChHHHHHHHHHHHhcCccccCCceeeccCcccc
Q 019722          266 KTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAW  299 (336)
Q Consensus       266 ~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  299 (336)
                      .+|+|+|..++|+++ +...+++|+.+.++|+..
T Consensus       222 ~~~~dva~~~~~l~s-~~~~~~tG~~i~vdgG~~  254 (256)
T 3ezl_A          222 GSPDEIGSIVAWLAS-EESGFSTGADFSLNGGLH  254 (256)
T ss_dssp             BCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTSC
T ss_pred             cCHHHHHHHHHHHhC-CcccCCcCcEEEECCCEe
Confidence            799999999999987 677899999999998754

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=100.00  E-value=3.9e-41  Score=299.19  Aligned_cols=241  Identities=23%  Similarity=0.293  Sum_probs=180.3

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      .++++||++|||||++|||++++++|+++|++|++++|+.+.+++..++++..  +.++.++++|++|+++++++++++.
T Consensus         4 ~~~~~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~   81 (253)
T 3qiv_A            4 SMRFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVAD--GGTAISVAVDVSDPESAKAMADRTL   81 (253)
T ss_dssp             -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             ccccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHH
Confidence            67899999999999999999999999999999999999999999988888765  5689999999999999999999999


Q ss_pred             hcCCCccEEEEcccCCCC-----CCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccC
Q 019722          110 SLNLPLNLLINNAGKFAH-----QHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSG  184 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~~-----~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~  184 (336)
                      +.++++|+||||||+...     ..+.+.++|++++++|+.+++.++++++|.|++++     .++||++||..+.    
T Consensus        82 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-----~g~iv~isS~~~~----  152 (253)
T 3qiv_A           82 AEFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRG-----GGAIVNQSSTAAW----  152 (253)
T ss_dssp             HHHSCCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-----CEEEEEECC--------
T ss_pred             HHcCCCCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-----CCEEEEECCcccc----
Confidence            999999999999998432     24678899999999999999999999999998876     5899999998754    


Q ss_pred             CcccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccc--hhHHHHHHHHHH
Q 019722          185 DMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRERE--GFITDLVFFLTS  262 (336)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~--~~~~~~~~~~~~  262 (336)
                                      +....|++||++++.|+++++.|+++.|  |+||+|+||+++|++.+...  ..........+.
T Consensus       153 ----------------~~~~~Y~asK~a~~~~~~~la~e~~~~g--i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~  214 (253)
T 3qiv_A          153 ----------------LYSNYYGLAKVGINGLTQQLSRELGGRN--IRINAIAPGPIDTEANRTTTPKEMVDDIVKGLPL  214 (253)
T ss_dssp             -----------------------CCHHHHHHHHHHHHHHTTTTT--EEEEEEEC--------------------------
T ss_pred             ----------------CCCchhHHHHHHHHHHHHHHHHHHhhcC--eEEEEEEecCCcccchhhcCcHHHHHHHhccCCC
Confidence                            2345699999999999999999999877  99999999999999877542  223333344555


Q ss_pred             hhcCChHHHHHHHHHHHhcCccccCCceeeccCccccc
Q 019722          263 KLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWT  300 (336)
Q Consensus       263 ~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~  300 (336)
                      .+..+|+|++.+++++++ +...+++|+.|..+|+...
T Consensus       215 ~~~~~~~dva~~~~~l~s-~~~~~~tG~~~~vdgG~~~  251 (253)
T 3qiv_A          215 SRMGTPDDLVGMCLFLLS-DEASWITGQIFNVDGGQII  251 (253)
T ss_dssp             -----CCHHHHHHHHHHS-GGGTTCCSCEEEC------
T ss_pred             CCCCCHHHHHHHHHHHcC-ccccCCCCCEEEECCCeec
Confidence            667789999999999987 6678999999999987543

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=100.00  E-value=3.1e-41  Score=303.08  Aligned_cols=242  Identities=23%  Similarity=0.280  Sum_probs=202.7

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCC-hHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARS-LKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQF  108 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~-~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~  108 (336)
                      .++++||++|||||++|||+++|++|+++|++|++++|+ .+..+...+.++..  +.++.++++|+++++++.++++++
T Consensus        24 ~m~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~  101 (271)
T 4iin_A           24 AMQFTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEK--GYKAAVIKFDAASESDFIEAIQTI  101 (271)
T ss_dssp             CCCCSCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             hcccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc--CCceEEEECCCCCHHHHHHHHHHH
Confidence            578999999999999999999999999999999999994 55555566666554  568999999999999999999999


Q ss_pred             HhcCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCc
Q 019722          109 HSLNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDM  186 (336)
Q Consensus       109 ~~~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~  186 (336)
                      .+.++++|+||||||+....  .+.+.++|++.+++|+.+++.++++++|.|++++     .++||++||..+..+    
T Consensus       102 ~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-----~g~iv~isS~~~~~~----  172 (271)
T 4iin_A          102 VQSDGGLSYLVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSR-----FGSVVNVASIIGERG----  172 (271)
T ss_dssp             HHHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-----CEEEEEECCHHHHHC----
T ss_pred             HHhcCCCCEEEECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcC-----CCEEEEEechhhcCC----
Confidence            99999999999999987654  5678899999999999999999999999998875     589999999888766    


Q ss_pred             ccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHH-HHHHHHHHhhc
Q 019722          187 IRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFIT-DLVFFLTSKLL  265 (336)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~-~~~~~~~~~~~  265 (336)
                                   .++...|++||++++.++++++.|+++.|  |+||+|+||+|.|++.+....... ......+..+.
T Consensus       173 -------------~~~~~~Y~asK~a~~~~~~~la~e~~~~g--i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~  237 (271)
T 4iin_A          173 -------------NMGQTNYSASKGGMIAMSKSFAYEGALRN--IRFNSVTPGFIETDMNANLKDELKADYVKNIPLNRL  237 (271)
T ss_dssp             -------------CTTCHHHHHHHHHHHHHHHHHHHHHHTTT--EEEEEEEECSBCCC------------CGGGCTTCSC
T ss_pred             -------------CCCchHhHHHHHHHHHHHHHHHHHHHHhC--cEEEEEEeCcccCCchhhhcHHHHHHHHhcCCcCCC
Confidence                         66788999999999999999999999887  999999999999999876532211 11122334456


Q ss_pred             CChHHHHHHHHHHHhcCccccCCceeeccCccc
Q 019722          266 KTIPQGAATTCYVAIHPRLVNVSGKYFADCNEA  298 (336)
Q Consensus       266 ~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  298 (336)
                      .+|+|+|.+++++++ +...+++|+.+.++|+.
T Consensus       238 ~~p~dvA~~i~~l~s-~~~~~itG~~i~vdGG~  269 (271)
T 4iin_A          238 GSAKEVAEAVAFLLS-DHSSYITGETLKVNGGL  269 (271)
T ss_dssp             BCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTS
T ss_pred             cCHHHHHHHHHHHhC-CCcCCCcCCEEEeCCCe
Confidence            789999999999997 66789999999999874

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=100.00  E-value=7.2e-41  Score=299.98  Aligned_cols=252  Identities=22%  Similarity=0.266  Sum_probs=208.8

Q ss_pred             CCccccccCCCCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEE-eeCChHHHHHHHHHHHhhCCCCceEEEeccCCCH
Q 019722           20 KSTAEQVTDGCPNLSSVTAIITGATSGIGAETARVLAKRGARLVL-PARSLKAAEEAKARLASDCPGSDIVVLPLDLSSL   98 (336)
Q Consensus        20 ~~~~~~~~~~~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~-~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~   98 (336)
                      .+..+.+.. .+++.+|++|||||++|||++++++|+++|++|++ ..|+.+..++..+++.+.  +.++.++++|++++
T Consensus        12 ~~~~~n~~~-~~~l~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~   88 (267)
T 4iiu_A           12 DLGTENLYF-QSNAMSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVAN--GGNGRLLSFDVANR   88 (267)
T ss_dssp             --------------CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCCEEEEECCTTCH
T ss_pred             ccCChhhhh-ccccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhc--CCceEEEEecCCCH
Confidence            344445554 66789999999999999999999999999999866 557888888888888776  56899999999999


Q ss_pred             HHHHHHHHHHHhcCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcC
Q 019722           99 SSVRNFVSQFHSLNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSS  176 (336)
Q Consensus        99 ~~v~~~~~~~~~~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS  176 (336)
                      ++++++++++.+.++++|+||||||+....  .+.+.++|++.+++|+.+++.+++++++.|.+...    .++||++||
T Consensus        89 ~~~~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~----~g~iv~isS  164 (267)
T 4iiu_A           89 EQCREVLEHEIAQHGAWYGVVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQ----GGRIITLSS  164 (267)
T ss_dssp             HHHHHHHHHHHHHHCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTS----CEEEEEECC
T ss_pred             HHHHHHHHHHHHHhCCccEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC----CcEEEEEcc
Confidence            999999999999999999999999987643  56788999999999999999999999999874432    589999999


Q ss_pred             CccccccCCcccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHH
Q 019722          177 SIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDL  256 (336)
Q Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~  256 (336)
                      ..+..+                 .++...|++||++++.|+++++.|+++.|  |+||+|+||+|+|++.+.........
T Consensus       165 ~~~~~~-----------------~~~~~~Y~asKaa~~~~~~~la~e~~~~g--i~v~~v~PG~v~t~~~~~~~~~~~~~  225 (267)
T 4iiu_A          165 VSGVMG-----------------NRGQVNYSAAKAGIIGATKALAIELAKRK--ITVNCIAPGLIDTGMIEMEESALKEA  225 (267)
T ss_dssp             HHHHHC-----------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCSTTCCCCHHHHHHH
T ss_pred             hHhccC-----------------CCCCchhHHHHHHHHHHHHHHHHHHhhcC--eEEEEEEEeeecCCcccccHHHHHHH
Confidence            888776                 66778999999999999999999999888  99999999999999988764444444


Q ss_pred             HHHHHHhhcCChHHHHHHHHHHHhcCccccCCceeeccCccc
Q 019722          257 VFFLTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEA  298 (336)
Q Consensus       257 ~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  298 (336)
                      ....+..+...|+|+|..++|+++ +...+++|+.+.++|+.
T Consensus       226 ~~~~p~~~~~~~edva~~~~~L~s-~~~~~itG~~i~vdGG~  266 (267)
T 4iiu_A          226 MSMIPMKRMGQAEEVAGLASYLMS-DIAGYVTRQVISINGGM  266 (267)
T ss_dssp             HHTCTTCSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTC
T ss_pred             HhcCCCCCCcCHHHHHHHHHHHhC-CcccCccCCEEEeCCCc
Confidence            444455567799999999999997 77789999999998863

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=100.00  E-value=8.6e-41  Score=298.33  Aligned_cols=242  Identities=19%  Similarity=0.234  Sum_probs=203.7

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHh
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHS  110 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  110 (336)
                      ++++||++|||||++|||++++++|+++|++|++++|+.+++++..+++....++.++.++++|++|+++++++++++.+
T Consensus         3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   82 (260)
T 2z1n_A            3 LGIQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARD   82 (260)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHH
Confidence            46899999999999999999999999999999999999998888888776543334799999999999999999999999


Q ss_pred             cCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccc
Q 019722          111 LNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIR  188 (336)
Q Consensus       111 ~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~  188 (336)
                      .++ +|+||||||+....  .+.+.++|++.+++|+.+++.++++++|.|++++     .++||++||..+..+      
T Consensus        83 ~~g-id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-----~g~iv~isS~~~~~~------  150 (260)
T 2z1n_A           83 LGG-ADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKG-----WGRMVYIGSVTLLRP------  150 (260)
T ss_dssp             TTC-CSEEEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHT-----CEEEEEECCGGGTSC------
T ss_pred             hcC-CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-----CcEEEEECchhhcCC------
Confidence            998 99999999976442  5678899999999999999999999999998765     489999999887665      


Q ss_pred             ccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCc----------cchh--HHHH
Q 019722          189 YLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRE----------REGF--ITDL  256 (336)
Q Consensus       189 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~----------~~~~--~~~~  256 (336)
                                 .+....|++||++++.+++.++.|+++.|  |+||+|+||++.|++.+.          ....  ....
T Consensus       151 -----------~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~  217 (260)
T 2z1n_A          151 -----------WQDLALSNIMRLPVIGVVRTLALELAPHG--VTVNAVLPSLILTDRVRSLAEERARRSGITVEEALKSM  217 (260)
T ss_dssp             -----------CTTBHHHHHHTHHHHHHHHHHHHHHGGGT--EEEEEEEECHHHHCCCC---------------------
T ss_pred             -----------CCCCchhHHHHHHHHHHHHHHHHHHhhhC--eEEEEEEECCcccchhhhhhhhhhcccCCcHHHHHHHH
Confidence                       56678999999999999999999999888  999999999999999762          1111  1111


Q ss_pred             HHHHHHhhcCChHHHHHHHHHHHhcCccccCCceeeccCccc
Q 019722          257 VFFLTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEA  298 (336)
Q Consensus       257 ~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  298 (336)
                      ....+..+..+|+|+|..++|+++ +...+++|+.+.++|+.
T Consensus       218 ~~~~p~~r~~~~~dva~~v~~l~s-~~~~~~tG~~i~vdGG~  258 (260)
T 2z1n_A          218 ASRIPMGRVGKPEELASVVAFLAS-EKASFITGAVIPVDGGA  258 (260)
T ss_dssp             --CCTTSSCCCHHHHHHHHHHHTS-GGGTTCCSCEEEESTTT
T ss_pred             HhcCCCCCccCHHHHHHHHHHHhC-ccccCCCCCEEEeCCCc
Confidence            111233456689999999999987 66789999999998874

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=100.00  E-value=4.4e-41  Score=295.91  Aligned_cols=229  Identities=18%  Similarity=0.178  Sum_probs=193.8

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcC
Q 019722           33 LSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLN  112 (336)
Q Consensus        33 l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  112 (336)
                      |++|++|||||++|||++++++|+++|++|++++|+.+++++..+++     +.++.++++|++++++++++++++.+.+
T Consensus         1 Ms~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~v~~~~~~~~~~~   75 (235)
T 3l6e_A            1 MSLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLL-----GNAVIGIVADLAHHEDVDVAFAAAVEWG   75 (235)
T ss_dssp             --CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----GGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-----cCCceEEECCCCCHHHHHHHHHHHHHhc
Confidence            46899999999999999999999999999999999999888877776     2369999999999999999999999999


Q ss_pred             CCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccccc
Q 019722          113 LPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYL  190 (336)
Q Consensus       113 ~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~  190 (336)
                      +++|+||||||+....  .+.+.++|++++++|+.|++.++++++|.|++++      ++||++||..+..+        
T Consensus        76 g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~------~~iv~isS~~~~~~--------  141 (235)
T 3l6e_A           76 GLPELVLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERG------GVLANVLSSAAQVG--------  141 (235)
T ss_dssp             CSCSEEEEECCCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC------EEEEEECCEECCSS--------
T ss_pred             CCCcEEEECCCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC------CEEEEEeCHHhcCC--------
Confidence            9999999999986543  5678899999999999999999999999997753      69999999888776        


Q ss_pred             ccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHHHHHHHHhhcCChHH
Q 019722          191 GQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSKLLKTIPQ  270 (336)
Q Consensus       191 ~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~  270 (336)
                               .+....|++||+++++|+++++.|+++.|  |+||+|+||+|+|++......        ....+..+|+|
T Consensus       142 ---------~~~~~~Y~asKaa~~~~~~~la~e~~~~g--i~v~~v~PG~v~T~~~~~~~~--------~~~~~~~~ped  202 (235)
T 3l6e_A          142 ---------KANESLYCASKWGMRGFLESLRAELKDSP--LRLVNLYPSGIRSEFWDNTDH--------VDPSGFMTPED  202 (235)
T ss_dssp             ---------CSSHHHHHHHHHHHHHHHHHHHHHTTTSS--EEEEEEEEEEECCCC-------------------CBCHHH
T ss_pred             ---------CCCCcHHHHHHHHHHHHHHHHHHHhhccC--CEEEEEeCCCccCcchhccCC--------CCCcCCCCHHH
Confidence                     67788999999999999999999999888  999999999999999776322        12336789999


Q ss_pred             HHHHHHHHHhcCccccCCceeeccCcccc
Q 019722          271 GAATTCYVAIHPRLVNVSGKYFADCNEAW  299 (336)
Q Consensus       271 ~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  299 (336)
                      +|..++++++++...+++|-.+......+
T Consensus       203 vA~~v~~l~~~~~~~~i~~i~~~~~~~~~  231 (235)
T 3l6e_A          203 AAAYMLDALEARSSCHVTDLFIGRNEGHH  231 (235)
T ss_dssp             HHHHHHHHTCCCSSEEEEEEEEEECCC--
T ss_pred             HHHHHHHHHhCCCCcceeeEEEecCCCCc
Confidence            99999999998888899998886665544

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=100.00  E-value=6.7e-41  Score=299.04  Aligned_cols=241  Identities=27%  Similarity=0.264  Sum_probs=199.6

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHH-HHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhc
Q 019722           33 LSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKA-AEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSL  111 (336)
Q Consensus        33 l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~-~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  111 (336)
                      |+||++|||||++|||++++++|+++|++|++++|+.+. +++..+++.... +.++.++++|++|+++++++++++.+.
T Consensus         2 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~   80 (260)
T 1x1t_A            2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQH-GVKVLYDGADLSKGEAVRGLVDNAVRQ   80 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHH-TSCEEEECCCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhcc-CCcEEEEECCCCCHHHHHHHHHHHHHh
Confidence            689999999999999999999999999999999999887 777777775532 347899999999999999999999999


Q ss_pred             CCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcccc
Q 019722          112 NLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRY  189 (336)
Q Consensus       112 ~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~  189 (336)
                      ++++|+||||||+....  .+.+.++|++++++|+.+++.++++++|.|++++     .++||++||..+..+       
T Consensus        81 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-----~g~iv~isS~~~~~~-------  148 (260)
T 1x1t_A           81 MGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQG-----FGRIINIASAHGLVA-------  148 (260)
T ss_dssp             HSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-----CEEEEEECCGGGTSC-------
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-----CCEEEEECcHHhCcC-------
Confidence            99999999999976532  5678899999999999999999999999998765     489999999887765       


Q ss_pred             cccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccch------------hHHHH-
Q 019722          190 LGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREG------------FITDL-  256 (336)
Q Consensus       190 ~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~------------~~~~~-  256 (336)
                                .++...|++||++++.|+++++.|+++.|  |+||+|+||+++|++.+....            ..... 
T Consensus       149 ----------~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (260)
T 1x1t_A          149 ----------SANKSAYVAAKHGVVGFTKVTALETAGQG--ITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELL  216 (260)
T ss_dssp             ----------CTTCHHHHHHHHHHHHHHHHHHHHHTTTT--EEEEEEEECCBCC------------------------CH
T ss_pred             ----------CCCCchHHHHHHHHHHHHHHHHHHhccCC--EEEEEEeecCccCchHHHhhhhhccccCCchHHHHHHHh
Confidence                      56678899999999999999999999887  999999999999998765311            00111 


Q ss_pred             HHHHHHhhcCChHHHHHHHHHHHhcCccccCCceeeccCcccc
Q 019722          257 VFFLTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAW  299 (336)
Q Consensus       257 ~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  299 (336)
                      ....+..+..+|+|+|..++|+++ +.+.+++|+.+.++|+..
T Consensus       217 ~~~~p~~~~~~p~dva~~~~~l~s-~~~~~~tG~~~~vdgG~~  258 (260)
T 1x1t_A          217 SEKQPSLQFVTPEQLGGTAVFLAS-DAAAQITGTTVSVDGGWT  258 (260)
T ss_dssp             HHHCTTCCCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTGG
T ss_pred             hccCCCCCCcCHHHHHHHHHHHhC-hhhcCCCCCEEEECCCcc
Confidence            112233456789999999999997 667899999999988743

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.5e-40  Score=295.91  Aligned_cols=233  Identities=22%  Similarity=0.247  Sum_probs=198.1

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHCC--CEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcC
Q 019722           35 SVTAIITGATSGIGAETARVLAKRG--ARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLN  112 (336)
Q Consensus        35 gk~~lItGgs~gIG~aia~~L~~~G--~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  112 (336)
                      ||++|||||++|||++++++|+++|  ++|++++|+.+.++++.+++     +.++.++++|++|+++++++++++.+.+
T Consensus         2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   76 (254)
T 3kzv_A            2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKY-----GDRFFYVVGDITEDSVLKQLVNAAVKGH   76 (254)
T ss_dssp             CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHH-----GGGEEEEESCTTSHHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHh-----CCceEEEECCCCCHHHHHHHHHHHHHhc
Confidence            6999999999999999999999985  68999999998888776665     4589999999999999999999999999


Q ss_pred             CCccEEEEcccCCCC---CCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcccc
Q 019722          113 LPLNLLINNAGKFAH---QHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRY  189 (336)
Q Consensus       113 ~~id~lv~nAg~~~~---~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~  189 (336)
                      +++|+||||||+...   ..+.+.++|++++++|+.+++.++++++|.|++++      |+||++||..+..+       
T Consensus        77 g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~------g~iv~isS~~~~~~-------  143 (254)
T 3kzv_A           77 GKIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTN------GNVVFVSSDACNMY-------  143 (254)
T ss_dssp             SCCCEEEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT------CEEEEECCSCCCCS-------
T ss_pred             CCccEEEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC------CeEEEEcCchhccC-------
Confidence            999999999998543   26778899999999999999999999999998763      89999999988765       


Q ss_pred             cccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccc----------hhHHHHHHH
Q 019722          190 LGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRERE----------GFITDLVFF  259 (336)
Q Consensus       190 ~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~----------~~~~~~~~~  259 (336)
                                .++...|++||++++.|+++++.|+  .+  ||||+|+||+++|++.+...          .........
T Consensus       144 ----------~~~~~~Y~asK~a~~~~~~~la~e~--~~--i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~  209 (254)
T 3kzv_A          144 ----------FSSWGAYGSSKAALNHFAMTLANEE--RQ--VKAIAVAPGIVDTDMQVNIRENVGPSSMSAEQLKMFRGL  209 (254)
T ss_dssp             ----------SCCSHHHHHHHHHHHHHHHHHHHHC--TT--SEEEEEECSSCCCCCSCCCCCCCCTTTSCHHHHHHHHHH
T ss_pred             ----------CCCcchHHHHHHHHHHHHHHHHhhc--cC--cEEEEEeCCcccchhHHHhhcccCccccCHHHHHHHHHH
Confidence                      6677899999999999999999997  45  99999999999999987642          122233334


Q ss_pred             HHHhhcCChHHHHHHHHHHHhcCccccCCceeeccCcccc
Q 019722          260 LTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAW  299 (336)
Q Consensus       260 ~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  299 (336)
                      .+..+..+|+|+|.+++|+++.+.+.+++|+++.++|+..
T Consensus       210 ~~~~r~~~p~dva~~v~~L~s~~~~~~itG~~i~vdg~~~  249 (254)
T 3kzv_A          210 KENNQLLDSSVPATVYAKLALHGIPDGVNGQYLSYNDPAL  249 (254)
T ss_dssp             HTTC----CHHHHHHHHHHHHHCCCGGGTTCEEETTCGGG
T ss_pred             HhcCCcCCcccHHHHHHHHHhhcccCCCCccEEEecCccc
Confidence            4556678999999999999984435899999999998754

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=100.00  E-value=1.4e-41  Score=308.85  Aligned_cols=241  Identities=24%  Similarity=0.260  Sum_probs=204.0

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCCh--HHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSL--KAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQ  107 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~--~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~  107 (336)
                      +++|+||++|||||++|||++++++|+++|++|++++|+.  ...++..+.++..  +.++.++++|++|++++++++++
T Consensus        44 ~~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~  121 (294)
T 3r3s_A           44 SGRLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEEC--GRKAVLLPGDLSDESFARSLVHK  121 (294)
T ss_dssp             CSTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHT--TCCEEECCCCTTSHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHc--CCcEEEEEecCCCHHHHHHHHHH
Confidence            5678999999999999999999999999999999999873  3455555555443  56899999999999999999999


Q ss_pred             HHhcCCCccEEEEcccCCCC---CCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccC
Q 019722          108 FHSLNLPLNLLINNAGKFAH---QHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSG  184 (336)
Q Consensus       108 ~~~~~~~id~lv~nAg~~~~---~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~  184 (336)
                      +.+.++++|+||||||+...   ..+.+.++|++++++|+.|++.++++++|.|++       .|+||++||..+..+  
T Consensus       122 ~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~-------~g~Iv~isS~~~~~~--  192 (294)
T 3r3s_A          122 AREALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPK-------GASIITTSSIQAYQP--  192 (294)
T ss_dssp             HHHHHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCT-------TCEEEEECCGGGTSC--
T ss_pred             HHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhc-------CCEEEEECChhhccC--
Confidence            99999999999999997542   257788999999999999999999999999854       379999999988765  


Q ss_pred             CcccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCcc---chhHHHHHHHHH
Q 019722          185 DMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRER---EGFITDLVFFLT  261 (336)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~---~~~~~~~~~~~~  261 (336)
                                     .+....|++||++++.|+++++.|+++.|  |+||+|+||+|+|++....   ...........+
T Consensus       193 ---------------~~~~~~Y~asKaa~~~l~~~la~e~~~~g--I~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p  255 (294)
T 3r3s_A          193 ---------------SPHLLDYAATKAAILNYSRGLAKQVAEKG--IRVNIVAPGPIWTALQISGGQTQDKIPQFGQQTP  255 (294)
T ss_dssp             ---------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECSBCSHHHHTTTSCGGGSTTTTTTST
T ss_pred             ---------------CCCchHHHHHHHHHHHHHHHHHHHHhhcC--eEEEEEecCcCccccccccCCCHHHHHHHHhcCC
Confidence                           66788999999999999999999999988  9999999999999983221   111222222344


Q ss_pred             HhhcCChHHHHHHHHHHHhcCccccCCceeeccCcccc
Q 019722          262 SKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAW  299 (336)
Q Consensus       262 ~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  299 (336)
                      ..+...|+|+|.+++|+++ +.+.++||+.+.++|+..
T Consensus       256 ~~r~~~p~dvA~~v~~L~s-~~~~~itG~~i~vdGG~~  292 (294)
T 3r3s_A          256 MKRAGQPAELAPVYVYLAS-QESSYVTAEVHGVCGGEH  292 (294)
T ss_dssp             TSSCBCGGGGHHHHHHHHS-GGGTTCCSCEEEESTTCC
T ss_pred             CCCCcCHHHHHHHHHHHhC-ccccCCCCCEEEECCCcc
Confidence            5667899999999999987 778999999999998854

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=100.00  E-value=5.4e-41  Score=302.91  Aligned_cols=258  Identities=14%  Similarity=0.115  Sum_probs=206.3

Q ss_pred             CCCCCCCCccccccCCCCCCCCCEEEEeCCC--ChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEE
Q 019722           14 ASGYGSKSTAEQVTDGCPNLSSVTAIITGAT--SGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVL   91 (336)
Q Consensus        14 ~~~~~~~~~~~~~~~~~~~l~gk~~lItGgs--~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~   91 (336)
                      +++..+..+.+.-..+|.+++||++|||||+  +|||+++|++|+++|++|++++|+.  ..+..+++.+..  .++.++
T Consensus         5 ~~~~~~~~~~~~~~~~M~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~--~~~~~~~l~~~~--~~~~~~   80 (280)
T 3nrc_A            5 HHHHHHSSGLVPRGSHMGFLAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQ--FKDRVEKLCAEF--NPAAVL   80 (280)
T ss_dssp             -----------------CTTTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTT--CHHHHHHHHGGG--CCSEEE
T ss_pred             cccccccCCCCCCCCcccccCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCch--HHHHHHHHHHhc--CCceEE
Confidence            4556666677777777999999999999988  7899999999999999999999997  344555665553  358999


Q ss_pred             eccCCCHHHHHHHHHHHHhcCCCccEEEEcccCCCCC------CC-CCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhcc
Q 019722           92 PLDLSSLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQ------HA-ISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKA  164 (336)
Q Consensus        92 ~~Dl~~~~~v~~~~~~~~~~~~~id~lv~nAg~~~~~------~~-~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~  164 (336)
                      ++|++++++++++++++.+.++++|+||||||+....      .+ .+.++|++++++|+.+++.++++++|.|+++   
T Consensus        81 ~~Dl~~~~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~---  157 (280)
T 3nrc_A           81 PCDVISDQEIKDLFVELGKVWDGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNR---  157 (280)
T ss_dssp             ECCTTCHHHHHHHHHHHHHHCSSCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT---
T ss_pred             EeecCCHHHHHHHHHHHHHHcCCCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcC---
Confidence            9999999999999999999999999999999986531      22 7889999999999999999999999999765   


Q ss_pred             CCCCCeEEEEcCCccccccCCcccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCC
Q 019722          165 TGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTR  244 (336)
Q Consensus       165 ~~~~grIV~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~  244 (336)
                         .++||++||.++..+                 .+....|++||++++.|+++++.|+++.|  |+||+|+||+|+|+
T Consensus       158 ---~g~iv~isS~~~~~~-----------------~~~~~~Y~asKaal~~~~~~la~e~~~~g--i~v~~v~PG~v~T~  215 (280)
T 3nrc_A          158 ---NASMVALTYIGAEKA-----------------MPSYNTMGVAKASLEATVRYTALALGEDG--IKVNAVSAGPIKTL  215 (280)
T ss_dssp             ---TCEEEEEECGGGTSC-----------------CTTTHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECCCCCS
T ss_pred             ---CCeEEEEeccccccC-----------------CCCchhhHHHHHHHHHHHHHHHHHHHHcC--cEEEEEeeccccch
Confidence               389999999988766                 67788999999999999999999999988  99999999999999


Q ss_pred             CCCccchh---HHHHHHHHHHhhcCChHHHHHHHHHHHhcCccccCCceeeccCcccccc
Q 019722          245 LTREREGF---ITDLVFFLTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWTS  301 (336)
Q Consensus       245 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~~  301 (336)
                      +.+.....   ........+..+..+|+|+|..++|+++ +...+++|+.+.++|+....
T Consensus       216 ~~~~~~~~~~~~~~~~~~~p~~~~~~pedvA~~v~~l~s-~~~~~~tG~~i~vdgG~~~~  274 (280)
T 3nrc_A          216 AASGISNFKKMLDYNAMVSPLKKNVDIMEVGNTVAFLCS-DMATGITGEVVHVDAGYHCV  274 (280)
T ss_dssp             GGGGCTTHHHHHHHHHHHSTTCSCCCHHHHHHHHHHTTS-GGGTTCCSCEEEESTTGGGC
T ss_pred             hhhcCcchHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhC-cccCCcCCcEEEECCCcccc
Confidence            98775422   2222223334556799999999999987 77789999999999986544

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=100.00  E-value=3.5e-41  Score=302.40  Aligned_cols=233  Identities=21%  Similarity=0.229  Sum_probs=198.3

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      ..+++||++|||||++|||++++++|+++|++|++++|+.+..            ...+..+++|++++++++++++++.
T Consensus         9 ~~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~------------~~~~~~~~~Dv~~~~~v~~~~~~~~   76 (269)
T 3vtz_A            9 MEEFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSD------------VNVSDHFKIDVTNEEEVKEAVEKTT   76 (269)
T ss_dssp             -CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--C------------TTSSEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhc------------cCceeEEEecCCCHHHHHHHHHHHH
Confidence            6789999999999999999999999999999999999987543            1267789999999999999999999


Q ss_pred             hcCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcc
Q 019722          110 SLNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMI  187 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~  187 (336)
                      +.++++|+||||||+....  .+.+.++|++++++|+.+++.++++++|.|++++     .|+||++||..+..+     
T Consensus        77 ~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-----~g~iv~isS~~~~~~-----  146 (269)
T 3vtz_A           77 KKYGRIDILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIG-----HGSIINIASVQSYAA-----  146 (269)
T ss_dssp             HHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-----CEEEEEECCGGGTSB-----
T ss_pred             HHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-----CCEEEEECchhhccC-----
Confidence            9999999999999976543  5678899999999999999999999999998876     589999999988765     


Q ss_pred             cccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccc------------hhHHH
Q 019722          188 RYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRERE------------GFITD  255 (336)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~------------~~~~~  255 (336)
                                  .+....|++||++++.|+++++.|+++ +  |+||+|+||+|+|++.....            .....
T Consensus       147 ------------~~~~~~Y~asKaa~~~l~~~la~e~~~-~--i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~  211 (269)
T 3vtz_A          147 ------------TKNAAAYVTSKHALLGLTRSVAIDYAP-K--IRCNAVCPGTIMTPMVIKAAKMEVGEDENAVERKIEE  211 (269)
T ss_dssp             ------------CTTCHHHHHHHHHHHHHHHHHHHHHTT-T--EEEEEEEECSBCCHHHHHHHHHHHCCSTTHHHHHHHH
T ss_pred             ------------CCCChhHHHHHHHHHHHHHHHHHHhcC-C--CEEEEEEECCCcCcchhhhhhccccccchhhHHHHHH
Confidence                        667789999999999999999999987 6  99999999999999865421            11112


Q ss_pred             HHHHHHHhhcCChHHHHHHHHHHHhcCccccCCceeeccCccccc
Q 019722          256 LVFFLTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWT  300 (336)
Q Consensus       256 ~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~  300 (336)
                      .....+..+..+|+|+|.+++|+++ +.+.+++|+.+.++|+...
T Consensus       212 ~~~~~p~~r~~~pedvA~~v~~L~s-~~~~~itG~~i~vdGG~~~  255 (269)
T 3vtz_A          212 WGRQHPMGRIGRPEEVAEVVAFLAS-DRSSFITGACLTVDGGLLS  255 (269)
T ss_dssp             HHHHSTTSSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTGGG
T ss_pred             HHhcCCCCCCcCHHHHHHHHHHHhC-CccCCCcCcEEEECCCccc
Confidence            2223344556789999999999997 6778999999999998543

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=100.00  E-value=1.9e-41  Score=307.56  Aligned_cols=242  Identities=24%  Similarity=0.264  Sum_probs=203.7

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHH-HHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEE-AKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQF  108 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~-~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~  108 (336)
                      ..+|+||++|||||++|||++++++|+++|++|++++|+.+...+ ..+.++..  +.++.++++|++|+++++++++++
T Consensus        42 ~~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~  119 (291)
T 3ijr_A           42 SEKLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKE--GVKCVLLPGDLSDEQHCKDIVQET  119 (291)
T ss_dssp             CSTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTT--TCCEEEEESCTTSHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHHHHHHHH
Confidence            456899999999999999999999999999999999998765443 33444333  568999999999999999999999


Q ss_pred             HhcCCCccEEEEcccCCCC---CCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCC
Q 019722          109 HSLNLPLNLLINNAGKFAH---QHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGD  185 (336)
Q Consensus       109 ~~~~~~id~lv~nAg~~~~---~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~  185 (336)
                      .+.++++|+||||||....   ..+.+.++|++++++|+.+++.++++++|.|++       .++||++||..+..+   
T Consensus       120 ~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~-------~g~iv~isS~~~~~~---  189 (291)
T 3ijr_A          120 VRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQ-------GDVIINTASIVAYEG---  189 (291)
T ss_dssp             HHHHSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCT-------TCEEEEECCTHHHHC---
T ss_pred             HHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhh-------CCEEEEEechHhcCC---
Confidence            9999999999999997643   256788999999999999999999999999854       379999999988766   


Q ss_pred             cccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccch--hHHHHHHHHHHh
Q 019722          186 MIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREG--FITDLVFFLTSK  263 (336)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~--~~~~~~~~~~~~  263 (336)
                                    .+....|++||++++.|+++++.|+++.|  |+||+|+||+|+|++......  .........+..
T Consensus       190 --------------~~~~~~Y~asKaa~~~l~~~la~e~~~~g--i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~p~~  253 (291)
T 3ijr_A          190 --------------NETLIDYSATKGAIVAFTRSLSQSLVQKG--IRVNGVAPGPIWTPLIPSSFDEKKVSQFGSNVPMQ  253 (291)
T ss_dssp             --------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECSBCSTHHHHHSCHHHHHHTTTTSTTS
T ss_pred             --------------CCCChhHHHHHHHHHHHHHHHHHHHhhcC--EEEEEEeeCCCcCCcccccCCHHHHHHHHccCCCC
Confidence                          66778999999999999999999999988  999999999999998654211  111111223345


Q ss_pred             hcCChHHHHHHHHHHHhcCccccCCceeeccCccccc
Q 019722          264 LLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWT  300 (336)
Q Consensus       264 ~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~  300 (336)
                      +...|+|+|.+++|+++ +.+.+++|+.+.++|+...
T Consensus       254 r~~~p~dvA~~v~~L~s-~~~~~itG~~i~vdGG~~~  289 (291)
T 3ijr_A          254 RPGQPYELAPAYVYLAS-SDSSYVTGQMIHVNGGVIV  289 (291)
T ss_dssp             SCBCGGGTHHHHHHHHS-GGGTTCCSCEEEESSSCCC
T ss_pred             CCcCHHHHHHHHHHHhC-CccCCCcCCEEEECCCccc
Confidence            56789999999999997 7778999999999988543

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=100.00  E-value=2.6e-40  Score=295.19  Aligned_cols=243  Identities=21%  Similarity=0.248  Sum_probs=207.1

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      ..+|+||++|||||++|||++++++|+++|++|++++|+.+++++..++++..  +.++.++.+|++++++++++++++.
T Consensus         9 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~   86 (260)
T 2zat_A            9 RKPLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGE--GLSVTGTVCHVGKAEDRERLVAMAV   86 (260)
T ss_dssp             -CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEEccCCCHHHHHHHHHHHH
Confidence            45689999999999999999999999999999999999998888888877655  5679999999999999999999999


Q ss_pred             hcCCCccEEEEcccCCCC---CCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCc
Q 019722          110 SLNLPLNLLINNAGKFAH---QHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDM  186 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~~---~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~  186 (336)
                      +.++++|+||||||+...   ..+.+.++|++++++|+.+++.++++++|.|++++     .++||++||..+..+    
T Consensus        87 ~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-----~g~iv~isS~~~~~~----  157 (260)
T 2zat_A           87 NLHGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRG-----GGSVLIVSSVGAYHP----  157 (260)
T ss_dssp             HHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-----CEEEEEECCGGGTSC----
T ss_pred             HHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-----CCEEEEEechhhcCC----
Confidence            999999999999997532   25678899999999999999999999999998764     489999999887655    


Q ss_pred             ccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccc--h-hHHHHHHHHHHh
Q 019722          187 IRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRERE--G-FITDLVFFLTSK  263 (336)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~--~-~~~~~~~~~~~~  263 (336)
                                   .++...|++||++++.|+++++.|+++.|  |+||+|+||++.|++.+...  . .........+..
T Consensus       158 -------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~  222 (260)
T 2zat_A          158 -------------FPNLGPYNVSKTALLGLTKNLAVELAPRN--IRVNCLAPGLIKTNFSQVLWMDKARKEYMKESLRIR  222 (260)
T ss_dssp             -------------CTTBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCSSTTHHHHSSHHHHHHHHHHHTCS
T ss_pred             -------------CCCchhHHHHHHHHHHHHHHHHHHhcccC--eEEEEEEECcccCccchhcccChHHHHHHHhcCCCC
Confidence                         56778999999999999999999999888  99999999999999865421  1 111122223344


Q ss_pred             hcCChHHHHHHHHHHHhcCccccCCceeeccCcccc
Q 019722          264 LLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAW  299 (336)
Q Consensus       264 ~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  299 (336)
                      +...|+|+|..++|+++ +.+.+++|+.+.++|+..
T Consensus       223 ~~~~~~dva~~v~~l~s-~~~~~~tG~~~~vdgG~~  257 (260)
T 2zat_A          223 RLGNPEDCAGIVSFLCS-EDASYITGETVVVGGGTA  257 (260)
T ss_dssp             SCBCGGGGHHHHHHHTS-GGGTTCCSCEEEESTTCC
T ss_pred             CCCCHHHHHHHHHHHcC-cccCCccCCEEEECCCcc
Confidence            56789999999999987 667889999999998754

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=100.00  E-value=6.5e-41  Score=300.65  Aligned_cols=240  Identities=22%  Similarity=0.213  Sum_probs=203.6

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEee-CChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhc
Q 019722           33 LSSVTAIITGATSGIGAETARVLAKRGARLVLPA-RSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSL  111 (336)
Q Consensus        33 l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~-r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  111 (336)
                      +++|++|||||++|||++++++|+++|++|++++ |+.+..++..+++...  +.++.++++|++|+++++++++++.+.
T Consensus        23 ~~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~  100 (269)
T 3gk3_A           23 QAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDA--GRDFKAYAVDVADFESCERCAEKVLAD  100 (269)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTT--TCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             hcCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHHHHH
Confidence            7899999999999999999999999999999998 6666666666666543  578999999999999999999999999


Q ss_pred             CCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcccc
Q 019722          112 NLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRY  189 (336)
Q Consensus       112 ~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~  189 (336)
                      ++++|+||||||+....  .+.+.++|++++++|+.+++.++++++|.|++++     .|+||++||..+..+       
T Consensus       101 ~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-----~g~iv~isS~~~~~~-------  168 (269)
T 3gk3_A          101 FGKVDVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERR-----FGRIVNIGSVNGSRG-------  168 (269)
T ss_dssp             HSCCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-----CEEEEEECCHHHHHC-------
T ss_pred             cCCCCEEEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-----CCEEEEeCChhhccC-------
Confidence            99999999999977543  5678899999999999999999999999998875     589999999888766       


Q ss_pred             cccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHH--HHHHHHHHhhcCC
Q 019722          190 LGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFIT--DLVFFLTSKLLKT  267 (336)
Q Consensus       190 ~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~--~~~~~~~~~~~~~  267 (336)
                                .++...|++||++++.|+++++.++++.|  |+||+|+||+|+|++.+.......  ......+..+..+
T Consensus       169 ----------~~~~~~Y~asKaa~~~~~~~la~e~~~~g--i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (269)
T 3gk3_A          169 ----------AFGQANYASAKAGIHGFTKTLALETAKRG--ITVNTVSPGYLATAMVEAVPQDVLEAKILPQIPVGRLGR  236 (269)
T ss_dssp             ----------CTTBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCTTTTC-------CCSGGGCTTSSCBC
T ss_pred             ----------CCCcchHHHHHHHHHHHHHHHHHHhhhcC--CEEEEEecCcccchhhhhhchhHHHHHhhhcCCcCCccC
Confidence                      66788999999999999999999999988  999999999999999876532111  1112223345568


Q ss_pred             hHHHHHHHHHHHhcCccccCCceeeccCcccc
Q 019722          268 IPQGAATTCYVAIHPRLVNVSGKYFADCNEAW  299 (336)
Q Consensus       268 ~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  299 (336)
                      |+|+|..++|+++ +...+++|+.+.++|+..
T Consensus       237 p~dvA~~v~~L~s-~~~~~itG~~i~vdgG~~  267 (269)
T 3gk3_A          237 PDEVAALIAFLCS-DDAGFVTGADLAINGGMH  267 (269)
T ss_dssp             HHHHHHHHHHHTS-TTCTTCCSCEEEESTTSC
T ss_pred             HHHHHHHHHHHhC-CCcCCeeCcEEEECCCEe
Confidence            9999999999987 677899999999998754

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=100.00  E-value=2.4e-41  Score=304.25  Aligned_cols=234  Identities=22%  Similarity=0.259  Sum_probs=195.9

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHH-------HHHHHHHHHhhCCCCceEEEeccCCCHHHHHH
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKA-------AEEAKARLASDCPGSDIVVLPLDLSSLSSVRN  103 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~-------~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~  103 (336)
                      ++++||++|||||++|||+++|++|+++|++|++++|+.++       +++..+++...  +.++.++++|+++++++++
T Consensus         2 ~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~   79 (274)
T 3e03_A            2 LTLSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAA--GGQGLALKCDIREEDQVRA   79 (274)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHH--TSEEEEEECCTTCHHHHHH
T ss_pred             CCCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhc--CCeEEEEeCCCCCHHHHHH
Confidence            67999999999999999999999999999999999998753       55566666555  6789999999999999999


Q ss_pred             HHHHHHhcCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCcccc
Q 019722          104 FVSQFHSLNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSW  181 (336)
Q Consensus       104 ~~~~~~~~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~  181 (336)
                      +++++.+.++++|+||||||+....  .+.+.++|++++++|+.+++.++|+++|.|++++     .|+||++||..+..
T Consensus        80 ~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-----~g~iv~isS~~~~~  154 (274)
T 3e03_A           80 AVAATVDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAP-----NPHILTLAPPPSLN  154 (274)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSS-----SCEEEECCCCCCCC
T ss_pred             HHHHHHHHcCCCCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcC-----CceEEEECChHhcC
Confidence            9999999999999999999986543  5678899999999999999999999999998765     58999999987664


Q ss_pred             ccCCcccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCC-ceeCCCCCccchhHHHHHHHH
Q 019722          182 FSGDMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPG-IVRTRLTREREGFITDLVFFL  260 (336)
Q Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG-~v~T~~~~~~~~~~~~~~~~~  260 (336)
                      +..               .++...|++||++++.|+++++.|+++.|  |+||+|+|| ++.|++.+....        .
T Consensus       155 ~~~---------------~~~~~~Y~asKaal~~l~~~la~e~~~~g--I~vn~v~PG~~v~T~~~~~~~~--------~  209 (274)
T 3e03_A          155 PAW---------------WGAHTGYTLAKMGMSLVTLGLAAEFGPQG--VAINALWPRTVIATDAINMLPG--------V  209 (274)
T ss_dssp             HHH---------------HHHCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEECSBCBCC-------C--------C
T ss_pred             CCC---------------CCCCchHHHHHHHHHHHHHHHHHHhhhcC--EEEEEEECCcccccchhhhccc--------c
Confidence            310               24567899999999999999999999988  999999999 689998744221        1


Q ss_pred             HHhhcCChHHHHHHHHHHHhcCccccCCceeeccCcc
Q 019722          261 TSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNE  297 (336)
Q Consensus       261 ~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~  297 (336)
                      ......+|+|+|..++|+++ +.+.++||+++.++|.
T Consensus       210 ~~~~~~~pedvA~~v~~l~s-~~~~~itG~~i~~~g~  245 (274)
T 3e03_A          210 DAAACRRPEIMADAAHAVLT-REAAGFHGQFLIDDEV  245 (274)
T ss_dssp             CGGGSBCTHHHHHHHHHHHT-SCCTTCCSCEEEHHHH
T ss_pred             cccccCCHHHHHHHHHHHhC-ccccccCCeEEEcCcc
Confidence            12346789999999999997 7779999999955553

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=100.00  E-value=1.2e-40  Score=300.27  Aligned_cols=242  Identities=28%  Similarity=0.325  Sum_probs=206.2

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      |+++++|++|||||++|||++++++|+++|++|++++|+.+++++..++++..  +.++.++++|++++++++++++++.
T Consensus        17 m~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~   94 (277)
T 2rhc_B           17 MATQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREA--GVEADGRTCDVRSVPEIEALVAAVV   94 (277)
T ss_dssp             TCCTTSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             cccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEECCCCCHHHHHHHHHHHH
Confidence            55799999999999999999999999999999999999999888888887664  4679999999999999999999999


Q ss_pred             hcCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHH--HHHhhccCCCCCeEEEEcCCccccccCC
Q 019722          110 SLNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKK--MIETAKATGIQGRIVNVSSSIHSWFSGD  185 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~--l~~~~~~~~~~grIV~vsS~~~~~~~~~  185 (336)
                      +.++++|+||||||+....  .+.+.++|++++++|+.+++.++++++|.  |++++     .++||++||..+..+   
T Consensus        95 ~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~-----~g~iv~isS~~~~~~---  166 (277)
T 2rhc_B           95 ERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERG-----TGRIVNIASTGGKQG---  166 (277)
T ss_dssp             HHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHT-----EEEEEEECCGGGTSC---
T ss_pred             HHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcC-----CeEEEEECccccccC---
Confidence            9999999999999976543  56788999999999999999999999999  88764     489999999887765   


Q ss_pred             cccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccch------------hH
Q 019722          186 MIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREG------------FI  253 (336)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~------------~~  253 (336)
                                    .+....|++||++++.|+++++.|+++.|  |+||+|+||++.|++......            ..
T Consensus       167 --------------~~~~~~Y~asK~a~~~~~~~la~e~~~~g--i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~  230 (277)
T 2rhc_B          167 --------------VVHAAPYSASKHGVVGFTKALGLELARTG--ITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAF  230 (277)
T ss_dssp             --------------CTTCHHHHHHHHHHHHHHHHHHHHHTTTE--EEEEEEEECSBCSHHHHHHHHHHHHHHTCCHHHHH
T ss_pred             --------------CCCCccHHHHHHHHHHHHHHHHHHHHHhC--cEEEEEecCcCcCchhhhhhhhcccccccchHHHH
Confidence                          56678899999999999999999999877  999999999999998654211            00


Q ss_pred             HHHHHHHHHhhcCChHHHHHHHHHHHhcCccccCCceeeccCccc
Q 019722          254 TDLVFFLTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEA  298 (336)
Q Consensus       254 ~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  298 (336)
                      .......+..+...|+|+|.+++++++ +.+.+++|+.+.++|+.
T Consensus       231 ~~~~~~~p~~r~~~~~dvA~~v~~l~s-~~~~~~tG~~~~vdGG~  274 (277)
T 2rhc_B          231 DRITARVPIGRYVQPSEVAEMVAYLIG-PGAAAVTAQALNVCGGL  274 (277)
T ss_dssp             HHHHHHSTTSSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTC
T ss_pred             HHHHhcCCCCCCcCHHHHHHHHHHHhC-chhcCCCCcEEEECCCc
Confidence            111111223346789999999999987 66789999999998874

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=100.00  E-value=1.3e-40  Score=301.62  Aligned_cols=248  Identities=21%  Similarity=0.184  Sum_probs=200.0

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCCh-HHHHHHHHHHHhhCCCCceEEEeccCCC----HHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSL-KAAEEAKARLASDCPGSDIVVLPLDLSS----LSSVRNF  104 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~-~~~~~~~~~l~~~~~~~~~~~~~~Dl~~----~~~v~~~  104 (336)
                      .++|+||++|||||++|||++++++|+++|++|++++|+. +.+++..+++.... +.++.++++|+++    +++++++
T Consensus        18 ~~~l~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~-~~~~~~~~~Dv~~~~~~~~~v~~~   96 (288)
T 2x9g_A           18 GSHMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKER-SNTAVVCQADLTNSNVLPASCEEI   96 (288)
T ss_dssp             ----CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHS-TTCEEEEECCCSCSTTHHHHHHHH
T ss_pred             CcCCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhc-CCceEEEEeecCCccCCHHHHHHH
Confidence            6679999999999999999999999999999999999998 88888877776332 4689999999999    9999999


Q ss_pred             HHHHHhcCCCccEEEEcccCCCCC-------CC-----CCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhc-cCCCCCeE
Q 019722          105 VSQFHSLNLPLNLLINNAGKFAHQ-------HA-----ISEDGIEMTFATNYLGHFLLTKLLLKKMIETAK-ATGIQGRI  171 (336)
Q Consensus       105 ~~~~~~~~~~id~lv~nAg~~~~~-------~~-----~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~-~~~~~grI  171 (336)
                      ++++.+.++++|+||||||+....       .+     .+.++|++++++|+.+++.++++++|.|++++. .....++|
T Consensus        97 ~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~i  176 (288)
T 2x9g_A           97 INSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSI  176 (288)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCCCCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC--------CCCEEE
T ss_pred             HHHHHHhcCCCCEEEECCCCCCCCccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCCCCCeEE
Confidence            999999899999999999976432       23     667889999999999999999999999976531 00113799


Q ss_pred             EEEcCCccccccCCcccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccch
Q 019722          172 VNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREG  251 (336)
Q Consensus       172 V~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~  251 (336)
                      |++||..+..+                 .+....|++||++++.|+++++.|+++.|  |+||+|+||+|.|++ +....
T Consensus       177 v~isS~~~~~~-----------------~~~~~~Y~asKaa~~~l~~~la~e~~~~g--I~vn~v~PG~v~t~~-~~~~~  236 (288)
T 2x9g_A          177 VNLCDAMVDQP-----------------CMAFSLYNMGKHALVGLTQSAALELAPYG--IRVNGVAPGVSLLPV-AMGEE  236 (288)
T ss_dssp             EEECCTTTTSC-----------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEESSCSCCT-TSCHH
T ss_pred             EEEecccccCC-----------------CCCCchHHHHHHHHHHHHHHHHHHhhccC--eEEEEEEeccccCcc-ccChH
Confidence            99999887665                 66778999999999999999999999888  999999999999999 42111


Q ss_pred             hHHHHHHHHHHhhc-CChHHHHHHHHHHHhcCccccCCceeeccCcccc
Q 019722          252 FITDLVFFLTSKLL-KTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAW  299 (336)
Q Consensus       252 ~~~~~~~~~~~~~~-~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  299 (336)
                      .........+..+. .+|+|+|..++|+++ +.+.+++|+++.++|+..
T Consensus       237 ~~~~~~~~~p~~r~~~~pedvA~~v~~l~s-~~~~~itG~~i~vdGG~~  284 (288)
T 2x9g_A          237 EKDKWRRKVPLGRREASAEQIADAVIFLVS-GSAQYITGSIIKVDGGLS  284 (288)
T ss_dssp             HHHHHHHTCTTTSSCCCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTGG
T ss_pred             HHHHHHhhCCCCCCCCCHHHHHHHHHHHhC-ccccCccCCEEEECcchh
Confidence            11112122233445 799999999999997 677899999999998754

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=100.00  E-value=1.7e-40  Score=296.87  Aligned_cols=243  Identities=22%  Similarity=0.252  Sum_probs=205.6

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHh
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHS  110 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  110 (336)
                      ++|+||++|||||++|||++++++|+++|++|++++|+.+++++..+++.... +.++.++++|++++++++++++++.+
T Consensus         3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~   81 (263)
T 3ai3_A            3 MGISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKF-GVRVLEVAVDVATPEGVDAVVESVRS   81 (263)
T ss_dssp             CCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH-CCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhc-CCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            56899999999999999999999999999999999999988888777776542 35789999999999999999999999


Q ss_pred             cCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccc
Q 019722          111 LNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIR  188 (336)
Q Consensus       111 ~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~  188 (336)
                      .++++|+||||||+....  .+.+.++|++++++|+.+++.++++++|.|++++     .++||++||..+..+      
T Consensus        82 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-----~g~iv~isS~~~~~~------  150 (263)
T 3ai3_A           82 SFGGADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARG-----GGAIIHNASICAVQP------  150 (263)
T ss_dssp             HHSSCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-----CEEEEEECCGGGTSC------
T ss_pred             HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-----CcEEEEECchhhcCC------
Confidence            999999999999976432  5678899999999999999999999999998765     489999999887655      


Q ss_pred             ccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchh--------HHHHHHH-
Q 019722          189 YLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGF--------ITDLVFF-  259 (336)
Q Consensus       189 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~--------~~~~~~~-  259 (336)
                                 .+....|++||++++.++++++.|+++.|  |+||+|+||++.|++.......        ....... 
T Consensus       151 -----------~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~  217 (263)
T 3ai3_A          151 -----------LWYEPIYNVTKAALMMFSKTLATEVIKDN--IRVNCINPGLILTPDWIKTAKELTKDNGGDWKGYLQSV  217 (263)
T ss_dssp             -----------CTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCBCCHHHHHHHHHHTTTTTCCHHHHHHHH
T ss_pred             -----------CCCcchHHHHHHHHHHHHHHHHHHhhhcC--cEEEEEecCcccCcchhhhhHhhhcccCCcHHHHHHHH
Confidence                       56677899999999999999999999888  9999999999999986542110        1111111 


Q ss_pred             ----HHHhhcCChHHHHHHHHHHHhcCccccCCceeeccCcccc
Q 019722          260 ----LTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAW  299 (336)
Q Consensus       260 ----~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  299 (336)
                          .+..+..+|+|+|..++++++ +...+++|+.+..+|+..
T Consensus       218 ~~~~~p~~~~~~~~dvA~~~~~l~s-~~~~~~~G~~~~vdgG~~  260 (263)
T 3ai3_A          218 ADEHAPIKRFASPEELANFFVFLCS-ERATYSVGSAYFVDGGML  260 (263)
T ss_dssp             HHHHCTTCSCBCHHHHHHHHHHHTS-TTCTTCCSCEEEESTTCC
T ss_pred             HhcCCCCCCCcCHHHHHHHHHHHcC-ccccCCCCcEEEECCCcc
Confidence                223456789999999999987 667889999999988753

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.4e-41  Score=306.81  Aligned_cols=251  Identities=20%  Similarity=0.196  Sum_probs=198.5

Q ss_pred             ccCCCCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHH
Q 019722           26 VTDGCPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFV  105 (336)
Q Consensus        26 ~~~~~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~  105 (336)
                      |+....+++||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.... +..+.++++|++|++++++++
T Consensus        24 ~~~~~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~d~~~v~~~~  102 (281)
T 4dry_A           24 MAQGKGSGEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRT-GNIVRAVVCDVGDPDQVAALF  102 (281)
T ss_dssp             ----------CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH-SSCEEEEECCTTCHHHHHHHH
T ss_pred             ccccCCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC-CCeEEEEEcCCCCHHHHHHHH
Confidence            3434567899999999999999999999999999999999999999988888887653 334699999999999999999


Q ss_pred             HHHHhcCCCccEEEEcccCCCC---CCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccc
Q 019722          106 SQFHSLNLPLNLLINNAGKFAH---QHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWF  182 (336)
Q Consensus       106 ~~~~~~~~~id~lv~nAg~~~~---~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~  182 (336)
                      +++.+.++++|+||||||+...   ..+.+.++|++++++|+.|++.++++++|.|++++.   ..|+||++||..+..+
T Consensus       103 ~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~---~~g~IV~isS~~~~~~  179 (281)
T 4dry_A          103 AAVRAEFARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTP---RGGRIINNGSISAQTP  179 (281)
T ss_dssp             HHHHHHHSCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSS---CCEEEEEECCGGGTCC
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC---CCcEEEEECCHHhCCC
Confidence            9999999999999999997643   267788999999999999999999999999987531   1479999999988766


Q ss_pred             cCCcccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHHHHHHHH
Q 019722          183 SGDMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTS  262 (336)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~  262 (336)
                                       .++...|++||+++++|+++++.|+++.|  |+||+|+||+|+|++.+.............+.
T Consensus       180 -----------------~~~~~~Y~asKaa~~~l~~~la~e~~~~g--I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~  240 (281)
T 4dry_A          180 -----------------RPNSAPYTATKHAITGLTKSTALDGRMHD--IACGQIDIGNAATDMTARMSTGVLQANGEVAA  240 (281)
T ss_dssp             -----------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEEECBCC-------CEEECTTSCEEE
T ss_pred             -----------------CCCChhHHHHHHHHHHHHHHHHHHhcccC--eEEEEEEECcCcChhhhhhcchhhhhhhcccc
Confidence                             67788999999999999999999999988  99999999999999977542211111111223


Q ss_pred             hhcCChHHHHHHHHHHHhcCccccCCceeeccCcccc
Q 019722          263 KLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAW  299 (336)
Q Consensus       263 ~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  299 (336)
                      .+..+|+|+|.+++|+++.+....+++..+......+
T Consensus       241 ~~~~~pedvA~~v~fL~s~~~~~~i~~~~i~p~~~~~  277 (281)
T 4dry_A          241 EPTIPIEHIAEAVVYMASLPLSANVLTMTVMATRMPL  277 (281)
T ss_dssp             CCCBCHHHHHHHHHHHHHSCTTEEEEEEEEEETTSSC
T ss_pred             cCCCCHHHHHHHHHHHhCCCccCccccEEEEeccccc
Confidence            3467899999999999998888777777776555433

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=5.5e-41  Score=305.35  Aligned_cols=243  Identities=24%  Similarity=0.245  Sum_probs=204.7

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCC---ceEEEeccCCCHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGS---DIVVLPLDLSSLSSVRNFVS  106 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~---~~~~~~~Dl~~~~~v~~~~~  106 (336)
                      +++++||++|||||++|||++++++|+++|++|++++|+.+++++..+++...  +.   ++.++++|++++++++++++
T Consensus        21 m~~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~~~~Dv~d~~~v~~~~~   98 (297)
T 1xhl_A           21 MARFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKA--GVPAEKINAVVADVTEASGQDDIIN   98 (297)
T ss_dssp             --CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCGGGEEEEECCTTSHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCCCceEEEEecCCCCHHHHHHHHH
Confidence            66799999999999999999999999999999999999999888888887654  33   79999999999999999999


Q ss_pred             HHHhcCCCccEEEEcccCCCC----CCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccc
Q 019722          107 QFHSLNLPLNLLINNAGKFAH----QHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWF  182 (336)
Q Consensus       107 ~~~~~~~~id~lv~nAg~~~~----~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~  182 (336)
                      ++.+.++++|+||||||+...    ..+.+.++|++++++|+.+++.++++++|.|++++      |+||++||..+..+
T Consensus        99 ~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~------g~IV~isS~~~~~~  172 (297)
T 1xhl_A           99 TTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK------GEIVNVSSIVAGPQ  172 (297)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT------CEEEEECCGGGSSS
T ss_pred             HHHHhcCCCCEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC------CEEEEEcCchhccC
Confidence            999999999999999997543    24667899999999999999999999999998753      79999999877654


Q ss_pred             cCCcccccccccCCCCCC-ChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccc--hh----HHH
Q 019722          183 SGDMIRYLGQISRNKSHY-DATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRERE--GF----ITD  255 (336)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~-~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~--~~----~~~  255 (336)
                                       . ++...|++||++++.|+++++.|+++.|  |+||+|+||+|+|++.....  ..    ...
T Consensus       173 -----------------~~~~~~~Y~asKaa~~~l~~~la~el~~~g--I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~  233 (297)
T 1xhl_A          173 -----------------AHSGYPYYACAKAALDQYTRCTAIDLIQHG--VRVNSVSPGAVATGFMGAMGLPETASDKLYS  233 (297)
T ss_dssp             -----------------CCTTSHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECCBCSSHHHHTTCCHHHHHHHHH
T ss_pred             -----------------CCCCcchHHHHHHHHHHHHHHHHHHhcccC--eEEEEEeeCCCcCccccccccccccccchHH
Confidence                             3 6678899999999999999999999888  99999999999999865431  10    011


Q ss_pred             HHHH----HHHhhcCChHHHHHHHHHHHhcCc-cccCCceeeccCccccc
Q 019722          256 LVFF----LTSKLLKTIPQGAATTCYVAIHPR-LVNVSGKYFADCNEAWT  300 (336)
Q Consensus       256 ~~~~----~~~~~~~~~~~~a~~~~~l~~~~~-~~~~~G~~~~~~~~~~~  300 (336)
                      ....    .+..+..+|+|+|..++|+++ +. +.+++|+.+.++|+...
T Consensus       234 ~~~~~~~~~p~~r~~~pedvA~~v~~l~s-~~~~~~itG~~i~vdGG~~~  282 (297)
T 1xhl_A          234 FIGSRKECIPVGHCGKPEEIANIIVFLAD-RNLSSYIIGQSIVADGGSTL  282 (297)
T ss_dssp             HHHHCTTTCTTSSCBCHHHHHHHHHHHHC-HHHHTTCCSCEEEESTTGGG
T ss_pred             HHHHHHhcCCCCCCcCHHHHHHHHHHHhC-CcccCCccCcEEEECCCccc
Confidence            1111    123356789999999999997 55 78999999999988543

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=1.7e-40  Score=294.00  Aligned_cols=236  Identities=22%  Similarity=0.209  Sum_probs=200.3

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHh
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHS  110 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  110 (336)
                      |+|+||++|||||++|||++++++|+++|++|++++|+.+++++..+++       .+.++++|++|+++++++++++.+
T Consensus         1 m~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-------~~~~~~~D~~~~~~~~~~~~~~~~   73 (245)
T 1uls_A            1 MRLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV-------GAHPVVMDVADPASVERGFAEALA   73 (245)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT-------TCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc-------CCEEEEecCCCHHHHHHHHHHHHH
Confidence            4688999999999999999999999999999999999988776554432       278899999999999999999999


Q ss_pred             cCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccc
Q 019722          111 LNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIR  188 (336)
Q Consensus       111 ~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~  188 (336)
                      .++++|+||||||+....  .+.+.++|++++++|+.+++.++++++|.|++++     .++||++||.. ..+      
T Consensus        74 ~~g~id~lvn~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~-----~g~iv~isS~~-~~~------  141 (245)
T 1uls_A           74 HLGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKN-----PGSIVLTASRV-YLG------  141 (245)
T ss_dssp             HHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC-----CEEEEEECCGG-GGC------
T ss_pred             HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-----CCEEEEEccch-hcC------
Confidence            999999999999976543  5678899999999999999999999999998754     58999999987 554      


Q ss_pred             ccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhH-HHHHHHHHHhhcCC
Q 019722          189 YLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFI-TDLVFFLTSKLLKT  267 (336)
Q Consensus       189 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~-~~~~~~~~~~~~~~  267 (336)
                                 .++...|++||++++.|+++++.|+++.|  |+||+|+||+++|++.+...... .......+..+..+
T Consensus       142 -----------~~~~~~Y~asK~a~~~~~~~la~e~~~~g--i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~~~~~  208 (245)
T 1uls_A          142 -----------NLGQANYAASMAGVVGLTRTLALELGRWG--IRVNTLAPGFIETRMTAKVPEKVREKAIAATPLGRAGK  208 (245)
T ss_dssp             -----------CTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCTTTSSSCHHHHHHHHHTCTTCSCBC
T ss_pred             -----------CCCchhHHHHHHHHHHHHHHHHHHHhHhC--eEEEEEEeCcCcCcchhhcCHHHHHHHHhhCCCCCCcC
Confidence                       55677899999999999999999999988  99999999999999977543221 11212223345678


Q ss_pred             hHHHHHHHHHHHhcCccccCCceeeccCcccc
Q 019722          268 IPQGAATTCYVAIHPRLVNVSGKYFADCNEAW  299 (336)
Q Consensus       268 ~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  299 (336)
                      |+|+|..++++++ +...+++|+.+..+|+..
T Consensus       209 ~~dvA~~v~~l~s-~~~~~~tG~~~~vdgG~~  239 (245)
T 1uls_A          209 PLEVAYAALFLLS-DESSFITGQVLFVDGGRT  239 (245)
T ss_dssp             HHHHHHHHHHHHS-GGGTTCCSCEEEESTTTT
T ss_pred             HHHHHHHHHHHhC-chhcCCcCCEEEECCCcc
Confidence            9999999999987 667899999999998754

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=100.00  E-value=1e-40  Score=297.54  Aligned_cols=238  Identities=21%  Similarity=0.226  Sum_probs=202.2

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHH--HHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhc
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKA--AEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSL  111 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~--~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  111 (336)
                      .||++|||||++|||++++++|+++|++|++++|+.+.  +++..++++..  +.++.++++|++++++++++++++.+.
T Consensus         1 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~   78 (258)
T 3a28_C            1 MSKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAA--DQKAVFVGLDVTDKANFDSAIDEAAEK   78 (258)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTT--TCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            37999999999999999999999999999999999887  77777777654  568999999999999999999999999


Q ss_pred             CCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCC-CeEEEEcCCccccccCCccc
Q 019722          112 NLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQ-GRIVNVSSSIHSWFSGDMIR  188 (336)
Q Consensus       112 ~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~-grIV~vsS~~~~~~~~~~~~  188 (336)
                      ++++|+||||||+....  .+.+.++|++++++|+.+++.++++++|.|++++     . ++||++||..+..+      
T Consensus        79 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-----~~g~iv~isS~~~~~~------  147 (258)
T 3a28_C           79 LGGFDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELG-----VKGKIINAASIAAIQG------  147 (258)
T ss_dssp             HTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-----CCCEEEEECCGGGTSC------
T ss_pred             hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcC-----CCcEEEEECcchhccC------
Confidence            99999999999976543  5678899999999999999999999999998764     3 89999999887665      


Q ss_pred             ccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccc------------hhHHHH
Q 019722          189 YLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRERE------------GFITDL  256 (336)
Q Consensus       189 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~------------~~~~~~  256 (336)
                                 .+....|++||++++.|+++++.|+++.|  |+||+|+||+++|++.+...            ......
T Consensus       148 -----------~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~  214 (258)
T 3a28_C          148 -----------FPILSAYSTTKFAVRGLTQAAAQELAPKG--HTVNAYAPGIVGTGMWEQIDAELSKINGKPIGENFKEY  214 (258)
T ss_dssp             -----------CTTCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECCBCSHHHHHHHHHHHHHHCCCTTHHHHHH
T ss_pred             -----------CCCchhHHHHHHHHHHHHHHHHHHHHhhC--eEEEEEECCccCChhhhhhhhhhccccCCchHHHHHHH
Confidence                       56678999999999999999999999988  99999999999999865411            011111


Q ss_pred             HHHHHHhhcCChHHHHHHHHHHHhcCccccCCceeeccCccc
Q 019722          257 VFFLTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEA  298 (336)
Q Consensus       257 ~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  298 (336)
                      ....+..+...|+|+|..++|+++ +.+.+++|+.+.++|+.
T Consensus       215 ~~~~p~~r~~~p~dvA~~v~~l~s-~~~~~~tG~~i~vdGG~  255 (258)
T 3a28_C          215 SSSIALGRPSVPEDVAGLVSFLAS-ENSNYVTGQVMLVDGGM  255 (258)
T ss_dssp             HTTCTTSSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESSSS
T ss_pred             HhcCCCCCccCHHHHHHHHHHHhC-cccCCCCCCEEEECCCE
Confidence            111233456789999999999987 66789999999999874

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=100.00  E-value=3.3e-41  Score=302.07  Aligned_cols=232  Identities=19%  Similarity=0.214  Sum_probs=196.2

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      +++++||++|||||++|||+++|++|+++|++|++++|+.+...             ....+++|+++.++++.+++++.
T Consensus        23 m~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~-------------~~~~~~~Dv~~~~~~~~~~~~~~   89 (266)
T 3uxy_A           23 MQGFEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIA-------------ADLHLPGDLREAAYADGLPGAVA   89 (266)
T ss_dssp             ---CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSC-------------CSEECCCCTTSHHHHHHHHHHHH
T ss_pred             hhCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH-------------hhhccCcCCCCHHHHHHHHHHHH
Confidence            67899999999999999999999999999999999999865321             22456899999999999999999


Q ss_pred             hcCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcc
Q 019722          110 SLNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMI  187 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~  187 (336)
                      +.++++|+||||||+....  .+.+.++|++++++|+.|++.++++++|.|++++     .|+||++||..+..+     
T Consensus        90 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-----~g~iv~isS~~~~~~-----  159 (266)
T 3uxy_A           90 AGLGRLDIVVNNAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAG-----GGAIVNVASCWGLRP-----  159 (266)
T ss_dssp             HHHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-----CEEEEEECCSBTTBC-----
T ss_pred             HhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-----CcEEEEECCHHhCCC-----
Confidence            9999999999999987643  5678899999999999999999999999999875     589999999988766     


Q ss_pred             cccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccch--------hHHHHHHH
Q 019722          188 RYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREG--------FITDLVFF  259 (336)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~--------~~~~~~~~  259 (336)
                                  .++...|++||++++.|+++++.|+++.|  |+||+|+||+|+|++.+....        ........
T Consensus       160 ------------~~~~~~Y~asKaa~~~l~~~la~e~~~~g--I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~  225 (266)
T 3uxy_A          160 ------------GPGHALYCLTKAALASLTQCMGMDHAPQG--IRINAVCPNEVNTPMLRTGFAKRGFDPDRAVAELGRT  225 (266)
T ss_dssp             ------------CTTBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEESSBCCHHHHHHHHHTTCCHHHHHHHHHTT
T ss_pred             ------------CCCChHHHHHHHHHHHHHHHHHHHhhhcC--cEEEEEeeCCCcchHhhhhhhcccccchHHHHHHHhc
Confidence                        67788999999999999999999999988  999999999999998654211        01112222


Q ss_pred             HHHhhcCChHHHHHHHHHHHhcCccccCCceeeccCcccc
Q 019722          260 LTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAW  299 (336)
Q Consensus       260 ~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  299 (336)
                      .+..+..+|+|+|.+++|+++ +.+.+++|+.+.++|+..
T Consensus       226 ~p~~r~~~pedvA~~v~~L~s-~~~~~itG~~i~vdGG~~  264 (266)
T 3uxy_A          226 VPLGRIAEPEDIADVVLFLAS-DAARYLCGSLVEVNGGKA  264 (266)
T ss_dssp             STTSSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTCC
T ss_pred             CCCCCCcCHHHHHHHHHHHhC-chhcCCcCCEEEECcCEe
Confidence            334456789999999999997 677899999999998754

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=100.00  E-value=1.2e-40  Score=295.55  Aligned_cols=237  Identities=25%  Similarity=0.298  Sum_probs=193.0

Q ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCCh-HHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHh
Q 019722           32 NLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSL-KAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHS  110 (336)
Q Consensus        32 ~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~-~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  110 (336)
                      +|+||++|||||++|||++++++|+++|++|++++|+. +++++   +++..  +.++.++++|++++++++++++++.+
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~---~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~   78 (249)
T 2ew8_A            4 RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEA---AIRNL--GRRVLTVKCDVSQPGDVEAFGKQVIS   78 (249)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHH---HHHHT--TCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHH---HHHhc--CCcEEEEEeecCCHHHHHHHHHHHHH
Confidence            58899999999999999999999999999999999998 66654   33322  46899999999999999999999999


Q ss_pred             cCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccc
Q 019722          111 LNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIR  188 (336)
Q Consensus       111 ~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~  188 (336)
                      .++++|+||||||+....  .+.+.++|++++++|+.+++.++++++|.|++++     .++||++||..+..+      
T Consensus        79 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-----~g~iv~isS~~~~~~------  147 (249)
T 2ew8_A           79 TFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNG-----WGRIINLTSTTYWLK------  147 (249)
T ss_dssp             HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-----CEEEEEECCGGGGSC------
T ss_pred             HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-----CeEEEEEcchhhccC------
Confidence            899999999999976543  5678899999999999999999999999998865     489999999887765      


Q ss_pred             ccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCC-ccchhHHHHHHH--HHHhhc
Q 019722          189 YLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTR-EREGFITDLVFF--LTSKLL  265 (336)
Q Consensus       189 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~-~~~~~~~~~~~~--~~~~~~  265 (336)
                                 .+....|++||++++.|+++++.|+++.|  |+||+|+||+++|++.+ ............  .+..+.
T Consensus       148 -----------~~~~~~Y~asK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~  214 (249)
T 2ew8_A          148 -----------IEAYTHYISTKAANIGFTRALASDLGKDG--ITVNAIAPSLVRTATTEASALSAMFDVLPNMLQAIPRL  214 (249)
T ss_dssp             -----------CSSCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCC------------------CTTSSSCSC
T ss_pred             -----------CCCchhHHHHHHHHHHHHHHHHHHHHhcC--cEEEEEecCcCcCccchhccccchhhHHHHhhCccCCC
Confidence                       56678899999999999999999999888  99999999999999876 321100011111  123346


Q ss_pred             CChHHHHHHHHHHHhcCccccCCceeeccCccc
Q 019722          266 KTIPQGAATTCYVAIHPRLVNVSGKYFADCNEA  298 (336)
Q Consensus       266 ~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  298 (336)
                      .+|+|+|..++|+++ +.+.+++|+.+.++|+.
T Consensus       215 ~~p~dva~~~~~l~s-~~~~~~tG~~~~vdGG~  246 (249)
T 2ew8_A          215 QVPLDLTGAAAFLAS-DDASFITGQTLAVDGGM  246 (249)
T ss_dssp             CCTHHHHHHHHHHTS-GGGTTCCSCEEEESSSC
T ss_pred             CCHHHHHHHHHHHcC-cccCCCCCcEEEECCCc
Confidence            789999999999987 67789999999998874

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=100.00  E-value=2e-40  Score=305.68  Aligned_cols=249  Identities=18%  Similarity=0.163  Sum_probs=204.5

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEee-CChHHHHHHHHHHHhhCCCCceEEEeccCCCHH---------
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPA-RSLKAAEEAKARLASDCPGSDIVVLPLDLSSLS---------   99 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~-r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~---------   99 (336)
                      +.+|+||++|||||++|||++++++|+++|++|++++ |+.+.++++.+++.... +.++.++++|+++++         
T Consensus        41 m~~l~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~d~~~~~~~~~~~  119 (328)
T 2qhx_A           41 MTAPTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARR-PNSAITVQADLSNVATAPVSGADG  119 (328)
T ss_dssp             ----CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHS-TTCEEEEECCCSSSCBCC------
T ss_pred             ccccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhc-CCeEEEEEeeCCCchhcccccccc
Confidence            3448999999999999999999999999999999999 99998888888876333 468999999999999         


Q ss_pred             --------HHHHHHHHHHhcCCCccEEEEcccCCCCC--CCCC--------------chhhhhHHHHHHhHHHHHHHHHH
Q 019722          100 --------SVRNFVSQFHSLNLPLNLLINNAGKFAHQ--HAIS--------------EDGIEMTFATNYLGHFLLTKLLL  155 (336)
Q Consensus       100 --------~v~~~~~~~~~~~~~id~lv~nAg~~~~~--~~~~--------------~~~~~~~~~vn~~~~~~l~~~~~  155 (336)
                              +++++++++.+.++++|+||||||+....  .+.+              .++|++++++|+.+++.++++++
T Consensus       120 ~~~~~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~  199 (328)
T 2qhx_A          120 SAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFA  199 (328)
T ss_dssp             -CCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-------------CHHHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred             ccccccHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHHHHHHHHHHHHH
Confidence                    99999999999999999999999976432  4555              78999999999999999999999


Q ss_pred             HHHHHhhc-cCCCCCeEEEEcCCccccccCCcccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEE
Q 019722          156 KKMIETAK-ATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVN  234 (336)
Q Consensus       156 ~~l~~~~~-~~~~~grIV~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn  234 (336)
                      |.|.+++. ..+..++||++||..+..+                 .++...|++||++++.|++.++.|+++.|  |+||
T Consensus       200 ~~m~~~~~~~~~~~g~IV~isS~~~~~~-----------------~~~~~~Y~asKaal~~l~~~la~el~~~g--Irvn  260 (328)
T 2qhx_A          200 HRVAGTPAKHRGTNYSIINMVDAMTNQP-----------------LLGYTIYTMAKGALEGLTRSAALELAPLQ--IRVN  260 (328)
T ss_dssp             HHHHHSCGGGSCSCEEEEEECCTTTTSC-----------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEE
T ss_pred             HHHHhcCCcCCCCCcEEEEECchhhccC-----------------CCCcHHHHHHHHHHHHHHHHHHHHHhhcC--cEEE
Confidence            99987531 0111379999999987765                 66778999999999999999999999988  9999


Q ss_pred             EeeCCceeCCCCCccchhHHHHHHHHHHh-hcCChHHHHHHHHHHHhcCccccCCceeeccCccccc
Q 019722          235 CVHPGIVRTRLTREREGFITDLVFFLTSK-LLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWT  300 (336)
Q Consensus       235 ~v~PG~v~T~~~~~~~~~~~~~~~~~~~~-~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~  300 (336)
                      +|+||+|+|++ ..............+.. +..+|+|+|.+++|+++ +.+.+++|+++.++|+...
T Consensus       261 ~v~PG~v~T~~-~~~~~~~~~~~~~~p~~~r~~~pedvA~~v~~l~s-~~~~~itG~~i~vdGG~~~  325 (328)
T 2qhx_A          261 GVGPGLSVLVD-DMPPAVWEGHRSKVPLYQRDSSAAEVSDVVIFLCS-SKAKYITGTCVKVDGGYSL  325 (328)
T ss_dssp             EEEESSBSCCC-CSCHHHHHHHHTTCTTTTSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTGGG
T ss_pred             EEecCcccCCc-cccHHHHHHHHhhCCCCCCCCCHHHHHHHHHHHhC-ccccCccCcEEEECCCccc
Confidence            99999999999 44322222221222333 56789999999999997 6778999999999988544

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=100.00  E-value=7.8e-41  Score=298.10  Aligned_cols=241  Identities=19%  Similarity=0.173  Sum_probs=190.8

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      .++++||++|||||++|||++++++|+++|++|++++|+.+...   +++     +.++.++++|++++++++++++.+.
T Consensus         4 ~m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~---~~~-----~~~~~~~~~D~~~~~~v~~~~~~~~   75 (257)
T 3tl3_A            4 SMEIRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGEDVV---ADL-----GDRARFAAADVTDEAAVASALDLAE   75 (257)
T ss_dssp             ------CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCHHHH---HHT-----CTTEEEEECCTTCHHHHHHHHHHHH
T ss_pred             cceecCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCchHHHH---Hhc-----CCceEEEECCCCCHHHHHHHHHHHH
Confidence            57899999999999999999999999999999999999755432   222     5689999999999999999999887


Q ss_pred             hcCCCccEEEEcccCCCCC------CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhcc---CCCCCeEEEEcCCccc
Q 019722          110 SLNLPLNLLINNAGKFAHQ------HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKA---TGIQGRIVNVSSSIHS  180 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~~~------~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~---~~~~grIV~vsS~~~~  180 (336)
                      + ++++|+||||||+....      .+.+.++|++++++|+.+++.++++++|.|.+....   ....|+||++||..+.
T Consensus        76 ~-~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~  154 (257)
T 3tl3_A           76 T-MGTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAF  154 (257)
T ss_dssp             H-HSCEEEEEECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCCC--
T ss_pred             H-hCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcchhhc
Confidence            7 89999999999976432      247889999999999999999999999999872100   0125899999999887


Q ss_pred             cccCCcccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHHH-HH
Q 019722          181 WFSGDMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLV-FF  259 (336)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~-~~  259 (336)
                      .+                 .++...|++||++++.|+++++.|+++.|  |+||+|+||+|+|++.+.......... ..
T Consensus       155 ~~-----------------~~~~~~Y~asKaa~~~~~~~la~e~~~~g--I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~  215 (257)
T 3tl3_A          155 DG-----------------QIGQAAYSASKGGVVGMTLPIARDLASHR--IRVMTIAPGLFDTPLLASLPEEARASLGKQ  215 (257)
T ss_dssp             CC-----------------HHHHHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCTTC---CHHHHHHHHHT
T ss_pred             CC-----------------CCCCccHHHHHHHHHHHHHHHHHHhcccC--cEEEEEEecCccChhhhhccHHHHHHHHhc
Confidence            65                 66788999999999999999999999988  999999999999999887543322222 22


Q ss_pred             HHH-hhcCChHHHHHHHHHHHhcCccccCCceeeccCcccccc
Q 019722          260 LTS-KLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWTS  301 (336)
Q Consensus       260 ~~~-~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~~  301 (336)
                      .+. .+..+|+|+|..++|++++   .+++|+.+.++|+....
T Consensus       216 ~~~~~r~~~p~dva~~v~~l~s~---~~itG~~i~vdGG~~~~  255 (257)
T 3tl3_A          216 VPHPSRLGNPDEYGALAVHIIEN---PMLNGEVIRLDGAIRMA  255 (257)
T ss_dssp             SSSSCSCBCHHHHHHHHHHHHHC---TTCCSCEEEESTTC---
T ss_pred             CCCCCCccCHHHHHHHHHHHhcC---CCCCCCEEEECCCccCC
Confidence            233 5667899999999999973   68999999999986543

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=100.00  E-value=2.3e-40  Score=304.60  Aligned_cols=246  Identities=22%  Similarity=0.218  Sum_probs=207.9

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCC----------hHHHHHHHHHHHhhCCCCceEEEeccCCCHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARS----------LKAAEEAKARLASDCPGSDIVVLPLDLSSLS   99 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~----------~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~   99 (336)
                      +.+++||++|||||++|||+++|++|+++|++|++++|+          .+.+++..+++...  +.++.++++|++|++
T Consensus        22 m~~l~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~   99 (322)
T 3qlj_A           22 MGVVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAA--GGEAVADGSNVADWD   99 (322)
T ss_dssp             CCTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHT--TCEEEEECCCTTSHH
T ss_pred             hcccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhc--CCcEEEEECCCCCHH
Confidence            667999999999999999999999999999999999998          67788888888765  568999999999999


Q ss_pred             HHHHHHHHHHhcCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhcc-CCCCCeEEEEcC
Q 019722          100 SVRNFVSQFHSLNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKA-TGIQGRIVNVSS  176 (336)
Q Consensus       100 ~v~~~~~~~~~~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~-~~~~grIV~vsS  176 (336)
                      +++++++++.+.++++|+||||||+....  .+.+.++|++++++|+.+++.+++++.|.|.+.... ....|+||++||
T Consensus       100 ~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~IV~isS  179 (322)
T 3qlj_A          100 QAAGLIQTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSS  179 (322)
T ss_dssp             HHHHHHHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEECC
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCCcEEEEEcC
Confidence            99999999999999999999999987643  567889999999999999999999999999875421 122379999999


Q ss_pred             CccccccCCcccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHH
Q 019722          177 SIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDL  256 (336)
Q Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~  256 (336)
                      ..+..+                 .++...|++||++++.|+++++.|+++.|  |+||+|+|| +.|++.......... 
T Consensus       180 ~~~~~~-----------------~~~~~~Y~asKaal~~l~~~la~e~~~~g--I~vn~v~PG-~~t~~~~~~~~~~~~-  238 (322)
T 3qlj_A          180 GAGLQG-----------------SVGQGNYSAAKAGIATLTLVGAAEMGRYG--VTVNAIAPS-ARTRMTETVFAEMMA-  238 (322)
T ss_dssp             HHHHHC-----------------BTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEEC-TTSCCSCCSCCC----
T ss_pred             HHHccC-----------------CCCCccHHHHHHHHHHHHHHHHHHhcccC--cEEEEecCC-CCCccchhhhhhhhh-
Confidence            888766                 56678899999999999999999999988  999999999 999988764321111 


Q ss_pred             HHHHHHhhcCChHHHHHHHHHHHhcCccccCCceeeccCccccc
Q 019722          257 VFFLTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWT  300 (336)
Q Consensus       257 ~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~  300 (336)
                       ..........|+|+|.+++|+++ +.+.+++|+.+.++|+...
T Consensus       239 -~~~~~~~~~~pedva~~v~~L~s-~~~~~itG~~i~vdGG~~~  280 (322)
T 3qlj_A          239 -TQDQDFDAMAPENVSPLVVWLGS-AEARDVTGKVFEVEGGKIR  280 (322)
T ss_dssp             ------CCTTCGGGTHHHHHHHTS-GGGGGCCSCEEEEETTEEE
T ss_pred             -ccccccCCCCHHHHHHHHHHHhC-ccccCCCCCEEEECCCccc
Confidence             11222234689999999999997 7778999999999987543

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=100.00  E-value=3e-40  Score=294.15  Aligned_cols=238  Identities=23%  Similarity=0.261  Sum_probs=202.3

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCCC
Q 019722           35 SVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLP  114 (336)
Q Consensus        35 gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  114 (336)
                      +|++|||||++|||++++++|+++|++|++++|+.+++++..++++..  +.++.++++|++|+++++++++++.+.+++
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   79 (256)
T 1geg_A            2 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQA--GGHAVAVKVDVSDRDQVFAAVEQARKTLGG   79 (256)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTSHHHHHHHHHHHHHHTTC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            689999999999999999999999999999999999888888777654  457999999999999999999999999999


Q ss_pred             ccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccccccc
Q 019722          115 LNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQ  192 (336)
Q Consensus       115 id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~~  192 (336)
                      +|+||||||+....  .+.+.++|++++++|+.+++.++++++|.|++++.    .++||++||..+..+          
T Consensus        80 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~----~g~iv~isS~~~~~~----------  145 (256)
T 1geg_A           80 FDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGH----GGKIINACSQAGHVG----------  145 (256)
T ss_dssp             CCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTS----CEEEEEECCGGGTSC----------
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC----CCEEEEECchhhcCC----------
Confidence            99999999976432  56788999999999999999999999999987631    379999999887765          


Q ss_pred             ccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccch-----------h-HHHHHHHH
Q 019722          193 ISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREG-----------F-ITDLVFFL  260 (336)
Q Consensus       193 ~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~-----------~-~~~~~~~~  260 (336)
                             .+....|++||++++.|+++++.|+++.|  |+||+|+||+++|++......           . ........
T Consensus       146 -------~~~~~~Y~asK~a~~~~~~~la~e~~~~g--i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (256)
T 1geg_A          146 -------NPELAVYSSSKFAVRGLTQTAARDLAPLG--ITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRI  216 (256)
T ss_dssp             -------CTTBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHTTC
T ss_pred             -------CCCchhHHHHHHHHHHHHHHHHHHHHHcC--eEEEEEEECCCccchhhhhhhhccccccCChHHHHHHHHhcC
Confidence                   56678899999999999999999999888  999999999999998654210           0 01111112


Q ss_pred             HHhhcCChHHHHHHHHHHHhcCccccCCceeeccCccc
Q 019722          261 TSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEA  298 (336)
Q Consensus       261 ~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  298 (336)
                      +..+..+|+|+|..++|+++ +.+.+++|+.+.++|+.
T Consensus       217 p~~r~~~p~dvA~~v~~l~s-~~~~~~tG~~i~vdGG~  253 (256)
T 1geg_A          217 TLGRLSEPEDVAACVSYLAS-PDSDYMTGQSLLIDGGM  253 (256)
T ss_dssp             TTCSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESSSS
T ss_pred             CCCCCcCHHHHHHHHHHHhC-ccccCCCCCEEEeCCCc
Confidence            23356789999999999987 66789999999999874

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=100.00  E-value=1.4e-40  Score=297.91  Aligned_cols=245  Identities=19%  Similarity=0.174  Sum_probs=208.0

Q ss_pred             CCCCCCCEEEEeCCC--ChHHHHHHHHHHHCCCEEEEeeCChHHH-HHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGAT--SGIGAETARVLAKRGARLVLPARSLKAA-EEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVS  106 (336)
Q Consensus        30 ~~~l~gk~~lItGgs--~gIG~aia~~L~~~G~~V~~~~r~~~~~-~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~  106 (336)
                      .++++||++|||||+  +|||++++++|+++|++|++++|+.... ++..+++.+.. +.++.++++|++++++++++++
T Consensus        15 ~~~l~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~v~~~~~   93 (267)
T 3gdg_A           15 QLSLKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTY-GIKAKAYKCQVDSYESCEKLVK   93 (267)
T ss_dssp             HHCCTTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHH-CCCEECCBCCTTCHHHHHHHHH
T ss_pred             ccCcCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhc-CCceeEEecCCCCHHHHHHHHH
Confidence            578999999999999  9999999999999999999999876544 66666666544 5689999999999999999999


Q ss_pred             HHHhcCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccC
Q 019722          107 QFHSLNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSG  184 (336)
Q Consensus       107 ~~~~~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~  184 (336)
                      ++.+.++++|+||||||+....  .+.+.++|++.+++|+.+++.++++++|.|++++     .|+||++||..+..+..
T Consensus        94 ~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-----~g~iv~isS~~~~~~~~  168 (267)
T 3gdg_A           94 DVVADFGQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERG-----TGSLVITASMSGHIANF  168 (267)
T ss_dssp             HHHHHTSCCSEEEECCCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-----CCEEEEECCGGGTSCCS
T ss_pred             HHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcC-----CceEEEEccccccccCC
Confidence            9999999999999999977553  5678899999999999999999999999999876     58999999988765421


Q ss_pred             CcccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHH-HHHHHHh
Q 019722          185 DMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDL-VFFLTSK  263 (336)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~-~~~~~~~  263 (336)
                                     .+....|++||++++.|+++++.|+++.   |+||+|+||+++|++.+......... ....+..
T Consensus       169 ---------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~---i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~  230 (267)
T 3gdg_A          169 ---------------PQEQTSYNVAKAGCIHMARSLANEWRDF---ARVNSISPGYIDTGLSDFVPKETQQLWHSMIPMG  230 (267)
T ss_dssp             ---------------SSCCHHHHHHHHHHHHHHHHHHHHTTTT---CEEEEEEECCEECSCGGGSCHHHHHHHHTTSTTS
T ss_pred             ---------------CCCCCcchHHHHHHHHHHHHHHHHhccC---cEEEEEECCccccchhhhCCHHHHHHHHhcCCCC
Confidence                           2467789999999999999999999753   99999999999999987654332222 2233445


Q ss_pred             hcCChHHHHHHHHHHHhcCccccCCceeeccCcccc
Q 019722          264 LLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAW  299 (336)
Q Consensus       264 ~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  299 (336)
                      +...|+|++.+++|+++ +.+.+++|+.+.++|+..
T Consensus       231 r~~~~~dva~~~~~l~s-~~~~~itG~~i~vdgG~~  265 (267)
T 3gdg_A          231 RDGLAKELKGAYVYFAS-DASTYTTGADLLIDGGYT  265 (267)
T ss_dssp             SCEETHHHHHHHHHHHS-TTCTTCCSCEEEESTTGG
T ss_pred             CCcCHHHHHhHhheeec-CccccccCCEEEECCcee
Confidence            56679999999999997 778899999999998754

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=1.4e-40  Score=300.24  Aligned_cols=241  Identities=23%  Similarity=0.255  Sum_probs=204.0

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCC---ceEEEeccCCCHHHHHHHHHH
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGS---DIVVLPLDLSSLSSVRNFVSQ  107 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~---~~~~~~~Dl~~~~~v~~~~~~  107 (336)
                      ++|+||++|||||++|||++++++|+++|++|++++|+.+++++..+++...  +.   ++.++++|+++++++++++++
T Consensus         2 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~~~Dv~~~~~v~~~~~~   79 (280)
T 1xkq_A            2 PRFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKS--GVSEKQVNSVVADVTTEDGQDQIINS   79 (280)
T ss_dssp             CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT--TCCGGGEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHc--CCCCcceEEEEecCCCHHHHHHHHHH
Confidence            4689999999999999999999999999999999999999888888877654  33   799999999999999999999


Q ss_pred             HHhcCCCccEEEEcccCCCC------CCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCcccc
Q 019722          108 FHSLNLPLNLLINNAGKFAH------QHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSW  181 (336)
Q Consensus       108 ~~~~~~~id~lv~nAg~~~~------~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~  181 (336)
                      +.+.++++|+||||||+...      ..+.+.++|++++++|+.+++.++++++|.|++++      ++||++||..+..
T Consensus        80 ~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~------g~iv~isS~~~~~  153 (280)
T 1xkq_A           80 TLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK------GEIVNVSSIVAGP  153 (280)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT------CEEEEECCGGGSS
T ss_pred             HHHhcCCCCEEEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCC------CcEEEecCccccC
Confidence            99999999999999997643      23567889999999999999999999999998753      7999999987765


Q ss_pred             ccCCcccccccccCCCCCC-ChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccc--hh----HH
Q 019722          182 FSGDMIRYLGQISRNKSHY-DATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRERE--GF----IT  254 (336)
Q Consensus       182 ~~~~~~~~~~~~~~~~~~~-~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~--~~----~~  254 (336)
                      +                 . +....|++||++++.|+++++.|+++.|  |+||+|+||+++|++.+...  ..    ..
T Consensus       154 ~-----------------~~~~~~~Y~asK~a~~~~~~~la~e~~~~g--i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~  214 (280)
T 1xkq_A          154 Q-----------------AQPDFLYYAIAKAALDQYTRSTAIDLAKFG--IRVNSVSPGMVETGFTNAMGMPDQASQKFY  214 (280)
T ss_dssp             S-----------------CCCSSHHHHHHHHHHHHHHHHHHHHHHTTT--CEEEEEEECCBCSSHHHHTTCCHHHHHHHH
T ss_pred             C-----------------CCCcccHHHHHHHHHHHHHHHHHHHhccCC--eEEEEEeeCcCcCCcccccccccccccchH
Confidence            4                 3 5677899999999999999999999888  99999999999999865431  10    01


Q ss_pred             HHHHH----HHHhhcCChHHHHHHHHHHHhcCc-cccCCceeeccCcccc
Q 019722          255 DLVFF----LTSKLLKTIPQGAATTCYVAIHPR-LVNVSGKYFADCNEAW  299 (336)
Q Consensus       255 ~~~~~----~~~~~~~~~~~~a~~~~~l~~~~~-~~~~~G~~~~~~~~~~  299 (336)
                      .....    .+..+..+|+|+|..++|+++ +. +.+++|+.+.++|+..
T Consensus       215 ~~~~~~~~~~p~~~~~~pedvA~~v~~l~s-~~~~~~~tG~~i~vdgG~~  263 (280)
T 1xkq_A          215 NFMASHKECIPIGAAGKPEHIANIILFLAD-RNLSFYILGQSIVADGGTS  263 (280)
T ss_dssp             HHHHHCTTTCTTSSCBCHHHHHHHHHHHHC-HHHHTTCCSCEEEESTTGG
T ss_pred             HHHHHHHcCCCCCCCCCHHHHHHHHHHhcC-cccccCccCCeEEECCCcc
Confidence            11111    123356789999999999987 55 7889999999998754

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=100.00  E-value=8.9e-40  Score=292.12  Aligned_cols=232  Identities=25%  Similarity=0.274  Sum_probs=194.3

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      +.+++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++...  +.++.++++|+++++++.++++++.
T Consensus        24 m~~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~  101 (262)
T 3rkr_A           24 MSSLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAA--GGEAESHACDLSHSDAIAAFATGVL  101 (262)
T ss_dssp             -CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCEEEEEECCTTCHHHHHHHHHHHH
T ss_pred             hhccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHh--CCceeEEEecCCCHHHHHHHHHHHH
Confidence            77899999999999999999999999999999999999999999888888765  5689999999999999999999999


Q ss_pred             hcCCCccEEEEcccCCCC---CCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCc
Q 019722          110 SLNLPLNLLINNAGKFAH---QHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDM  186 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~~---~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~  186 (336)
                      +.++++|+||||||+...   ..+.+.++|++++++|+.|++.++++++|.|++++     .|+||++||..+..+    
T Consensus       102 ~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-----~g~iv~isS~~~~~~----  172 (262)
T 3rkr_A          102 AAHGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAK-----RGHIINISSLAGKNP----  172 (262)
T ss_dssp             HHHSCCSEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-----CCEEEEECSSCSSCC----
T ss_pred             HhcCCCCEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-----CceEEEEechhhcCC----
Confidence            999999999999997332   25678899999999999999999999999998865     589999999988765    


Q ss_pred             ccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHHHHHHHHhhcC
Q 019722          187 IRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSKLLK  266 (336)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~  266 (336)
                                   .+....|++||++++.|+++++.|+.+.|  |+||+|+||+|+|++......       ........
T Consensus       173 -------------~~~~~~Y~asKaa~~~l~~~la~e~~~~g--i~v~~v~PG~v~t~~~~~~~~-------~~~~~~~~  230 (262)
T 3rkr_A          173 -------------VADGAAYTASKWGLNGLMTSAAEELRQHQ--VRVSLVAPGSVRTEFGVGLSA-------KKSALGAI  230 (262)
T ss_dssp             -------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECCC-----------------------CC
T ss_pred             -------------CCCCchHHHHHHHHHHHHHHHHHHhhhcC--cEEEEEecCCCcCCccccccc-------ccccccCC
Confidence                         66778999999999999999999999888  999999999999999766321       22334567


Q ss_pred             ChHHHHHHHHHHHhcCccccCCceeeccC
Q 019722          267 TIPQGAATTCYVAIHPRLVNVSGKYFADC  295 (336)
Q Consensus       267 ~~~~~a~~~~~l~~~~~~~~~~G~~~~~~  295 (336)
                      +|+|+|..++|+++ +...+++|+.+...
T Consensus       231 ~p~dvA~~v~~l~s-~~~~~~~g~~~i~p  258 (262)
T 3rkr_A          231 EPDDIADVVALLAT-QADQSFISEVLVRP  258 (262)
T ss_dssp             CHHHHHHHHHHHHT-CCTTCCEEEEEEEC
T ss_pred             CHHHHHHHHHHHhc-CccccccCcEEecc
Confidence            99999999999998 44566788776543

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=100.00  E-value=3.1e-41  Score=305.23  Aligned_cols=236  Identities=17%  Similarity=0.173  Sum_probs=200.6

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChH-------HHHHHHHHHHhhCCCCceEEEeccCCCHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLK-------AAEEAKARLASDCPGSDIVVLPLDLSSLSSVR  102 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~-------~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~  102 (336)
                      .++++||++|||||++|||++++++|+++|++|++++|+.+       .+++..+++...  +.++.++++|++++++++
T Consensus         4 ~m~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~   81 (285)
T 3sc4_A            4 SMSLRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEA--GGQALPIVGDIRDGDAVA   81 (285)
T ss_dssp             --CCTTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHH--TSEEEEEECCTTSHHHHH
T ss_pred             CcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHH
Confidence            56799999999999999999999999999999999999976       456666666665  568999999999999999


Q ss_pred             HHHHHHHhcCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccc
Q 019722          103 NFVSQFHSLNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHS  180 (336)
Q Consensus       103 ~~~~~~~~~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~  180 (336)
                      ++++++.+.++++|+||||||+....  .+.+.++|++++++|+.+++.++|+++|.|++++     .|+||++||..+.
T Consensus        82 ~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-----~g~iv~isS~~~~  156 (285)
T 3sc4_A           82 AAVAKTVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRD-----NPHILTLSPPIRL  156 (285)
T ss_dssp             HHHHHHHHHHSCCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSS-----SCEEEECCCCCCC
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-----CcEEEEECChhhc
Confidence            99999999999999999999987543  6778899999999999999999999999998765     5899999998876


Q ss_pred             cccCCcccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCC-ceeCCCCCccchhHHHHHHH
Q 019722          181 WFSGDMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPG-IVRTRLTREREGFITDLVFF  259 (336)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG-~v~T~~~~~~~~~~~~~~~~  259 (336)
                      .+.                .++...|++||+++++|+++++.|+++.|  |+||+|+|| .+.|++.+....      ..
T Consensus       157 ~~~----------------~~~~~~Y~asKaal~~~~~~la~e~~~~g--I~vn~v~PG~~v~t~~~~~~~~------~~  212 (285)
T 3sc4_A          157 EPK----------------WLRPTPYMMAKYGMTLCALGIAEELRDAG--IASNTLWPRTTVATAAVQNLLG------GD  212 (285)
T ss_dssp             SGG----------------GSCSHHHHHHHHHHHHHHHHHHHHTGGGT--CEEEEEECSSCBCCHHHHHHHT------SC
T ss_pred             cCC----------------CCCCchHHHHHHHHHHHHHHHHHHhcccC--cEEEEEeCCCccccHHHHhhcc------cc
Confidence            541                24567899999999999999999999988  999999999 689987554211      01


Q ss_pred             HHHhhcCChHHHHHHHHHHHhcCccccCCceeeccCccc
Q 019722          260 LTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEA  298 (336)
Q Consensus       260 ~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  298 (336)
                      .+..+..+|+|+|..++|+++ +.+ +++|+.+.++|+.
T Consensus       213 ~~~~r~~~pedvA~~~~~l~s-~~~-~~tG~~i~~dgg~  249 (285)
T 3sc4_A          213 EAMARSRKPEVYADAAYVVLN-KPS-SYTGNTLLCEDVL  249 (285)
T ss_dssp             CCCTTCBCTHHHHHHHHHHHT-SCT-TCCSCEEEHHHHH
T ss_pred             ccccCCCCHHHHHHHHHHHhC-Ccc-cccceEEEEcCch
Confidence            123456789999999999998 444 8999999888753

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=100.00  E-value=5.9e-40  Score=293.76  Aligned_cols=243  Identities=16%  Similarity=0.159  Sum_probs=206.4

Q ss_pred             CCCCCCEEEEeCCC--ChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHH
Q 019722           31 PNLSSVTAIITGAT--SGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQF  108 (336)
Q Consensus        31 ~~l~gk~~lItGgs--~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~  108 (336)
                      ++++||++|||||+  +|||++++++|+++|++|++++|+....+ ..+++....+..++.++++|++++++++++++++
T Consensus         3 ~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~   81 (266)
T 3oig_A            3 FSLEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEK-SVHELAGTLDRNDSIILPCDVTNDAEIETCFASI   81 (266)
T ss_dssp             SCCTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHH-HHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHH
T ss_pred             cccCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHH-HHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHH
Confidence            57899999999999  66999999999999999999999965444 3444444444458999999999999999999999


Q ss_pred             HhcCCCccEEEEcccCCC------CCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccc
Q 019722          109 HSLNLPLNLLINNAGKFA------HQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWF  182 (336)
Q Consensus       109 ~~~~~~id~lv~nAg~~~------~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~  182 (336)
                      .+.++++|+||||||+..      ...+.+.++|++.+++|+.+++.++++++|.|++       .|+||++||.++..+
T Consensus        82 ~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-------~g~iv~isS~~~~~~  154 (266)
T 3oig_A           82 KEQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTE-------GGSIVTLTYLGGELV  154 (266)
T ss_dssp             HHHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTT-------CEEEEEEECGGGTSC
T ss_pred             HHHhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCC-------CceEEEEeccccccc
Confidence            999999999999999865      2256788999999999999999999999999864       479999999988776


Q ss_pred             cCCcccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchh---HHHHHHH
Q 019722          183 SGDMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGF---ITDLVFF  259 (336)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~---~~~~~~~  259 (336)
                                       .+....|++||++++.|+++++.|+++.|  |+||+|+||+|+|++.+.....   .......
T Consensus       155 -----------------~~~~~~Y~asKaa~~~~~~~la~e~~~~g--i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~  215 (266)
T 3oig_A          155 -----------------MPNYNVMGVAKASLDASVKYLAADLGKEN--IRVNSISAGPIRTLSAKGISDFNSILKDIEER  215 (266)
T ss_dssp             -----------------CTTTHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCCCSGGGTTCTTHHHHHHHHHHH
T ss_pred             -----------------CCCcchhHHHHHHHHHHHHHHHHHHhhcC--cEEEEEecCcccccccccccchHHHHHHHHhc
Confidence                             67788999999999999999999999988  9999999999999998875432   2222333


Q ss_pred             HHHhhcCChHHHHHHHHHHHhcCccccCCceeeccCcccccc
Q 019722          260 LTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWTS  301 (336)
Q Consensus       260 ~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~~  301 (336)
                      .+..+..+|+|+|..++|+++ +...+++|+.+.++|+....
T Consensus       216 ~~~~~~~~p~dva~~v~~l~s-~~~~~~tG~~i~vdGG~~~~  256 (266)
T 3oig_A          216 APLRRTTTPEEVGDTAAFLFS-DMSRGITGENLHVDSGFHIT  256 (266)
T ss_dssp             STTSSCCCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTGGGC
T ss_pred             CCCCCCCCHHHHHHHHHHHcC-CchhcCcCCEEEECCCeEEe
Confidence            344556799999999999997 66789999999999986544

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=100.00  E-value=9.7e-40  Score=291.99  Aligned_cols=246  Identities=20%  Similarity=0.159  Sum_probs=198.8

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHh
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHS  110 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  110 (336)
                      +++.+|++|||||++|||++++++|+++|++|++++|+.....+...+..... +.++.++++|++++++++++++++.+
T Consensus         3 ~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~   81 (264)
T 3i4f_A            3 LGRFVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDV-EERLQFVQADVTKKEDLHKIVEEAMS   81 (264)
T ss_dssp             ---CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGG-GGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             cccccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhc-CCceEEEEecCCCHHHHHHHHHHHHH
Confidence            35678999999999999999999999999999999877655444444433322 46899999999999999999999999


Q ss_pred             cCCCccEEEEcccC--CCC--CCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccc-cccCC
Q 019722          111 LNLPLNLLINNAGK--FAH--QHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHS-WFSGD  185 (336)
Q Consensus       111 ~~~~id~lv~nAg~--~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~-~~~~~  185 (336)
                      .++++|+||||||+  ...  ..+.+.++|++++++|+.+++.++++++|.|++++     .++||++||.... ..+  
T Consensus        82 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-----~g~iv~iss~~~~~~~~--  154 (264)
T 3i4f_A           82 HFGKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQN-----FGRIINYGFQGADSAPG--  154 (264)
T ss_dssp             HHSCCCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-----CEEEEEECCTTGGGCCC--
T ss_pred             HhCCCCEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcC-----CCeEEEEeechhcccCC--
Confidence            99999999999994  322  25678899999999999999999999999998876     5899999997332 211  


Q ss_pred             cccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHH-HHHHHHHhh
Q 019722          186 MIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITD-LVFFLTSKL  264 (336)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~-~~~~~~~~~  264 (336)
                                    .+....|++||++++.|+++++.|+++.|  |+||+|+||+|.|++.+........ .....+..+
T Consensus       155 --------------~~~~~~Y~asKaa~~~~~~~la~e~~~~g--i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~r  218 (264)
T 3i4f_A          155 --------------WIYRSAFAAAKVGLVSLTKTVAYEEAEYG--ITANMVCPGDIIGEMKEATIQEARQLKEHNTPIGR  218 (264)
T ss_dssp             --------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCCCGGGGSCCHHHHHHC--------C
T ss_pred             --------------CCCCchhHHHHHHHHHHHHHHHHHhhhcC--cEEEEEccCCccCccchhccHHHHHHHhhcCCCCC
Confidence                          55678899999999999999999999988  9999999999999998875432222 222345566


Q ss_pred             cCChHHHHHHHHHHHhcCccccCCceeeccCcccccc
Q 019722          265 LKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWTS  301 (336)
Q Consensus       265 ~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~~  301 (336)
                      ..+|+|+|.+++++++ +...+++|+.+.++|+....
T Consensus       219 ~~~~~dva~~v~~l~s-~~~~~itG~~i~vdGG~~~~  254 (264)
T 3i4f_A          219 SGTGEDIARTISFLCE-DDSDMITGTIIEVTGAVDVI  254 (264)
T ss_dssp             CCCHHHHHHHHHHHHS-GGGTTCCSCEEEESCSCCCC
T ss_pred             CcCHHHHHHHHHHHcC-cccCCCCCcEEEEcCceeec
Confidence            7899999999999997 66789999999999986544

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=100.00  E-value=3.2e-40  Score=292.14  Aligned_cols=232  Identities=22%  Similarity=0.259  Sum_probs=200.0

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccC--CCHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDL--SSLSSVRNFVSQ  107 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl--~~~~~v~~~~~~  107 (336)
                      ..+++||++|||||++|||++++++|+++|++|++++|+.+++++..++++... ..++.++.+|+  ++.+++++++++
T Consensus         9 ~~~l~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~d~d~~~~~~~~~~~~~   87 (247)
T 3i1j_A            9 PELLKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAG-QPQPLIIALNLENATAQQYRELAAR   87 (247)
T ss_dssp             TTTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-SCCCEEEECCTTTCCHHHHHHHHHH
T ss_pred             CccCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcC-CCCceEEEeccccCCHHHHHHHHHH
Confidence            457899999999999999999999999999999999999999999888887653 24566777666  999999999999


Q ss_pred             HHhcCCCccEEEEcccCCCC---CCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccC
Q 019722          108 FHSLNLPLNLLINNAGKFAH---QHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSG  184 (336)
Q Consensus       108 ~~~~~~~id~lv~nAg~~~~---~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~  184 (336)
                      +.+.++++|+||||||+...   ..+.+.++|++++++|+.+++.++++++|.|++++     .++||++||..+..+  
T Consensus        88 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-----~~~iv~isS~~~~~~--  160 (247)
T 3i1j_A           88 VEHEFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSE-----DASIAFTSSSVGRKG--  160 (247)
T ss_dssp             HHHHHSCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSS-----SEEEEEECCGGGTSC--
T ss_pred             HHHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-----CCeEEEEcchhhcCC--
Confidence            99999999999999997543   25678899999999999999999999999998764     589999999888766  


Q ss_pred             CcccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHcc-CCCcEEEEEeeCCceeCCCCCccchhHHHHHHHHHHh
Q 019722          185 DMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQ-MEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSK  263 (336)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~-~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~  263 (336)
                                     .++...|++||++++.|+++++.|+.+ .+  |+||+|+||+++|++.+....       .....
T Consensus       161 ---------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~--i~v~~v~PG~v~t~~~~~~~~-------~~~~~  216 (247)
T 3i1j_A          161 ---------------RANWGAYGVSKFATEGLMQTLADELEGVTA--VRANSINPGATRTGMRAQAYP-------DENPL  216 (247)
T ss_dssp             ---------------CTTCHHHHHHHHHHHHHHHHHHHHHTTTSS--EEEEEEECCCCSSHHHHHHST-------TSCGG
T ss_pred             ---------------CCCcchhHHHHHHHHHHHHHHHHHhcCCCC--eEEEEEecCcccCccchhccc-------ccCcc
Confidence                           667789999999999999999999976 56  999999999999998654211       11123


Q ss_pred             hcCChHHHHHHHHHHHhcCccccCCceeecc
Q 019722          264 LLKTIPQGAATTCYVAIHPRLVNVSGKYFAD  294 (336)
Q Consensus       264 ~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~  294 (336)
                      ....|+|++..++|+++ +.+.++||+.+..
T Consensus       217 ~~~~p~dva~~~~~l~s-~~~~~itG~~i~~  246 (247)
T 3i1j_A          217 NNPAPEDIMPVYLYLMG-PDSTGINGQALNA  246 (247)
T ss_dssp             GSCCGGGGTHHHHHHHS-GGGTTCCSCEEEC
T ss_pred             CCCCHHHHHHHHHHHhC-chhccccCeeecC
Confidence            45789999999999997 7789999999864

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=100.00  E-value=2.6e-39  Score=286.70  Aligned_cols=232  Identities=24%  Similarity=0.298  Sum_probs=197.3

Q ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhc
Q 019722           32 NLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSL  111 (336)
Q Consensus        32 ~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  111 (336)
                      +++||++|||||++|||++++++|+++|++|++++|+.+++++..++++..  +.++.++++|++++++++++++++.+.
T Consensus         4 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dv~~~~~~~~~~~~~~~~   81 (247)
T 2jah_A            4 ALQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAA--GAKVHVLELDVADRQGVDAAVASTVEA   81 (247)
T ss_dssp             TTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            488999999999999999999999999999999999999888888887664  568999999999999999999999998


Q ss_pred             CCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcccc
Q 019722          112 NLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRY  189 (336)
Q Consensus       112 ~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~  189 (336)
                      ++++|+||||||+....  .+.+.++|++++++|+.+++.++++++|.|++++      |+||++||..+..+       
T Consensus        82 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~------g~iv~isS~~~~~~-------  148 (247)
T 2jah_A           82 LGGLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSK------GTVVQMSSIAGRVN-------  148 (247)
T ss_dssp             HSCCSEEEECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT------CEEEEECCGGGTCC-------
T ss_pred             cCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC------CEEEEEccHHhcCC-------
Confidence            99999999999976432  5678899999999999999999999999998753      79999999887765       


Q ss_pred             cccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccch-hHHHHHHHHHHhhc--C
Q 019722          190 LGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREG-FITDLVFFLTSKLL--K  266 (336)
Q Consensus       190 ~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~-~~~~~~~~~~~~~~--~  266 (336)
                                .+....|++||++++.|+++++.|+++.|  |+||+|+||+++|++...... .........+ .+.  .
T Consensus       149 ----------~~~~~~Y~asK~a~~~~~~~la~e~~~~g--i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~-~~~~~~  215 (247)
T 2jah_A          149 ----------VRNAAVYQATKFGVNAFSETLRQEVTERG--VRVVVIEPGTTDTELRGHITHTATKEMYEQRI-SQIRKL  215 (247)
T ss_dssp             ----------CTTCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECSBSSSGGGGCCCHHHHHHHHHHT-TTSCCB
T ss_pred             ----------CCCCcHHHHHHHHHHHHHHHHHHHhcccC--cEEEEEECCCCCCcchhcccchhhHHHHHhcc-cccCCC
Confidence                      56778999999999999999999999988  999999999999999765321 1111112222 334  7


Q ss_pred             ChHHHHHHHHHHHhcCccccCCceee
Q 019722          267 TIPQGAATTCYVAIHPRLVNVSGKYF  292 (336)
Q Consensus       267 ~~~~~a~~~~~l~~~~~~~~~~G~~~  292 (336)
                      +|+|+|..++|+++ +...++++...
T Consensus       216 ~pedvA~~v~~l~s-~~~~~~~~~i~  240 (247)
T 2jah_A          216 QAQDIAEAVRYAVT-APHHATVHEIF  240 (247)
T ss_dssp             CHHHHHHHHHHHHH-SCTTEEEEEEE
T ss_pred             CHHHHHHHHHHHhC-CCccCccceEE
Confidence            89999999999998 44556666543

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=4.1e-40  Score=293.33  Aligned_cols=239  Identities=22%  Similarity=0.229  Sum_probs=199.2

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      |++|+||++|||||++|||++++++|+++|++|++++|+.+. ++..+++     . + .++++|++++++++++++++.
T Consensus         1 M~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~-----~-~-~~~~~D~~~~~~~~~~~~~~~   72 (256)
T 2d1y_A            1 MGLFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAEAI-----G-G-AFFQVDLEDERERVRFVEEAA   72 (256)
T ss_dssp             -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHHHHHH-----T-C-EEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH-HHHHHHh-----h-C-CEEEeeCCCHHHHHHHHHHHH
Confidence            457899999999999999999999999999999999999877 5555554     2 4 789999999999999999999


Q ss_pred             hcCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcc
Q 019722          110 SLNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMI  187 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~  187 (336)
                      +.++++|+||||||+....  .+.+.++|++++++|+.+++.++++++|.|++++     .++||++||..+..+     
T Consensus        73 ~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-----~g~iv~isS~~~~~~-----  142 (256)
T 2d1y_A           73 YALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVG-----GGAIVNVASVQGLFA-----  142 (256)
T ss_dssp             HHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTT-----CEEEEEECCGGGTSB-----
T ss_pred             HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-----CcEEEEEccccccCC-----
Confidence            8899999999999976543  5678889999999999999999999999998764     489999999887765     


Q ss_pred             cccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCcc------c-hhHHHHHHHH
Q 019722          188 RYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRER------E-GFITDLVFFL  260 (336)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~------~-~~~~~~~~~~  260 (336)
                                  .+....|++||++++.|+++++.|+++.|  |+||+|+||+++|++....      . ..........
T Consensus       143 ------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~  208 (256)
T 2d1y_A          143 ------------EQENAAYNASKGGLVNLTRSLALDLAPLR--IRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLH  208 (256)
T ss_dssp             ------------CTTBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCHHHHHHHC--------CHHHHTTS
T ss_pred             ------------CCCChhHHHHHHHHHHHHHHHHHHHhhcC--eEEEEEeeCCccCchhhhccccccCCHHHHHHHHhcC
Confidence                        56678899999999999999999999888  9999999999999975431      0 0011111111


Q ss_pred             HHhhcCChHHHHHHHHHHHhcCccccCCceeeccCcccccc
Q 019722          261 TSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWTS  301 (336)
Q Consensus       261 ~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~~  301 (336)
                      +..+...|+|+|..++++++ +...+++|+.+.++|+....
T Consensus       209 ~~~~~~~~~dvA~~~~~l~s-~~~~~~~G~~~~v~gG~~~~  248 (256)
T 2d1y_A          209 ALRRLGKPEEVAEAVLFLAS-EKASFITGAILPVDGGMTAS  248 (256)
T ss_dssp             TTSSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTGGGB
T ss_pred             CCCCCcCHHHHHHHHHHHhC-chhcCCCCCEEEECCCcccc
Confidence            23346789999999999987 56678999999999886543

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.3e-40  Score=297.26  Aligned_cols=245  Identities=21%  Similarity=0.247  Sum_probs=200.0

Q ss_pred             CCCCccccccCCCCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCC
Q 019722           18 GSKSTAEQVTDGCPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSS   97 (336)
Q Consensus        18 ~~~~~~~~~~~~~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~   97 (336)
                      ..+..+-.+.. ++++++|++|||||++|||++++++|+++|++|++++|+.+...           ..++.++++|+++
T Consensus        12 ~~~~~~~~~~~-m~~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~-----------~~~~~~~~~Dv~d   79 (260)
T 3un1_A           12 DLGTENLYFQS-MMRNQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSA-----------DPDIHTVAGDISK   79 (260)
T ss_dssp             --------CHH-HHHTTCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCCS-----------STTEEEEESCTTS
T ss_pred             hhhhhhhhhhh-hhCcCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhcc-----------cCceEEEEccCCC
Confidence            33344444444 67899999999999999999999999999999999999865321           3479999999999


Q ss_pred             HHHHHHHHHHHHhcCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEc
Q 019722           98 LSSVRNFVSQFHSLNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVS  175 (336)
Q Consensus        98 ~~~v~~~~~~~~~~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vs  175 (336)
                      +++++++++++.+.++++|+||||||+....  .+.+.++|++++++|+.|++.++++++|.|++++     .++||++|
T Consensus        80 ~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-----~g~iv~is  154 (260)
T 3un1_A           80 PETADRIVREGIERFGRIDSLVNNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQG-----SGHIVSIT  154 (260)
T ss_dssp             HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-----CEEEEEEC
T ss_pred             HHHHHHHHHHHHHHCCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-----CcEEEEEe
Confidence            9999999999999999999999999986543  5678899999999999999999999999998875     58999999


Q ss_pred             CCccccccCCcccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHH
Q 019722          176 SSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITD  255 (336)
Q Consensus       176 S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~  255 (336)
                      |..+..+.+               ..+...|++||++++.|+++++.|+++.|  |+||+|+||+|+|++....  ....
T Consensus       155 S~~~~~~~~---------------~~~~~~Y~~sKaa~~~l~~~la~e~~~~g--I~vn~v~PG~v~t~~~~~~--~~~~  215 (260)
T 3un1_A          155 TSLVDQPMV---------------GMPSALASLTKGGLNAVTRSLAMEFSRSG--VRVNAVSPGVIKTPMHPAE--THST  215 (260)
T ss_dssp             CTTTTSCBT---------------TCCCHHHHHHHHHHHHHHHHHHHHTTTTT--EEEEEEEECCBCCTTSCGG--GHHH
T ss_pred             chhhccCCC---------------CCccHHHHHHHHHHHHHHHHHHHHhCcCC--eEEEEEeecCCCCCCCCHH--HHHH
Confidence            986653211               34457899999999999999999999888  9999999999999997652  2222


Q ss_pred             HHHHHHHhhcCChHHHHHHHHHHHhcCccccCCceeeccCcccccc
Q 019722          256 LVFFLTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWTS  301 (336)
Q Consensus       256 ~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~~  301 (336)
                      .....+..+...|+|+|.+++|+   +.+.+++|+.+.++|+....
T Consensus       216 ~~~~~p~~r~~~~~dva~av~~L---~~~~~itG~~i~vdGG~~~~  258 (260)
T 3un1_A          216 LAGLHPVGRMGEIRDVVDAVLYL---EHAGFITGEILHVDGGQNAG  258 (260)
T ss_dssp             HHTTSTTSSCBCHHHHHHHHHHH---HHCTTCCSCEEEESTTGGGC
T ss_pred             HhccCCCCCCcCHHHHHHHHHHh---cccCCCCCcEEEECCCeecc
Confidence            22333455677899999999999   34578999999999986543

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=100.00  E-value=1.8e-40  Score=295.31  Aligned_cols=239  Identities=26%  Similarity=0.195  Sum_probs=201.2

Q ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhc
Q 019722           32 NLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSL  111 (336)
Q Consensus        32 ~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  111 (336)
                      +|+||++|||||++|||++++++|+++|++|++++|+.+++++..+++     +.++.++++|++++++++++++++.+.
T Consensus         2 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~   76 (254)
T 1hdc_A            2 DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL-----GDAARYQHLDVTIEEDWQRVVAYAREE   76 (254)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT-----GGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCceeEEEecCCCHHHHHHHHHHHHHH
Confidence            578999999999999999999999999999999999988777665544     357899999999999999999999999


Q ss_pred             CCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcccc
Q 019722          112 NLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRY  189 (336)
Q Consensus       112 ~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~  189 (336)
                      ++++|+||||||+....  .+.+.++|++++++|+.+++.++++++|.|++++     .++||++||..+..+       
T Consensus        77 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-----~g~iv~isS~~~~~~-------  144 (254)
T 1hdc_A           77 FGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAG-----GGSIVNISSAAGLMG-------  144 (254)
T ss_dssp             HSCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-----CEEEEEECCGGGTSC-------
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-----CCEEEEECchhhccC-------
Confidence            99999999999976542  5678899999999999999999999999998865     489999999887765       


Q ss_pred             cccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccch-hHHHHHHHHHHhhcC-C
Q 019722          190 LGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREG-FITDLVFFLTSKLLK-T  267 (336)
Q Consensus       190 ~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~-~~~~~~~~~~~~~~~-~  267 (336)
                                .+....|++||++++.|+++++.|+++.|  |+||+|+||++.|++.+.... .........+..+.. +
T Consensus       145 ----------~~~~~~Y~asK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~p~~~~~~~  212 (254)
T 1hdc_A          145 ----------LALTSSYGASKWGVRGLSKLAAVELGTDR--IRVNSVHPGMTYTPMTAETGIRQGEGNYPNTPMGRVGNE  212 (254)
T ss_dssp             ----------CTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCHHHHHHTCCCSTTSCTTSTTSSCB-C
T ss_pred             ----------CCCchhHHHHHHHHHHHHHHHHHHhhhcC--eEEEEEecccCcCccccccchhHHHHHHhcCCCCCCCCC
Confidence                      56678899999999999999999999888  999999999999997543210 000000111223456 8


Q ss_pred             hHHHHHHHHHHHhcCccccCCceeeccCccccc
Q 019722          268 IPQGAATTCYVAIHPRLVNVSGKYFADCNEAWT  300 (336)
Q Consensus       268 ~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~  300 (336)
                      |+|+|..++++++ +.+.+++|+.+..+|+...
T Consensus       213 ~~dvA~~v~~l~s-~~~~~~tG~~~~vdgG~~~  244 (254)
T 1hdc_A          213 PGEIAGAVVKLLS-DTSSYVTGAELAVDGGWTT  244 (254)
T ss_dssp             HHHHHHHHHHHHS-GGGTTCCSCEEEESTTTTT
T ss_pred             HHHHHHHHHHHhC-chhcCCCCCEEEECCCccc
Confidence            9999999999987 6678999999999988543

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=100.00  E-value=2.7e-40  Score=306.53  Aligned_cols=242  Identities=18%  Similarity=0.232  Sum_probs=201.8

Q ss_pred             CccccccCCCCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHH-------HHHHHHHHHhhCCCCceEEEec
Q 019722           21 STAEQVTDGCPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKA-------AEEAKARLASDCPGSDIVVLPL   93 (336)
Q Consensus        21 ~~~~~~~~~~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~-------~~~~~~~l~~~~~~~~~~~~~~   93 (336)
                      .+..+|....++|+||++|||||++|||++++++|+++|++|++++|+.++       +++..++++..  +.++.++++
T Consensus        31 ~~~~~m~~~~~~l~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~--g~~~~~~~~  108 (346)
T 3kvo_A           31 GRGSAMLPNTGRLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAV--GGKALPCIV  108 (346)
T ss_dssp             -----CCCCCSTTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHT--TCEEEEEEC
T ss_pred             cCCcccCccCCCCCCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhc--CCeEEEEEc
Confidence            334455555788999999999999999999999999999999999999764       45566666554  678999999


Q ss_pred             cCCCHHHHHHHHHHHHhcCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeE
Q 019722           94 DLSSLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRI  171 (336)
Q Consensus        94 Dl~~~~~v~~~~~~~~~~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grI  171 (336)
                      |++|+++++++++++.+.++++|+||||||+....  .+.+.++|++++++|+.+++.++++++|+|++++     .++|
T Consensus       109 Dv~d~~~v~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-----~g~I  183 (346)
T 3kvo_A          109 DVRDEQQISAAVEKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSK-----VAHI  183 (346)
T ss_dssp             CTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCS-----SCEE
T ss_pred             cCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC-----CCEE
Confidence            99999999999999999999999999999976543  6778899999999999999999999999998765     5899


Q ss_pred             EEEcCCccccccCCcccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCc-eeCCCCCccc
Q 019722          172 VNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGI-VRTRLTRERE  250 (336)
Q Consensus       172 V~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~-v~T~~~~~~~  250 (336)
                      |++||..+..+.+               .+....|++||++++.|+++++.|++ .|  |+||+|+||+ +.|++.+...
T Consensus       184 V~iSS~~~~~~~~---------------~~~~~~Y~aSKaal~~l~~~la~e~~-~g--Irvn~v~PG~~i~T~~~~~~~  245 (346)
T 3kvo_A          184 LNISPPLNLNPVW---------------FKQHCAYTIAKYGMSMYVLGMAEEFK-GE--IAVNALWPKTAIHTAAMDMLG  245 (346)
T ss_dssp             EEECCCCCCCGGG---------------TSSSHHHHHHHHHHHHHHHHHHHHTT-TT--CEEEEEECSBCBCCHHHHHHC
T ss_pred             EEECCHHHcCCCC---------------CCCchHHHHHHHHHHHHHHHHHHHhc-CC--cEEEEEeCCCccccHHHHhhc
Confidence            9999988765421               45677899999999999999999999 77  9999999995 8998754321


Q ss_pred             hhHHHHHHHHHHhhcCChHHHHHHHHHHHhcCccccCCceeeccCcc
Q 019722          251 GFITDLVFFLTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNE  297 (336)
Q Consensus       251 ~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~  297 (336)
                      .       ..+..+..+|+|+|.+++++++ + ..+++|+++ ++++
T Consensus       246 ~-------~~~~~r~~~pedvA~~v~~L~s-~-~~~itG~~i-vdgg  282 (346)
T 3kvo_A          246 G-------PGIESQCRKVDIIADAAYSIFQ-K-PKSFTGNFV-IDEN  282 (346)
T ss_dssp             C---------CGGGCBCTHHHHHHHHHHHT-S-CTTCCSCEE-EHHH
T ss_pred             c-------ccccccCCCHHHHHHHHHHHHh-c-CCCCCceEE-ECCc
Confidence            1       2234567899999999999998 5 788999999 4443

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=1.2e-39  Score=293.71  Aligned_cols=245  Identities=22%  Similarity=0.258  Sum_probs=197.3

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhh-CCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASD-CPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      .+|+||++|||||++|||++++++|+++|++|++++|+.+++++..+++... ..+.++.++++|++++++++++++++.
T Consensus         2 ~~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   81 (278)
T 1spx_A            2 TRFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTL   81 (278)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHH
Confidence            4688999999999999999999999999999999999999888877777321 124578999999999999999999999


Q ss_pred             hcCCCccEEEEcccCCCCC--CCC----CchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCcc-ccc
Q 019722          110 SLNLPLNLLINNAGKFAHQ--HAI----SEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIH-SWF  182 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~~~--~~~----~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~-~~~  182 (336)
                      +.++++|+||||||+....  .+.    +.++|++++++|+.+++.++++++|.|++++      |+||++||..+ ..+
T Consensus        82 ~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~------g~iv~isS~~~~~~~  155 (278)
T 1spx_A           82 GKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK------GEIVNISSIASGLHA  155 (278)
T ss_dssp             HHHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT------CEEEEECCTTSSSSC
T ss_pred             HHcCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC------CeEEEEecccccccC
Confidence            9999999999999976432  345    7889999999999999999999999998753      89999999877 544


Q ss_pred             cCCcccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccc----hh------
Q 019722          183 SGDMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRERE----GF------  252 (336)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~----~~------  252 (336)
                                       .+....|++||++++.++++++.|+++.|  |+||+|+||++.|++.....    ..      
T Consensus       156 -----------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~  216 (278)
T 1spx_A          156 -----------------TPDFPYYSIAKAAIDQYTRNTAIDLIQHG--IRVNSISPGLVATGFGSAMGMPEETSKKFYST  216 (278)
T ss_dssp             -----------------CTTSHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECCBCCCC--------------HHH
T ss_pred             -----------------CCCccHHHHHHHHHHHHHHHHHHHHHhcC--cEEEEEecCcccCccccccccCchhhhhhhHH
Confidence                             56677899999999999999999999888  99999999999999875421    11      


Q ss_pred             HHHHHHHHHHhhcCChHHHHHHHHHHHhcCcccc-CCceeeccCcccccc
Q 019722          253 ITDLVFFLTSKLLKTIPQGAATTCYVAIHPRLVN-VSGKYFADCNEAWTS  301 (336)
Q Consensus       253 ~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~-~~G~~~~~~~~~~~~  301 (336)
                      ........+..+..+|+|+|..++++++ +...+ ++|+.+.++|+....
T Consensus       217 ~~~~~~~~p~~~~~~~~dvA~~v~~l~s-~~~~~~~tG~~~~vdgG~~~~  265 (278)
T 1spx_A          217 MATMKECVPAGVMGQPQDIAEVIAFLAD-RKTSSYIIGHQLVVDGGSSLI  265 (278)
T ss_dssp             HHHHHHHCTTSSCBCHHHHHHHHHHHHC-HHHHTTCCSCEEEESTTGGGC
T ss_pred             HHHHHhcCCCcCCCCHHHHHHHHHHHcC-ccccCcccCcEEEECCCcccc
Confidence            1111111223456789999999999987 44555 999999999885543

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=100.00  E-value=4.3e-40  Score=295.09  Aligned_cols=242  Identities=14%  Similarity=0.119  Sum_probs=200.9

Q ss_pred             CCCCCCCEEEEeCCC--ChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGAT--SGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQ  107 (336)
Q Consensus        30 ~~~l~gk~~lItGgs--~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~  107 (336)
                      ..++++|++|||||+  +|||++++++|+++|++|++++|+... .+..+++.+..  .++.++++|+++++++++++++
T Consensus         9 ~~~~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~   85 (271)
T 3ek2_A            9 MGFLDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRF-KDRITEFAAEF--GSELVFPCDVADDAQIDALFAS   85 (271)
T ss_dssp             CCTTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGG-HHHHHHHHHHT--TCCCEEECCTTCHHHHHHHHHH
T ss_pred             ccccCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhh-HHHHHHHHHHc--CCcEEEECCCCCHHHHHHHHHH
Confidence            677999999999999  999999999999999999999998543 34455555553  3588999999999999999999


Q ss_pred             HHhcCCCccEEEEcccCCCC------CCC-CCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccc
Q 019722          108 FHSLNLPLNLLINNAGKFAH------QHA-ISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHS  180 (336)
Q Consensus       108 ~~~~~~~id~lv~nAg~~~~------~~~-~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~  180 (336)
                      +.+.++++|+||||||+...      ..+ .+.++|++++++|+.+++.++++++|.|++       .|+||++||.++.
T Consensus        86 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-------~g~iv~isS~~~~  158 (271)
T 3ek2_A           86 LKTHWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSD-------DASLLTLSYLGAE  158 (271)
T ss_dssp             HHHHCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEE-------EEEEEEEECGGGT
T ss_pred             HHHHcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhcc-------CceEEEEeccccc
Confidence            99999999999999997643      233 788999999999999999999999999864       3799999998887


Q ss_pred             cccCCcccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccch---hHHHHH
Q 019722          181 WFSGDMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREG---FITDLV  257 (336)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~---~~~~~~  257 (336)
                      .+                 .+....|++||++++.|+++++.|+++.|  |+||+|+||+|+|++.+....   ......
T Consensus       159 ~~-----------------~~~~~~Y~asKaa~~~~~~~la~e~~~~g--i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~  219 (271)
T 3ek2_A          159 RA-----------------IPNYNTMGLAKAALEASVRYLAVSLGAKG--VRVNAISAGPIKTLAASGIKSFGKILDFVE  219 (271)
T ss_dssp             SB-----------------CTTTTHHHHHHHHHHHHHHHHHHHHHTTT--CEEEEEEECCC-----CCCHHHHHHHHHHH
T ss_pred             cC-----------------CCCccchhHHHHHHHHHHHHHHHHHHhcC--cEEEEEecCcccchhhhcccchHHHHHHHH
Confidence            66                 66778999999999999999999999888  999999999999999887532   122222


Q ss_pred             HHHHHhhcCChHHHHHHHHHHHhcCccccCCceeeccCcccccc
Q 019722          258 FFLTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWTS  301 (336)
Q Consensus       258 ~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~~  301 (336)
                      ...+..+..+|+|+|..++|+++ +.+.+++|+.+.++|+....
T Consensus       220 ~~~~~~~~~~pedva~~i~~l~s-~~~~~~tG~~i~vdgG~~~~  262 (271)
T 3ek2_A          220 SNSPLKRNVTIEQVGNAGAFLLS-DLASGVTAEVMHVDSGFNAV  262 (271)
T ss_dssp             HHSTTSSCCCHHHHHHHHHHHHS-GGGTTCCSEEEEESTTGGGB
T ss_pred             hcCCcCCCCCHHHHHHHHHHHcC-cccCCeeeeEEEECCCeeee
Confidence            33344566799999999999997 67789999999999986554

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=3.5e-40  Score=294.96  Aligned_cols=237  Identities=22%  Similarity=0.202  Sum_probs=199.3

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      |++|+||++|||||++|||++++++|+++|++|++++|+.+++++..+++     ..++.++++|++|+++++++++++.
T Consensus         1 m~~l~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~v~~~~~~~~   75 (263)
T 2a4k_A            1 MGRLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAAL-----EAEAIAVVADVSDPKAVEAVFAEAL   75 (263)
T ss_dssp             -CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTC-----CSSEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----cCceEEEEcCCCCHHHHHHHHHHHH
Confidence            35689999999999999999999999999999999999988777665543     2578999999999999999999999


Q ss_pred             hcCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcc
Q 019722          110 SLNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMI  187 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~  187 (336)
                      +.++++|+||||||+....  .+.+.++|++++++|+.+++.++++++|.| ++      .|+||++||..+. +     
T Consensus        76 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~-~~------~g~iv~isS~~~~-~-----  142 (263)
T 2a4k_A           76 EEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVL-EE------GGSLVLTGSVAGL-G-----  142 (263)
T ss_dssp             HHHSCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHC-CT------TCEEEEECCCTTC-C-----
T ss_pred             HHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHH-hc------CCEEEEEecchhc-C-----
Confidence            9999999999999976543  567889999999999999999999999999 43      3899999998776 4     


Q ss_pred             cccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhH-HHHHHHHHHhhcC
Q 019722          188 RYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFI-TDLVFFLTSKLLK  266 (336)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~-~~~~~~~~~~~~~  266 (336)
                                  .+....|++||++++.|+++++.|+++.|  |+||+|+||++.|++.+...... .......+..+..
T Consensus       143 ------------~~~~~~Y~asK~a~~~~~~~la~e~~~~g--i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~~~~  208 (263)
T 2a4k_A          143 ------------AFGLAHYAAGKLGVVGLARTLALELARKG--VRVNVLLPGLIQTPMTAGLPPWAWEQEVGASPLGRAG  208 (263)
T ss_dssp             ------------HHHHHHHHHCSSHHHHHHHHHHHHHTTTT--CEEEEEEECSBCCGGGTTSCHHHHHHHHHTSTTCSCB
T ss_pred             ------------CCCcHHHHHHHHHHHHHHHHHHHHhhhhC--cEEEEEEeCcCcCchhhhcCHHHHHHHHhcCCCCCCc
Confidence                        56678999999999999999999999887  99999999999999977643211 1111222334567


Q ss_pred             ChHHHHHHHHHHHhcCccccCCceeeccCcccc
Q 019722          267 TIPQGAATTCYVAIHPRLVNVSGKYFADCNEAW  299 (336)
Q Consensus       267 ~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  299 (336)
                      +|+|+|..++++++ +...+++|+.+..+|+..
T Consensus       209 ~p~dvA~~v~~l~s-~~~~~~tG~~i~vdgG~~  240 (263)
T 2a4k_A          209 RPEEVAQAALFLLS-EESAYITGQALYVDGGRS  240 (263)
T ss_dssp             CHHHHHHHHHHHHS-GGGTTCCSCEEEESTTTT
T ss_pred             CHHHHHHHHHHHhC-ccccCCcCCEEEECCCcc
Confidence            89999999999987 667899999999998754

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=100.00  E-value=6.7e-40  Score=296.16  Aligned_cols=254  Identities=21%  Similarity=0.249  Sum_probs=204.3

Q ss_pred             CCCCCCCccccccCCCCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHH-HHHHHHHHHhhCCCCceEEEec
Q 019722           15 SGYGSKSTAEQVTDGCPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKA-AEEAKARLASDCPGSDIVVLPL   93 (336)
Q Consensus        15 ~~~~~~~~~~~~~~~~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~-~~~~~~~l~~~~~~~~~~~~~~   93 (336)
                      ..+.+...+.++.  .++++||++|||||++|||++++++|+++|++|++++|+.+. .++..+++...  +.++.++++
T Consensus        11 ~~~~~~~~~~~~~--~~~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~   86 (283)
T 1g0o_A           11 SKYDAIPGPLGPQ--SASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKN--GSDAACVKA   86 (283)
T ss_dssp             -CTTCCCSCSSGG--GGCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCCEEEEEC
T ss_pred             cccCCCCCCCCCc--ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHh--CCCeEEEEc
Confidence            3444444333333  567999999999999999999999999999999999998754 45555666554  568999999


Q ss_pred             cCCCHHHHHHHHHHHHhcCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeE
Q 019722           94 DLSSLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRI  171 (336)
Q Consensus        94 Dl~~~~~v~~~~~~~~~~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grI  171 (336)
                      |+++++++.++++++.+.++++|+||||||+....  .+.+.++|++++++|+.+++.++++++|.|.  +     .|+|
T Consensus        87 D~~~~~~~~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~--~-----~g~i  159 (283)
T 1g0o_A           87 NVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLE--I-----GGRL  159 (283)
T ss_dssp             CTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSC--T-----TCEE
T ss_pred             CCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHh--c-----CCeE
Confidence            99999999999999999899999999999976543  5678899999999999999999999999992  1     4899


Q ss_pred             EEEcCCccccccCCcccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccch
Q 019722          172 VNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREG  251 (336)
Q Consensus       172 V~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~  251 (336)
                      |++||..+..+.                .+....|++||++++.|+++++.|+++.|  |+||+|+||++.|++......
T Consensus       160 v~isS~~~~~~~----------------~~~~~~Y~asK~a~~~~~~~la~e~~~~g--i~v~~v~PG~v~t~~~~~~~~  221 (283)
T 1g0o_A          160 ILMGSITGQAKA----------------VPKHAVYSGSKGAIETFARCMAIDMADKK--ITVNVVAPGGIKTDMYHAVCR  221 (283)
T ss_dssp             EEECCGGGTCSS----------------CSSCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECCBSSHHHHHHGG
T ss_pred             EEEechhhccCC----------------CCCCcchHHHHHHHHHHHHHHHHHhcccC--eEEEEEecCcccchhhhhhhh
Confidence            999998776541                22367899999999999999999999888  999999999999998554210


Q ss_pred             h--------HHHHHHH------HHHhhcCChHHHHHHHHHHHhcCccccCCceeeccCccc
Q 019722          252 F--------ITDLVFF------LTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEA  298 (336)
Q Consensus       252 ~--------~~~~~~~------~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  298 (336)
                      .        .......      .+..+...|+|+|..++|+++ +.+.+++|+.+.++|+.
T Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s-~~~~~itG~~i~vdgG~  281 (283)
T 1g0o_A          222 EYIPNGENLSNEEVDEYAAVQWSPLRRVGLPIDIARVVCFLAS-NDGGWVTGKVIGIDGGA  281 (283)
T ss_dssp             GGSTTCTTCCHHHHHHHHHHHSCTTCSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTC
T ss_pred             hccccccccCHHHHHHHHhhcCCCCCCCcCHHHHHHHHHHHhC-ccccCcCCCEEEeCCCc
Confidence            0        0111111      123446789999999999997 66789999999998874

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=100.00  E-value=2.1e-39  Score=287.38  Aligned_cols=236  Identities=23%  Similarity=0.320  Sum_probs=189.6

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      ..++++|++|||||++|||++++++|+++|++|++++|+.+++++..+++     ..++.++.+|+++.+++.+++++  
T Consensus         9 ~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~--   81 (249)
T 3f9i_A            9 MIDLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNAL-----KDNYTIEVCNLANKEECSNLISK--   81 (249)
T ss_dssp             CCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----CSSEEEEECCTTSHHHHHHHHHT--
T ss_pred             cccCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh-----ccCccEEEcCCCCHHHHHHHHHh--
Confidence            67899999999999999999999999999999999999999888877766     35789999999999999888764  


Q ss_pred             hcCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcc
Q 019722          110 SLNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMI  187 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~  187 (336)
                        .+++|+||||||+....  .+.+.++|++++++|+.+++.++++++|.|.+++     .|+||++||..+..+     
T Consensus        82 --~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-----~g~iv~isS~~~~~~-----  149 (249)
T 3f9i_A           82 --TSNLDILVCNAGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKR-----YGRIINISSIVGIAG-----  149 (249)
T ss_dssp             --CSCCSEEEECCC-------------CHHHHHHHHTHHHHHHHHHHHHHHHHHT-----CEEEEEECCCCC--C-----
T ss_pred             --cCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-----CcEEEEEccHHhccC-----
Confidence              46899999999976543  5667889999999999999999999999998875     589999999988766     


Q ss_pred             cccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhH-HHHHHHHHHhhcC
Q 019722          188 RYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFI-TDLVFFLTSKLLK  266 (336)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~-~~~~~~~~~~~~~  266 (336)
                                  .++...|++||++++.|+++++.|+++.|  |+||+|+||+|.|++.+...... .......+..+..
T Consensus       150 ------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~  215 (249)
T 3f9i_A          150 ------------NPGQANYCASKAGLIGMTKSLSYEVATRG--ITVNAVAPGFIKSDMTDKLNEKQREAIVQKIPLGTYG  215 (249)
T ss_dssp             ------------CSCSHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCBC------CCHHHHHHHHHHCTTCSCB
T ss_pred             ------------CCCCchhHHHHHHHHHHHHHHHHHHHHcC--cEEEEEecCccccCcccccCHHHHHHHHhcCCCCCCc
Confidence                        66778999999999999999999999888  99999999999999988764332 2222333445667


Q ss_pred             ChHHHHHHHHHHHhcCccccCCceeeccCcccc
Q 019722          267 TIPQGAATTCYVAIHPRLVNVSGKYFADCNEAW  299 (336)
Q Consensus       267 ~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  299 (336)
                      .|+|+|.+++++++ +...+++|+.+..+|+..
T Consensus       216 ~~~dva~~~~~l~s-~~~~~~tG~~~~vdgG~~  247 (249)
T 3f9i_A          216 IPEDVAYAVAFLAS-NNASYITGQTLHVNGGML  247 (249)
T ss_dssp             CHHHHHHHHHHHHS-GGGTTCCSCEEEESTTSS
T ss_pred             CHHHHHHHHHHHcC-CccCCccCcEEEECCCEe
Confidence            89999999999997 667889999999988753

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=100.00  E-value=9.6e-40  Score=291.33  Aligned_cols=240  Identities=22%  Similarity=0.229  Sum_probs=202.3

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHH---CCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHH
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAK---RGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQ  107 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~---~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~  107 (336)
                      ++|+||++|||||++|||++++++|++   +|++|++++|+.+.+++..++++..+++.++.++++|+++++++++++++
T Consensus         2 ~~l~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   81 (259)
T 1oaa_A            2 DGLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSA   81 (259)
T ss_dssp             CCCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHH
Confidence            568999999999999999999999999   89999999999999988888887765567899999999999999999999


Q ss_pred             HHh--cCCCcc--EEEEcccCCCC----CCC-CCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCc
Q 019722          108 FHS--LNLPLN--LLINNAGKFAH----QHA-ISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSI  178 (336)
Q Consensus       108 ~~~--~~~~id--~lv~nAg~~~~----~~~-~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~  178 (336)
                      +.+  .++++|  +||||||+...    ..+ .+.++|++++++|+.|++.++++++|.|+++.   +..|+||++||..
T Consensus        82 ~~~~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~---~~~g~iv~isS~~  158 (259)
T 1oaa_A           82 VRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSP---GLSKTVVNISSLC  158 (259)
T ss_dssp             HHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCT---TCEEEEEEECCGG
T ss_pred             HHhccccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc---CCCceEEEEcCch
Confidence            988  678899  99999997542    234 57899999999999999999999999997640   0148999999998


Q ss_pred             cccccCCcccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccc------hh
Q 019722          179 HSWFSGDMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRERE------GF  252 (336)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~------~~  252 (336)
                      +..+                 .++...|++||++++.|+++++.|++  +  |+||+|+||+++|++.+...      ..
T Consensus       159 ~~~~-----------------~~~~~~Y~asKaa~~~~~~~la~e~~--~--i~vn~v~PG~v~T~~~~~~~~~~~~~~~  217 (259)
T 1oaa_A          159 ALQP-----------------YKGWGLYCAGKAARDMLYQVLAAEEP--S--VRVLSYAPGPLDNDMQQLARETSKDPEL  217 (259)
T ss_dssp             GTSC-----------------CTTCHHHHHHHHHHHHHHHHHHHHCT--T--EEEEEEECCSBSSHHHHHHHHHCSCHHH
T ss_pred             hcCC-----------------CCCccHHHHHHHHHHHHHHHHHhhCC--C--ceEEEecCCCcCcchHHHHhhccCChhH
Confidence            7765                 66778999999999999999999986  3  99999999999999865421      11


Q ss_pred             HHHHHHHHHHhhcCChHHHHHHHHHHHhcCccccCCceeeccCc
Q 019722          253 ITDLVFFLTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCN  296 (336)
Q Consensus       253 ~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~  296 (336)
                      ........+..+..+|+|+|..++++++ + ..+++|+.+.+++
T Consensus       218 ~~~~~~~~p~~~~~~p~dvA~~v~~l~~-~-~~~itG~~i~vdg  259 (259)
T 1oaa_A          218 RSKLQKLKSDGALVDCGTSAQKLLGLLQ-K-DTFQSGAHVDFYD  259 (259)
T ss_dssp             HHHHHHHHHTTCSBCHHHHHHHHHHHHH-H-CCSCTTEEEETTC
T ss_pred             HHHHHHhhhcCCcCCHHHHHHHHHHHHh-h-ccccCCcEEeccC
Confidence            1122223344567899999999999997 3 5789999998764

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=100.00  E-value=5.5e-40  Score=292.29  Aligned_cols=239  Identities=26%  Similarity=0.234  Sum_probs=199.4

Q ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhc
Q 019722           32 NLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSL  111 (336)
Q Consensus        32 ~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  111 (336)
                      +|+||++|||||++|||++++++|+++|++|++++|+.+  ++..+++...  +.++.++++|++|+++++++++++.+.
T Consensus         1 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~--~~~~~~l~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~~   76 (255)
T 2q2v_A            1 TLKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDP--APALAEIARH--GVKAVHHPADLSDVAQIEALFALAERE   76 (255)
T ss_dssp             CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCC--HHHHHHHHTT--SCCEEEECCCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCch--HHHHHHHHhc--CCceEEEeCCCCCHHHHHHHHHHHHHH
Confidence            478999999999999999999999999999999999876  4455555543  467899999999999999999999999


Q ss_pred             CCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcccc
Q 019722          112 NLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRY  189 (336)
Q Consensus       112 ~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~  189 (336)
                      ++++|+||||||+....  .+.+.++|++++++|+.+++.++++++|.|++++     .++||++||..+..+       
T Consensus        77 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-----~g~iv~isS~~~~~~-------  144 (255)
T 2q2v_A           77 FGGVDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARN-----WGRIINIASVHGLVG-------  144 (255)
T ss_dssp             HSSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-----CEEEEEECCGGGTSC-------
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-----CcEEEEEcCchhccC-------
Confidence            99999999999976532  5678899999999999999999999999998765     489999999887665       


Q ss_pred             cccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHH---H----HHH--
Q 019722          190 LGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDL---V----FFL--  260 (336)
Q Consensus       190 ~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~---~----~~~--  260 (336)
                                .+....|++||++++.|+++++.|+++.|  |+||+|+||++.|++.+.........   .    ..+  
T Consensus       145 ----------~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~  212 (255)
T 2q2v_A          145 ----------STGKAAYVAAKHGVVGLTKVVGLETATSN--VTCNAICPGWVLTPLVQKQIDDRAANGGDPLQAQHDLLA  212 (255)
T ss_dssp             ----------CTTBHHHHHHHHHHHHHHHHHHHHTTTSS--EEEEEEEESSBCCHHHHHHHHHHHHHTCCHHHHHHHHHT
T ss_pred             ----------CCCchhHHHHHHHHHHHHHHHHHHhcccC--cEEEEEeeCCCcCcchhhhcccccccccchHHHHHHHHh
Confidence                      56678899999999999999999999887  99999999999999865421100111   0    111  


Q ss_pred             ---HHhhcCChHHHHHHHHHHHhcCccccCCceeeccCcccc
Q 019722          261 ---TSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAW  299 (336)
Q Consensus       261 ---~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  299 (336)
                         +..+...|+|+|..++++++ +...+++|+.+.++|+..
T Consensus       213 ~~~p~~~~~~~~dvA~~~~~l~s-~~~~~~tG~~~~vdgG~~  253 (255)
T 2q2v_A          213 EKQPSLAFVTPEHLGELVLFLCS-EAGSQVRGAAWNVDGGWL  253 (255)
T ss_dssp             TTCTTCCCBCHHHHHHHHHHHTS-GGGTTCCSCEEEESTTGG
T ss_pred             ccCCCCCCcCHHHHHHHHHHHhC-CccCCCCCCEEEECCCcc
Confidence               22345689999999999987 666889999999988743

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=100.00  E-value=1.6e-39  Score=292.43  Aligned_cols=245  Identities=18%  Similarity=0.145  Sum_probs=197.1

Q ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeC-ChHHHHHHHHHHHhhCCCCceEEEeccCCCH----HHHHHHHH
Q 019722           32 NLSSVTAIITGATSGIGAETARVLAKRGARLVLPAR-SLKAAEEAKARLASDCPGSDIVVLPLDLSSL----SSVRNFVS  106 (336)
Q Consensus        32 ~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~----~~v~~~~~  106 (336)
                      +|+||++|||||++|||++++++|+++|++|++++| +.+.+++..++++... +.++.++++|++++    ++++++++
T Consensus         8 ~~~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~   86 (276)
T 1mxh_A            8 ASECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAAR-AGSAVLCKGDLSLSSSLLDCCEDIID   86 (276)
T ss_dssp             ---CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHS-TTCEEEEECCCSSSTTHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhc-CCceEEEeccCCCccccHHHHHHHHH
Confidence            478999999999999999999999999999999999 9888888888876543 35799999999999    99999999


Q ss_pred             HHHhcCCCccEEEEcccCCCCC--CCCCc-----------hhhhhHHHHHHhHHHHHHHHHHHHHHHhhc-cCCCCCeEE
Q 019722          107 QFHSLNLPLNLLINNAGKFAHQ--HAISE-----------DGIEMTFATNYLGHFLLTKLLLKKMIETAK-ATGIQGRIV  172 (336)
Q Consensus       107 ~~~~~~~~id~lv~nAg~~~~~--~~~~~-----------~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~-~~~~~grIV  172 (336)
                      ++.+.++++|+||||||+....  .+.+.           ++|++++++|+.+++.++++++|.|. ++. ....+++||
T Consensus        87 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~-~~~~~~~~~g~iv  165 (276)
T 1mxh_A           87 CSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQG-EGGAWRSRNLSVV  165 (276)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC--------CCCEEEE
T ss_pred             HHHHhcCCCCEEEECCCCCCCCCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHh-cCCCCCCCCcEEE
Confidence            9999899999999999976432  45566           89999999999999999999999987 320 011127999


Q ss_pred             EEcCCccccccCCcccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccch-
Q 019722          173 NVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREG-  251 (336)
Q Consensus       173 ~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~-  251 (336)
                      ++||..+..+                 .++...|++||++++.|+++++.|+++.|  |+||+|+||++.|+ . .... 
T Consensus       166 ~isS~~~~~~-----------------~~~~~~Y~asK~a~~~l~~~la~e~~~~g--i~v~~v~PG~v~t~-~-~~~~~  224 (276)
T 1mxh_A          166 NLCDAMTDLP-----------------LPGFCVYTMAKHALGGLTRAAALELAPRH--IRVNAVAPGLSLLP-P-AMPQE  224 (276)
T ss_dssp             EECCGGGGSC-----------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEESSBSCC-S-SSCHH
T ss_pred             EECchhhcCC-----------------CCCCeehHHHHHHHHHHHHHHHHHHhhcC--eEEEEEecCcccCC-c-cCCHH
Confidence            9999887765                 66778999999999999999999999988  99999999999999 2 2221 


Q ss_pred             hHHHHHHHHHHhh-cCChHHHHHHHHHHHhcCccccCCceeeccCccccc
Q 019722          252 FITDLVFFLTSKL-LKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWT  300 (336)
Q Consensus       252 ~~~~~~~~~~~~~-~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~  300 (336)
                      .........+..+ ..+|+|+|..++++++ +...+++|+.+.++|+...
T Consensus       225 ~~~~~~~~~p~~r~~~~~~dva~~v~~l~s-~~~~~~tG~~~~vdgG~~~  273 (276)
T 1mxh_A          225 TQEEYRRKVPLGQSEASAAQIADAIAFLVS-KDAGYITGTTLKVDGGLIL  273 (276)
T ss_dssp             HHHHHHTTCTTTSCCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTGGG
T ss_pred             HHHHHHhcCCCCCCCCCHHHHHHHHHHHhC-ccccCccCcEEEECCchhc
Confidence            1111111222334 6789999999999987 6678999999999987543

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=100.00  E-value=1.4e-39  Score=290.83  Aligned_cols=240  Identities=24%  Similarity=0.287  Sum_probs=200.7

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      +++|+||++|||||++|||++++++|+++|++|++++|+.+++++..+++     ..++.++++|++|+++++++++++.
T Consensus         7 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~d~~~v~~~~~~~~   81 (263)
T 3ak4_A            7 IFDLSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGL-----ENGGFAVEVDVTKRASVDAAMQKAI   81 (263)
T ss_dssp             TTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTC-----TTCCEEEECCTTCHHHHHHHHHHHH
T ss_pred             CcCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH-----hcCCeEEEEeCCCHHHHHHHHHHHH
Confidence            56789999999999999999999999999999999999988776655443     2268899999999999999999999


Q ss_pred             hcCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcc
Q 019722          110 SLNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMI  187 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~  187 (336)
                      +.++++|+||||||+....  .+.+.++|++.+++|+.+++.+++++.|.|++++.    .++||++||..+..+     
T Consensus        82 ~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~----~g~iv~isS~~~~~~-----  152 (263)
T 3ak4_A           82 DALGGFDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNT----KGVIVNTASLAAKVG-----  152 (263)
T ss_dssp             HHHTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTC----CCEEEEECCGGGTSC-----
T ss_pred             HHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC----CeEEEEecccccccC-----
Confidence            9999999999999976532  56788999999999999999999999999987531    389999999877655     


Q ss_pred             cccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchh---H-----HHHHHH
Q 019722          188 RYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGF---I-----TDLVFF  259 (336)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~---~-----~~~~~~  259 (336)
                                  .+....|++||++++.++++++.|+++.|  |+||+|+||+++|++.......   .     ......
T Consensus       153 ------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~  218 (263)
T 3ak4_A          153 ------------APLLAHYSASKFAVFGWTQALAREMAPKN--IRVNCVCPGFVKTAMQEREIIWEAELRGMTPEAVRAE  218 (263)
T ss_dssp             ------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECSBTTHHHHHHHHHHHHHHTSCHHHHHHH
T ss_pred             ------------CCCchhHHHHHHHHHHHHHHHHHHHhHcC--eEEEEEecccccChhhhhhccccccccccCcHHHHHH
Confidence                        55677899999999999999999999888  9999999999999986542100   0     111111


Q ss_pred             ----HHHhhcCChHHHHHHHHHHHhcCccccCCceeeccCccc
Q 019722          260 ----LTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEA  298 (336)
Q Consensus       260 ----~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  298 (336)
                          .+..+...|+|+|..++++++ +.+.+++|+.+..+|+.
T Consensus       219 ~~~~~p~~~~~~~~dvA~~v~~l~s-~~~~~~tG~~~~vdgG~  260 (263)
T 3ak4_A          219 YVSLTPLGRIEEPEDVADVVVFLAS-DAARFMTGQGINVTGGV  260 (263)
T ss_dssp             HHHTCTTCSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESSSS
T ss_pred             HHhcCCCCCCcCHHHHHHHHHHHhC-ccccCCCCCEEEECcCE
Confidence                123346789999999999987 66788999999998874

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=100.00  E-value=4.6e-39  Score=285.53  Aligned_cols=233  Identities=20%  Similarity=0.167  Sum_probs=186.1

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      .|+|+||++|||||++|||++++++|+++|++|++++|+.+.         .   ...+.++.+|++|+++++++++++.
T Consensus         2 ~m~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~---------~---~~~~~~~~~D~~d~~~~~~~~~~~~   69 (250)
T 2fwm_X            2 HMDFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQ---------E---QYPFATEVMDVADAAQVAQVCQRLL   69 (250)
T ss_dssp             -CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCS---------S---CCSSEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhh---------h---cCCceEEEcCCCCHHHHHHHHHHHH
Confidence            467899999999999999999999999999999999998651         1   1138889999999999999999999


Q ss_pred             hcCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcc
Q 019722          110 SLNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMI  187 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~  187 (336)
                      +.++++|+||||||+....  .+.+.++|++++++|+.+++.++++++|.|++++     .++||++||..+..+     
T Consensus        70 ~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-----~g~iv~isS~~~~~~-----  139 (250)
T 2fwm_X           70 AETERLDALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQR-----GGAIVTVASDAAHTP-----  139 (250)
T ss_dssp             HHCSCCCEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-----CCEEEEECCGGGTSC-----
T ss_pred             HHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcC-----CCEEEEECchhhCCC-----
Confidence            9999999999999976532  5678899999999999999999999999998865     589999999887665     


Q ss_pred             cccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccc--hh-HH-HHHH-----
Q 019722          188 RYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRERE--GF-IT-DLVF-----  258 (336)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~--~~-~~-~~~~-----  258 (336)
                                  .+....|++||++++.|+++++.|+++.|  |+||+|+||+++|++.+...  .. .. ....     
T Consensus       140 ------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~  205 (250)
T 2fwm_X          140 ------------RIGMSAYGASKAALKSLALSVGLELAGSG--VRCNVVSPGSTDTDMQRTLWVSDDAEEQRIRGFGEQF  205 (250)
T ss_dssp             ------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECCC--------------------------
T ss_pred             ------------CCCCchHHHHHHHHHHHHHHHHHHhCccC--CEEEEEECCcccCccccccccChhHHHHHHhhhhhcc
Confidence                        56678899999999999999999999888  99999999999999876431  10 11 1111     


Q ss_pred             --HHHHhhcCChHHHHHHHHHHHhcCccccCCceeeccCcccc
Q 019722          259 --FLTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAW  299 (336)
Q Consensus       259 --~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  299 (336)
                        ..+..+..+|+|+|..++++++ +.+.+++|+.+.++|+..
T Consensus       206 ~~~~p~~~~~~p~dvA~~v~~l~s-~~~~~~tG~~i~vdGG~~  247 (250)
T 2fwm_X          206 KLGIPLGKIARPQEIANTILFLAS-DLASHITLQDIVVDGGST  247 (250)
T ss_dssp             ----------CHHHHHHHHHHHHS-GGGTTCCSCEEEESTTTT
T ss_pred             cccCCCCCCcCHHHHHHHHHHHhC-ccccCCCCCEEEECCCcc
Confidence              2334557799999999999987 667899999999998753

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=100.00  E-value=1.7e-39  Score=289.89  Aligned_cols=239  Identities=23%  Similarity=0.266  Sum_probs=194.5

Q ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhc
Q 019722           32 NLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSL  111 (336)
Q Consensus        32 ~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  111 (336)
                      +|+||++|||||++|||++++++|+++|++|++++|+.+++++..++++..  +.++.++++|++++++++++++++.+.
T Consensus         2 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~   79 (260)
T 2qq5_A            2 PMNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSL--GGQCVPVVCDSSQESEVRSLFEQVDRE   79 (260)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH--SSEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHc--CCceEEEECCCCCHHHHHHHHHHHHHh
Confidence            478999999999999999999999999999999999999888888888765  568999999999999999999999876


Q ss_pred             -CCCccEEEEccc--CC-------CCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCcccc
Q 019722          112 -NLPLNLLINNAG--KF-------AHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSW  181 (336)
Q Consensus       112 -~~~id~lv~nAg--~~-------~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~  181 (336)
                       ++++|+||||||  +.       .+..+.+.++|++++++|+.+++.++++++|.|.+++     .|+||++||..+..
T Consensus        80 ~~g~id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-----~g~iv~isS~~~~~  154 (260)
T 2qq5_A           80 QQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAG-----QGLIVVISSPGSLQ  154 (260)
T ss_dssp             HTTCCCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGGT-----CCEEEEECCGGGTS
T ss_pred             cCCCceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhcC-----CcEEEEEcChhhcC
Confidence             899999999995  32       2235678889999999999999999999999998764     58999999987654


Q ss_pred             ccCCcccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhH----HHHH
Q 019722          182 FSGDMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFI----TDLV  257 (336)
Q Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~----~~~~  257 (336)
                      +                  .....|++||++++.|+++++.|+++.|  |+||+|+||+|+|++.+......    ....
T Consensus       155 ~------------------~~~~~Y~asK~a~~~~~~~la~e~~~~g--i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~  214 (260)
T 2qq5_A          155 Y------------------MFNVPYGVGKAACDKLAADCAHELRRHG--VSCVSLWPGIVQTELLKEHMAKEEVLQDPVL  214 (260)
T ss_dssp             C------------------CSSHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEECCCSCTTTC---------------
T ss_pred             C------------------CCCCchHHHHHHHHHHHHHHHHHhccCC--eEEEEEecCccccHHHHHhhccccccchhHH
Confidence            2                  2246899999999999999999999888  99999999999999976532110    0001


Q ss_pred             H--HHHHhhcCChHHHHHHHHHHHhcCccccCCceeeccCcc
Q 019722          258 F--FLTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNE  297 (336)
Q Consensus       258 ~--~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~  297 (336)
                      .  ..+..+..+|+|+|..++|+++.+...++||+++..++.
T Consensus       215 ~~~~~~~~~~~~pe~va~~v~~l~s~~~~~~itG~~i~~~~~  256 (260)
T 2qq5_A          215 KQFKSAFSSAETTELSGKCVVALATDPNILSLSGKVLPSCDL  256 (260)
T ss_dssp             -------CHHHHHHHHHHHHHHHHTCTTGGGGTTCEEEHHHH
T ss_pred             HHHHhhhccCCCHHHHHHHHHHHhcCcccccccceeechhhh
Confidence            1  111223457999999999999854446899999977653

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=100.00  E-value=3.3e-39  Score=289.08  Aligned_cols=228  Identities=20%  Similarity=0.233  Sum_probs=192.1

Q ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhc
Q 019722           32 NLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSL  111 (336)
Q Consensus        32 ~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  111 (336)
                      ++.+|++|||||++|||++++++|+++|++|++++|+.+++++..        ..++.++++|++|+++++++++++.+.
T Consensus        13 ~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~--------~~~~~~~~~Dv~d~~~v~~~~~~~~~~   84 (266)
T 3p19_A           13 GSMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKALN--------LPNTLCAQVDVTDKYTFDTAITRAEKI   84 (266)
T ss_dssp             --CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHTTC--------CTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHhh--------cCCceEEEecCCCHHHHHHHHHHHHHH
Confidence            578999999999999999999999999999999999977654321        347899999999999999999999999


Q ss_pred             CCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcccc
Q 019722          112 NLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRY  189 (336)
Q Consensus       112 ~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~  189 (336)
                      ++++|+||||||+....  .+.+.++|++++++|+.|++.++++++|.|++++     .|+||++||.++..+       
T Consensus        85 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-----~g~IV~isS~~~~~~-------  152 (266)
T 3p19_A           85 YGPADAIVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARN-----CGTIINISSIAGKKT-------  152 (266)
T ss_dssp             HCSEEEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-----CCEEEEECCGGGTSC-------
T ss_pred             CCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-----CcEEEEEcChhhCCC-------
Confidence            99999999999976543  5678899999999999999999999999998876     589999999988766       


Q ss_pred             cccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchh-HHHHH-H-HHHHhhcC
Q 019722          190 LGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGF-ITDLV-F-FLTSKLLK  266 (336)
Q Consensus       190 ~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~-~~~~~-~-~~~~~~~~  266 (336)
                                .++...|++||+++++|+++++.|+++.|  |+||+|+||+|+|++....... ..... . ..+..+..
T Consensus       153 ----------~~~~~~Y~asK~a~~~~~~~la~e~~~~g--i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~r~~  220 (266)
T 3p19_A          153 ----------FPDHAAYCGTKFAVHAISENVREEVAASN--VRVMTIAPSAVKTELLSHTTSQQIKDGYDAWRVDMGGVL  220 (266)
T ss_dssp             ----------CTTCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECSBSSSGGGGCSCHHHHHHHHHHHHHTTCCB
T ss_pred             ----------CCCCchHHHHHHHHHHHHHHHHHHhcccC--cEEEEEeeCccccchhhcccchhhhHHHHhhcccccCCC
Confidence                      67788999999999999999999999988  9999999999999998765321 11111 1 22445678


Q ss_pred             ChHHHHHHHHHHHhcCccccCCceee
Q 019722          267 TIPQGAATTCYVAIHPRLVNVSGKYF  292 (336)
Q Consensus       267 ~~~~~a~~~~~l~~~~~~~~~~G~~~  292 (336)
                      .|+|+|.+++|+++.+.. .+.++.+
T Consensus       221 ~pedvA~av~~l~~~~~~-~~~~~i~  245 (266)
T 3p19_A          221 AADDVARAVLFAYQQPQN-VCIREIA  245 (266)
T ss_dssp             CHHHHHHHHHHHHHSCTT-EEEEEEE
T ss_pred             CHHHHHHHHHHHHcCCCC-ccceeeE
Confidence            999999999999996654 3444444

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=100.00  E-value=7.9e-40  Score=290.98  Aligned_cols=239  Identities=21%  Similarity=0.233  Sum_probs=201.3

Q ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhc
Q 019722           32 NLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSL  111 (336)
Q Consensus        32 ~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  111 (336)
                      +|+||++|||||++|||++++++|+++|++|++++|+.+++++..+++     +.++.++++|++++++++++++++.+.
T Consensus         3 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~v~~~~~~~~~~   77 (253)
T 1hxh_A            3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL-----GERSMFVRHDVSSEADWTLVMAAVQRR   77 (253)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH-----CTTEEEECCCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc-----CCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            588999999999999999999999999999999999998887776665     457999999999999999999999999


Q ss_pred             CCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcccc
Q 019722          112 NLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRY  189 (336)
Q Consensus       112 ~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~  189 (336)
                      ++++|+||||||+....  .+.+.++|++++++|+.+++.++++++|.|+++      +++||++||..+..+       
T Consensus        78 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~------~g~iv~isS~~~~~~-------  144 (253)
T 1hxh_A           78 LGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKET------GGSIINMASVSSWLP-------  144 (253)
T ss_dssp             HCSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT------CEEEEEECCGGGTSC-------
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHc------CCEEEEEcchhhcCC-------
Confidence            99999999999976532  567889999999999999999999999999764      279999999887765       


Q ss_pred             cccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCcc-c-hhHHH-HHH---HHHHh
Q 019722          190 LGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRER-E-GFITD-LVF---FLTSK  263 (336)
Q Consensus       190 ~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~-~-~~~~~-~~~---~~~~~  263 (336)
                                .+....|++||++++.|+++++.|+++.+.+|+||+|+||++.|++.... . ..... ...   ..+..
T Consensus       145 ----------~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~  214 (253)
T 1hxh_A          145 ----------IEQYAGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKGVSKEMVLHDPKLNRAG  214 (253)
T ss_dssp             ----------CTTBHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCTTCCHHHHBCBTTTBTTC
T ss_pred             ----------CCCCccHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEEeCCccCchhhhccchhhhHHHHhhhhccCccC
Confidence                      56678899999999999999999999882239999999999999986531 1 11111 111   11223


Q ss_pred             hcCChHHHHHHHHHHHhcCccccCCceeeccCcccc
Q 019722          264 LLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAW  299 (336)
Q Consensus       264 ~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  299 (336)
                      +..+|+|+|..++++++ +.+.+++|+.+..+|+..
T Consensus       215 ~~~~~~dvA~~~~~l~s-~~~~~~tG~~~~vdgG~~  249 (253)
T 1hxh_A          215 RAYMPERIAQLVLFLAS-DESSVMSGSELHADNSIL  249 (253)
T ss_dssp             CEECHHHHHHHHHHHHS-GGGTTCCSCEEEESSSCT
T ss_pred             CCCCHHHHHHHHHHHcC-ccccCCCCcEEEECCCcc
Confidence            45689999999999987 667899999999998743

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=100.00  E-value=3.6e-39  Score=287.89  Aligned_cols=236  Identities=23%  Similarity=0.244  Sum_probs=201.1

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHh
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHS  110 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  110 (336)
                      .+|+||++|||||++|||++++++|+++|++|++++|+.+++++..+++.     .++.++++|++++++++++++++.+
T Consensus         3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~D~~~~~~v~~~~~~~~~   77 (260)
T 1nff_A            3 GRLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELA-----DAARYVHLDVTQPAQWKAAVDTAVT   77 (260)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTG-----GGEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhh-----cCceEEEecCCCHHHHHHHHHHHHH
Confidence            35889999999999999999999999999999999999988777666553     2588999999999999999999999


Q ss_pred             cCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccc
Q 019722          111 LNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIR  188 (336)
Q Consensus       111 ~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~  188 (336)
                      .++++|+||||||+....  .+.+.++|++++++|+.+++.++++++|.|++++     .++||++||..+..+      
T Consensus        78 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-----~g~iv~isS~~~~~~------  146 (260)
T 1nff_A           78 AFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAG-----RGSIINISSIEGLAG------  146 (260)
T ss_dssp             HHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-----CEEEEEECCGGGTSC------
T ss_pred             HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-----CCEEEEEeehhhcCC------
Confidence            999999999999976542  5678899999999999999999999999998865     489999999887665      


Q ss_pred             ccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHHHHHHHHhhcCCh
Q 019722          189 YLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSKLLKTI  268 (336)
Q Consensus       189 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~  268 (336)
                                 .++...|++||++++.++++++.|+++.|  |+||+|+||++.|++.+.....   . ...+..+..+|
T Consensus       147 -----------~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~---~-~~~~~~~~~~~  209 (260)
T 1nff_A          147 -----------TVACHGYTATKFAVRGLTKSTALELGPSG--IRVNSIHPGLVKTPMTDWVPED---I-FQTALGRAAEP  209 (260)
T ss_dssp             -----------CTTBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCBCSGGGTTSCTT---C-SCCSSSSCBCH
T ss_pred             -----------CCCchhHHHHHHHHHHHHHHHHHHhCccC--cEEEEEEeCCCCCCccccchhh---H-HhCccCCCCCH
Confidence                       56677899999999999999999999888  9999999999999986511110   0 01122345689


Q ss_pred             HHHHHHHHHHHhcCccccCCceeeccCccccc
Q 019722          269 PQGAATTCYVAIHPRLVNVSGKYFADCNEAWT  300 (336)
Q Consensus       269 ~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~  300 (336)
                      +|+|..++++++ +...+++|+.+..+|+...
T Consensus       210 ~dvA~~v~~l~s-~~~~~~~G~~~~v~gG~~~  240 (260)
T 1nff_A          210 VEVSNLVVYLAS-DESSYSTGAEFVVDGGTVA  240 (260)
T ss_dssp             HHHHHHHHHHHS-GGGTTCCSCEEEESTTGGG
T ss_pred             HHHHHHHHHHhC-ccccCCcCCEEEECCCeec
Confidence            999999999987 6678899999999988544

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=100.00  E-value=3e-39  Score=291.56  Aligned_cols=244  Identities=18%  Similarity=0.182  Sum_probs=204.2

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      +++++||++|||||++|||++++++|+++|++|++++|+.+++++..+++     +.++.++++|++++++++++++++ 
T Consensus        25 ~~~l~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~-----~~~~~~~~~Dl~~~~~v~~~~~~~-   98 (281)
T 3ppi_A           25 IKQFEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADEL-----GNRAEFVSTNVTSEDSVLAAIEAA-   98 (281)
T ss_dssp             CGGGTTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----CTTEEEEECCTTCHHHHHHHHHHH-
T ss_pred             hhccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh-----CCceEEEEcCCCCHHHHHHHHHHH-
Confidence            56789999999999999999999999999999999999999888877776     568999999999999999999999 


Q ss_pred             hcCCCccEEEEc-ccCCCCC-------CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhcc-CCCCCeEEEEcCCccc
Q 019722          110 SLNLPLNLLINN-AGKFAHQ-------HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKA-TGIQGRIVNVSSSIHS  180 (336)
Q Consensus       110 ~~~~~id~lv~n-Ag~~~~~-------~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~-~~~~grIV~vsS~~~~  180 (336)
                      +.++++|++||| ||+....       .+.+.++|++.+++|+.+++.++++++|.+.+.... ....|+||++||..+.
T Consensus        99 ~~~~~id~lv~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~  178 (281)
T 3ppi_A           99 NQLGRLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAGY  178 (281)
T ss_dssp             TTSSEEEEEEECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEEECCGGGT
T ss_pred             HHhCCCCeEEEccCcccccccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEEEeccccc
Confidence            778999999999 5543322       256778899999999999999999999999862110 1125899999999887


Q ss_pred             cccCCcccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHH-HHHHH
Q 019722          181 WFSGDMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFIT-DLVFF  259 (336)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~-~~~~~  259 (336)
                      .+                 .++...|++||++++.|+++++.|+++.|  |+||+|+||+|.|++.+....... .....
T Consensus       179 ~~-----------------~~~~~~Y~asKaa~~~~~~~la~e~~~~g--i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~  239 (281)
T 3ppi_A          179 EG-----------------QIGQTAYAAAKAGVIGLTIAAARDLSSAG--IRVNTIAPGTMKTPIMESVGEEALAKFAAN  239 (281)
T ss_dssp             SC-----------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCHHHHTTCHHHHHHHHHT
T ss_pred             CC-----------------CCCCcccHHHHHHHHHHHHHHHHHHhhcC--eEEEEEecCcCCchhhhcccHHHHHHHHhc
Confidence            76                 66788999999999999999999999988  999999999999999876543222 22222


Q ss_pred             HHH-hhcCChHHHHHHHHHHHhcCccccCCceeeccCcccccc
Q 019722          260 LTS-KLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWTS  301 (336)
Q Consensus       260 ~~~-~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~~  301 (336)
                      .+. .+..+|+|+|.+++|++++   .+++|+.+.++|+....
T Consensus       240 ~~~~~~~~~pedvA~~v~~l~s~---~~~tG~~i~vdGG~~~~  279 (281)
T 3ppi_A          240 IPFPKRLGTPDEFADAAAFLLTN---GYINGEVMRLDGAQRFT  279 (281)
T ss_dssp             CCSSSSCBCHHHHHHHHHHHHHC---SSCCSCEEEESTTCCCC
T ss_pred             CCCCCCCCCHHHHHHHHHHHHcC---CCcCCcEEEECCCcccC
Confidence            222 4566899999999999973   68899999999986654

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=100.00  E-value=1.4e-39  Score=289.34  Aligned_cols=232  Identities=24%  Similarity=0.289  Sum_probs=188.6

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      .+++++|++|||||++|||++++++|+++|++|++++|+.+++             ..+.++++|++|+++++++++++.
T Consensus        16 ~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~-------------~~~~~~~~Dl~d~~~v~~~~~~~~   82 (253)
T 2nm0_A           16 PRSHMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPP-------------EGFLAVKCDITDTEQVEQAYKEIE   82 (253)
T ss_dssp             ----CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCC-------------TTSEEEECCTTSHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhh-------------ccceEEEecCCCHHHHHHHHHHHH
Confidence            5678999999999999999999999999999999999986532             237889999999999999999999


Q ss_pred             hcCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcc
Q 019722          110 SLNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMI  187 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~  187 (336)
                      +.++++|+||||||+....  .+.+.++|++++++|+.+++.++++++|.|++++     .++||++||.++..+     
T Consensus        83 ~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~-----~g~iv~isS~~~~~~-----  152 (253)
T 2nm0_A           83 ETHGPVEVLIANAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAK-----KGRVVLISSVVGLLG-----  152 (253)
T ss_dssp             HHTCSCSEEEEECSCCTTTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHT-----CEEEEEECCCCCCCC-----
T ss_pred             HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-----CCEEEEECchhhCCC-----
Confidence            9999999999999976543  5678899999999999999999999999998765     589999999887654     


Q ss_pred             cccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccch-hHHHHHHHHHHhhcC
Q 019722          188 RYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREG-FITDLVFFLTSKLLK  266 (336)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~-~~~~~~~~~~~~~~~  266 (336)
                                  .+....|++||++++.|+++++.|+++.|  |+||+|+||+++|++.+.... .........+..+..
T Consensus       153 ------------~~~~~~Y~asK~a~~~~~~~la~e~~~~g--i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~p~~~~~  218 (253)
T 2nm0_A          153 ------------SAGQANYAASKAGLVGFARSLARELGSRN--ITFNVVAPGFVDTDMTKVLTDEQRANIVSQVPLGRYA  218 (253)
T ss_dssp             ------------HHHHHHHHHHHHHHHHHHHHHHHHHCSSS--EEEEEEEECSBCC---------CHHHHHTTCTTCSCB
T ss_pred             ------------CCCcHHHHHHHHHHHHHHHHHHHHhhhcC--eEEEEEEeCcCcCcchhhcCHHHHHHHHhcCCCCCCc
Confidence                        55678999999999999999999999887  999999999999998765321 111111112334567


Q ss_pred             ChHHHHHHHHHHHhcCccccCCceeeccCcccc
Q 019722          267 TIPQGAATTCYVAIHPRLVNVSGKYFADCNEAW  299 (336)
Q Consensus       267 ~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  299 (336)
                      +|+|+|..++++++ +...+++|+.+.++|+..
T Consensus       219 ~p~dvA~~i~~l~s-~~~~~~tG~~i~vdGG~~  250 (253)
T 2nm0_A          219 RPEEIAATVRFLAS-DDASYITGAVIPVDGGLG  250 (253)
T ss_dssp             CHHHHHHHHHHHHS-GGGTTCCSCEEEESTTTT
T ss_pred             CHHHHHHHHHHHhC-ccccCCcCcEEEECCccc
Confidence            89999999999987 667899999999998753

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=4.9e-39  Score=288.63  Aligned_cols=238  Identities=24%  Similarity=0.282  Sum_probs=200.2

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      ..+++||++|||||++|||++++++|+++|++|++++|+++.+++..+++      .++.++++|++|+++++++++++.
T Consensus         4 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~------~~~~~~~~Dv~d~~~v~~~~~~~~   77 (270)
T 1yde_A            4 GTRYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQEL------PGAVFILCDVTQEDDVKTLVSETI   77 (270)
T ss_dssp             CCTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC------TTEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh------cCCeEEEcCCCCHHHHHHHHHHHH
Confidence            45689999999999999999999999999999999999988776655443      248899999999999999999999


Q ss_pred             hcCCCccEEEEcccCCCC---CCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCc
Q 019722          110 SLNLPLNLLINNAGKFAH---QHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDM  186 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~~---~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~  186 (336)
                      +.++++|+||||||+...   ..+.+.++|++.+++|+.+++.++++++|.|+++      .++||++||..+..+    
T Consensus        78 ~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~------~g~iv~isS~~~~~~----  147 (270)
T 1yde_A           78 RRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKS------QGNVINISSLVGAIG----  147 (270)
T ss_dssp             HHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH------TCEEEEECCHHHHHC----
T ss_pred             HHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHC------CCEEEEEcCccccCC----
Confidence            999999999999997643   2567888999999999999999999999999765      389999999877765    


Q ss_pred             ccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccc----hhHHHHH---HH
Q 019722          187 IRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRERE----GFITDLV---FF  259 (336)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~----~~~~~~~---~~  259 (336)
                                   .+....|++||++++.++++++.|+++.|  |+||+|+||++.|++.+...    .......   ..
T Consensus       148 -------------~~~~~~Y~asKaa~~~~~~~la~e~~~~g--i~vn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~  212 (270)
T 1yde_A          148 -------------QAQAVPYVATKGAVTAMTKALALDESPYG--VRVNCISPGNIWTPLWEELAALMPDPRASIREGMLA  212 (270)
T ss_dssp             -------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHT
T ss_pred             -------------CCCCcccHHHHHHHHHHHHHHHHHhhhhC--cEEEEEEeCccccchhhhhhhcccchHHHHHHHhhc
Confidence                         55677899999999999999999999888  99999999999999864321    1111111   11


Q ss_pred             HHHhhcCChHHHHHHHHHHHhcCccccCCceeeccCccccc
Q 019722          260 LTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWT  300 (336)
Q Consensus       260 ~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~  300 (336)
                      .+..+...|+|+|..++|+++ + +.+++|+.+.++|+...
T Consensus       213 ~p~~r~~~p~dva~~v~~L~s-~-~~~itG~~i~vdGG~~~  251 (270)
T 1yde_A          213 QPLGRMGQPAEVGAAAVFLAS-E-ANFCTGIELLVTGGAEL  251 (270)
T ss_dssp             STTSSCBCHHHHHHHHHHHHH-H-CTTCCSCEEEESTTTTS
T ss_pred             CCCCCCcCHHHHHHHHHHHcc-c-CCCcCCCEEEECCCeec
Confidence            233456789999999999998 4 58999999999988543

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=100.00  E-value=4.3e-39  Score=289.24  Aligned_cols=241  Identities=26%  Similarity=0.297  Sum_probs=195.7

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEe-eCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcC
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGARLVLP-ARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLN  112 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~-~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  112 (336)
                      ++|++|||||++|||+++|++|+++|++|+++ .|+.+.+++..+++...  +.++.++++|++++++++++++++.+.+
T Consensus        25 ~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  102 (272)
T 4e3z_A           25 DTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITES--GGEAVAIPGDVGNAADIAAMFSAVDRQF  102 (272)
T ss_dssp             CSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHHhC
Confidence            58999999999999999999999999999877 78888888888877665  5689999999999999999999999999


Q ss_pred             CCccEEEEcccCCCC---CCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcccc
Q 019722          113 LPLNLLINNAGKFAH---QHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRY  189 (336)
Q Consensus       113 ~~id~lv~nAg~~~~---~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~  189 (336)
                      +++|+||||||+...   ..+.+.++|++++++|+.+++.++++++|.|.+...  +..++||++||.++..+.      
T Consensus       103 g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~--~~~g~iv~isS~~~~~~~------  174 (272)
T 4e3z_A          103 GRLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYS--GQGGAIVNVSSMAAILGS------  174 (272)
T ss_dssp             SCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGT--CCCEEEEEECCTHHHHCC------
T ss_pred             CCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhcc--CCCCEEEEEcchHhccCC------
Confidence            999999999998653   256788999999999999999999999999976421  125799999999887651      


Q ss_pred             cccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccc--hhHHHHHHHHHHhhcCC
Q 019722          190 LGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRERE--GFITDLVFFLTSKLLKT  267 (336)
Q Consensus       190 ~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~--~~~~~~~~~~~~~~~~~  267 (336)
                                .+....|++||++++.|+++++.|+++.|  |+||+|+||+|+|++.....  ..........+..+...
T Consensus       175 ----------~~~~~~Y~asKaa~~~~~~~la~e~~~~g--i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (272)
T 4e3z_A          175 ----------ATQYVDYAASKAAIDTFTIGLAREVAAEG--IRVNAVRPGIIETDLHASGGLPDRAREMAPSVPMQRAGM  242 (272)
T ss_dssp             ----------TTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBC------------------CCTTSSCBC
T ss_pred             ----------CCCcchhHHHHHHHHHHHHHHHHHHHHcC--cEEEEEecCCCcCCcccccCChHHHHHHhhcCCcCCCcC
Confidence                      23567899999999999999999999988  99999999999999876521  11222222233445567


Q ss_pred             hHHHHHHHHHHHhcCccccCCceeeccCcc
Q 019722          268 IPQGAATTCYVAIHPRLVNVSGKYFADCNE  297 (336)
Q Consensus       268 ~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~  297 (336)
                      |+|+|.+++++++ +...+++|+.|.++|+
T Consensus       243 ~edvA~~i~~l~s-~~~~~~tG~~i~vdgG  271 (272)
T 4e3z_A          243 PEEVADAILYLLS-PSASYVTGSILNVSGG  271 (272)
T ss_dssp             HHHHHHHHHHHHS-GGGTTCCSCEEEESTT
T ss_pred             HHHHHHHHHHHhC-CccccccCCEEeecCC
Confidence            9999999999987 6678999999998875

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=100.00  E-value=1e-38  Score=292.96  Aligned_cols=257  Identities=17%  Similarity=0.193  Sum_probs=213.5

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEe---------eCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLP---------ARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSS  100 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~---------~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~  100 (336)
                      .++|+||++|||||++|||++++++|+++|++|+++         +|+.+++++..++++..  +..   ..+|+++.++
T Consensus         4 ~~~l~gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~--~~~---~~~D~~~~~~   78 (319)
T 1gz6_A            4 PLRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRR--GGK---AVANYDSVEA   78 (319)
T ss_dssp             CCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHT--TCE---EEEECCCGGG
T ss_pred             CCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhh--CCe---EEEeCCCHHH
Confidence            367899999999999999999999999999999996         45777888888887654  222   3489999999


Q ss_pred             HHHHHHHHHhcCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCc
Q 019722          101 VRNFVSQFHSLNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSI  178 (336)
Q Consensus       101 v~~~~~~~~~~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~  178 (336)
                      ++++++++.+.++++|+||||||+....  .+.+.++|+.++++|+.|++.++++++|.|++++     .++||++||..
T Consensus        79 ~~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-----~grIV~vsS~~  153 (319)
T 1gz6_A           79 GEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQN-----YGRIIMTASAS  153 (319)
T ss_dssp             HHHHHHHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-----CEEEEEECCHH
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-----CCEEEEECChh
Confidence            9999999999999999999999986543  4678899999999999999999999999998875     48999999988


Q ss_pred             cccccCCcccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHHHH
Q 019722          179 HSWFSGDMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVF  258 (336)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~  258 (336)
                      +..+                 .++...|++||++++.|++.+++++++.|  |+||+|+||++ |++.+....  ..   
T Consensus       154 ~~~~-----------------~~~~~~Y~aSK~a~~~~~~~la~el~~~g--I~vn~v~PG~~-t~~~~~~~~--~~---  208 (319)
T 1gz6_A          154 GIYG-----------------NFGQANYSAAKLGLLGLANTLVIEGRKNN--IHCNTIAPNAG-SRMTETVMP--ED---  208 (319)
T ss_dssp             HHHC-----------------CTTCHHHHHHHHHHHHHHHHHHHHTGGGT--EEEEEEEEECC-STTTGGGSC--HH---
T ss_pred             hccC-----------------CCCCHHHHHHHHHHHHHHHHHHHHhcccC--EEEEEEeCCCc-cccccccCC--hh---
Confidence            7765                 55677899999999999999999999888  99999999998 887654211  11   


Q ss_pred             HHHHhhcCChHHHHHHHHHHHhcCccccCCceeeccCcccc--------------cccCCCCHHHHHHHHHHHHHhhccC
Q 019722          259 FLTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAW--------------TSKLGSNSNEASRLWAASELLVSRD  324 (336)
Q Consensus       259 ~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~--------------~~~~~~~~~~~~~~w~~~~~~~~~~  324 (336)
                         .....+|+++|..++|+++.  ..+++|++|.++|+..              ..+...|.+..+++|+.++++++..
T Consensus       209 ---~~~~~~p~dvA~~~~~l~s~--~~~~tG~~~~v~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lw~~~~~~~~~~  283 (319)
T 1gz6_A          209 ---LVEALKPEYVAPLVLWLCHE--SCEENGGLFEVGAGWIGKLRWERTLGAIVRKRNQPMTPEAVRDNWVKICDFSNAS  283 (319)
T ss_dssp             ---HHHHSCGGGTHHHHHHHTST--TCCCCSCEEEEETTEEEEEEEEECCCEECCBTTBCCCHHHHHHTHHHHTCCTTCB
T ss_pred             ---hhccCCHHHHHHHHHHHhCc--hhhcCCCEEEECCCeEEEEeeeeccceeccCCCCCCCHHHHHHHHHHhhcccccc
Confidence               11246899999999999874  3478999998776521              1244578999999999999998754


Q ss_pred             CC
Q 019722          325 PK  326 (336)
Q Consensus       325 ~~  326 (336)
                      .+
T Consensus       284 ~~  285 (319)
T 1gz6_A          284 KP  285 (319)
T ss_dssp             CC
T ss_pred             CC
Confidence            33

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=100.00  E-value=1.9e-39  Score=288.49  Aligned_cols=237  Identities=26%  Similarity=0.315  Sum_probs=202.6

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEe-eCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhc
Q 019722           33 LSSVTAIITGATSGIGAETARVLAKRGARLVLP-ARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSL  111 (336)
Q Consensus        33 l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~-~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  111 (336)
                      ++||++|||||++|||++++++|+++|++|+++ .|+.+..++..++++..  +.++.++.+|+++.++++.+++++.+.
T Consensus         5 l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   82 (255)
T 3icc_A            5 LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSN--GGSAFSIGANLESLHGVEALYSSLDNE   82 (255)
T ss_dssp             TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHT--TCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhc--CCceEEEecCcCCHHHHHHHHHHHHHH
Confidence            789999999999999999999999999999885 67888888888888765  568999999999999999999998776


Q ss_pred             C------CCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCcccccc
Q 019722          112 N------LPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFS  183 (336)
Q Consensus       112 ~------~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~  183 (336)
                      +      +++|+||||||+....  .+.+.++|++++++|+.+++.++++++|.|.+       .++||++||.++..+ 
T Consensus        83 ~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-------~~~iv~isS~~~~~~-  154 (255)
T 3icc_A           83 LQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRD-------NSRIINISSAATRIS-  154 (255)
T ss_dssp             HHHHHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE-------EEEEEEECCGGGTSC-
T ss_pred             hcccccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCC-------CCEEEEeCChhhccC-
Confidence            4      3599999999976543  56788999999999999999999999999833       379999999988766 


Q ss_pred             CCcccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhH--HH-HHHHH
Q 019722          184 GDMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFI--TD-LVFFL  260 (336)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~--~~-~~~~~  260 (336)
                                      .+....|++||++++.|+++++.|+.+.|  |+||+|+||+++|++.+......  .. .....
T Consensus       155 ----------------~~~~~~Y~asKaa~~~~~~~la~e~~~~g--i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~  216 (255)
T 3icc_A          155 ----------------LPDFIAYSMTKGAINTMTFTLAKQLGARG--ITVNAILPGFVKTDMNAELLSDPMMKQYATTIS  216 (255)
T ss_dssp             ----------------CTTBHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECCBCCSSSTTTTTSHHHHHHHHHTS
T ss_pred             ----------------CCCcchhHHhHHHHHHHHHHHHHHHHhcC--eEEEEEEEeeecccchhhhcccHHHHHhhhccC
Confidence                            67788999999999999999999999988  99999999999999988754321  11 11122


Q ss_pred             HHhhcCChHHHHHHHHHHHhcCccccCCceeeccCccc
Q 019722          261 TSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEA  298 (336)
Q Consensus       261 ~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  298 (336)
                      +..+..+|+|++.+++|+++ +...+++|+.+.++|+.
T Consensus       217 ~~~~~~~~~dva~~~~~l~s-~~~~~~tG~~i~vdgG~  253 (255)
T 3icc_A          217 AFNRLGEVEDIADTAAFLAS-PDSRWVTGQLIDVSGGS  253 (255)
T ss_dssp             TTSSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESSST
T ss_pred             CcCCCCCHHHHHHHHHHHhC-cccCCccCCEEEecCCe
Confidence            33456789999999999987 77789999999999874

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=4.2e-39  Score=285.05  Aligned_cols=233  Identities=25%  Similarity=0.278  Sum_probs=190.7

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      |.+|+||++|||||++|||++++++|+++|++|++++|+.+++++.. ++      .++.++++|++++++++++.    
T Consensus         1 m~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-~~------~~~~~~~~D~~~~~~~~~~~----   69 (246)
T 2ag5_A            1 MGRLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELE-KY------PGIQTRVLDVTKKKQIDQFA----   69 (246)
T ss_dssp             CCTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGG-GS------TTEEEEECCTTCHHHHHHHH----
T ss_pred             CCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-hc------cCceEEEeeCCCHHHHHHHH----
Confidence            35689999999999999999999999999999999999987655432 21      27899999999999988443    


Q ss_pred             hcCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcc
Q 019722          110 SLNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMI  187 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~  187 (336)
                      +.++++|+||||||+....  .+.+.++|++.+++|+.+++.++++++|.|++++     .++||++||..+..+     
T Consensus        70 ~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-----~g~iv~isS~~~~~~-----  139 (246)
T 2ag5_A           70 NEVERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQK-----SGNIINMSSVASSVK-----  139 (246)
T ss_dssp             HHCSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-----CEEEEEECCSBTTTB-----
T ss_pred             HHhCCCCEEEECCccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-----CceEEEEechHhCcC-----
Confidence            4468999999999976543  5677899999999999999999999999998765     489999999877654     


Q ss_pred             cccccccCCCCCCC-hhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccc-------hhHHHHHHH
Q 019722          188 RYLGQISRNKSHYD-ATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRERE-------GFITDLVFF  259 (336)
Q Consensus       188 ~~~~~~~~~~~~~~-~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~-------~~~~~~~~~  259 (336)
                                  .+ +...|++||++++.++++++.|+++.|  |+||+|+||++.|++.....       .........
T Consensus       140 ------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~  205 (246)
T 2ag5_A          140 ------------GVVNRCVYSTTKAAVIGLTKSVAADFIQQG--IRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKR  205 (246)
T ss_dssp             ------------CCTTBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHT
T ss_pred             ------------CCCCCccHHHHHHHHHHHHHHHHHHhhhcC--cEEEEEeeCcCcCcchhhhhhcccCcHHHHHHHHhc
Confidence                        34 677899999999999999999999888  99999999999999865311       011111111


Q ss_pred             HHHhhcCChHHHHHHHHHHHhcCccccCCceeeccCccc
Q 019722          260 LTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEA  298 (336)
Q Consensus       260 ~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  298 (336)
                      .+..+..+|+|+|..++|+++ +.+.+++|+.+.++|+.
T Consensus       206 ~~~~~~~~~~dvA~~v~~l~s-~~~~~~tG~~i~vdgG~  243 (246)
T 2ag5_A          206 QKTGRFATAEEIAMLCVYLAS-DESAYVTGNPVIIDGGW  243 (246)
T ss_dssp             CTTSSCEEHHHHHHHHHHHHS-GGGTTCCSCEEEECTTG
T ss_pred             CCCCCCCCHHHHHHHHHHHhC-ccccCCCCCEEEECCCc
Confidence            123345689999999999987 66789999999999874

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=100.00  E-value=4e-39  Score=288.30  Aligned_cols=240  Identities=13%  Similarity=0.147  Sum_probs=198.9

Q ss_pred             CCCCCEEEEeCCC--ChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           32 NLSSVTAIITGAT--SGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        32 ~l~gk~~lItGgs--~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      +++||++|||||+  +|||++++++|+++|++|++++|+. +.++..+++....+  ...++++|++++++++++++++.
T Consensus         6 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~~l~~~~~--~~~~~~~D~~~~~~v~~~~~~~~   82 (265)
T 1qsg_A            6 FLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND-KLKGRVEEFAAQLG--SDIVLQCDVAEDASIDTMFAELG   82 (265)
T ss_dssp             TTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESST-TTHHHHHHHHHHTT--CCCEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcH-HHHHHHHHHHHhcC--CcEEEEccCCCHHHHHHHHHHHH
Confidence            3899999999999  9999999999999999999999987 44455555655432  34789999999999999999999


Q ss_pred             hcCCCccEEEEcccCCCC-----C-CC-CCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccc
Q 019722          110 SLNLPLNLLINNAGKFAH-----Q-HA-ISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWF  182 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~~-----~-~~-~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~  182 (336)
                      +.++++|+||||||+...     . .+ .+.++|++++++|+.+++.++++++|.|.+       +|+||++||..+..+
T Consensus        83 ~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-------~g~iv~isS~~~~~~  155 (265)
T 1qsg_A           83 KVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNP-------GSALLTLSYLGAERA  155 (265)
T ss_dssp             TTCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE-------EEEEEEEECGGGTSB
T ss_pred             HHcCCCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc-------CCEEEEEcchhhccC
Confidence            999999999999997652     1 34 678899999999999999999999999853       379999999877655


Q ss_pred             cCCcccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchh---HHHHHHH
Q 019722          183 SGDMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGF---ITDLVFF  259 (336)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~---~~~~~~~  259 (336)
                                       .+....|++||++++.|+++++.|+++.|  |+||+|+||+|+|++.+.....   .......
T Consensus       156 -----------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~  216 (265)
T 1qsg_A          156 -----------------IPNYNVMGLAKASLEANVRYMANAMGPEG--VRVNAISAGPIRTLAASGIKDFRKMLAHCEAV  216 (265)
T ss_dssp             -----------------CTTTTHHHHHHHHHHHHHHHHHHHHTTTT--EEEEEEEECCCCCTTGGGSTTHHHHHHHHHHH
T ss_pred             -----------------CCCchHHHHHHHHHHHHHHHHHHHhhhcC--eEEEEEEeCCCccchhhcccccHHHHHHHHhc
Confidence                             56677899999999999999999999877  9999999999999987653221   1111112


Q ss_pred             HHHhhcCChHHHHHHHHHHHhcCccccCCceeeccCcccccc
Q 019722          260 LTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWTS  301 (336)
Q Consensus       260 ~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~~  301 (336)
                      .+..+..+|+|+|..++|+++ +...+++|+.+.++|+....
T Consensus       217 ~p~~~~~~~~dva~~v~~l~s-~~~~~~tG~~~~vdgG~~~~  257 (265)
T 1qsg_A          217 TPIRRTVTIEDVGNSAAFLCS-DLSAGISGEVVHVDGGFSIA  257 (265)
T ss_dssp             STTSSCCCHHHHHHHHHHHTS-GGGTTCCSCEEEESTTGGGB
T ss_pred             CCCCCCCCHHHHHHHHHHHhC-chhcCccCCEEEECCCcCCC
Confidence            233456799999999999987 66789999999999885543

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=100.00  E-value=1.4e-39  Score=291.91  Aligned_cols=237  Identities=18%  Similarity=0.111  Sum_probs=195.4

Q ss_pred             CCCCCCEEEEeCC--CChHHHHHHHHHHHCCCEEEEeeCChHHH-HHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHH
Q 019722           31 PNLSSVTAIITGA--TSGIGAETARVLAKRGARLVLPARSLKAA-EEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQ  107 (336)
Q Consensus        31 ~~l~gk~~lItGg--s~gIG~aia~~L~~~G~~V~~~~r~~~~~-~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~  107 (336)
                      .+++||++|||||  ++|||++++++|+++|++|++++|+.++. ++..    +.. +.++.++++|+++++++++++++
T Consensus         3 ~~l~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~----~~~-~~~~~~~~~Dv~~~~~v~~~~~~   77 (269)
T 2h7i_A            3 GLLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRIT----DRL-PAKAPLLELDVQNEEHLASLAGR   77 (269)
T ss_dssp             CTTTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHH----TTS-SSCCCEEECCTTCHHHHHHHHHH
T ss_pred             cccCCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHH----Hhc-CCCceEEEccCCCHHHHHHHHHH
Confidence            4589999999999  99999999999999999999999987653 3332    222 34788999999999999999999


Q ss_pred             HHhcCC---CccEEEEcccCCC-------CCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCC
Q 019722          108 FHSLNL---PLNLLINNAGKFA-------HQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSS  177 (336)
Q Consensus       108 ~~~~~~---~id~lv~nAg~~~-------~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~  177 (336)
                      +.+.++   ++|+||||||+..       +..+.+.++|++.+++|+.+++.++++++|.|++       .|+||++||.
T Consensus        78 ~~~~~g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-------~g~iv~iss~  150 (269)
T 2h7i_A           78 VTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNP-------GGSIVGMDFD  150 (269)
T ss_dssp             HHHHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE-------EEEEEEEECC
T ss_pred             HHHHhCCCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhcc-------CCeEEEEcCc
Confidence            999888   9999999999765       2256788999999999999999999999999854       2799999997


Q ss_pred             ccccccCCcccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCcc-----chh
Q 019722          178 IHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRER-----EGF  252 (336)
Q Consensus       178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~-----~~~  252 (336)
                      .+ .+                 .+.+..|++||++++.|+++++.|+++.|  |+||+|+||+++|++.+..     ...
T Consensus       151 ~~-~~-----------------~~~~~~Y~asKaa~~~l~~~la~e~~~~g--i~vn~v~PG~v~T~~~~~~~~~~~~~~  210 (269)
T 2h7i_A          151 PS-RA-----------------MPAYNWMTVAKSALESVNRFVAREAGKYG--VRSNLVAAGPIRTLAMSAIVGGALGEE  210 (269)
T ss_dssp             CS-SC-----------------CTTTHHHHHHHHHHHHHHHHHHHHHHTTT--CEEEEEEECCCCCHHHHHHHTTTTCHH
T ss_pred             cc-cc-----------------cCchHHHHHHHHHHHHHHHHHHHHhcccC--cEEEEEecCcccchhhhccccccchhh
Confidence            64 33                 56678899999999999999999999887  9999999999999986532     111


Q ss_pred             H--------HHHHHHHHHh-hcCChHHHHHHHHHHHhcCccccCCceeeccCccccc
Q 019722          253 I--------TDLVFFLTSK-LLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWT  300 (336)
Q Consensus       253 ~--------~~~~~~~~~~-~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~  300 (336)
                      .        .......+.. +..+|+|+|..++|+++ +.+.++||+.+.++|+...
T Consensus       211 ~~~~~~~~~~~~~~~~p~~rr~~~p~dvA~~v~~L~s-~~~~~itG~~i~vdGG~~~  266 (269)
T 2h7i_A          211 AGAQIQLLEEGWDQRAPIGWNMKDATPVAKTVCALLS-DWLPATTGDIIYADGGAHT  266 (269)
T ss_dssp             HHHHHHHHHHHHHHHCTTCCCTTCCHHHHHHHHHHHS-SSCTTCCSEEEEESTTGGG
T ss_pred             HHHHHHHHHHhhhccCCcccCCCCHHHHHHHHHHHhC-chhccCcceEEEecCCeee
Confidence            0        0111122233 46789999999999997 7788999999999988543

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=100.00  E-value=2.2e-38  Score=288.67  Aligned_cols=232  Identities=22%  Similarity=0.246  Sum_probs=194.7

Q ss_pred             ccCCCCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHH
Q 019722           26 VTDGCPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFV  105 (336)
Q Consensus        26 ~~~~~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~  105 (336)
                      |...+.+++||++|||||++|||++++++|+++|++|++++|+.+++++..+++...  +.++.++++|+++++++++++
T Consensus        22 m~~~m~~l~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dv~d~~~v~~~~   99 (301)
T 3tjr_A           22 MDGFLSGFDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQ--GFDAHGVVCDVRHLDEMVRLA   99 (301)
T ss_dssp             --CCCCCSTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHH
T ss_pred             chhHHhccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCceEEEEccCCCHHHHHHHH
Confidence            444355699999999999999999999999999999999999999999998888765  568999999999999999999


Q ss_pred             HHHHhcCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCcccccc
Q 019722          106 SQFHSLNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFS  183 (336)
Q Consensus       106 ~~~~~~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~  183 (336)
                      +++.+.++++|+||||||+....  .+.+.++|++++++|+.|++.++++++|.|++++.    .|+||++||.++..+ 
T Consensus       100 ~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~----~g~iv~isS~~~~~~-  174 (301)
T 3tjr_A          100 DEAFRLLGGVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGT----GGHIAFTASFAGLVP-  174 (301)
T ss_dssp             HHHHHHHSSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCS----CEEEEEECCGGGTSC-
T ss_pred             HHHHHhCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCC----CcEEEEeCchhhcCC-
Confidence            99999999999999999987543  56788999999999999999999999999987642    379999999988776 


Q ss_pred             CCcccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHH--------
Q 019722          184 GDMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITD--------  255 (336)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~--------  255 (336)
                                      .++...|++||++++.|+++++.|+++.|  |+||+|+||+|+|++..........        
T Consensus       175 ----------------~~~~~~Y~asKaa~~~~~~~la~e~~~~g--i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~  236 (301)
T 3tjr_A          175 ----------------NAGLGTYGVAKYGVVGLAETLAREVKPNG--IGVSVLCPMVVETKLVSNSERIRGADYGMSATP  236 (301)
T ss_dssp             ----------------CTTBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEECCSCCCSSHHHHHHHHC----------
T ss_pred             ----------------CCCchHHHHHHHHHHHHHHHHHHHhcccC--cEEEEEECCccccccccccccccchhhccccCh
Confidence                            67788999999999999999999999988  9999999999999987653211000        


Q ss_pred             ---HHHHHHHhhcCChHHHHHHHHHHHhcC
Q 019722          256 ---LVFFLTSKLLKTIPQGAATTCYVAIHP  282 (336)
Q Consensus       256 ---~~~~~~~~~~~~~~~~a~~~~~l~~~~  282 (336)
                         ...........+|+++|..++..+..+
T Consensus       237 ~~~~~~~~~~~~~~~pedvA~~i~~~l~~~  266 (301)
T 3tjr_A          237 EGAFGPLPTQDESVSADDVARLTADAILAN  266 (301)
T ss_dssp             ------------CCCHHHHHHHHHHHHHHT
T ss_pred             hhhccccccccCCCCHHHHHHHHHHHHhcC
Confidence               000011123468999999999999744

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=100.00  E-value=2.6e-38  Score=282.91  Aligned_cols=245  Identities=18%  Similarity=0.184  Sum_probs=189.9

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      .+++++|++|||||++|||++++++|+++|++|++++|+.+++++..++++..  +.++.++.+|++++++++++++++.
T Consensus         9 ~~~l~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~   86 (266)
T 1xq1_A            9 RWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKK--GFQVTGSVCDASLRPEREKLMQTVS   86 (266)
T ss_dssp             TTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeeEEEECCCCCHHHHHHHHHHHH
Confidence            56799999999999999999999999999999999999999888888877664  5679999999999999999999998


Q ss_pred             hcC-CCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCc
Q 019722          110 SLN-LPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDM  186 (336)
Q Consensus       110 ~~~-~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~  186 (336)
                      +.+ +++|+||||||+....  .+.+.++|++.+++|+.+++.++++++|.|++++     .++||++||..+..+    
T Consensus        87 ~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-----~~~iv~isS~~~~~~----  157 (266)
T 1xq1_A           87 SMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASG-----CGNIIFMSSIAGVVS----  157 (266)
T ss_dssp             HHHTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-----SCEEEEEC-----------
T ss_pred             HHhCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-----CcEEEEEccchhccC----
Confidence            888 8999999999976532  5668899999999999999999999999998765     489999999877654    


Q ss_pred             ccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccc--hhHHHHHHHHHHhh
Q 019722          187 IRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRERE--GFITDLVFFLTSKL  264 (336)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~--~~~~~~~~~~~~~~  264 (336)
                                   .+....|+++|++++.++++++.++++.|  |+||+|+||++.|++.+...  ..........+..+
T Consensus       158 -------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~  222 (266)
T 1xq1_A          158 -------------ASVGSIYSATKGALNQLARNLACEWASDG--IRANAVAPAVIATPLAEAVYDDEFKKVVISRKPLGR  222 (266)
T ss_dssp             ----------------CCHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEECCSCC------------------------
T ss_pred             -------------CCCCchHHHHHHHHHHHHHHHHHHHhHhC--cEEEEEeeCCCccchhhhhcCHHHHHHHHhcCCCCC
Confidence                         45567899999999999999999999887  99999999999999876532  11111222233345


Q ss_pred             cCChHHHHHHHHHHHhcCccccCCceeeccCcccccc
Q 019722          265 LKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWTS  301 (336)
Q Consensus       265 ~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~~  301 (336)
                      ..+|+|++..++++++ +...+++|+.+..+|+....
T Consensus       223 ~~~~~dva~~~~~l~~-~~~~~~~G~~~~v~gG~~~~  258 (266)
T 1xq1_A          223 FGEPEEVSSLVAFLCM-PAASYITGQTICVDGGLTVN  258 (266)
T ss_dssp             -CCGGGGHHHHHHHTS-GGGTTCCSCEEECCCCEEET
T ss_pred             CcCHHHHHHHHHHHcC-ccccCccCcEEEEcCCcccc
Confidence            6789999999999987 66788999999999885443

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=100.00  E-value=6.3e-39  Score=286.45  Aligned_cols=241  Identities=16%  Similarity=0.137  Sum_probs=200.6

Q ss_pred             CCCCCCEEEEeCCC--ChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHH
Q 019722           31 PNLSSVTAIITGAT--SGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQF  108 (336)
Q Consensus        31 ~~l~gk~~lItGgs--~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~  108 (336)
                      .+++||++|||||+  +|||++++++|+++|++|++++|+.+ .++..+++.+..  ..+.++++|++++++++++++++
T Consensus         4 ~~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~--~~~~~~~~D~~~~~~v~~~~~~~   80 (261)
T 2wyu_A            4 VDLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAER-LRPEAEKLAEAL--GGALLFRADVTQDEELDALFAGV   80 (261)
T ss_dssp             ECCTTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGG-GHHHHHHHHHHT--TCCEEEECCTTCHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHH-HHHHHHHHHHhc--CCcEEEECCCCCHHHHHHHHHHH
Confidence            35889999999999  99999999999999999999999975 444555555543  24789999999999999999999


Q ss_pred             HhcCCCccEEEEcccCCCC------CCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccc
Q 019722          109 HSLNLPLNLLINNAGKFAH------QHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWF  182 (336)
Q Consensus       109 ~~~~~~id~lv~nAg~~~~------~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~  182 (336)
                      .+.++++|+||||||+...      ..+.+.++|++++++|+.+++.++++++|.|++       +|+||++||..+..+
T Consensus        81 ~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-------~g~iv~isS~~~~~~  153 (261)
T 2wyu_A           81 KEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLRE-------GGGIVTLTYYASEKV  153 (261)
T ss_dssp             HHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE-------EEEEEEEECGGGTSB
T ss_pred             HHHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhcc-------CCEEEEEecccccCC
Confidence            9999999999999997642      246788999999999999999999999999853       379999999877655


Q ss_pred             cCCcccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccch---hHHHHHHH
Q 019722          183 SGDMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREG---FITDLVFF  259 (336)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~---~~~~~~~~  259 (336)
                                       .+....|++||++++.++++++.|+++.|  |+||+|+||+|+|++.+....   ........
T Consensus       154 -----------------~~~~~~Y~asK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~  214 (261)
T 2wyu_A          154 -----------------VPKYNVMAIAKAALEASVRYLAYELGPKG--VRVNAISAGPVRTVAARSIPGFTKMYDRVAQT  214 (261)
T ss_dssp             -----------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECCCCCTGGGGCTTHHHHHHHHHHH
T ss_pred             -----------------CCCchHHHHHHHHHHHHHHHHHHHHhhhC--cEEEEEeeCCCcCchhhhccccHHHHHHHHhc
Confidence                             56677899999999999999999999888  999999999999998765321   11111222


Q ss_pred             HHHhhcCChHHHHHHHHHHHhcCccccCCceeeccCcccccc
Q 019722          260 LTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWTS  301 (336)
Q Consensus       260 ~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~~  301 (336)
                      .+..+..+|+|+|..++++++ +...+++|+.+..+|+....
T Consensus       215 ~p~~~~~~~~dva~~v~~l~s-~~~~~~tG~~~~vdgG~~~~  255 (261)
T 2wyu_A          215 APLRRNITQEEVGNLGLFLLS-PLASGITGEVVYVDAGYHIM  255 (261)
T ss_dssp             STTSSCCCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTGGGB
T ss_pred             CCCCCCCCHHHHHHHHHHHcC-hhhcCCCCCEEEECCCcccc
Confidence            233456789999999999997 66789999999999885443

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=100.00  E-value=6.1e-39  Score=284.26  Aligned_cols=232  Identities=23%  Similarity=0.334  Sum_probs=191.1

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      .++|+||++|||||++|||++++++|+++|++|++++|+.++++             .+..+++|++++++++++++++.
T Consensus        10 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~-------------~~~~~~~D~~~~~~~~~~~~~~~   76 (247)
T 1uzm_A           10 KPPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPK-------------GLFGVEVDVTDSDAVDRAFTAVE   76 (247)
T ss_dssp             CCCCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT-------------TSEEEECCTTCHHHHHHHHHHHH
T ss_pred             cccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHH-------------HhcCeeccCCCHHHHHHHHHHHH
Confidence            56799999999999999999999999999999999999865322             22248899999999999999999


Q ss_pred             hcCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcc
Q 019722          110 SLNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMI  187 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~  187 (336)
                      +.++++|+||||||+....  .+.+.++|++++++|+.+++.++++++|.|++++     .++||++||..+..+     
T Consensus        77 ~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-----~g~iv~isS~~~~~~-----  146 (247)
T 1uzm_A           77 EHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNK-----FGRMIFIGSVSGLWG-----  146 (247)
T ss_dssp             HHHSSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-----CEEEEEECCCCC--------
T ss_pred             HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-----CCEEEEECCHhhccC-----
Confidence            9899999999999976543  5678899999999999999999999999998764     489999999987765     


Q ss_pred             cccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhH-HHHHHHHHHhhcC
Q 019722          188 RYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFI-TDLVFFLTSKLLK  266 (336)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~-~~~~~~~~~~~~~  266 (336)
                                  .+....|++||++++.|+++++.|+++.|  |+||+|+||+++|++.+...... .......+..+..
T Consensus       147 ------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~~~~  212 (247)
T 1uzm_A          147 ------------IGNQANYAASKAGVIGMARSIARELSKAN--VTANVVAPGYIDTDMTRALDERIQQGALQFIPAKRVG  212 (247)
T ss_dssp             --------------CCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCHHHHHSCHHHHHHHGGGCTTCSCB
T ss_pred             ------------CCCChhHHHHHHHHHHHHHHHHHHhhhcC--cEEEEEEeCCCcccchhhcCHHHHHHHHhcCCCCCCc
Confidence                        55677899999999999999999999888  99999999999999865432211 1111112234467


Q ss_pred             ChHHHHHHHHHHHhcCccccCCceeeccCcccc
Q 019722          267 TIPQGAATTCYVAIHPRLVNVSGKYFADCNEAW  299 (336)
Q Consensus       267 ~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  299 (336)
                      +|+|+|..++++++ +...+++|+.+..+|+..
T Consensus       213 ~~~dvA~~~~~l~s-~~~~~~~G~~i~vdgG~~  244 (247)
T 1uzm_A          213 TPAEVAGVVSFLAS-EDASYISGAVIPVDGGMG  244 (247)
T ss_dssp             CHHHHHHHHHHHHS-GGGTTCCSCEEEESTTTT
T ss_pred             CHHHHHHHHHHHcC-ccccCCcCCEEEECCCcc
Confidence            89999999999987 667899999999998743

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=100.00  E-value=3.1e-38  Score=277.44  Aligned_cols=229  Identities=22%  Similarity=0.232  Sum_probs=196.2

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCC
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNL  113 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  113 (336)
                      ++|++|||||++|||++++++|+++|++|++++|+.+++++..+++.... +.++.++++|++++++++++++++.+.++
T Consensus         1 ~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   79 (235)
T 3l77_A            1 EMKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQ-GVEVFYHHLDVSKAESVEEFSKKVLERFG   79 (235)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH-CCCEEEEECCTTCHHHHHHHCC-HHHHHS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhc-CCeEEEEEeccCCHHHHHHHHHHHHHhcC
Confidence            47999999999999999999999999999999999999998888886443 56899999999999999999999999999


Q ss_pred             CccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcccccc
Q 019722          114 PLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLG  191 (336)
Q Consensus       114 ~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~  191 (336)
                      ++|+||||||+....  .+.+.++|++++++|+.+++.++++++|.|.+.      .+++|+++|..+..+         
T Consensus        80 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~------~~~ii~~sS~~~~~~---------  144 (235)
T 3l77_A           80 DVDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKRT------GGLALVTTSDVSARL---------  144 (235)
T ss_dssp             SCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH------TCEEEEECCGGGSSC---------
T ss_pred             CCCEEEECCccccccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc------CCcEEEEecchhccc---------
Confidence            999999999976543  567889999999999999999999999999554      489999999887765         


Q ss_pred             cccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHHHHHHHHhhcCChHHH
Q 019722          192 QISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSKLLKTIPQG  271 (336)
Q Consensus       192 ~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~  271 (336)
                              .+....|++||++++.|+++++.+  ..+  |+||+|+||+|+|++.+......       ...+..+|+|+
T Consensus       145 --------~~~~~~Y~~sKaa~~~~~~~l~~~--~~~--i~v~~v~PG~v~T~~~~~~~~~~-------~~~~~~~p~dv  205 (235)
T 3l77_A          145 --------IPYGGGYVSTKWAARALVRTFQIE--NPD--VRFFELRPGAVDTYFGGSKPGKP-------KEKGYLKPDEI  205 (235)
T ss_dssp             --------CTTCHHHHHHHHHHHHHHHHHHHH--CTT--SEEEEEEECSBSSSTTTCCSCCC-------GGGTCBCHHHH
T ss_pred             --------CCCcchHHHHHHHHHHHHHHHhhc--CCC--eEEEEEeCCccccccccccCCcc-------cccCCCCHHHH
Confidence                    566778999999999999999444  545  99999999999999987754311       11256789999


Q ss_pred             HHHHHHHHhcCccccCCceeeccCccc
Q 019722          272 AATTCYVAIHPRLVNVSGKYFADCNEA  298 (336)
Q Consensus       272 a~~~~~l~~~~~~~~~~G~~~~~~~~~  298 (336)
                      |.+++|+++ +...+++|+.+..++..
T Consensus       206 a~~v~~l~~-~~~~~~~~~~~~~~~~~  231 (235)
T 3l77_A          206 AEAVRCLLK-LPKDVRVEELMLRSVYQ  231 (235)
T ss_dssp             HHHHHHHHT-SCTTCCCCEEEECCTTS
T ss_pred             HHHHHHHHc-CCCCCccceEEEeeccc
Confidence            999999998 55577899988777654

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=100.00  E-value=4.7e-38  Score=284.32  Aligned_cols=242  Identities=24%  Similarity=0.318  Sum_probs=203.0

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      .+++++|++|||||++|||++++++|+++|++|++++|+.+++++..++++..  +.++.++.+|++|+++++++++++.
T Consensus        39 ~~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~d~~~v~~~~~~~~  116 (285)
T 2c07_A           39 YYCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSF--GYESSGYAGDVSKKEEISEVINKIL  116 (285)
T ss_dssp             CCCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTT--TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             cccCCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhc--CCceeEEECCCCCHHHHHHHHHHHH
Confidence            56789999999999999999999999999999999999998888888877654  5689999999999999999999999


Q ss_pred             hcCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcc
Q 019722          110 SLNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMI  187 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~  187 (336)
                      +.++++|+||||||+....  .+.+.++|++.+++|+.+++.++++++|.|.+++     .++||++||..+..+     
T Consensus       117 ~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-----~~~iv~isS~~~~~~-----  186 (285)
T 2c07_A          117 TEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNR-----YGRIINISSIVGLTG-----  186 (285)
T ss_dssp             HHCSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHT-----CEEEEEECCTHHHHC-----
T ss_pred             HhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-----CCEEEEECChhhccC-----
Confidence            9999999999999976543  5678899999999999999999999999998765     489999999987765     


Q ss_pred             cccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHH-HHHHHHHHhhcC
Q 019722          188 RYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFIT-DLVFFLTSKLLK  266 (336)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~-~~~~~~~~~~~~  266 (336)
                                  .+....|++||++++.++++++.++.+.|  |+||+|+||++.|++......... ......+..+..
T Consensus       187 ------------~~~~~~Y~asK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~  252 (285)
T 2c07_A          187 ------------NVGQANYSSSKAGVIGFTKSLAKELASRN--ITVNAIAPGFISSDMTDKISEQIKKNIISNIPAGRMG  252 (285)
T ss_dssp             ------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCC-----CCHHHHHHHHTTCTTSSCB
T ss_pred             ------------CCCCchHHHHHHHHHHHHHHHHHHHHHhC--cEEEEEEeCcEecCchhhcCHHHHHHHHhhCCCCCCC
Confidence                        55677899999999999999999999887  999999999999998765432211 111112233456


Q ss_pred             ChHHHHHHHHHHHhcCccccCCceeeccCccc
Q 019722          267 TIPQGAATTCYVAIHPRLVNVSGKYFADCNEA  298 (336)
Q Consensus       267 ~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  298 (336)
                      +|+|+|.+++++++ +...+++|+.+..+|+.
T Consensus       253 ~~~dvA~~~~~l~~-~~~~~~~G~~i~v~gG~  283 (285)
T 2c07_A          253 TPEEVANLACFLSS-DKSGYINGRVFVIDGGL  283 (285)
T ss_dssp             CHHHHHHHHHHHHS-GGGTTCCSCEEEESTTS
T ss_pred             CHHHHHHHHHHHhC-CCcCCCCCCEEEeCCCc
Confidence            89999999999987 56678999999888864

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=100.00  E-value=6.2e-39  Score=287.01  Aligned_cols=231  Identities=20%  Similarity=0.234  Sum_probs=195.2

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      .++|+||++|||||++|||++++++|+++|++|++++|+.+.             +.++.++++|++++++++++++++.
T Consensus         3 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-------------~~~~~~~~~Dl~~~~~v~~~~~~~~   69 (264)
T 2dtx_A            3 FSDLRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG-------------EAKYDHIECDVTNPDQVKASIDHIF   69 (264)
T ss_dssp             CGGGTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC-------------SCSSEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc-------------CCceEEEEecCCCHHHHHHHHHHHH
Confidence            456889999999999999999999999999999999998653             3478899999999999999999999


Q ss_pred             hcCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcc
Q 019722          110 SLNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMI  187 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~  187 (336)
                      +.++++|+||||||+....  .+.+.++|++.+++|+.+++.++++++|.|++++     .++||++||.++..+     
T Consensus        70 ~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-----~g~iv~isS~~~~~~-----  139 (264)
T 2dtx_A           70 KEYGSISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSR-----DPSIVNISSVQASII-----  139 (264)
T ss_dssp             HHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSS-----SCEEEEECCGGGTSC-----
T ss_pred             HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-----CcEEEEECCchhccC-----
Confidence            9999999999999976543  5678899999999999999999999999998754     489999999887665     


Q ss_pred             cccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccc------------hhHHH
Q 019722          188 RYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRERE------------GFITD  255 (336)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~------------~~~~~  255 (336)
                                  .+....|++||++++.|+++++.|+++.   |+||+|+||+++|++.....            .....
T Consensus       140 ------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~---i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~  204 (264)
T 2dtx_A          140 ------------TKNASAYVTSKHAVIGLTKSIALDYAPL---LRCNAVCPATIDTPLVRKAAELEVGSDPMRIEKKISE  204 (264)
T ss_dssp             ------------CTTBHHHHHHHHHHHHHHHHHHHHHTTT---SEEEEEEECSBCSHHHHHHHHHHHCSCHHHHHHHHHH
T ss_pred             ------------CCCchhHHHHHHHHHHHHHHHHHHhcCC---cEEEEEEeCCCcCcchhhhhhcccccCchhhHHHHHH
Confidence                        5667889999999999999999999864   99999999999999865421            01111


Q ss_pred             HHHHHHHhhcCChHHHHHHHHHHHhcCccccCCceeeccCcccc
Q 019722          256 LVFFLTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAW  299 (336)
Q Consensus       256 ~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  299 (336)
                      .....+..+...|+|+|..++++++ +...+++|+.+.++|+..
T Consensus       205 ~~~~~p~~~~~~p~dvA~~v~~l~s-~~~~~~tG~~i~vdGG~~  247 (264)
T 2dtx_A          205 WGHEHPMQRIGKPQEVASAVAFLAS-REASFITGTCLYVDGGLS  247 (264)
T ss_dssp             HHHHSTTSSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTGG
T ss_pred             HHhcCCCCCCcCHHHHHHHHHHHhC-chhcCCCCcEEEECCCcc
Confidence            1112233456789999999999987 667899999999998853

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=100.00  E-value=9.4e-38  Score=278.16  Aligned_cols=242  Identities=22%  Similarity=0.233  Sum_probs=203.4

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      .+++++|++|||||++|||++++++|+++|++|++++|+.+..++..++++..  +.++.++++|++|+++++++++++.
T Consensus         8 ~~~l~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~   85 (260)
T 3awd_A            8 KLRLDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRME--GHDVSSVVMDVTNTESVQNAVRSVH   85 (260)
T ss_dssp             GGCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHHH
Confidence            46789999999999999999999999999999999999998888877777654  4679999999999999999999999


Q ss_pred             hcCCCccEEEEcccCCC-C--CCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCc
Q 019722          110 SLNLPLNLLINNAGKFA-H--QHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDM  186 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~-~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~  186 (336)
                      +.++++|+||||||+.. .  ..+.+.++|++.+++|+.+++.+++++.|.|++++     .++||++||..+..+    
T Consensus        86 ~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-----~~~iv~~sS~~~~~~----  156 (260)
T 3awd_A           86 EQEGRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQK-----QGVIVAIGSMSGLIV----  156 (260)
T ss_dssp             HHHSCCCEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-----CEEEEEECCGGGTSC----
T ss_pred             HHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcC-----CCEEEEEecchhccc----
Confidence            88899999999999765 2  25677889999999999999999999999998765     489999999877654    


Q ss_pred             ccccccccCCCCCCChh--hHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCC-ccc--hhHHHHHHHHH
Q 019722          187 IRYLGQISRNKSHYDAT--RAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTR-ERE--GFITDLVFFLT  261 (336)
Q Consensus       187 ~~~~~~~~~~~~~~~~~--~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~-~~~--~~~~~~~~~~~  261 (336)
                                   .+..  ..|+++|++++.+++.++.++++.|  |+||+|+||++.|++.+ ...  ..........+
T Consensus       157 -------------~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~g--i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~  221 (260)
T 3awd_A          157 -------------NRPQQQAAYNASKAGVHQYIRSLAAEWAPHG--IRANAVAPTYIETTLTRFGMEKPELYDAWIAGTP  221 (260)
T ss_dssp             -------------CSSSCCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCBCCTTTHHHHTCHHHHHHHHHTCT
T ss_pred             -------------CCCCCccccHHHHHHHHHHHHHHHHHhhhcC--eEEEEEEeeeeccchhhcccCChHHHHHHHhcCC
Confidence                         2333  6899999999999999999999888  99999999999999876 221  11111111122


Q ss_pred             HhhcCChHHHHHHHHHHHhcCccccCCceeeccCccc
Q 019722          262 SKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEA  298 (336)
Q Consensus       262 ~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  298 (336)
                      ..+..+|+|+|..+++++. +...+++|+.+..+|+.
T Consensus       222 ~~~~~~~~dva~~~~~l~~-~~~~~~~G~~~~v~gg~  257 (260)
T 3awd_A          222 MGRVGQPDEVASVVQFLAS-DAASLMTGAIVNVDAGF  257 (260)
T ss_dssp             TSSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTT
T ss_pred             cCCCCCHHHHHHHHHHHhC-chhccCCCcEEEECCce
Confidence            3346789999999999987 55678999999888864

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=100.00  E-value=5.7e-38  Score=278.24  Aligned_cols=231  Identities=22%  Similarity=0.319  Sum_probs=186.8

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCCCc
Q 019722           36 VTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLPL  115 (336)
Q Consensus        36 k~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i  115 (336)
                      |++|||||++|||++++++|+++|++|++++|+.+++++..+++     +.++.++++|++++++++++++++.+.++++
T Consensus         1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   75 (248)
T 3asu_A            1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDEL-----GDNLYIAQLDVRNRAAIEEMLASLPAEWCNI   75 (248)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----CTTEEEEECCTTCHHHHHHHHHTSCTTTCCC
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----cCceEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence            68999999999999999999999999999999998887776665     3478999999999999999999998889999


Q ss_pred             cEEEEcccCCC---CCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccccccc
Q 019722          116 NLLINNAGKFA---HQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQ  192 (336)
Q Consensus       116 d~lv~nAg~~~---~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~~  192 (336)
                      |+||||||+..   +..+.+.++|++++++|+.|++.++++++|.|++++     .|+||++||..+..+          
T Consensus        76 D~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~-----~g~iv~isS~~~~~~----------  140 (248)
T 3asu_A           76 DILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERN-----HGHIINIGSTAGSWP----------  140 (248)
T ss_dssp             CEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-----CCEEEEECCGGGTSC----------
T ss_pred             CEEEECCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-----CceEEEEccchhccC----------
Confidence            99999999763   225678899999999999999999999999998765     589999999887765          


Q ss_pred             ccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCcee-CCCCCccchhHHHHH-HHHHHhhcCChHH
Q 019722          193 ISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVR-TRLTREREGFITDLV-FFLTSKLLKTIPQ  270 (336)
Q Consensus       193 ~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~-T~~~~~~~~~~~~~~-~~~~~~~~~~~~~  270 (336)
                             .++...|++||++++.|+++++.|+++.|  |+||+|+||+|+ |++............ .........+|+|
T Consensus       141 -------~~~~~~Y~asKaa~~~~~~~la~e~~~~g--i~v~~v~PG~v~gT~~~~~~~~~~~~~~~~~~~~~~~~~p~d  211 (248)
T 3asu_A          141 -------YAGGNVYGATKAFVRQFSLNLRTDLHGTA--VRVTDIEPGLVGGTEFSNVRFKGDDGKAEKTYQNTVALTPED  211 (248)
T ss_dssp             -------CTTCHHHHHHHHHHHHHHHHHHHHTTTSC--CEEEEEEECSBCC----------------------CCBCHHH
T ss_pred             -------CCCCchHHHHHHHHHHHHHHHHHHhhhcC--cEEEEEeccccccCcchhhcccCchHHHHHHHhccCCCCHHH
Confidence                   56678999999999999999999999887  999999999999 998653210000011 1111223458999


Q ss_pred             HHHHHHHHHhcCccccCCceeeccCcc
Q 019722          271 GAATTCYVAIHPRLVNVSGKYFADCNE  297 (336)
Q Consensus       271 ~a~~~~~l~~~~~~~~~~G~~~~~~~~  297 (336)
                      +|..++|+++.  ..+++|+.+...+.
T Consensus       212 vA~~v~~l~s~--~~~~~g~~i~v~~~  236 (248)
T 3asu_A          212 VSEAVWWVSTL--PAHVNINTLEMMPV  236 (248)
T ss_dssp             HHHHHHHHHHS--CTTCCCCEEEECCT
T ss_pred             HHHHHHHHhcC--CccceeeEEEEccc
Confidence            99999999984  36789988876654

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=100.00  E-value=5.1e-38  Score=280.18  Aligned_cols=244  Identities=23%  Similarity=0.257  Sum_probs=203.9

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeC-ChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGARLVLPAR-SLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      .+++||++|||||++|||++++++|+++|++|++++| +.+.+++..+++...  +.++.++++|+++++++.++++++.
T Consensus         3 ~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~   80 (261)
T 1gee_A            3 KDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKV--GGEAIAVKGDVTVESDVINLVQSAI   80 (261)
T ss_dssp             GGGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhc--CCceEEEECCCCCHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999999 888777777777654  4678999999999999999999999


Q ss_pred             hcCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcc
Q 019722          110 SLNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMI  187 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~  187 (336)
                      +.++++|+||||||.....  .+.+.++|++.+++|+.+++.++++++|.|.+++.    .++||++||..+..+     
T Consensus        81 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~----~~~iv~isS~~~~~~-----  151 (261)
T 1gee_A           81 KEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDI----KGTVINMSSVHEKIP-----  151 (261)
T ss_dssp             HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTC----CCEEEEECCGGGTSC-----
T ss_pred             HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCC----CCEEEEeCCHHhcCC-----
Confidence            8899999999999976542  46678899999999999999999999999987531    379999999877654     


Q ss_pred             cccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccc---hhHHHHHHHHHHhh
Q 019722          188 RYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRERE---GFITDLVFFLTSKL  264 (336)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~---~~~~~~~~~~~~~~  264 (336)
                                  .+....|++||++++.+++.++.++.+.|  |+||+|+||++.|++.+...   ..........+..+
T Consensus       152 ------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~  217 (261)
T 1gee_A          152 ------------WPLFVHYAASKGGMKLMTETLALEYAPKG--IRVNNIGPGAINTPINAEKFADPEQRADVESMIPMGY  217 (261)
T ss_dssp             ------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECSBCSGGGHHHHHSHHHHHHHHTTCTTSS
T ss_pred             ------------CCCccHHHHHHHHHHHHHHHHHHHhcccC--eEEEEEeeCCcCCchhhhcccChhHHHHHHhcCCCCC
Confidence                        56678899999999999999999999887  99999999999999876431   11111111112234


Q ss_pred             cCChHHHHHHHHHHHhcCccccCCceeeccCccccc
Q 019722          265 LKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWT  300 (336)
Q Consensus       265 ~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~  300 (336)
                      ..+|+|+|..++++++ +...+++|+.+..+|+...
T Consensus       218 ~~~~~dva~~~~~l~~-~~~~~~~G~~~~v~gg~~~  252 (261)
T 1gee_A          218 IGEPEEIAAVAAWLAS-SEASYVTGITLFADGGMTL  252 (261)
T ss_dssp             CBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTGGG
T ss_pred             CcCHHHHHHHHHHHhC-ccccCCCCcEEEEcCCccc
Confidence            5689999999999987 6667899999999887543

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=100.00  E-value=6e-38  Score=276.86  Aligned_cols=238  Identities=23%  Similarity=0.290  Sum_probs=202.4

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEE-eeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCC
Q 019722           35 SVTAIITGATSGIGAETARVLAKRGARLVL-PARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNL  113 (336)
Q Consensus        35 gk~~lItGgs~gIG~aia~~L~~~G~~V~~-~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  113 (336)
                      ||++|||||++|||++++++|+++|++|++ .+|+.+..++..++++..  +.++.++++|++++++++++++++.+.++
T Consensus         1 ~k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   78 (244)
T 1edo_A            1 SPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAY--GGQAITFGGDVSKEADVEAMMKTAIDAWG   78 (244)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHH--TCEEEEEECCTTSHHHHHHHHHHHHHHSS
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc--CCcEEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence            689999999999999999999999999998 489988888777777655  45899999999999999999999999999


Q ss_pred             CccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcccccc
Q 019722          114 PLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLG  191 (336)
Q Consensus       114 ~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~  191 (336)
                      ++|+||||||.....  .+.+.++|++.+++|+.+++.+++++.|.|.+++     .++||++||..+..+         
T Consensus        79 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-----~~~iv~~sS~~~~~~---------  144 (244)
T 1edo_A           79 TIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKR-----KGRIINIASVVGLIG---------  144 (244)
T ss_dssp             CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-----CEEEEEECCTHHHHC---------
T ss_pred             CCCEEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcC-----CCEEEEECChhhcCC---------
Confidence            999999999976543  4567889999999999999999999999998765     489999999887765         


Q ss_pred             cccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhH-HHHHHHHHHhhcCChHH
Q 019722          192 QISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFI-TDLVFFLTSKLLKTIPQ  270 (336)
Q Consensus       192 ~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~-~~~~~~~~~~~~~~~~~  270 (336)
                              .+....|+++|++++.+++.++.++.+.|  |++|+|+||++.|++........ .......+..+...|+|
T Consensus       145 --------~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~d  214 (244)
T 1edo_A          145 --------NIGQANYAAAKAGVIGFSKTAAREGASRN--INVNVVCPGFIASDMTAKLGEDMEKKILGTIPLGRTGQPEN  214 (244)
T ss_dssp             --------CTTCHHHHHHHHHHHHHHHHHHHHHHTTT--EEEEEEEECSBCSHHHHTTCHHHHHHHHTSCTTCSCBCHHH
T ss_pred             --------CCCCccchhhHHHHHHHHHHHHHHhhhcC--CEEEEEeeCccccchhhhcChHHHHHHhhcCCCCCCCCHHH
Confidence                    55677899999999999999999999877  99999999999999876543221 11111122234568999


Q ss_pred             HHHHHHHHHhcCccccCCceeeccCccc
Q 019722          271 GAATTCYVAIHPRLVNVSGKYFADCNEA  298 (336)
Q Consensus       271 ~a~~~~~l~~~~~~~~~~G~~~~~~~~~  298 (336)
                      +|..+++++.++...+++|+.+..+|+.
T Consensus       215 va~~~~~l~~~~~~~~~~G~~~~v~gG~  242 (244)
T 1edo_A          215 VAGLVEFLALSPAASYITGQAFTIDGGI  242 (244)
T ss_dssp             HHHHHHHHHHCSGGGGCCSCEEEESTTT
T ss_pred             HHHHHHHHhCCCccCCcCCCEEEeCCCc
Confidence            9999999997688889999999888764

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=100.00  E-value=4e-38  Score=277.59  Aligned_cols=230  Identities=22%  Similarity=0.239  Sum_probs=191.5

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCCC
Q 019722           35 SVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLP  114 (336)
Q Consensus        35 gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  114 (336)
                      +|++|||||++|||++++++|+++|++|++++|+.++.   .+++     +  +.++++|+++ ++++++++++.+.+++
T Consensus         2 ~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~~---~~~~-----~--~~~~~~D~~~-~~~~~~~~~~~~~~g~   70 (239)
T 2ekp_A            2 ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEEA---AQSL-----G--AVPLPTDLEK-DDPKGLVKRALEALGG   70 (239)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHH---HHHH-----T--CEEEECCTTT-SCHHHHHHHHHHHHTS
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH---HHhh-----C--cEEEecCCch-HHHHHHHHHHHHHcCC
Confidence            68999999999999999999999999999999997752   2222     2  7889999999 9999999999888899


Q ss_pred             ccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccccccc
Q 019722          115 LNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQ  192 (336)
Q Consensus       115 id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~~  192 (336)
                      +|+||||||+....  .+.+.++|++++++|+.+++.++++++|.|++++     .++||++||..+..+..        
T Consensus        71 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-----~g~iv~isS~~~~~~~~--------  137 (239)
T 2ekp_A           71 LHVLVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAG-----WGRVLFIGSVTTFTAGG--------  137 (239)
T ss_dssp             CCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-----CEEEEEECCGGGTSCCT--------
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-----CcEEEEECchhhccCCC--------
Confidence            99999999976532  5678899999999999999999999999998865     48999999987765410        


Q ss_pred             ccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccc---hhHHHHHHHHHHhhcCChH
Q 019722          193 ISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRERE---GFITDLVFFLTSKLLKTIP  269 (336)
Q Consensus       193 ~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~---~~~~~~~~~~~~~~~~~~~  269 (336)
                             .+....|++||++++.|+++++.|+++.|  |+||+|+||++.|++.....   ..........+..+..+|+
T Consensus       138 -------~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~  208 (239)
T 2ekp_A          138 -------PVPIPAYTTAKTALLGLTRALAKEWARLG--IRVNLLCPGYVETEFTLPLRQNPELYEPITARIPMGRWARPE  208 (239)
T ss_dssp             -------TSCCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCSGGGHHHHTCHHHHHHHHTTCTTSSCBCHH
T ss_pred             -------CCCCccHHHHHHHHHHHHHHHHHHhhhcC--cEEEEEEeCCccCchhhccccCHHHHHHHHhcCCCCCCcCHH
Confidence                   25677899999999999999999999988  99999999999999865421   1111111112233457899


Q ss_pred             HHHHHHHHHHhcCccccCCceeeccCccc
Q 019722          270 QGAATTCYVAIHPRLVNVSGKYFADCNEA  298 (336)
Q Consensus       270 ~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  298 (336)
                      |+|..++++++ +...+++|+.+..+|+.
T Consensus       209 dvA~~~~~l~s-~~~~~~tG~~~~vdgG~  236 (239)
T 2ekp_A          209 EIARVAAVLCG-DEAEYLTGQAVAVDGGF  236 (239)
T ss_dssp             HHHHHHHHHTS-GGGTTCCSCEEEESTTT
T ss_pred             HHHHHHHHHcC-chhcCCCCCEEEECCCc
Confidence            99999999987 66789999999998874

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=100.00  E-value=1e-37  Score=276.99  Aligned_cols=238  Identities=25%  Similarity=0.299  Sum_probs=199.5

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCce-EEEeccCCCHHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDI-VVLPLDLSSLSSVRNFVSQF  108 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~-~~~~~Dl~~~~~v~~~~~~~  108 (336)
                      +++++||++|||||++|||++++++|+++|++|++++|+.+++++..+++     +.++ .++++|++++++++++++++
T Consensus         6 ~~~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~~~   80 (254)
T 2wsb_A            6 VFRLDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQEL-----GAAVAARIVADVTDAEAMTAAAAEA   80 (254)
T ss_dssp             TTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----GGGEEEEEECCTTCHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----cccceeEEEEecCCHHHHHHHHHHH
Confidence            56789999999999999999999999999999999999998887776665     3466 88999999999999999999


Q ss_pred             HhcCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCc
Q 019722          109 HSLNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDM  186 (336)
Q Consensus       109 ~~~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~  186 (336)
                      .+ ++++|+||||||+....  .+.+.++|++.+++|+.+++.++++++|.|++++     .++||++||..+..+    
T Consensus        81 ~~-~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-----~~~iv~isS~~~~~~----  150 (254)
T 2wsb_A           81 EA-VAPVSILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARG-----AGAIVNLGSMSGTIV----  150 (254)
T ss_dssp             HH-HSCCCEEEECCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-----CEEEEEECCGGGTSC----
T ss_pred             Hh-hCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-----CcEEEEEecchhccC----
Confidence            88 88999999999976543  5667889999999999999999999999998875     489999999877654    


Q ss_pred             ccccccccCCCCCCChh--hHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccc---hhHHHHHHHHH
Q 019722          187 IRYLGQISRNKSHYDAT--RAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRERE---GFITDLVFFLT  261 (336)
Q Consensus       187 ~~~~~~~~~~~~~~~~~--~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~---~~~~~~~~~~~  261 (336)
                                   .+..  ..|++||++++.++++++.++.+.|  |++|+|+||++.|++.+...   ..........+
T Consensus       151 -------------~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~  215 (254)
T 2wsb_A          151 -------------NRPQFASSYMASKGAVHQLTRALAAEWAGRG--VRVNALAPGYVATEMTLKMRERPELFETWLDMTP  215 (254)
T ss_dssp             -------------CSSSCBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCBCSHHHHHHHTCHHHHHHHHHTST
T ss_pred             -------------CCCCcchHHHHHHHHHHHHHHHHHHHHhhcC--eEEEEEEecccCchhhhccccChHHHHHHHhcCC
Confidence                         2333  7899999999999999999999887  99999999999999865432   11111111122


Q ss_pred             HhhcCChHHHHHHHHHHHhcCccccCCceeeccCccc
Q 019722          262 SKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEA  298 (336)
Q Consensus       262 ~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  298 (336)
                      ..+..+|+|+|..++++++ +...+++|+.+..+|+.
T Consensus       216 ~~~~~~~~dva~~~~~l~~-~~~~~~~G~~~~v~gG~  251 (254)
T 2wsb_A          216 MGRCGEPSEIAAAALFLAS-PAASYVTGAILAVDGGY  251 (254)
T ss_dssp             TSSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTG
T ss_pred             CCCCCCHHHHHHHHHHHhC-cccccccCCEEEECCCE
Confidence            2345689999999999987 55678999999988874

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=100.00  E-value=5.9e-38  Score=280.12  Aligned_cols=251  Identities=20%  Similarity=0.220  Sum_probs=203.2

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      .+++++|++|||||++|||++++++|+++|++|++++|+.++..+..+++.+.. +.++.++++|++++++++++++++.
T Consensus         9 ~~~~~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~   87 (265)
T 1h5q_A            9 TISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEF-GVKTKAYQCDVSNTDIVTKTIQQID   87 (265)
T ss_dssp             EECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHH-TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CcccCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhc-CCeeEEEEeeCCCHHHHHHHHHHHH
Confidence            457899999999999999999999999999999999997766665566665433 4579999999999999999999999


Q ss_pred             hcCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcc
Q 019722          110 SLNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMI  187 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~  187 (336)
                      +.++++|+||||||+....  .+.+.++|++.+++|+.+++.++++++|.|.+++.    .++||++||..+..+.+...
T Consensus        88 ~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~----~~~iv~~sS~~~~~~~~~~~  163 (265)
T 1h5q_A           88 ADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQ----KGSIVVTSSMSSQIINQSSL  163 (265)
T ss_dssp             HHSCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC----CEEEEEECCGGGTSCCEEET
T ss_pred             HhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCC----CceEEEeCCchhhccccccc
Confidence            9899999999999976543  46688899999999999999999999999987641    37999999987665421000


Q ss_pred             cccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHH-HHHHHHHHhhcC
Q 019722          188 RYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFIT-DLVFFLTSKLLK  266 (336)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~-~~~~~~~~~~~~  266 (336)
                                ....+...|++||++++.+++.++.++.+.|  |+||+|+||++.|++.+....... ......+..+..
T Consensus       164 ----------~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~  231 (265)
T 1h5q_A          164 ----------NGSLTQVFYNSSKAACSNLVKGLAAEWASAG--IRVNALSPGYVNTDQTAHMDKKIRDHQASNIPLNRFA  231 (265)
T ss_dssp             ----------TEECSCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCGGGGGSCHHHHHHHHHTCTTSSCB
T ss_pred             ----------cccccccccHHHHHHHHHHHHHHHHHHHhcC--cEEEEEecCccccccccccchhHHHHHHhcCcccCCC
Confidence                      0022367899999999999999999999888  999999999999999776422211 111112233456


Q ss_pred             ChHHHHHHHHHHHhcCccccCCceeeccCccc
Q 019722          267 TIPQGAATTCYVAIHPRLVNVSGKYFADCNEA  298 (336)
Q Consensus       267 ~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  298 (336)
                      +|+|+|..++++++ +...+++|+.+..+|+.
T Consensus       232 ~~~dva~~~~~l~~-~~~~~~~G~~~~v~gG~  262 (265)
T 1h5q_A          232 QPEEMTGQAILLLS-DHATYMTGGEYFIDGGQ  262 (265)
T ss_dssp             CGGGGHHHHHHHHS-GGGTTCCSCEEEECTTG
T ss_pred             CHHHHHHHHHhhcc-CchhcCcCcEEEecCCE
Confidence            89999999999987 55678999999888874

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=100.00  E-value=2.9e-37  Score=277.69  Aligned_cols=244  Identities=24%  Similarity=0.273  Sum_probs=203.4

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      .+++++|++|||||++|||++++++|+++|++|++++|+.+..++..+++..   ..++.++++|++++++++++++++.
T Consensus        11 ~~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~   87 (278)
T 2bgk_A           11 TNRLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGS---PDVISFVHCDVTKDEDVRNLVDTTI   87 (278)
T ss_dssp             CCTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC---TTTEEEEECCTTCHHHHHHHHHHHH
T ss_pred             cccccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhCC---CCceEEEECCCCCHHHHHHHHHHHH
Confidence            5678999999999999999999999999999999999998877766666532   2379999999999999999999999


Q ss_pred             hcCCCccEEEEcccCCCC----CCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCC
Q 019722          110 SLNLPLNLLINNAGKFAH----QHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGD  185 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~~----~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~  185 (336)
                      +.++++|+||||||....    ..+.+.++|++.+++|+.+++.++++++|.|.+++     .++||++||..+..+   
T Consensus        88 ~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-----~~~iv~isS~~~~~~---  159 (278)
T 2bgk_A           88 AKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAK-----KGSIVFTASISSFTA---  159 (278)
T ss_dssp             HHHSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGT-----CEEEEEECCGGGTCC---
T ss_pred             HHcCCCCEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcC-----CCeEEEEeeccccCC---
Confidence            889999999999997642    25667889999999999999999999999998754     589999999877654   


Q ss_pred             cccccccccCCCCCCC-hhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHHHHHHH---
Q 019722          186 MIRYLGQISRNKSHYD-ATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLT---  261 (336)
Q Consensus       186 ~~~~~~~~~~~~~~~~-~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~---  261 (336)
                                    .+ ....|++||++++.+++.++.|+++.|  |++|+|+||++.|++..............+.   
T Consensus       160 --------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~  223 (278)
T 2bgk_A          160 --------------GEGVSHVYTATKHAVLGLTTSLCTELGEYG--IRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQA  223 (278)
T ss_dssp             --------------CTTSCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHT
T ss_pred             --------------CCCCCcchHHHHHHHHHHHHHHHHHHhhcC--cEEEEEEeceecchhhhhhcccchhHHHHhhhcc
Confidence                          33 567899999999999999999999888  9999999999999987764221111111111   


Q ss_pred             ---HhhcCChHHHHHHHHHHHhcCccccCCceeeccCcccccc
Q 019722          262 ---SKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWTS  301 (336)
Q Consensus       262 ---~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~~  301 (336)
                         ......|+|+|.++++++. +...+++|+.+..+|+...+
T Consensus       224 ~~~~~~~~~~~dva~~~~~l~~-~~~~~~~G~~~~v~gg~~~~  265 (278)
T 2bgk_A          224 ANLKGTLLRAEDVADAVAYLAG-DESKYVSGLNLVIDGGYTRT  265 (278)
T ss_dssp             CSSCSCCCCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTGGGC
T ss_pred             cccccccCCHHHHHHHHHHHcC-cccccCCCCEEEECCccccc
Confidence               1335789999999999987 55678999999999876544

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=100.00  E-value=5.5e-38  Score=285.90  Aligned_cols=269  Identities=17%  Similarity=0.186  Sum_probs=214.0

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      .++++||++|||||++|||++++++|+++|++|++++|+.+++++..+++.... +.++.++++|++++++++++++++.
T Consensus        21 ~~~l~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~   99 (302)
T 1w6u_A           21 PNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQT-GNKVHAIQCDVRDPDMVQNTVSELI   99 (302)
T ss_dssp             TTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH-SSCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             cccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhc-CCceEEEEeCCCCHHHHHHHHHHHH
Confidence            567999999999999999999999999999999999999998888888776643 3579999999999999999999999


Q ss_pred             hcCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcc
Q 019722          110 SLNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMI  187 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~  187 (336)
                      +.++++|+||||||.....  .+.+.++|++.+++|+.+++.++++++|.|.++..    .++||++||..+..+     
T Consensus       100 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~----~~~iv~isS~~~~~~-----  170 (302)
T 1w6u_A          100 KVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQK----GAAFLSITTIYAETG-----  170 (302)
T ss_dssp             HHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC----CEEEEEECCTHHHHC-----
T ss_pred             HHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcC----CCEEEEEcccccccC-----
Confidence            9999999999999975432  46778899999999999999999999999974321    479999999877665     


Q ss_pred             cccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCC-CCCccch-hH--HHHHHHHHHh
Q 019722          188 RYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTR-LTREREG-FI--TDLVFFLTSK  263 (336)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~-~~~~~~~-~~--~~~~~~~~~~  263 (336)
                                  .+....|++||++++.+++.++.++++.|  |+||+|+||++.|+ +...... ..  .......+..
T Consensus       171 ------------~~~~~~Y~~sK~a~~~~~~~la~~~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~p~~  236 (302)
T 1w6u_A          171 ------------SGFVVPSASAKAGVEAMSKSLAAEWGKYG--MRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPCG  236 (302)
T ss_dssp             ------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCBCC------CCTTSHHHHHHHTTCTTS
T ss_pred             ------------CCCcchhHHHHHHHHHHHHHHHHHhhhcC--cEEEEEeeccCCCcchhhhcccchhhHHHHHhcCCcC
Confidence                        56677899999999999999999999888  99999999999998 4443211 11  1111122233


Q ss_pred             hcCChHHHHHHHHHHHhcCccccCCceeeccCcccccc--cCC-CCHHHHHHHHHHHHHhhcc
Q 019722          264 LLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWTS--KLG-SNSNEASRLWAASELLVSR  323 (336)
Q Consensus       264 ~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~~--~~~-~~~~~~~~~w~~~~~~~~~  323 (336)
                      +..+|+|+|.++++++. +...+++|+.+..+|+...+  ... ...+.....|+.++++++.
T Consensus       237 ~~~~~~dva~~~~~l~~-~~~~~~~G~~~~v~gg~~~~~~~~~~~~~~~~g~~~~~~~~~~~~  298 (302)
T 1w6u_A          237 RLGTVEELANLAAFLCS-DYASWINGAVIKFDGGEEVLISGEFNDLRKVTKEQWDTIEELIRK  298 (302)
T ss_dssp             SCBCHHHHHHHHHHHTS-GGGTTCCSCEEEESTTHHHHHHSTTGGGGGCCHHHHHHHTTC---
T ss_pred             CCCCHHHHHHHHHHHcC-CcccccCCCEEEECCCeeeccCCccccchhhccccccChhhhccC
Confidence            45689999999999987 56678999999888874332  211 1234456789988887764

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=100.00  E-value=6.9e-38  Score=276.97  Aligned_cols=241  Identities=24%  Similarity=0.295  Sum_probs=187.6

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEe-eCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGARLVLP-ARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~-~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      |+++||++|||||++|||++++++|+++|++|+++ .|+.+..++..++++..  +.++.++++|++|+++++++++++.
T Consensus         1 M~l~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~   78 (247)
T 2hq1_A            1 MQLKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAA--GINVVVAKGDVKNPEDVENMVKTAM   78 (247)
T ss_dssp             CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHT--TCCEEEEESCTTSHHHHHHHHHHHH
T ss_pred             CCCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHHHHHHHHH
Confidence            46889999999999999999999999999999999 67777777777777654  5689999999999999999999999


Q ss_pred             hcCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcc
Q 019722          110 SLNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMI  187 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~  187 (336)
                      +.++++|+||||||.....  .+.+.++|++.+++|+.+++.++++++|.|++++     .++||++||..+.++     
T Consensus        79 ~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-----~~~iv~~sS~~~~~~-----  148 (247)
T 2hq1_A           79 DAFGRIDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQK-----SGKIINITSIAGIIG-----  148 (247)
T ss_dssp             HHHSCCCEEEECC---------------CHHHHHHTHHHHHHHHHHHHHHHHHHT-----CEEEEEECC-----------
T ss_pred             HhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-----CcEEEEEcChhhccC-----
Confidence            8899999999999976432  4567788999999999999999999999998765     489999999877765     


Q ss_pred             cccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHH-HHHHHHHhhcC
Q 019722          188 RYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITD-LVFFLTSKLLK  266 (336)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~-~~~~~~~~~~~  266 (336)
                                  .+....|+++|++++.++++++.++.+.|  |++|+|+||++.|++.......... .....+.....
T Consensus       149 ------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~  214 (247)
T 2hq1_A          149 ------------NAGQANYAASKAGLIGFTKSIAKEFAAKG--IYCNAVAPGIIKTDMTDVLPDKVKEMYLNNIPLKRFG  214 (247)
T ss_dssp             ---------------CHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCHHHHTSCHHHHHHHHTTSTTSSCB
T ss_pred             ------------CCCCcHhHHHHHHHHHHHHHHHHHHHHcC--cEEEEEEEEEEeccchhhcchHHHHHHHhhCCCCCCC
Confidence                        55677899999999999999999999887  9999999999999986654322111 11112233456


Q ss_pred             ChHHHHHHHHHHHhcCccccCCceeeccCccc
Q 019722          267 TIPQGAATTCYVAIHPRLVNVSGKYFADCNEA  298 (336)
Q Consensus       267 ~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  298 (336)
                      +++|++..+++++. +...+++|+.+..+|+.
T Consensus       215 ~~~dva~~~~~l~~-~~~~~~~G~~~~v~gG~  245 (247)
T 2hq1_A          215 TPEEVANVVGFLAS-DDSNYITGQVINIDGGL  245 (247)
T ss_dssp             CHHHHHHHHHHHHS-GGGTTCCSCEEEESTTC
T ss_pred             CHHHHHHHHHHHcC-cccccccCcEEEeCCCc
Confidence            89999999999987 55678899999888764

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=100.00  E-value=1.5e-37  Score=275.22  Aligned_cols=238  Identities=24%  Similarity=0.274  Sum_probs=199.2

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCCC
Q 019722           35 SVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLP  114 (336)
Q Consensus        35 gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  114 (336)
                      +|++|||||++|||++++++|+++|++|++++|+.+++++..+++.... +.++.++++|++++++++++++++.+.+++
T Consensus         2 ~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (250)
T 2cfc_A            2 SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAY-ADKVLRVRADVADEGDVNAAIAATMEQFGA   80 (250)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTT-GGGEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhc-CCcEEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            6899999999999999999999999999999999988887777762222 457999999999999999999999998999


Q ss_pred             ccEEEEcccCCCC-----CCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcccc
Q 019722          115 LNLLINNAGKFAH-----QHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRY  189 (336)
Q Consensus       115 id~lv~nAg~~~~-----~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~  189 (336)
                      +|+||||||....     ..+.+.++|++.+++|+.+++.++++++|.|++++     .++||++||..+..+       
T Consensus        81 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-----~~~iv~isS~~~~~~-------  148 (250)
T 2cfc_A           81 IDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQG-----AGVIVNIASVASLVA-------  148 (250)
T ss_dssp             CCEEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-----CEEEEEECCGGGTSC-------
T ss_pred             CCEEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-----CCEEEEECChhhccC-------
Confidence            9999999997643     23557789999999999999999999999998865     489999999877655       


Q ss_pred             cccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCcc-c--hhHHHHHHHHHHhhcC
Q 019722          190 LGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRER-E--GFITDLVFFLTSKLLK  266 (336)
Q Consensus       190 ~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~-~--~~~~~~~~~~~~~~~~  266 (336)
                                .++...|+++|++++.++++++.++.+.|  |+||+|+||++.|++.+.. .  ..........+..+..
T Consensus       149 ----------~~~~~~Y~~sK~a~~~~~~~l~~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (250)
T 2cfc_A          149 ----------FPGRSAYTTSKGAVLQLTKSVAVDYAGSG--IRCNAVCPGMIETPMTQWRLDQPELRDQVLARIPQKEIG  216 (250)
T ss_dssp             ----------CTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCSTTTHHHHTSHHHHHHHHTTCTTCSCB
T ss_pred             ----------CCCchhHHHHHHHHHHHHHHHHHHhcccC--eEEEEEEeCcCccCccccccCCHHHHHHHHhcCCCCCCc
Confidence                      56677899999999999999999999887  9999999999999986541 1  1111111112223456


Q ss_pred             ChHHHHHHHHHHHhcCccccCCceeeccCccc
Q 019722          267 TIPQGAATTCYVAIHPRLVNVSGKYFADCNEA  298 (336)
Q Consensus       267 ~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  298 (336)
                      +|+|+|..+++++. +...+++|+.+..+|+.
T Consensus       217 ~~~dva~~~~~l~~-~~~~~~~G~~~~v~gG~  247 (250)
T 2cfc_A          217 TAAQVADAVMFLAG-EDATYVNGAALVMDGAY  247 (250)
T ss_dssp             CHHHHHHHHHHHHS-TTCTTCCSCEEEESTTG
T ss_pred             CHHHHHHHHHHHcC-chhhcccCCEEEECCce
Confidence            89999999999987 55678999999888874

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=100.00  E-value=1.9e-38  Score=278.00  Aligned_cols=223  Identities=19%  Similarity=0.163  Sum_probs=182.2

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCCCc
Q 019722           36 VTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLPL  115 (336)
Q Consensus        36 k~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i  115 (336)
                      |++|||||++|||++++++|+++|++|++++|+.+++++..+++     +.++.++.+|++++++++++++++.+.   .
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~v~~~~~~~~~~---~   73 (230)
T 3guy_A            2 SLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCL-----SNNVGYRARDLASHQEVEQLFEQLDSI---P   73 (230)
T ss_dssp             -CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTC-----SSCCCEEECCTTCHHHHHHHHHSCSSC---C
T ss_pred             CEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH-----hhccCeEeecCCCHHHHHHHHHHHhhc---C
Confidence            78999999999999999999999999999999998887766554     467899999999999999999877553   3


Q ss_pred             cEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcccccccc
Q 019722          116 NLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQI  193 (336)
Q Consensus       116 d~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~~~  193 (336)
                      |+||||||+....  .+.+.++|++++++|+.+++.++++++|.|++++      ++||++||..+..+           
T Consensus        74 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~------~~iv~isS~~~~~~-----------  136 (230)
T 3guy_A           74 STVVHSAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQP------VNVVMIMSTAAQQP-----------  136 (230)
T ss_dssp             SEEEECCCCCCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSC------CEEEEECCGGGTSC-----------
T ss_pred             CEEEEeCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC------CeEEEEeecccCCC-----------
Confidence            9999999976543  5678899999999999999999999999997753      59999999887765           


Q ss_pred             cCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHHHHHHHHhhcCChHHHHH
Q 019722          194 SRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSKLLKTIPQGAA  273 (336)
Q Consensus       194 ~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~  273 (336)
                            .+....|++||++++.|+++++.|+++.|  |+||+|+||+++|++.+....       ..+..+..+|+|+|.
T Consensus       137 ------~~~~~~Y~asKaa~~~~~~~la~e~~~~g--i~v~~v~PG~v~t~~~~~~~~-------~~~~~~~~~~~dvA~  201 (230)
T 3guy_A          137 ------KAQESTYCAVKWAVKGLIESVRLELKGKP--MKIIAVYPGGMATEFWETSGK-------SLDTSSFMSAEDAAL  201 (230)
T ss_dssp             ------CTTCHHHHHHHHHHHHHHHHHHHHTTTSS--CEEEEEEECCC-----------------------CCCHHHHHH
T ss_pred             ------CCCCchhHHHHHHHHHHHHHHHHHHHhcC--eEEEEEECCcccChHHHhcCC-------CCCcccCCCHHHHHH
Confidence                  66778999999999999999999999887  999999999999999776322       233456789999999


Q ss_pred             HHHHHHhcCccccCCceeeccCccc
Q 019722          274 TTCYVAIHPRLVNVSGKYFADCNEA  298 (336)
Q Consensus       274 ~~~~l~~~~~~~~~~G~~~~~~~~~  298 (336)
                      .+++++.++...+++|+.+..+...
T Consensus       202 ~i~~l~~~~~~~~itg~~~~~~~~~  226 (230)
T 3guy_A          202 MIHGALANIGNGYVSDITVNREGHH  226 (230)
T ss_dssp             HHHHHCCEETTEEEEEEEEEC----
T ss_pred             HHHHHHhCcCCCCccceeecCCCCC
Confidence            9999999899999999999776653

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=100.00  E-value=2.6e-38  Score=279.73  Aligned_cols=228  Identities=15%  Similarity=0.130  Sum_probs=189.0

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEe-e--CChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhc
Q 019722           35 SVTAIITGATSGIGAETARVLAKRGARLVLP-A--RSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSL  111 (336)
Q Consensus        35 gk~~lItGgs~gIG~aia~~L~~~G~~V~~~-~--r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  111 (336)
                      ||++|||||++|||++++++|+++|++|+++ +  |+.+++++..+++  .  +.       |+.|+++++++++++.+.
T Consensus         1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~~~~~--~--~~-------~~~~~~~v~~~~~~~~~~   69 (244)
T 1zmo_A            1 MVIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESEN--P--GT-------IALAEQKPERLVDATLQH   69 (244)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHS--T--TE-------EECCCCCGGGHHHHHGGG
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHHHHHh--C--CC-------cccCHHHHHHHHHHHHHH
Confidence            5899999999999999999999999999999 6  9988877666554  1  21       233778888999999999


Q ss_pred             CCCccEEEEcccCCCC-----CCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCc
Q 019722          112 NLPLNLLINNAGKFAH-----QHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDM  186 (336)
Q Consensus       112 ~~~id~lv~nAg~~~~-----~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~  186 (336)
                      ++++|+||||||+...     ..+.+.++|++++++|+.+++.++++++|.|++++     .|+||++||..+..+    
T Consensus        70 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~-----~g~iv~isS~~~~~~----  140 (244)
T 1zmo_A           70 GEAIDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAG-----GASVIFITSSVGKKP----  140 (244)
T ss_dssp             SSCEEEEEECCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-----CEEEEEECCGGGTSC----
T ss_pred             cCCCCEEEECCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-----CcEEEEECChhhCCC----
Confidence            9999999999997654     25678899999999999999999999999998765     589999999887765    


Q ss_pred             ccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCC---Cccc--hhHHHHHH-HH
Q 019722          187 IRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLT---RERE--GFITDLVF-FL  260 (336)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~---~~~~--~~~~~~~~-~~  260 (336)
                                   .+....|++||++++.|+++++.|+++.|  |+||+|+||+|+|++.   +...  ........ ..
T Consensus       141 -------------~~~~~~Y~asK~a~~~~~~~la~e~~~~g--i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~  205 (244)
T 1zmo_A          141 -------------LAYNPLYGPARAATVALVESAAKTLSRDG--ILLYAIGPNFFNNPTYFPTSDWENNPELRERVDRDV  205 (244)
T ss_dssp             -------------CTTCTTHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEESSBCBTTTBCHHHHHHCHHHHHHHHHHC
T ss_pred             -------------CCCchHHHHHHHHHHHHHHHHHHHHhhcC--cEEEEEeeCCCcCCcccccccccchHHHHHHHhcCC
Confidence                         56677899999999999999999999988  9999999999999997   4321  11111111 22


Q ss_pred             HHhhcCChHHHHHHHHHHHhcCccccCCceeeccCccc
Q 019722          261 TSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEA  298 (336)
Q Consensus       261 ~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  298 (336)
                      +..+..+|+|+|..++|+++ +...+++|+++.++|+.
T Consensus       206 p~~r~~~pe~vA~~v~~l~s-~~~~~~tG~~i~vdgG~  242 (244)
T 1zmo_A          206 PLGRLGRPDEMGALITFLAS-RRAAPIVGQFFAFTGGY  242 (244)
T ss_dssp             TTCSCBCHHHHHHHHHHHHT-TTTGGGTTCEEEESTTC
T ss_pred             CCCCCcCHHHHHHHHHHHcC-ccccCccCCEEEeCCCC
Confidence            33456789999999999997 67789999999998874

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=100.00  E-value=4.4e-38  Score=282.63  Aligned_cols=237  Identities=24%  Similarity=0.276  Sum_probs=190.2

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHh
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHS  110 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  110 (336)
                      .+|+ |++|||||++|||++++++|+++|++|++++|+.+++++..+++...   .++.++++|++|+++++++++++.+
T Consensus        18 ~~~~-k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~Dv~d~~~v~~~~~~~~~   93 (272)
T 2nwq_A           18 SHMS-STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAK---TRVLPLTLDVRDRAAMSAAVDNLPE   93 (272)
T ss_dssp             ---C-CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTT---SCEEEEECCTTCHHHHHHHHHTCCG
T ss_pred             CCcC-cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcC---CcEEEEEcCCCCHHHHHHHHHHHHH
Confidence            4566 99999999999999999999999999999999998888877777542   4789999999999999999999988


Q ss_pred             cCCCccEEEEcccCCCC---CCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCC-eEEEEcCCccccccCCc
Q 019722          111 LNLPLNLLINNAGKFAH---QHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQG-RIVNVSSSIHSWFSGDM  186 (336)
Q Consensus       111 ~~~~id~lv~nAg~~~~---~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~g-rIV~vsS~~~~~~~~~~  186 (336)
                      .++++|+||||||+...   ..+.+.++|++++++|+.+++.++++++|.|++++     .| +||++||..+..+    
T Consensus        94 ~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~-----~g~~IV~isS~~~~~~----  164 (272)
T 2nwq_A           94 EFATLRGLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHG-----AGASIVNLGSVAGKWP----  164 (272)
T ss_dssp             GGSSCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHC-----TTCEEEEECCGGGTSC----
T ss_pred             HhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-----CCcEEEEeCCchhccC----
Confidence            89999999999997642   25678899999999999999999999999998764     47 9999999887765    


Q ss_pred             ccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccch-hHHHHHHHHHHhhc
Q 019722          187 IRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREG-FITDLVFFLTSKLL  265 (336)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~-~~~~~~~~~~~~~~  265 (336)
                                   .+....|+++|++++.|+++++.|+++.|  |+||+|+||+++|++...... ..............
T Consensus       165 -------------~~~~~~Y~asKaa~~~l~~~la~el~~~g--Irvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~  229 (272)
T 2nwq_A          165 -------------YPGSHVYGGTKAFVEQFSLNLRCDLQGTG--VRVTNLEPGLCESEFSLVRFGGDQARYDKTYAGAHP  229 (272)
T ss_dssp             -------------CTTCHHHHHHHHHHHHHHHHHHTTCTTSC--CEEEEEEECSBC--------------------CCCC
T ss_pred             -------------CCCCchHHHHHHHHHHHHHHHHHHhCccC--eEEEEEEcCCCcCcchhcccccchHHHHHhhccCCC
Confidence                         56678899999999999999999999887  999999999999998654211 00001111111224


Q ss_pred             CChHHHHHHHHHHHhcCccccCCceeeccCcc
Q 019722          266 KTIPQGAATTCYVAIHPRLVNVSGKYFADCNE  297 (336)
Q Consensus       266 ~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~  297 (336)
                      .+|+|+|..++|+++.  ..+++|+.+..++.
T Consensus       230 ~~pedvA~~v~~l~s~--~~~~~g~~i~v~~~  259 (272)
T 2nwq_A          230 IQPEDIAETIFWIMNQ--PAHLNINSLEIMPV  259 (272)
T ss_dssp             BCHHHHHHHHHHHHTS--CTTEEEEEEEEEET
T ss_pred             CCHHHHHHHHHHHhCC--CccCccceEEEeec
Confidence            6899999999999984  36789988877765

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=100.00  E-value=9.7e-38  Score=278.86  Aligned_cols=244  Identities=22%  Similarity=0.218  Sum_probs=197.1

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      .+++++|++|||||++|||++++++|+++|++|++++|+.+++++..+++     +.++.++++|++++++++++++++.
T Consensus         7 ~~~~~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~v~~~~~~~~   81 (265)
T 2o23_A            7 CRSVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKL-----GNNCVFAPADVTSEKDVQTALALAK   81 (265)
T ss_dssp             -CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHH-----CTTEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHh-----CCceEEEEcCCCCHHHHHHHHHHHH
Confidence            56899999999999999999999999999999999999988777766655     4579999999999999999999999


Q ss_pred             hcCCCccEEEEcccCCCCC--C------CCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhcc-CCCCCeEEEEcCCccc
Q 019722          110 SLNLPLNLLINNAGKFAHQ--H------AISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKA-TGIQGRIVNVSSSIHS  180 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~~~--~------~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~-~~~~grIV~vsS~~~~  180 (336)
                      +.++++|+||||||+....  .      +.+.++|++.+++|+.+++.+++++.|.|+++... ....++||++||..+.
T Consensus        82 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~  161 (265)
T 2o23_A           82 GKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAF  161 (265)
T ss_dssp             HHHSCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHH
T ss_pred             HHCCCCCEEEECCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCCCcEEEEeCChhhc
Confidence            9899999999999976543  1      35778999999999999999999999999875110 0025899999998876


Q ss_pred             cccCCcccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHH-HHHHH
Q 019722          181 WFSGDMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFIT-DLVFF  259 (336)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~-~~~~~  259 (336)
                      .+                 .++...|++||++++.+++.++.++++.|  |+||+|+||++.|++.+....... .....
T Consensus       162 ~~-----------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~  222 (265)
T 2o23_A          162 EG-----------------QVGQAAYSASKGGIVGMTLPIARDLAPIG--IRVMTIAPGLFGTPLLTSLPEKVCNFLASQ  222 (265)
T ss_dssp             HC-----------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCBCCC----------CHHHHT
T ss_pred             CC-----------------CCCCchhHHHHHHHHHHHHHHHHHHhhcC--cEEEEEEeccccCccccccCHHHHHHHHHc
Confidence            65                 56677899999999999999999999887  999999999999998765322111 11111


Q ss_pred             HHH-hhcCChHHHHHHHHHHHhcCccccCCceeeccCccccc
Q 019722          260 LTS-KLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWT  300 (336)
Q Consensus       260 ~~~-~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~  300 (336)
                      .+. .+..+|+|+|..+++++.   ..+++|+.+..+|+...
T Consensus       223 ~~~~~~~~~~~dva~~~~~l~~---~~~~~G~~i~vdgG~~~  261 (265)
T 2o23_A          223 VPFPSRLGDPAEYAHLVQAIIE---NPFLNGEVIRLDGAIRM  261 (265)
T ss_dssp             CSSSCSCBCHHHHHHHHHHHHH---CTTCCSCEEEESTTCCC
T ss_pred             CCCcCCCCCHHHHHHHHHHHhh---cCccCceEEEECCCEec
Confidence            222 445689999999999985   35789999999987543

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=100.00  E-value=1.6e-37  Score=275.71  Aligned_cols=243  Identities=22%  Similarity=0.242  Sum_probs=204.1

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      .+++++|++|||||++|||++++++|+++|++|++++|+.+.+++..++++..  +.++.++.+|++++++++++++++.
T Consensus         6 ~~~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~   83 (255)
T 1fmc_A            6 NLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQL--GGQAFACRCDITSEQELSALADFAI   83 (255)
T ss_dssp             GGCCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHh--CCceEEEEcCCCCHHHHHHHHHHHH
Confidence            45689999999999999999999999999999999999998888887777654  4578999999999999999999998


Q ss_pred             hcCCCccEEEEcccCCCCC-CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccc
Q 019722          110 SLNLPLNLLINNAGKFAHQ-HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIR  188 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~~~-~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~  188 (336)
                      +.++++|+||||||..... .+.+.++|++.+++|+.+++.++++++|.|++++     .++||++||..+..+      
T Consensus        84 ~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-----~~~iv~~sS~~~~~~------  152 (255)
T 1fmc_A           84 SKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNG-----GGVILTITSMAAENK------  152 (255)
T ss_dssp             HHHSSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-----CEEEEEECCGGGTCC------
T ss_pred             HhcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-----CcEEEEEcchhhcCC------
Confidence            8889999999999976542 3567889999999999999999999999998765     479999999876654      


Q ss_pred             ccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccc--hhHHHHHHHHHHhhcC
Q 019722          189 YLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRERE--GFITDLVFFLTSKLLK  266 (336)
Q Consensus       189 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~--~~~~~~~~~~~~~~~~  266 (336)
                                 .++...|+++|++++.+++.++.++.+.+  |++|+|+||++.|++.+...  ..........+.....
T Consensus       153 -----------~~~~~~Y~~sK~a~~~~~~~~~~~~~~~~--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~  219 (255)
T 1fmc_A          153 -----------NINMTSYASSKAAASHLVRNMAFDLGEKN--IRVNGIAPGAILTDALKSVITPEIEQKMLQHTPIRRLG  219 (255)
T ss_dssp             -----------CTTCHHHHHHHHHHHHHHHHHHHHHHTTT--EEEEEEEECSBCSHHHHTTCCHHHHHHHHHTCSSCSCB
T ss_pred             -----------CCCCcccHHHHHHHHHHHHHHHHHhhhcC--cEEEEEecccCcchhhhhccChHHHHHHHhcCCcccCC
Confidence                       55677899999999999999999999877  99999999999999865421  1111221122223456


Q ss_pred             ChHHHHHHHHHHHhcCccccCCceeeccCcccc
Q 019722          267 TIPQGAATTCYVAIHPRLVNVSGKYFADCNEAW  299 (336)
Q Consensus       267 ~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  299 (336)
                      .++|+|..+++++. +...+++|+.|..+++..
T Consensus       220 ~~~dva~~~~~l~~-~~~~~~~G~~~~v~gg~~  251 (255)
T 1fmc_A          220 QPQDIANAALFLCS-PAASWVSGQILTVSGGGV  251 (255)
T ss_dssp             CHHHHHHHHHHHHS-GGGTTCCSCEEEESTTSC
T ss_pred             CHHHHHHHHHHHhC-CccccCCCcEEEECCcee
Confidence            89999999999986 556788999998888654

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=100.00  E-value=3.4e-37  Score=283.07  Aligned_cols=234  Identities=21%  Similarity=0.240  Sum_probs=189.4

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      +++++||++|||||++|||++++++|+++|++|++++|+.+++++..+++.....+.++.++++|++++++++++++++.
T Consensus         3 m~~l~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   82 (319)
T 3ioy_A            3 LKDFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVE   82 (319)
T ss_dssp             CCCCTTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHH
Confidence            56799999999999999999999999999999999999999999999888876544589999999999999999999999


Q ss_pred             hcCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhc-cCCCCCeEEEEcCCccccccCCc
Q 019722          110 SLNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAK-ATGIQGRIVNVSSSIHSWFSGDM  186 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~-~~~~~grIV~vsS~~~~~~~~~~  186 (336)
                      +.++++|+||||||+....  .+.+.++|++++++|+.|++.++++++|.|.++.. .....|+||++||.++..+    
T Consensus        83 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~~~~----  158 (319)
T 3ioy_A           83 ARFGPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLA----  158 (319)
T ss_dssp             HHTCCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGGTCC----
T ss_pred             HhCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEecccccccC----
Confidence            9999999999999976543  56788999999999999999999999999987511 1122589999999988776    


Q ss_pred             ccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHH----------
Q 019722          187 IRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDL----------  256 (336)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~----------  256 (336)
                                   .+....|++||+++++|+++++.|+.+.|  |+|++|+||+|.|++...........          
T Consensus       159 -------------~~~~~~Y~aSKaal~~~~~~la~e~~~~g--i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~  223 (319)
T 3ioy_A          159 -------------AGSPGIYNTTKFAVRGLSESLHYSLLKYE--IGVSVLCPGLVKSYIYASDDIRPDALKGEVKPVDKT  223 (319)
T ss_dssp             -------------CSSSHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEECCCCBC------------------------
T ss_pred             -------------CCCCHHHHHHHHHHHHHHHHHHHHhhhcC--CEEEEEEcCeEccCcccccccCchhhcccccchhHH
Confidence                         66778999999999999999999999888  99999999999999977532111000          


Q ss_pred             -HHHHHH--hhcCChHHHHHHHHHHHhcC
Q 019722          257 -VFFLTS--KLLKTIPQGAATTCYVAIHP  282 (336)
Q Consensus       257 -~~~~~~--~~~~~~~~~a~~~~~l~~~~  282 (336)
                       ...+..  ....+|+++|..++..+..+
T Consensus       224 ~~~~~~~~~~~~~~pe~vA~~~~~al~~~  252 (319)
T 3ioy_A          224 AVERLAGVHEFGMEPDVIGARVIEAMKAN  252 (319)
T ss_dssp             -----CCGGGSSBCHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHhhhcCCCHHHHHHHHHHHHHcC
Confidence             000100  01158899999999998754

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=100.00  E-value=3.6e-37  Score=272.37  Aligned_cols=241  Identities=25%  Similarity=0.282  Sum_probs=203.2

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHh
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHS  110 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  110 (336)
                      +++++|++|||||++|||++++++|+++|++|++++|+.++.++..+++.... +.++.++.+|++++++++++++++.+
T Consensus         3 ~~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~   81 (248)
T 2pnf_A            3 IKLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKY-GVKAHGVEMNLLSEESINKAFEEIYN   81 (248)
T ss_dssp             CCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHH-CCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhc-CCceEEEEccCCCHHHHHHHHHHHHH
Confidence            46889999999999999999999999999999999999988887777765522 45799999999999999999999999


Q ss_pred             cCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccc
Q 019722          111 LNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIR  188 (336)
Q Consensus       111 ~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~  188 (336)
                      .++++|+||||||.....  .+.+.++|++.+++|+.+++.++++++|.|.+++     .++||++||..+..+      
T Consensus        82 ~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-----~~~iv~~sS~~~~~~------  150 (248)
T 2pnf_A           82 LVDGIDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQR-----WGRIVNISSVVGFTG------  150 (248)
T ss_dssp             HSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHT-----CEEEEEECCHHHHHC------
T ss_pred             hcCCCCEEEECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-----CcEEEEEccHHhcCC------
Confidence            999999999999976543  4567889999999999999999999999998765     479999999876655      


Q ss_pred             ccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHHH-HHHHHhhcCC
Q 019722          189 YLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLV-FFLTSKLLKT  267 (336)
Q Consensus       189 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~-~~~~~~~~~~  267 (336)
                                 .++...|+++|++++.+++.++.++.+.+  |++|+|+||++.|++............ ...+.....+
T Consensus       151 -----------~~~~~~Y~~sK~a~~~~~~~la~e~~~~~--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~  217 (248)
T 2pnf_A          151 -----------NVGQVNYSTTKAGLIGFTKSLAKELAPRN--VLVNAVAPGFIETDMTAVLSEEIKQKYKEQIPLGRFGS  217 (248)
T ss_dssp             -----------CTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCGGGGGSCHHHHHHHHHTCTTSSCBC
T ss_pred             -----------CCCCchHHHHHHHHHHHHHHHHHHhcccC--eEEEEEEeceecCchhhhccHHHHHHHHhcCCCCCccC
Confidence                       45667899999999999999999999877  999999999999998765432221111 1122234568


Q ss_pred             hHHHHHHHHHHHhcCccccCCceeeccCcc
Q 019722          268 IPQGAATTCYVAIHPRLVNVSGKYFADCNE  297 (336)
Q Consensus       268 ~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~  297 (336)
                      +++++..+++++. +...+++|+.+..+|+
T Consensus       218 ~~dva~~~~~l~~-~~~~~~~G~~~~v~gg  246 (248)
T 2pnf_A          218 PEEVANVVLFLCS-ELASYITGEVIHVNGG  246 (248)
T ss_dssp             HHHHHHHHHHHHS-GGGTTCCSCEEEESTT
T ss_pred             HHHHHHHHHHHhC-chhhcCCCcEEEeCCC
Confidence            9999999999987 5567889999988875

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=100.00  E-value=4.5e-38  Score=279.82  Aligned_cols=231  Identities=15%  Similarity=0.138  Sum_probs=190.8

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCCCc
Q 019722           36 VTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLPL  115 (336)
Q Consensus        36 k~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i  115 (336)
                      |++|||||++|||++++++|+++|++|++++|+.++++...+ ++..  +.++.++     |+++++++++++.+.++++
T Consensus         2 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-l~~~--~~~~~~~-----d~~~v~~~~~~~~~~~g~i   73 (254)
T 1zmt_A            2 STAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEA-FAET--YPQLKPM-----SEQEPAELIEAVTSAYGQV   73 (254)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHH-HHHH--CTTSEEC-----CCCSHHHHHHHHHHHHSCC
T ss_pred             eEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-HHhc--CCcEEEE-----CHHHHHHHHHHHHHHhCCC
Confidence            789999999999999999999999999999999887776654 5544  3455544     6678888899988888999


Q ss_pred             cEEEEcccCC-CC--CCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccccccc
Q 019722          116 NLLINNAGKF-AH--QHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQ  192 (336)
Q Consensus       116 d~lv~nAg~~-~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~~  192 (336)
                      |+||||||+. ..  ..+.+.++|++++++|+.+++.++++++|.|++++     .|+||++||..+..+          
T Consensus        74 D~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-----~g~iv~isS~~~~~~----------  138 (254)
T 1zmt_A           74 DVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRK-----SGHIIFITSATPFGP----------  138 (254)
T ss_dssp             CEEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-----CCEEEEECCSTTTSC----------
T ss_pred             CEEEECCCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-----CcEEEEECCcccccC----------
Confidence            9999999976 32  25678899999999999999999999999998765     589999999987765          


Q ss_pred             ccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCce---------eCCCCCccchhHHHHHHHHHHh
Q 019722          193 ISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIV---------RTRLTREREGFITDLVFFLTSK  263 (336)
Q Consensus       193 ~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v---------~T~~~~~~~~~~~~~~~~~~~~  263 (336)
                             .+....|++||++++.|+++++.|+++.|  |+||+|+||+|         +|++.+.............+..
T Consensus       139 -------~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~PG~v~~~~~~~~~~T~~~~~~~~~~~~~~~~~p~~  209 (254)
T 1zmt_A          139 -------WKELSTYTSARAGACTLANALSKELGEYN--IPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTALQ  209 (254)
T ss_dssp             -------CTTCHHHHHHHHHHHHHHHHHHHHHGGGT--CCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHHHSSSS
T ss_pred             -------CCCchHHHHHHHHHHHHHHHHHHHhhhcC--cEEEEEecCccccccccccCCCcccccChHHHHHHhccCCCC
Confidence                   56678999999999999999999999888  99999999999         7776554222222222222334


Q ss_pred             hcCChHHHHHHHHHHHhcCccccCCceeeccCcccc
Q 019722          264 LLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAW  299 (336)
Q Consensus       264 ~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  299 (336)
                      +..+|+|+|..++|+++ +...+++|+++.++|+..
T Consensus       210 ~~~~p~dvA~~v~~l~s-~~~~~~tG~~~~vdgG~~  244 (254)
T 1zmt_A          210 RLGTQKELGELVAFLAS-GSCDYLTGQVFWLAGGFP  244 (254)
T ss_dssp             SCBCHHHHHHHHHHHHT-TSCGGGTTCEEEESTTCC
T ss_pred             CCcCHHHHHHHHHHHhC-cccCCccCCEEEECCCch
Confidence            56789999999999987 667899999999998754

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=100.00  E-value=1e-38  Score=282.24  Aligned_cols=226  Identities=19%  Similarity=0.168  Sum_probs=189.2

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHH-CCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhc
Q 019722           33 LSSVTAIITGATSGIGAETARVLAK-RGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSL  111 (336)
Q Consensus        33 l~gk~~lItGgs~gIG~aia~~L~~-~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  111 (336)
                      .++|++|||||++|||++++++|++ .|++|++++|+.+.            ...++.++++|++++++++++++.+.  
T Consensus         2 ~~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~------------~~~~~~~~~~Dv~~~~~v~~~~~~~~--   67 (244)
T 4e4y_A            2 NAMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSF------------SAENLKFIKADLTKQQDITNVLDIIK--   67 (244)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCC------------CCTTEEEEECCTTCHHHHHHHHHHTT--
T ss_pred             CCCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEecccccc------------ccccceEEecCcCCHHHHHHHHHHHH--
Confidence            4689999999999999999999999 78899999987541            13468999999999999999995554  


Q ss_pred             CCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcccc
Q 019722          112 NLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRY  189 (336)
Q Consensus       112 ~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~  189 (336)
                      ++++|+||||||+....  .+.+.++|++++++|+.+++.++++++|.|+++       |+||++||..+..+       
T Consensus        68 ~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~-------g~iv~~sS~~~~~~-------  133 (244)
T 4e4y_A           68 NVSFDGIFLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVG-------ASIVFNGSDQCFIA-------  133 (244)
T ss_dssp             TCCEEEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEE-------EEEEEECCGGGTCC-------
T ss_pred             hCCCCEEEECCccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccC-------cEEEEECCHHHccC-------
Confidence            77999999999986543  677889999999999999999999999998652       69999999988766       


Q ss_pred             cccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchh------------HHHHH
Q 019722          190 LGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGF------------ITDLV  257 (336)
Q Consensus       190 ~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~------------~~~~~  257 (336)
                                .++...|++||++++.|+++++.|+++.|  |+||+|+||+|+|++.+.....            .....
T Consensus       134 ----------~~~~~~Y~asKaa~~~~~~~la~e~~~~g--i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~  201 (244)
T 4e4y_A          134 ----------KPNSFAYTLSKGAIAQMTKSLALDLAKYQ--IRVNTVCPGTVDTDLYRNLIQKYANNVGISFDEAQKQEE  201 (244)
T ss_dssp             ----------CTTBHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEESCBCCHHHHHHHHHHHHHHTCCHHHHHHHHH
T ss_pred             ----------CCCCchhHHHHHHHHHHHHHHHHHHHHcC--eEEEEEecCccCchhhHHHHHhhhhhcCCCHHHHHHHHh
Confidence                      67788999999999999999999999988  9999999999999987653221            11111


Q ss_pred             HHHHHhhcCChHHHHHHHHHHHhcCccccCCceeeccCcccc
Q 019722          258 FFLTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAW  299 (336)
Q Consensus       258 ~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  299 (336)
                      ...+..+..+|+|+|..++|+++ +...+++|+.+.++|+..
T Consensus       202 ~~~p~~r~~~p~dvA~~v~~l~s-~~~~~itG~~i~vdGG~~  242 (244)
T 4e4y_A          202 KEFPLNRIAQPQEIAELVIFLLS-DKSKFMTGGLIPIDGGYT  242 (244)
T ss_dssp             TTSTTSSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTGG
T ss_pred             hcCCCCCCcCHHHHHHHHHHHhc-CccccccCCeEeECCCcc
Confidence            12233456789999999999997 667899999999998754

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=100.00  E-value=2.7e-37  Score=273.74  Aligned_cols=241  Identities=24%  Similarity=0.230  Sum_probs=200.9

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHh
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHS  110 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  110 (336)
                      +++++|++|||||++|||++++++|+++|++|++++|+.+..++..+++..   ..++.++++|++++++++++++++.+
T Consensus         2 ~~~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~   78 (251)
T 1zk4_A            2 NRLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGT---PDQIQFFQHDSSDEDGWTKLFDATEK   78 (251)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC---TTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhc---cCceEEEECCCCCHHHHHHHHHHHHH
Confidence            468999999999999999999999999999999999999888777766643   25799999999999999999999999


Q ss_pred             cCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccc
Q 019722          111 LNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIR  188 (336)
Q Consensus       111 ~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~  188 (336)
                      .++++|+||||||+....  .+.+.++|++.+++|+.+++.++++++|.|++++.    +++||++||..+..+      
T Consensus        79 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~----~~~iv~isS~~~~~~------  148 (251)
T 1zk4_A           79 AFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGL----GASIINMSSIEGFVG------  148 (251)
T ss_dssp             HHSSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSS----CEEEEEECCGGGTSC------
T ss_pred             HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCC----CCEEEEeCCchhccC------
Confidence            899999999999976543  56788899999999999999999999999976531    279999999877655      


Q ss_pred             ccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHc--cCCCcEEEEEeeCCceeCCCCCccchhHHH--HHHHHHHhh
Q 019722          189 YLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLK--QMEANVTVNCVHPGIVRTRLTREREGFITD--LVFFLTSKL  264 (336)
Q Consensus       189 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~--~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~--~~~~~~~~~  264 (336)
                                 .+....|++||++++.++++++.|+.  +.|  |++|+|+||++.|++.+........  .....+...
T Consensus       149 -----------~~~~~~Y~~sK~a~~~~~~~~a~e~~~~~~~--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~  215 (251)
T 1zk4_A          149 -----------DPSLGAYNASKGAVRIMSKSAALDCALKDYD--VRVNTVHPGYIKTPLVDDLPGAEEAMSQRTKTPMGH  215 (251)
T ss_dssp             -----------CTTCHHHHHHHHHHHHHHHHHHHHHHHTTCS--EEEEEEEECCBCCHHHHTSTTHHHHHTSTTTCTTSS
T ss_pred             -----------CCCCccchHHHHHHHHHHHHHHHHhcccCCC--eEEEEEeeCcCcchhhhhcCchhhhHHHhhcCCCCC
Confidence                       56677899999999999999999988  656  9999999999999987654221110  000112234


Q ss_pred             cCChHHHHHHHHHHHhcCccccCCceeeccCccc
Q 019722          265 LKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEA  298 (336)
Q Consensus       265 ~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  298 (336)
                      ...|+|++..++++++ +...+++|+.+..+|+.
T Consensus       216 ~~~~~dva~~~~~l~~-~~~~~~~G~~~~v~gG~  248 (251)
T 1zk4_A          216 IGEPNDIAYICVYLAS-NESKFATGSEFVVDGGY  248 (251)
T ss_dssp             CBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTG
T ss_pred             CcCHHHHHHHHHHHcC-cccccccCcEEEECCCc
Confidence            5689999999999987 55678999999988874

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=100.00  E-value=1.9e-37  Score=276.77  Aligned_cols=247  Identities=23%  Similarity=0.269  Sum_probs=197.2

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhC-----CCCceEEEeccCCCHHHHHHHH
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDC-----PGSDIVVLPLDLSSLSSVRNFV  105 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~-----~~~~~~~~~~Dl~~~~~v~~~~  105 (336)
                      .+|++|++|||||++|||++++++|+++|++|++++|+.+..++..+++....     +..++.++++|+++++++++++
T Consensus         3 ~~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   82 (264)
T 2pd6_A            3 NRLRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLL   82 (264)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHHH
T ss_pred             cccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHHH
Confidence            45889999999999999999999999999999999999988877766554321     1157899999999999999999


Q ss_pred             HHHHhcCCCc-cEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccc
Q 019722          106 SQFHSLNLPL-NLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWF  182 (336)
Q Consensus       106 ~~~~~~~~~i-d~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~  182 (336)
                      +.+.+.++++ |+||||||.....  .+.+.++|++.+++|+.+++.+++++.|.|.+++.    .++||++||..+..+
T Consensus        83 ~~~~~~~g~i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~----~g~iv~isS~~~~~~  158 (264)
T 2pd6_A           83 EQVQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGC----RGSIINISSIVGKVG  158 (264)
T ss_dssp             HHHHHHHSSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC----CEEEEEECCTHHHHC
T ss_pred             HHHHHHhCCCCeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCC----CceEEEECChhhccC
Confidence            9999888998 9999999976543  46678899999999999999999999999987531    279999999887765


Q ss_pred             cCCcccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhH-HHHHHHHH
Q 019722          183 SGDMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFI-TDLVFFLT  261 (336)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~-~~~~~~~~  261 (336)
                                       .++...|++||++++.+++.++.++.+.|  |++|+|+||++.|++.+...... .......+
T Consensus       159 -----------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~  219 (264)
T 2pd6_A          159 -----------------NVGQTNYAASKAGVIGLTQTAARELGRHG--IRCNSVLPGFIATPMTQKVPQKVVDKITEMIP  219 (264)
T ss_dssp             -----------------CTTBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCSCC----------CTGGGCT
T ss_pred             -----------------CCCChhhHHHHHHHHHHHHHHHHHhhhcC--eEEEEEeeecccccchhhcCHHHHHHHHHhCC
Confidence                             56678899999999999999999999888  99999999999999876432111 00101112


Q ss_pred             HhhcCChHHHHHHHHHHHhcCccccCCceeeccCcccccc
Q 019722          262 SKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWTS  301 (336)
Q Consensus       262 ~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~~  301 (336)
                      .....+|+|+|..+++++. +...+++|+.+..+|+....
T Consensus       220 ~~~~~~~~dva~~~~~l~~-~~~~~~~G~~~~v~gg~~~~  258 (264)
T 2pd6_A          220 MGHLGDPEDVADVVAFLAS-EDSGYITGTSVEVTGGLFMA  258 (264)
T ss_dssp             TCSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTC---
T ss_pred             CCCCCCHHHHHHHHHHHcC-CcccCCCCCEEEECCCceec
Confidence            2345689999999999987 55678999999999886543

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=7.2e-37  Score=278.75  Aligned_cols=244  Identities=20%  Similarity=0.292  Sum_probs=202.3

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhC---CCCceEEEeccCCCHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDC---PGSDIVVLPLDLSSLSSVRNFVS  106 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~~~Dl~~~~~v~~~~~  106 (336)
                      ..+++||++|||||++|||++++++|+++|++|++++|+.+++++..++++...   .+.++.++++|++++++++++++
T Consensus        13 ~~~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~   92 (303)
T 1yxm_A           13 PGLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVK   92 (303)
T ss_dssp             TTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHH
T ss_pred             cCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHH
Confidence            557999999999999999999999999999999999999998888888876521   24689999999999999999999


Q ss_pred             HHHhcCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccC
Q 019722          107 QFHSLNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSG  184 (336)
Q Consensus       107 ~~~~~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~  184 (336)
                      ++.+.++++|+||||||.....  .+.+.++|++.+++|+.+++.++++++|.+.+..     .++||++||.. ..+  
T Consensus        93 ~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-----~~~iv~isS~~-~~~--  164 (303)
T 1yxm_A           93 STLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEH-----GGSIVNIIVPT-KAG--  164 (303)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHH-----CEEEEEECCCC-TTC--
T ss_pred             HHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhc-----CCeEEEEEeec-ccC--
Confidence            9999899999999999965432  4567889999999999999999999999765544     48999999987 433  


Q ss_pred             CcccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCC-Cccc----hhHHHHHHH
Q 019722          185 DMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLT-RERE----GFITDLVFF  259 (336)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~-~~~~----~~~~~~~~~  259 (336)
                                     .+....|+++|++++.+++.++.++.+.|  |+||+|+||++.|++. ....    .........
T Consensus       165 ---------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~  227 (303)
T 1yxm_A          165 ---------------FPLAVHSGAARAGVYNLTKSLALEWACSG--IRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQK  227 (303)
T ss_dssp             ---------------CTTCHHHHHHHHHHHHHHHHHHHHTGGGT--EEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGG
T ss_pred             ---------------CCcchhhHHHHHHHHHHHHHHHHHhcccC--eEEEEEecCCcccchhhhhccccchHHHHHHHhc
Confidence                           56677899999999999999999999877  9999999999999952 2211    111111111


Q ss_pred             HHHhhcCChHHHHHHHHHHHhcCccccCCceeeccCcccc
Q 019722          260 LTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAW  299 (336)
Q Consensus       260 ~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  299 (336)
                      .+..+...|+|+|..++++++ +...+++|+.+.++|+..
T Consensus       228 ~p~~~~~~~~dvA~~i~~l~~-~~~~~~~G~~~~v~gG~~  266 (303)
T 1yxm_A          228 IPAKRIGVPEEVSSVVCFLLS-PAASFITGQSVDVDGGRS  266 (303)
T ss_dssp             STTSSCBCTHHHHHHHHHHHS-GGGTTCCSCEEEESTTGG
T ss_pred             CcccCCCCHHHHHHHHHHHhC-cccccCCCcEEEECCCee
Confidence            223446789999999999986 666889999999998754

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=100.00  E-value=1.3e-36  Score=268.27  Aligned_cols=230  Identities=22%  Similarity=0.272  Sum_probs=199.8

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-------EEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHH
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGA-------RLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVS  106 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~-------~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~  106 (336)
                      ++|++|||||++|||++++++|+++|+       +|++++|+.+++++..++++..  +.++.++++|++++++++++++
T Consensus         1 ~~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~   78 (244)
T 2bd0_A            1 MKHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAE--GALTDTITADISDMADVRRLTT   78 (244)
T ss_dssp             -CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTT--TCEEEEEECCTTSHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHcc--CCeeeEEEecCCCHHHHHHHHH
Confidence            378999999999999999999999999       9999999998888887777654  5689999999999999999999


Q ss_pred             HHHhcCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccC
Q 019722          107 QFHSLNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSG  184 (336)
Q Consensus       107 ~~~~~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~  184 (336)
                      ++.+.++++|+||||||+....  .+.+.++|++.+++|+.+++.++++++|.|++++     .++||++||..+..+  
T Consensus        79 ~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-----~~~iv~isS~~~~~~--  151 (244)
T 2bd0_A           79 HIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQH-----SGHIFFITSVAATKA--  151 (244)
T ss_dssp             HHHHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-----CEEEEEECCGGGTSC--
T ss_pred             HHHHhCCCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-----CCEEEEEecchhcCC--
Confidence            9999999999999999976543  4567889999999999999999999999998765     489999999887655  


Q ss_pred             CcccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHHHHHHHHhh
Q 019722          185 DMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSKL  264 (336)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~  264 (336)
                                     .+....|++||++++.++++++.++.+.|  |+||+|+||++.|++........        ...
T Consensus       152 ---------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~--------~~~  206 (244)
T 2bd0_A          152 ---------------FRHSSIYCMSKFGQRGLVETMRLYARKCN--VRITDVQPGAVYTPMWGKVDDEM--------QAL  206 (244)
T ss_dssp             ---------------CTTCHHHHHHHHHHHHHHHHHHHHHTTTT--EEEEEEEECCBCSTTTCCCCSTT--------GGG
T ss_pred             ---------------CCCCchhHHHHHHHHHHHHHHHHHhhccC--cEEEEEECCCccchhhhhccccc--------ccc
Confidence                           56678899999999999999999999877  99999999999999977643211        235


Q ss_pred             cCChHHHHHHHHHHHhcCccccCCceeeccCccc
Q 019722          265 LKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEA  298 (336)
Q Consensus       265 ~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  298 (336)
                      ..+|+++|..+++++. +...+++|+.+..++..
T Consensus       207 ~~~~~dva~~~~~l~~-~~~~~~~g~~~~~~~~~  239 (244)
T 2bd0_A          207 MMMPEDIAAPVVQAYL-QPSRTVVEEIILRPTSG  239 (244)
T ss_dssp             SBCHHHHHHHHHHHHT-SCTTEEEEEEEEEETTC
T ss_pred             CCCHHHHHHHHHHHHh-CCccccchheEEecccc
Confidence            6799999999999998 55678889888776653

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=100.00  E-value=3.9e-39  Score=297.32  Aligned_cols=240  Identities=14%  Similarity=0.136  Sum_probs=193.8

Q ss_pred             CCCEEEEeCCCC--hHHHHHHHHHHHCCCEEEEeeCChHH---------HHHHHHHHHhhC-CCCceEEEeccCCCH--H
Q 019722           34 SSVTAIITGATS--GIGAETARVLAKRGARLVLPARSLKA---------AEEAKARLASDC-PGSDIVVLPLDLSSL--S   99 (336)
Q Consensus        34 ~gk~~lItGgs~--gIG~aia~~L~~~G~~V~~~~r~~~~---------~~~~~~~l~~~~-~~~~~~~~~~Dl~~~--~   99 (336)
                      .+|++|||||++  |||+++|++|+++|++|++++|++..         ++...+.+.... ....+.++++|+++.  +
T Consensus         1 ~~k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~   80 (329)
T 3lt0_A            1 NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAN   80 (329)
T ss_dssp             CCCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHHHTTTTTGGGBCSSSCBCCEEEEEECCTTCSSGG
T ss_pred             CCcEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCccccccccchHHHHHHHHHHHhhcccccccccccccccccchh
Confidence            479999999985  99999999999999999988877521         111111111100 123478899999988  7


Q ss_pred             ------------------HHHHHHHHHHhcCCCccEEEEcccCCC----CCCCCCchhhhhHHHHHHhHHHHHHHHHHHH
Q 019722          100 ------------------SVRNFVSQFHSLNLPLNLLINNAGKFA----HQHAISEDGIEMTFATNYLGHFLLTKLLLKK  157 (336)
Q Consensus       100 ------------------~v~~~~~~~~~~~~~id~lv~nAg~~~----~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~  157 (336)
                                        +++++++++.+.++++|+||||||+..    +..+.+.++|++++++|+.|++.++++++|.
T Consensus        81 ~~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~  160 (329)
T 3lt0_A           81 DIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNI  160 (329)
T ss_dssp             GCCHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGG
T ss_pred             hhhhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence                              999999999999999999999999742    2367889999999999999999999999999


Q ss_pred             HHHhhccCCCCCeEEEEcCCccccccCCcccccccccCCCCCCChhh-HhHHHHHHHHHHHHHHHHHHcc-CCCcEEEEE
Q 019722          158 MIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATR-AYALSKLANVLHTKELAQRLKQ-MEANVTVNC  235 (336)
Q Consensus       158 l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~Y~~sK~a~~~l~~~la~e~~~-~g~~I~vn~  235 (336)
                      |+++       |+||++||.++..+                 .+... .|++||+++.+|+++++.|+++ .|  |+||+
T Consensus       161 m~~~-------g~Iv~isS~~~~~~-----------------~~~~~~~Y~asKaal~~~~~~la~el~~~~g--I~vn~  214 (329)
T 3lt0_A          161 MKPQ-------SSIISLTYHASQKV-----------------VPGYGGGMSSAKAALESDTRVLAYHLGRNYN--IRINT  214 (329)
T ss_dssp             EEEE-------EEEEEEECGGGTSC-----------------CTTCTTTHHHHHHHHHHHHHHHHHHHHHHHC--CEEEE
T ss_pred             HhhC-------CeEEEEeCccccCC-----------------CCcchHHHHHHHHHHHHHHHHHHHHhCCccC--eEEEE
Confidence            9763       79999999988765                 55564 8999999999999999999998 78  99999


Q ss_pred             eeCCceeCCCCCccchh----------------------------------------------HHHHHHHHHHhhcCChH
Q 019722          236 VHPGIVRTRLTREREGF----------------------------------------------ITDLVFFLTSKLLKTIP  269 (336)
Q Consensus       236 v~PG~v~T~~~~~~~~~----------------------------------------------~~~~~~~~~~~~~~~~~  269 (336)
                      |+||+|+|+|.+.....                                              ........+..+..+|+
T Consensus       215 v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pe  294 (329)
T 3lt0_A          215 ISAGPLKSRAATAINKLNNTYENNTNQNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKYAPLRQKLLST  294 (329)
T ss_dssp             EEECCCCCHHHHTCC------------------------------------------CHHHHHHHHHHHHSSSCSCCCHH
T ss_pred             EecceeechhHhhhhhhcccccccccccccccccccchhhcccccchhhhhhhhcccchhHHHHHHHhhcCcccCcCCHH
Confidence            99999999987764210                                              11222233445678999


Q ss_pred             HHHHHHHHHHhcCccccCCceeeccCccccc
Q 019722          270 QGAATTCYVAIHPRLVNVSGKYFADCNEAWT  300 (336)
Q Consensus       270 ~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~  300 (336)
                      |+|..++||++ +.+.++||+.+.++|+...
T Consensus       295 evA~~v~fL~s-~~a~~itG~~i~vdGG~~~  324 (329)
T 3lt0_A          295 DIGSVASFLLS-RESRAITGQTIYVDNGLNI  324 (329)
T ss_dssp             HHHHHHHHHHS-GGGTTCCSCEEEESTTGGG
T ss_pred             HHHHHHHHHhC-chhccccCcEEEEcCCeeE
Confidence            99999999997 7889999999999998654

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=100.00  E-value=2.3e-37  Score=275.14  Aligned_cols=246  Identities=22%  Similarity=0.264  Sum_probs=202.0

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCC-hHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARS-LKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~-~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      ++++||++|||||++|||++++++|+++|++|++++|+ .+.+++..++++..  +.++.++++|++++++++++++++.
T Consensus         3 ~~l~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~   80 (258)
T 3afn_B            3 PDLKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRAD--GGDAAFFAADLATSEACQQLVDEFV   80 (258)
T ss_dssp             GGGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHT--TCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhc--CCceEEEECCCCCHHHHHHHHHHHH
Confidence            35889999999999999999999999999999999999 77777777777654  5689999999999999999999999


Q ss_pred             hcCCCccEEEEcccC-CCC--CCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCcccc-ccCC
Q 019722          110 SLNLPLNLLINNAGK-FAH--QHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSW-FSGD  185 (336)
Q Consensus       110 ~~~~~id~lv~nAg~-~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~-~~~~  185 (336)
                      +.++++|+||||||. ...  ..+.+.++|++++++|+.+++.++++++|.|.++....+..++||++||..+.. +   
T Consensus        81 ~~~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~---  157 (258)
T 3afn_B           81 AKFGGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTGG---  157 (258)
T ss_dssp             HHHSSCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTHHHHCC---
T ss_pred             HHcCCCCEEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchhhccCC---
Confidence            989999999999997 332  245677889999999999999999999999976531011237999999987765 3   


Q ss_pred             cccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchh-HHHHHHHHHHhh
Q 019722          186 MIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGF-ITDLVFFLTSKL  264 (336)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~-~~~~~~~~~~~~  264 (336)
                                    .++...|++||++++.+++.++.++++.|  |+||+|+||++.|++....... ........+...
T Consensus       158 --------------~~~~~~Y~~sK~a~~~~~~~~~~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~  221 (258)
T 3afn_B          158 --------------GPGAGLYGAAKAFLHNVHKNWVDFHTKDG--VRFNIVSPGTVDTAFHADKTQDVRDRISNGIPMGR  221 (258)
T ss_dssp             --------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBSSGGGTTCCHHHHHHHHTTCTTCS
T ss_pred             --------------CCCchHHHHHHHHHHHHHHHHHHhhcccC--eEEEEEeCCCcccccccccCHHHHHHHhccCCCCc
Confidence                          55677899999999999999999999887  9999999999999987654221 111111122234


Q ss_pred             cCChHHHHHHHHHHHhcCccc-cCCceeeccCccc
Q 019722          265 LKTIPQGAATTCYVAIHPRLV-NVSGKYFADCNEA  298 (336)
Q Consensus       265 ~~~~~~~a~~~~~l~~~~~~~-~~~G~~~~~~~~~  298 (336)
                      ...++|+|..+++++. +... +++|+.+..+|+.
T Consensus       222 ~~~~~dva~~~~~l~~-~~~~~~~~G~~~~v~gg~  255 (258)
T 3afn_B          222 FGTAEEMAPAFLFFAS-HLASGYITGQVLDINGGQ  255 (258)
T ss_dssp             CBCGGGTHHHHHHHHC-HHHHTTCCSEEEEESTTS
T ss_pred             CCCHHHHHHHHHHHhC-cchhccccCCEEeECCCc
Confidence            5689999999999987 4445 8899999888864

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=100.00  E-value=1e-36  Score=274.47  Aligned_cols=243  Identities=19%  Similarity=0.124  Sum_probs=201.4

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      .+++++|++|||||++|||++++++|+++|++|++++|+.+..++..+.+...  +.++.++++|++++++++++++++.
T Consensus        29 ~~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~  106 (279)
T 3ctm_A           29 LFSLKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTY--GVHSKAYKCNISDPKSVEETISQQE  106 (279)
T ss_dssp             GGCCTTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHH--CSCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcceEEEeecCCHHHHHHHHHHHH
Confidence            56799999999999999999999999999999999999987766666665544  4679999999999999999999998


Q ss_pred             hcCCCccEEEEcccCCCC-C--C-CCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCC
Q 019722          110 SLNLPLNLLINNAGKFAH-Q--H-AISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGD  185 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~~-~--~-~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~  185 (336)
                      +.++++|+||||||+... .  . +.+.++|++.+++|+.+++.+++.++|.|++++     .++||++||..+..+.. 
T Consensus       107 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-----~~~iv~isS~~~~~~~~-  180 (279)
T 3ctm_A          107 KDFGTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNG-----KGSLIITSSISGKIVNI-  180 (279)
T ss_dssp             HHHSCCSEEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-----CCEEEEECCCTTSCC---
T ss_pred             HHhCCCCEEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-----CCeEEEECchHhccCCC-
Confidence            888999999999997654 2  3 667789999999999999999999999998765     58999999987654310 


Q ss_pred             cccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhH-HHHHHHHHHhh
Q 019722          186 MIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFI-TDLVFFLTSKL  264 (336)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~-~~~~~~~~~~~  264 (336)
                                    .+....|++||++++.++++++.++++.  + +||+|+||++.|++........ .......+..+
T Consensus       181 --------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~--~-~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~p~~~  243 (279)
T 3ctm_A          181 --------------PQLQAPYNTAKAACTHLAKSLAIEWAPF--A-RVNTISPGYIDTDITDFASKDMKAKWWQLTPLGR  243 (279)
T ss_dssp             ---------------CCHHHHHHHHHHHHHHHHHHHHHTTTT--C-EEEEEEECSBSSTTTSSCCHHHHHHHHHHSTTCS
T ss_pred             --------------CCCcccHHHHHHHHHHHHHHHHHHhccc--C-CEEEEeccCCccccccccChHHHHHHHHhCCccC
Confidence                          3456789999999999999999999865  4 9999999999999986432221 11222223344


Q ss_pred             cCChHHHHHHHHHHHhcCccccCCceeeccCccc
Q 019722          265 LKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEA  298 (336)
Q Consensus       265 ~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  298 (336)
                      ..+|+|+|..++++++ +...+++|+.+.++|+.
T Consensus       244 ~~~~~dvA~~~~~l~s-~~~~~~tG~~i~vdgG~  276 (279)
T 3ctm_A          244 EGLTQELVGGYLYLAS-NASTFTTGSDVVIDGGY  276 (279)
T ss_dssp             CBCGGGTHHHHHHHHS-GGGTTCCSCEEEESTTC
T ss_pred             CcCHHHHHHHHHHHhC-ccccCccCCEEEECCCe
Confidence            6789999999999987 56788999999998874

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=1.8e-36  Score=271.40  Aligned_cols=237  Identities=24%  Similarity=0.228  Sum_probs=195.3

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcC
Q 019722           33 LSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLN  112 (336)
Q Consensus        33 l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  112 (336)
                      ++||++|||||++|||++++++|+++|++|++++|+.++.++..+++.....+.++.++++|++|+++++++++++.+.+
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   84 (267)
T 2gdz_A            5 VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHF   84 (267)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHHc
Confidence            68999999999999999999999999999999999998888777777654434579999999999999999999999989


Q ss_pred             CCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccccccc
Q 019722          113 LPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQ  192 (336)
Q Consensus       113 ~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~~  192 (336)
                      +++|+||||||+.      +.++|++.+++|+.+++.+++.++|.|++++.  ...++||++||..+..+          
T Consensus        85 g~id~lv~~Ag~~------~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~--~~~g~iv~isS~~~~~~----------  146 (267)
T 2gdz_A           85 GRLDILVNNAGVN------NEKNWEKTLQINLVSVISGTYLGLDYMSKQNG--GEGGIIINMSSLAGLMP----------  146 (267)
T ss_dssp             SCCCEEEECCCCC------CSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGT--CCCEEEEEECCGGGTSC----------
T ss_pred             CCCCEEEECCCCC------ChhhHHHHHhHHHHHHHHHHHHHHHHHHhccC--CCCCEEEEeCCccccCC----------
Confidence            9999999999975      35789999999999999999999999976521  11479999999887665          


Q ss_pred             ccCCCCCCChhhHhHHHHHHHHHHHHHH--HHHHccCCCcEEEEEeeCCceeCCCCCccchh---------HHHHHHHHH
Q 019722          193 ISRNKSHYDATRAYALSKLANVLHTKEL--AQRLKQMEANVTVNCVHPGIVRTRLTREREGF---------ITDLVFFLT  261 (336)
Q Consensus       193 ~~~~~~~~~~~~~Y~~sK~a~~~l~~~l--a~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~---------~~~~~~~~~  261 (336)
                             .+....|++||++++.+++++  +.++++.|  |+||+|+||++.|++.......         .........
T Consensus       147 -------~~~~~~Y~~sK~a~~~~~~~~ala~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (267)
T 2gdz_A          147 -------VAQQPVYCASKHGIVGFTRSAALAANLMNSG--VRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIK  217 (267)
T ss_dssp             -------CTTCHHHHHHHHHHHHHHHHHHHHHHHHTCC--EEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHHHHHHH
T ss_pred             -------CCCCchHHHHHHHHHHHHHHHHHHHHhccCC--cEEEEEecCcCcchhhhccccccccchhhhHHHHHHHHhc
Confidence                   556778999999999999995  68888877  9999999999999986543110         011111222


Q ss_pred             HhhcCChHHHHHHHHHHHhcCccccCCceeeccCcccc
Q 019722          262 SKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAW  299 (336)
Q Consensus       262 ~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  299 (336)
                      .....+|+|+|..++++++.+   .++|+.+.++++..
T Consensus       218 ~~~~~~~~dvA~~v~~l~s~~---~~~G~~~~v~gg~~  252 (267)
T 2gdz_A          218 YYGILDPPLIANGLITLIEDD---ALNGAIMKITTSKG  252 (267)
T ss_dssp             HHCCBCHHHHHHHHHHHHHCT---TCSSCEEEEETTTE
T ss_pred             cccCCCHHHHHHHHHHHhcCc---CCCCcEEEecCCCc
Confidence            233569999999999999843   38999998887643

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=2.3e-36  Score=272.39  Aligned_cols=243  Identities=25%  Similarity=0.264  Sum_probs=196.4

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      +.+++||++|||||++|||++++++|+++|++|++++|+.+++++..++++......++.++++|++++++++++++++.
T Consensus        27 m~~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  106 (279)
T 1xg5_A           27 MERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIR  106 (279)
T ss_dssp             CGGGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHH
Confidence            55689999999999999999999999999999999999999888888888765434678999999999999999999999


Q ss_pred             hcCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcc
Q 019722          110 SLNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMI  187 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~  187 (336)
                      +.++++|+||||||+....  .+.+.++|++.+++|+.+++.+++.++|.|++.+.   ..++||++||..+....+   
T Consensus       107 ~~~g~iD~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~---~~g~iv~isS~~~~~~~~---  180 (279)
T 1xg5_A          107 SQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNV---DDGHIININSMSGHRVLP---  180 (279)
T ss_dssp             HHHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTC---CSCEEEEECCGGGTSCCS---
T ss_pred             HhCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC---CCceEEEEcChhhcccCC---
Confidence            8889999999999976543  55678899999999999999999999999987531   127999999987652111   


Q ss_pred             cccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHc--cCCCcEEEEEeeCCceeCCCCCcc-chhHHHHHHHHHHhh
Q 019722          188 RYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLK--QMEANVTVNCVHPGIVRTRLTRER-EGFITDLVFFLTSKL  264 (336)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~--~~g~~I~vn~v~PG~v~T~~~~~~-~~~~~~~~~~~~~~~  264 (336)
                                  .+....|+++|++++.|++.++.|+.  ..+  |++|+|+||++.|++.... ..............+
T Consensus       181 ------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~  246 (279)
T 1xg5_A          181 ------------LSVTHFYSATKYAVTALTEGLRQELREAQTH--IRATCISPGVVETQFAFKLHDKDPEKAAATYEQMK  246 (279)
T ss_dssp             ------------CGGGHHHHHHHHHHHHHHHHHHHHHHHTTCC--CEEEEEEESCBCSSHHHHHTTTCHHHHHHHHC---
T ss_pred             ------------CCCCchhHHHHHHHHHHHHHHHHHHhhcCCC--eEEEEEecCcccchhhhhhcccChhHHhhhccccc
Confidence                        56677899999999999999999998  656  9999999999999984321 111111222223345


Q ss_pred             cCChHHHHHHHHHHHhcCccccCCceeec
Q 019722          265 LKTIPQGAATTCYVAIHPRLVNVSGKYFA  293 (336)
Q Consensus       265 ~~~~~~~a~~~~~l~~~~~~~~~~G~~~~  293 (336)
                      ..+++|+|..+++++..+ ..+.+|....
T Consensus       247 ~~~~~dvA~~i~~l~~~~-~~~~~g~i~i  274 (279)
T 1xg5_A          247 CLKPEDVAEAVIYVLSTP-AHIQIGDIQM  274 (279)
T ss_dssp             CBCHHHHHHHHHHHHHSC-TTEEEEEEEE
T ss_pred             CCCHHHHHHHHHHHhcCC-cceEeeeEEE
Confidence            678999999999999854 4556666543

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=100.00  E-value=1.1e-36  Score=268.89  Aligned_cols=237  Identities=24%  Similarity=0.286  Sum_probs=199.1

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEe-eCChHHHHHHHHHHHhhCCCCceEE-EeccCCCHHHHHHHHHHHHhcC
Q 019722           35 SVTAIITGATSGIGAETARVLAKRGARLVLP-ARSLKAAEEAKARLASDCPGSDIVV-LPLDLSSLSSVRNFVSQFHSLN  112 (336)
Q Consensus        35 gk~~lItGgs~gIG~aia~~L~~~G~~V~~~-~r~~~~~~~~~~~l~~~~~~~~~~~-~~~Dl~~~~~v~~~~~~~~~~~  112 (336)
                      +|++|||||++|||++++++|+++|++|+++ +|+.+++++..++++..  +.++.+ +.+|++++++++++++++.+.+
T Consensus         1 ~k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   78 (245)
T 2ph3_A            1 MRKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRR--GSPLVAVLGANLLEAEAATALVHQAAEVL   78 (245)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHT--TCSCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc--CCceEEEEeccCCCHHHHHHHHHHHHHhc
Confidence            5899999999999999999999999999998 89988888877777654  456666 9999999999999999999888


Q ss_pred             CCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccccc
Q 019722          113 LPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYL  190 (336)
Q Consensus       113 ~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~  190 (336)
                      +++|+||||||+....  .+.+.++|++.+++|+.+++.++++++|.|++++     .++||++||..+..+        
T Consensus        79 ~~~d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-----~~~iv~~sS~~~~~~--------  145 (245)
T 2ph3_A           79 GGLDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKAR-----FGRIVNITSVVGILG--------  145 (245)
T ss_dssp             TCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-----CEEEEEECCTHHHHC--------
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcC-----CCEEEEEeChhhccC--------
Confidence            9999999999976542  5667889999999999999999999999998765     489999999877665        


Q ss_pred             ccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhH-HHHHHHHHHhhcCChH
Q 019722          191 GQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFI-TDLVFFLTSKLLKTIP  269 (336)
Q Consensus       191 ~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~-~~~~~~~~~~~~~~~~  269 (336)
                               .+....|+++|++++.+++.++.++.+.|  |++|+|+||++.|++.+...... .......+......++
T Consensus       146 ---------~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  214 (245)
T 2ph3_A          146 ---------NPGQANYVASKAGLIGFTRAVAKEYAQRG--ITVNAVAPGFIETEMTERLPQEVKEAYLKQIPAGRFGRPE  214 (245)
T ss_dssp             ---------CSSBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCHHHHTSCHHHHHHHHHTCTTCSCBCHH
T ss_pred             ---------CCCCcchHHHHHHHHHHHHHHHHHHHHcC--eEEEEEEEEeecCcchhhcCHHHHHHHHhcCCCCCCcCHH
Confidence                     55677899999999999999999999887  99999999999999876543211 1111112223456899


Q ss_pred             HHHHHHHHHHhcCccccCCceeeccCccc
Q 019722          270 QGAATTCYVAIHPRLVNVSGKYFADCNEA  298 (336)
Q Consensus       270 ~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  298 (336)
                      |+|..+++++. +...+++|+.+..+|+.
T Consensus       215 dva~~~~~l~~-~~~~~~~G~~~~v~gg~  242 (245)
T 2ph3_A          215 EVAEAVAFLVS-EKAGYITGQTLCVDGGL  242 (245)
T ss_dssp             HHHHHHHHHTS-GGGTTCCSCEEEESTTC
T ss_pred             HHHHHHHHHhC-cccccccCCEEEECCCC
Confidence            99999999987 45578899999888864

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=100.00  E-value=1.3e-36  Score=274.18  Aligned_cols=224  Identities=22%  Similarity=0.250  Sum_probs=186.6

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHh
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHS  110 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  110 (336)
                      |++++|++|||||++|||++++++|+++|++|++++|+.+++++..+++     +.++.++++|++++++++++++++.+
T Consensus         1 M~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~~~~~~~~~~~   75 (281)
T 3m1a_A            1 MSESAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAY-----PDRAEAISLDVTDGERIDVVAADVLA   75 (281)
T ss_dssp             ---CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHC-----TTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc-----cCCceEEEeeCCCHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999999988777655443     45899999999999999999999999


Q ss_pred             cCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccc
Q 019722          111 LNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIR  188 (336)
Q Consensus       111 ~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~  188 (336)
                      .++++|+||||||+....  .+.+.++|++++++|+.|++.++++++|.|++++     .++||++||..+..+      
T Consensus        76 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-----~~~iv~~sS~~~~~~------  144 (281)
T 3m1a_A           76 RYGRVDVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRERG-----SGSVVNISSFGGQLS------  144 (281)
T ss_dssp             HHSCCSEEEECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-----CEEEEEECCGGGTCC------
T ss_pred             hCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-----CCEEEEEcCccccCC------
Confidence            999999999999976432  5678899999999999999999999999998875     589999999887765      


Q ss_pred             ccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccc--------hhHHHH----
Q 019722          189 YLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRERE--------GFITDL----  256 (336)
Q Consensus       189 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~--------~~~~~~----  256 (336)
                                 .++...|++||++++.++++++.++++.|  |+||+|+||++.|++.....        ......    
T Consensus       145 -----------~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~  211 (281)
T 3m1a_A          145 -----------FAGFSAYSATKAALEQLSEGLADEVAPFG--IKVLIVEPGAFRTNLFGKGAAYFSEENPAYAEKVGPTR  211 (281)
T ss_dssp             -----------CTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCBCCTTTCCCCEEECCBCTTTHHHHHHHH
T ss_pred             -----------CCCchHHHHHHHHHHHHHHHHHHHhhccC--cEEEEEecCccccccccccccccCCcchhhHHHhHHHH
Confidence                       66778999999999999999999999988  99999999999999865421        111111    


Q ss_pred             --HHHHHHhhcCChHHHHHHHHHHHhcCc
Q 019722          257 --VFFLTSKLLKTIPQGAATTCYVAIHPR  283 (336)
Q Consensus       257 --~~~~~~~~~~~~~~~a~~~~~l~~~~~  283 (336)
                        ....+......++|+|.++++++..+.
T Consensus       212 ~~~~~~~~~~~~~~~dva~a~~~~~~~~~  240 (281)
T 3m1a_A          212 QLVQGSDGSQPGDPAKAAAAIRLALDTEK  240 (281)
T ss_dssp             HHHHC-----CBCHHHHHHHHHHHHHSSS
T ss_pred             HHHhhccCCCCCCHHHHHHHHHHHHhCCC
Confidence              111223446789999999999998553

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=100.00  E-value=4.2e-36  Score=265.08  Aligned_cols=235  Identities=21%  Similarity=0.269  Sum_probs=192.4

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHh
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHS  110 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  110 (336)
                      ++++||++|||||++|||++++++|+++|++|++++|+.+++++..+++      ..+.++++|++++++++++++    
T Consensus         3 ~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~------~~~~~~~~D~~~~~~~~~~~~----   72 (244)
T 3d3w_A            3 LFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVREC------PGIEPVCVDLGDWEATERALG----   72 (244)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS------TTCEEEECCTTCHHHHHHHHT----
T ss_pred             cccCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc------CCCCEEEEeCCCHHHHHHHHH----
Confidence            5789999999999999999999999999999999999988776655432      145677999999999988876    


Q ss_pred             cCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccc
Q 019722          111 LNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIR  188 (336)
Q Consensus       111 ~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~  188 (336)
                      .++++|+||||||.....  .+.+.++|++.+++|+.+++.+++++.|.|.+++.    .++||++||..+..+      
T Consensus        73 ~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~----~~~iv~~sS~~~~~~------  142 (244)
T 3d3w_A           73 SVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGV----PGAIVNVSSQCSQRA------  142 (244)
T ss_dssp             TCCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC----CEEEEEECCGGGTSC------
T ss_pred             HcCCCCEEEECCccCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCC----CcEEEEeCchhhccC------
Confidence            467899999999976532  55678899999999999999999999999987531    379999999877654      


Q ss_pred             ccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCcc---chhHHHHHHHHHHhhc
Q 019722          189 YLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRER---EGFITDLVFFLTSKLL  265 (336)
Q Consensus       189 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~---~~~~~~~~~~~~~~~~  265 (336)
                                 .++...|++||++++.++++++.|+++.|  |+||+|+||++.|++....   ...........+....
T Consensus       143 -----------~~~~~~Y~~sK~a~~~~~~~la~e~~~~~--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~  209 (244)
T 3d3w_A          143 -----------VTNHSVYCSTKGALDMLTKVMALELGPHK--IRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRIPLGKF  209 (244)
T ss_dssp             -----------CTTBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCBTTTTHHHHSCSTTHHHHHHHTCTTCSC
T ss_pred             -----------CCCCchHHHHHHHHHHHHHHHHHHhcccC--eEEEEEEeccccccchhhhccChHHHHHHHhhCCCCCC
Confidence                       56678899999999999999999999887  9999999999999986532   1111222222233456


Q ss_pred             CChHHHHHHHHHHHhcCccccCCceeeccCcccc
Q 019722          266 KTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAW  299 (336)
Q Consensus       266 ~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  299 (336)
                      ..|+|+|..+++++. +...+++|+.+..+|+..
T Consensus       210 ~~~~dva~~~~~l~~-~~~~~~~G~~~~v~gG~~  242 (244)
T 3d3w_A          210 AEVEHVVNAILFLLS-DRSGMTTGSTLPVEGGFW  242 (244)
T ss_dssp             BCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTGG
T ss_pred             cCHHHHHHHHHHHcC-ccccCCCCCEEEECCCcc
Confidence            689999999999987 556788999998888743

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=100.00  E-value=5.7e-37  Score=293.63  Aligned_cols=241  Identities=24%  Similarity=0.245  Sum_probs=194.6

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      ...++||++|||||++|||+++++.|+++|++|++++|+... ++..+....    ..+.+++||++|.++++++++++.
T Consensus       208 ~~~l~gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~-~~l~~~~~~----~~~~~~~~Dvtd~~~v~~~~~~~~  282 (454)
T 3u0b_A          208 DKPLDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAA-EDLKRVADK----VGGTALTLDVTADDAVDKITAHVT  282 (454)
T ss_dssp             TSTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGGH-HHHHHHHHH----HTCEEEECCTTSTTHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCccH-HHHHHHHHH----cCCeEEEEecCCHHHHHHHHHHHH
Confidence            345799999999999999999999999999999999997532 222222222    245689999999999999999999


Q ss_pred             hcCCC-ccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCc
Q 019722          110 SLNLP-LNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDM  186 (336)
Q Consensus       110 ~~~~~-id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~  186 (336)
                      +.+++ ||+||||||+....  .+.+.++|++++++|+.+++++++++.|.|.+++     .++||++||.++..+    
T Consensus       283 ~~~g~~id~lV~nAGv~~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~-----~g~iV~iSS~a~~~g----  353 (454)
T 3u0b_A          283 EHHGGKVDILVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGE-----GGRVIGLSSMAGIAG----  353 (454)
T ss_dssp             HHSTTCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCT-----TCEEEEECCHHHHHC----
T ss_pred             HHcCCCceEEEECCcccCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcC-----CCEEEEEeChHhCCC----
Confidence            98876 99999999987654  6778999999999999999999999999987644     589999999988876    


Q ss_pred             ccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHHHHH-HHHhhc
Q 019722          187 IRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFF-LTSKLL  265 (336)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~-~~~~~~  265 (336)
                                   .+++..|+++|+++++|+++++.|+.+.|  |+||+|+||+++|+|.+............ .+..+.
T Consensus       354 -------------~~g~~~YaasKaal~~l~~~la~e~~~~g--I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~l~r~  418 (454)
T 3u0b_A          354 -------------NRGQTNYATTKAGMIGLAEALAPVLADKG--ITINAVAPGFIETKMTEAIPLATREVGRRLNSLFQG  418 (454)
T ss_dssp             -------------CTTCHHHHHHHHHHHHHHHHHHHHHHTTT--CEEEEEEECSBCC----------CHHHHHSBTTSSC
T ss_pred             -------------CCCCHHHHHHHHHHHHHHHHHHHHhhhcC--cEEEEEEcCcccChhhhhcchhhHHHHHhhccccCC
Confidence                         67788999999999999999999999888  99999999999999987653322222211 123345


Q ss_pred             CChHHHHHHHHHHHhcCccccCCceeeccCccccc
Q 019722          266 KTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWT  300 (336)
Q Consensus       266 ~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~  300 (336)
                      ..|+|++..++|+++ +.+.++||+.+.++|+...
T Consensus       419 g~pedvA~~v~fL~s-~~a~~itG~~i~vdGG~~l  452 (454)
T 3u0b_A          419 GQPVDVAELIAYFAS-PASNAVTGNTIRVCGQAML  452 (454)
T ss_dssp             BCHHHHHHHHHHHHC-GGGTTCCSCEEEESSSBSC
T ss_pred             CCHHHHHHHHHHHhC-CccCCCCCcEEEECCcccc
Confidence            689999999999997 7789999999999997543

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=100.00  E-value=1e-36  Score=301.29  Aligned_cols=249  Identities=21%  Similarity=0.229  Sum_probs=199.3

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHh
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHS  110 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  110 (336)
                      .+|+||++|||||++|||+++|++|+++|++|++.+|+.  +++..+++++.  +.++..+.+|++  ++++++++++.+
T Consensus       318 ~~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~--~~~~~~~i~~~--g~~~~~~~~Dv~--~~~~~~~~~~~~  391 (604)
T 2et6_A          318 VSLKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKD--ATKTVDEIKAA--GGEAWPDQHDVA--KDSEAIIKNVID  391 (604)
T ss_dssp             CCCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSC--CHHHHHHHHHT--TCEEEEECCCHH--HHHHHHHHHHHH
T ss_pred             cccCCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCcc--HHHHHHHHHhc--CCeEEEEEcChH--HHHHHHHHHHHH
Confidence            478999999999999999999999999999999998642  34455566543  457888888884  556788888888


Q ss_pred             cCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccc
Q 019722          111 LNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIR  188 (336)
Q Consensus       111 ~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~  188 (336)
                      .+|+||+||||||+....  .+.+.++|++++++|+.|+|.++|+++|+|++++     .|+||++||.++..+      
T Consensus       392 ~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~-----~G~IVnisS~ag~~~------  460 (604)
T 2et6_A          392 KYGTIDILVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQ-----FGRIINITSTSGIYG------  460 (604)
T ss_dssp             HHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-----CEEEEEECCHHHHSC------
T ss_pred             hcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-----CCEEEEECChhhccC------
Confidence            899999999999986532  6788999999999999999999999999998765     589999999988776      


Q ss_pred             ccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHHHHHHHHhhcCCh
Q 019722          189 YLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSKLLKTI  268 (336)
Q Consensus       189 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~  268 (336)
                                 .+++..|++||+++.+|+++|+.|+++.|  ||||+|+||. .|+|......   .   .  ......|
T Consensus       461 -----------~~~~~~Y~asKaal~~lt~~la~El~~~g--IrVn~v~PG~-~T~m~~~~~~---~---~--~~~~~~p  518 (604)
T 2et6_A          461 -----------NFGQANYSSSKAGILGLSKTMAIEGAKNN--IKVNIVAPHA-ETAMTLSIMR---E---Q--DKNLYHA  518 (604)
T ss_dssp             -----------CTTBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECC-CCCC-----------------CCSSCG
T ss_pred             -----------CCCChhHHHHHHHHHHHHHHHHHHhCccC--eEEEEEcCCC-CCccccccCc---h---h--hccCCCH
Confidence                       66778999999999999999999999988  9999999995 9998664211   0   0  1124589


Q ss_pred             HHHHHHHHHHHhcCccccCCceeeccCccccc------------ccCCCCHHHHHHHHHHHHHh
Q 019722          269 PQGAATTCYVAIHPRLVNVSGKYFADCNEAWT------------SKLGSNSNEASRLWAASELL  320 (336)
Q Consensus       269 ~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~------------~~~~~~~~~~~~~w~~~~~~  320 (336)
                      ++++..++||++ +.+. ++|+.+.++|+...            .....+.+.....|+.+.+.
T Consensus       519 e~vA~~v~~L~s-~~~~-itG~~~~vdGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  580 (604)
T 2et6_A          519 DQVAPLLVYLGT-DDVP-VTGETFEIGGGWIGNTRWQRAKGAVSHDEHTTVEFIKEHLNEITDF  580 (604)
T ss_dssp             GGTHHHHHHTTS-TTCC-CCSCEEEEETTEEEEEEEEECCCEECCSSSCCHHHHHHHHHHHTCC
T ss_pred             HHHHHHHHHHhC-CccC-CCCcEEEECCCeeEeeeeeccccccCCCCCCCHHHHHHHHHHHhcc
Confidence            999999999987 6666 99999999887321            11234667777778765443

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=100.00  E-value=1.8e-36  Score=276.49  Aligned_cols=242  Identities=25%  Similarity=0.316  Sum_probs=192.3

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCH-HHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSL-SSVRNFVSQF  108 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~-~~v~~~~~~~  108 (336)
                      +..+++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+.. +.++.++++|++++ ++++.+++.+
T Consensus         7 ~~~~~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~~v~~~~~~~   85 (311)
T 3o26_A            7 NTVTKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSN-HENVVFHQLDVTDPIATMSSLADFI   85 (311)
T ss_dssp             -----CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTT-CCSEEEEECCTTSCHHHHHHHHHHH
T ss_pred             CccCCCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-CCceEEEEccCCCcHHHHHHHHHHH
Confidence            345789999999999999999999999999999999999999999999887764 45899999999998 9999999999


Q ss_pred             HhcCCCccEEEEcccCCCC--------------------------------CCCCCchhhhhHHHHHHhHHHHHHHHHHH
Q 019722          109 HSLNLPLNLLINNAGKFAH--------------------------------QHAISEDGIEMTFATNYLGHFLLTKLLLK  156 (336)
Q Consensus       109 ~~~~~~id~lv~nAg~~~~--------------------------------~~~~~~~~~~~~~~vn~~~~~~l~~~~~~  156 (336)
                      .+.++++|+||||||+...                                ..+.+.+++++++++|+.|++.++++++|
T Consensus        86 ~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~  165 (311)
T 3o26_A           86 KTHFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIP  165 (311)
T ss_dssp             HHHHSSCCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             HHhCCCCCEEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhhhhhheeeeeehHHHHHHHhhH
Confidence            9999999999999998642                                13457788999999999999999999999


Q ss_pred             HHHHhhccCCCCCeEEEEcCCccccccCCccc--------------------------ccccccCCCCCCChhhHhHHHH
Q 019722          157 KMIETAKATGIQGRIVNVSSSIHSWFSGDMIR--------------------------YLGQISRNKSHYDATRAYALSK  210 (336)
Q Consensus       157 ~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~--------------------------~~~~~~~~~~~~~~~~~Y~~sK  210 (336)
                      .|++++     .++||++||.++..+......                          +...........+....|++||
T Consensus       166 ~l~~~~-----~~~IV~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK  240 (311)
T 3o26_A          166 LLQLSD-----SPRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSK  240 (311)
T ss_dssp             HHTTSS-----SCEEEEECCGGGSGGGCCCHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHTTCTTTTTCCSSCHHHHHHH
T ss_pred             hhccCC-----CCeEEEEecCCcccccccchhhhhhhccccccchhHHHHHHHHHHhhhhccccccccCcccchhhHHHH
Confidence            998764     589999999887664211100                          0000011111124567899999


Q ss_pred             HHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHHHHHHHHhhcCChHHHHHHHHHHHhcCccccCCce
Q 019722          211 LANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSKLLKTIPQGAATTCYVAIHPRLVNVSGK  290 (336)
Q Consensus       211 ~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~  290 (336)
                      ++++.|++.+++++.+    |+||+|+||+|.|+|.+...              ..++++++..+++++..+. ...+|.
T Consensus       241 ~a~~~~~~~la~e~~~----i~v~~v~PG~v~T~~~~~~~--------------~~~~~~~a~~~~~~~~~~~-~~~~g~  301 (311)
T 3o26_A          241 ACLNAYTRVLANKIPK----FQVNCVCPGLVKTEMNYGIG--------------NYTAEEGAEHVVRIALFPD-DGPSGF  301 (311)
T ss_dssp             HHHHHHHHHHHHHCTT----SEEEEECCCSBCSGGGTTCC--------------SBCHHHHHHHHHHHHTCCS-SCCCSC
T ss_pred             HHHHHHHHHHHhhcCC----ceEEEecCCceecCCcCCCC--------------CCCHHHHHHHHHHHHhCCC-CCCCce
Confidence            9999999999999853    99999999999999977632              2478999999999998665 445777


Q ss_pred             eeccCc
Q 019722          291 YFADCN  296 (336)
Q Consensus       291 ~~~~~~  296 (336)
                      +|..+.
T Consensus       302 ~~~~s~  307 (311)
T 3o26_A          302 FYDCSE  307 (311)
T ss_dssp             EETC--
T ss_pred             Eecccc
Confidence            775443

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=100.00  E-value=5.2e-37  Score=272.79  Aligned_cols=235  Identities=25%  Similarity=0.271  Sum_probs=190.3

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCE-EEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCH-HHHHHHHHHH
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGAR-LVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSL-SSVRNFVSQF  108 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~~-V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~-~~v~~~~~~~  108 (336)
                      |+|+||++|||||++|||++++++|+++|++ |++++|+...  +..+++.+..++.++.++++|++++ ++++++++++
T Consensus         1 m~l~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~--~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   78 (254)
T 1sby_A            1 MDLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENP--TALAELKAINPKVNITFHTYDVTVPVAESKKLLKKI   78 (254)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCH--HHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHH
T ss_pred             CCCCCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchH--HHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHH
Confidence            4689999999999999999999999999996 9999998642  2334444444456899999999998 9999999999


Q ss_pred             HhcCCCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccc
Q 019722          109 HSLNLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIR  188 (336)
Q Consensus       109 ~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~  188 (336)
                      .+.++++|+||||||+.      +.++|++.+++|+.+++.++++++|.|.+++.  ...|+||++||.++..+      
T Consensus        79 ~~~~g~id~lv~~Ag~~------~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~--~~~g~iv~isS~~~~~~------  144 (254)
T 1sby_A           79 FDQLKTVDILINGAGIL------DDHQIERTIAINFTGLVNTTTAILDFWDKRKG--GPGGIIANICSVTGFNA------  144 (254)
T ss_dssp             HHHHSCCCEEEECCCCC------CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGT--CCCEEEEEECCGGGTSC------
T ss_pred             HHhcCCCCEEEECCccC------CHHHHhhhheeeehhHHHHHHHHHHHHHHhcC--CCCCEEEEECchhhccC------
Confidence            99899999999999974      46789999999999999999999999976531  11379999999887655      


Q ss_pred             ccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchh---HHHHHHHHHHhhc
Q 019722          189 YLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGF---ITDLVFFLTSKLL  265 (336)
Q Consensus       189 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~---~~~~~~~~~~~~~  265 (336)
                                 .+....|++||++++.++++++.++.+.|  |+||+|+||+++|++.+.....   .............
T Consensus       145 -----------~~~~~~Y~~sK~a~~~~~~~la~~~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~  211 (254)
T 1sby_A          145 -----------IHQVPVYSASKAAVVSFTNSLAKLAPITG--VTAYSINPGITRTPLVHTFNSWLDVEPRVAELLLSHPT  211 (254)
T ss_dssp             -----------CTTSHHHHHHHHHHHHHHHHHHHHHHHHS--EEEEEEEECSEESHHHHSCCCGGGSCTTHHHHHTTSCC
T ss_pred             -----------CCCchHHHHHHHHHHHHHHHHHHHhccCC--eEEEEEecCCccCccccccchhhhhhHHHHHHHhcCCC
Confidence                       56677899999999999999999998777  9999999999999986543211   0111111122234


Q ss_pred             CChHHHHHHHHHHHhcCccccCCceeeccCccc
Q 019722          266 KTIPQGAATTCYVAIHPRLVNVSGKYFADCNEA  298 (336)
Q Consensus       266 ~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  298 (336)
                      .+|+++|..+++++.    .+.+|+.+.++|+.
T Consensus       212 ~~~~dvA~~i~~~~~----~~~~G~~~~v~gG~  240 (254)
T 1sby_A          212 QTSEQCGQNFVKAIE----ANKNGAIWKLDLGT  240 (254)
T ss_dssp             EEHHHHHHHHHHHHH----HCCTTCEEEEETTE
T ss_pred             CCHHHHHHHHHHHHH----cCCCCCEEEEeCCc
Confidence            579999999999885    46799999888863

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=100.00  E-value=1.3e-36  Score=300.50  Aligned_cols=227  Identities=22%  Similarity=0.246  Sum_probs=191.6

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCCh---------HHHHHHHHHHHhhCCCCceEEEeccCCCHHHH
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSL---------KAAEEAKARLASDCPGSDIVVLPLDLSSLSSV  101 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~---------~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v  101 (336)
                      ++|+||++|||||++|||+++|++|+++|++|++.+|+.         +.+++..+++++.  +.++   .+|++|.+++
T Consensus         4 ~~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~--g~~~---~~d~~d~~~~   78 (604)
T 2et6_A            4 VDFKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKN--GGVA---VADYNNVLDG   78 (604)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHT--TCEE---EEECCCTTCH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhc--CCeE---EEEcCCHHHH
Confidence            568999999999999999999999999999999998765         5667777777654  3333   3588888889


Q ss_pred             HHHHHHHHhcCCCccEEEEcccCCCC--CCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCcc
Q 019722          102 RNFVSQFHSLNLPLNLLINNAGKFAH--QHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIH  179 (336)
Q Consensus       102 ~~~~~~~~~~~~~id~lv~nAg~~~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~  179 (336)
                      +++++++.+.+|+||+||||||+...  ..+.+.++|++++++|+.|+|.++|+++|+|++++     .|+|||+||.++
T Consensus        79 ~~~v~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~-----~G~IVnisS~ag  153 (604)
T 2et6_A           79 DKIVETAVKNFGTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQK-----YGRIVNTSSPAG  153 (604)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-----CEEEEEECCHHH
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-----CCEEEEECCHHH
Confidence            99999999999999999999997643  26788999999999999999999999999998875     589999999988


Q ss_pred             ccccCCcccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHHHHH
Q 019722          180 SWFSGDMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFF  259 (336)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~  259 (336)
                      ..+                 .++...|++||+++.+|+++++.|+++.|  ||||+|+|| +.|+|......  +.    
T Consensus       154 ~~~-----------------~~~~~~Y~asKaal~~lt~~la~El~~~g--IrVn~v~Pg-~~T~m~~~~~~--~~----  207 (604)
T 2et6_A          154 LYG-----------------NFGQANYASAKSALLGFAETLAKEGAKYN--IKANAIAPL-ARSRMTESIMP--PP----  207 (604)
T ss_dssp             HHC-----------------CTTBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEEC-CCCHHHHTTSC--HH----
T ss_pred             cCC-----------------CCCchHHHHHHHHHHHHHHHHHHHhCccC--eEEEEEccC-CcCccccccCC--hh----
Confidence            776                 66778999999999999999999999988  999999998 68887543211  10    


Q ss_pred             HHHhhcCChHHHHHHHHHHHhcCccccCCceeeccCcc
Q 019722          260 LTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNE  297 (336)
Q Consensus       260 ~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~  297 (336)
                        ......|++++..++|+++ +. .+++|+.+.++|+
T Consensus       208 --~~~~~~pe~vA~~v~~L~s-~~-~~itG~~~~vdgG  241 (604)
T 2et6_A          208 --MLEKLGPEKVAPLVLYLSS-AE-NELTGQFFEVAAG  241 (604)
T ss_dssp             --HHTTCSHHHHHHHHHHHTS-SS-CCCCSCEEEEETT
T ss_pred             --hhccCCHHHHHHHHHHHhC-Cc-ccCCCCEEEECCC
Confidence              1123589999999999997 55 8899999998886

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=100.00  E-value=2.6e-37  Score=269.58  Aligned_cols=214  Identities=21%  Similarity=0.213  Sum_probs=180.2

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      |+++++|++|||||++|||++++++|+++|++|++++|+.+                      +|++|+++++++++++ 
T Consensus         1 M~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~----------------------~D~~~~~~v~~~~~~~-   57 (223)
T 3uce_A            1 MMGSDKTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTG----------------------LDISDEKSVYHYFETI-   57 (223)
T ss_dssp             ----CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGT----------------------CCTTCHHHHHHHHHHH-
T ss_pred             CCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcc----------------------cCCCCHHHHHHHHHHh-
Confidence            46789999999999999999999999999999999999854                      8999999999999865 


Q ss_pred             hcCCCccEEEEcccCCCC---CCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCc
Q 019722          110 SLNLPLNLLINNAGKFAH---QHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDM  186 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~~---~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~  186 (336)
                         +++|+||||||+...   ..+.+.++|++.+++|+.+++.++++++|.|++       .|+||++||..+..+    
T Consensus        58 ---g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~-------~g~iv~~sS~~~~~~----  123 (223)
T 3uce_A           58 ---GAFDHLIVTAGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQ-------GGSITLTSGMLSRKV----  123 (223)
T ss_dssp             ---CSEEEEEECCCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEE-------EEEEEEECCGGGTSC----
T ss_pred             ---CCCCEEEECCCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccC-------CeEEEEecchhhccC----
Confidence               789999999997632   267788999999999999999999999999865       379999999887765    


Q ss_pred             ccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHH-----HHHHHHH
Q 019722          187 IRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFIT-----DLVFFLT  261 (336)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~-----~~~~~~~  261 (336)
                                   .++...|+++|++++.|+++++.|+++    ||||+|+||+++|++.+.......     ......+
T Consensus       124 -------------~~~~~~Y~asK~a~~~~~~~la~e~~~----i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~  186 (223)
T 3uce_A          124 -------------VANTYVKAAINAAIEATTKVLAKELAP----IRVNAISPGLTKTEAYKGMNADDRDAMYQRTQSHLP  186 (223)
T ss_dssp             -------------CTTCHHHHHHHHHHHHHHHHHHHHHTT----SEEEEEEECSBCSGGGTTSCHHHHHHHHHHHHHHST
T ss_pred             -------------CCCchHHHHHHHHHHHHHHHHHHhhcC----cEEEEEEeCCCcchhhhhcchhhHHHHHHHHhhcCC
Confidence                         667789999999999999999999985    999999999999999877643211     1222334


Q ss_pred             HhhcCChHHHHHHHHHHHhcCccccCCceeeccCccccc
Q 019722          262 SKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWT  300 (336)
Q Consensus       262 ~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~  300 (336)
                      ..+..+|+|+|.++++++.   ..+++|+.+.++|+...
T Consensus       187 ~~~~~~~~dvA~~~~~l~~---~~~~tG~~i~vdgG~~~  222 (223)
T 3uce_A          187 VGKVGEASDIAMAYLFAIQ---NSYMTGTVIDVDGGALL  222 (223)
T ss_dssp             TCSCBCHHHHHHHHHHHHH---CTTCCSCEEEESTTGGG
T ss_pred             CCCccCHHHHHHHHHHHcc---CCCCCCcEEEecCCeec
Confidence            4456789999999999997   36889999999987543

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=100.00  E-value=8.9e-36  Score=261.47  Aligned_cols=224  Identities=25%  Similarity=0.244  Sum_probs=181.4

Q ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhc
Q 019722           32 NLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSL  111 (336)
Q Consensus        32 ~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  111 (336)
                      +..+|++|||||++|||++++++|+++|++|++++|+.+++++..+++      .++.++++|++++++++++++++.+.
T Consensus         2 ~~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~------~~~~~~~~D~~~~~~~~~~~~~~~~~   75 (234)
T 2ehd_A            2 EGMKGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAEL------EGALPLPGDVREEGDWARAVAAMEEA   75 (234)
T ss_dssp             --CCCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS------TTCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh------hhceEEEecCCCHHHHHHHHHHHHHH
Confidence            345799999999999999999999999999999999988776655443      26889999999999999999999988


Q ss_pred             CCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcccc
Q 019722          112 NLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRY  189 (336)
Q Consensus       112 ~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~  189 (336)
                      ++++|+||||||+....  .+.+.++|++.+++|+.+++.+++.++|.|++++     .++||++||..+..+       
T Consensus        76 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-----~~~iv~isS~~~~~~-------  143 (234)
T 2ehd_A           76 FGELSALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRG-----GGTIVNVGSLAGKNP-------  143 (234)
T ss_dssp             HSCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTT-----CEEEEEECCTTTTSC-------
T ss_pred             cCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-----CcEEEEECCchhcCC-------
Confidence            89999999999976532  5667889999999999999999999999998764     489999999877654       


Q ss_pred             cccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHHHHHHHHhhcCChH
Q 019722          190 LGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSKLLKTIP  269 (336)
Q Consensus       190 ~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~  269 (336)
                                .++...|+++|++++.++++++.++.+.|  |++|+|+||++.|++......   .    .   ...+|+
T Consensus       144 ----------~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~---~----~---~~~~~~  201 (234)
T 2ehd_A          144 ----------FKGGAAYNASKFGLLGLAGAAMLDLREAN--VRVVNVLPGSVDTGFAGNTPG---Q----A---WKLKPE  201 (234)
T ss_dssp             ----------CTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEECC--------------------------CCHH
T ss_pred             ----------CCCCchhhHHHHHHHHHHHHHHHHHhhcC--cEEEEEEeCCCcCCccccccc---c----c---CCCCHH
Confidence                      56677899999999999999999999888  999999999999998764211   0    0   136899


Q ss_pred             HHHHHHHHHHhcCccccCCceeeccCc
Q 019722          270 QGAATTCYVAIHPRLVNVSGKYFADCN  296 (336)
Q Consensus       270 ~~a~~~~~l~~~~~~~~~~G~~~~~~~  296 (336)
                      |+|..+++++. +...+++|+.+...+
T Consensus       202 dvA~~~~~l~~-~~~~~~~g~~~~~~~  227 (234)
T 2ehd_A          202 DVAQAVLFALE-MPGHAMVSEIELRPT  227 (234)
T ss_dssp             HHHHHHHHHHH-SCCSSCCCEEECCC-
T ss_pred             HHHHHHHHHhC-CCcccccceEEEeec
Confidence            99999999998 556788998775554

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=100.00  E-value=2.5e-36  Score=279.54  Aligned_cols=255  Identities=11%  Similarity=-0.020  Sum_probs=199.8

Q ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHH-CCCEEEEeeCChHHHH------------HHHHHHHhhCCCCceEEEeccCCCH
Q 019722           32 NLSSVTAIITGATSGIGAETARVLAK-RGARLVLPARSLKAAE------------EAKARLASDCPGSDIVVLPLDLSSL   98 (336)
Q Consensus        32 ~l~gk~~lItGgs~gIG~aia~~L~~-~G~~V~~~~r~~~~~~------------~~~~~l~~~~~~~~~~~~~~Dl~~~   98 (336)
                      .-.||++|||||++|||+++++.|++ +|++|++++|+.+..+            ...+.+++.  +.++..+.+|++++
T Consensus        44 ~~~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~--G~~a~~i~~Dvtd~  121 (405)
T 3zu3_A           44 ANGPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQK--GLYAKSINGDAFSD  121 (405)
T ss_dssp             TTCCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHT--TCCEEEEESCTTSH
T ss_pred             CCCCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhc--CCceEEEECCCCCH
Confidence            35689999999999999999999999 9999999998754321            122233333  56899999999999


Q ss_pred             HHHHHHHHHHHhcCCCccEEEEcccCCC---------------CC---------------------CCCCchhhhhHHHH
Q 019722           99 SSVRNFVSQFHSLNLPLNLLINNAGKFA---------------HQ---------------------HAISEDGIEMTFAT  142 (336)
Q Consensus        99 ~~v~~~~~~~~~~~~~id~lv~nAg~~~---------------~~---------------------~~~~~~~~~~~~~v  142 (336)
                      ++++++++++.+.+|++|+||||||+..               +.                     .+.+.++|++++++
T Consensus       122 ~~v~~~v~~i~~~~G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~~~~~i~~~t~ee~~~~v~V  201 (405)
T 3zu3_A          122 EIKQLTIDAIKQDLGQVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVIKESVLQPATQSEIDSTVAV  201 (405)
T ss_dssp             HHHHHHHHHHHHHTSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcCCCCEEEEcCccccccCccccccccccccccccccccccccccccccccccCCCCCHHHHHHHHHh
Confidence            9999999999999999999999999741               11                     45688999999999


Q ss_pred             HHhHHH-HHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcccccccccCCCCCCChh--hHhHHHHHHHHHHHHH
Q 019722          143 NYLGHF-LLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDAT--RAYALSKLANVLHTKE  219 (336)
Q Consensus       143 n~~~~~-~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~Y~~sK~a~~~l~~~  219 (336)
                      |..+.+ .+++++.+.+..++     +|+||++||.++..+                 .+.+  ..|++||+++++|+|+
T Consensus       202 n~~~~~~~~~~~~~~~~m~~~-----gG~IVniSSi~~~~~-----------------~p~~~~~aY~AaKaal~~ltrs  259 (405)
T 3zu3_A          202 MGGEDWQMWIDALLDAGVLAE-----GAQTTAFTYLGEKIT-----------------HDIYWNGSIGAAKKDLDQKVLA  259 (405)
T ss_dssp             HSSHHHHHHHHHHHHHTCEEE-----EEEEEEEECCCCGGG-----------------TTTTTTSHHHHHHHHHHHHHHH
T ss_pred             hchhHHHHHHHHHHHHhhhhC-----CcEEEEEeCchhhCc-----------------CCCccchHHHHHHHHHHHHHHH
Confidence            999998 78888776432222     489999999988776                 5555  7899999999999999


Q ss_pred             HHHHHccC-CCcEEEEEeeCCceeCCCCCccchh-HHHHHHHHHHhhcCChHHHHHHHHHHHhcCccccCCceeeccCcc
Q 019722          220 LAQRLKQM-EANVTVNCVHPGIVRTRLTREREGF-ITDLVFFLTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNE  297 (336)
Q Consensus       220 la~e~~~~-g~~I~vn~v~PG~v~T~~~~~~~~~-~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~  297 (336)
                      |+.|+++. |  ||||+|+||.+.|++....+.. ........+.++.+.+|+++..++||++    .+++|.....|+.
T Consensus       260 LA~Ela~~~G--IRVNaVaPG~i~T~~s~~ip~~p~y~~~l~~~mkr~G~~Ed~a~~i~~L~s----d~l~~~~~~~D~~  333 (405)
T 3zu3_A          260 IRESLAAHGG--GDARVSVLKAVVSQASSAIPMMPLYLSLLFKVMKEKGTHEGCIEQVYSLYK----DSLCGDSPHMDQE  333 (405)
T ss_dssp             HHHHHHTTTS--CEEEEEECCCCCCHHHHTSTTHHHHHHHHHHHHHHHTCCCCHHHHHHHHHH----HTTSSSCCCBCTT
T ss_pred             HHHHhCcccC--eEEEEEEeCCCcCchhhcCCCCcHHHHHHHHHHhcCCCcHHHHHHHHHHHh----ccccCCCCCcCCC
Confidence            99999998 8  9999999999999998776432 1112223357788999999999999998    3678877766666


Q ss_pred             cccccC--CCCHHHH---HHHHHH
Q 019722          298 AWTSKL--GSNSNEA---SRLWAA  316 (336)
Q Consensus       298 ~~~~~~--~~~~~~~---~~~w~~  316 (336)
                      .....+  -.+++.+   +++|++
T Consensus       334 ~~~r~d~~e~~~~~q~~~~~~~~~  357 (405)
T 3zu3_A          334 GRLRADYKELDPEVQNQVQQLWDQ  357 (405)
T ss_dssp             SCEECCHHHHCHHHHHHHHHHHHH
T ss_pred             cCCCCchhhcCHHHHHHHHHHHHH
Confidence            444432  2234443   556654

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=100.00  E-value=5.7e-38  Score=287.79  Aligned_cols=244  Identities=19%  Similarity=0.118  Sum_probs=187.1

Q ss_pred             CCCCCCCEEEEeCC--CChHHHHHHHHHHHCCCEEEEeeCChHH------H-HHHHHHHHhhCCCC---ceEEEecc---
Q 019722           30 CPNLSSVTAIITGA--TSGIGAETARVLAKRGARLVLPARSLKA------A-EEAKARLASDCPGS---DIVVLPLD---   94 (336)
Q Consensus        30 ~~~l~gk~~lItGg--s~gIG~aia~~L~~~G~~V~~~~r~~~~------~-~~~~~~l~~~~~~~---~~~~~~~D---   94 (336)
                      .++|+||++|||||  ++|||++++++|+++|++|++++|++..      . ....++++....+.   .+.++.+|   
T Consensus         4 ~~~l~gk~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~   83 (315)
T 2o2s_A            4 PIDLRGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDEDRKLPDGSLIEFAGVYPLDAAF   83 (315)
T ss_dssp             CCCCTTCEEEEECCSSSSSHHHHHHHHHHTTTCEEEEEECHHHHHHHHHHHHHTTTHHHHBCTTSCBCCCSCEEECCTTC
T ss_pred             cccCCCCEEEEeCCCCCCChHHHHHHHHHHCCCEEEEEecccccchhhhhhhhhhhhhhhhhhccccccccccccccccc
Confidence            35689999999999  8999999999999999999999987521      1 11111222111111   12344443   


Q ss_pred             ---------CC--------CHHHHHHHHHHHHhcCCCccEEEEcccCCC----CCCCCCchhhhhHHHHHHhHHHHHHHH
Q 019722           95 ---------LS--------SLSSVRNFVSQFHSLNLPLNLLINNAGKFA----HQHAISEDGIEMTFATNYLGHFLLTKL  153 (336)
Q Consensus        95 ---------l~--------~~~~v~~~~~~~~~~~~~id~lv~nAg~~~----~~~~~~~~~~~~~~~vn~~~~~~l~~~  153 (336)
                               ++        ++++++++++++.+.++++|+||||||+..    +..+.+.++|++++++|+.+++.++++
T Consensus        84 ~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~  163 (315)
T 2o2s_A           84 DKPEDVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVSLLQH  163 (315)
T ss_dssp             SSTTSSCHHHHTCGGGSSCCCCSHHHHHHHHHHHHCSEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHH
T ss_pred             cccchhhhhhhcccccccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHHHHHHH
Confidence                     33        256899999999998999999999999753    225678899999999999999999999


Q ss_pred             HHHHHHHhhccCCCCCeEEEEcCCccccccCCcccccccccCCCCCCChh-hHhHHHHHHHHHHHHHHHHHHcc-CCCcE
Q 019722          154 LLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDAT-RAYALSKLANVLHTKELAQRLKQ-MEANV  231 (336)
Q Consensus       154 ~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Y~~sK~a~~~l~~~la~e~~~-~g~~I  231 (336)
                      ++|.|++       +|+||++||.++..+                 .++. ..|++||++++.|+++++.|+++ .|  |
T Consensus       164 ~~~~m~~-------~g~Iv~isS~~~~~~-----------------~~~~~~~Y~asKaal~~l~~~la~el~~~~g--I  217 (315)
T 2o2s_A          164 FGPIMNE-------GGSAVTLSYLAAERV-----------------VPGYGGGMSSAKAALESDTRTLAWEAGQKYG--V  217 (315)
T ss_dssp             HSTTEEE-------EEEEEEEEEGGGTSC-----------------CTTCCTTHHHHHHHHHHHHHHHHHHHHHHTC--C
T ss_pred             HHHHHhc-------CCEEEEEeccccccc-----------------CCCccHHHHHHHHHHHHHHHHHHHHhCcccC--e
Confidence            9999954       279999999887654                 4444 47999999999999999999985 77  9


Q ss_pred             EEEEeeCCceeCCCCCccc-----hhHHHH----HHHHHHhhcCChHHHHHHHHHHHhcCccccCCceeeccCccccc
Q 019722          232 TVNCVHPGIVRTRLTRERE-----GFITDL----VFFLTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWT  300 (336)
Q Consensus       232 ~vn~v~PG~v~T~~~~~~~-----~~~~~~----~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~  300 (336)
                      +||+|+||+|+|++.+...     .+....    ....+..+..+|+|+|..++|+++ +.+.+++|+++.++|+...
T Consensus       218 rvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s-~~~~~itG~~i~vdGG~~~  294 (315)
T 2o2s_A          218 RVNAISAGPLKSRAASAIGKSGEKSFIDYAIDYSYNNAPLRRDLHSDDVGGAALFLLS-PLARAVSGVTLYVDNGLHA  294 (315)
T ss_dssp             EEEEEEECCCCCHHHHHTTCSSSSCHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHHTS-GGGTTCCSCEEEESTTGGG
T ss_pred             EEEEEecccccchhhhhccccccchhHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhC-chhccCcCCEEEECCCeee
Confidence            9999999999999865421     111111    112233456799999999999987 7789999999999998544

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=100.00  E-value=2.8e-36  Score=267.46  Aligned_cols=228  Identities=19%  Similarity=0.234  Sum_probs=184.9

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      ..+++||++|||||++|||++++++|+++|++|++++|+.+..+    ++     + ++.++ +|+  .++++.+++++.
T Consensus        14 ~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~----~~-----~-~~~~~-~D~--~~~~~~~~~~~~   80 (249)
T 1o5i_A           14 ELGIRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLK----RS-----G-HRYVV-CDL--RKDLDLLFEKVK   80 (249)
T ss_dssp             --CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH----HT-----C-SEEEE-CCT--TTCHHHHHHHSC
T ss_pred             HhccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHH----hh-----C-CeEEE-eeH--HHHHHHHHHHhc
Confidence            45699999999999999999999999999999999999973322    21     2 56777 999  556777776653


Q ss_pred             hcCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcc
Q 019722          110 SLNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMI  187 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~  187 (336)
                          ++|+||||||+....  .+.+.++|++.+++|+.+++.++++++|.|++++     .++||++||..+..+     
T Consensus        81 ----~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-----~g~iv~isS~~~~~~-----  146 (249)
T 1o5i_A           81 ----EVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKG-----WGRIVAITSFSVISP-----  146 (249)
T ss_dssp             ----CCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-----CEEEEEECCGGGTSC-----
T ss_pred             ----CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-----CcEEEEEcchHhcCC-----
Confidence                799999999976543  5678899999999999999999999999998865     489999999887655     


Q ss_pred             cccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhH-H-HHHHHHHHhhc
Q 019722          188 RYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFI-T-DLVFFLTSKLL  265 (336)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~-~-~~~~~~~~~~~  265 (336)
                                  .++...|++||++++.|+++++.|+++.|  |+||+|+||++.|++........ . ......+..+.
T Consensus       147 ------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~p~~~~  212 (249)
T 1o5i_A          147 ------------IENLYTSNSARMALTGFLKTLSFEVAPYG--ITVNCVAPGWTETERVKELLSEEKKKQVESQIPMRRM  212 (249)
T ss_dssp             ------------CTTBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCTTHHHHSCHHHHHHHHTTSTTSSC
T ss_pred             ------------CCCCchHHHHHHHHHHHHHHHHHHhhhcC--eEEEEEeeCCCccCcccccchhhHHHHHHhcCCCCCC
Confidence                        56678999999999999999999999888  99999999999999865422111 1 11112223445


Q ss_pred             CChHHHHHHHHHHHhcCccccCCceeeccCcccc
Q 019722          266 KTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAW  299 (336)
Q Consensus       266 ~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  299 (336)
                      .+|+|+|..++++++ +...+++|+.+..+|+..
T Consensus       213 ~~~~dvA~~i~~l~s-~~~~~~tG~~~~vdgG~~  245 (249)
T 1o5i_A          213 AKPEEIASVVAFLCS-EKASYLTGQTIVVDGGLS  245 (249)
T ss_dssp             BCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTCC
T ss_pred             cCHHHHHHHHHHHcC-ccccCCCCCEEEECCCcc
Confidence            689999999999987 667889999999998743

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=100.00  E-value=1e-35  Score=273.65  Aligned_cols=191  Identities=24%  Similarity=0.269  Sum_probs=161.5

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCC-----hHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHH
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARS-----LKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFV  105 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~-----~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~  105 (336)
                      |+|++|++|||||++|||++++++|+++|++|++++|+     .+.++++.+.+...  +.++.++++|++|++++++++
T Consensus         1 M~m~~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~--~~~~~~~~~Dvtd~~~v~~~~   78 (324)
T 3u9l_A            1 MVMSKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDN--DVDLRTLELDVQSQVSVDRAI   78 (324)
T ss_dssp             ----CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHH--TCCEEEEECCTTCHHHHHHHH
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhc--CCcEEEEEeecCCHHHHHHHH
Confidence            46789999999999999999999999999999987765     55566666655554  568999999999999999999


Q ss_pred             HHHHhcCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCcccccc
Q 019722          106 SQFHSLNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFS  183 (336)
Q Consensus       106 ~~~~~~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~  183 (336)
                      +++.+.++++|+||||||+....  .+.+.++|++++++|+.|++.++++++|.|++++     .|+||++||.++....
T Consensus        79 ~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~-----~g~iV~isS~~~~~~~  153 (324)
T 3u9l_A           79 DQIIGEDGRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQK-----HGLLIWISSSSSAGGT  153 (324)
T ss_dssp             HHHHHHHSCCSEEEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-----CEEEEEECCGGGTSCC
T ss_pred             HHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-----CCEEEEEecchhccCC
Confidence            99999999999999999976543  6778899999999999999999999999998876     5899999998776431


Q ss_pred             CCcccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCC
Q 019722          184 GDMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLT  246 (336)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~  246 (336)
                                      .+....|++||+++++++++++.|+++.|  |+||+|+||++.|++.
T Consensus       154 ----------------~~~~~~Y~asKaa~~~~~~~la~el~~~g--I~v~~v~PG~v~t~~~  198 (324)
T 3u9l_A          154 ----------------PPYLAPYFAAKAAMDAIAVQYARELSRWG--IETSIIVPGAFTSGTN  198 (324)
T ss_dssp             ----------------CSSCHHHHHHHHHHHHHHHHHHHHHHTTT--EEEEEEEECCC-----
T ss_pred             ----------------CCcchhHHHHHHHHHHHHHHHHHHhhhhC--cEEEEEECCccccCch
Confidence                            45567899999999999999999999988  9999999999997754

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=100.00  E-value=2.9e-36  Score=281.63  Aligned_cols=254  Identities=13%  Similarity=-0.004  Sum_probs=196.9

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHH-CCCEEEEeeCChHHHH------------HHHHHHHhhCCCCceEEEeccCCCHHH
Q 019722           34 SSVTAIITGATSGIGAETARVLAK-RGARLVLPARSLKAAE------------EAKARLASDCPGSDIVVLPLDLSSLSS  100 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~-~G~~V~~~~r~~~~~~------------~~~~~l~~~~~~~~~~~~~~Dl~~~~~  100 (336)
                      .+|+||||||++|||+++++.|++ +|++|++++|+.+.++            ...+.+++.  +.++..+.+|++++++
T Consensus        60 ~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~--G~~a~~i~~Dvtd~~~  137 (422)
T 3s8m_A           60 GPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAA--GLYSKSINGDAFSDAA  137 (422)
T ss_dssp             SCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHT--TCCEEEEESCTTSHHH
T ss_pred             CCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhc--CCcEEEEEecCCCHHH
Confidence            489999999999999999999999 9999999998865432            122344443  6689999999999999


Q ss_pred             HHHHHHHHHhcC-CCccEEEEcccCC-------------C--CC---------------------CCCCchhhhhHHHHH
Q 019722          101 VRNFVSQFHSLN-LPLNLLINNAGKF-------------A--HQ---------------------HAISEDGIEMTFATN  143 (336)
Q Consensus       101 v~~~~~~~~~~~-~~id~lv~nAg~~-------------~--~~---------------------~~~~~~~~~~~~~vn  143 (336)
                      ++++++++.+.+ |+||+||||||+.             .  +.                     .+.+.++|+.++++|
T Consensus       138 v~~~v~~i~~~~~G~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~v~Vn  217 (422)
T 3s8m_A          138 RAQVIELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTIIQASIEPASAQEIEDTITVM  217 (422)
T ss_dssp             HHHHHHHHHHHSCSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHcCCCCCEEEEcCccccccccccccccccccccccccccccccccccccccccccCCCCHHHHHHHHHhh
Confidence            999999999999 9999999999972             1  11                     146788999999999


Q ss_pred             HhHHH-HHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcccccccccCCCCCCChh--hHhHHHHHHHHHHHHHH
Q 019722          144 YLGHF-LLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDAT--RAYALSKLANVLHTKEL  220 (336)
Q Consensus       144 ~~~~~-~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~Y~~sK~a~~~l~~~l  220 (336)
                      ..+.+ .+++++.+.+...+     +|+||++||.++..+                 .+.+  ..|++||+++.+|+++|
T Consensus       218 ~~~~~~~~~~a~~~~~m~~~-----gG~IVniSSi~g~~~-----------------~p~~~~~aY~ASKaAl~~lTrsL  275 (422)
T 3s8m_A          218 GGQDWELWIDALEGAGVLAD-----GARSVAFSYIGTEIT-----------------WPIYWHGALGKAKVDLDRTAQRL  275 (422)
T ss_dssp             SSHHHHHHHHHHHHTTCEEE-----EEEEEEEEECCCGGG-----------------HHHHTSHHHHHHHHHHHHHHHHH
T ss_pred             chhHHHHHHHHHHHHHHhhC-----CCEEEEEeCchhhcc-----------------CCCccchHHHHHHHHHHHHHHHH
Confidence            99987 78888776433222     489999999988765                 5556  88999999999999999


Q ss_pred             HHHHccCCCcEEEEEeeCCceeCCCCCccchhHH-HHHHHHHHhhcCChHHHHHHHHHHHhcCccccCC-ceeeccCccc
Q 019722          221 AQRLKQMEANVTVNCVHPGIVRTRLTREREGFIT-DLVFFLTSKLLKTIPQGAATTCYVAIHPRLVNVS-GKYFADCNEA  298 (336)
Q Consensus       221 a~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~-~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~-G~~~~~~~~~  298 (336)
                      +.|+++.|  ||||+|+||+|.|++....+.... ......+.++.+.||+++..++||++...  |.+ |+....|+..
T Consensus       276 A~Ela~~G--IRVNaVaPG~i~T~~~~~ip~~~~~~~~~~~~m~r~G~pEdva~~v~~L~sd~l--y~~~~~~~~~d~~~  351 (422)
T 3s8m_A          276 NARLAKHG--GGANVAVLKSVVTQASAAIPVMPLYISMVYKIMKEKGLHEGTIEQLDRLFRERL--YRQDGQPAEVDEQN  351 (422)
T ss_dssp             HHHHHTTT--CEEEEEEECCCCCTTGGGSTHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHTT--TCTTCCCCCCCTTS
T ss_pred             HHHhCccC--EEEEEEEcCCCcChhhhcCCCChHHHHHHHhhhcCCcChHHHHHHHHHHhcchh--hccCCCCcccCCCC
Confidence            99999988  999999999999999887643221 11123367788999999999999998432  444 5655455543


Q ss_pred             c--cccCCCCHHHH---HHHHH
Q 019722          299 W--TSKLGSNSNEA---SRLWA  315 (336)
Q Consensus       299 ~--~~~~~~~~~~~---~~~w~  315 (336)
                      .  ..+.-.+++.+   +.+|+
T Consensus       352 ~~r~d~~e~~~~~q~~~~~~~~  373 (422)
T 3s8m_A          352 RLRLDDWELRDDVQDACKALWP  373 (422)
T ss_dssp             CEESCTTTTSHHHHHHHHHHGG
T ss_pred             CCccchhhCCHHHHHHHHHHHH
Confidence            3  33334455555   44554

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=2.1e-35  Score=265.16  Aligned_cols=219  Identities=26%  Similarity=0.277  Sum_probs=190.0

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      .+++++|++|||||++|||++++++|+++|++|++++|+.+..++..++++..  +.++.++++|++++++++++++++.
T Consensus        26 ~~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~  103 (272)
T 1yb1_A           26 RKSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGL--GAKVHTFVVDCSNREDIYSSAKKVK  103 (272)
T ss_dssp             CCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhc--CCeEEEEEeeCCCHHHHHHHHHHHH
Confidence            56799999999999999999999999999999999999999888888887765  5689999999999999999999999


Q ss_pred             hcCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcc
Q 019722          110 SLNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMI  187 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~  187 (336)
                      +.++++|+||||||+....  .+.+.+++++.+++|+.+++.++++++|.|++++     .++||++||..+..+     
T Consensus       104 ~~~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-----~~~iv~isS~~~~~~-----  173 (272)
T 1yb1_A          104 AEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNN-----HGHIVTVASAAGHVS-----  173 (272)
T ss_dssp             HHTCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-----CEEEEEECCCC-CCC-----
T ss_pred             HHCCCCcEEEECCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-----CCEEEEEechhhcCC-----
Confidence            9999999999999976543  4556788999999999999999999999998765     489999999887654     


Q ss_pred             cccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHc---cCCCcEEEEEeeCCceeCCCCCccchhHHHHHHHHHHhh
Q 019722          188 RYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLK---QMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSKL  264 (336)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~---~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~  264 (336)
                                  .+....|+++|++++.++++++.|+.   +.|  |+||+|+||+++|++.+..         ..+...
T Consensus       174 ------------~~~~~~Y~~sK~a~~~l~~~la~e~~~~~~~g--i~v~~v~Pg~v~t~~~~~~---------~~~~~~  230 (272)
T 1yb1_A          174 ------------VPFLLAYCSSKFAAVGFHKTLTDELAALQITG--VKTTCLCPNFVNTGFIKNP---------STSLGP  230 (272)
T ss_dssp             ------------HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTT--EEEEEEEETHHHHCSTTCT---------HHHHCC
T ss_pred             ------------CCCchhHHHHHHHHHHHHHHHHHHHHHhCCCC--eEEEEEeCCcccCCccccc---------cccccC
Confidence                        55678899999999999999999997   445  9999999999999996531         112345


Q ss_pred             cCChHHHHHHHHHHHhcCc
Q 019722          265 LKTIPQGAATTCYVAIHPR  283 (336)
Q Consensus       265 ~~~~~~~a~~~~~l~~~~~  283 (336)
                      ..+|+++|..+++++..+.
T Consensus       231 ~~~~~dva~~i~~~~~~~~  249 (272)
T 1yb1_A          231 TLEPEEVVNRLMHGILTEQ  249 (272)
T ss_dssp             CCCHHHHHHHHHHHHHTTC
T ss_pred             CCCHHHHHHHHHHHHHcCC
Confidence            6789999999999998543

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=100.00  E-value=4.9e-36  Score=268.98  Aligned_cols=239  Identities=26%  Similarity=0.239  Sum_probs=199.0

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeC-ChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPAR-SLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQF  108 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~  108 (336)
                      .+++++|++|||||++|||++++++|+++|++|++++| +.+..++..++++..  +.++.++++|++|+++++++++++
T Consensus        16 ~~~~~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~   93 (274)
T 1ja9_A           16 SKPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKL--GAQGVAIQADISKPSEVVALFDKA   93 (274)
T ss_dssp             CCTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCCEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHH
Confidence            46789999999999999999999999999999999999 777777777777654  567999999999999999999999


Q ss_pred             HhcCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccc-cccCC
Q 019722          109 HSLNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHS-WFSGD  185 (336)
Q Consensus       109 ~~~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~-~~~~~  185 (336)
                      .+.++++|+||||||.....  .+.+.++|++.+++|+.+++.+++++++.|++       +++||++||..+. .+   
T Consensus        94 ~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-------~~~iv~~sS~~~~~~~---  163 (274)
T 1ja9_A           94 VSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRR-------GGRIILTSSIAAVMTG---  163 (274)
T ss_dssp             HHHHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEE-------EEEEEEECCGGGTCCS---
T ss_pred             HHHcCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh-------CCEEEEEcChHhccCC---
Confidence            99899999999999976543  46778899999999999999999999999862       2799999998776 33   


Q ss_pred             cccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCc------------cc-hh
Q 019722          186 MIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRE------------RE-GF  252 (336)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~------------~~-~~  252 (336)
                                    .+....|+++|++++.+++.++.+++..+  |++|+|+||++.|++...            .. ..
T Consensus       164 --------------~~~~~~Y~~sK~a~~~~~~~~~~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~  227 (274)
T 1ja9_A          164 --------------IPNHALYAGSKAAVEGFCRAFAVDCGAKG--VTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEK  227 (274)
T ss_dssp             --------------CCSCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHH
T ss_pred             --------------CCCCchHHHHHHHHHHHHHHHHHHhhhcC--eEEEEEeeCcccccchhcccccccccccccCchHH
Confidence                          45667899999999999999999999887  999999999999998652            11 11


Q ss_pred             H-HHHHHHHHHhhcCChHHHHHHHHHHHhcCccccCCceeeccCcc
Q 019722          253 I-TDLVFFLTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNE  297 (336)
Q Consensus       253 ~-~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~  297 (336)
                      . .......+......++|+|.++++++. +...+++|+.+..+|+
T Consensus       228 ~~~~~~~~~~~~~~~~~~dva~~i~~l~~-~~~~~~~G~~~~v~gG  272 (274)
T 1ja9_A          228 IDEGLANMNPLKRIGYPADIGRAVSALCQ-EESEWINGQVIKLTGG  272 (274)
T ss_dssp             HHHHHHHTSTTSSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTT
T ss_pred             HHHHHHhcCCCCCccCHHHHHHHHHHHhC-cccccccCcEEEecCC
Confidence            1 111111122345689999999999987 5567889999988875

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=100.00  E-value=3e-35  Score=259.52  Aligned_cols=234  Identities=24%  Similarity=0.308  Sum_probs=191.0

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHh
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHS  110 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  110 (336)
                      +++++|++|||||++|||++++++|+++|++|++++|+.++.++..+++      ..+.++.+|++++++++++++    
T Consensus         3 ~~~~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~------~~~~~~~~D~~~~~~~~~~~~----   72 (244)
T 1cyd_A            3 LNFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKEC------PGIEPVCVDLGDWDATEKALG----   72 (244)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS------TTCEEEECCTTCHHHHHHHHT----
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc------cCCCcEEecCCCHHHHHHHHH----
Confidence            4689999999999999999999999999999999999988776554432      245677999999999988876    


Q ss_pred             cCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccc
Q 019722          111 LNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIR  188 (336)
Q Consensus       111 ~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~  188 (336)
                      .++++|+||||||.....  .+.+.++|++.+++|+.+++.+++++.|.|.+++.    .++||++||..+..+      
T Consensus        73 ~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~----~~~iv~~sS~~~~~~------  142 (244)
T 1cyd_A           73 GIGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGV----PGSIVNVSSMVAHVT------  142 (244)
T ss_dssp             TCCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC----CEEEEEECCGGGTSC------
T ss_pred             HcCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCC----CeEEEEEcchhhcCC------
Confidence            467899999999976532  56678899999999999999999999999987631    379999999876654      


Q ss_pred             ccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCcc---chhHHHHHHHHHHhhc
Q 019722          189 YLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRER---EGFITDLVFFLTSKLL  265 (336)
Q Consensus       189 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~---~~~~~~~~~~~~~~~~  265 (336)
                                 .+....|++||++++.+++.++.++++.+  |++|+|+||++.|++....   ...........+....
T Consensus       143 -----------~~~~~~Y~~sK~a~~~~~~~~a~~~~~~g--i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~  209 (244)
T 1cyd_A          143 -----------FPNLITYSSTKGAMTMLTKAMAMELGPHK--IRVNSVNPTVVLTDMGKKVSADPEFARKLKERHPLRKF  209 (244)
T ss_dssp             -----------CTTBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCBTTHHHHHHTCCHHHHHHHHHHSTTSSC
T ss_pred             -----------CCCcchhHHHHHHHHHHHHHHHHHhhhcC--eEEEEEecCcccCccccccccCHHHHHHHHhcCCccCC
Confidence                       55677899999999999999999999887  9999999999999976532   1111222222223345


Q ss_pred             CChHHHHHHHHHHHhcCccccCCceeeccCccc
Q 019722          266 KTIPQGAATTCYVAIHPRLVNVSGKYFADCNEA  298 (336)
Q Consensus       266 ~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  298 (336)
                      ..++|+|.++++++. +...+++|+.+..+|+.
T Consensus       210 ~~~~dva~~~~~l~~-~~~~~~~G~~~~v~gG~  241 (244)
T 1cyd_A          210 AEVEDVVNSILFLLS-DRSASTSGGGILVDAGY  241 (244)
T ss_dssp             BCHHHHHHHHHHHHS-GGGTTCCSSEEEESTTG
T ss_pred             CCHHHHHHHHHHHhC-chhhcccCCEEEECCCc
Confidence            689999999999987 55678999999888874

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}

Probab=100.00  E-value=3.7e-37  Score=282.89  Aligned_cols=243  Identities=18%  Similarity=0.154  Sum_probs=162.4

Q ss_pred             CCCCCCEEEEeCC--CChHHHHHHHHHHHCCCEEEEeeCCh-----------HHHH-----------HHHHHHHhhCCC-
Q 019722           31 PNLSSVTAIITGA--TSGIGAETARVLAKRGARLVLPARSL-----------KAAE-----------EAKARLASDCPG-   85 (336)
Q Consensus        31 ~~l~gk~~lItGg--s~gIG~aia~~L~~~G~~V~~~~r~~-----------~~~~-----------~~~~~l~~~~~~-   85 (336)
                      ++|+||++|||||  ++|||++++++|+++|++|++++|++           ++++           +..++++..... 
T Consensus         5 ~~l~~k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (319)
T 2ptg_A            5 VDLRGKTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESSRFEQDSFYAQEPSSKVAAEAAEKPVDL   84 (319)
T ss_dssp             CCCTTCEEEEECCCCTTSHHHHHHHHHHHTTCEEEEEECHHHHHHHHC--------------------------------
T ss_pred             cccCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEeccccccchhhhhhhhhhhhhhhhhcchhhhHHHHhhhccccc
Confidence            4589999999999  89999999999999999999998753           1111           122222221000 


Q ss_pred             CceEEEecc------------CCC--------HHHHHHHHHHHHhcCCCccEEEEcccCCC----CCCCCCchhhhhHHH
Q 019722           86 SDIVVLPLD------------LSS--------LSSVRNFVSQFHSLNLPLNLLINNAGKFA----HQHAISEDGIEMTFA  141 (336)
Q Consensus        86 ~~~~~~~~D------------l~~--------~~~v~~~~~~~~~~~~~id~lv~nAg~~~----~~~~~~~~~~~~~~~  141 (336)
                      ....++.+|            +++        +++++++++++.+.++++|+||||||+..    +..+.+.++|+++++
T Consensus        85 ~~~~~~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~  164 (319)
T 2ptg_A           85 VFDKIYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVHSLANGPEVTKPLLQTSRKGYLAAVS  164 (319)
T ss_dssp             CCSEEEECCTTCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHHHHSCEEEEEEEEECCSSSSSCGGGCCHHHHHHHHH
T ss_pred             cccccccccccccccccccchhcccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCCCccccCCHHHHHHHHh
Confidence            012444433            232        45899999999998999999999999753    226678899999999


Q ss_pred             HHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcccccccccCCCCCCChh-hHhHHHHHHHHHHHHHH
Q 019722          142 TNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDAT-RAYALSKLANVLHTKEL  220 (336)
Q Consensus       142 vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Y~~sK~a~~~l~~~l  220 (336)
                      +|+.+++.++++++|+|++       +|+||++||..+..+                 .+.. ..|++||+++++|++++
T Consensus       165 vN~~g~~~l~~~~~~~m~~-------~g~Iv~isS~~~~~~-----------------~~~~~~~Y~asKaal~~l~~~l  220 (319)
T 2ptg_A          165 SSSYSFVSLLQHFLPLMKE-------GGSALALSYIASEKV-----------------IPGYGGGMSSAKAALESDCRTL  220 (319)
T ss_dssp             HHTHHHHHHHHHHGGGEEE-------EEEEEEEEECC-----------------------------------THHHHHHH
T ss_pred             HhhHHHHHHHHHHHHHHhc-------CceEEEEeccccccc-----------------cCccchhhHHHHHHHHHHHHHH
Confidence            9999999999999999954       279999999887665                 4555 58999999999999999


Q ss_pred             HHHHcc-CCCcEEEEEeeCCceeCCCCCccch-----hHHH----HHHHHHHhhcCChHHHHHHHHHHHhcCccccCCce
Q 019722          221 AQRLKQ-MEANVTVNCVHPGIVRTRLTREREG-----FITD----LVFFLTSKLLKTIPQGAATTCYVAIHPRLVNVSGK  290 (336)
Q Consensus       221 a~e~~~-~g~~I~vn~v~PG~v~T~~~~~~~~-----~~~~----~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~  290 (336)
                      +.|+++ .|  |+||+|+||+|+|++.+....     ....    .....+..+..+|+|+|..++|+++ +.+.+++|+
T Consensus       221 a~el~~~~g--Irvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~~v~~L~s-~~~~~itG~  297 (319)
T 2ptg_A          221 AFEAGRARA--VRVNCISAGPLKSRAASAIGKAGDKTFIDLAIDYSEANAPLQKELESDDVGRAALFLLS-PLARAVTGA  297 (319)
T ss_dssp             HHHHHHHHC--CEEEEEEECCCC-------------------------------CCCHHHHHHHHHHHTS-GGGTTCCSC
T ss_pred             HHHhccccC--eeEEEEeeCCccChhhhhcccccchhhHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhC-cccCCccCC
Confidence            999985 77  999999999999998765321     0011    1122344567899999999999987 778899999


Q ss_pred             eeccCccccc
Q 019722          291 YFADCNEAWT  300 (336)
Q Consensus       291 ~~~~~~~~~~  300 (336)
                      .+.++|+...
T Consensus       298 ~i~vdGG~~~  307 (319)
T 2ptg_A          298 TLYVDNGLHA  307 (319)
T ss_dssp             EEEESTTCTT
T ss_pred             EEEECCCcee
Confidence            9999998544

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=100.00  E-value=7e-37  Score=271.67  Aligned_cols=222  Identities=13%  Similarity=0.073  Sum_probs=186.8

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      ..+..+|++|||||++|||++++++|+++|++|++++|+.++.              .-..+.+|++|.++++++++++.
T Consensus        17 ~~~~m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~--------------~~~~~~~d~~d~~~v~~~~~~~~   82 (251)
T 3orf_A           17 RGSHMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPN--------------ADHSFTIKDSGEEEIKSVIEKIN   82 (251)
T ss_dssp             -----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTT--------------SSEEEECSCSSHHHHHHHHHHHH
T ss_pred             cccccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccc--------------cccceEEEeCCHHHHHHHHHHHH
Confidence            4556689999999999999999999999999999999997532              22457899999999999999999


Q ss_pred             hcCCCccEEEEcccCCCCC---CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCc
Q 019722          110 SLNLPLNLLINNAGKFAHQ---HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDM  186 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~~~---~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~  186 (336)
                      +.++++|+||||||+....   .+.+.++|++.+++|+.+++.++++++|.|++       .|+||++||..+..+    
T Consensus        83 ~~~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-------~g~iv~isS~~~~~~----  151 (251)
T 3orf_A           83 SKSIKVDTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQ-------GGLFVLTGASAALNR----  151 (251)
T ss_dssp             TTTCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE-------EEEEEEECCGGGGSC----
T ss_pred             HHcCCCCEEEECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhcc-------CCEEEEEechhhccC----
Confidence            9999999999999976542   45677899999999999999999999999855       379999999988765    


Q ss_pred             ccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHc--cCCCcEEEEEeeCCceeCCCCCccchhHHHHHHHHHHhh
Q 019722          187 IRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLK--QMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSKL  264 (336)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~--~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~  264 (336)
                                   .+....|++||++++.++++++.|++  +.|  |+||+|+||+|+|++.+....       ..+...
T Consensus       152 -------------~~~~~~Y~~sKaa~~~~~~~la~e~~~~~~g--i~v~~v~PG~v~t~~~~~~~~-------~~~~~~  209 (251)
T 3orf_A          152 -------------TSGMIAYGATKAATHHIIKDLASENGGLPAG--STSLGILPVTLDTPTNRKYMS-------DANFDD  209 (251)
T ss_dssp             -------------CTTBHHHHHHHHHHHHHHHHHTSTTSSSCTT--CEEEEEEESCBCCHHHHHHCT-------TSCGGG
T ss_pred             -------------CCCCchhHHHHHHHHHHHHHHHHHhcccCCC--cEEEEEecCcCcCcchhhhcc-------cccccc
Confidence                         67788999999999999999999987  666  999999999999998654211       112345


Q ss_pred             cCChHHHHHHHHHHHhcCccccCCceeeccCccc
Q 019722          265 LKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEA  298 (336)
Q Consensus       265 ~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  298 (336)
                      ..+|+|+|..+++++..+...+++|+.+.+.++.
T Consensus       210 ~~~~~dva~~i~~l~~~~~~~~~tG~~i~v~~g~  243 (251)
T 3orf_A          210 WTPLSEVAEKLFEWSTNSDSRPTNGSLVKFETKS  243 (251)
T ss_dssp             SBCHHHHHHHHHHHHHCGGGCCCTTCEEEEEEET
T ss_pred             cCCHHHHHHHHHHHhcCccccCCcceEEEEecCC
Confidence            6789999999999999657889999999877654

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*

Probab=100.00  E-value=6.8e-37  Score=278.28  Aligned_cols=243  Identities=16%  Similarity=0.109  Sum_probs=185.7

Q ss_pred             CCCCCCEEEEeCCC--ChHHHHHHHHHHHCCCEEEEeeCChHHHH-------HHHHHHHhhCCC---CceEEEecc----
Q 019722           31 PNLSSVTAIITGAT--SGIGAETARVLAKRGARLVLPARSLKAAE-------EAKARLASDCPG---SDIVVLPLD----   94 (336)
Q Consensus        31 ~~l~gk~~lItGgs--~gIG~aia~~L~~~G~~V~~~~r~~~~~~-------~~~~~l~~~~~~---~~~~~~~~D----   94 (336)
                      ++|+||++|||||+  +|||++++++|+++|++|++++|++....       +..++++....+   .....+.+|    
T Consensus         4 ~~l~~k~~lVTGas~~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (297)
T 1d7o_A            4 IDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVFD   83 (297)
T ss_dssp             CCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTCC
T ss_pred             cccCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEeeccccchhhhhhhhhhHhhhhhhhccccccccccccccceecc
Confidence            56899999999999  99999999999999999999998642110       001111110001   112344443    


Q ss_pred             ----CC----C--------HHHHHHHHHHHHhcCCCccEEEEcccCCC----CCCCCCchhhhhHHHHHHhHHHHHHHHH
Q 019722           95 ----LS----S--------LSSVRNFVSQFHSLNLPLNLLINNAGKFA----HQHAISEDGIEMTFATNYLGHFLLTKLL  154 (336)
Q Consensus        95 ----l~----~--------~~~v~~~~~~~~~~~~~id~lv~nAg~~~----~~~~~~~~~~~~~~~vn~~~~~~l~~~~  154 (336)
                          ++    +        +++++++++++.+.++++|+||||||+..    +..+.+.++|++++++|+.+++.+++++
T Consensus        84 ~~~dv~~Dv~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~  163 (297)
T 1d7o_A           84 NPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHF  163 (297)
T ss_dssp             SGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred             chhhhhhhhhccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHH
Confidence                32    2        66899999999988999999999999643    2256788999999999999999999999


Q ss_pred             HHHHHHhhccCCCCCeEEEEcCCccccccCCcccccccccCCCCCCChh-hHhHHHHHHHHHHHHHHHHHHcc-CCCcEE
Q 019722          155 LKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDAT-RAYALSKLANVLHTKELAQRLKQ-MEANVT  232 (336)
Q Consensus       155 ~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Y~~sK~a~~~l~~~la~e~~~-~g~~I~  232 (336)
                      +|.|++       +|+||++||.++..+                 .+.. ..|++||++++.|+++++.|+++ .|  |+
T Consensus       164 ~~~m~~-------~g~iv~isS~~~~~~-----------------~~~~~~~Y~asKaa~~~~~~~la~e~~~~~g--i~  217 (297)
T 1d7o_A          164 LPIMNP-------GGASISLTYIASERI-----------------IPGYGGGMSSAKAALESDTRVLAFEAGRKQN--IR  217 (297)
T ss_dssp             GGGEEE-------EEEEEEEECGGGTSC-----------------CTTCTTTHHHHHHHHHHHHHHHHHHHHHHHC--CE
T ss_pred             HHHhcc-------CceEEEEeccccccC-----------------CCCcchHHHHHHHHHHHHHHHHHHHhCcccC--cE
Confidence            999954       279999999887665                 4444 57999999999999999999985 67  99


Q ss_pred             EEEeeCCceeCCCCCccc---hhHHHHHHHHHHhhcCChHHHHHHHHHHHhcCccccCCceeeccCccccc
Q 019722          233 VNCVHPGIVRTRLTRERE---GFITDLVFFLTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWT  300 (336)
Q Consensus       233 vn~v~PG~v~T~~~~~~~---~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~  300 (336)
                      ||+|+||+|+|++.+...   ..........+..+..+|+|+|..++|+++ +.+.+++|+.+.++|+...
T Consensus       218 vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~l~s-~~~~~itG~~i~vdgG~~~  287 (297)
T 1d7o_A          218 VNTISAGPLGSRAAKAIGFIDTMIEYSYNNAPIQKTLTADEVGNAAAFLVS-PLASAITGATIYVDNGLNS  287 (297)
T ss_dssp             EEEEEECCCBCCCSSCCSHHHHHHHHHHHHSSSCCCBCHHHHHHHHHHHTS-GGGTTCCSCEEEESTTGGG
T ss_pred             EEEEeccccccchhhhccccHHHHHHhhccCCCCCCCCHHHHHHHHHHHhC-ccccCCCCCEEEECCCcee
Confidence            999999999999987632   111111112233456789999999999987 6778999999999988543

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=100.00  E-value=1.5e-36  Score=268.52  Aligned_cols=227  Identities=15%  Similarity=0.071  Sum_probs=160.9

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHh
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHS  110 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  110 (336)
                      |+++||++|||||++|||++++++|++ |++|++++|+.+.+++..+       ..++.++.+|+++..+ ...+.+..+
T Consensus         1 m~l~~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~~~~~~-------~~~~~~~~~D~~~~~~-~~~~~~~~~   71 (245)
T 3e9n_A            1 MSLKKKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEHLAALAE-------IEGVEPIESDIVKEVL-EEGGVDKLK   71 (245)
T ss_dssp             -----CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHHT-------STTEEEEECCHHHHHH-TSSSCGGGT
T ss_pred             CCCCCCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHh-------hcCCcceecccchHHH-HHHHHHHHH
Confidence            468899999999999999999999987 9999999999887665443       2468999999998877 444445556


Q ss_pred             cCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccc
Q 019722          111 LNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIR  188 (336)
Q Consensus       111 ~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~  188 (336)
                      .++++|+||||||+....  .+.+.++|++++++|+.+++.++++++|.|++++      |+||++||..+..+      
T Consensus        72 ~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~------g~iv~isS~~~~~~------  139 (245)
T 3e9n_A           72 NLDHVDTLVHAAAVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAAS------GCVIYINSGAGNGP------  139 (245)
T ss_dssp             TCSCCSEEEECC----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT------CEEEEEC-------------
T ss_pred             hcCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC------CeEEEEcCcccccC------
Confidence            678999999999976543  5667889999999999999999999999998763      89999999988765      


Q ss_pred             ccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHHHHHHHHhhcCCh
Q 019722          189 YLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSKLLKTI  268 (336)
Q Consensus       189 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~  268 (336)
                                 .+....|++||++++.|+++++.|+++.|  |+||+|+||++.|++.+......   ..........+|
T Consensus       140 -----------~~~~~~Y~asK~a~~~~~~~la~e~~~~g--i~v~~v~PG~v~t~~~~~~~~~~---~~~~~~~~~~~p  203 (245)
T 3e9n_A          140 -----------HPGNTIYAASKHALRGLADAFRKEEANNG--IRVSTVSPGPTNTPMLQGLMDSQ---GTNFRPEIYIEP  203 (245)
T ss_dssp             --------------CHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECCC-------------------CCGGGSCH
T ss_pred             -----------CCCchHHHHHHHHHHHHHHHHHHHhhhcC--eEEEEEecCCccCchhhhhhhhh---hcccccccCCCH
Confidence                       66778999999999999999999999988  99999999999999987643221   122344567899


Q ss_pred             HHHHHHHHHHHhcCccccCCceeecc
Q 019722          269 PQGAATTCYVAIHPRLVNVSGKYFAD  294 (336)
Q Consensus       269 ~~~a~~~~~l~~~~~~~~~~G~~~~~  294 (336)
                      +|+|.++++++..+....+.+..+..
T Consensus       204 ~dvA~~i~~l~~~~~~~~~~~i~~~p  229 (245)
T 3e9n_A          204 KEIANAIRFVIDAGETTQITNVDVRP  229 (245)
T ss_dssp             HHHHHHHHHHHTSCTTEEEEEEEEEE
T ss_pred             HHHHHHHHHHHcCCCccceeeeEEEe
Confidence            99999999999866543333343433

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=100.00  E-value=3.8e-36  Score=298.23  Aligned_cols=258  Identities=19%  Similarity=0.179  Sum_probs=192.5

Q ss_pred             ccccCCCCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeC---------ChHHHHHHHHHHHhhCCCCceEEEecc
Q 019722           24 EQVTDGCPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPAR---------SLKAAEEAKARLASDCPGSDIVVLPLD   94 (336)
Q Consensus        24 ~~~~~~~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r---------~~~~~~~~~~~l~~~~~~~~~~~~~~D   94 (336)
                      +++.. ..+|+||++|||||++|||+++|++|+++|++|++++|         +.+.+++..++++..  +..+   .+|
T Consensus         9 ~~~~~-~~~l~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~--~~~~---~~D   82 (613)
T 3oml_A            9 SSSDG-KLRYDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKA--GGEA---VAD   82 (613)
T ss_dssp             -------CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHT--TCCE---EEC
T ss_pred             cCccc-ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHh--CCeE---EEE
Confidence            33343 77899999999999999999999999999999999988         666677777777664  2332   479


Q ss_pred             CCCHHHHHHHHHHHHhcCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEE
Q 019722           95 LSSLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIV  172 (336)
Q Consensus        95 l~~~~~v~~~~~~~~~~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV  172 (336)
                      +++.++++++++++.+.++++|+||||||+....  .+.+.++|++++++|+.|++.++++++|.|++++     .|+||
T Consensus        83 ~~d~~~~~~~~~~~~~~~g~iDiLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~-----~g~IV  157 (613)
T 3oml_A           83 YNSVIDGAKVIETAIKAFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQN-----YGRII  157 (613)
T ss_dssp             CCCGGGHHHHHC----------CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT-----CEEEE
T ss_pred             eCCHHHHHHHHHHHHHHCCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-----CCEEE
Confidence            9999999999999999999999999999987543  5778899999999999999999999999998865     58999


Q ss_pred             EEcCCccccccCCcccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchh
Q 019722          173 NVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGF  252 (336)
Q Consensus       173 ~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~  252 (336)
                      ++||.++..+                 .++...|++||+++++|+++++.|+++.|  |+||+|+||.+ |+|.......
T Consensus       158 ~isS~a~~~~-----------------~~~~~~Y~asKaal~~lt~~la~e~~~~g--I~vn~v~Pg~~-t~~~~~~~~~  217 (613)
T 3oml_A          158 MTSSNSGIYG-----------------NFGQVNYTAAKMGLIGLANTVAIEGARNN--VLCNVIVPTAA-SRMTEGILPD  217 (613)
T ss_dssp             EECCHHHHHC-----------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEEC-------CCCCCH
T ss_pred             EECCHHHcCC-----------------CCCChHHHHHHHHHHHHHHHHHHHhCccC--eEEEEEECCCC-Chhhhhccch
Confidence            9999988876                 66788999999999999999999999988  99999999975 6665543211


Q ss_pred             HHHHHHHHHHhhcCChHHHHHHHHHHHhcCccccCCceeeccCcccc------------ccc---CCCCHHHHHHHHHHH
Q 019722          253 ITDLVFFLTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAW------------TSK---LGSNSNEASRLWAAS  317 (336)
Q Consensus       253 ~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~------------~~~---~~~~~~~~~~~w~~~  317 (336)
                              .......|+++|..++||++ +. .+++|+++.++|+..            ..+   .....+...+.|+.+
T Consensus       218 --------~~~~~~~pedvA~~v~~L~s-~~-~~~tG~~i~vdGG~~~~~~~~~~~g~~~~~~~~~~~~~e~~~~~w~~i  287 (613)
T 3oml_A          218 --------ILFNELKPKLIAPVVAYLCH-ES-CEDNGSYIESAAGWATKLHMVRGKGAVLRPSLDDPVTIEYVKDVWSNV  287 (613)
T ss_dssp             --------HHHTTCCGGGTHHHHHHTTS-TT-CCCCSCEEEEETTEEEEECCCBCCCCCSSSSTTSCCCHHHHHHTHHHH
T ss_pred             --------hhhhcCCHHHHHHHHHHhcC-CC-cCCCceEEEECCCeEEEEEEEecCCEEecCccccCCCHHHHHHHHHHh
Confidence                    01223589999999999997 44 789999999887621            111   123567888999887


Q ss_pred             HHhhc
Q 019722          318 ELLVS  322 (336)
Q Consensus       318 ~~~~~  322 (336)
                      .+...
T Consensus       288 ~~~~~  292 (613)
T 3oml_A          288 TDMSK  292 (613)
T ss_dssp             TCCTT
T ss_pred             hcccc
Confidence            66544

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=3e-35  Score=259.96  Aligned_cols=234  Identities=27%  Similarity=0.288  Sum_probs=183.8

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCC--CEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHh
Q 019722           33 LSSVTAIITGATSGIGAETARVLAKRG--ARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHS  110 (336)
Q Consensus        33 l~gk~~lItGgs~gIG~aia~~L~~~G--~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  110 (336)
                      |++|++|||||++|||++++++|+++|  ++|++++|+.++.+++.+    . .+.++.++++|++++++++++++++.+
T Consensus         1 m~~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~~----~-~~~~~~~~~~D~~~~~~~~~~~~~~~~   75 (250)
T 1yo6_A            1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKS----I-KDSRVHVLPLTVTCDKSLDTFVSKVGE   75 (250)
T ss_dssp             CCCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHT----C-CCTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHHh----c-cCCceEEEEeecCCHHHHHHHHHHHHH
Confidence            468999999999999999999999999  999999999877654322    1 256899999999999999999999998


Q ss_pred             cCC--CccEEEEcccCCC-CC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHh------hccCCCCCeEEEEcCCcc
Q 019722          111 LNL--PLNLLINNAGKFA-HQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIET------AKATGIQGRIVNVSSSIH  179 (336)
Q Consensus       111 ~~~--~id~lv~nAg~~~-~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~------~~~~~~~grIV~vsS~~~  179 (336)
                      .++  ++|+||||||+.. ..  .+.+.+++++.+++|+.+++.++++++|.|+++      +......++||++||..+
T Consensus        76 ~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~  155 (250)
T 1yo6_A           76 IVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLG  155 (250)
T ss_dssp             HHGGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGG
T ss_pred             hcCCCCCcEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEeccCcc
Confidence            887  8999999999765 22  556788999999999999999999999999876      210111489999999877


Q ss_pred             ccccCCcccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHHHHH
Q 019722          180 SWFSGDMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFF  259 (336)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~  259 (336)
                      ..+....          ....++...|++||++++.++++++.++.+.|  |+||+|+||++.|++.+.           
T Consensus       156 ~~~~~~~----------~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~-----------  212 (250)
T 1yo6_A          156 SITDNTS----------GSAQFPVLAYRMSKAAINMFGRTLAVDLKDDN--VLVVNFCPGWVQTNLGGK-----------  212 (250)
T ss_dssp             CSTTCCS----------TTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGT--CEEEEEECCCC------------------
T ss_pred             ccCCccc----------ccccCCccHHHHHHHHHHHHHHHHHHHhccCC--eEEEEEcCCceecCCCCC-----------
Confidence            6542100          00124667899999999999999999999877  999999999999998653           


Q ss_pred             HHHhhcCChHHHHHHHHHHHhcCccccCCceeeccCccc
Q 019722          260 LTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEA  298 (336)
Q Consensus       260 ~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  298 (336)
                         ....+++++|..+++++..+ ..+++|+++..+|+.
T Consensus       213 ---~~~~~~~~~a~~~~~~~~~~-~~~~~G~~~~~~g~~  247 (250)
T 1yo6_A          213 ---NAALTVEQSTAELISSFNKL-DNSHNGRFFMRNLKP  247 (250)
T ss_dssp             ---------HHHHHHHHHHHTTC-CGGGTTCEEETTEEE
T ss_pred             ---CCCCCHHHHHHHHHHHHhcc-cccCCCeEEEECCcC
Confidence               12467899999999999844 467899999888753

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=6.7e-37  Score=269.19  Aligned_cols=221  Identities=13%  Similarity=0.063  Sum_probs=186.3

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcC
Q 019722           33 LSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLN  112 (336)
Q Consensus        33 l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  112 (336)
                      |++|++|||||++|||++++++|+++|++|++++|+.+...            ....++++|++++++++++++++.+.+
T Consensus         1 m~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~------------~~~~~~~~D~~~~~~~~~~~~~~~~~~   68 (236)
T 1ooe_A            1 MSSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA------------DSNILVDGNKNWTEQEQSILEQTASSL   68 (236)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS------------SEEEECCTTSCHHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCccccc------------cccEEEeCCCCCHHHHHHHHHHHHHHh
Confidence            46899999999999999999999999999999999876421            246778999999999999999998888


Q ss_pred             --CCccEEEEcccCCCCC---CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcc
Q 019722          113 --LPLNLLINNAGKFAHQ---HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMI  187 (336)
Q Consensus       113 --~~id~lv~nAg~~~~~---~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~  187 (336)
                        +++|+||||||+....   .+.+.++|++.+++|+.+++.++++++|.|++       .|+||++||..+..+     
T Consensus        69 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-------~g~iv~isS~~~~~~-----  136 (236)
T 1ooe_A           69 QGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKP-------GGLLQLTGAAAAMGP-----  136 (236)
T ss_dssp             TTCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE-------EEEEEEECCGGGGSC-----
T ss_pred             CCCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc-------CCEEEEECchhhccC-----
Confidence              7999999999976432   35567889999999999999999999999854       279999999887765     


Q ss_pred             cccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHc--cCCCcEEEEEeeCCceeCCCCCccchhHHHHHHHHHHhhc
Q 019722          188 RYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLK--QMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSKLL  265 (336)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~--~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~  265 (336)
                                  .+....|++||++++.|+++++.|++  +.|  |+||+|+||+++|++.+.....       ......
T Consensus       137 ------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~g--i~v~~v~Pg~v~t~~~~~~~~~-------~~~~~~  195 (236)
T 1ooe_A          137 ------------TPSMIGYGMAKAAVHHLTSSLAAKDSGLPDN--SAVLTIMPVTLDTPMNRKWMPN-------ADHSSW  195 (236)
T ss_dssp             ------------CTTBHHHHHHHHHHHHHHHHHHSTTSSCCTT--CEEEEEEESCBCCHHHHHHSTT-------CCGGGC
T ss_pred             ------------CCCcHHHHHHHHHHHHHHHHHHHHhcccCCC--eEEEEEecCcccCcchhhcCCC-------cccccc
Confidence                        66778999999999999999999998  777  9999999999999985432110       001234


Q ss_pred             CChHHHHHHHHHHHhcCccccCCceeeccCccc
Q 019722          266 KTIPQGAATTCYVAIHPRLVNVSGKYFADCNEA  298 (336)
Q Consensus       266 ~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  298 (336)
                      .+++|+|..+++++.++...+++|+++..+|+.
T Consensus       196 ~~~~dvA~~i~~~l~s~~~~~~~G~~~~v~gg~  228 (236)
T 1ooe_A          196 TPLSFISEHLLKWTTETSSRPSSGALLKITTEN  228 (236)
T ss_dssp             BCHHHHHHHHHHHHHCGGGCCCTTCEEEEEEET
T ss_pred             CCHHHHHHHHHHHHcCCCcccccccEEEEecCC
Confidence            578999999998876688899999999888764

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=100.00  E-value=6e-35  Score=261.13  Aligned_cols=235  Identities=24%  Similarity=0.262  Sum_probs=192.2

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCC---CEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRG---ARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVS  106 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G---~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~  106 (336)
                      ..++++|++|||||++|||++++++|+++|   ++|++++|+.+..+.+ +++...  +.++.++.+|++++++++++++
T Consensus        16 ~~~~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~-~~l~~~--~~~~~~~~~Dl~~~~~v~~~~~   92 (267)
T 1sny_A           16 PRGSHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKEL-EDLAKN--HSNIHILEIDLRNFDAYDKLVA   92 (267)
T ss_dssp             ----CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHH-HHHHHH--CTTEEEEECCTTCGGGHHHHHH
T ss_pred             ccCCCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHH-HHhhcc--CCceEEEEecCCChHHHHHHHH
Confidence            556899999999999999999999999999   9999999998765533 444444  4589999999999999999999


Q ss_pred             HHHhcCC--CccEEEEcccCCC-C--CCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhcc------CCCCCeEEEEc
Q 019722          107 QFHSLNL--PLNLLINNAGKFA-H--QHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKA------TGIQGRIVNVS  175 (336)
Q Consensus       107 ~~~~~~~--~id~lv~nAg~~~-~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~------~~~~grIV~vs  175 (336)
                      ++.+.++  ++|+||||||+.. .  ..+.+.+++++.+++|+.+++.++++++|.|.++...      ....++||++|
T Consensus        93 ~~~~~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~is  172 (267)
T 1sny_A           93 DIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMS  172 (267)
T ss_dssp             HHHHHHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEEC
T ss_pred             HHHHhcCCCCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCCceEEEEe
Confidence            9988887  8999999999865 2  2556788999999999999999999999999876211      01137999999


Q ss_pred             CCccccccCCcccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHH
Q 019722          176 SSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITD  255 (336)
Q Consensus       176 S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~  255 (336)
                      |..+..+...              .++...|++||++++.|++.++.++.+.|  |+||+|+||+|+|++....      
T Consensus       173 S~~~~~~~~~--------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~Pg~v~t~~~~~~------  230 (267)
T 1sny_A          173 SILGSIQGNT--------------DGGMYAYRTSKSALNAATKSLSVDLYPQR--IMCVSLHPGWVKTDMGGSS------  230 (267)
T ss_dssp             CGGGCSTTCC--------------SCCCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEECCCSBCSTTTCTT------
T ss_pred             cccccccCCC--------------CCCchHHHHHHHHHHHHHHHHHHHhhcCC--cEEEEeCCcceecCCCCCC------
Confidence            9877654110              23566799999999999999999999888  9999999999999997541      


Q ss_pred             HHHHHHHhhcCChHHHHHHHHHHHhcCccccCCceeeccCccc
Q 019722          256 LVFFLTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEA  298 (336)
Q Consensus       256 ~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  298 (336)
                              ...+|++++..+++++.. ....++|+++..+|..
T Consensus       231 --------~~~~~~~~a~~~~~~~~~-~~~~~~G~~~~~~g~~  264 (267)
T 1sny_A          231 --------APLDVPTSTGQIVQTISK-LGEKQNGGFVNYDGTP  264 (267)
T ss_dssp             --------CSBCHHHHHHHHHHHHHH-CCGGGTTCEECTTSCB
T ss_pred             --------CCCCHHHHHHHHHHHHHh-cCcCCCCcEEccCCcC
Confidence                    246789999999999984 4467899999887753

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=100.00  E-value=7.5e-37  Score=269.79  Aligned_cols=221  Identities=12%  Similarity=0.042  Sum_probs=185.1

Q ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhc
Q 019722           32 NLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSL  111 (336)
Q Consensus        32 ~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  111 (336)
                      ..++|++|||||++|||++++++|+++|++|++++|+.++..            ....++++|++++++++++++++.+.
T Consensus         4 ~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~------------~~~~~~~~D~~~~~~v~~~~~~~~~~   71 (241)
T 1dhr_A            4 SGEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA------------SASVIVKMTDSFTEQADQVTAEVGKL   71 (241)
T ss_dssp             --CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS------------SEEEECCCCSCHHHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhcc------------CCcEEEEcCCCCHHHHHHHHHHHHHH
Confidence            357899999999999999999999999999999999875421            24678899999999999999999988


Q ss_pred             C--CCccEEEEcccCCCCC---CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCc
Q 019722          112 N--LPLNLLINNAGKFAHQ---HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDM  186 (336)
Q Consensus       112 ~--~~id~lv~nAg~~~~~---~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~  186 (336)
                      +  +++|+||||||+....   .+.+.++|++.+++|+.+++.++++++|.|++       +|+||++||..+..+    
T Consensus        72 ~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~-------~g~iv~isS~~~~~~----  140 (241)
T 1dhr_A           72 LGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKE-------GGLLTLAGAKAALDG----  140 (241)
T ss_dssp             HTTCCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE-------EEEEEEECCGGGGSC----
T ss_pred             hCCCCCCEEEEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhcc-------CCEEEEECCHHHccC----
Confidence            8  7999999999976432   45667899999999999999999999999854       379999999887765    


Q ss_pred             ccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHc--cCCCcEEEEEeeCCceeCCCCCccchhHHHHHHHHHHhh
Q 019722          187 IRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLK--QMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSKL  264 (336)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~--~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~  264 (336)
                                   .++...|++||++++.|+++++.|++  +.|  |+||+|+||+++|++........       ....
T Consensus       141 -------------~~~~~~Y~asK~a~~~~~~~la~e~~~~~~g--i~v~~v~PG~v~T~~~~~~~~~~-------~~~~  198 (241)
T 1dhr_A          141 -------------TPGMIGYGMAKGAVHQLCQSLAGKNSGMPSG--AAAIAVLPVTLDTPMNRKSMPEA-------DFSS  198 (241)
T ss_dssp             -------------CTTBHHHHHHHHHHHHHHHHHTSTTSSCCTT--CEEEEEEESCEECHHHHHHSTTS-------CGGG
T ss_pred             -------------CCCchHHHHHHHHHHHHHHHHHHHhccCCCC--eEEEEEecCcccCccccccCcch-------hhcc
Confidence                         56778999999999999999999998  777  99999999999999855321100       0122


Q ss_pred             cCChHHHHHHHHHHHhcCccccCCceeeccCccc
Q 019722          265 LKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEA  298 (336)
Q Consensus       265 ~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  298 (336)
                      ..+++|+|..++++++ +...+++|+++.++|..
T Consensus       199 ~~~~~~vA~~v~~l~~-~~~~~~~G~~~~v~g~~  231 (241)
T 1dhr_A          199 WTPLEFLVETFHDWIT-GNKRPNSGSLIQVVTTD  231 (241)
T ss_dssp             SEEHHHHHHHHHHHHT-TTTCCCTTCEEEEEEET
T ss_pred             CCCHHHHHHHHHHHhc-CCCcCccceEEEEeCCC
Confidence            3467999999999986 67788999999888753

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=100.00  E-value=1.4e-35  Score=273.20  Aligned_cols=233  Identities=21%  Similarity=0.199  Sum_probs=179.4

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHh----hCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLAS----DCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~----~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      +||++|||||++|||++++++|+++|++|++++|+....++..+.++.    ...+.++.++++|++++++++++++++.
T Consensus         1 ~~k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~   80 (327)
T 1jtv_A            1 ARTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVT   80 (327)
T ss_dssp             CCEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHHHh
Confidence            479999999999999999999999999988887765433332222221    1124689999999999999999999873


Q ss_pred             hcCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcc
Q 019722          110 SLNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMI  187 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~  187 (336)
                        ++++|+||||||+....  .+.+.++|++++++|+.+++.++++++|.|++++     .++||++||.++..+     
T Consensus        81 --~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~-----~g~IV~isS~~~~~~-----  148 (327)
T 1jtv_A           81 --EGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRG-----SGRVLVTGSVGGLMG-----  148 (327)
T ss_dssp             --TSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-----CEEEEEEEEGGGTSC-----
T ss_pred             --cCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-----CCEEEEECCcccccC-----
Confidence              58999999999975432  5678899999999999999999999999998765     489999999887765     


Q ss_pred             cccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhH-----------H--
Q 019722          188 RYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFI-----------T--  254 (336)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~-----------~--  254 (336)
                                  .+....|++||++++.|+++++.|+.+.|  |+||+|+||+|+|++.+......           .  
T Consensus       149 ------------~~~~~~Y~aSK~a~~~~~~~la~el~~~g--I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~  214 (327)
T 1jtv_A          149 ------------LPFNDVYCASKFALEGLCESLAVLLLPFG--VHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHR  214 (327)
T ss_dssp             ------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCBCC-------CCHHHHHHTSCHHHHHH
T ss_pred             ------------CCCChHHHHHHHHHHHHHHHHHHHhhhcC--cEEEEEEeCcccChHHhhhhhcchhhhccCCHHHHHH
Confidence                        55677899999999999999999999888  99999999999999976532110           0  


Q ss_pred             --HHHHH--HHHhh-cCChHHHHHHHHHHHhcC--ccccCCceee
Q 019722          255 --DLVFF--LTSKL-LKTIPQGAATTCYVAIHP--RLVNVSGKYF  292 (336)
Q Consensus       255 --~~~~~--~~~~~-~~~~~~~a~~~~~l~~~~--~~~~~~G~~~  292 (336)
                        .....  .+..+ ..+|+++|..+++++.++  ...+++|+.+
T Consensus       215 ~~~~~~~~~~~~~~~~~~pedvA~~i~~l~~~~~~~~~~~tg~~~  259 (327)
T 1jtv_A          215 FYQYLAHSKQVFREAAQNPEEVAEVFLTALRAPKPTLRYFTTERF  259 (327)
T ss_dssp             HHHHHHHHHHHHHHHCBCHHHHHHHHHHHHHCSSCCSEEESCSTT
T ss_pred             HHHHHHHHHHhhhhcCCCHHHHHHHHHHHHcCCCCCeEEEeCchH
Confidence              00000  01122 358999999999999864  3566777554

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=100.00  E-value=9.5e-35  Score=260.29  Aligned_cols=238  Identities=26%  Similarity=0.375  Sum_probs=191.7

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHH-CCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhc
Q 019722           33 LSSVTAIITGATSGIGAETARVLAK-RGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSL  111 (336)
Q Consensus        33 l~gk~~lItGgs~gIG~aia~~L~~-~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  111 (336)
                      .++|++|||||++|||++++++|++ +|++|++++|+.++.++..++++..  +.++.++.+|+++.++++.+++++.+.
T Consensus         2 ~~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~   79 (276)
T 1wma_A            2 SGIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAE--GLSPRFHQLDIDDLQSIRALRDFLRKE   79 (276)
T ss_dssp             CCCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHT--TCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhc--CCeeEEEECCCCCHHHHHHHHHHHHHh
Confidence            4689999999999999999999999 9999999999999888888888765  467899999999999999999999998


Q ss_pred             CCCccEEEEcccCCCCC-CCCC-chhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCc---
Q 019722          112 NLPLNLLINNAGKFAHQ-HAIS-EDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDM---  186 (336)
Q Consensus       112 ~~~id~lv~nAg~~~~~-~~~~-~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~---  186 (336)
                      ++++|+||||||+.... ...+ .+++++++++|+.+++.++++++|.|++       .++||++||..+..+....   
T Consensus        80 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-------~g~iv~~sS~~~~~~~~~~~~~  152 (276)
T 1wma_A           80 YGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKP-------QGRVVNVSSIMSVRALKSCSPE  152 (276)
T ss_dssp             HSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEE-------EEEEEEECCHHHHHHHHTSCHH
T ss_pred             cCCCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCC-------CCEEEEECChhhhcccccCChh
Confidence            99999999999976543 2223 4789999999999999999999998854       2699999998765421000   


Q ss_pred             --ccccccc-------------------c-CCCCCCChhhHhHHHHHHHHHHHHHHHHHHcc----CCCcEEEEEeeCCc
Q 019722          187 --IRYLGQI-------------------S-RNKSHYDATRAYALSKLANVLHTKELAQRLKQ----MEANVTVNCVHPGI  240 (336)
Q Consensus       187 --~~~~~~~-------------------~-~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~----~g~~I~vn~v~PG~  240 (336)
                        ..++...                   . ......+. ..|++||++++.+++.++.++.+    .|  |+||+|+||+
T Consensus       153 ~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Y~~sK~a~~~~~~~la~~~~~~~~~~~--i~v~~v~PG~  229 (276)
T 1wma_A          153 LQQKFRSETITEEELVGLMNKFVEDTKKGVHQKEGWPS-SAYGVTKIGVTVLSRIHARKLSEQRKGDK--ILLNACCPGW  229 (276)
T ss_dssp             HHHHHHCSSCCHHHHHHHHHHHHHHHHTTCTTTTTCCS-CHHHHHHHHHHHHHHHHHHHHHHHCTTSC--CEEEEEECCS
T ss_pred             HHhhccccccchhhhhhhhhhhhhhhcccccccCCCcc-chhHHHHHHHHHHHHHHHHHhhcccCCCc--eEEEEecCCc
Confidence              0000000                   0 00001122 68999999999999999999987    56  9999999999


Q ss_pred             eeCCCCCccchhHHHHHHHHHHhhcCChHHHHHHHHHHHhcCc-cccCCceeeccCc
Q 019722          241 VRTRLTREREGFITDLVFFLTSKLLKTIPQGAATTCYVAIHPR-LVNVSGKYFADCN  296 (336)
Q Consensus       241 v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~-~~~~~G~~~~~~~  296 (336)
                      |.|++.+.              ....+|+++|..++++++.+. ..+++|+++..++
T Consensus       230 v~t~~~~~--------------~~~~~~~~~a~~~~~l~~~~~~~~~~~G~~~~~~~  272 (276)
T 1wma_A          230 VRTDMAGP--------------KATKSPEEGAETPVYLALLPPDAEGPHGQFVSEKR  272 (276)
T ss_dssp             BCSTTTCT--------------TCSBCHHHHTHHHHHHHSCCTTCCCCCSCEEETTE
T ss_pred             cccCcCCc--------------cccCChhHhhhhHhhhhcCcccccccCceEeccCc
Confidence            99999764              135789999999999998664 4689999997544

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=100.00  E-value=2.7e-34  Score=270.36  Aligned_cols=255  Identities=12%  Similarity=0.011  Sum_probs=199.6

Q ss_pred             CCCCEEEEeCCCChHHHH--HHHHHHHCCCEEEEeeCChHH------------HHHHHHHHHhhCCCCceEEEeccCCCH
Q 019722           33 LSSVTAIITGATSGIGAE--TARVLAKRGARLVLPARSLKA------------AEEAKARLASDCPGSDIVVLPLDLSSL   98 (336)
Q Consensus        33 l~gk~~lItGgs~gIG~a--ia~~L~~~G~~V~~~~r~~~~------------~~~~~~~l~~~~~~~~~~~~~~Dl~~~   98 (336)
                      ..||+||||||++|||++  +++.|+++|++|++++|+...            .+.+.+.+++.  +.++.++++|++++
T Consensus        58 ~~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~~~~~~~~Dvtd~  135 (418)
T 4eue_A           58 RGPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKK--GLVAKNFIEDAFSN  135 (418)
T ss_dssp             CCCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHT--TCCEEEEESCTTCH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHc--CCcEEEEEeeCCCH
Confidence            689999999999999999  999999999999999987533            12223333332  56899999999999


Q ss_pred             HHHHHHHHHHHhcCCCccEEEEcccCCC---------------CC---------------------CCCCchhhhhHHHH
Q 019722           99 SSVRNFVSQFHSLNLPLNLLINNAGKFA---------------HQ---------------------HAISEDGIEMTFAT  142 (336)
Q Consensus        99 ~~v~~~~~~~~~~~~~id~lv~nAg~~~---------------~~---------------------~~~~~~~~~~~~~v  142 (336)
                      ++++++++++.+.+|+||+||||||...               +.                     .+.+.++|+.++++
T Consensus       136 ~~v~~~v~~i~~~~G~IDiLVnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~~~v  215 (418)
T 4eue_A          136 ETKDKVIKYIKDEFGKIDLFVYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTIDVERDEITLKKVSSASIEEIEETRKV  215 (418)
T ss_dssp             HHHHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCBSSSCEEEEEEETTTTEEEEEEECBCCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcCCCCEEEECCcccccccccccccccccccccccccccccccccccccccccccCCCHHHHHHHHHH
Confidence            9999999999999999999999999741               11                     23578899999999


Q ss_pred             HHhHHH-HHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcccccccccCCCCCCChh--hHhHHHHHHHHHHHHH
Q 019722          143 NYLGHF-LLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDAT--RAYALSKLANVLHTKE  219 (336)
Q Consensus       143 n~~~~~-~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~Y~~sK~a~~~l~~~  219 (336)
                      |..+.+ .+++++.+.+...+     +|+||++||.++..+                 .+.+  ..|++||+++++|+++
T Consensus       216 n~~~~~~~~~~~l~~~~~~~~-----gg~IV~iSSi~~~~~-----------------~p~~~~~aY~ASKaAL~~ltrs  273 (418)
T 4eue_A          216 MGGEDWQEWCEELLYEDCFSD-----KATTIAYSYIGSPRT-----------------YKIYREGTIGIAKKDLEDKAKL  273 (418)
T ss_dssp             HSSHHHHHHHHHHHHTTCEEE-----EEEEEEEECCCCGGG-----------------TTTTTTSHHHHHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHhhhcC-----CcEEEEEeCchhcCC-----------------CCccccHHHHHHHHHHHHHHHH
Confidence            999988 77787776543332     489999999988766                 5556  8999999999999999


Q ss_pred             HHHHHcc-CCCcEEEEEeeCCceeCCCCCccchhHH-HHHHHHHHhhcCChHHHHHHHHHHHhcCccccCCceeeccCcc
Q 019722          220 LAQRLKQ-MEANVTVNCVHPGIVRTRLTREREGFIT-DLVFFLTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNE  297 (336)
Q Consensus       220 la~e~~~-~g~~I~vn~v~PG~v~T~~~~~~~~~~~-~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~  297 (336)
                      |+.|+++ .|  ||||+|+||+|.|++....+.... ........+..+.+|+++..+.++++.   .+.+|+.+..|+.
T Consensus       274 LA~ELa~~~G--IrVN~V~PG~v~T~~s~~ip~~p~y~~~~~~~mk~~G~~E~v~e~~~~L~sd---~~~~g~~~~~D~~  348 (418)
T 4eue_A          274 INEKLNRVIG--GRAFVSVNKALVTKASAYIPTFPLYAAILYKVMKEKNIHENCIMQIERMFSE---KIYSNEKIQFDDK  348 (418)
T ss_dssp             HHHHHHHHHS--CEEEEEECCCCCCHHHHTSTTHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHH---TTSSSSCCCCCTT
T ss_pred             HHHHhCCccC--eEEEEEECCcCcChhhhcCCCCcHHHHHHHHHHhhcCChHHHHHHHHHHhhc---cccCCCccccCCC
Confidence            9999999 88  999999999999999887653211 111222456678999999999999983   4568988666664


Q ss_pred             --cccccCCCCHHHH---HHHHHH
Q 019722          298 --AWTSKLGSNSNEA---SRLWAA  316 (336)
Q Consensus       298 --~~~~~~~~~~~~~---~~~w~~  316 (336)
                        ....+...+++.+   +++|++
T Consensus       349 ~~~r~d~~e~~~~~q~~~~~~~~~  372 (418)
T 4eue_A          349 GRLRMDDLELRKDVQDEVDRIWSN  372 (418)
T ss_dssp             SCEESCTTTTCHHHHHHHHHHHHH
T ss_pred             ceeeCChhhcCHHHHHHHHHHHHH
Confidence              3444555566665   455553

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=100.00  E-value=5.2e-34  Score=257.88  Aligned_cols=221  Identities=22%  Similarity=0.203  Sum_probs=184.9

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHh
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHS  110 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  110 (336)
                      .+++||++|||||++|||++++++|+++|++|++++|+.+++++..+++.... ..++.++.+|++|+++++++++++.+
T Consensus        24 ~~~~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~d~~~v~~~~~~~~~  102 (286)
T 1xu9_A           24 EMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELG-AASAHYIAGTMEDMTFAEQFVAQAGK  102 (286)
T ss_dssp             GGGTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHT-CSEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             hhcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhC-CCceEEEeCCCCCHHHHHHHHHHHHH
Confidence            34889999999999999999999999999999999999998888887776652 34799999999999999999999998


Q ss_pred             cCCCccEEEEc-ccCCCCC-CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccc
Q 019722          111 LNLPLNLLINN-AGKFAHQ-HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIR  188 (336)
Q Consensus       111 ~~~~id~lv~n-Ag~~~~~-~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~  188 (336)
                      .++++|+|||| ||..... .+.+.+++++++++|+.+++.++++++|.|++.      .|+||++||.++..+      
T Consensus       103 ~~g~iD~li~naag~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~------~g~iv~isS~~~~~~------  170 (286)
T 1xu9_A          103 LMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQS------NGSIVVVSSLAGKVA------  170 (286)
T ss_dssp             HHTSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH------TCEEEEEEEGGGTSC------
T ss_pred             HcCCCCEEEECCccCCCCccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHC------CCEEEEECCcccccC------
Confidence            88999999999 5765433 455788999999999999999999999998765      389999999887665      


Q ss_pred             ccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHHHHHHHHhhcCCh
Q 019722          189 YLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSKLLKTI  268 (336)
Q Consensus       189 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~  268 (336)
                                 .++...|++||++++.++++++.|+...+.+|+|++|+||+++|++.......       .......++
T Consensus       171 -----------~~~~~~Y~asK~a~~~~~~~l~~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~-------~~~~~~~~~  232 (286)
T 1xu9_A          171 -----------YPMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMKAVSG-------IVHMQAAPK  232 (286)
T ss_dssp             -----------CTTCHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHHHHHSCG-------GGGGGCBCH
T ss_pred             -----------CCCccHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeecCccCChhHHHhccc-------cccCCCCCH
Confidence                       56678899999999999999999994322349999999999999985431100       012235688


Q ss_pred             HHHHHHHHHHHhcC
Q 019722          269 PQGAATTCYVAIHP  282 (336)
Q Consensus       269 ~~~a~~~~~l~~~~  282 (336)
                      +++|..++..+..+
T Consensus       233 ~~vA~~i~~~~~~~  246 (286)
T 1xu9_A          233 EECALEIIKGGALR  246 (286)
T ss_dssp             HHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHhcC
Confidence            99999999988744

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=1.1e-33  Score=248.98  Aligned_cols=229  Identities=23%  Similarity=0.199  Sum_probs=185.4

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCCC
Q 019722           35 SVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLP  114 (336)
Q Consensus        35 gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  114 (336)
                      +|++|||||++|||++++++|+++|++|++++|+.+ .             .++.++++|++++++++++++++ +.+++
T Consensus         2 ~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~-~-------------~~~~~~~~D~~~~~~~~~~~~~~-~~~~~   66 (242)
T 1uay_A            2 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE-G-------------EDLIYVEGDVTREEDVRRAVARA-QEEAP   66 (242)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC-S-------------SSSEEEECCTTCHHHHHHHHHHH-HHHSC
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc-c-------------cceEEEeCCCCCHHHHHHHHHHH-HhhCC
Confidence            689999999999999999999999999999999864 1             24588999999999999999999 77889


Q ss_pred             ccEEEEcccCCCCC--CCCC----chhhhhHHHHHHhHHHHHHHHHHHHHHHhhcc-CCCCCeEEEEcCCccccccCCcc
Q 019722          115 LNLLINNAGKFAHQ--HAIS----EDGIEMTFATNYLGHFLLTKLLLKKMIETAKA-TGIQGRIVNVSSSIHSWFSGDMI  187 (336)
Q Consensus       115 id~lv~nAg~~~~~--~~~~----~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~-~~~~grIV~vsS~~~~~~~~~~~  187 (336)
                      +|++|||||.....  .+.+    .++|++.+++|+.+++.+++++.|.|.+++.. .+..++||++||..+..+     
T Consensus        67 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~-----  141 (242)
T 1uay_A           67 LFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEG-----  141 (242)
T ss_dssp             EEEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHC-----
T ss_pred             ceEEEEcccccCcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccC-----
Confidence            99999999976543  2333    34899999999999999999999999764200 011249999999887665     


Q ss_pred             cccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHHH-HHHHH-hhc
Q 019722          188 RYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLV-FFLTS-KLL  265 (336)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~-~~~~~-~~~  265 (336)
                                  .+....|++||++++.+++.++.|+.+.|  |+||+|+||++.|++............ ...+. .+.
T Consensus       142 ------------~~~~~~Y~~sK~a~~~~~~~l~~e~~~~g--i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~  207 (242)
T 1uay_A          142 ------------QIGQAAYAASKGGVVALTLPAARELAGWG--IRVVTVAPGLFDTPLLQGLPEKAKASLAAQVPFPPRL  207 (242)
T ss_dssp             ------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSCSSHHHHTSCHHHHHHHHTTCCSSCSC
T ss_pred             ------------CCCCchhhHHHHHHHHHHHHHHHHHhhcC--cEEEEEEeccCcchhhhccchhHHHHHHhhCCCcccC
Confidence                        55677899999999999999999999887  999999999999998765432211111 11122 345


Q ss_pred             CChHHHHHHHHHHHhcCccccCCceeeccCccccc
Q 019722          266 KTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWT  300 (336)
Q Consensus       266 ~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~  300 (336)
                      .+|+|+|..+++++.+   .+++|+.+..+|+...
T Consensus       208 ~~~~dva~~~~~l~~~---~~~~G~~~~v~gG~~~  239 (242)
T 1uay_A          208 GRPEEYAALVLHILEN---PMLNGEVVRLDGALRM  239 (242)
T ss_dssp             CCHHHHHHHHHHHHHC---TTCCSCEEEESTTCCC
T ss_pred             CCHHHHHHHHHHHhcC---CCCCCcEEEEcCCeec
Confidence            6899999999999984   6789999998887543

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=100.00  E-value=7.1e-35  Score=259.21  Aligned_cols=233  Identities=18%  Similarity=0.161  Sum_probs=169.0

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCCCc
Q 019722           36 VTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLPL  115 (336)
Q Consensus        36 k~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i  115 (336)
                      |++|||||++|||++++++|+++|++|++++|+.++.+           . .   +++|++++++++++++++   ++++
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~-----------~-~---~~~Dl~~~~~v~~~~~~~---~~~i   63 (257)
T 1fjh_A            2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVI-----------A-D---LSTAEGRKQAIADVLAKC---SKGM   63 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEE-----------C-C---TTSHHHHHHHHHHHHTTC---TTCC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhc-----------c-c---cccCCCCHHHHHHHHHHh---CCCC
Confidence            78999999999999999999999999999999865321           1 1   678999999998887633   3799


Q ss_pred             cEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcccccccc--
Q 019722          116 NLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQI--  193 (336)
Q Consensus       116 d~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~~~--  193 (336)
                      |+||||||+...     .+.|++++++|+.+++.++++++|.|++++     .++||++||..+...+....+.....  
T Consensus        64 d~lv~~Ag~~~~-----~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-----~g~iv~isS~~~~~~~~~~~~~~~~~~~  133 (257)
T 1fjh_A           64 DGLVLCAGLGPQ-----TKVLGNVVSVNYFGATELMDAFLPALKKGH-----QPAAVVISSVASAHLAFDKNPLALALEA  133 (257)
T ss_dssp             SEEEECCCCCTT-----CSSHHHHHHHHTHHHHHHHHHHHHHHHTSS-----SCEEEEECCGGGGSSCGGGCTTHHHHHH
T ss_pred             CEEEECCCCCCC-----cccHHHHHHHhhHHHHHHHHHHHHHHhhcC-----CcEEEEECChhhhccccccchhhhhhcc
Confidence            999999997542     234899999999999999999999998754     48999999987763211000000000  


Q ss_pred             ---------cCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCcc-chh-HHHHHH--HH
Q 019722          194 ---------SRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRER-EGF-ITDLVF--FL  260 (336)
Q Consensus       194 ---------~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~-~~~-~~~~~~--~~  260 (336)
                               .......++...|++||++++.+++.++.++++.|  |+||+|+||++.|++.+.. ... ......  ..
T Consensus       134 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~  211 (257)
T 1fjh_A          134 GEEAKARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAG--VRLNTIAPGATETPLLQAGLQDPRYGESIAKFVP  211 (257)
T ss_dssp             TCHHHHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTT--CEEEEEEECC---------------------CCC
T ss_pred             cchhhhhhhhhcccCCCCccHHHHHHHHHHHHHHHHHHHHhhcC--eEEEEEeeCCCCCccchhhccchhHHHHHHhccc
Confidence                     00001245778999999999999999999999887  9999999999999997753 111 111111  11


Q ss_pred             HHhhcCChHHHHHHHHHHHhcCccccCCceeeccCcccc
Q 019722          261 TSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAW  299 (336)
Q Consensus       261 ~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  299 (336)
                      +..+..+|+|+|..++++++ +...+++|+++..+|+..
T Consensus       212 ~~~~~~~~~dvA~~~~~l~~-~~~~~~tG~~~~vdgG~~  249 (257)
T 1fjh_A          212 PMGRRAEPSEMASVIAFLMS-PAASYVHGAQIVIDGGID  249 (257)
T ss_dssp             STTSCCCTHHHHHHHHHHTS-GGGTTCCSCEEEESTTHH
T ss_pred             ccCCCCCHHHHHHHHHHHhC-chhcCCcCCEEEECCCcc
Confidence            22356789999999999987 556789999999998743

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=99.97  E-value=1.4e-31  Score=284.66  Aligned_cols=240  Identities=18%  Similarity=0.117  Sum_probs=189.0

Q ss_pred             CCCCCCCEEEEeCCCCh-HHHHHHHHHHHCCCEEEEe-eCChHHHHHHHHHHHhhCC--CCceEEEeccCCCHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSG-IGAETARVLAKRGARLVLP-ARSLKAAEEAKARLASDCP--GSDIVVLPLDLSSLSSVRNFV  105 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~g-IG~aia~~L~~~G~~V~~~-~r~~~~~~~~~~~l~~~~~--~~~~~~~~~Dl~~~~~v~~~~  105 (336)
                      .++++||++|||||++| ||+++|+.|+++|++|+++ +|+.+++++..+++.+...  +.++.+++||++|.+++++++
T Consensus       670 ~m~l~gKvaLVTGASsGgIG~aIA~~La~~GA~Vvl~~~R~~~~l~~~~~eL~~~~~~~g~~v~~v~~DVsd~~sV~alv  749 (1887)
T 2uv8_A          670 GVTFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALI  749 (1887)
T ss_dssp             CBCCTTCEEEEESCCSSSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHH
T ss_pred             cCCCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCCHHHHHHHHHHHHHHhhcCCCeEEEEEecCCCHHHHHHHH
Confidence            45799999999999998 9999999999999999998 6888877777777654432  468999999999999999999


Q ss_pred             HHHHhc-----CC-CccEEEEcccCCCCC---CCCC--chhhhhHHHHHHhHHHHHHHHH--HHHHHHhhccCCCCCeEE
Q 019722          106 SQFHSL-----NL-PLNLLINNAGKFAHQ---HAIS--EDGIEMTFATNYLGHFLLTKLL--LKKMIETAKATGIQGRIV  172 (336)
Q Consensus       106 ~~~~~~-----~~-~id~lv~nAg~~~~~---~~~~--~~~~~~~~~vn~~~~~~l~~~~--~~~l~~~~~~~~~~grIV  172 (336)
                      +++.+.     +| +||+||||||+....   .+.+  .++|++++++|+.+++.+++++  +|.|.+++     .|+||
T Consensus       750 ~~i~~~~~~~G~G~~LDiLVNNAGi~~~~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~m~~~~-----~G~IV  824 (1887)
T 2uv8_A          750 EFIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRP-----AQVIL  824 (1887)
T ss_dssp             HHHHSCTTTTSCCCCCSEEEECCCCCCCSBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCCSCC-----EEEEE
T ss_pred             HHHHHhccccccCCCCeEEEECCCcCCCCCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhCC-----CCEEE
Confidence            999988     66 999999999976432   4556  7899999999999999999988  67775543     47999


Q ss_pred             EEcCCccccccCCcccccccccCCCCCCChhhHhHHHHHHHHHH-HHHHHHHHccCCCcEEEEEeeCCcee-CCCCCccc
Q 019722          173 NVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLANVLH-TKELAQRLKQMEANVTVNCVHPGIVR-TRLTRERE  250 (336)
Q Consensus       173 ~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l-~~~la~e~~~~g~~I~vn~v~PG~v~-T~~~~~~~  250 (336)
                      ++||..+..+                   +...|++||+++++| ++.++.++++.   |+||+|+||+|+ |+|.....
T Consensus       825 nISS~ag~~g-------------------g~~aYaASKAAL~~Lttr~lA~ela~~---IrVNaV~PG~V~tT~m~~~~~  882 (1887)
T 2uv8_A          825 PMSPNHGTFG-------------------GDGMYSESKLSLETLFNRWHSESWANQ---LTVCGAIIGWTRGTGLMSANN  882 (1887)
T ss_dssp             EECSCTTCSS-------------------CBTTHHHHHHHGGGHHHHHHHSSCTTT---EEEEEEEECCEECC-----CC
T ss_pred             EEcChHhccC-------------------CCchHHHHHHHHHHHHHHHHHHHhCCC---eEEEEEEecccccccccccch
Confidence            9999877643                   345799999999999 89999888764   999999999999 89876421


Q ss_pred             hhHHHHHHHHHHhhcCChHHHHHHHHHHHhcCccccCCceeeccC--ccc
Q 019722          251 GFITDLVFFLTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADC--NEA  298 (336)
Q Consensus       251 ~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~--~~~  298 (336)
                       .........+ .+..+|+++|..++|+++.+...+++|+.+.++  |+.
T Consensus       883 -~~~~~~~~~p-lr~~sPEEVA~avlfLaSd~~as~iTGq~I~VDVDGG~  930 (1887)
T 2uv8_A          883 -IIAEGIEKMG-VRTFSQKEMAFNLLGLLTPEVVELCQKSPVMADLNGGL  930 (1887)
T ss_dssp             -TTHHHHHTTS-CCCEEHHHHHHHHHGGGSHHHHHHHHHSCEEEEESCST
T ss_pred             -hHHHHHHhcC-CCCCCHHHHHHHHHHHhCCCccccccCcEEEEECCCCe
Confidence             1122222211 134589999999999997433678999988653  653

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=99.97  E-value=2e-30  Score=275.35  Aligned_cols=239  Identities=19%  Similarity=0.149  Sum_probs=188.6

Q ss_pred             CCCCCCCEEEEeCCCCh-HHHHHHHHHHHCCCEEEEee-CChHHHHHHHHHHHhhCC--CCceEEEeccCCCHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSG-IGAETARVLAKRGARLVLPA-RSLKAAEEAKARLASDCP--GSDIVVLPLDLSSLSSVRNFV  105 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~g-IG~aia~~L~~~G~~V~~~~-r~~~~~~~~~~~l~~~~~--~~~~~~~~~Dl~~~~~v~~~~  105 (336)
                      .++++||++|||||++| ||+++|+.|+++|++|++++ |+.+.+.+..+++.....  +.++.++.||++|.+++++++
T Consensus       647 ~m~L~gKvaLVTGASgGgIG~aIAr~LA~~GA~VVl~~~R~~~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~esV~alv  726 (1878)
T 2uv9_A          647 GLTFQGKHALMTGAGAGSIGAEVLQGLLSGGAKVIVTTSRFSRQVTEYYQGIYARCGARGSQLVVVPFNQGSKQDVEALV  726 (1878)
T ss_dssp             CBCCTTCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHH
T ss_pred             CCCCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCChHHHHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHH
Confidence            45799999999999999 99999999999999999995 767776666666644321  568999999999999999999


Q ss_pred             HHHHhc---CC-CccEEEEcccCCCCC---CCCC--chhhhhHHHHHHhHHHHHHHH--HHHHHHHhhccCCCCCeEEEE
Q 019722          106 SQFHSL---NL-PLNLLINNAGKFAHQ---HAIS--EDGIEMTFATNYLGHFLLTKL--LLKKMIETAKATGIQGRIVNV  174 (336)
Q Consensus       106 ~~~~~~---~~-~id~lv~nAg~~~~~---~~~~--~~~~~~~~~vn~~~~~~l~~~--~~~~l~~~~~~~~~~grIV~v  174 (336)
                      +++.+.   +| +||+||||||+....   .+.+  .++|++++++|+.+++.+++.  ++|.|.+++     .|+||++
T Consensus       727 ~~i~~~~~~~G~~IDiLVnNAGi~~~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M~~~~-----~G~IVnI  801 (1878)
T 2uv9_A          727 NYIYDTKNGLGWDLDYVVPFAAIPENGREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERGYETRP-----AQVILPL  801 (1878)
T ss_dssp             HHHHCSSSSCCCCCSEEEECCCCCCTTCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCSCC-----EEECCEE
T ss_pred             HHHHHhhcccCCCCcEEEeCcccccCCCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhCC-----CCEEEEE
Confidence            999988   88 999999999976432   5566  789999999999999999987  667775543     3799999


Q ss_pred             cCCccccccCCcccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHH-HccCCCcEEEEEeeCCcee-CCCCCccchh
Q 019722          175 SSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQR-LKQMEANVTVNCVHPGIVR-TRLTREREGF  252 (336)
Q Consensus       175 sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e-~~~~g~~I~vn~v~PG~v~-T~~~~~~~~~  252 (336)
                      ||.++..+                   +...|++||+++++|++.++.+ +++ +  |+||+|+||+++ |+|.... ..
T Consensus       802 SS~ag~~g-------------------g~~aYaASKAAL~aLt~~laAeEla~-~--IrVNaVaPG~V~gT~m~~~~-~~  858 (1878)
T 2uv9_A          802 SPNHGTFG-------------------NDGLYSESKLALETLFNRWYSESWGN-Y--LTICGAVIGWTRGTGLMSAN-NL  858 (1878)
T ss_dssp             CSCSSSSS-------------------CCSSHHHHHHHHTTHHHHHHHSTTTT-T--EEEEEEEECCBCCTTSCSHH-HH
T ss_pred             cchhhccC-------------------CchHHHHHHHHHHHHHHHHHHHHcCC-C--eEEEEEEecceecCcccccc-hh
Confidence            99877643                   2457999999999999877665 554 3  999999999999 9997641 11


Q ss_pred             HHHHHHHHHHhhcCChHHHHHHHHHHHhcCcc-ccCCceeecc--Cccc
Q 019722          253 ITDLVFFLTSKLLKTIPQGAATTCYVAIHPRL-VNVSGKYFAD--CNEA  298 (336)
Q Consensus       253 ~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~-~~~~G~~~~~--~~~~  298 (336)
                      ........+ .+..+|++++..++|+++ +.. .+++|+.+..  +|+.
T Consensus       859 ~~~~~~~~p-lr~~sPeEVA~avlfLaS-d~a~s~iTGq~I~VDVDGG~  905 (1878)
T 2uv9_A          859 VAEGVEKLG-VRTFSQQEMAFNLLGLMA-PAIVNLCQSDPVFADLNGGL  905 (1878)
T ss_dssp             THHHHHTTT-CCCBCHHHHHHHHHHHHS-HHHHHHHTTSCEEEEESCSG
T ss_pred             hHHHHHhcC-CCCCCHHHHHHHHHHHhC-CcccccccCcEEEEEcCCCc
Confidence            111111111 134589999999999987 554 7899988865  3553

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=99.97  E-value=4.8e-32  Score=279.77  Aligned_cols=241  Identities=18%  Similarity=0.116  Sum_probs=190.5

Q ss_pred             CCCCCCCEEEEeCCCCh-HHHHHHHHHHHCCCEEEEe-eCChHHHHHHHHHHHhhCC--CCceEEEeccCCCHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSG-IGAETARVLAKRGARLVLP-ARSLKAAEEAKARLASDCP--GSDIVVLPLDLSSLSSVRNFV  105 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~g-IG~aia~~L~~~G~~V~~~-~r~~~~~~~~~~~l~~~~~--~~~~~~~~~Dl~~~~~v~~~~  105 (336)
                      .++++||++|||||++| ||+++|++|+++|++|+++ +|+.+++++..+++.+...  +.++.++++|+++.+++++++
T Consensus       471 ~msL~GKvALVTGASgGGIGrAIAr~LA~~GA~VVL~~~R~~e~lee~a~eL~ael~a~Ga~V~vV~~DVTD~esVeaLV  550 (1688)
T 2pff_A          471 XVTFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALI  550 (1688)
T ss_dssp             CCCCCSCCEEECSCSSSSTHHHHHHHHHHHTCEEEEEESSCSTTTTTHHHHTTTTTCCTTCEEEEEECCSSSTTHHHHHH
T ss_pred             ccccCCCEEEEECCChHHHHHHHHHHHHHCcCEEEEEeCCCHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCCHHHHHHHH
Confidence            45789999999999998 9999999999999999998 6777766666666644432  457999999999999999999


Q ss_pred             HHHHhc-----CC-CccEEEEcccCCCCC---CCCC--chhhhhHHHHHHhHHHHHHHHH--HHHHHHhhccCCCCCeEE
Q 019722          106 SQFHSL-----NL-PLNLLINNAGKFAHQ---HAIS--EDGIEMTFATNYLGHFLLTKLL--LKKMIETAKATGIQGRIV  172 (336)
Q Consensus       106 ~~~~~~-----~~-~id~lv~nAg~~~~~---~~~~--~~~~~~~~~vn~~~~~~l~~~~--~~~l~~~~~~~~~~grIV  172 (336)
                      +++.+.     ++ ++|+||||||+....   .+.+  .++|++++++|+.+++.+++++  .|.|.+++     .|+||
T Consensus       551 e~I~e~~~~~GfG~~IDILVNNAGI~~~g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M~krg-----gGrIV  625 (1688)
T 2pff_A          551 EFIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRP-----AQVIL  625 (1688)
T ss_dssp             HHHHSCTTSSSCCCCCCEEECCCCCCCCSBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHHHHTCTTSC-----EEECC
T ss_pred             HHHHHhccccccCCCCeEEEECCCcCCCCCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHhChHHHhCC-----CCEEE
Confidence            999988     77 999999999976432   4556  7899999999999999999998  77776543     37999


Q ss_pred             EEcCCccccccCCcccccccccCCCCCCChhhHhHHHHHHHHHH-HHHHHHHHccCCCcEEEEEeeCCcee-CCCCCccc
Q 019722          173 NVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLANVLH-TKELAQRLKQMEANVTVNCVHPGIVR-TRLTRERE  250 (336)
Q Consensus       173 ~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l-~~~la~e~~~~g~~I~vn~v~PG~v~-T~~~~~~~  250 (336)
                      ++||.++..+                   +...|++||+++++| ++.++.++++.   |+||+|+||+|+ |+|.....
T Consensus       626 nISSiAG~~G-------------------g~saYaASKAAL~aLttrsLAeEla~~---IRVNaVaPG~V~TT~M~~~~e  683 (1688)
T 2pff_A          626 PMSPNHGTFG-------------------GDGMYSESKLSLETLFNRWHSESWANQ---LTVCGAIIGWTRGTGLMSANN  683 (1688)
T ss_dssp             CCCSCTTTSS-------------------CBTTHHHHHHHHTHHHHHTTTSSCTTT---EECCCCCCCCCCCCSSSCTTT
T ss_pred             EEEChHhccC-------------------CchHHHHHHHHHHHHHHHHHHHHcCCC---eEEEEEEECcCcCCcccCCch
Confidence            9999877643                   345799999999999 77788777653   999999999999 78865311


Q ss_pred             hhHHHHHHHHHHhhcCChHHHHHHHHHHHhcCccccCCceeeccC--cccc
Q 019722          251 GFITDLVFFLTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADC--NEAW  299 (336)
Q Consensus       251 ~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~--~~~~  299 (336)
                       .........+ .+..+|+|+|..++|+++.+.+.+++|+.+..+  |+..
T Consensus       684 -~~~~~l~~ip-lR~~sPEEVA~aIlFLaSd~sAs~ITGq~I~VDVDGG~~  732 (1688)
T 2pff_A          684 -IIAEGIEKMG-VRTFSQKEMAFNLLGLLTPEVVELCQKSPVMADLNGGLQ  732 (1688)
T ss_dssp             -TCSTTTSSSS-CCCCCCCTTHHHHHHHTSTTHHHHHTTSCCCCCCSCSGG
T ss_pred             -HHHHHHHhCC-CCCCCHHHHHHHHHHHhCCCccccccCcEEEEEcCCCee
Confidence             0000011111 134589999999999998443688999988764  6533

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=99.97  E-value=9.2e-30  Score=218.63  Aligned_cols=198  Identities=23%  Similarity=0.202  Sum_probs=162.7

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCCCc
Q 019722           36 VTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLPL  115 (336)
Q Consensus        36 k~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i  115 (336)
                      |++|||||++|||++++++|+++  +|++++|++++.++..+++.     .  .++++|++|++++++++++    ++++
T Consensus         1 k~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~~~~~~~~~~~~-----~--~~~~~D~~~~~~~~~~~~~----~~~i   67 (207)
T 2yut_A            1 MRVLITGATGGLGGAFARALKGH--DLLLSGRRAGALAELAREVG-----A--RALPADLADELEAKALLEE----AGPL   67 (207)
T ss_dssp             CEEEEETTTSHHHHHHHHHTTTS--EEEEECSCHHHHHHHHHHHT-----C--EECCCCTTSHHHHHHHHHH----HCSE
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhC--CEEEEECCHHHHHHHHHhcc-----C--cEEEeeCCCHHHHHHHHHh----cCCC
Confidence            68999999999999999999999  99999999888776665542     2  8889999999999999887    5789


Q ss_pred             cEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcccccccc
Q 019722          116 NLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQI  193 (336)
Q Consensus       116 d~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~~~  193 (336)
                      |+||||||.....  .+.+.+++++.+++|+.+++.+++++    .+.+     .++||++||..+..+           
T Consensus        68 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~-----~~~iv~~sS~~~~~~-----------  127 (207)
T 2yut_A           68 DLLVHAVGKAGRASVREAGRDLVEEMLAAHLLTAAFVLKHA----RFQK-----GARAVFFGAYPRYVQ-----------  127 (207)
T ss_dssp             EEEEECCCCCCCBCSCC---CHHHHHHHHHHHHHHHHHHHC----CEEE-----EEEEEEECCCHHHHS-----------
T ss_pred             CEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHH----HhcC-----CcEEEEEcChhhccC-----------
Confidence            9999999976443  45678899999999999999999998    2222     379999999877654           


Q ss_pred             cCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHHHHHHHHhhcCChHHHHH
Q 019722          194 SRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSKLLKTIPQGAA  273 (336)
Q Consensus       194 ~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~  273 (336)
                            .++...|+++|++++.+++.++.++++.|  |++++|+||++.|++......         +......++|+|.
T Consensus       128 ------~~~~~~Y~~sK~a~~~~~~~~~~~~~~~g--i~v~~v~pg~v~t~~~~~~~~---------~~~~~~~~~dva~  190 (207)
T 2yut_A          128 ------VPGFAAYAAAKGALEAYLEAARKELLREG--VHLVLVRLPAVATGLWAPLGG---------PPKGALSPEEAAR  190 (207)
T ss_dssp             ------STTBHHHHHHHHHHHHHHHHHHHHHHTTT--CEEEEECCCCBCSGGGGGGTS---------CCTTCBCHHHHHH
T ss_pred             ------CCCcchHHHHHHHHHHHHHHHHHHHhhhC--CEEEEEecCcccCCCccccCC---------CCCCCCCHHHHHH
Confidence                  56677899999999999999999998877  999999999999998443111         1144678999999


Q ss_pred             HHHHHHhcCc
Q 019722          274 TTCYVAIHPR  283 (336)
Q Consensus       274 ~~~~l~~~~~  283 (336)
                      .+++++..+.
T Consensus       191 ~~~~~~~~~~  200 (207)
T 2yut_A          191 KVLEGLFREP  200 (207)
T ss_dssp             HHHHHHC--C
T ss_pred             HHHHHHhCCC
Confidence            9999997554

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=99.97  E-value=2.3e-30  Score=229.15  Aligned_cols=233  Identities=20%  Similarity=0.135  Sum_probs=174.6

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCCCc
Q 019722           36 VTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLPL  115 (336)
Q Consensus        36 k~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i  115 (336)
                      |++|||||+||||++++++|+++|++|++++|+.++.+           .    .+++|++++++++++++++   .+++
T Consensus         2 k~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~-----------~----~~~~D~~~~~~~~~~~~~~---~~~~   63 (255)
T 2dkn_A            2 SVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIE-----------A----DLSTPGGRETAVAAVLDRC---GGVL   63 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEE-----------C----CTTSHHHHHHHHHHHHHHH---TTCC
T ss_pred             cEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHcc-----------c----cccCCcccHHHHHHHHHHc---CCCc
Confidence            68999999999999999999999999999999865321           1    1678999999999988865   3689


Q ss_pred             cEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcccccccc--
Q 019722          116 NLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQI--  193 (336)
Q Consensus       116 d~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~~~--  193 (336)
                      |+||||||....     .+++++.+++|+.+++.+++++.+.|++.+     .++||++||..+..+........+..  
T Consensus        64 d~vi~~Ag~~~~-----~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-----~~~iv~~sS~~~~~~~~~~~~~~~~~~~  133 (255)
T 2dkn_A           64 DGLVCCAGVGVT-----AANSGLVVAVNYFGVSALLDGLAEALSRGQ-----QPAAVIVGSIAATQPGAAELPMVEAMLA  133 (255)
T ss_dssp             SEEEECCCCCTT-----SSCHHHHHHHHTHHHHHHHHHHHHHHHTSS-----SCEEEEECCGGGGSTTGGGCHHHHHHHH
T ss_pred             cEEEECCCCCCc-----chhHHHHHHHHhHHHHHHHHHHHHHhhhcC-----CceEEEEeccccccccccccchhhhhcc
Confidence            999999997542     345899999999999999999999998754     47999999987664321000000000  


Q ss_pred             cCC-------CCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCcc-ch-hHHHHHHHH--HH
Q 019722          194 SRN-------KSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRER-EG-FITDLVFFL--TS  262 (336)
Q Consensus       194 ~~~-------~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~-~~-~~~~~~~~~--~~  262 (336)
                      .+.       ....+....|+.||++++.+++.++.++.+.|  |++++|+||++.|++.... .. .........  +.
T Consensus       134 ~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~g--i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~  211 (255)
T 2dkn_A          134 GDEARAIELAEQQGQTHLAYAGSKYAVTCLARRNVVDWAGRG--VRLNVVAPGAVETPLLQASKADPRYGESTRRFVAPL  211 (255)
T ss_dssp             TCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHTHHHHHHTT--CEEEEEEECCBCSHHHHHHHHCTTTHHHHHSCCCTT
T ss_pred             cchhhhhhhccccCCcchhHHHHHHHHHHHHHHHHHHHhhcC--cEEEEEcCCcccchhhhhcccchhhHHHHHHHHHHh
Confidence            000       00014677899999999999999999998877  9999999999999976542 11 111111111  22


Q ss_pred             hhcCChHHHHHHHHHHHhcCccccCCceeeccCcccc
Q 019722          263 KLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAW  299 (336)
Q Consensus       263 ~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  299 (336)
                      .....++|+|.++++++. +...+++|+.+..+++..
T Consensus       212 ~~~~~~~dva~~~~~l~~-~~~~~~~G~~~~v~gg~~  247 (255)
T 2dkn_A          212 GRGSEPREVAEAIAFLLG-PQASFIHGSVLFVDGGMD  247 (255)
T ss_dssp             SSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTHH
T ss_pred             cCCCCHHHHHHHHHHHhC-CCcccceeeEEEecCCeE
Confidence            345789999999999997 445678999998888743

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=99.97  E-value=2.3e-30  Score=221.81  Aligned_cols=198  Identities=13%  Similarity=0.196  Sum_probs=163.9

Q ss_pred             CC-EEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCC
Q 019722           35 SV-TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNL  113 (336)
Q Consensus        35 gk-~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  113 (336)
                      || ++|||||++|||++++++|+ +|++|++++|+.+                   ++++|++++++++++++++    +
T Consensus         2 ~kM~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~-------------------~~~~D~~~~~~~~~~~~~~----~   57 (202)
T 3d7l_A            2 NAMKILLIGASGTLGSAVKERLE-KKAEVITAGRHSG-------------------DVTVDITNIDSIKKMYEQV----G   57 (202)
T ss_dssp             CSCEEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS-------------------SEECCTTCHHHHHHHHHHH----C
T ss_pred             CCcEEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc-------------------ceeeecCCHHHHHHHHHHh----C
Confidence            45 79999999999999999999 9999999999854                   4789999999999998875    6


Q ss_pred             CccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcccccc
Q 019722          114 PLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLG  191 (336)
Q Consensus       114 ~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~  191 (336)
                      ++|+||||||.....  .+.+.++|++.+++|+.+++.+++++.+.|.+       +++||++||..+..+         
T Consensus        58 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-------~~~iv~~sS~~~~~~---------  121 (202)
T 3d7l_A           58 KVDAIVSATGSATFSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLND-------KGSFTLTTGIMMEDP---------  121 (202)
T ss_dssp             CEEEEEECCCCCCCCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEE-------EEEEEEECCGGGTSC---------
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhcc-------CCEEEEEcchhhcCC---------
Confidence            899999999976432  55678899999999999999999999998853       279999999876554         


Q ss_pred             cccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHHHHHHHHhhcCChHHH
Q 019722          192 QISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSKLLKTIPQG  271 (336)
Q Consensus       192 ~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~  271 (336)
                              .+....|+++|++++.+++.++.|+ +.|  |++|+|+||++.|++....        ...+......++|+
T Consensus       122 --------~~~~~~Y~~sK~~~~~~~~~~~~e~-~~g--i~v~~v~pg~v~~~~~~~~--------~~~~~~~~~~~~dv  182 (202)
T 3d7l_A          122 --------IVQGASAAMANGAVTAFAKSAAIEM-PRG--IRINTVSPNVLEESWDKLE--------PFFEGFLPVPAAKV  182 (202)
T ss_dssp             --------CTTCHHHHHHHHHHHHHHHHHTTSC-STT--CEEEEEEECCBGGGHHHHG--------GGSTTCCCBCHHHH
T ss_pred             --------CCccHHHHHHHHHHHHHHHHHHHHc-cCC--eEEEEEecCccCCchhhhh--------hhccccCCCCHHHH
Confidence                    5667789999999999999999998 656  9999999999999974311        01122345688999


Q ss_pred             HHHHHHHHhcCccccCCceeeccC
Q 019722          272 AATTCYVAIHPRLVNVSGKYFADC  295 (336)
Q Consensus       272 a~~~~~l~~~~~~~~~~G~~~~~~  295 (336)
                      |..+++++.    .+++|+.|..+
T Consensus       183 a~~~~~~~~----~~~~G~~~~vd  202 (202)
T 3d7l_A          183 ARAFEKSVF----GAQTGESYQVY  202 (202)
T ss_dssp             HHHHHHHHH----SCCCSCEEEEC
T ss_pred             HHHHHHhhh----ccccCceEecC
Confidence            999888773    45789877653

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=99.96  E-value=4.2e-29  Score=243.09  Aligned_cols=217  Identities=19%  Similarity=0.125  Sum_probs=175.5

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCE-EEEe-eCCh-------------HHHHHHHHHHHhhCCCCceEEEeccCCCH
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGAR-LVLP-ARSL-------------KAAEEAKARLASDCPGSDIVVLPLDLSSL   98 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~~-V~~~-~r~~-------------~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~   98 (336)
                      .++++|||||++|||+++++.|+++|++ |+++ +|+.             +.+++..++++..  +.++.++.||++|.
T Consensus       250 ~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~--g~~v~~~~~Dvtd~  327 (525)
T 3qp9_A          250 ADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADL--GATATVVTCDLTDA  327 (525)
T ss_dssp             TTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHH--TCEEEEEECCTTSH
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhc--CCEEEEEECCCCCH
Confidence            6899999999999999999999999996 7788 8983             4556677777765  67899999999999


Q ss_pred             HHHHHHHHHHHhcCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcC
Q 019722           99 SSVRNFVSQFHSLNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSS  176 (336)
Q Consensus        99 ~~v~~~~~~~~~~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS  176 (336)
                      +++.++++++. .+++||+||||||+....  .+.+.+++++++++|+.|.+.+.+++.+.+++++.    .++||++||
T Consensus       328 ~~v~~~~~~i~-~~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~----~~~iV~~SS  402 (525)
T 3qp9_A          328 EAAARLLAGVS-DAHPLSAVLHLPPTVDSEPLAATDADALARVVTAKATAALHLDRLLREAAAAGGR----PPVLVLFSS  402 (525)
T ss_dssp             HHHHHHHHTSC-TTSCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----C----CCEEEEEEE
T ss_pred             HHHHHHHHHHH-hcCCCcEEEECCcCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCC----CCEEEEECC
Confidence            99999999988 689999999999987653  67788999999999999999999999999876531    379999999


Q ss_pred             CccccccCCcccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHH
Q 019722          177 SIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDL  256 (336)
Q Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~  256 (336)
                      .++..+                 .+++..|+++|++++.|+    .++...|  |++++|+||++.|+|.....  ....
T Consensus       403 ~a~~~g-----------------~~g~~~YaaaKa~l~~lA----~~~~~~g--i~v~sI~pG~~~tgm~~~~~--~~~~  457 (525)
T 3qp9_A          403 VAAIWG-----------------GAGQGAYAAGTAFLDALA----GQHRADG--PTVTSVAWSPWEGSRVTEGA--TGER  457 (525)
T ss_dssp             GGGTTC-----------------CTTCHHHHHHHHHHHHHH----TSCCSSC--CEEEEEEECCBTTSGGGSSH--HHHH
T ss_pred             HHHcCC-----------------CCCCHHHHHHHHHHHHHH----HHHHhCC--CCEEEEECCccccccccchh--hHHH
Confidence            998877                 677889999999999875    4556666  99999999999999985421  1111


Q ss_pred             HHHHHHhhcCChHHHHHHHHHHHhcCc
Q 019722          257 VFFLTSKLLKTIPQGAATTCYVAIHPR  283 (336)
Q Consensus       257 ~~~~~~~~~~~~~~~a~~~~~l~~~~~  283 (336)
                      .. .......+|++++..+.+++..+.
T Consensus       458 ~~-~~g~~~l~pee~a~~l~~~l~~~~  483 (525)
T 3qp9_A          458 LR-RLGLRPLAPATALTALDTALGHGD  483 (525)
T ss_dssp             HH-HTTBCCBCHHHHHHHHHHHHHHTC
T ss_pred             HH-hcCCCCCCHHHHHHHHHHHHhCCC
Confidence            11 111223688999999999997543

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=99.95  E-value=7.2e-28  Score=267.34  Aligned_cols=240  Identities=17%  Similarity=0.094  Sum_probs=176.9

Q ss_pred             CCCCCCEEEEeCCCCh-HHHHHHHHHHHCCCEEEEeeCChHH-----HHHHHHHHHhhCCCCceEEEeccCCCHHHHHHH
Q 019722           31 PNLSSVTAIITGATSG-IGAETARVLAKRGARLVLPARSLKA-----AEEAKARLASDCPGSDIVVLPLDLSSLSSVRNF  104 (336)
Q Consensus        31 ~~l~gk~~lItGgs~g-IG~aia~~L~~~G~~V~~~~r~~~~-----~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~  104 (336)
                      ..|+||+||||||++| ||+++|+.|+++|++|++++|+.+.     ++++.+++...  +.++.++++|++++++++++
T Consensus      2132 ~~l~gKvaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~~~~~~l~~~l~~~--G~~~~~v~~Dvtd~~~v~~l 2209 (3089)
T 3zen_D         2132 XXXXDEVAVVTGASKGSIAASVVGQLLDGGATVIATTSRLDDDRLAFYKQLYRDHARF--DATLWVVPANMASYSDIDKL 2209 (3089)
T ss_dssp             CCCCCCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHHHHHHHHHHHHCCT--TCEEEEEECCTTCHHHHHHH
T ss_pred             ccCCCCEEEEeCCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhhHHHHHHHHHHhhc--CCeEEEEEecCCCHHHHHHH
Confidence            4599999999999999 9999999999999999999998766     45555555433  56789999999999999999


Q ss_pred             HHHHHh----cCCCccEEEEcccCC----C---CCCCCCchhhhhH----HHHHHhHHHHHHHHHHHHHHHhhccCCCCC
Q 019722          105 VSQFHS----LNLPLNLLINNAGKF----A---HQHAISEDGIEMT----FATNYLGHFLLTKLLLKKMIETAKATGIQG  169 (336)
Q Consensus       105 ~~~~~~----~~~~id~lv~nAg~~----~---~~~~~~~~~~~~~----~~vn~~~~~~l~~~~~~~l~~~~~~~~~~g  169 (336)
                      ++++.+    .+|++|+||||||+.    .   ...+.+.++|+..    +++|+.+.+.+++.+.+.|.+.... ...+
T Consensus      2210 v~~i~~~~~~~fG~IDILVNNAGi~d~~~~~a~~~~~~~~e~~~~~~e~~~~vnl~~~~~l~~~~~~~m~~~~~g-~~~~ 2288 (3089)
T 3zen_D         2210 VEWVGTEQTESLGPQSIHLKDAQTPTLLFPFAAPRVAGDMSEVGSRAEMEMKVLLWAVQRLISGLSKIGAERDIA-SRLH 2288 (3089)
T ss_dssp             HHHHTSCCEEEESSSEEEECCCCCCSEEEECCCCCCCCTTSCTTSHHHHHHHHHTHHHHHHHHHHHHHHHHTTCC-CCEE
T ss_pred             HHHHHhhhhhhcCCCCEEEECCCcccccCcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC-ceeE
Confidence            999988    789999999999972    1   1133355566655    9999999999999999999875421 1112


Q ss_pred             eEEEEcCCccccccCCcccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHH--HccCCCcEEEEEeeCCcee-CCCC
Q 019722          170 RIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQR--LKQMEANVTVNCVHPGIVR-TRLT  246 (336)
Q Consensus       170 rIV~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e--~~~~g~~I~vn~v~PG~v~-T~~~  246 (336)
                      .|+++++..+.                   .++...|++||+|+++|+++|+.|  +++ +  |+||+|+||+|+ |++.
T Consensus      2289 ii~~~ss~~g~-------------------~g~~~aYsASKaAl~~LtrslA~E~~~a~-~--IrVn~v~PG~v~tT~l~ 2346 (3089)
T 3zen_D         2289 VVLPGSPNRGM-------------------FGGDGAYGEAKSALDALENRWSAEKSWAE-R--VSLAHALIGWTKGTGLM 2346 (3089)
T ss_dssp             EEEEECSSTTS-------------------CSSCSSHHHHGGGHHHHHHHHHHCSTTTT-T--EEEEEEECCCEECSTTT
T ss_pred             EEEECCccccc-------------------CCCchHHHHHHHHHHHHHHHHHhccccCC-C--eEEEEEeecccCCCccc
Confidence            23333332221                   233447999999999999999999  653 4  999999999999 7776


Q ss_pred             CccchhHHHHHHHHHHhhcCChHHHHHHHHHHHhcCcccc-CCcee--eccCccc
Q 019722          247 REREGFITDLVFFLTSKLLKTIPQGAATTCYVAIHPRLVN-VSGKY--FADCNEA  298 (336)
Q Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~-~~G~~--~~~~~~~  298 (336)
                      ..... ......... .+..+|+|+|..++||++ +.+.+ .+|+.  ++.+|+.
T Consensus      2347 ~~~~~-~~~~~~~~~-~r~~~PeEIA~avlfLaS-~~a~~~~~~~p~~vdl~GG~ 2398 (3089)
T 3zen_D         2347 GQNDA-IVSAVEEAG-VTTYTTDEMAAMLLDLCT-VETKVAAAGAPVKVDLTGGL 2398 (3089)
T ss_dssp             TTTTT-THHHHGGGS-CBCEEHHHHHHHHHHTTS-HHHHHHHHHSCEEEECSBSC
T ss_pred             ccchh-HHHHHHhcC-CCCCCHHHHHHHHHHHhC-hhhhhHhcCCeEEEEcCCCc
Confidence            54221 111111111 233479999999999997 55444 45553  3444664

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=99.95  E-value=3.8e-27  Score=227.04  Aligned_cols=212  Identities=18%  Similarity=0.183  Sum_probs=167.8

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCCh---HHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHh
Q 019722           35 SVTAIITGATSGIGAETARVLAKRGA-RLVLPARSL---KAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHS  110 (336)
Q Consensus        35 gk~~lItGgs~gIG~aia~~L~~~G~-~V~~~~r~~---~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  110 (336)
                      ++++|||||++|||+++++.|+++|+ +|++++|+.   +..+++.++++..  +.++.++.||++|.+++.++++++.+
T Consensus       239 ~~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~--g~~v~~~~~Dvtd~~~v~~~~~~i~~  316 (496)
T 3mje_A          239 HGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQL--GVRVTIAACDAADREALAALLAELPE  316 (496)
T ss_dssp             CSEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHT--TCEEEEEECCTTCHHHHHHHHHTCCT
T ss_pred             CCEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhc--CCeEEEEEccCCCHHHHHHHHHHHHH
Confidence            59999999999999999999999999 899999974   3356666777665  67999999999999999999999876


Q ss_pred             cCCCccEEEEcccCC-CC--CCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcc
Q 019722          111 LNLPLNLLINNAGKF-AH--QHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMI  187 (336)
Q Consensus       111 ~~~~id~lv~nAg~~-~~--~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~  187 (336)
                      . +++|+||||||+. ..  ..+.+.++|++++++|+.+.+.+.+++.+..         .++||++||.++..+     
T Consensus       317 ~-g~ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~~---------~~~iV~~SS~a~~~g-----  381 (496)
T 3mje_A          317 D-APLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTADLD---------LDAFVLFSSGAAVWG-----  381 (496)
T ss_dssp             T-SCEEEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTSC---------CSEEEEEEEHHHHTT-----
T ss_pred             h-CCCeEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhccC---------CCEEEEEeChHhcCC-----
Confidence            6 7899999999987 33  2678899999999999999999998876642         479999999988877     


Q ss_pred             cccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHHHHHHHHhhcCC
Q 019722          188 RYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSKLLKT  267 (336)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~  267 (336)
                                  .+++..|+++|++++.|++.+    ...|  |++|+|+||++.+..+.........+ .. ......+
T Consensus       382 ------------~~g~~~YaAaKa~ldala~~~----~~~G--i~v~sV~pG~w~~~gm~~~~~~~~~l-~~-~g~~~l~  441 (496)
T 3mje_A          382 ------------SGGQPGYAAANAYLDALAEHR----RSLG--LTASSVAWGTWGEVGMATDPEVHDRL-VR-QGVLAME  441 (496)
T ss_dssp             ------------CTTCHHHHHHHHHHHHHHHHH----HHTT--CCCEEEEECEESSSCC------CHHH-HH-TTEEEEC
T ss_pred             ------------CCCcHHHHHHHHHHHHHHHHH----HhcC--CeEEEEECCcccCCccccChHHHHHH-Hh-cCCCCCC
Confidence                        677889999999999888754    4456  99999999999765443321111111 11 1122358


Q ss_pred             hHHHHHHHHHHHhcCc
Q 019722          268 IPQGAATTCYVAIHPR  283 (336)
Q Consensus       268 ~~~~a~~~~~l~~~~~  283 (336)
                      |++++..+.+++..+.
T Consensus       442 pe~~~~~l~~~l~~~~  457 (496)
T 3mje_A          442 PEHALGALDQMLENDD  457 (496)
T ss_dssp             HHHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHHcCCC
Confidence            8999999998887544

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=99.94  E-value=3e-27  Score=240.21  Aligned_cols=213  Identities=20%  Similarity=0.211  Sum_probs=173.5

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHH-HCCC-EEEEeeCC---hHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHH
Q 019722           34 SSVTAIITGATSGIGAETARVLA-KRGA-RLVLPARS---LKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQF  108 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~-~~G~-~V~~~~r~---~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~  108 (336)
                      .+|++|||||++|||+++++.|+ ++|+ +|++++|+   .+.+++..++++..  +.++.+++||++|.++++++++++
T Consensus       529 ~~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~--G~~v~~~~~Dvsd~~~v~~~~~~~  606 (795)
T 3slk_A          529 AAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAY--GAEVSLQACDVADRETLAKVLASI  606 (795)
T ss_dssp             TTSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHHT--TCEEEEEECCTTCHHHHHHHHHTS
T ss_pred             cccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHhc--CCcEEEEEeecCCHHHHHHHHHHH
Confidence            68999999999999999999999 7999 69999999   44567777777765  789999999999999999999998


Q ss_pred             HhcCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCc
Q 019722          109 HSLNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDM  186 (336)
Q Consensus       109 ~~~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~  186 (336)
                      .+.+ +||+||||||+....  .+++.++|++.+++|+.|++++.+++.|.|           +||++||.++..+    
T Consensus       607 ~~~~-~id~lVnnAGv~~~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~~~l-----------~iV~~SS~ag~~g----  670 (795)
T 3slk_A          607 PDEH-PLTAVVHAAGVLDDGVSESLTVERLDQVLRPKVDGARNLLELIDPDV-----------ALVLFSSVSGVLG----  670 (795)
T ss_dssp             CTTS-CEEEEEECCCCCCCCCGGGCCHHHHHHHHCCCCCHHHHHHHHSCTTS-----------EEEEEEETHHHHT----
T ss_pred             HHhC-CCEEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHhhCC-----------EEEEEccHHhcCC----
Confidence            7776 999999999987653  678999999999999999999999987654           7999999999887    


Q ss_pred             ccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHHHHHHH--Hhh
Q 019722          187 IRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLT--SKL  264 (336)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~--~~~  264 (336)
                                   .+++..|+++|+    |+++|++++...|  |++|+|+||++.|.+......  ......+.  ...
T Consensus       671 -------------~~g~~~YaAaka----~~~alA~~~~~~G--i~v~sI~pG~v~t~g~~~~~~--~~~~~~~~~~g~~  729 (795)
T 3slk_A          671 -------------SGGQGNYAAANS----FLDALAQQRQSRG--LPTRSLAWGPWAEHGMASTLR--EAEQDRLARSGLL  729 (795)
T ss_dssp             -------------CSSCHHHHHHHH----HHHHHHHHHHHTT--CCEEEEEECCCSCCCHHHHHH--HHHHHHHHHTTBC
T ss_pred             -------------CCCCHHHHHHHH----HHHHHHHHHHHcC--CeEEEEECCeECcchhhcccc--HHHHHHHHhcCCC
Confidence                         778899999995    6667777777877  999999999999886443211  11111111  123


Q ss_pred             cCChHHHHHHHHHHHhcCccc
Q 019722          265 LKTIPQGAATTCYVAIHPRLV  285 (336)
Q Consensus       265 ~~~~~~~a~~~~~l~~~~~~~  285 (336)
                      ..++++....+..++.++...
T Consensus       730 ~l~~~e~~~~~~~~l~~~~~~  750 (795)
T 3slk_A          730 PISTEEGLSQFDAACGGAHTV  750 (795)
T ss_dssp             CCCHHHHHHHHHHHHTSSCSS
T ss_pred             CCCHHHHHHHHHHHHhCCCcE
Confidence            356788888888888766543

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=99.93  E-value=3e-25  Score=194.56  Aligned_cols=214  Identities=15%  Similarity=0.102  Sum_probs=152.4

Q ss_pred             cccccCCCCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCce-EEEeccCCCHHHH
Q 019722           23 AEQVTDGCPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDI-VVLPLDLSSLSSV  101 (336)
Q Consensus        23 ~~~~~~~~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~-~~~~~Dl~~~~~v  101 (336)
                      +.+++....+++||++|||||+|+||++++++|+++|++|++++|++++.++...        .++ .++++|++     
T Consensus         9 ~~~~~~~~~~l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~--------~~~~~~~~~Dl~-----   75 (236)
T 3e8x_A            9 HHSSGRENLYFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRE--------RGASDIVVANLE-----   75 (236)
T ss_dssp             ------------CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH--------TTCSEEEECCTT-----
T ss_pred             cccccccccCcCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHh--------CCCceEEEcccH-----
Confidence            3344444677999999999999999999999999999999999999887654332        367 89999998     


Q ss_pred             HHHHHHHHhcCCCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCcccc
Q 019722          102 RNFVSQFHSLNLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSW  181 (336)
Q Consensus       102 ~~~~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~  181 (336)
                          +.+.+.++++|+||||||...      .+++++.+++|+.+++.+++++..    .+     .++||++||..+..
T Consensus        76 ----~~~~~~~~~~D~vi~~ag~~~------~~~~~~~~~~n~~~~~~l~~a~~~----~~-----~~~iv~~SS~~~~~  136 (236)
T 3e8x_A           76 ----EDFSHAFASIDAVVFAAGSGP------HTGADKTILIDLWGAIKTIQEAEK----RG-----IKRFIMVSSVGTVD  136 (236)
T ss_dssp             ----SCCGGGGTTCSEEEECCCCCT------TSCHHHHHHTTTHHHHHHHHHHHH----HT-----CCEEEEECCTTCSC
T ss_pred             ----HHHHHHHcCCCEEEECCCCCC------CCCccccchhhHHHHHHHHHHHHH----cC-----CCEEEEEecCCCCC
Confidence                334445568999999999753      356889999999999999998843    22     37999999965443


Q ss_pred             ccCCcccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHHHHHHH
Q 019722          182 FSGDMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLT  261 (336)
Q Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~  261 (336)
                      +..             . .+....|+.+|++++.+++       ..+  |+++.|+||++.++............   ..
T Consensus       137 ~~~-------------~-~~~~~~Y~~sK~~~e~~~~-------~~g--i~~~~lrpg~v~~~~~~~~~~~~~~~---~~  190 (236)
T 3e8x_A          137 PDQ-------------G-PMNMRHYLVAKRLADDELK-------RSS--LDYTIVRPGPLSNEESTGKVTVSPHF---SE  190 (236)
T ss_dssp             GGG-------------S-CGGGHHHHHHHHHHHHHHH-------HSS--SEEEEEEECSEECSCCCSEEEEESSC---SC
T ss_pred             CCC-------------C-hhhhhhHHHHHHHHHHHHH-------HCC--CCEEEEeCCcccCCCCCCeEEeccCC---Cc
Confidence            200             0 1456789999999998876       335  99999999999998755432111000   00


Q ss_pred             HhhcCChHHHHHHHHHHHhcCccccCCceeeccCcc
Q 019722          262 SKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNE  297 (336)
Q Consensus       262 ~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~  297 (336)
                      ......++|+|..+++++..+.   ..|+.|..+++
T Consensus       191 ~~~~i~~~Dva~~~~~~~~~~~---~~g~~~~v~~~  223 (236)
T 3e8x_A          191 ITRSITRHDVAKVIAELVDQQH---TIGKTFEVLNG  223 (236)
T ss_dssp             CCCCEEHHHHHHHHHHHTTCGG---GTTEEEEEEEC
T ss_pred             ccCcEeHHHHHHHHHHHhcCcc---ccCCeEEEeCC
Confidence            1234567999999999998553   47888877665

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=99.92  E-value=2.7e-24  Score=208.41  Aligned_cols=208  Identities=22%  Similarity=0.215  Sum_probs=167.1

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChH---HHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGA-RLVLPARSLK---AAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~-~V~~~~r~~~---~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      .++++|||||++|||++++++|+++|+ +|++++|+..   ..++..+++...  +.++.++.||++|.+++.++++.  
T Consensus       258 ~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~--g~~v~~~~~Dvtd~~~v~~~~~~--  333 (511)
T 2z5l_A          258 PSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGH--GCEVVHAACDVAERDALAALVTA--  333 (511)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTT--TCEEEEEECCSSCHHHHHHHHHH--
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhc--CCEEEEEEeCCCCHHHHHHHHhc--
Confidence            679999999999999999999999999 7999999874   355666666654  67899999999999999999886  


Q ss_pred             hcCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcc
Q 019722          110 SLNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMI  187 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~  187 (336)
                         +++|+||||||+....  .+.+.++++.++++|+.+.+++.+.+.+..   +     .++||++||.++..+     
T Consensus       334 ---~~ld~VVh~AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~---~-----~~~~V~~SS~a~~~g-----  397 (511)
T 2z5l_A          334 ---YPPNAVFHTAGILDDAVIDTLSPESFETVRGAKVCGAELLHQLTADIK---G-----LDAFVLFSSVTGTWG-----  397 (511)
T ss_dssp             ---SCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSCT---T-----CCCEEEEEEGGGTTC-----
T ss_pred             ---CCCcEEEECCcccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhcc---C-----CCEEEEEeCHHhcCC-----
Confidence               6899999999987643  567889999999999999999988764321   1     479999999988776     


Q ss_pred             cccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCce-eCCCCCccchhHHHHHHHHHHhhcC
Q 019722          188 RYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIV-RTRLTREREGFITDLVFFLTSKLLK  266 (336)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v-~T~~~~~~~~~~~~~~~~~~~~~~~  266 (336)
                                  .+++..|+++|++++.|++.++    ..|  +++++|+||++ .|+|.....   ..... .......
T Consensus       398 ------------~~g~~~YaaaKa~ld~la~~~~----~~g--i~v~sv~pG~~~~tgm~~~~~---~~~~~-~~g~~~l  455 (511)
T 2z5l_A          398 ------------NAGQGAYAAANAALDALAERRR----AAG--LPATSVAWGLWGGGGMAAGAG---EESLS-RRGLRAM  455 (511)
T ss_dssp             ------------CTTBHHHHHHHHHHHHHHHHHH----TTT--CCCEEEEECCBCSTTCCCCHH---HHHHH-HHTBCCB
T ss_pred             ------------CCCCHHHHHHHHHHHHHHHHHH----HcC--CcEEEEECCcccCCccccccc---HHHHH-hcCCCCC
Confidence                        6677899999999999988653    445  99999999999 788876521   11111 1122346


Q ss_pred             ChHHHHHHHHHHHhcCc
Q 019722          267 TIPQGAATTCYVAIHPR  283 (336)
Q Consensus       267 ~~~~~a~~~~~l~~~~~  283 (336)
                      ++++++..+..++..+.
T Consensus       456 ~~e~~a~~l~~al~~~~  472 (511)
T 2z5l_A          456 DPDAAVDALLGAMGRND  472 (511)
T ss_dssp             CHHHHHHHHHHHHHHTC
T ss_pred             CHHHHHHHHHHHHhCCC
Confidence            88999999999987543

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=99.92  E-value=2.2e-24  Score=192.68  Aligned_cols=197  Identities=17%  Similarity=0.105  Sum_probs=153.9

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcC
Q 019722           33 LSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLN  112 (336)
Q Consensus        33 l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  112 (336)
                      |++|++|||||+||||++++++|+++|++|++++|++.+..           +.++.++.+|++|++++.++++      
T Consensus         1 m~~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~-----------~~~~~~~~~Dl~d~~~~~~~~~------   63 (267)
T 3rft_A            1 MAMKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPA-----------GPNEECVQCDLADANAVNAMVA------   63 (267)
T ss_dssp             CCEEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC-----------CTTEEEEECCTTCHHHHHHHHT------
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc-----------CCCCEEEEcCCCCHHHHHHHHc------
Confidence            45789999999999999999999999999999999865322           4589999999999999998886      


Q ss_pred             CCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccccccc
Q 019722          113 LPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQ  192 (336)
Q Consensus       113 ~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~~  192 (336)
                       ++|+||||||..      ..++|++.+++|+.+++.+++++.+    .+     .++||++||..+....+..     .
T Consensus        64 -~~D~vi~~Ag~~------~~~~~~~~~~~N~~g~~~l~~a~~~----~~-----~~~iv~~SS~~~~g~~~~~-----~  122 (267)
T 3rft_A           64 -GCDGIVHLGGIS------VEKPFEQILQGNIIGLYNLYEAARA----HG-----QPRIVFASSNHTIGYYPQT-----E  122 (267)
T ss_dssp             -TCSEEEECCSCC------SCCCHHHHHHHHTHHHHHHHHHHHH----TT-----CCEEEEEEEGGGGTTSBTT-----S
T ss_pred             -CCCEEEECCCCc------CcCCHHHHHHHHHHHHHHHHHHHHH----cC-----CCEEEEEcchHHhCCCCCC-----C
Confidence             689999999983      4567899999999999999999943    22     4799999997665321111     1


Q ss_pred             ccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHHHHHHHHhhcCChHHHH
Q 019722          193 ISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSKLLKTIPQGA  272 (336)
Q Consensus       193 ~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~a  272 (336)
                      ...+.........|+.||++.+.+++.++.+++     ++++.|+||.+.+++.....           ......+++.+
T Consensus       123 ~~~e~~~~~~~~~Y~~sK~~~e~~~~~~a~~~g-----~~~~~vr~~~v~~~~~~~~~-----------~~~~~~~~d~a  186 (267)
T 3rft_A          123 RLGPDVPARPDGLYGVSKCFGENLARMYFDKFG-----QETALVRIGSCTPEPNNYRM-----------LSTWFSHDDFV  186 (267)
T ss_dssp             CBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHC-----CCEEEEEECBCSSSCCSTTH-----------HHHBCCHHHHH
T ss_pred             CCCCCCCCCCCChHHHHHHHHHHHHHHHHHHhC-----CeEEEEEeecccCCCCCCCc-----------eeeEEcHHHHH
Confidence            112222345567899999999999999998863     88999999999887654311           11245778888


Q ss_pred             HHHHHHHhcCc
Q 019722          273 ATTCYVAIHPR  283 (336)
Q Consensus       273 ~~~~~l~~~~~  283 (336)
                      ..+..++..+.
T Consensus       187 ~~~~~~~~~~~  197 (267)
T 3rft_A          187 SLIEAVFRAPV  197 (267)
T ss_dssp             HHHHHHHHCSC
T ss_pred             HHHHHHHhCCC
Confidence            88888887554

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=99.92  E-value=8.5e-25  Score=211.06  Aligned_cols=212  Identities=21%  Similarity=0.189  Sum_probs=164.1

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChH---HHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHH
Q 019722           33 LSSVTAIITGATSGIGAETARVLAKRGA-RLVLPARSLK---AAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQF  108 (336)
Q Consensus        33 l~gk~~lItGgs~gIG~aia~~L~~~G~-~V~~~~r~~~---~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~  108 (336)
                      -.++++|||||++|||++++++|+++|+ +|++++|+..   ..+++.++++..  +.++.++.||++|++++.++++++
T Consensus       224 ~~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~--g~~v~~~~~Dv~d~~~v~~~~~~i  301 (486)
T 2fr1_A          224 KPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEAL--GARTTVAACDVTDRESVRELLGGI  301 (486)
T ss_dssp             CCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHT--TCEEEEEECCTTCHHHHHHHHHTS
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhc--CCEEEEEEeCCCCHHHHHHHHHHH
Confidence            3689999999999999999999999999 5999999875   355666666654  578999999999999999999988


Q ss_pred             HhcCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCc
Q 019722          109 HSLNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDM  186 (336)
Q Consensus       109 ~~~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~  186 (336)
                       ..++++|+||||||+....  .+.+.+++++++++|+.|.+.+.+++.+.    +     .++||++||.++..+    
T Consensus       302 -~~~g~ld~VIh~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~~----~-----~~~~V~~SS~a~~~g----  367 (486)
T 2fr1_A          302 -GDDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTREL----D-----LTAFVLFSSFASAFG----  367 (486)
T ss_dssp             -CTTSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTS----C-----CSEEEEEEEHHHHTC----
T ss_pred             -HhcCCCcEEEECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhCcC----C-----CCEEEEEcChHhcCC----
Confidence             5578999999999986543  56788999999999999999999877542    1     479999999888776    


Q ss_pred             ccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCC-CCCccchhHHHHHHHHHHhhc
Q 019722          187 IRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTR-LTREREGFITDLVFFLTSKLL  265 (336)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~-~~~~~~~~~~~~~~~~~~~~~  265 (336)
                                   .+++..|+++|++++.|++.++    ..|  +++++|+||.+.++ |.....   ..... ......
T Consensus       368 -------------~~g~~~Yaaaka~l~~la~~~~----~~g--i~v~~i~pG~~~~~gm~~~~~---~~~~~-~~g~~~  424 (486)
T 2fr1_A          368 -------------APGLGGYAPGNAYLDGLAQQRR----SDG--LPATAVAWGTWAGSGMAEGPV---ADRFR-RHGVIE  424 (486)
T ss_dssp             -------------CTTCTTTHHHHHHHHHHHHHHH----HTT--CCCEEEEECCBC---------------CT-TTTEEC
T ss_pred             -------------CCCCHHHHHHHHHHHHHHHHHH----hcC--CeEEEEECCeeCCCcccchhH---HHHHH-hcCCCC
Confidence                         5667789999999998876543    446  99999999999876 433210   00000 011234


Q ss_pred             CChHHHHHHHHHHHhcCc
Q 019722          266 KTIPQGAATTCYVAIHPR  283 (336)
Q Consensus       266 ~~~~~~a~~~~~l~~~~~  283 (336)
                      .++++++..+..++..+.
T Consensus       425 i~~e~~a~~l~~~l~~~~  442 (486)
T 2fr1_A          425 MPPETACRALQNALDRAE  442 (486)
T ss_dssp             BCHHHHHHHHHHHHHTTC
T ss_pred             CCHHHHHHHHHHHHhCCC
Confidence            578999999999987443

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=99.91  E-value=1.4e-22  Score=187.08  Aligned_cols=262  Identities=15%  Similarity=0.088  Sum_probs=181.5

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCCh-HHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCCC
Q 019722           36 VTAIITGATSGIGAETARVLAKRGARLVLPARSL-KAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLP  114 (336)
Q Consensus        36 k~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~-~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  114 (336)
                      +++|||||+|+||++++++|+++|++|++++|+. .......+.+..   ..++.++.+|+++++++.++++..     +
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~---~~~~~~~~~Dl~d~~~~~~~~~~~-----~   73 (347)
T 1orr_A            2 AKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSS---LGNFEFVHGDIRNKNDVTRLITKY-----M   73 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHT---TCCCEEEECCTTCHHHHHHHHHHH-----C
T ss_pred             cEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhhhcc---CCceEEEEcCCCCHHHHHHHHhcc-----C
Confidence            5799999999999999999999999999999853 222233344433   246889999999999999988752     6


Q ss_pred             ccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcccccc---
Q 019722          115 LNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLG---  191 (336)
Q Consensus       115 id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~---  191 (336)
                      +|+||||||....  ..+.+++++.+++|+.++..+++++.+...        .+++|++||.+.. +.....++..   
T Consensus        74 ~d~vih~A~~~~~--~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~--------~~~iv~~SS~~v~-g~~~~~~~~e~~~  142 (347)
T 1orr_A           74 PDSCFHLAGQVAM--TTSIDNPCMDFEINVGGTLNLLEAVRQYNS--------NCNIIYSSTNKVY-GDLEQYKYNETET  142 (347)
T ss_dssp             CSEEEECCCCCCH--HHHHHCHHHHHHHHHHHHHHHHHHHHHHCT--------TCEEEEEEEGGGG-TTCTTSCEEECSS
T ss_pred             CCEEEECCcccCh--hhhhhCHHHHHHHHHHHHHHHHHHHHHhCC--------CceEEEeccHHHh-CCCCcCCcccccc
Confidence            9999999997432  123457788999999999999999988652        2599999996532 2211111100   


Q ss_pred             --------cccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCcc--chhHHHHHHHHH
Q 019722          192 --------QISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRER--EGFITDLVFFLT  261 (336)
Q Consensus       192 --------~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~--~~~~~~~~~~~~  261 (336)
                              ....+.....+...|+.+|++.+.+++.++.++   |  ++++.|+||.+.++.....  ............
T Consensus       143 ~~~~~~~~~~~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---g--i~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~  217 (347)
T 1orr_A          143 RYTCVDKPNGYDESTQLDFHSPYGCSKGAADQYMLDYARIF---G--LNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAV  217 (347)
T ss_dssp             CEEETTCTTCBCTTSCCCCCHHHHHHHHHHHHHHHHHHHHH---C--CEEEEEEECCEECTTCCCBTTBCHHHHHHHHHH
T ss_pred             cccccccccCccccCCCCCCCchHHHHHHHHHHHHHHHHHh---C--CcEEEEccCceeCcCCCCCCcCcHHHHHHHHHH
Confidence                    001112223456789999999999999999876   4  9999999999999975432  112222222221


Q ss_pred             Hhh------------------cCChHHHHHHHHHHHhcCccccCCceeeccCccc--ccccCCCCHHHHHHHHHHHHHhh
Q 019722          262 SKL------------------LKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEA--WTSKLGSNSNEASRLWAASELLV  321 (336)
Q Consensus       262 ~~~------------------~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~--~~~~~~~~~~~~~~~w~~~~~~~  321 (336)
                      ...                  ...++|+|.++++++..  ....+|+.|+.+++.  ..+-        .++.+.+.+.+
T Consensus       218 ~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~--~~~~~g~~~~v~~~~~~~~s~--------~e~~~~i~~~~  287 (347)
T 1orr_A          218 EIKNGINKPFTISGNGKQVRDVLHAEDMISLYFTALAN--VSKIRGNAFNIGGTIVNSLSL--------LELFKLLEDYC  287 (347)
T ss_dssp             HHHTTCCCCEEEESSSCCEEECEEHHHHHHHHHHHHHT--HHHHTTCEEEESSCGGGEEEH--------HHHHHHHHHHH
T ss_pred             hCcccCCCCeEEecCCcceEeeEEHHHHHHHHHHHHhc--cccCCCCEEEeCCCCCCCccH--------HHHHHHHHHHh
Confidence            111                  12678999999998863  234578888777764  2442        66777777777


Q ss_pred             ccCCCCCCCC
Q 019722          322 SRDPKSVFDP  331 (336)
Q Consensus       322 ~~~~~~~~~p  331 (336)
                      +...+..+.|
T Consensus       288 g~~~~~~~~~  297 (347)
T 1orr_A          288 NIDMRFTNLP  297 (347)
T ss_dssp             TCCCCEEEEC
T ss_pred             CCCCCceeCC
Confidence            7665444333

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=99.91  E-value=2.2e-22  Score=185.21  Aligned_cols=256  Identities=12%  Similarity=0.065  Sum_probs=176.5

Q ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEE-eccCCCHHHHHHHHHHHHh
Q 019722           32 NLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVL-PLDLSSLSSVRNFVSQFHS  110 (336)
Q Consensus        32 ~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~-~~Dl~~~~~v~~~~~~~~~  110 (336)
                      .++++++|||||+|+||++++++|+++|++|++++|+.++.+.+.+.+.... +.++.++ .+|+++.+++.++++    
T Consensus         8 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~d~~~~~~~~~----   82 (342)
T 1y1p_A            8 LPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKY-PGRFETAVVEDMLKQGAYDEVIK----   82 (342)
T ss_dssp             SCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHS-TTTEEEEECSCTTSTTTTTTTTT----
T ss_pred             CCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccC-CCceEEEEecCCcChHHHHHHHc----
Confidence            4788999999999999999999999999999999999887766655554432 2578888 899999887766654    


Q ss_pred             cCCCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCc---c
Q 019722          111 LNLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDM---I  187 (336)
Q Consensus       111 ~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~---~  187 (336)
                         ++|+||||||.....     +++++.+++|+.++..+++++.+.   .+     .+++|++||......+...   .
T Consensus        83 ---~~d~vih~A~~~~~~-----~~~~~~~~~n~~g~~~ll~~~~~~---~~-----~~~iv~~SS~~~~~~~~~~~~~~  146 (342)
T 1y1p_A           83 ---GAAGVAHIASVVSFS-----NKYDEVVTPAIGGTLNALRAAAAT---PS-----VKRFVLTSSTVSALIPKPNVEGI  146 (342)
T ss_dssp             ---TCSEEEECCCCCSCC-----SCHHHHHHHHHHHHHHHHHHHHTC---TT-----CCEEEEECCGGGTCCCCTTCCCC
T ss_pred             ---CCCEEEEeCCCCCCC-----CCHHHHHHHHHHHHHHHHHHHHhC---CC-----CcEEEEeccHHHhcCCCCCCCCc
Confidence               699999999975432     356789999999999999988752   11     3799999997654321100   1


Q ss_pred             ccccccc-----------CCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccc-h-hHH
Q 019722          188 RYLGQIS-----------RNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRERE-G-FIT  254 (336)
Q Consensus       188 ~~~~~~~-----------~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~-~-~~~  254 (336)
                      .+++...           .......+...|+.+|++.+.+++.++.++.. +  ++++.|+||.+.++...... . ...
T Consensus       147 ~~~E~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~-~--~~~~~~rp~~v~g~~~~~~~~~~~~~  223 (342)
T 1y1p_A          147 YLDEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENKP-H--FTLNAVLPNYTIGTIFDPETQSGSTS  223 (342)
T ss_dssp             EECTTCCCHHHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCC-S--SEEEEEEESEEECCCSCTTTCCCHHH
T ss_pred             ccCccccCchhhhhhccccccccccchHHHHHHHHHHHHHHHHHHHhcCC-C--ceEEEEcCCceECCCCCCCCCCccHH
Confidence            1111000           00001235678999999999999999998865 5  99999999999999765421 1 222


Q ss_pred             HHHHHHH------------HhhcCChHHHHHHHHHHHhcCccccCCceeeccCcccccccCCCCHHHHHHHHHHHHHhhc
Q 019722          255 DLVFFLT------------SKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWTSKLGSNSNEASRLWAASELLVS  322 (336)
Q Consensus       255 ~~~~~~~------------~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~  322 (336)
                      .+...+.            ......++|+|.+++.++..+.   .+|..+...+.. .+        ..++.+.+.++++
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~---~~g~~~~~~g~~-~s--------~~e~~~~i~~~~~  291 (342)
T 1y1p_A          224 GWMMSLFNGEVSPALALMPPQYYVSAVDIGLLHLGCLVLPQ---IERRRVYGTAGT-FD--------WNTVLATFRKLYP  291 (342)
T ss_dssp             HHHHHHHTTCCCHHHHTCCSEEEEEHHHHHHHHHHHHHCTT---CCSCEEEECCEE-EC--------HHHHHHHHHHHCT
T ss_pred             HHHHHHHcCCCccccccCCcCCEeEHHHHHHHHHHHHcCcc---cCCceEEEeCCC-CC--------HHHHHHHHHHHCC
Confidence            2222211            1123457899999999887432   356544344432 22        1455555556665


Q ss_pred             c
Q 019722          323 R  323 (336)
Q Consensus       323 ~  323 (336)
                      .
T Consensus       292 ~  292 (342)
T 1y1p_A          292 S  292 (342)
T ss_dssp             T
T ss_pred             C
Confidence            4

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.90  E-value=1.4e-22  Score=186.71  Aligned_cols=263  Identities=16%  Similarity=0.023  Sum_probs=183.6

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCC
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNL  113 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  113 (336)
                      .++++|||||+|+||++++++|+++|++|++++|+.+...+..+.+.... +.++.++++|+++++++.++++.     +
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~d~~~~~~~~~~-----~   77 (341)
T 3enk_A            4 TKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKIT-GKTPAFHETDVSDERALARIFDA-----H   77 (341)
T ss_dssp             SSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHH-SCCCEEECCCTTCHHHHHHHHHH-----S
T ss_pred             CCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhc-CCCceEEEeecCCHHHHHHHHhc-----c
Confidence            46899999999999999999999999999999998766555555554432 45789999999999999998875     4


Q ss_pred             CccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcccccccc
Q 019722          114 PLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQI  193 (336)
Q Consensus       114 ~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~~~  193 (336)
                      ++|+||||||.....  ...+..++.+++|+.+++.+++++.    +.+     .++||++||.... +.....     +
T Consensus        78 ~~d~vih~A~~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~----~~~-----~~~iv~~SS~~~~-g~~~~~-----~  140 (341)
T 3enk_A           78 PITAAIHFAALKAVG--ESVAKPIEYYRNNLDSLLSLLRVMR----ERA-----VKRIVFSSSATVY-GVPERS-----P  140 (341)
T ss_dssp             CCCEEEECCCCCCHH--HHHHCHHHHHHHHHHHHHHHHHHHH----HTT-----CCEEEEEEEGGGB-CSCSSS-----S
T ss_pred             CCcEEEECccccccC--ccccChHHHHHHHHHHHHHHHHHHH----hCC-----CCEEEEEecceEe-cCCCCC-----C
Confidence            799999999975432  1234456789999999998877643    332     3699999996543 322111     1


Q ss_pred             cCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCcc---------chhHHHHHHHHHHh-
Q 019722          194 SRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRER---------EGFITDLVFFLTSK-  263 (336)
Q Consensus       194 ~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~---------~~~~~~~~~~~~~~-  263 (336)
                      .++.........|+.+|++.+.+++.++.++.  +  ++++.++|+.+.++.....         .............. 
T Consensus       141 ~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~--~--~~~~~lRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~  216 (341)
T 3enk_A          141 IDETFPLSATNPYGQTKLMAEQILRDVEAADP--S--WRVATLRYFNPVGAHESGLIGEDPAGIPNNLMPYVAQVAVGKL  216 (341)
T ss_dssp             BCTTSCCBCSSHHHHHHHHHHHHHHHHHHHCT--T--CEEEEEEECEEECCCTTSSCCCCCSSSCSSHHHHHHHHHHTSS
T ss_pred             CCCCCCCCCCChhHHHHHHHHHHHHHHhhcCC--C--ceEEEEeeccccCCccccccCCCcccCccchHHHHHHHHhcCC
Confidence            12222244556899999999999999998864  3  9999999999988743211         11222222111110 


Q ss_pred             -------------------hcCChHHHHHHHHHHHhcCccccCCceeeccCcccccccCCCCHHHHHHHHHHHHHhhccC
Q 019722          264 -------------------LLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWTSKLGSNSNEASRLWAASELLVSRD  324 (336)
Q Consensus       264 -------------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~  324 (336)
                                         ....++|+|.+++.++..+. ....|+.|+.+++...+-        .++.+.+.+.++..
T Consensus       217 ~~~~~~g~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~-~~~~~~~~ni~~~~~~s~--------~e~~~~i~~~~g~~  287 (341)
T 3enk_A          217 EKLRVFGSDYPTPDGTGVRDYIHVVDLARGHIAALDALE-RRDASLTVNLGTGRGYSV--------LEVVRAFEKASGRA  287 (341)
T ss_dssp             SCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHH-HHTSCEEEEESCSCCEEH--------HHHHHHHHHHHCSC
T ss_pred             CceEEeCCccCCCCCCeeEeeEEHHHHHHHHHHHHHhhh-cCCcceEEEeCCCCceeH--------HHHHHHHHHHhCCC
Confidence                               01235889999998887421 224678888877665553        77777788888877


Q ss_pred             CCCCCCCC
Q 019722          325 PKSVFDPL  332 (336)
Q Consensus       325 ~~~~~~p~  332 (336)
                      .+..+.|.
T Consensus       288 ~~~~~~~~  295 (341)
T 3enk_A          288 VPYELVAR  295 (341)
T ss_dssp             CCEEEECC
T ss_pred             cceeeCCC
Confidence            65554443

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=99.90  E-value=1.3e-22  Score=187.81  Aligned_cols=213  Identities=16%  Similarity=0.138  Sum_probs=164.5

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHC-CC-EEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHh
Q 019722           33 LSSVTAIITGATSGIGAETARVLAKR-GA-RLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHS  110 (336)
Q Consensus        33 l~gk~~lItGgs~gIG~aia~~L~~~-G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  110 (336)
                      +++|++|||||+|+||++++++|+++ |+ +|++++|++.+.....+.+.    ..++.++.+|++|.+++.++++    
T Consensus        19 ~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~----~~~v~~~~~Dl~d~~~l~~~~~----   90 (344)
T 2gn4_A           19 LDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFN----DPRMRFFIGDVRDLERLNYALE----   90 (344)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHC----CTTEEEEECCTTCHHHHHHHTT----
T ss_pred             hCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhc----CCCEEEEECCCCCHHHHHHHHh----
Confidence            78999999999999999999999999 98 99999999887766655553    3579999999999998887764    


Q ss_pred             cCCCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccccc
Q 019722          111 LNLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYL  190 (336)
Q Consensus       111 ~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~  190 (336)
                         ++|+||||||.....  .......+.+++|+.++..+++++.+..         .+++|++||..+..         
T Consensus        91 ---~~D~Vih~Aa~~~~~--~~~~~~~~~~~~Nv~gt~~l~~aa~~~~---------v~~~V~~SS~~~~~---------  147 (344)
T 2gn4_A           91 ---GVDICIHAAALKHVP--IAEYNPLECIKTNIMGASNVINACLKNA---------ISQVIALSTDKAAN---------  147 (344)
T ss_dssp             ---TCSEEEECCCCCCHH--HHHHSHHHHHHHHHHHHHHHHHHHHHTT---------CSEEEEECCGGGSS---------
T ss_pred             ---cCCEEEECCCCCCCC--chhcCHHHHHHHHHHHHHHHHHHHHhCC---------CCEEEEecCCccCC---------
Confidence               689999999975421  1224456899999999999999998752         36999999964432         


Q ss_pred             ccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHHHHHHHHh-------
Q 019722          191 GQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSK-------  263 (336)
Q Consensus       191 ~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~-------  263 (336)
                                 +...|+.||++.+.+++.+++++...+  +++++|+||.|.++...-    .+.+.......       
T Consensus       148 -----------p~~~Y~~sK~~~E~~~~~~~~~~~~~g--~~~~~vRpg~v~g~~~~~----i~~~~~~~~~g~~~~~i~  210 (344)
T 2gn4_A          148 -----------PINLYGATKLCSDKLFVSANNFKGSSQ--TQFSVVRYGNVVGSRGSV----VPFFKKLVQNKASEIPIT  210 (344)
T ss_dssp             -----------CCSHHHHHHHHHHHHHHHGGGCCCSSC--CEEEEECCCEETTCTTSH----HHHHHHHHHHTCCCEEES
T ss_pred             -----------CccHHHHHHHHHHHHHHHHHHHhCCCC--cEEEEEEeccEECCCCCH----HHHHHHHHHcCCCceEEe
Confidence                       234799999999999999998877666  999999999999976432    22222221111       


Q ss_pred             ------hcCChHHHHHHHHHHHhcCccccCCceeeccCcc
Q 019722          264 ------LLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNE  297 (336)
Q Consensus       264 ------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~  297 (336)
                            ....++|+|.+++.++..+    ..|+.|...+.
T Consensus       211 ~~~~~r~~i~v~D~a~~v~~~l~~~----~~g~~~~~~~~  246 (344)
T 2gn4_A          211 DIRMTRFWITLDEGVSFVLKSLKRM----HGGEIFVPKIP  246 (344)
T ss_dssp             CTTCEEEEECHHHHHHHHHHHHHHC----CSSCEEEECCC
T ss_pred             CCCeEEeeEEHHHHHHHHHHHHhhc----cCCCEEecCCC
Confidence                  1346789999999998743    25666655554

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=99.90  E-value=6.7e-23  Score=188.51  Aligned_cols=246  Identities=14%  Similarity=0.084  Sum_probs=164.8

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      ..+++++++|||||+|+||++++++|+++|++|++++|+.....+..    ..  -.++.++.+|++|.+++.++++++ 
T Consensus        15 ~~~~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~--l~~v~~~~~Dl~d~~~~~~~~~~~-   87 (330)
T 2pzm_A           15 VPRGSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVL----PP--VAGLSVIEGSVTDAGLLERAFDSF-   87 (330)
T ss_dssp             CSTTTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGS----CS--CTTEEEEECCTTCHHHHHHHHHHH-
T ss_pred             cccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhh----hc--cCCceEEEeeCCCHHHHHHHHhhc-
Confidence            45688999999999999999999999999999999999754322111    11  147889999999999999988765 


Q ss_pred             hcCCCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcccc
Q 019722          110 SLNLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRY  189 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~  189 (336)
                          ++|+||||||.....   +.++++  +++|+.++..+++++...    +     .++||++||.+.. +.....  
T Consensus        88 ----~~D~vih~A~~~~~~---~~~~~~--~~~N~~~~~~l~~a~~~~----~-----~~~iV~~SS~~~~-~~~~~~--  146 (330)
T 2pzm_A           88 ----KPTHVVHSAAAYKDP---DDWAED--AATNVQGSINVAKAASKA----G-----VKRLLNFQTALCY-GRPATV--  146 (330)
T ss_dssp             ----CCSEEEECCCCCSCT---TCHHHH--HHHHTHHHHHHHHHHHHH----T-----CSEEEEEEEGGGG-CSCSSS--
T ss_pred             ----CCCEEEECCccCCCc---cccChh--HHHHHHHHHHHHHHHHHc----C-----CCEEEEecCHHHh-CCCccC--
Confidence                699999999976432   445555  999999999999998742    2     3699999997543 221100  


Q ss_pred             cccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHHHHHHH--------
Q 019722          190 LGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLT--------  261 (336)
Q Consensus       190 ~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~--------  261 (336)
                      .. +.++..  .+...|+.+|++.+.+++.+  +       +....|.|+.+..+...  ............        
T Consensus       147 ~~-~~~E~~--~~~~~Y~~sK~~~e~~~~~~--~-------~~~~~iR~~~v~gp~~~--~~~~~~~~~~~~~~~~~~~~  212 (330)
T 2pzm_A          147 PI-PIDSPT--APFTSYGISKTAGEAFLMMS--D-------VPVVSLRLANVTGPRLA--IGPIPTFYKRLKAGQKCFCS  212 (330)
T ss_dssp             SB-CTTCCC--CCCSHHHHHHHHHHHHHHTC--S-------SCEEEEEECEEECTTCC--SSHHHHHHHHHHTTCCCCEE
T ss_pred             CC-CcCCCC--CCCChHHHHHHHHHHHHHHc--C-------CCEEEEeeeeeECcCCC--CCHHHHHHHHHHcCCEEeCC
Confidence            00 001111  23457999999999999887  2       33344444444433321  111111211111        


Q ss_pred             --HhhcCChHHHHH-HHHHHHhcCccccCCceeeccCcccccccCCCCHHHHHHHHHHHHHhhccCCCCCCCC
Q 019722          262 --SKLLKTIPQGAA-TTCYVAIHPRLVNVSGKYFADCNEAWTSKLGSNSNEASRLWAASELLVSRDPKSVFDP  331 (336)
Q Consensus       262 --~~~~~~~~~~a~-~~~~l~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~p  331 (336)
                        ......++|+|. ++++++..+.     |..|+.+++...+-        .++.+.+.+.++.. +..+.|
T Consensus       213 ~~~~~~i~~~Dva~~a~~~~~~~~~-----g~~~~v~~~~~~s~--------~e~~~~i~~~~g~~-~~~~~~  271 (330)
T 2pzm_A          213 DTVRDFLDMSDFLAIADLSLQEGRP-----TGVFNVSTGEGHSI--------KEVFDVVLDYVGAT-LAEPVP  271 (330)
T ss_dssp             SCEECEEEHHHHHHHHHHHTSTTCC-----CEEEEESCSCCEEH--------HHHHHHHHHHHTCC-CSSCCC
T ss_pred             CCEecceeHHHHHHHHHHHHhhcCC-----CCEEEeCCCCCCCH--------HHHHHHHHHHhCCC-CceeCC
Confidence              112346789999 9988887432     77777777655553        67777777888876 444444

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=99.90  E-value=1.3e-22  Score=185.51  Aligned_cols=245  Identities=13%  Similarity=0.100  Sum_probs=175.1

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcC
Q 019722           33 LSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLN  112 (336)
Q Consensus        33 l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  112 (336)
                      .+-+++|||||+|+||++++++|+++|++|++++|+... ..           .++.++.+|++|++++.++++.     
T Consensus        10 ~~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~~-----------l~~~~~~~Dl~d~~~~~~~~~~-----   72 (321)
T 2pk3_A           10 HGSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-KL-----------PNVEMISLDIMDSQRVKKVISD-----   72 (321)
T ss_dssp             ---CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-CC-----------TTEEEEECCTTCHHHHHHHHHH-----
T ss_pred             cCcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcc-cc-----------ceeeEEECCCCCHHHHHHHHHh-----
Confidence            355899999999999999999999999999999998653 11           1688899999999999988875     


Q ss_pred             CCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccccccc
Q 019722          113 LPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQ  192 (336)
Q Consensus       113 ~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~~  192 (336)
                      +++|+||||||.....  .+.+++++.+++|+.++..+++++ +.+.  +     .+++|++||.+.... ..   ....
T Consensus        73 ~~~d~vih~A~~~~~~--~~~~~~~~~~~~Nv~g~~~l~~a~-~~~~--~-----~~~iv~~SS~~v~g~-~~---~~~~  138 (321)
T 2pk3_A           73 IKPDYIFHLAAKSSVK--DSWLNKKGTFSTNVFGTLHVLDAV-RDSN--L-----DCRILTIGSSEEYGM-IL---PEES  138 (321)
T ss_dssp             HCCSEEEECCSCCCHH--HHTTCHHHHHHHHHHHHHHHHHHH-HHHT--C-----CCEEEEEEEGGGTBS-CC---GGGC
T ss_pred             cCCCEEEEcCcccchh--hhhhcHHHHHHHHHHHHHHHHHHH-HHhC--C-----CCeEEEEccHHhcCC-CC---CCCC
Confidence            3699999999975421  234578899999999999999999 5542  1     379999999754321 10   0011


Q ss_pred             ccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHHHHHHHH---h------
Q 019722          193 ISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTS---K------  263 (336)
Q Consensus       193 ~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~---~------  263 (336)
                      +.++..+..+...|+.+|++.+.+++.++.+.   |  ++++.++||.+.++..... .....+......   .      
T Consensus       139 ~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---g--i~~~ilrp~~v~g~~~~~~-~~~~~~~~~~~~~~~g~~~~~~  212 (321)
T 2pk3_A          139 PVSEENQLRPMSPYGVSKASVGMLARQYVKAY---G--MDIIHTRTFNHIGPGQSLG-FVTQDFAKQIVDIEMEKQEPII  212 (321)
T ss_dssp             SBCTTSCCBCCSHHHHHHHHHHHHHHHHHHHH---C--CEEEEEEECEEECTTCCTT-SHHHHHHHHHHHHHTTSSCSEE
T ss_pred             CCCCCCCCCCCCccHHHHHHHHHHHHHHHHHc---C--CCEEEEEeCcccCcCCCCC-chHHHHHHHHHHHhcCCCCCeE
Confidence            11222224456689999999999999999874   4  9999999999999976542 122222222211   1      


Q ss_pred             ---------hcCChHHHHHHHHHHHhcCccccCCceeeccCcccccccCCCCHHHHHHHHHHHHHhhccCCC
Q 019722          264 ---------LLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWTSKLGSNSNEASRLWAASELLVSRDPK  326 (336)
Q Consensus       264 ---------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~  326 (336)
                               ....++|+|.++++++..+    .+|+.|..+++...+-        .++.+.+.+.++....
T Consensus       213 ~~~~~~~~~~~v~v~Dva~a~~~~~~~~----~~g~~~~i~~~~~~s~--------~e~~~~i~~~~g~~~~  272 (321)
T 2pk3_A          213 KVGNLEAVRDFTDVRDIVQAYWLLSQYG----KTGDVYNVCSGIGTRI--------QDVLDLLLAMANVKID  272 (321)
T ss_dssp             EESCSSCEEEEEEHHHHHHHHHHHHHHC----CTTCEEEESCSCEEEH--------HHHHHHHHHHSSSCCE
T ss_pred             EeCCCCcEEeeEEHHHHHHHHHHHHhCC----CCCCeEEeCCCCCeeH--------HHHHHHHHHHhCCCCc
Confidence                     1235789999999998754    3677777777655553        6666777777776543

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=99.90  E-value=4.8e-22  Score=182.41  Aligned_cols=255  Identities=10%  Similarity=-0.024  Sum_probs=179.5

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHH-HCCCEEEEeeCChH------------HHHHHHHHHHhhCCCCceEEEeccCC
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLA-KRGARLVLPARSLK------------AAEEAKARLASDCPGSDIVVLPLDLS   96 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~-~~G~~V~~~~r~~~------------~~~~~~~~l~~~~~~~~~~~~~~Dl~   96 (336)
                      .....+|+||||||++|||+|++..|+ ..|++++++.++.+            ......+.+++.  +.+...+.||++
T Consensus        45 ~~~~~pK~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~--G~~a~~i~~Dv~  122 (401)
T 4ggo_A           45 AGAKAPKNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKRE--GLYSVTIDGDAF  122 (401)
T ss_dssp             TTSCCCCEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHH--TCCEEEEESCTT
T ss_pred             cccCCCCEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHc--CCCceeEeCCCC
Confidence            456788999999999999999999999 68999999887543            123344555555  789999999999


Q ss_pred             CHHHHHHHHHHHHhcCCCccEEEEcccCCCCCC------------------------------------CCCchhhhhH-
Q 019722           97 SLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQH------------------------------------AISEDGIEMT-  139 (336)
Q Consensus        97 ~~~~v~~~~~~~~~~~~~id~lv~nAg~~~~~~------------------------------------~~~~~~~~~~-  139 (336)
                      ++++++++++++.+.+|+||+||||++......                                    ..+.++++.+ 
T Consensus       123 d~e~i~~vi~~i~~~~G~IDiLVhS~A~~~r~~p~~g~~~~S~LKpi~~~~~~~~ldt~~~~i~~~~l~pat~eeie~T~  202 (401)
T 4ggo_A          123 SDEIKAQVIEEAKKKGIKFDLIVYSLASPVRTDPDTGIMHKSVLKPFGKTFTGKTVDPFTGELKEISAEPANDEEAAATV  202 (401)
T ss_dssp             SHHHHHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEECTTTCCEEEEEECCCCHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHhcCCCCEEEEecccccccCCCCCceeeeeecccccccccccccccccccccccccCCcHHHHHHHH
Confidence            999999999999999999999999999653210                                    0122333443 


Q ss_pred             --HHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcccccccccCCCCCCChhh--HhHHHHHHHHH
Q 019722          140 --FATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATR--AYALSKLANVL  215 (336)
Q Consensus       140 --~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~Y~~sK~a~~~  215 (336)
                        |....++.+...+...+.|.+       ++++|.+|+.++...                 +|.+.  .++.+|++|+.
T Consensus       203 ~vMg~s~~s~w~~al~~a~lla~-------G~siva~SYiGse~t-----------------~P~Y~~G~mG~AKaaLEa  258 (401)
T 4ggo_A          203 KVMGGEDWERWIKQLSKEGLLEE-------GCITLAYSYIGPEAT-----------------QALYRKGTIGKAKEHLEA  258 (401)
T ss_dssp             HHHSSHHHHHHHHHHHHTTCEEE-------EEEEEEEECCCCGGG-----------------HHHHTTSHHHHHHHHHHH
T ss_pred             HHHhhhHHHHHHHHHHhhhcccC-------CceEEEEeccCccee-----------------ecCCCccHHHHHHHHHHH
Confidence              444556666666666666644       479999999877654                 44433  68999999999


Q ss_pred             HHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHH--HHHHHHHHhhcCChHHHHHHHHHHHhcCccccCC-cee-
Q 019722          216 HTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFIT--DLVFFLTSKLLKTIPQGAATTCYVAIHPRLVNVS-GKY-  291 (336)
Q Consensus       216 l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~--~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~-G~~-  291 (336)
                      .++.|+.++++    +++|++++|.+.|.....++.+--  ..+.. ..+..+..|..+..+..|.....  |-+ |.. 
T Consensus       259 ~~r~La~eL~~----~~a~v~v~~a~vT~AssaIP~~ply~~~l~k-vmk~~g~heg~ieq~~rl~~~~l--y~~~~~~~  331 (401)
T 4ggo_A          259 TAHRLNKENPS----IRAFVSVNKGLVTRASAVIPVIPLYLASLFK-VMKEKGNHEGCIEQITRLYAERL--YRKDGTIP  331 (401)
T ss_dssp             HHHHHHHHCTT----EEEEEEECCCCCCTTGGGSSSHHHHHHHHHH-HHHHHTCCCCHHHHHHHHHHHTT--SCTTCCCC
T ss_pred             HHHHHHHhcCC----CcEEEEEcCccccchhhcCCCchHHHHHHHH-HHHhcCCCCchHHHHHHHHHHhh--ccCCCCCC
Confidence            99999999874    999999999999999888864221  11111 23345666777788888876321  212 222 


Q ss_pred             eccCcccccccCCCCHHHH---HHHHHHH
Q 019722          292 FADCNEAWTSKLGSNSNEA---SRLWAAS  317 (336)
Q Consensus       292 ~~~~~~~~~~~~~~~~~~~---~~~w~~~  317 (336)
                      ++..|.....+.-.+++.+   +++|+++
T Consensus       332 ~D~~~r~r~d~~el~~~vq~~v~~~~~~~  360 (401)
T 4ggo_A          332 VDEENRIRIDDWELEEDVQKAVSALMEKV  360 (401)
T ss_dssp             CCTTSCEESCTTTTCHHHHHHHHHHHHHC
T ss_pred             cCCCCCccCchhhcCHHHHHHHHHHHHHh
Confidence            2333334444444455555   5566543

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=99.89  E-value=1.5e-22  Score=186.50  Aligned_cols=254  Identities=16%  Similarity=0.125  Sum_probs=169.3

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcC
Q 019722           33 LSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLN  112 (336)
Q Consensus        33 l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  112 (336)
                      |++|++|||||+|+||++++++|+++|++|++++|+.+....  ..+.......++.++.+|++|++++.++++.+    
T Consensus         1 m~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~----   74 (345)
T 2z1m_A            1 MSGKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFAS--WRLKELGIENDVKIIHMDLLEFSNIIRTIEKV----   74 (345)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTT--HHHHHTTCTTTEEECCCCTTCHHHHHHHHHHH----
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCccccc--ccHhhccccCceeEEECCCCCHHHHHHHHHhc----
Confidence            468999999999999999999999999999999998754321  11222212347899999999999999998866    


Q ss_pred             CCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccccccc
Q 019722          113 LPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQ  192 (336)
Q Consensus       113 ~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~~  192 (336)
                       ++|+||||||....  ..+.++++..+++|+.++..+++++... ..       .+++|++||... ++.....++   
T Consensus        75 -~~d~vih~A~~~~~--~~~~~~~~~~~~~Nv~g~~~l~~a~~~~-~~-------~~~iv~~SS~~v-yg~~~~~~~---  139 (345)
T 2z1m_A           75 -QPDEVYNLAAQSFV--GVSFEQPILTAEVDAIGVLRILEALRTV-KP-------DTKFYQASTSEM-FGKVQEIPQ---  139 (345)
T ss_dssp             -CCSEEEECCCCCCH--HHHTTSHHHHHHHHTHHHHHHHHHHHHH-CT-------TCEEEEEEEGGG-GCSCSSSSB---
T ss_pred             -CCCEEEECCCCcch--hhhhhCHHHHHHHHHHHHHHHHHHHHHh-CC-------CceEEEEechhh-cCCCCCCCC---
Confidence             68999999997532  2235678899999999999999998852 10       269999999753 222111111   


Q ss_pred             ccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHc---cCCCcEEEEEeeCCceeCCCCCccchhHHHHHHH-HH-------
Q 019722          193 ISRNKSHYDATRAYALSKLANVLHTKELAQRLK---QMEANVTVNCVHPGIVRTRLTREREGFITDLVFF-LT-------  261 (336)
Q Consensus       193 ~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~---~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~-~~-------  261 (336)
                        .+.....+...|+.+|++.+.+++.++.+++   ..+  +.+|.+.||...|.+.............. ..       
T Consensus       140 --~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~--r~~~~~gpg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (345)
T 2z1m_A          140 --TEKTPFYPRSPYAVAKLFGHWITVNYREAYNMFACSG--ILFNHESPLRGIEFVTRKITYSLARIKYGLQDKLVLGNL  215 (345)
T ss_dssp             --CTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEE--EECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCT
T ss_pred             --CccCCCCCCChhHHHHHHHHHHHHHHHHHhCCceEee--eeeeecCCCCCCcchhHHHHHHHHHHHcCCCCeeeeCCC
Confidence              1122244556899999999999999998875   223  67788888887766532211111110000 00       


Q ss_pred             -H-hhcCChHHHHHHHHHHHhcCccccCCceeeccCcccccccCCCCHHHHHHHHHHHHHhhccC
Q 019722          262 -S-KLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWTSKLGSNSNEASRLWAASELLVSRD  324 (336)
Q Consensus       262 -~-~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~  324 (336)
                       . .....++|+|.++++++..+.    .|.| +..+....+-        .++.+.+.+.++..
T Consensus       216 ~~~~~~~~v~Dva~a~~~~~~~~~----~~~~-~i~~~~~~s~--------~e~~~~i~~~~g~~  267 (345)
T 2z1m_A          216 NAKRDWGYAPEYVEAMWLMMQQPE----PDDY-VIATGETHTV--------REFVEKAAKIAGFD  267 (345)
T ss_dssp             TCEECCEEHHHHHHHHHHHHTSSS----CCCE-EECCSCCEEH--------HHHHHHHHHHTTCC
T ss_pred             CceeeeEEHHHHHHHHHHHHhCCC----CceE-EEeCCCCccH--------HHHHHHHHHHhCCC
Confidence             0 013457899999999987543    2444 3444433332        55666666666654

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=99.89  E-value=9.9e-22  Score=182.42  Aligned_cols=261  Identities=13%  Similarity=0.019  Sum_probs=178.0

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcC
Q 019722           33 LSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLN  112 (336)
Q Consensus        33 l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  112 (336)
                      ++++++|||||+|+||++++++|+++|++|++++|+........+.+.   ...++.++++|+++++++.++++.+    
T Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~~~~----   79 (357)
T 1rkx_A            7 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETAR---VADGMQSEIGDIRDQNKLLESIREF----   79 (357)
T ss_dssp             HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTT---TTTTSEEEECCTTCHHHHHHHHHHH----
T ss_pred             hCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhc---cCCceEEEEccccCHHHHHHHHHhc----
Confidence            567999999999999999999999999999999998765444333332   1457899999999999999988765    


Q ss_pred             CCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccccccc
Q 019722          113 LPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQ  192 (336)
Q Consensus       113 ~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~~  192 (336)
                       ++|+||||||...  ...+.+++++.+++|+.++..+++++.+.   ..     .+++|++||.... +....    ..
T Consensus        80 -~~d~vih~A~~~~--~~~~~~~~~~~~~~n~~~~~~l~~a~~~~---~~-----~~~~v~~SS~~vy-g~~~~----~~  143 (357)
T 1rkx_A           80 -QPEIVFHMAAQPL--VRLSYSEPVETYSTNVMGTVYLLEAIRHV---GG-----VKAVVNITSDKCY-DNKEW----IW  143 (357)
T ss_dssp             -CCSEEEECCSCCC--HHHHHHCHHHHHHHHTHHHHHHHHHHHHH---CC-----CCEEEEECCGGGB-CCCCS----SS
T ss_pred             -CCCEEEECCCCcc--cccchhCHHHHHHHHHHHHHHHHHHHHHh---CC-----CCeEEEecCHHHh-CCCCc----CC
Confidence             6899999999632  12235677889999999999999998763   11     3699999997532 21110    00


Q ss_pred             ccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHc------cCCCcEEEEEeeCCceeCCCCCccchhHHHHHHHHHHh---
Q 019722          193 ISRNKSHYDATRAYALSKLANVLHTKELAQRLK------QMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSK---  263 (336)
Q Consensus       193 ~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~------~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~---  263 (336)
                      ...+.....+...|+.+|++.+.+++.++.++.      ..|  ++++.|+||.+.++...........+...+...   
T Consensus       144 ~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~g--i~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~g~~~  221 (357)
T 1rkx_A          144 GYRENEAMGGYDPYSNSKGCAELVTSSYRNSFFNPANYGQHG--TAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPV  221 (357)
T ss_dssp             CBCTTSCBCCSSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHC--CEEEEEECCCEECTTCCCSSCHHHHHHHHHHTTCCE
T ss_pred             CCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHhhhhccccCC--ceEEEEeeceeeCCCCCccccHHHHHHHHHhcCCCE
Confidence            011111234456899999999999999998874      335  999999999999986532222333333322211   


Q ss_pred             ---------hcCChHHHHHHHHHHHhcCc-cccCCceeeccCcc--cccccCCCCHHHHHHHHHHHHHhhccCCC
Q 019722          264 ---------LLKTIPQGAATTCYVAIHPR-LVNVSGKYFADCNE--AWTSKLGSNSNEASRLWAASELLVSRDPK  326 (336)
Q Consensus       264 ---------~~~~~~~~a~~~~~l~~~~~-~~~~~G~~~~~~~~--~~~~~~~~~~~~~~~~w~~~~~~~~~~~~  326 (336)
                               ....++|++.+++.++.... .....|..|+..+.  ...+-        .++.+.+.+.++....
T Consensus       222 ~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~~~~~~~~~~ni~~~~~~~~s~--------~e~~~~i~~~~g~~~~  288 (357)
T 1rkx_A          222 IIRNPHAIRPWQHVLEPLSGYLLLAQKLYTDGAEYAEGWNFGPNDADATPV--------KNIVEQMVKYWGEGAS  288 (357)
T ss_dssp             ECSCTTCEECCEETHHHHHHHHHHHHHHHHTCGGGCSEEECCCCGGGCEEH--------HHHHHHHHHHHCTTCC
T ss_pred             EECCCCCeeccEeHHHHHHHHHHHHHhhhhcCCCCCceEEECCCCCCcccH--------HHHHHHHHHHhCCCCc
Confidence                     11245788888888876311 00123455555542  33332        5666666677766543

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=99.89  E-value=1.2e-21  Score=181.51  Aligned_cols=255  Identities=14%  Similarity=0.040  Sum_probs=177.2

Q ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChH----HHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHH
Q 019722           32 NLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLK----AAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQ  107 (336)
Q Consensus        32 ~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~----~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~  107 (336)
                      +++++++|||||+|+||++++++|+++|++|++++|+..    .+..+.+.+... ...++.++.+|+++.+++.++++ 
T Consensus        24 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~-  101 (352)
T 1sb8_A           24 PAQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEK-QWSNFKFIQGDIRNLDDCNNACA-  101 (352)
T ss_dssp             HHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHH-HHTTEEEEECCTTSHHHHHHHHT-
T ss_pred             CccCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccc-cCCceEEEECCCCCHHHHHHHhc-
Confidence            357889999999999999999999999999999999753    233322222110 02478999999999998888775 


Q ss_pred             HHhcCCCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcc
Q 019722          108 FHSLNLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMI  187 (336)
Q Consensus       108 ~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~  187 (336)
                            ++|+||||||.....  .+.+++++.+++|+.++..+++++.+.    +     .+++|++||....... ...
T Consensus       102 ------~~d~vih~A~~~~~~--~~~~~~~~~~~~n~~~~~~l~~a~~~~----~-----~~~~v~~SS~~~~~~~-~~~  163 (352)
T 1sb8_A          102 ------GVDYVLHQAALGSVP--RSINDPITSNATNIDGFLNMLIAARDA----K-----VQSFTYAASSSTYGDH-PGL  163 (352)
T ss_dssp             ------TCSEEEECCSCCCHH--HHHHCHHHHHHHHTHHHHHHHHHHHHT----T-----CSEEEEEEEGGGGTTC-CCS
T ss_pred             ------CCCEEEECCcccCch--hhhhCHHHHHHHHHHHHHHHHHHHHHc----C-----CCEEEEeccHHhcCCC-CCC
Confidence                  699999999974321  134577889999999999999988753    2     3699999997653221 111


Q ss_pred             cccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCcc---chhHHHHHHHHHHh-
Q 019722          188 RYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRER---EGFITDLVFFLTSK-  263 (336)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~---~~~~~~~~~~~~~~-  263 (336)
                      ++     ++.....+...|+.+|++.+.+++.++.+.   +  ++++.|+||.+.++.....   ......+....... 
T Consensus       164 ~~-----~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---g--~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~  233 (352)
T 1sb8_A          164 PK-----VEDTIGKPLSPYAVTKYVNELYADVFSRCY---G--FSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGD  233 (352)
T ss_dssp             SB-----CTTCCCCCCSHHHHHHHHHHHHHHHHHHHH---C--CCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTC
T ss_pred             CC-----CCCCCCCCCChhHHHHHHHHHHHHHHHHHc---C--CCEEEEEECceeCcCCCCCcchhhHHHHHHHHHHCCC
Confidence            11     112223345689999999999999998875   4  9999999999999875432   12222232222211 


Q ss_pred             ------------hcCChHHHHHHHHHHHhcCccccCCceeeccCcccccccCCCCHHHHHHHHHHHHHhh---ccCCC
Q 019722          264 ------------LLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWTSKLGSNSNEASRLWAASELLV---SRDPK  326 (336)
Q Consensus       264 ------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~---~~~~~  326 (336)
                                  ....++|+|.+++.++..+  ....|+.|+.++....+-        .++.+.+.+.+   +....
T Consensus       234 ~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~~--~~~~~~~~ni~~~~~~s~--------~e~~~~i~~~~~~~g~~~~  301 (352)
T 1sb8_A          234 DVYINGDGETSRDFCYIENTVQANLLAATAG--LDARNQVYNIAVGGRTSL--------NQLFFALRDGLAENGVSYH  301 (352)
T ss_dssp             CCEEESSSCCEECCEEHHHHHHHHHHHHTCC--GGGCSEEEEESCSCCEEH--------HHHHHHHHHHHHHTTCCCC
T ss_pred             CcEEeCCCCceEeeEEHHHHHHHHHHHHhcc--ccCCCceEEeCCCCCccH--------HHHHHHHHHHHHhcCCCCC
Confidence                        1224688899998888742  224677777776655553        66666677777   65543

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=99.89  E-value=8e-22  Score=181.37  Aligned_cols=246  Identities=11%  Similarity=0.063  Sum_probs=172.9

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCC--CEEEEeeCChH--HHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRG--ARLVLPARSLK--AAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G--~~V~~~~r~~~--~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      +++++|||||+|+||++++++|+++|  ++|++++|+..  ..+. .+++.   ...++.++.+|+++.+++.+++.   
T Consensus         2 ~~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~-~~~~~---~~~~~~~~~~Dl~d~~~~~~~~~---   74 (336)
T 2hun_A            2 HSMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPAN-LKDLE---DDPRYTFVKGDVADYELVKELVR---   74 (336)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGG-GTTTT---TCTTEEEEECCTTCHHHHHHHHH---
T ss_pred             CCCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhH-Hhhhc---cCCceEEEEcCCCCHHHHHHHhh---
Confidence            45689999999999999999999997  89999998642  1111 11111   13578999999999999888873   


Q ss_pred             hcCCCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcccc
Q 019722          110 SLNLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRY  189 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~  189 (336)
                          ++|+||||||....  ..+.+++++.+++|+.++..+++++.+.  ..      .+++|++||.... +...... 
T Consensus        75 ----~~d~vih~A~~~~~--~~~~~~~~~~~~~Nv~g~~~l~~a~~~~--~~------~~~iv~~SS~~vy-g~~~~~~-  138 (336)
T 2hun_A           75 ----KVDGVVHLAAESHV--DRSISSPEIFLHSNVIGTYTLLESIRRE--NP------EVRFVHVSTDEVY-GDILKGS-  138 (336)
T ss_dssp             ----TCSEEEECCCCCCH--HHHHHCTHHHHHHHHHHHHHHHHHHHHH--CT------TSEEEEEEEGGGG-CCCSSSC-
T ss_pred             ----CCCEEEECCCCcCh--hhhhhCHHHHHHHHHHHHHHHHHHHHHh--CC------CcEEEEeccHHHH-CCCCCCC-
Confidence                79999999997532  1234567889999999999999999876  11      2699999996432 2111111 


Q ss_pred             cccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHHHHHHHH-------
Q 019722          190 LGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTS-------  262 (336)
Q Consensus       190 ~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~-------  262 (336)
                          .++.....+...|+.+|++.+.+++.++.++   +  ++++.|+||.+.++..... ............       
T Consensus       139 ----~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~--~~~~ilrp~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~  208 (336)
T 2hun_A          139 ----FTENDRLMPSSPYSATKAASDMLVLGWTRTY---N--LNASITRCTNNYGPYQFPE-KLIPKTIIRASLGLKIPIY  208 (336)
T ss_dssp             ----BCTTBCCCCCSHHHHHHHHHHHHHHHHHHHT---T--CEEEEEEECEEESTTCCTT-SHHHHHHHHHHTTCCEEEE
T ss_pred             ----cCCCCCCCCCCccHHHHHHHHHHHHHHHHHh---C--CCEEEEeeeeeeCcCCCcC-chHHHHHHHHHcCCCceEe
Confidence                1111223445689999999999999999875   4  9999999999999985431 222222222211       


Q ss_pred             ------hhcCChHHHHHHHHHHHhcCccccCCceeeccCcccccccCCCCHHHHHHHHHHHHHhhccC
Q 019722          263 ------KLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWTSKLGSNSNEASRLWAASELLVSRD  324 (336)
Q Consensus       263 ------~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~  324 (336)
                            .....++|+|.++++++..+    .+|+.|+.+++...+-        .++.+.+.+.++..
T Consensus       209 ~~~~~~~~~i~v~Dva~~~~~~~~~~----~~g~~~~v~~~~~~s~--------~e~~~~i~~~~g~~  264 (336)
T 2hun_A          209 GTGKNVRDWLYVEDHVRAIELVLLKG----ESREIYNISAGEEKTN--------LEVVKIILRLMGKG  264 (336)
T ss_dssp             TC---CEEEEEHHHHHHHHHHHHHHC----CTTCEEEECCSCEECH--------HHHHHHHHHHTTCC
T ss_pred             CCCCceeeeEEHHHHHHHHHHHHhCC----CCCCEEEeCCCCcccH--------HHHHHHHHHHhCCC
Confidence                  11234689999999988633    3688887777665553        66777777777764

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=99.89  E-value=2.2e-23  Score=183.10  Aligned_cols=192  Identities=15%  Similarity=0.079  Sum_probs=143.9

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCC--EEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHh
Q 019722           33 LSSVTAIITGATSGIGAETARVLAKRGA--RLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHS  110 (336)
Q Consensus        33 l~gk~~lItGgs~gIG~aia~~L~~~G~--~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  110 (336)
                      |++|++|||||+|+||++++++|+++|+  +|++++|++++.....        ..++.++.+|+++++++.++++    
T Consensus        16 m~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~--------~~~~~~~~~D~~d~~~~~~~~~----   83 (242)
T 2bka_A           16 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEA--------YKNVNQEVVDFEKLDDYASAFQ----   83 (242)
T ss_dssp             HTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGG--------GGGCEEEECCGGGGGGGGGGGS----
T ss_pred             hcCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccc--------cCCceEEecCcCCHHHHHHHhc----
Confidence            6789999999999999999999999999  9999999876432211        1368889999999988877654    


Q ss_pred             cCCCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccccc
Q 019722          111 LNLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYL  190 (336)
Q Consensus       111 ~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~  190 (336)
                         ++|+||||||....     ..++++.+++|+.++..+++++.+    .+     .++||++||..+...        
T Consensus        84 ---~~d~vi~~ag~~~~-----~~~~~~~~~~n~~~~~~~~~~~~~----~~-----~~~iv~~SS~~~~~~--------  138 (242)
T 2bka_A           84 ---GHDVGFCCLGTTRG-----KAGAEGFVRVDRDYVLKSAELAKA----GG-----CKHFNLLSSKGADKS--------  138 (242)
T ss_dssp             ---SCSEEEECCCCCHH-----HHHHHHHHHHHTHHHHHHHHHHHH----TT-----CCEEEEECCTTCCTT--------
T ss_pred             ---CCCEEEECCCcccc-----cCCcccceeeeHHHHHHHHHHHHH----CC-----CCEEEEEccCcCCCC--------
Confidence               79999999996432     245678999999999988887543    22     379999999765321        


Q ss_pred             ccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcE-EEEEeeCCceeCCCCCccchhHHHHHHH----HH----
Q 019722          191 GQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANV-TVNCVHPGIVRTRLTREREGFITDLVFF----LT----  261 (336)
Q Consensus       191 ~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I-~vn~v~PG~v~T~~~~~~~~~~~~~~~~----~~----  261 (336)
                                 ....|+.+|++++.+++.+       +  + +++.|+||++.|++.....  .......    .+    
T Consensus       139 -----------~~~~Y~~sK~~~e~~~~~~-------~--~~~~~~vrpg~v~~~~~~~~~--~~~~~~~~~~~~~~~~~  196 (242)
T 2bka_A          139 -----------SNFLYLQVKGEVEAKVEEL-------K--FDRYSVFRPGVLLCDRQESRP--GEWLVRKFFGSLPDSWA  196 (242)
T ss_dssp             -----------CSSHHHHHHHHHHHHHHTT-------C--CSEEEEEECCEEECTTGGGSH--HHHHHHHHHCSCCTTGG
T ss_pred             -----------CcchHHHHHHHHHHHHHhc-------C--CCCeEEEcCceecCCCCCCcH--HHHHHHHhhcccCcccc
Confidence                       2346999999999988753       3  6 8999999999999754311  1111111    11    


Q ss_pred             HhhcCChHHHHHHHHHHHhcCc
Q 019722          262 SKLLKTIPQGAATTCYVAIHPR  283 (336)
Q Consensus       262 ~~~~~~~~~~a~~~~~l~~~~~  283 (336)
                      ......++|+|.++++++..+.
T Consensus       197 ~~~~~~~~dva~~~~~~~~~~~  218 (242)
T 2bka_A          197 SGHSVPVVTVVRAMLNNVVRPR  218 (242)
T ss_dssp             GGTEEEHHHHHHHHHHHHTSCC
T ss_pred             CCcccCHHHHHHHHHHHHhCcc
Confidence            2234578999999999998554

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=99.89  E-value=4.5e-22  Score=183.95  Aligned_cols=256  Identities=13%  Similarity=0.022  Sum_probs=170.7

Q ss_pred             ccccccCCCCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHH
Q 019722           22 TAEQVTDGCPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSV  101 (336)
Q Consensus        22 ~~~~~~~~~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v  101 (336)
                      +++.+.....++++|++|||||+|+||.+++++|+++|++|++++|+...              .++.++.+|+++.+++
T Consensus         6 ~~~~~~~~~~~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~--------------~~~~~~~~Dl~d~~~~   71 (347)
T 4id9_A            6 HHHHHSSGLVPRGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG--------------TGGEEVVGSLEDGQAL   71 (347)
T ss_dssp             ---------------CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS--------------SCCSEEESCTTCHHHH
T ss_pred             cCCCCCCcccccCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC--------------CCccEEecCcCCHHHH
Confidence            44455555778999999999999999999999999999999999998653              3678899999999998


Q ss_pred             HHHHHHHHhcCCCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCcccc
Q 019722          102 RNFVSQFHSLNLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSW  181 (336)
Q Consensus       102 ~~~~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~  181 (336)
                      ..+++       ++|+|||+|+....    +...++..+++|+.++..+++++..    .+     .+++|++||... +
T Consensus        72 ~~~~~-------~~d~vih~A~~~~~----~~~~~~~~~~~nv~~~~~ll~a~~~----~~-----~~~~V~~SS~~v-y  130 (347)
T 4id9_A           72 SDAIM-------GVSAVLHLGAFMSW----APADRDRMFAVNVEGTRRLLDAASA----AG-----VRRFVFASSGEV-Y  130 (347)
T ss_dssp             HHHHT-------TCSEEEECCCCCCS----SGGGHHHHHHHHTHHHHHHHHHHHH----TT-----CSEEEEEEEGGG-T
T ss_pred             HHHHh-------CCCEEEECCcccCc----chhhHHHHHHHHHHHHHHHHHHHHH----cC-----CCeEEEECCHHH-h
Confidence            88775       79999999997543    3455689999999999999998754    22     369999999643 3


Q ss_pred             ccCCcccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCcee-------------CCCCCc
Q 019722          182 FSGDMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVR-------------TRLTRE  248 (336)
Q Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~-------------T~~~~~  248 (336)
                      +...   ....+..+.........|+.+|.+.+.+++.++.+.   +  ++++.|+|+.+.             ++....
T Consensus       131 g~~~---~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~--~~~~ilRp~~v~~~~~~~~~~~~~~Gp~~~~  202 (347)
T 4id9_A          131 PENR---PEFLPVTEDHPLCPNSPYGLTKLLGEELVRFHQRSG---A--METVILRFSHTQDATELLDEDSFFSGPRFFL  202 (347)
T ss_dssp             TTTS---CSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHS---S--SEEEEEEECEEECGGGTTCTTSSSHHHHHBH
T ss_pred             CCCC---CCCCCcCCCCCCCCCChHHHHHHHHHHHHHHHHHhc---C--CceEEEccceEeecccccccccccCCCCccc
Confidence            2100   001111222234456689999999999999998774   4  999999999998             332111


Q ss_pred             c----------chhHHHHHHHHHHhh-------------c----CChHHHHHHHHHHHhcCccccCCceeeccCcccccc
Q 019722          249 R----------EGFITDLVFFLTSKL-------------L----KTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWTS  301 (336)
Q Consensus       249 ~----------~~~~~~~~~~~~~~~-------------~----~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~~  301 (336)
                      .          ......+........             .    ..++|+|.+++.++..+..   .|+.|+.++....+
T Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~v~Dva~ai~~~~~~~~~---~~~~~ni~~~~~~s  279 (347)
T 4id9_A          203 RPRIHQQQNFGNAAIAELLQSRDIGEPSHILARNENGRPFRMHITDTRDMVAGILLALDHPEA---AGGTFNLGADEPAD  279 (347)
T ss_dssp             HHHHHHHHHHTCHHHHHHHHHHCCSSCCEEEEECTTCCBCEECEEEHHHHHHHHHHHHHCGGG---TTEEEEESCSSCEE
T ss_pred             ccccccccccchhHHHHHHHHHHcCCCeEEeCCCCcccCCccCcEeHHHHHHHHHHHhcCccc---CCCeEEECCCCccc
Confidence            0          111222222211110             1    4468999999999985532   47777777766555


Q ss_pred             cCCCCHHHHHHHHHHHHHhhccCCCCCCCC
Q 019722          302 KLGSNSNEASRLWAASELLVSRDPKSVFDP  331 (336)
Q Consensus       302 ~~~~~~~~~~~~w~~~~~~~~~~~~~~~~p  331 (336)
                      -        .++.+.+.+.++........|
T Consensus       280 ~--------~e~~~~i~~~~g~~~~~~~~p  301 (347)
T 4id9_A          280 F--------AALLPKIAALTGLPIVTVDFP  301 (347)
T ss_dssp             H--------HHHHHHHHHHHCCCEEEEECS
T ss_pred             H--------HHHHHHHHHHhCCCCceeeCC
Confidence            3        777777888888765544333

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=99.88  E-value=7.9e-22  Score=170.95  Aligned_cols=189  Identities=11%  Similarity=-0.002  Sum_probs=139.3

Q ss_pred             CCEEEEeCCCChHHHHHHHHHH-HCCCEEEEeeCChH-HHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcC
Q 019722           35 SVTAIITGATSGIGAETARVLA-KRGARLVLPARSLK-AAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLN  112 (336)
Q Consensus        35 gk~~lItGgs~gIG~aia~~L~-~~G~~V~~~~r~~~-~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  112 (336)
                      .|++|||||+|+||++++++|+ ++|++|++++|+++ +++++.    ..  ..++.++++|++|++++.++++      
T Consensus         5 mk~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~----~~--~~~~~~~~~D~~d~~~~~~~~~------   72 (221)
T 3r6d_A            5 YXYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEI----ID--HERVTVIEGSFQNPGXLEQAVT------   72 (221)
T ss_dssp             CSEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHH----HT--STTEEEEECCTTCHHHHHHHHT------
T ss_pred             EEEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhc----cC--CCceEEEECCCCCHHHHHHHHc------
Confidence            3789999999999999999999 89999999999987 655433    11  4689999999999999988875      


Q ss_pred             CCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccccccc
Q 019722          113 LPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQ  192 (336)
Q Consensus       113 ~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~~  192 (336)
                       ++|+||||||..                 |+.     ++.+++.+++.+     .++||++||..+...          
T Consensus        73 -~~d~vv~~ag~~-----------------n~~-----~~~~~~~~~~~~-----~~~iv~iSs~~~~~~----------  114 (221)
T 3r6d_A           73 -NAEVVFVGAMES-----------------GSD-----MASIVKALSRXN-----IRRVIGVSMAGLSGE----------  114 (221)
T ss_dssp             -TCSEEEESCCCC-----------------HHH-----HHHHHHHHHHTT-----CCEEEEEEETTTTSC----------
T ss_pred             -CCCEEEEcCCCC-----------------Chh-----HHHHHHHHHhcC-----CCeEEEEeeceecCC----------
Confidence             689999999953                 322     788888888765     479999999876543          


Q ss_pred             ccCCCCCCChhh----------HhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCC-CCCccchhHHHHHHHHH
Q 019722          193 ISRNKSHYDATR----------AYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTR-LTREREGFITDLVFFLT  261 (336)
Q Consensus       193 ~~~~~~~~~~~~----------~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~-~~~~~~~~~~~~~~~~~  261 (336)
                             .+...          .|+.+|.+++.+++.       .+  |+++.|+||++.++ ...........   ...
T Consensus       115 -------~~~~~~~~~~~~~~~~y~~~K~~~e~~~~~-------~~--i~~~~vrpg~v~~~~~~~~~~~~~~~---~~~  175 (221)
T 3r6d_A          115 -------FPVALEKWTFDNLPISYVQGERQARNVLRE-------SN--LNYTILRLTWLYNDPEXTDYELIPEG---AQF  175 (221)
T ss_dssp             -------SCHHHHHHHHHTSCHHHHHHHHHHHHHHHH-------SC--SEEEEEEECEEECCTTCCCCEEECTT---SCC
T ss_pred             -------CCcccccccccccccHHHHHHHHHHHHHHh-------CC--CCEEEEechhhcCCCCCcceeeccCC---ccC
Confidence                   22222          799999999987753       35  99999999999988 33222110000   000


Q ss_pred             HhhcCChHHHHHHHHHHH--hcCccccCCceeec
Q 019722          262 SKLLKTIPQGAATTCYVA--IHPRLVNVSGKYFA  293 (336)
Q Consensus       262 ~~~~~~~~~~a~~~~~l~--~~~~~~~~~G~~~~  293 (336)
                      .....+++|+|..+++++  ..+ ..++++.+..
T Consensus       176 ~~~~~~~~dvA~~~~~l~~~~~~-~~~~~~~~~i  208 (221)
T 3r6d_A          176 NDAQVSREAVVKAIFDILHAADE-TPFHRTSIGV  208 (221)
T ss_dssp             CCCEEEHHHHHHHHHHHHTCSCC-GGGTTEEEEE
T ss_pred             CCceeeHHHHHHHHHHHHHhcCh-hhhhcceeee
Confidence            112456799999999999  744 4565554443

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=99.88  E-value=7e-22  Score=179.86  Aligned_cols=247  Identities=16%  Similarity=0.112  Sum_probs=175.2

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCCCc
Q 019722           36 VTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLPL  115 (336)
Q Consensus        36 k~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i  115 (336)
                      +++|||||+|+||++++++|+++|++|++++|+.+......        ..++.++.+|+++.+ +.++++       . 
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~--------~~~~~~~~~Dl~d~~-~~~~~~-------~-   63 (312)
T 3ko8_A            1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREFV--------NPSAELHVRDLKDYS-WGAGIK-------G-   63 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCGGGS--------CTTSEEECCCTTSTT-TTTTCC-------C-
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCchhhc--------CCCceEEECccccHH-HHhhcC-------C-
Confidence            47999999999999999999999999999999865432211        357899999999987 554432       3 


Q ss_pred             cEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcccccccccC
Q 019722          116 NLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISR  195 (336)
Q Consensus       116 d~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~~~~~  195 (336)
                      |+||||||....  ..+.++++..+++|+.++..+++++...    +     .+++|++||.... +......     .+
T Consensus        64 d~vih~A~~~~~--~~~~~~~~~~~~~n~~~~~~l~~a~~~~----~-----~~~iv~~SS~~vy-g~~~~~~-----~~  126 (312)
T 3ko8_A           64 DVVFHFAANPEV--RLSTTEPIVHFNENVVATFNVLEWARQT----G-----VRTVVFASSSTVY-GDADVIP-----TP  126 (312)
T ss_dssp             SEEEECCSSCSS--SGGGSCHHHHHHHHHHHHHHHHHHHHHH----T-----CCEEEEEEEGGGG-CSCSSSS-----BC
T ss_pred             CEEEECCCCCCc--hhhhhCHHHHHHHHHHHHHHHHHHHHHc----C-----CCEEEEeCcHHHh-CCCCCCC-----CC
Confidence            999999995432  3456778899999999999999988432    2     3699999996543 2211111     11


Q ss_pred             CCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHHHHHHHHh-----h------
Q 019722          196 NKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSK-----L------  264 (336)
Q Consensus       196 ~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~-----~------  264 (336)
                      +.....+...|+.+|++.+.+++.++.++   |  ++++.|+||.+.++....  .............     .      
T Consensus       127 e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~---g--~~~~~lrp~~v~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~g~~  199 (312)
T 3ko8_A          127 EEEPYKPISVYGAAKAAGEVMCATYARLF---G--VRCLAVRYANVVGPRLRH--GVIYDFIMKLRRNPNVLEVLGDGTQ  199 (312)
T ss_dssp             TTSCCCCCSHHHHHHHHHHHHHHHHHHHH---C--CEEEEEEECEEECTTCCS--SHHHHHHHHHHHCTTEEEEC----C
T ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHHHHh---C--CCEEEEeeccccCcCCCC--ChHHHHHHHHHhCCCCeEEcCCCCe
Confidence            22234456789999999999999999886   4  999999999999997554  2222222222211     1      


Q ss_pred             ---cCChHHHHHHHHHHHhcCccccCCceeeccCcccccccCCCCHHHHHHHHHHHHHhhccCCCCCCCC
Q 019722          265 ---LKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWTSKLGSNSNEASRLWAASELLVSRDPKSVFDP  331 (336)
Q Consensus       265 ---~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~p  331 (336)
                         ...++|+|.+++.++..+......|..|+..+....+.        .++.+.+.+.++..+...+.|
T Consensus       200 ~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~ni~~~~~~s~--------~e~~~~i~~~~g~~~~~~~~~  261 (312)
T 3ko8_A          200 RKSYLYVRDAVEATLAAWKKFEEMDAPFLALNVGNVDAVRV--------LDIAQIVAEVLGLRPEIRLVP  261 (312)
T ss_dssp             EECEEEHHHHHHHHHHHHHHHHHSCCSEEEEEESCSSCEEH--------HHHHHHHHHHHTCCCEEEEC-
T ss_pred             EEeeEEHHHHHHHHHHHHHhccccCCCCcEEEEcCCCceeH--------HHHHHHHHHHhCCCCceeecC
Confidence               12378999999999875332344678887777665553        777777778887766555433

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=99.88  E-value=3.1e-22  Score=176.32  Aligned_cols=214  Identities=14%  Similarity=0.037  Sum_probs=151.2

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHC--CCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHh
Q 019722           33 LSSVTAIITGATSGIGAETARVLAKR--GARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHS  110 (336)
Q Consensus        33 l~gk~~lItGgs~gIG~aia~~L~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  110 (336)
                      +++|++|||||+|+||++++++|+++  |++|++++|++++.++.         ..++.++.+|+++++++.++++    
T Consensus         2 ~~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~---------~~~~~~~~~D~~d~~~~~~~~~----   68 (253)
T 1xq6_A            2 ANLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI---------GGEADVFIGDITDADSINPAFQ----   68 (253)
T ss_dssp             CSCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHT---------TCCTTEEECCTTSHHHHHHHHT----
T ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhc---------CCCeeEEEecCCCHHHHHHHHc----
Confidence            56799999999999999999999999  89999999997665432         2467889999999999988875    


Q ss_pred             cCCCccEEEEcccCCCCC-----------CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCcc
Q 019722          111 LNLPLNLLINNAGKFAHQ-----------HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIH  179 (336)
Q Consensus       111 ~~~~id~lv~nAg~~~~~-----------~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~  179 (336)
                         .+|+||||||.....           .+...+.+++.+++|+.++..+++++...    +     .++||++||..+
T Consensus        69 ---~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~-----~~~iv~~SS~~~  136 (253)
T 1xq6_A           69 ---GIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVA----G-----VKHIVVVGSMGG  136 (253)
T ss_dssp             ---TCSEEEECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHH----T-----CSEEEEEEETTT
T ss_pred             ---CCCEEEEeccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHc----C-----CCEEEEEcCccC
Confidence               589999999975321           12223455678999999999888877543    2     369999999865


Q ss_pred             ccccCCcccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccc---hhHHHH
Q 019722          180 SWFSGDMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRERE---GFITDL  256 (336)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~---~~~~~~  256 (336)
                      ........            ......|+.+|++++.+++.       .+  ++++.|+||.+.++......   ......
T Consensus       137 ~~~~~~~~------------~~~~~~y~~sK~~~e~~~~~-------~~--i~~~~vrpg~v~~~~~~~~~~~~~~~~~~  195 (253)
T 1xq6_A          137 TNPDHPLN------------KLGNGNILVWKRKAEQYLAD-------SG--TPYTIIRAGGLLDKEGGVRELLVGKDDEL  195 (253)
T ss_dssp             TCTTCGGG------------GGGGCCHHHHHHHHHHHHHT-------SS--SCEEEEEECEEECSCSSSSCEEEESTTGG
T ss_pred             CCCCCccc------------cccchhHHHHHHHHHHHHHh-------CC--CceEEEecceeecCCcchhhhhccCCcCC
Confidence            32210000            01113478899999987753       35  99999999999988643211   100000


Q ss_pred             HHHHHHhhcCChHHHHHHHHHHHhcCccccCCceeeccCcc
Q 019722          257 VFFLTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNE  297 (336)
Q Consensus       257 ~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~  297 (336)
                      ..  .......++|+|..+++++..+.   ..|+.|..++.
T Consensus       196 ~~--~~~~~~~~~Dva~~~~~~~~~~~---~~g~~~~i~~~  231 (253)
T 1xq6_A          196 LQ--TDTKTVPRADVAEVCIQALLFEE---AKNKAFDLGSK  231 (253)
T ss_dssp             GG--SSCCEEEHHHHHHHHHHHTTCGG---GTTEEEEEEEC
T ss_pred             cC--CCCcEEcHHHHHHHHHHHHcCcc---ccCCEEEecCC
Confidence            00  01224578999999999987543   36777777664

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=99.88  E-value=1.8e-21  Score=177.32  Aligned_cols=247  Identities=14%  Similarity=0.098  Sum_probs=170.9

Q ss_pred             EEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCCCcc
Q 019722           37 TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLPLN  116 (336)
Q Consensus        37 ~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id  116 (336)
                      ++|||||+|+||++++++|+++|++|++++|.......   .+     ..++.++++|+++++++.+++++.     ++|
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~---~~-----~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d   68 (311)
T 2p5y_A            2 RVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKRE---NV-----PKGVPFFRVDLRDKEGVERAFREF-----RPT   68 (311)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEECCCSSCCGG---GS-----CTTCCEECCCTTCHHHHHHHHHHH-----CCS
T ss_pred             EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCCcCchh---hc-----ccCeEEEECCCCCHHHHHHHHHhc-----CCC
Confidence            68999999999999999999999999999985321110   01     235778899999999998888752     689


Q ss_pred             EEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCcccccc-CCcccccccccC
Q 019722          117 LLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFS-GDMIRYLGQISR  195 (336)
Q Consensus       117 ~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~-~~~~~~~~~~~~  195 (336)
                      ++||+|+....  ..+.++++..+++|+.+++.+++++..    .+     .+++|++||.++.++. ....+.     .
T Consensus        69 ~vi~~a~~~~~--~~~~~~~~~~~~~N~~g~~~l~~a~~~----~~-----~~~iv~~SS~~~~~g~~~~~~~~-----~  132 (311)
T 2p5y_A           69 HVSHQAAQASV--KVSVEDPVLDFEVNLLGGLNLLEACRQ----YG-----VEKLVFASTGGAIYGEVPEGERA-----E  132 (311)
T ss_dssp             EEEECCSCCCH--HHHHHCHHHHHHHHTHHHHHHHHHHHH----TT-----CSEEEEEEEHHHHHCCCCTTCCB-----C
T ss_pred             EEEECccccCc--hhhhhCHHHHHHHHHHHHHHHHHHHHH----hC-----CCEEEEeCCChhhcCCCCCCCCc-----C
Confidence            99999996432  123466788999999999999998753    22     3699999997444432 111111     1


Q ss_pred             CCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccc--hhHHHHHHHHHHh----------
Q 019722          196 NKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRERE--GFITDLVFFLTSK----------  263 (336)
Q Consensus       196 ~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~--~~~~~~~~~~~~~----------  263 (336)
                      +.....+...|+.+|++.+.+++.++.+.   +  ++++.|+|+.+.++......  .....+.......          
T Consensus       133 E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~--~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  207 (311)
T 2p5y_A          133 ETWPPRPKSPYAASKAAFEHYLSVYGQSY---G--LKWVSLRYGNVYGPRQDPHGEAGVVAIFAERVLKGLPVTLYARKT  207 (311)
T ss_dssp             TTSCCCCCSHHHHHHHHHHHHHHHHHHHH---C--CCEEEEEECEEECTTCCSSSTTHHHHHHHHHHHHTCCEEEECSSS
T ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHHHHc---C--CCEEEEeeccccCcCCCCCCcCcHHHHHHHHHHcCCCcEEEeccc
Confidence            11123345689999999999999998875   4  99999999999998754321  2222222222111          


Q ss_pred             --------hcCChHHHHHHHHHHHhcCccccCCceeeccCcccccccCCCCHHHHHHHHHHHHHhhccCCCCCCCC
Q 019722          264 --------LLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWTSKLGSNSNEASRLWAASELLVSRDPKSVFDP  331 (336)
Q Consensus       264 --------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~p  331 (336)
                              ....++|+|.++++++..+      |+.|+.+++...+-        .++.+.+.+.++...+..+.|
T Consensus       208 ~~~g~~~~~~i~v~Dva~a~~~~~~~~------~~~~~i~~~~~~s~--------~e~~~~i~~~~g~~~~~~~~~  269 (311)
T 2p5y_A          208 PGDEGCVRDYVYVGDVAEAHALALFSL------EGIYNVGTGEGHTT--------REVLMAVAEAAGKAPEVQPAP  269 (311)
T ss_dssp             TTSCCCEECEEEHHHHHHHHHHHHHHC------CEEEEESCSCCEEH--------HHHHHHHHHHHTCCCCEEEEC
T ss_pred             CCCCCeEEeeEEHHHHHHHHHHHHhCC------CCEEEeCCCCCccH--------HHHHHHHHHHhCCCCCceeCC
Confidence                    1123688999999988742      66776766655543        667777777777655444433

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=99.88  E-value=2e-20  Score=176.30  Aligned_cols=261  Identities=13%  Similarity=0.089  Sum_probs=171.1

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHH----------------HHHHHHhhCCCCceEEEeccCC
Q 019722           33 LSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEE----------------AKARLASDCPGSDIVVLPLDLS   96 (336)
Q Consensus        33 l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~----------------~~~~l~~~~~~~~~~~~~~Dl~   96 (336)
                      .++.++|||||+|.||++++++|+++|++|++++|+.....+                ....+.... +.++.++.+|++
T Consensus         9 ~~~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~v~~~~~Dl~   87 (404)
T 1i24_A            9 HHGSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALT-GKSIELYVGDIC   87 (404)
T ss_dssp             ---CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHH-CCCCEEEESCTT
T ss_pred             cCCCeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEecCccccccccccccccccchhhhhhhhHhhcc-CCceEEEECCCC
Confidence            578899999999999999999999999999999987543211                112211111 357899999999


Q ss_pred             CHHHHHHHHHHHHhcCCCccEEEEcccCCCCC-CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEc
Q 019722           97 SLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQ-HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVS  175 (336)
Q Consensus        97 ~~~~v~~~~~~~~~~~~~id~lv~nAg~~~~~-~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vs  175 (336)
                      +++++.++++..     ++|+||||||..... ...+++.+...+++|+.++..+++++.+...        ..++|++|
T Consensus        88 d~~~~~~~~~~~-----~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~--------~~~~V~~S  154 (404)
T 1i24_A           88 DFEFLAESFKSF-----EPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGE--------ECHLVKLG  154 (404)
T ss_dssp             SHHHHHHHHHHH-----CCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCT--------TCEEEEEC
T ss_pred             CHHHHHHHHhcc-----CCCEEEECCCCCCccchhhCccchhhhHHHHHHHHHHHHHHHHHhCC--------CcEEEEeC
Confidence            999999888765     699999999975432 1224455677999999999999998865310        14999999


Q ss_pred             CCccccccCCcccccccc---------cCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCC
Q 019722          176 SSIHSWFSGDMIRYLGQI---------SRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLT  246 (336)
Q Consensus       176 S~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~  246 (336)
                      |.+. ++... .++.+..         ............|+.||++.+.+++.++.++   |  ++++.|+||.|.++..
T Consensus       155 S~~v-yg~~~-~~~~E~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---g--i~~~ivrp~~v~Gp~~  227 (404)
T 1i24_A          155 TMGE-YGTPN-IDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---G--IRATDLNQGVVYGVKT  227 (404)
T ss_dssp             CGGG-GCCCS-SCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHH---C--CEEEEEEECEEECSCC
T ss_pred             cHHH-hCCCC-CCCCccccccccccccccccCCCCCCChhHHHHHHHHHHHHHHHHhc---C--CeEEEEecceeeCCCC
Confidence            9643 33211 1111100         0000113345679999999999999998876   4  9999999999999864


Q ss_pred             Ccc----------------chhHHHHHHHHHHh-------------hcCChHHHHHHHHHHHhcCccccCCc--eeeccC
Q 019722          247 RER----------------EGFITDLVFFLTSK-------------LLKTIPQGAATTCYVAIHPRLVNVSG--KYFADC  295 (336)
Q Consensus       247 ~~~----------------~~~~~~~~~~~~~~-------------~~~~~~~~a~~~~~l~~~~~~~~~~G--~~~~~~  295 (336)
                      ...                ......+.......             ....++|+|.+++.++..+..   .|  +.|+..
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~a~~~~l~~~~~---~g~~~~yni~  304 (404)
T 1i24_A          228 DETEMHEELRNRLDYDAVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAK---AGEFRVFNQF  304 (404)
T ss_dssp             TTGGGSGGGCCCCCCSTTTCCHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSCCC---TTCEEEEEEC
T ss_pred             CccccccccccccccccchhhHHHHHHHHHHcCCeeEEeCCCCceECcEEHHHHHHHHHHHHhCccc---CCCceEEEEC
Confidence            320                11233333322211             112368889999998875432   35  566666


Q ss_pred             cccccccCCCCHHHHHHHHHHHHHh---hccCCC
Q 019722          296 NEAWTSKLGSNSNEASRLWAASELL---VSRDPK  326 (336)
Q Consensus       296 ~~~~~~~~~~~~~~~~~~w~~~~~~---~~~~~~  326 (336)
                      + ...+-        .++.+.+.+.   ++....
T Consensus       305 ~-~~~s~--------~e~~~~i~~~~~~~g~~~~  329 (404)
T 1i24_A          305 T-EQFSV--------NELASLVTKAGSKLGLDVK  329 (404)
T ss_dssp             S-EEEEH--------HHHHHHHHHHHHTTTCCCC
T ss_pred             C-CCCcH--------HHHHHHHHHHHHhhCCCcc
Confidence            5 44442        5556666555   555443

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=99.88  E-value=1.5e-21  Score=181.58  Aligned_cols=254  Identities=14%  Similarity=0.080  Sum_probs=172.5

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHH--CCCEEEEeeCChHHHHHH---H---HHHHhhCCCCceEEEeccCCCHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAK--RGARLVLPARSLKAAEEA---K---ARLASDCPGSDIVVLPLDLSSLSSV  101 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~--~G~~V~~~~r~~~~~~~~---~---~~l~~~~~~~~~~~~~~Dl~~~~~v  101 (336)
                      .++++++++|||||+|+||++++++|++  +|++|++++|+.......   .   .... ...+.++.++.+|+++++++
T Consensus         5 ~~~~~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~Dl~d~~~~   83 (362)
T 3sxp_A            5 DDELENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFK-NLIGFKGEVIAADINNPLDL   83 (362)
T ss_dssp             SCCCTTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGG-GGTTCCSEEEECCTTCHHHH
T ss_pred             chhcCCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhh-hccccCceEEECCCCCHHHH
Confidence            3578999999999999999999999999  999999999976411100   0   0001 11245789999999999998


Q ss_pred             HHHHHHHHhcCCCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCcccc
Q 019722          102 RNFVSQFHSLNLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSW  181 (336)
Q Consensus       102 ~~~~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~  181 (336)
                      ..+      ...++|+||||||....    +.++++..+++|+.++..+++++..    .      ++++|++||. +.+
T Consensus        84 ~~~------~~~~~D~vih~A~~~~~----~~~~~~~~~~~Nv~gt~~ll~aa~~----~------~~~~V~~SS~-~vy  142 (362)
T 3sxp_A           84 RRL------EKLHFDYLFHQAAVSDT----TMLNQELVMKTNYQAFLNLLEIARS----K------KAKVIYASSA-GVY  142 (362)
T ss_dssp             HHH------TTSCCSEEEECCCCCGG----GCCCHHHHHHHHTHHHHHHHHHHHH----T------TCEEEEEEEG-GGG
T ss_pred             HHh------hccCCCEEEECCccCCc----cccCHHHHHHHHHHHHHHHHHHHHH----c------CCcEEEeCcH-HHh
Confidence            887      23589999999996432    5577889999999999999998832    2      3579999994 333


Q ss_pred             ccCCcccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccc---hhHHHHHH
Q 019722          182 FSGDMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRERE---GFITDLVF  258 (336)
Q Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~---~~~~~~~~  258 (336)
                      +.... .+     ++.....+...|+.+|++.+.+++.++.+       +++..|.|+.+.++......   .....+..
T Consensus       143 g~~~~-~~-----~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~-------~~~~~lR~~~v~Gp~~~~~~~~~~~~~~~~~  209 (362)
T 3sxp_A          143 GNTKA-PN-----VVGKNESPENVYGFSKLCMDEFVLSHSND-------NVQVGLRYFNVYGPREFYKEKTASMVLQLAL  209 (362)
T ss_dssp             CSCCS-SB-----CTTSCCCCSSHHHHHHHHHHHHHHHTTTT-------SCEEEEEECSEESTTCGGGGGGSCHHHHHHH
T ss_pred             CCCCC-CC-----CCCCCCCCCChhHHHHHHHHHHHHHHhcc-------CCEEEEEeCceeCcCCCCCCcchhHHHHHHH
Confidence            32211 11     11222344567999999999999987755       56777888888777544321   22333333


Q ss_pred             HHHHh-------------hcCChHHHHHHHHHHHhcCccccCCceeeccCcccccccCCCCHHHHHHHHHHHHHhhccCC
Q 019722          259 FLTSK-------------LLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWTSKLGSNSNEASRLWAASELLVSRDP  325 (336)
Q Consensus       259 ~~~~~-------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~  325 (336)
                      .....             ....++|+|.++++++..+.    +| .|+.+++...+-        .++.+.+.+.++ ..
T Consensus       210 ~~~~~~~~~~~~~g~~~~~~i~v~Dva~ai~~~~~~~~----~g-~~~i~~~~~~s~--------~e~~~~i~~~~g-~~  275 (362)
T 3sxp_A          210 GAMAFKEVKLFEFGEQLRDFVYIEDVIQANVKAMKAQK----SG-VYNVGYSQARSY--------NEIVSILKEHLG-DF  275 (362)
T ss_dssp             HHHTTSEEECSGGGCCEEECEEHHHHHHHHHHHTTCSS----CE-EEEESCSCEEEH--------HHHHHHHHHHHC-CC
T ss_pred             HHHhCCCeEEECCCCeEEccEEHHHHHHHHHHHHhcCC----CC-EEEeCCCCCccH--------HHHHHHHHHHcC-CC
Confidence            22211             01237899999999987442    57 666666555553        677777778877 55


Q ss_pred             CCCCCCC
Q 019722          326 KSVFDPL  332 (336)
Q Consensus       326 ~~~~~p~  332 (336)
                      +..+.|.
T Consensus       276 ~~~~~~~  282 (362)
T 3sxp_A          276 KVTYIKN  282 (362)
T ss_dssp             EEECCC-
T ss_pred             ceEECCC
Confidence            5445553

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=99.88  E-value=2.5e-21  Score=179.81  Aligned_cols=258  Identities=12%  Similarity=0.039  Sum_probs=172.9

Q ss_pred             EEEEeCCCChHHHHHHHHHHHC-CCEEEEeeCChH--HHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCC
Q 019722           37 TAIITGATSGIGAETARVLAKR-GARLVLPARSLK--AAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNL  113 (336)
Q Consensus        37 ~~lItGgs~gIG~aia~~L~~~-G~~V~~~~r~~~--~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  113 (336)
                      ++|||||+|+||++++++|+++ |++|++++|+..  ..+. .+++.   .+.++.++.+|+++++++.+++++.     
T Consensus         2 kvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~-~~~~~---~~~~~~~~~~Dl~d~~~~~~~~~~~-----   72 (361)
T 1kew_A            2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLES-LSDIS---ESNRYNFEHADICDSAEITRIFEQY-----   72 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGG-GTTTT---TCTTEEEEECCTTCHHHHHHHHHHH-----
T ss_pred             EEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhh-hhhhh---cCCCeEEEECCCCCHHHHHHHHhhc-----
Confidence            4999999999999999999998 799999998642  1111 11111   1357899999999999999988752     


Q ss_pred             CccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCC-cc---cc
Q 019722          114 PLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGD-MI---RY  189 (336)
Q Consensus       114 ~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~-~~---~~  189 (336)
                      ++|+||||||....  ..+.+++++.+++|+.++..+++++.+.|...+...+.+++||++||....-.... ..   ..
T Consensus        73 ~~d~vih~A~~~~~--~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~~  150 (361)
T 1kew_A           73 QPDAVMHLAAESHV--DRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSV  150 (361)
T ss_dssp             CCSEEEECCSCCCH--HHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTS
T ss_pred             CCCEEEECCCCcCh--hhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEEeCCHHHhCCCcccccccccc
Confidence            79999999997532  22346778899999999999999999987531000000259999999643211100 00   00


Q ss_pred             cccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHHHHHHHHh------
Q 019722          190 LGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSK------  263 (336)
Q Consensus       190 ~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~------  263 (336)
                      +....++.....+...|+.+|++.+.+++.++.++   +  ++++.|+||.+.++..... .............      
T Consensus       151 ~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---g--i~~~~vrp~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~  224 (361)
T 1kew_A          151 TLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTY---G--LPTIVTNCSNNYGPYHFPE-KLIPLVILNALEGKPLPIY  224 (361)
T ss_dssp             CCCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---C--CCEEEEEECEEESTTCCTT-SHHHHHHHHHHHTCCEEEE
T ss_pred             cCCCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHh---C--CcEEEEeeceeECCCCCcc-cHHHHHHHHHHcCCCceEc
Confidence            00011122224456689999999999999999876   4  9999999999999986431 1222222222211      


Q ss_pred             -------hcCChHHHHHHHHHHHhcCccccCCceeeccCcccccccCCCCHHHHHHHHHHHHHhhcc
Q 019722          264 -------LLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWTSKLGSNSNEASRLWAASELLVSR  323 (336)
Q Consensus       264 -------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~  323 (336)
                             ....++|+|.++++++..+    .+|+.|+.+++...+.        .++.+.+.+.++.
T Consensus       225 ~~~~~~~~~i~v~Dva~a~~~~~~~~----~~g~~~~v~~~~~~s~--------~e~~~~i~~~~g~  279 (361)
T 1kew_A          225 GKGDQIRDWLYVEDHARALHMVVTEG----KAGETYNIGGHNEKKN--------LDVVFTICDLLDE  279 (361)
T ss_dssp             TTSCCEEEEEEHHHHHHHHHHHHHHC----CTTCEEEECCCCEEEH--------HHHHHHHHHHHHH
T ss_pred             CCCceeEeeEEHHHHHHHHHHHHhCC----CCCCEEEecCCCeeeH--------HHHHHHHHHHhCC
Confidence                   1234789999999998743    3688887777655442        4444555555543

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=99.87  E-value=1.9e-21  Score=180.06  Aligned_cols=253  Identities=13%  Similarity=0.011  Sum_probs=180.3

Q ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCC---CceEEEeccCCCHHHHHHHHHHH
Q 019722           32 NLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPG---SDIVVLPLDLSSLSSVRNFVSQF  108 (336)
Q Consensus        32 ~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~---~~~~~~~~Dl~~~~~v~~~~~~~  108 (336)
                      .++++++|||||+|+||++++++|+++|++|++++|+..........+....+.   .++.++.+|++|++++.++++  
T Consensus        22 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--   99 (351)
T 3ruf_A           22 IFSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMK--   99 (351)
T ss_dssp             HHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTT--
T ss_pred             CCCCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhc--
Confidence            457899999999999999999999999999999999765444444444432111   589999999999998888775  


Q ss_pred             HhcCCCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccc
Q 019722          109 HSLNLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIR  188 (336)
Q Consensus       109 ~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~  188 (336)
                           ++|+|||+||.....  ...+++...+++|+.++..+++++...    +     .+++|++||.... +.....+
T Consensus       100 -----~~d~Vih~A~~~~~~--~~~~~~~~~~~~nv~~~~~ll~a~~~~----~-----~~~~v~~SS~~vy-g~~~~~~  162 (351)
T 3ruf_A          100 -----GVDHVLHQAALGSVP--RSIVDPITTNATNITGFLNILHAAKNA----Q-----VQSFTYAASSSTY-GDHPALP  162 (351)
T ss_dssp             -----TCSEEEECCCCCCHH--HHHHCHHHHHHHHTHHHHHHHHHHHHT----T-----CSEEEEEEEGGGG-TTCCCSS
T ss_pred             -----CCCEEEECCccCCcc--hhhhCHHHHHHHHHHHHHHHHHHHHHc----C-----CCEEEEEecHHhc-CCCCCCC
Confidence                 799999999964321  234567789999999999999887543    1     3599999997543 2211111


Q ss_pred             ccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccc---hhHHHHHHHHHHhh-
Q 019722          189 YLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRERE---GFITDLVFFLTSKL-  264 (336)
Q Consensus       189 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~---~~~~~~~~~~~~~~-  264 (336)
                      +     ++.....+...|+.+|.+.+.+++.++.+.   |  ++++.++|+.+.++......   .....+........ 
T Consensus       163 ~-----~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---g--~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~  232 (351)
T 3ruf_A          163 K-----VEENIGNPLSPYAVTKYVNEIYAQVYARTY---G--FKTIGLRYFNVFGRRQDPNGAYAAVIPKWTAAMLKGDD  232 (351)
T ss_dssp             B-----CTTCCCCCCSHHHHHHHHHHHHHHHHHHHH---C--CCCEEEEECSEESTTCCCCSTTCCHHHHHHHHHHHTCC
T ss_pred             C-----ccCCCCCCCChhHHHHHHHHHHHHHHHHHh---C--CCEEEEeeCceeCcCCCCCcchhhHHHHHHHHHHcCCC
Confidence            1     122223445689999999999999998875   4  99999999999988654321   22333333332211 


Q ss_pred             ------------cCChHHHHHHHHHHHhcCccccCCceeeccCcccccccCCCCHHHHHHHHHHHHHhhcc
Q 019722          265 ------------LKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWTSKLGSNSNEASRLWAASELLVSR  323 (336)
Q Consensus       265 ------------~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~  323 (336)
                                  ...++|+|.+++.++..+  ....|+.|+..+....+-        .++++.+.+.++.
T Consensus       233 ~~~~g~g~~~~~~i~v~Dva~a~~~~~~~~--~~~~~~~~ni~~~~~~s~--------~e~~~~i~~~~g~  293 (351)
T 3ruf_A          233 VYINGDGETSRDFCYIDNVIQMNILSALAK--DSAKDNIYNVAVGDRTTL--------NELSGYIYDELNL  293 (351)
T ss_dssp             CEEESSSCCEECCEEHHHHHHHHHHHHTCC--GGGCSEEEEESCSCCEEH--------HHHHHHHHHHHHT
T ss_pred             cEEeCCCCeEEeeEEHHHHHHHHHHHHhhc--cccCCCEEEeCCCCcccH--------HHHHHHHHHHhCc
Confidence                        123688899999888752  224678887777665553        7777777788877

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=99.87  E-value=2.5e-21  Score=178.84  Aligned_cols=256  Identities=12%  Similarity=0.061  Sum_probs=172.6

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCC--CEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRG--ARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQ  107 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G--~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~  107 (336)
                      +++++++++|||||+|+||.+++++|+++|  ++|+..+|.....  ....+.......++.++.+|++|++++..+++.
T Consensus        19 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~--~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~   96 (346)
T 4egb_A           19 YFQSNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSG--NLNNVKSIQDHPNYYFVKGEIQNGELLEHVIKE   96 (346)
T ss_dssp             -----CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTC--CGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHH
T ss_pred             ccccCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEecccccc--chhhhhhhccCCCeEEEEcCCCCHHHHHHHHhh
Confidence            456788999999999999999999999999  6788877764211  111222222245899999999999999999886


Q ss_pred             HHhcCCCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcc
Q 019722          108 FHSLNLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMI  187 (336)
Q Consensus       108 ~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~  187 (336)
                      .     ++|+|||+||.....  ...++++..+++|+.++..+++++...    +     .+++|++||...........
T Consensus        97 ~-----~~d~Vih~A~~~~~~--~~~~~~~~~~~~nv~~~~~ll~a~~~~----~-----~~~~v~~SS~~vy~~~~~~~  160 (346)
T 4egb_A           97 R-----DVQVIVNFAAESHVD--RSIENPIPFYDTNVIGTVTLLELVKKY----P-----HIKLVQVSTDEVYGSLGKTG  160 (346)
T ss_dssp             H-----TCCEEEECCCCC-----------CHHHHHHTHHHHHHHHHHHHS----T-----TSEEEEEEEGGGGCCCCSSC
T ss_pred             c-----CCCEEEECCcccchh--hhhhCHHHHHHHHHHHHHHHHHHHHhc----C-----CCEEEEeCchHHhCCCCcCC
Confidence            3     689999999976432  244667889999999999999887653    2     36899999964332211111


Q ss_pred             cccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHHHHHHHHhh---
Q 019722          188 RYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSKL---  264 (336)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~---  264 (336)
                      .     ..+.....+...|+.+|.+.+.+++.++.+.   +  ++++.++|+.+.++..... .....+........   
T Consensus       161 ~-----~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---g--~~~~ilRp~~v~G~~~~~~-~~~~~~~~~~~~~~~~~  229 (346)
T 4egb_A          161 R-----FTEETPLAPNSPYSSSKASADMIALAYYKTY---Q--LPVIVTRCSNNYGPYQYPE-KLIPLMVTNALEGKKLP  229 (346)
T ss_dssp             C-----BCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---C--CCEEEEEECEEESTTCCTT-SHHHHHHHHHHTTCCCE
T ss_pred             C-----cCCCCCCCCCChhHHHHHHHHHHHHHHHHHh---C--CCEEEEeecceeCcCCCcc-chHHHHHHHHHcCCCce
Confidence            1     1122223445679999999999999998875   4  9999999999998865432 22333333222211   


Q ss_pred             -c---------CChHHHHHHHHHHHhcCccccCCceeeccCcccccccCCCCHHHHHHHHHHHHHhhccCCC
Q 019722          265 -L---------KTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWTSKLGSNSNEASRLWAASELLVSRDPK  326 (336)
Q Consensus       265 -~---------~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~  326 (336)
                       .         ..++|+|.+++.++..+.    .|+.|+..+....+-        .++++.+.+.++...+
T Consensus       230 ~~~~~~~~~~~i~v~Dva~a~~~~~~~~~----~g~~~~i~~~~~~s~--------~e~~~~i~~~~g~~~~  289 (346)
T 4egb_A          230 LYGDGLNVRDWLHVTDHCSAIDVVLHKGR----VGEVYNIGGNNEKTN--------VEVVEQIITLLGKTKK  289 (346)
T ss_dssp             EETTSCCEECEEEHHHHHHHHHHHHHHCC----TTCEEEECCSCCEEH--------HHHHHHHHHHHTCCGG
T ss_pred             eeCCCCeEEeeEEHHHHHHHHHHHHhcCC----CCCEEEECCCCceeH--------HHHHHHHHHHhCCCcc
Confidence             1         126789999999987543    677777777665553        6777777777776543

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=99.87  E-value=2.9e-21  Score=177.90  Aligned_cols=235  Identities=15%  Similarity=0.120  Sum_probs=153.9

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCC-CCceEEEeccCCCHHHHHHHHHHHHhc
Q 019722           33 LSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCP-GSDIVVLPLDLSSLSSVRNFVSQFHSL  111 (336)
Q Consensus        33 l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~~  111 (336)
                      +++|++|||||+|+||++++++|+++|++|+++.|+.+...+.. .+..... ..++.++++|++|++++.++++     
T Consensus         3 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-----   76 (337)
T 2c29_D            3 SQSETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVK-HLLDLPKAETHLTLWKADLADEGSFDEAIK-----   76 (337)
T ss_dssp             ---CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHHH-HHHTSTTHHHHEEEEECCTTSTTTTHHHHT-----
T ss_pred             CCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHHH-HHHhcccCCCeEEEEEcCCCCHHHHHHHHc-----
Confidence            47899999999999999999999999999999999876433221 1111100 1368899999999998887764     


Q ss_pred             CCCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcc-ccc
Q 019722          112 NLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMI-RYL  190 (336)
Q Consensus       112 ~~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~-~~~  190 (336)
                        ++|+|||+|+....   ...+..++.+++|+.++..+++++.+..   .     .++||++||.++.++..... .++
T Consensus        77 --~~d~Vih~A~~~~~---~~~~~~~~~~~~nv~gt~~ll~a~~~~~---~-----~~riV~~SS~~~~~~~~~~~~~~~  143 (337)
T 2c29_D           77 --GCTGVFHVATPMDF---ESKDPENEVIKPTIEGMLGIMKSCAAAK---T-----VRRLVFTSSAGTVNIQEHQLPVYD  143 (337)
T ss_dssp             --TCSEEEECCCCCCS---SCSSHHHHTHHHHHHHHHHHHHHHHHHS---C-----CCEEEEECCGGGTSCSSSCCSEEC
T ss_pred             --CCCEEEEeccccCC---CCCChHHHHHHHHHHHHHHHHHHHHhCC---C-----ccEEEEeeeHhhcccCCCCCcccC
Confidence              58999999986521   1223345689999999999999987642   0     26999999987655422110 011


Q ss_pred             ccccCCC----CCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCcc-chhHHHHHH-------
Q 019722          191 GQISRNK----SHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRER-EGFITDLVF-------  258 (336)
Q Consensus       191 ~~~~~~~----~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~-~~~~~~~~~-------  258 (336)
                      +......    ...+....|+.||++.+.+++.++.+.   |  ++++.|+|+.+.++..... .........       
T Consensus       144 E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---g--i~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~  218 (337)
T 2c29_D          144 ESCWSDMEFCRAKKMTAWMYFVSKTLAEQAAWKYAKEN---N--IDFITIIPTLVVGPFIMSSMPPSLITALSPITGNEA  218 (337)
T ss_dssp             TTCCCCHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHHH---T--CCEEEEEECEEESCCSCSSCCHHHHHHTHHHHTCGG
T ss_pred             cccCCchhhhcccCCccchHHHHHHHHHHHHHHHHHHc---C--CcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCCc
Confidence            1000000    000123469999999999988877543   4  9999999999999975432 111111100       


Q ss_pred             ---HHHHhhcCChHHHHHHHHHHHhcCccccCCceeecc
Q 019722          259 ---FLTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFAD  294 (336)
Q Consensus       259 ---~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~  294 (336)
                         .........++|+|.++++++..+.   ..|.++..
T Consensus       219 ~~~~~~~~~~i~v~Dva~a~~~~~~~~~---~~~~~~~~  254 (337)
T 2c29_D          219 HYSIIRQGQFVHLDDLCNAHIYLFENPK---AEGRYICS  254 (337)
T ss_dssp             GHHHHTEEEEEEHHHHHHHHHHHHHCTT---CCEEEEEC
T ss_pred             cccccCCCCEEEHHHHHHHHHHHhcCcc---cCceEEEe
Confidence               0011125678999999999887432   35666543

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=99.87  E-value=4.8e-21  Score=178.79  Aligned_cols=262  Identities=11%  Similarity=0.029  Sum_probs=175.9

Q ss_pred             cccccCCCCCCCCCEEEEeCCCChHHHHHHHHHHHC-CCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCC-CHHH
Q 019722           23 AEQVTDGCPNLSSVTAIITGATSGIGAETARVLAKR-GARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLS-SLSS  100 (336)
Q Consensus        23 ~~~~~~~~~~l~gk~~lItGgs~gIG~aia~~L~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~-~~~~  100 (336)
                      -...+.|+.+|+++++|||||+|+||.+++++|+++ |++|++++|+.+.......       ..++.++.+|++ +.++
T Consensus        12 ~~~~~~~~~~m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~-------~~~v~~~~~Dl~~d~~~   84 (372)
T 3slg_A           12 LEAQTQGPGSMKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVK-------HERMHFFEGDITINKEW   84 (372)
T ss_dssp             -----------CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGG-------STTEEEEECCTTTCHHH
T ss_pred             hhhhhcCCcccCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhcc-------CCCeEEEeCccCCCHHH
Confidence            345566777889999999999999999999999999 9999999998765433211       358999999999 9999


Q ss_pred             HHHHHHHHHhcCCCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccc
Q 019722          101 VRNFVSQFHSLNLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHS  180 (336)
Q Consensus       101 v~~~~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~  180 (336)
                      +.++++       ++|+|||+|+.....  ...++.++.+++|+.++..+++++...          +.++|++||. +.
T Consensus        85 ~~~~~~-------~~d~Vih~A~~~~~~--~~~~~~~~~~~~nv~~~~~ll~a~~~~----------~~~~v~~SS~-~v  144 (372)
T 3slg_A           85 VEYHVK-------KCDVILPLVAIATPA--TYVKQPLRVFELDFEANLPIVRSAVKY----------GKHLVFPSTS-EV  144 (372)
T ss_dssp             HHHHHH-------HCSEEEECBCCCCHH--HHHHCHHHHHHHHTTTTHHHHHHHHHH----------TCEEEEECCG-GG
T ss_pred             HHHHhc-------cCCEEEEcCccccHH--HHhhCHHHHHHHHHHHHHHHHHHHHHh----------CCcEEEeCcH-HH
Confidence            988886       589999999975432  123456788999999999888887543          1599999995 44


Q ss_pred             cccCCcccccccccC--CCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCc-------cch
Q 019722          181 WFSGDMIRYLGQISR--NKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRE-------REG  251 (336)
Q Consensus       181 ~~~~~~~~~~~~~~~--~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~-------~~~  251 (336)
                      ++......+.+....  ......+...|+.+|.+.+.+++.++.+    +  ++++.++|+.+.++....       ...
T Consensus       145 yg~~~~~~~~e~~~~~~~~p~~~p~~~Y~~sK~~~E~~~~~~~~~----g--~~~~ilRp~~v~G~~~~~~~~~~~~~~~  218 (372)
T 3slg_A          145 YGMCADEQFDPDASALTYGPINKPRWIYACSKQLMDRVIWGYGME----G--LNFTLFRPFNWIGPGLDSIYTPKEGSSR  218 (372)
T ss_dssp             GBSCCCSSBCTTTCCEEECCTTCTTHHHHHHHHHHHHHHHHHHTT----T--CEEEEEEECSEECSSCCCTTCSBSCSCH
T ss_pred             hCCCCCCCCCccccccccCCCCCCCCcHHHHHHHHHHHHHHHHHC----C--CCEEEEccccccCCCcccccccccccch
Confidence            442221111111000  0000134558999999999999988765    4  999999999999886542       122


Q ss_pred             hHHHHHHHHHHh-------------hcCChHHHHHHHHHHHhcCccccCCceeeccCc-ccccccCCCCHHHHHHHHHHH
Q 019722          252 FITDLVFFLTSK-------------LLKTIPQGAATTCYVAIHPRLVNVSGKYFADCN-EAWTSKLGSNSNEASRLWAAS  317 (336)
Q Consensus       252 ~~~~~~~~~~~~-------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~-~~~~~~~~~~~~~~~~~w~~~  317 (336)
                      ....+.......             ....++|+|.+++.++..+. ....|+.|+..+ +...+-        .++++.+
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~-~~~~~~~~ni~~~~~~~s~--------~e~~~~i  289 (372)
T 3slg_A          219 VVTQFLGHIVRGENISLVDGGSQKRAFTYVDDGISALMKIIENSN-GVATGKIYNIGNPNNNFSV--------RELANKM  289 (372)
T ss_dssp             HHHHHHHHHHHTCCEEEGGGGCCEEECEEHHHHHHHHHHHHHCGG-GTTTTEEEEECCTTCEEEH--------HHHHHHH
T ss_pred             HHHHHHHHHHcCCCcEEeCCCceEEEEEEHHHHHHHHHHHHhccc-CcCCCceEEeCCCCCCccH--------HHHHHHH
Confidence            333333332221             11246889999999998553 224678887877 345553        6777777


Q ss_pred             HHhhccCCC
Q 019722          318 ELLVSRDPK  326 (336)
Q Consensus       318 ~~~~~~~~~  326 (336)
                      .+.++..+.
T Consensus       290 ~~~~g~~~~  298 (372)
T 3slg_A          290 LELAAEFPE  298 (372)
T ss_dssp             HHHHHHCTT
T ss_pred             HHHhCCCcc
Confidence            777776554

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=99.87  E-value=5.8e-21  Score=181.72  Aligned_cols=237  Identities=15%  Similarity=0.036  Sum_probs=159.0

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChH---HHHHHHHHHHhhCC-------CCceEEEeccCCCHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLK---AAEEAKARLASDCP-------GSDIVVLPLDLSSLS   99 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~---~~~~~~~~l~~~~~-------~~~~~~~~~Dl~~~~   99 (336)
                      +....++++|||||+|+||++++++|+++|++|++++|+..   ..+.+.+.+....+       ..++.++.+|+++++
T Consensus        64 ~~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~  143 (427)
T 4f6c_A           64 LSHRPLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMD  143 (427)
T ss_dssp             SCCCCCEEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---C
T ss_pred             CCCCCCCEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCcc
Confidence            44567889999999999999999999999999999999876   33444444332211       368999999999988


Q ss_pred             HHHHHHHHHHhcCCCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCcc
Q 019722          100 SVRNFVSQFHSLNLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIH  179 (336)
Q Consensus       100 ~v~~~~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~  179 (336)
                      ++.        .++++|+||||||...     ..+++++.+++|+.++..+++++.+    .      ..++|++||...
T Consensus       144 ~l~--------~~~~~d~Vih~A~~~~-----~~~~~~~~~~~Nv~g~~~l~~aa~~----~------~~~~v~~SS~~~  200 (427)
T 4f6c_A          144 DVV--------LPENMDTIIHAGARTD-----HFGDDDEFEKVNVQGTVDVIRLAQQ----H------HARLIYVSTISV  200 (427)
T ss_dssp             CCC--------CSSCCSEEEECCCCC------------CHHHHHHHHHHHHHHHHHH----T------TCEEEEEEEGGG
T ss_pred             cCC--------CcCCCCEEEECCcccC-----CCCCHHHHHHHHHHHHHHHHHHHHh----c------CCcEEEECchHh
Confidence            777        4568999999999764     2356788999999999999999877    1      369999999776


Q ss_pred             ccccCCcccccccccCCCC---CCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCcc------c
Q 019722          180 SWFSGDMIRYLGQISRNKS---HYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRER------E  250 (336)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~~---~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~------~  250 (336)
                        +........+....+..   .......|+.+|++.+.+++.++.    .|  ++++.|+||.|.++.....      .
T Consensus       201 --G~~~~~~~~~~~~~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~g--~~~~ivRpg~v~G~~~~~~~~~~~~~  272 (427)
T 4f6c_A          201 --GTYFDIDTEDVTFSEADVYKGQLLTSPYTRSKFYSELKVLEAVN----NG--LDGRIVRVGNLTSPYNGRWHMRNIKT  272 (427)
T ss_dssp             --GSEECSSCSCCEECTTCSCSSCCCCSHHHHHHHHHHHHHHHHHH----TT--CCEEEEEECCEESCSSSCCCCTTGGG
T ss_pred             --CCCccCCCCCccccccccccCCCCCCchHHHHHHHHHHHHHHHH----cC--CCEEEEeCCeeecCCCCCccccCcch
Confidence              21100000111111111   123566899999999999998753    35  9999999999998865542      1


Q ss_pred             hhHHHHHHHHHHhh------------cCChHHHHHHHHHHHhcCccccCCceeeccCcccccc
Q 019722          251 GFITDLVFFLTSKL------------LKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWTS  301 (336)
Q Consensus       251 ~~~~~~~~~~~~~~------------~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~~  301 (336)
                      ..+...........            ...++++|.++++++..+.    .|+.|..++....+
T Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~DvA~ai~~~~~~~~----~g~~~~l~~~~~~s  331 (427)
T 4f6c_A          273 NRFSMVMNDLLQLDCIGVSMAEMPVDFSFVDTTARQIVALAQVNT----PQIIYHVLSPNKMP  331 (427)
T ss_dssp             CHHHHHHHHHHHSSEEEHHHHTCEECCEEHHHHHHHHHHHTTSCC----CCSEEEESCSCCEE
T ss_pred             HHHHHHHHHHHhcCCCCCccccceEEEeeHHHHHHHHHHHHcCCC----CCCEEEecCCCCCc
Confidence            12333333322211            2345888999999987543    56677666654433

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=99.87  E-value=1.5e-20  Score=176.85  Aligned_cols=190  Identities=14%  Similarity=0.116  Sum_probs=136.7

Q ss_pred             CCEEEEeCCCChHHHHHHHHHH-HCCCEEEEeeCChHH---------HHHHHHHHHhhCC---CCc---eEEEeccCCCH
Q 019722           35 SVTAIITGATSGIGAETARVLA-KRGARLVLPARSLKA---------AEEAKARLASDCP---GSD---IVVLPLDLSSL   98 (336)
Q Consensus        35 gk~~lItGgs~gIG~aia~~L~-~~G~~V~~~~r~~~~---------~~~~~~~l~~~~~---~~~---~~~~~~Dl~~~   98 (336)
                      ++++|||||+|+||++++++|+ ++|++|++++|+...         .+.+.+.++....   ..+   +.++.+|++++
T Consensus         2 ~m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~   81 (397)
T 1gy8_A            2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE   81 (397)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCCH
Confidence            4589999999999999999999 999999999987543         2333222222211   124   89999999999


Q ss_pred             HHHHHHHHHHHhcCCCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCc
Q 019722           99 SSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSI  178 (336)
Q Consensus        99 ~~v~~~~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~  178 (336)
                      +++.+++++    ++++|+||||||.....  .+.+++++.+++|+.+++.+++++..    .+     .++||++||.+
T Consensus        82 ~~~~~~~~~----~~~~d~vih~A~~~~~~--~~~~~~~~~~~~Nv~g~~~ll~a~~~----~~-----~~~iv~~SS~~  146 (397)
T 1gy8_A           82 DFLNGVFTR----HGPIDAVVHMCAFLAVG--ESVRDPLKYYDNNVVGILRLLQAMLL----HK-----CDKIIFSSSAA  146 (397)
T ss_dssp             HHHHHHHHH----SCCCCEEEECCCCCCHH--HHHHCHHHHHHHHHHHHHHHHHHHHH----TT-----CCEEEEEEEGG
T ss_pred             HHHHHHHHh----cCCCCEEEECCCccCcC--cchhhHHHHHHHHhHHHHHHHHHHHH----hC-----CCEEEEECCHH
Confidence            998888764    45699999999975422  13456788999999999999998643    22     36999999954


Q ss_pred             cccccCCc--ccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCC
Q 019722          179 HSWFSGDM--IRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRL  245 (336)
Q Consensus       179 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~  245 (336)
                       .++....  ......+.++.....+...|+.+|++.+.+++.++.++   +  ++++.|+|+.+.++.
T Consensus       147 -v~g~~~~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~---g--i~~~ilRp~~v~G~~  209 (397)
T 1gy8_A          147 -IFGNPTMGSVSTNAEPIDINAKKSPESPYGESKLIAERMIRDCAEAY---G--IKGICLRYFNACGAH  209 (397)
T ss_dssp             -GTBSCCC-----CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHH---C--CEEEEEEECEEECCC
T ss_pred             -HhCCCCcccccccccCcCccCCCCCCCchHHHHHHHHHHHHHHHHHH---C--CcEEEEeccceeCCC
Confidence             3332210  00001111122223345689999999999999999886   4  999999999998775

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=99.87  E-value=5e-21  Score=176.34  Aligned_cols=234  Identities=17%  Similarity=0.115  Sum_probs=160.1

Q ss_pred             EEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCCCcc
Q 019722           37 TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLPLN  116 (336)
Q Consensus        37 ~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id  116 (336)
                      ++|||||+|+||++++++|+++|++|++++|+..+.++    +.    ..++.++.+|++|++++.++++       ++|
T Consensus        15 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----l~----~~~~~~~~~Dl~d~~~~~~~~~-------~~d   79 (342)
T 2x4g_A           15 KYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQR----LA----YLEPECRVAEMLDHAGLERALR-------GLD   79 (342)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGG----GG----GGCCEEEECCTTCHHHHHHHTT-------TCS
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhh----hc----cCCeEEEEecCCCHHHHHHHHc-------CCC
Confidence            79999999999999999999999999999998764332    11    2368899999999998887764       689


Q ss_pred             EEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcccccccccCC
Q 019722          117 LLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRN  196 (336)
Q Consensus       117 ~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~~~~~~  196 (336)
                      +|||+||...    ...+++++.+++|+.++..+++++.+.    +     .+++|++||..........    ..+ ++
T Consensus        80 ~vih~a~~~~----~~~~~~~~~~~~n~~~~~~l~~a~~~~----~-----~~~~v~~SS~~~~~~~~~~----~~~-~E  141 (342)
T 2x4g_A           80 GVIFSAGYYP----SRPRRWQEEVASALGQTNPFYAACLQA----R-----VPRILYVGSAYAMPRHPQG----LPG-HE  141 (342)
T ss_dssp             EEEEC----------------CHHHHHHHHHHHHHHHHHHH----T-----CSCEEEECCGGGSCCCTTS----SCB-CT
T ss_pred             EEEECCccCc----CCCCCHHHHHHHHHHHHHHHHHHHHHc----C-----CCeEEEECCHHhhCcCCCC----CCC-CC
Confidence            9999999653    234577889999999999999998874    1     3699999997654321110    011 11


Q ss_pred             CCCCCh----hhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCC-CccchhHHHHHHHHHHh--------
Q 019722          197 KSHYDA----TRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLT-REREGFITDLVFFLTSK--------  263 (336)
Q Consensus       197 ~~~~~~----~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~-~~~~~~~~~~~~~~~~~--------  263 (336)
                      .....+    ...|+.+|++.+.+++.++.   . |  ++++.|+||.+.++.. +..   .......+...        
T Consensus       142 ~~~~~p~~~~~~~Y~~sK~~~e~~~~~~~~---~-g--~~~~ilrp~~v~g~~~~~~~---~~~~~~~~~~~~~~~~~~~  212 (342)
T 2x4g_A          142 GLFYDSLPSGKSSYVLCKWALDEQAREQAR---N-G--LPVVIGIPGMVLGELDIGPT---TGRVITAIGNGEMTHYVAG  212 (342)
T ss_dssp             TCCCSSCCTTSCHHHHHHHHHHHHHHHHHH---T-T--CCEEEEEECEEECSCCSSCS---TTHHHHHHHTTCCCEEECC
T ss_pred             CCCCCccccccChHHHHHHHHHHHHHHHhh---c-C--CcEEEEeCCceECCCCcccc---HHHHHHHHHcCCCccccCC
Confidence            111222    56899999999999999886   2 5  9999999999999876 311   11122222111        


Q ss_pred             --hcCChHHHHHHHHHHHhcCccccCCceeeccCcccccccCCCCHHHHHHHHHHHHHhhccCC
Q 019722          264 --LLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWTSKLGSNSNEASRLWAASELLVSRDP  325 (336)
Q Consensus       264 --~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~  325 (336)
                        ....++|+|.++++++..+.    .|+.|+.++.. .+-        .++.+.+.+.++...
T Consensus       213 ~~~~i~v~Dva~~~~~~~~~~~----~g~~~~v~~~~-~s~--------~e~~~~i~~~~g~~~  263 (342)
T 2x4g_A          213 QRNVIDAAEAGRGLLMALERGR----IGERYLLTGHN-LEM--------ADLTRRIAELLGQPA  263 (342)
T ss_dssp             EEEEEEHHHHHHHHHHHHHHSC----TTCEEEECCEE-EEH--------HHHHHHHHHHHTCCC
T ss_pred             CcceeeHHHHHHHHHHHHhCCC----CCceEEEcCCc-ccH--------HHHHHHHHHHhCCCC
Confidence              13367899999999987543    27777777765 543        566666666666543

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=99.86  E-value=1.5e-20  Score=176.21  Aligned_cols=254  Identities=11%  Similarity=-0.003  Sum_probs=174.3

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHh
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHS  110 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  110 (336)
                      ++..++++|||||+|+||++++++|+++|++|++++|+.......      .  ..++.++.+|+++.+++.++++    
T Consensus        25 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~------~--~~~v~~~~~Dl~d~~~~~~~~~----   92 (379)
T 2c5a_A           25 WPSENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTE------D--MFCDEFHLVDLRVMENCLKVTE----   92 (379)
T ss_dssp             CTTSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCG------G--GTCSEEEECCTTSHHHHHHHHT----
T ss_pred             ccccCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhh------c--cCCceEEECCCCCHHHHHHHhC----
Confidence            344678999999999999999999999999999999986532210      0  2468899999999999888774    


Q ss_pred             cCCCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCc----
Q 019722          111 LNLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDM----  186 (336)
Q Consensus       111 ~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~----  186 (336)
                         ++|+|||+||..... ....+++++.+++|+.++..+++++...    +     .+++|++||.... +....    
T Consensus        93 ---~~d~Vih~A~~~~~~-~~~~~~~~~~~~~Nv~g~~~ll~a~~~~----~-----~~~~V~~SS~~v~-~~~~~~~~~  158 (379)
T 2c5a_A           93 ---GVDHVFNLAADMGGM-GFIQSNHSVIMYNNTMISFNMIEAARIN----G-----IKRFFYASSACIY-PEFKQLETT  158 (379)
T ss_dssp             ---TCSEEEECCCCCCCH-HHHTTCHHHHHHHHHHHHHHHHHHHHHT----T-----CSEEEEEEEGGGS-CGGGSSSSS
T ss_pred             ---CCCEEEECceecCcc-cccccCHHHHHHHHHHHHHHHHHHHHHc----C-----CCEEEEEeehhee-CCCCCCCcc
Confidence               689999999975321 1114567889999999999999988542    2     3699999996432 21100    


Q ss_pred             -ccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccc---hhHHHHHHHHHH
Q 019722          187 -IRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRERE---GFITDLVFFLTS  262 (336)
Q Consensus       187 -~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~---~~~~~~~~~~~~  262 (336)
                       ..+++...   ........|+.+|++.+.+++.++.+.   +  ++++.|+||.+.++......   .....+......
T Consensus       159 ~~~~~E~~~---~~~~~~~~Y~~sK~~~E~~~~~~~~~~---g--i~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~  230 (379)
T 2c5a_A          159 NVSLKESDA---WPAEPQDAFGLEKLATEELCKHYNKDF---G--IECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQT  230 (379)
T ss_dssp             SCEECGGGG---SSBCCSSHHHHHHHHHHHHHHHHHHHH---C--CEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHH
T ss_pred             CCCcCcccC---CCCCCCChhHHHHHHHHHHHHHHHHHH---C--CCEEEEEeCceeCcCCCcccccccHHHHHHHHHHh
Confidence             00111000   012345579999999999999998765   4  99999999999998654321   122223322211


Q ss_pred             h--------------hcCChHHHHHHHHHHHhcCccccCCceeeccCcccccccCCCCHHHHHHHHHHHHHhhccCCCCC
Q 019722          263 K--------------LLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWTSKLGSNSNEASRLWAASELLVSRDPKSV  328 (336)
Q Consensus       263 ~--------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~  328 (336)
                      .              ....++|+|.+++.++..+     .|..|+..+....+.        .++.+.+.+.++...+..
T Consensus       231 ~~~~~~~~g~g~~~~~~i~v~Dva~ai~~~l~~~-----~~~~~ni~~~~~~s~--------~e~~~~i~~~~g~~~~~~  297 (379)
T 2c5a_A          231 STDRFEMWGDGLQTRSFTFIDECVEGVLRLTKSD-----FREPVNIGSDEMVSM--------NEMAEMVLSFEEKKLPIH  297 (379)
T ss_dssp             CSSCEEEESCSCCEECCEEHHHHHHHHHHHHHSS-----CCSCEEECCCCCEEH--------HHHHHHHHHTTTCCCCEE
T ss_pred             CCCceEEeCCCCeeEEEEEHHHHHHHHHHHhhcc-----CCCeEEeCCCCccCH--------HHHHHHHHHHhCCCCcee
Confidence            1              1123789999999998744     344555565554443        677777888887765544


Q ss_pred             CCC
Q 019722          329 FDP  331 (336)
Q Consensus       329 ~~p  331 (336)
                      +.|
T Consensus       298 ~~p  300 (379)
T 2c5a_A          298 HIP  300 (379)
T ss_dssp             EEC
T ss_pred             eCC
Confidence            444

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=99.86  E-value=5.2e-21  Score=179.10  Aligned_cols=255  Identities=10%  Similarity=0.066  Sum_probs=173.7

Q ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCC-CEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHh
Q 019722           32 NLSSVTAIITGATSGIGAETARVLAKRG-ARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHS  110 (336)
Q Consensus        32 ~l~gk~~lItGgs~gIG~aia~~L~~~G-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  110 (336)
                      .++++++|||||+|+||++++++|+++| ++|++++|+.....+   .+.   ...++.++.+|+++++++.++++    
T Consensus        29 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~---~l~---~~~~v~~~~~Dl~d~~~l~~~~~----   98 (377)
T 2q1s_A           29 KLANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKI---NVP---DHPAVRFSETSITDDALLASLQD----   98 (377)
T ss_dssp             GGTTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGG---GSC---CCTTEEEECSCTTCHHHHHHCCS----
T ss_pred             HhCCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchh---hcc---CCCceEEEECCCCCHHHHHHHhh----
Confidence            3788999999999999999999999999 999999998653211   111   13578999999999988776554    


Q ss_pred             cCCCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccccc
Q 019722          111 LNLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYL  190 (336)
Q Consensus       111 ~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~  190 (336)
                         ++|+|||+||.....  .+.+++++.+++|+.++..+++++...   .+     .+++|++||... ++......++
T Consensus        99 ---~~d~Vih~A~~~~~~--~~~~~~~~~~~~nv~~~~~ll~a~~~~---~~-----~~~~V~~SS~~v-yg~~~~~~~~  164 (377)
T 2q1s_A           99 ---EYDYVFHLATYHGNQ--SSIHDPLADHENNTLTTLKLYERLKHF---KR-----LKKVVYSAAGCS-IAEKTFDDAK  164 (377)
T ss_dssp             ---CCSEEEECCCCSCHH--HHHHCHHHHHHHHTHHHHHHHHHHTTC---SS-----CCEEEEEEEC-------------
T ss_pred             ---CCCEEEECCCccCch--hhhhCHHHHHHHHHHHHHHHHHHHHHh---CC-----CCeEEEeCCHHH-cCCCCCCCcC
Confidence               799999999965321  234567889999999999999887431   01     369999999643 2211111111


Q ss_pred             ccccCCCC---CC-ChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCC---------Ccc---chhHH
Q 019722          191 GQISRNKS---HY-DATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLT---------RER---EGFIT  254 (336)
Q Consensus       191 ~~~~~~~~---~~-~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~---------~~~---~~~~~  254 (336)
                      .   .+..   +. .+...|+.+|++.+.+++.++.+.   +  ++++.|+||.+.++..         ...   .....
T Consensus       165 ~---~E~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---g--i~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~  236 (377)
T 2q1s_A          165 A---TEETDIVSLHNNDSPYSMSKIFGEFYSVYYHKQH---Q--LPTVRARFQNVYGPGEILGAGRWRGTPATVWRNVTP  236 (377)
T ss_dssp             -----CCCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHH---C--CCEEEEEECCEECTTCCTTCSSCCSSGGGTSCSHHH
T ss_pred             c---ccccccccccCCCCchHHHHHHHHHHHHHHHHHh---C--CCEEEEeeccEECCCCcccccccccCcccccccHHH
Confidence            0   0111   12 345679999999999999998775   4  9999999999999875         210   12233


Q ss_pred             HHHHHHHHhh-------------cCChHHHHHH-HHHHHhcCccccCCceeeccCcccccccCCCCHHHHHHHHHHHHHh
Q 019722          255 DLVFFLTSKL-------------LKTIPQGAAT-TCYVAIHPRLVNVSGKYFADCNEAWTSKLGSNSNEASRLWAASELL  320 (336)
Q Consensus       255 ~~~~~~~~~~-------------~~~~~~~a~~-~~~l~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~  320 (336)
                      .+........             ...++|+|.+ ++.++..+.    +| .|+..+....+-        .++.+.+.+.
T Consensus       237 ~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~a~i~~~~~~~~----~g-~~~i~~~~~~s~--------~e~~~~i~~~  303 (377)
T 2q1s_A          237 TFIYKALKGMPLPLENGGVATRDFIFVEDVANGLIACAADGTP----GG-VYNIASGKETSI--------ADLATKINEI  303 (377)
T ss_dssp             HHHHHHHTTCCCCCSGGGCCEECCEEHHHHHHHHHHHHHHCCT----TE-EEECCCCCCEEH--------HHHHHHHHHH
T ss_pred             HHHHHHHcCCCeEEeCCCCeEEeeEEHHHHHHHHHHHHHhcCC----CC-eEEecCCCceeH--------HHHHHHHHHH
Confidence            3333222111             1126888999 888887542    68 777776655553        7788888888


Q ss_pred             hccCCCCCCCC
Q 019722          321 VSRDPKSVFDP  331 (336)
Q Consensus       321 ~~~~~~~~~~p  331 (336)
                      ++......+.|
T Consensus       304 ~g~~~~~~~~p  314 (377)
T 2q1s_A          304 TGNNTELDRLP  314 (377)
T ss_dssp             HTCCSCCCCCC
T ss_pred             hCCCCCceeCC
Confidence            88776655555

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=99.86  E-value=7.9e-21  Score=174.86  Aligned_cols=244  Identities=15%  Similarity=0.093  Sum_probs=163.9

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      ...++++++|||||+|+||++++++|+++|++|++++|+.....+   .+..   -.++.++.+|+++++++.++++.  
T Consensus        16 ~~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---~l~~---~~~~~~~~~Dl~d~~~~~~~~~~--   87 (333)
T 2q1w_A           16 PRGSHMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRRE---HLKD---HPNLTFVEGSIADHALVNQLIGD--   87 (333)
T ss_dssp             -----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGG---GSCC---CTTEEEEECCTTCHHHHHHHHHH--
T ss_pred             eecCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchh---hHhh---cCCceEEEEeCCCHHHHHHHHhc--
Confidence            445788999999999999999999999999999999997542211   1110   14788999999999999988875  


Q ss_pred             hcCCCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccc---cCCc
Q 019722          110 SLNLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWF---SGDM  186 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~---~~~~  186 (336)
                         +++|+||||||.....   +.++++  +++|+.++..+++++.+.    +     .++||++||.+....   ....
T Consensus        88 ---~~~D~vih~A~~~~~~---~~~~~~--~~~N~~~~~~l~~a~~~~----~-----~~~iV~~SS~~~~g~~~~~~~~  150 (333)
T 2q1w_A           88 ---LQPDAVVHTAASYKDP---DDWYND--TLTNCVGGSNVVQAAKKN----N-----VGRFVYFQTALCYGVKPIQQPV  150 (333)
T ss_dssp             ---HCCSEEEECCCCCSCT---TCHHHH--HHHHTHHHHHHHHHHHHT----T-----CSEEEEEEEGGGGCSCCCSSSB
T ss_pred             ---cCCcEEEECceecCCC---ccCChH--HHHHHHHHHHHHHHHHHh----C-----CCEEEEECcHHHhCCCcccCCC
Confidence               2699999999976432   334444  999999999999998762    1     369999999654320   1110


Q ss_pred             ccccccccCCCCCCChhhHhHHHHHHHHHHHHH-HHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHHHHHHHH---
Q 019722          187 IRYLGQISRNKSHYDATRAYALSKLANVLHTKE-LAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTS---  262 (336)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~-la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~---  262 (336)
                       .+    .++.  .+....|+.+|++.+.+++. ++          ++..|.|+.+.++...  ......+......   
T Consensus       151 -~~----~E~~--~p~~~~Y~~sK~~~E~~~~~s~~----------~~~ilR~~~v~gp~~~--~~~~~~~~~~~~~~~~  211 (333)
T 2q1w_A          151 -RL----DHPR--NPANSSYAISKSANEDYLEYSGL----------DFVTFRLANVVGPRNV--SGPLPIFFQRLSEGKK  211 (333)
T ss_dssp             -CT----TSCC--CCTTCHHHHHHHHHHHHHHHHTC----------CEEEEEESEEESTTCC--SSHHHHHHHHHHTTCC
T ss_pred             -Cc----CCCC--CCCCCchHHHHHHHHHHHHhhhC----------CeEEEeeceEECcCCc--CcHHHHHHHHHHcCCe
Confidence             11    1111  22226799999999999887 54          3456778877776521  1222222222211   


Q ss_pred             -------hhcCChHHHHHHHHHHHhcCccccCCceeeccCcccccccCCCCHHHHHHHHHHHHHhhccCCCCCCCC
Q 019722          263 -------KLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWTSKLGSNSNEASRLWAASELLVSRDPKSVFDP  331 (336)
Q Consensus       263 -------~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~p  331 (336)
                             .....++|+|.++++++..+.     |+.|+.++....+-        .++++.+.+.++.. ...+.|
T Consensus       212 ~~~~~~~~~~i~v~Dva~ai~~~~~~~~-----g~~~~v~~~~~~s~--------~e~~~~i~~~~g~~-~~~~~~  273 (333)
T 2q1w_A          212 CFVTKARRDFVFVKDLARATVRAVDGVG-----HGAYHFSSGTDVAI--------KELYDAVVEAMALP-SYPEPE  273 (333)
T ss_dssp             CEEEECEECEEEHHHHHHHHHHHHTTCC-----CEEEECSCSCCEEH--------HHHHHHHHHHTTCS-SCCCCE
T ss_pred             eeCCCceEeeEEHHHHHHHHHHHHhcCC-----CCEEEeCCCCCccH--------HHHHHHHHHHhCCC-CceeCC
Confidence                   112457899999999987443     77777777655553        77788888888876 444444

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=99.86  E-value=9.1e-21  Score=174.80  Aligned_cols=235  Identities=14%  Similarity=0.056  Sum_probs=158.5

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCC-------CEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHH
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRG-------ARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRN  103 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G-------~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~  103 (336)
                      ..|+++++|||||+|+||.+++++|+++|       ++|++++|+......        ....++.++.+|+++++++.+
T Consensus        10 ~~~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~--------~~~~~~~~~~~Dl~d~~~~~~   81 (342)
T 2hrz_A           10 LYFQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPA--------GFSGAVDARAADLSAPGEAEK   81 (342)
T ss_dssp             SCCSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCT--------TCCSEEEEEECCTTSTTHHHH
T ss_pred             CCccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCcccc--------ccCCceeEEEcCCCCHHHHHH
Confidence            45789999999999999999999999999       899999998643211        014578999999999999888


Q ss_pred             HHHHHHhcCCCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCcccccc
Q 019722          104 FVSQFHSLNLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFS  183 (336)
Q Consensus       104 ~~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~  183 (336)
                      +++      +++|+||||||....   .+.+++++.+++|+.++..+++++.+...+.+    ..+++|++||.+.. +.
T Consensus        82 ~~~------~~~d~vih~A~~~~~---~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~----~~~~iv~~SS~~~~-~~  147 (342)
T 2hrz_A           82 LVE------ARPDVIFHLAAIVSG---EAELDFDKGYRINLDGTRYLFDAIRIANGKDG----YKPRVVFTSSIAVF-GA  147 (342)
T ss_dssp             HHH------TCCSEEEECCCCCHH---HHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHC----CCCEEEEEEEGGGC-CS
T ss_pred             HHh------cCCCEEEECCccCcc---cccccHHHHHHHHHHHHHHHHHHHHhcccccC----CCcEEEEeCchHhh-CC
Confidence            775      379999999997531   23467889999999999999999887543321    02699999998543 22


Q ss_pred             CCcccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEee--CCceeCCCCCccchhHHHHHHHHH
Q 019722          184 GDMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVH--PGIVRTRLTREREGFITDLVFFLT  261 (336)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~--PG~v~T~~~~~~~~~~~~~~~~~~  261 (336)
                      .....     .++.....+...|+.+|++.+.+++.++.+..-....+|++.|.  ||.+.++..    .+.........
T Consensus       148 ~~~~~-----~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~ir~~~v~g~pg~~~~~~~----~~~~~~~~~~~  218 (342)
T 2hrz_A          148 PLPYP-----IPDEFHTTPLTSYGTQKAICELLLSDYSRRGFFDGIGIRLPTICIRPGKPNAAAS----GFFSNILREPL  218 (342)
T ss_dssp             SCCSS-----BCTTCCCCCSSHHHHHHHHHHHHHHHHHHTTSCEEEEEEECEETTCCSSCCCSGG----GHHHHHHHHHH
T ss_pred             CCCCC-----cCCCCCCCCcchHHHHHHHHHHHHHHHHHhcCCCceeEEeeeEEecCCCCcchhH----HHHHHHHHHHh
Confidence            11111     11122233456899999999999999887642211236777776  776654431    12222222211


Q ss_pred             Hh-------------hcCChHHHHHHHHHHHhcCccccCCceeeccCc
Q 019722          262 SK-------------LLKTIPQGAATTCYVAIHPRLVNVSGKYFADCN  296 (336)
Q Consensus       262 ~~-------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~  296 (336)
                      ..             ....+++++.+++.++..+......|..|+..+
T Consensus       219 ~~~~~~~~~~~~~~~~~~~v~Dva~~~~~~~~~~~~~~~~~~~~ni~g  266 (342)
T 2hrz_A          219 VGQEAVLPVPESIRHWHASPRSAVGFLIHGAMIDVEKVGPRRNLSMPG  266 (342)
T ss_dssp             TTCCEEECSCTTCEEEEECHHHHHHHHHHHHHSCHHHHCSCCEEECCC
T ss_pred             cCCCeeccCCCccceeeEehHHHHHHHHHHHhccccccCCccEEEcCC
Confidence            11             123578889999998875432111345565554

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=99.86  E-value=3.8e-20  Score=170.95  Aligned_cols=249  Identities=12%  Similarity=0.074  Sum_probs=171.8

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHC--CCEEEEeeCChHHH-HHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcC
Q 019722           36 VTAIITGATSGIGAETARVLAKR--GARLVLPARSLKAA-EEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLN  112 (336)
Q Consensus        36 k~~lItGgs~gIG~aia~~L~~~--G~~V~~~~r~~~~~-~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  112 (336)
                      +++|||||+|+||++++++|+++  |++|++++|+.... .+...++    .+.++.++.+|+++++++.++++      
T Consensus         5 ~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~~~Dl~d~~~~~~~~~------   74 (348)
T 1oc2_A            5 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAI----LGDRVELVVGDIADAELVDKLAA------   74 (348)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGG----CSSSEEEEECCTTCHHHHHHHHT------
T ss_pred             cEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHHhhh----ccCCeEEEECCCCCHHHHHHHhh------
Confidence            68999999999999999999999  89999999864211 1111111    13578999999999998888775      


Q ss_pred             CCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCc------
Q 019722          113 LPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDM------  186 (336)
Q Consensus       113 ~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~------  186 (336)
                       .+|+||||||....  ..+.++++..+++|+.++..+++++.+.          ++++|++||..........      
T Consensus        75 -~~d~vih~A~~~~~--~~~~~~~~~~~~~Nv~g~~~l~~a~~~~----------~~~~v~~SS~~vyg~~~~~~~~~~~  141 (348)
T 1oc2_A           75 -KADAIVHYAAESHN--DNSLNDPSPFIHTNFIGTYTLLEAARKY----------DIRFHHVSTDEVYGDLPLREDLPGH  141 (348)
T ss_dssp             -TCSEEEECCSCCCH--HHHHHCCHHHHHHHTHHHHHHHHHHHHH----------TCEEEEEEEGGGGCCBCCGGGSTTT
T ss_pred             -cCCEEEECCcccCc--cchhhCHHHHHHHHHHHHHHHHHHHHHh----------CCeEEEecccceeCCCccccccccc
Confidence             46999999997532  1234567889999999999999999875          1499999996432111000      


Q ss_pred             ccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHHHHHHHHh---
Q 019722          187 IRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSK---  263 (336)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~---  263 (336)
                      ...+.....+..+..+...|+.+|++.+.+++.++.++   +  ++++.|+||.+.++..... .............   
T Consensus       142 ~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---g--i~~~ilrp~~v~G~~~~~~-~~~~~~~~~~~~~~~~  215 (348)
T 1oc2_A          142 GEGPGEKFTAETNYNPSSPYSSTKAASDLIVKAWVRSF---G--VKATISNCSNNYGPYQHIE-KFIPRQITNILAGIKP  215 (348)
T ss_dssp             TCSTTSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---C--CEEEEEEECCEESTTCCTT-SHHHHHHHHHHHTCCC
T ss_pred             ccccCCCcCCCCCCCCCCccHHHHHHHHHHHHHHHHHh---C--CCEEEEeeceeeCCCCCcc-chHHHHHHHHHcCCCc
Confidence            00000111222224455689999999999999999876   4  9999999999999876431 2222222222211   


Q ss_pred             ----------hcCChHHHHHHHHHHHhcCccccCCceeeccCcccccccCCCCHHHHHHHHHHHHHhhccCC
Q 019722          264 ----------LLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWTSKLGSNSNEASRLWAASELLVSRDP  325 (336)
Q Consensus       264 ----------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~  325 (336)
                                ....++|+|.++++++..+    .+|+.|+.+++...+.        .++.+.+.+.++...
T Consensus       216 ~~~~~~~~~~~~i~v~Dva~~~~~~~~~~----~~g~~~~i~~~~~~s~--------~e~~~~i~~~~g~~~  275 (348)
T 1oc2_A          216 KLYGEGKNVRDWIHTNDHSTGVWAILTKG----RMGETYLIGADGEKNN--------KEVLELILEKMGQPK  275 (348)
T ss_dssp             EEETTSCCEEECEEHHHHHHHHHHHHHHC----CTTCEEEECCSCEEEH--------HHHHHHHHHHTTCCT
T ss_pred             eEecCCCceEeeEEHHHHHHHHHHHhhCC----CCCCeEEeCCCCCCCH--------HHHHHHHHHHhCCCc
Confidence                      1234688999999988643    3687887777655553        666677777776653

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=99.85  E-value=3.7e-20  Score=168.67  Aligned_cols=242  Identities=16%  Similarity=0.147  Sum_probs=168.3

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCCCc
Q 019722           36 VTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLPL  115 (336)
Q Consensus        36 k~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i  115 (336)
                      |++|||||+|+||++++++|+++|..|++..|+....+.         ....+.++.+|+++ +++.++++       ++
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~~v~~~~~~~~~~~~---------~~~~~~~~~~Dl~~-~~~~~~~~-------~~   64 (313)
T 3ehe_A            2 SLIVVTGGAGFIGSHVVDKLSESNEIVVIDNLSSGNEEF---------VNEAARLVKADLAA-DDIKDYLK-------GA   64 (313)
T ss_dssp             -CEEEETTTSHHHHHHHHHHTTTSCEEEECCCSSCCGGG---------SCTTEEEECCCTTT-SCCHHHHT-------TC
T ss_pred             CEEEEECCCchHHHHHHHHHHhCCCEEEEEcCCCCChhh---------cCCCcEEEECcCCh-HHHHHHhc-------CC
Confidence            579999999999999999999999555555454332211         13578999999998 87777765       79


Q ss_pred             cEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcccccccccC
Q 019722          116 NLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISR  195 (336)
Q Consensus       116 d~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~~~~~  195 (336)
                      |++||+|+...  ...+.+++++.+++|+.++..+++++..    .+     .+++|++||.... +.....+     .+
T Consensus        65 d~vih~a~~~~--~~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~-----~~~iv~~SS~~vy-g~~~~~~-----~~  127 (313)
T 3ehe_A           65 EEVWHIAANPD--VRIGAENPDEIYRNNVLATYRLLEAMRK----AG-----VSRIVFTSTSTVY-GEAKVIP-----TP  127 (313)
T ss_dssp             SEEEECCCCCC--CC-CCCCHHHHHHHHHHHHHHHHHHHHH----HT-----CCEEEEECCGGGG-CSCSSSS-----BC
T ss_pred             CEEEECCCCCC--hhhhhhCHHHHHHHHHHHHHHHHHHHHH----cC-----CCeEEEeCchHHh-CcCCCCC-----CC
Confidence            99999999542  2345678899999999999999988543    22     3699999996533 2211111     11


Q ss_pred             CCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHHHHHHHHh------------
Q 019722          196 NKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSK------------  263 (336)
Q Consensus       196 ~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~------------  263 (336)
                      +..+..+...|+.+|++.+.+++.++.++   +  ++++.++|+.+.++....  .....+.......            
T Consensus       128 E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---g--~~~~ilRp~~v~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~g~~  200 (313)
T 3ehe_A          128 EDYPTHPISLYGASKLACEALIESYCHTF---D--MQAWIYRFANVIGRRSTH--GVIYDFIMKLKRNPEELEILGNGEQ  200 (313)
T ss_dssp             TTSCCCCCSHHHHHHHHHHHHHHHHHHHT---T--CEEEEEECSCEESTTCCC--SHHHHHHHHHHHCTTEEEESTTSCC
T ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHhc---C--CCEEEEeeccccCcCCCc--ChHHHHHHHHHcCCCceEEeCCCCe
Confidence            22224456689999999999999999875   4  999999999999886543  2222222222211            


Q ss_pred             --hcCChHHHHHHHHHHHhcCccccCCceeeccCcccccccCCCCHHHHHHHHHHHHHhhccCCCCCCC
Q 019722          264 --LLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWTSKLGSNSNEASRLWAASELLVSRDPKSVFD  330 (336)
Q Consensus       264 --~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~  330 (336)
                        ....++|+|.+++.++. +   ...|..|+..++...+-        .++.+.+.+.++..+...+.
T Consensus       201 ~~~~i~v~Dva~a~~~~~~-~---~~~~~~~ni~~~~~~s~--------~e~~~~i~~~~g~~~~~~~~  257 (313)
T 3ehe_A          201 NKSYIYISDCVDAMLFGLR-G---DERVNIFNIGSEDQIKV--------KRIAEIVCEELGLSPRFRFT  257 (313)
T ss_dssp             EECCEEHHHHHHHHHHHTT-C---CSSEEEEECCCSCCEEH--------HHHHHHHHHHTTCCCEEEEC
T ss_pred             EEeEEEHHHHHHHHHHHhc-c---CCCCceEEECCCCCeeH--------HHHHHHHHHHhCCCCceEEC
Confidence              11235788999998886 2   23577777777665553        67777777888776654443

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=99.85  E-value=2.1e-21  Score=168.08  Aligned_cols=199  Identities=16%  Similarity=0.193  Sum_probs=146.7

Q ss_pred             EEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCC-HHHHHHHHHHHHhcCCCc
Q 019722           37 TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSS-LSSVRNFVSQFHSLNLPL  115 (336)
Q Consensus        37 ~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~~~i  115 (336)
                      ++|||||+|+||++++++|+++|++|++++|+.++...          ..++.++++|++| ++++.++++       ++
T Consensus         2 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~----------~~~~~~~~~D~~d~~~~~~~~~~-------~~   64 (219)
T 3dqp_A            2 KIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQ----------YNNVKAVHFDVDWTPEEMAKQLH-------GM   64 (219)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCC----------CTTEEEEECCTTSCHHHHHTTTT-------TC
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhh----------cCCceEEEecccCCHHHHHHHHc-------CC
Confidence            58999999999999999999999999999999764332          1579999999999 888777664       69


Q ss_pred             cEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcccccccccC
Q 019722          116 NLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISR  195 (336)
Q Consensus       116 d~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~~~~~  195 (336)
                      |+||||||...          .+.+++|+.++..+++++.    +.+     .+++|++||..+....+    +.+    
T Consensus        65 d~vi~~ag~~~----------~~~~~~n~~~~~~l~~a~~----~~~-----~~~iv~~SS~~~~~~~~----~~e----  117 (219)
T 3dqp_A           65 DAIINVSGSGG----------KSLLKVDLYGAVKLMQAAE----KAE-----VKRFILLSTIFSLQPEK----WIG----  117 (219)
T ss_dssp             SEEEECCCCTT----------SSCCCCCCHHHHHHHHHHH----HTT-----CCEEEEECCTTTTCGGG----CCS----
T ss_pred             CEEEECCcCCC----------CCcEeEeHHHHHHHHHHHH----HhC-----CCEEEEECcccccCCCc----ccc----
Confidence            99999999754          2377889999998888773    222     36999999976543311    000    


Q ss_pred             CCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHHHHHHHHhhcCChHHHHHHH
Q 019722          196 NKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSKLLKTIPQGAATT  275 (336)
Q Consensus       196 ~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~  275 (336)
                        ........|+.+|++.+.+++      ...+  ++++.|+||++.++........-      -.......++|+|..+
T Consensus       118 --~~~~~~~~Y~~sK~~~e~~~~------~~~~--i~~~ilrp~~v~g~~~~~~~~~~------~~~~~~i~~~Dva~~i  181 (219)
T 3dqp_A          118 --AGFDALKDYYIAKHFADLYLT------KETN--LDYTIIQPGALTEEEATGLIDIN------DEVSASNTIGDVADTI  181 (219)
T ss_dssp             --HHHHHTHHHHHHHHHHHHHHH------HSCC--CEEEEEEECSEECSCCCSEEEES------SSCCCCEEHHHHHHHH
T ss_pred             --cccccccHHHHHHHHHHHHHH------hccC--CcEEEEeCceEecCCCCCccccC------CCcCCcccHHHHHHHH
Confidence              002236689999999998886      2345  99999999999988654422110      1112234679999999


Q ss_pred             HHHHhcCccccCCceeeccCccc
Q 019722          276 CYVAIHPRLVNVSGKYFADCNEA  298 (336)
Q Consensus       276 ~~l~~~~~~~~~~G~~~~~~~~~  298 (336)
                      ++++..+.   ..|+.|+.+++.
T Consensus       182 ~~~l~~~~---~~g~~~~i~~g~  201 (219)
T 3dqp_A          182 KELVMTDH---SIGKVISMHNGK  201 (219)
T ss_dssp             HHHHTCGG---GTTEEEEEEECS
T ss_pred             HHHHhCcc---ccCcEEEeCCCC
Confidence            99998654   357777775553

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=99.85  E-value=4.1e-20  Score=170.72  Aligned_cols=260  Identities=13%  Similarity=0.054  Sum_probs=172.1

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHH------HHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHH
Q 019722           35 SVTAIITGATSGIGAETARVLAKRGARLVLPARSLKA------AEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQF  108 (336)
Q Consensus        35 gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~------~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~  108 (336)
                      +|++|||||+|+||++++++|+++|++|++++|+...      ..+..+++.... +.++.++.+|+++++++.++++..
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~D~~~~~~~~~~~~~~   80 (348)
T 1ek6_A            2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELT-GRSVEFEEMDILDQGALQRLFKKY   80 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHH-TCCCEEEECCTTCHHHHHHHHHHC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhcc-CCceEEEECCCCCHHHHHHHHHhc
Confidence            5899999999999999999999999999999875432      112222332211 457899999999999998888752


Q ss_pred             HhcCCCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccc
Q 019722          109 HSLNLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIR  188 (336)
Q Consensus       109 ~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~  188 (336)
                           ++|+||||||.....  ...+++++.+++|+.++..+++++..    .+     .+++|++||... ++......
T Consensus        81 -----~~d~vih~A~~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~----~~-----~~~iv~~SS~~~-~g~~~~~~  143 (348)
T 1ek6_A           81 -----SFMAVIHFAGLKAVG--ESVQKPLDYYRVNLTGTIQLLEIMKA----HG-----VKNLVFSSSATV-YGNPQYLP  143 (348)
T ss_dssp             -----CEEEEEECCSCCCHH--HHHHCHHHHHHHHHHHHHHHHHHHHH----TT-----CCEEEEEEEGGG-GCSCSSSS
T ss_pred             -----CCCEEEECCCCcCcc--chhhchHHHHHHHHHHHHHHHHHHHH----hC-----CCEEEEECcHHH-hCCCCCCC
Confidence                 799999999975321  13456788999999999999886543    22     369999999654 32211111


Q ss_pred             ccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCC----Cc-----cchhHHHHHHH
Q 019722          189 YLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLT----RE-----REGFITDLVFF  259 (336)
Q Consensus       189 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~----~~-----~~~~~~~~~~~  259 (336)
                      ++    ++....+....|+.+|++.+.+++.++.+ . .+  +++..++|+.+.++..    ..     ...........
T Consensus       144 ~~----E~~~~~p~~~~Y~~sK~~~e~~~~~~~~~-~-~~--~~~~~lR~~~v~G~~~~g~~g~~~~~~~~~~~~~~~~~  215 (348)
T 1ek6_A          144 LD----EAHPTGGCTNPYGKSKFFIEEMIRDLCQA-D-KT--WNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQV  215 (348)
T ss_dssp             BC----TTSCCCCCSSHHHHHHHHHHHHHHHHHHH-C-TT--CEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHH
T ss_pred             cC----CCCCCCCCCCchHHHHHHHHHHHHHHHhc-C-CC--cceEEEeeccccCCCcccccCcCcccchhhHHHHHHHH
Confidence            11    11111222568999999999999999887 2 23  9999999999987632    10     01122222222


Q ss_pred             HH-Hh-------------------hcCChHHHHHHHHHHHhcCccccCCceeeccCcccccccCCCCHHHHHHHHHHHHH
Q 019722          260 LT-SK-------------------LLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWTSKLGSNSNEASRLWAASEL  319 (336)
Q Consensus       260 ~~-~~-------------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~  319 (336)
                      .. ..                   ....++|+|.+++.++..+.. ...++.|+..+....+-        .++.+.+.+
T Consensus       216 ~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~-~~g~~~~ni~~~~~~s~--------~e~~~~i~~  286 (348)
T 1ek6_A          216 AIGRREALNVFGNDYDTEDGTGVRDYIHVVDLAKGHIAALRKLKE-QCGCRIYNLGTGTGYSV--------LQMVQAMEK  286 (348)
T ss_dssp             HHTSSSCEEEECSCSSSSSSSCEECEEEHHHHHHHHHHHHHHHTT-TCCEEEEEECCSCCEEH--------HHHHHHHHH
T ss_pred             HHhcCCCeEEeCCcccCCCCceEEeeEEHHHHHHHHHHHHhcccc-cCCceEEEeCCCCCccH--------HHHHHHHHH
Confidence            21 00                   112358889999888864321 11236777766554543        667777777


Q ss_pred             hhccCCCCCC
Q 019722          320 LVSRDPKSVF  329 (336)
Q Consensus       320 ~~~~~~~~~~  329 (336)
                      .++...+..+
T Consensus       287 ~~g~~~~~~~  296 (348)
T 1ek6_A          287 ASGKKIPYKV  296 (348)
T ss_dssp             HHCSCCCEEE
T ss_pred             HhCCCCceee
Confidence            7776554433

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=99.85  E-value=4.2e-20  Score=170.56  Aligned_cols=256  Identities=9%  Similarity=0.004  Sum_probs=165.1

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      .+.++++++|||||+|+||++++++|+++|++|++++|+..........+   ....++.++.+|+.+..          
T Consensus        22 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~~~D~~~~~----------   88 (343)
T 2b69_A           22 HMEKDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHW---IGHENFELINHDVVEPL----------   88 (343)
T ss_dssp             -----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGG---TTCTTEEEEECCTTSCC----------
T ss_pred             ccccCCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCCccchhhhhhh---ccCCceEEEeCccCChh----------
Confidence            45678899999999999999999999999999999998743221111111   11357899999998752          


Q ss_pred             hcCCCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcccc
Q 019722          110 SLNLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRY  189 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~  189 (336)
                        +.++|+|||+||......  ..++++..+++|+.++..+++++...          +.++|++||... ++......+
T Consensus        89 --~~~~d~vih~A~~~~~~~--~~~~~~~~~~~n~~~~~~l~~a~~~~----------~~~~v~~SS~~v-~g~~~~~~~  153 (343)
T 2b69_A           89 --YIEVDQIYHLASPASPPN--YMYNPIKTLKTNTIGTLNMLGLAKRV----------GARLLLASTSEV-YGDPEVHPQ  153 (343)
T ss_dssp             --CCCCSEEEECCSCCSHHH--HTTCHHHHHHHHHHHHHHHHHHHHHH----------TCEEEEEEEGGG-GBSCSSSSB
T ss_pred             --hcCCCEEEECccccCchh--hhhCHHHHHHHHHHHHHHHHHHHHHh----------CCcEEEECcHHH-hCCCCCCCC
Confidence              457999999999754221  12456788999999999999987642          249999999643 332211111


Q ss_pred             cccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCcc-chhHHHHHHHHHHh-----
Q 019722          190 LGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRER-EGFITDLVFFLTSK-----  263 (336)
Q Consensus       190 ~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~-~~~~~~~~~~~~~~-----  263 (336)
                      ++..............|+.+|++.+.+++.++.+.   +  ++++.++||.+.++..... ......+.......     
T Consensus       154 ~E~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~--~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (343)
T 2b69_A          154 SEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQE---G--VEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTV  228 (343)
T ss_dssp             CTTCCCBCCSSSTTHHHHHHHHHHHHHHHHHHHHH---C--CCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEE
T ss_pred             cccccccCCCCCCCCchHHHHHHHHHHHHHHHHHh---C--CcEEEEEEcceeCcCCCCCcccHHHHHHHHHHcCCCceE
Confidence            11111111223456689999999999999988764   4  9999999999998865321 11222222222111     


Q ss_pred             --------hcCChHHHHHHHHHHHhcCccccCCceeeccCcccccccCCCCHHHHHHHHHHHHHhhccCCCCCCCC
Q 019722          264 --------LLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWTSKLGSNSNEASRLWAASELLVSRDPKSVFDP  331 (336)
Q Consensus       264 --------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~p  331 (336)
                              ....++|+|.+++.++..+.     |..|+..+....+-        .++.+.+.+.++......+.|
T Consensus       229 ~~~~~~~~~~v~v~Dva~a~~~~~~~~~-----~~~~~i~~~~~~s~--------~e~~~~i~~~~g~~~~~~~~p  291 (343)
T 2b69_A          229 YGSGSQTRAFQYVSDLVNGLVALMNSNV-----SSPVNLGNPEEHTI--------LEFAQLIKNLVGSGSEIQFLS  291 (343)
T ss_dssp             ESSSCCEEECEEHHHHHHHHHHHHTSSC-----CSCEEESCCCEEEH--------HHHHHHHHHHHTCCCCEEEEC
T ss_pred             cCCCCeEEeeEeHHHHHHHHHHHHhcCC-----CCeEEecCCCCCcH--------HHHHHHHHHHhCCCCCceeCC
Confidence                    11256888999988876431     34455555544442        667777777777765544444

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=99.85  E-value=7.3e-21  Score=173.80  Aligned_cols=230  Identities=14%  Similarity=0.105  Sum_probs=146.4

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeC-ChHHHHHHHHHHHhhC-CCCceEEEeccCCCHHHHHHHHHHHHhcC
Q 019722           35 SVTAIITGATSGIGAETARVLAKRGARLVLPAR-SLKAAEEAKARLASDC-PGSDIVVLPLDLSSLSSVRNFVSQFHSLN  112 (336)
Q Consensus        35 gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r-~~~~~~~~~~~l~~~~-~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  112 (336)
                      ||++|||||+|+||++++++|+++|++|+++.| +.+...+. ..+.... ...++.++++|++|++++.++++      
T Consensus         1 ~k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------   73 (322)
T 2p4h_X            1 KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDV-SFLTNLPGASEKLHFFNADLSNPDSFAAAIE------   73 (322)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC----CCC-HHHHTSTTHHHHEEECCCCTTCGGGGHHHHT------
T ss_pred             CCEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCccchhHH-HHHHhhhccCCceEEEecCCCCHHHHHHHHc------
Confidence            689999999999999999999999999999998 65321111 1111100 01368889999999999888775      


Q ss_pred             CCccEEEEcccCCCCCCCCCc-hhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCc-cccc
Q 019722          113 LPLNLLINNAGKFAHQHAISE-DGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDM-IRYL  190 (336)
Q Consensus       113 ~~id~lv~nAg~~~~~~~~~~-~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~-~~~~  190 (336)
                       .+|+|||||+...    ... +.+++.+++|+.+++.+++++.+..   +     .++||++||..+.++.+.. ..++
T Consensus        74 -~~d~vih~A~~~~----~~~~~~~~~~~~~nv~gt~~l~~aa~~~~---~-----~~~iV~~SS~~~~~~~~~~~~~~~  140 (322)
T 2p4h_X           74 -GCVGIFHTASPID----FAVSEPEEIVTKRTVDGALGILKACVNSK---T-----VKRFIYTSSGSAVSFNGKDKDVLD  140 (322)
T ss_dssp             -TCSEEEECCCCC------------CHHHHHHHHHHHHHHHHHTTCS---S-----CCEEEEEEEGGGTSCSSSCCSEEC
T ss_pred             -CCCEEEEcCCccc----CCCCChHHHHHHHHHHHHHHHHHHHHhcC---C-----ccEEEEeccHHHcccCCCCCeecC
Confidence             5799999997431    122 2245689999999999999887641   1     3699999998755432111 0111


Q ss_pred             ccccCCCC----CCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCcc-chhHHHHHHHHHH---
Q 019722          191 GQISRNKS----HYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRER-EGFITDLVFFLTS---  262 (336)
Q Consensus       191 ~~~~~~~~----~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~-~~~~~~~~~~~~~---  262 (336)
                      +....+..    ..+....|+.||++.+.+++.++.+   .|  ++++.|+||.+.+++.... .............   
T Consensus       141 e~~~~~~~~~~~~~p~~~~Y~~sK~~~e~~~~~~~~~---~g--i~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~g~~~  215 (322)
T 2p4h_X          141 ESDWSDVDLLRSVKPFGWNYAVSKTLAEKAVLEFGEQ---NG--IDVVTLILPFIVGRFVCPKLPDSIEKALVLVLGKKE  215 (322)
T ss_dssp             TTCCCCHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHH---TT--CCEEEEEECEEESCCCSSSCCHHHHHHTHHHHSCGG
T ss_pred             CccccchhhhcccCcccccHHHHHHHHHHHHHHHHHh---cC--CcEEEEcCCceECCCCCCCCCchHHHHHHHHhCCCc
Confidence            10000000    0011126999999888877766543   34  9999999999999976532 1111111111110   


Q ss_pred             ----h--hcCChHHHHHHHHHHHhcCccccCCceee
Q 019722          263 ----K--LLKTIPQGAATTCYVAIHPRLVNVSGKYF  292 (336)
Q Consensus       263 ----~--~~~~~~~~a~~~~~l~~~~~~~~~~G~~~  292 (336)
                          .  ....++|+|.++++++..+.   .+|+++
T Consensus       216 ~~~~~~~~~i~v~Dva~a~~~~~~~~~---~~g~~~  248 (322)
T 2p4h_X          216 QIGVTRFHMVHVDDVARAHIYLLENSV---PGGRYN  248 (322)
T ss_dssp             GCCEEEEEEEEHHHHHHHHHHHHHSCC---CCEEEE
T ss_pred             cCcCCCcCEEEHHHHHHHHHHHhhCcC---CCCCEE
Confidence                0  14578999999999986432   468755

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=99.85  E-value=6.7e-20  Score=168.61  Aligned_cols=243  Identities=16%  Similarity=0.067  Sum_probs=168.1

Q ss_pred             EEEEeCCCChHHHHHHHHHHHC---C---CEEEEeeCChHHH-HHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           37 TAIITGATSGIGAETARVLAKR---G---ARLVLPARSLKAA-EEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        37 ~~lItGgs~gIG~aia~~L~~~---G---~~V~~~~r~~~~~-~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      ++|||||+|+||++++++|+++   |   ++|++++|+.... .+..+.+.   .+.++.++.+|+++++++.+++    
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~----   74 (337)
T 1r6d_A            2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVD---ADPRLRFVHGDIRDAGLLAREL----   74 (337)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGT---TCTTEEEEECCTTCHHHHHHHT----
T ss_pred             eEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhhhhcc---cCCCeEEEEcCCCCHHHHHHHh----
Confidence            5999999999999999999997   8   9999999864210 01111111   1357899999999998887776    


Q ss_pred             hcCCCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcccc
Q 019722          110 SLNLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRY  189 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~  189 (336)
                         .++|+||||||....  ..+.+++++.+++|+.++..+++++.+..         .+++|++||.... +.....  
T Consensus        75 ---~~~d~Vih~A~~~~~--~~~~~~~~~~~~~Nv~~~~~l~~a~~~~~---------~~~~v~~SS~~vy-g~~~~~--  137 (337)
T 1r6d_A           75 ---RGVDAIVHFAAESHV--DRSIAGASVFTETNVQGTQTLLQCAVDAG---------VGRVVHVSTNQVY-GSIDSG--  137 (337)
T ss_dssp             ---TTCCEEEECCSCCCH--HHHHHCCHHHHHHHTHHHHHHHHHHHHTT---------CCEEEEEEEGGGG-CCCSSS--
T ss_pred             ---cCCCEEEECCCccCc--hhhhhCHHHHHHHHHHHHHHHHHHHHHcC---------CCEEEEecchHHh-CCCCCC--
Confidence               379999999996532  12345678899999999999999988752         3699999996432 211111  


Q ss_pred             cccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHHHHHHHHh------
Q 019722          190 LGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSK------  263 (336)
Q Consensus       190 ~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~------  263 (336)
                         ..++.....+...|+.+|++.+.+++.++.++   +  ++++.++||.+.++.... ......+.......      
T Consensus       138 ---~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---g--~~~~ilrp~~v~G~~~~~-~~~~~~~~~~~~~~~~~~~~  208 (337)
T 1r6d_A          138 ---SWTESSPLEPNSPYAASKAGSDLVARAYHRTY---G--LDVRITRCCNNYGPYQHP-EKLIPLFVTNLLDGGTLPLY  208 (337)
T ss_dssp             ---CBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---C--CCEEEEEECEEECTTCCT-TSHHHHHHHHHHTTCCEEEE
T ss_pred             ---CCCCCCCCCCCCchHHHHHHHHHHHHHHHHHH---C--CCEEEEEeeeeECCCCCC-CChHHHHHHHHhcCCCcEEe
Confidence               11112223445689999999999999998875   4  999999999999987543 12222222222111      


Q ss_pred             -------hcCChHHHHHHHHHHHhcCccccCCceeeccCcccccccCCCCHHHHHHHHHHHHHhhccC
Q 019722          264 -------LLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWTSKLGSNSNEASRLWAASELLVSRD  324 (336)
Q Consensus       264 -------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~  324 (336)
                             ....++|+|.+++.++..+    .+|+.|+.++....+-        .++.+.+.+.++..
T Consensus       209 ~~~~~~~~~i~v~Dva~a~~~~~~~~----~~g~~~~v~~~~~~s~--------~e~~~~i~~~~g~~  264 (337)
T 1r6d_A          209 GDGANVREWVHTDDHCRGIALVLAGG----RAGEIYHIGGGLELTN--------RELTGILLDSLGAD  264 (337)
T ss_dssp             TTSCCEEEEEEHHHHHHHHHHHHHHC----CTTCEEEECCCCEEEH--------HHHHHHHHHHHTCC
T ss_pred             CCCCeeEeeEeHHHHHHHHHHHHhCC----CCCCEEEeCCCCCccH--------HHHHHHHHHHhCCC
Confidence                   1124688999999988643    2677777777655543        56666666666654

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=99.85  E-value=1.8e-20  Score=174.02  Aligned_cols=250  Identities=11%  Similarity=0.017  Sum_probs=165.2

Q ss_pred             ccCCCCCCCCCEEEEeCCCChHHHHHHHHHHHCC-CEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHH
Q 019722           26 VTDGCPNLSSVTAIITGATSGIGAETARVLAKRG-ARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNF  104 (336)
Q Consensus        26 ~~~~~~~l~gk~~lItGgs~gIG~aia~~L~~~G-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~  104 (336)
                      .+..+.+++++++|||||+|+||++++++|+++| ++|++++|+.....  ...+      .++. +.+|+++.+.+..+
T Consensus        37 ~~~~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~--~~~~------~~~~-~~~d~~~~~~~~~~  107 (357)
T 2x6t_A           37 GTGGGSGIEGRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK--FVNL------VDLN-IADYMDKEDFLIQI  107 (357)
T ss_dssp             -----------CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGG--GGGT------TTSC-CSEEEEHHHHHHHH
T ss_pred             cccccccCCCCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcch--hhcc------cCce-EeeecCcHHHHHHH
Confidence            3333556788999999999999999999999999 89999999765321  1111      1222 67899998888877


Q ss_pred             HHHHHhcCCCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccC
Q 019722          105 VSQFHSLNLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSG  184 (336)
Q Consensus       105 ~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~  184 (336)
                      ++.  ..++++|+|||+||....    +.+++++.+++|+.++..+++++.+.    +     . ++|++||.... +..
T Consensus       108 ~~~--~~~~~~d~Vih~A~~~~~----~~~~~~~~~~~n~~~~~~ll~a~~~~----~-----~-r~V~~SS~~v~-g~~  170 (357)
T 2x6t_A          108 MAG--EEFGDVEAIFHEGACSST----TEWDGKYMMDNNYQYSKELLHYCLER----E-----I-PFLYASSAATY-GGR  170 (357)
T ss_dssp             HTT--CCCSSCCEEEECCSCCCT----TCCCHHHHHHHTHHHHHHHHHHHHHH----T-----C-CEEEEEEGGGG-CSC
T ss_pred             Hhh--cccCCCCEEEECCcccCC----ccCCHHHHHHHHHHHHHHHHHHHHHc----C-----C-eEEEEcchHHh-CCC
Confidence            653  235689999999997543    34567889999999999999998762    1     3 89999997543 221


Q ss_pred             CcccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCcc---chhHHHHHHHHH
Q 019722          185 DMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRER---EGFITDLVFFLT  261 (336)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~---~~~~~~~~~~~~  261 (336)
                      ....+++     .....+...|+.+|++.+.+++.++.+.   +  ++++.|+||.+.++.....   ......+.....
T Consensus       171 ~~~~~~E-----~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---g--~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~  240 (357)
T 2x6t_A          171 TSDFIES-----REYEKPLNVFGYSKFLFDEYVRQILPEA---N--SQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLN  240 (357)
T ss_dssp             SSCCCSS-----GGGCCCSSHHHHHHHHHHHHHHHHGGGC---S--SCEEEEEECEEESSSCTTCGGGSCHHHHHHHHHH
T ss_pred             CCCCcCC-----cCCCCCCChhHHHHHHHHHHHHHHHHHc---C--CCEEEEecCeEECCCCCCCcccchHHHHHHHHHH
Confidence            1111111     1112235579999999999999987653   4  9999999999998864421   122222222221


Q ss_pred             Hh--------------hcCChHHHHHHHHHHHhcCccccCCceeeccCcccccccCCCCHHHHHHHHHHHHHhhccC
Q 019722          262 SK--------------LLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWTSKLGSNSNEASRLWAASELLVSRD  324 (336)
Q Consensus       262 ~~--------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~  324 (336)
                      ..              ....++|+|.++++++..+.     |..|+.+++...+-        .++.+.+.+.++..
T Consensus       241 ~~~~~~~~~~~~~~~~~~i~v~Dva~ai~~~~~~~~-----~~~~~i~~~~~~s~--------~e~~~~i~~~~g~~  304 (357)
T 2x6t_A          241 NGESPKLFEGSENFKRDFVYVGDVADVNLWFLENGV-----SGIFNLGTGRAESF--------QAVADATLAYHKKG  304 (357)
T ss_dssp             TTCCCEEETTGGGCEECEEEHHHHHHHHHHHHHHCC-----CEEEEESCSCCEEH--------HHHHHHHHHHHTCC
T ss_pred             cCCCcEEeCCCCcceEccEEHHHHHHHHHHHHhcCC-----CCeEEecCCCcccH--------HHHHHHHHHHcCCC
Confidence            11              12356889999999987543     66676666554443        66777777777765

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=99.84  E-value=1.7e-19  Score=164.21  Aligned_cols=240  Identities=13%  Similarity=0.078  Sum_probs=171.5

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCCC
Q 019722           35 SVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLP  114 (336)
Q Consensus        35 gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  114 (336)
                      ++++|||||+|+||++++++|+++|++|++++|++....  .         .++.++.+|++ .+++.++++       +
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~--~---------~~~~~~~~Dl~-~~~~~~~~~-------~   62 (311)
T 3m2p_A            2 SLKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKA--I---------NDYEYRVSDYT-LEDLINQLN-------D   62 (311)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC----------------CCEEEECCCC-HHHHHHHTT-------T
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCccc--C---------CceEEEEcccc-HHHHHHhhc-------C
Confidence            378999999999999999999999999999999943322  1         16889999999 888877765       7


Q ss_pred             ccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccccccccc
Q 019722          115 LNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQIS  194 (336)
Q Consensus       115 id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~~~~  194 (336)
                      +|+|||+|+.....      +.++.+++|+.++..+++++...    +     .+++|++||.. .++.....++     
T Consensus        63 ~d~Vih~a~~~~~~------~~~~~~~~n~~~~~~ll~a~~~~----~-----~~r~v~~SS~~-vyg~~~~~~~-----  121 (311)
T 3m2p_A           63 VDAVVHLAATRGSQ------GKISEFHDNEILTQNLYDACYEN----N-----ISNIVYASTIS-AYSDETSLPW-----  121 (311)
T ss_dssp             CSEEEECCCCCCSS------SCGGGTHHHHHHHHHHHHHHHHT----T-----CCEEEEEEEGG-GCCCGGGCSB-----
T ss_pred             CCEEEEccccCCCC------ChHHHHHHHHHHHHHHHHHHHHc----C-----CCEEEEEccHH-HhCCCCCCCC-----
Confidence            99999999976433      56678899999999988887542    2     35899999953 3332211111     


Q ss_pred             CCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHHHHHHHHh-----------
Q 019722          195 RNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSK-----------  263 (336)
Q Consensus       195 ~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~-----------  263 (336)
                      ++.....+...|+.+|.+.+.+++.++.+.   +  ++++.+.|+.+.++..... .....+.......           
T Consensus       122 ~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---g--~~~~ilRp~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~  195 (311)
T 3m2p_A          122 NEKELPLPDLMYGVSKLACEHIGNIYSRKK---G--LCIKNLRFAHLYGFNEKNN-YMINRFFRQAFHGEQLTLHANSVA  195 (311)
T ss_dssp             CTTSCCCCSSHHHHHHHHHHHHHHHHHHHS---C--CEEEEEEECEEECSCC--C-CHHHHHHHHHHTCCCEEESSBCCC
T ss_pred             CCCCCCCCCchhHHHHHHHHHHHHHHHHHc---C--CCEEEEeeCceeCcCCCCC-CHHHHHHHHHHcCCCeEEecCCCe
Confidence            122223445689999999999999988753   4  9999999999998876532 2233333332211           


Q ss_pred             --hcCChHHHHHHHHHHHhcCccccCCceeeccCcccccccCCCCHHHHHHHHHHHHHhhccCCCCCCCCC
Q 019722          264 --LLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWTSKLGSNSNEASRLWAASELLVSRDPKSVFDPL  332 (336)
Q Consensus       264 --~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~p~  332 (336)
                        ....++|+|.+++.++..+.    .|+.|+..+....+.        .++++.+.+.++..++..+.|.
T Consensus       196 ~~~~v~v~Dva~a~~~~~~~~~----~~~~~~i~~~~~~s~--------~e~~~~i~~~~g~~~~~~~~~~  254 (311)
T 3m2p_A          196 KREFLYAKDAAKSVIYALKQEK----VSGTFNIGSGDALTN--------YEVANTINNAFGNKDNLLVKNP  254 (311)
T ss_dssp             CEEEEEHHHHHHHHHHHTTCTT----CCEEEEECCSCEECH--------HHHHHHHHHHTTCTTCEEECSS
T ss_pred             EEceEEHHHHHHHHHHHHhcCC----CCCeEEeCCCCcccH--------HHHHHHHHHHhCCCCcceecCC
Confidence              11234688999999887543    577777776665664        7888888889988776665554

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=99.84  E-value=2.2e-19  Score=168.15  Aligned_cols=250  Identities=14%  Similarity=0.008  Sum_probs=163.2

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHH-----HHHHHHHHHhhCCCC-ceEEEeccCCCHHHHHHHHHHHH
Q 019722           36 VTAIITGATSGIGAETARVLAKRGARLVLPARSLKA-----AEEAKARLASDCPGS-DIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        36 k~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~-----~~~~~~~l~~~~~~~-~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      |++|||||+|+||.+++++|+++|++|++++|+...     ++.....+...  +. ++.++.+|+++.+++.++++.+ 
T Consensus        29 k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~~~-  105 (381)
T 1n7h_A           29 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNV--NKALMKLHYADLTDASSLRRWIDVI-  105 (381)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC----------CCEEEEECCTTCHHHHHHHHHHH-
T ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCccccchhhhhhhhccccc--cccceEEEECCCCCHHHHHHHHHhc-
Confidence            789999999999999999999999999999998653     22111111111  22 7889999999999999988765 


Q ss_pred             hcCCCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcccc
Q 019722          110 SLNLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRY  189 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~  189 (336)
                          ++|+||||||.....  .+.++++..+++|+.++..+++++.+...+++.    .+++|++||.... +.... .+
T Consensus       106 ----~~d~Vih~A~~~~~~--~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~~----~~~~v~~SS~~vy-g~~~~-~~  173 (381)
T 1n7h_A          106 ----KPDEVYNLAAQSHVA--VSFEIPDYTADVVATGALRLLEAVRSHTIDSGR----TVKYYQAGSSEMF-GSTPP-PQ  173 (381)
T ss_dssp             ----CCSEEEECCSCCCHH--HHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCC----CCEEEEEEEGGGG-TTSCS-SB
T ss_pred             ----CCCEEEECCcccCcc--ccccCHHHHHHHHHHHHHHHHHHHHHhCCccCC----ccEEEEeCcHHHh-CCCCC-CC
Confidence                689999999975321  234678889999999999999999998765321    3699999996543 21111 11


Q ss_pred             cccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCcc--chhHHHHHHHHHHh----
Q 019722          190 LGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRER--EGFITDLVFFLTSK----  263 (336)
Q Consensus       190 ~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~--~~~~~~~~~~~~~~----  263 (336)
                           ++.....+...|+.+|++.+.+++.++.+++     +.+..+.|..+..+.....  ..............    
T Consensus       174 -----~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~-----~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~  243 (381)
T 1n7h_A          174 -----SETTPFHPRSPYAASKCAAHWYTVNYREAYG-----LFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTK  243 (381)
T ss_dssp             -----CTTSCCCCCSHHHHHHHHHHHHHHHHHHHHC-----CEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCC
T ss_pred             -----CCCCCCCCCCchHHHHHHHHHHHHHHHHHhC-----CcEEEEEeCceeCCCCCCcchhHHHHHHHHHHHcCCCCe
Confidence                 1122234456899999999999999998764     4444455544444332211  01111122111111    


Q ss_pred             ----------hcCChHHHHHHHHHHHhcCccccCCceeeccCcccccccCCCCHHHHHHHHHHHHHhhcc
Q 019722          264 ----------LLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWTSKLGSNSNEASRLWAASELLVSR  323 (336)
Q Consensus       264 ----------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~  323 (336)
                                ....++|+|.++++++..+.     +..|+.++....+-        .++.+.+.+.++.
T Consensus       244 ~~~g~~~~~~~~v~v~Dva~a~~~~~~~~~-----~~~~~i~~~~~~s~--------~e~~~~i~~~~g~  300 (381)
T 1n7h_A          244 LFLGNLQASRDWGFAGDYVEAMWLMLQQEK-----PDDYVVATEEGHTV--------EEFLDVSFGYLGL  300 (381)
T ss_dssp             EEESCTTCEEECEEHHHHHHHHHHHHTSSS-----CCEEEECCSCEEEH--------HHHHHHHHHHTTC
T ss_pred             EEeCCCCceeeeEEHHHHHHHHHHHHhCCC-----CCeEEeeCCCCCcH--------HHHHHHHHHHcCC
Confidence                      12346889999999987543     23444555444442        5566666666665

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=99.84  E-value=1.4e-20  Score=160.56  Aligned_cols=202  Identities=12%  Similarity=0.016  Sum_probs=142.9

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCC
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNL  113 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  113 (336)
                      ++++++||||+|+||++++++|+++|++|++++|++++....        ...++.++.+|+++++++.++++       
T Consensus         2 ~~~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~--------~~~~~~~~~~D~~~~~~~~~~~~-------   66 (206)
T 1hdo_A            2 AVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSE--------GPRPAHVVVGDVLQAADVDKTVA-------   66 (206)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSS--------SCCCSEEEESCTTSHHHHHHHHT-------
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhcccc--------cCCceEEEEecCCCHHHHHHHHc-------
Confidence            458999999999999999999999999999999997653211        13578999999999998888775       


Q ss_pred             CccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcccccccc
Q 019722          114 PLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQI  193 (336)
Q Consensus       114 ~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~~~  193 (336)
                      .+|++|||||.....      ++   .++|+.+...+++++..    .+     .+++|++||.........        
T Consensus        67 ~~d~vi~~a~~~~~~------~~---~~~n~~~~~~~~~~~~~----~~-----~~~~v~~Ss~~~~~~~~~--------  120 (206)
T 1hdo_A           67 GQDAVIVLLGTRNDL------SP---TTVMSEGARNIVAAMKA----HG-----VDKVVACTSAFLLWDPTK--------  120 (206)
T ss_dssp             TCSEEEECCCCTTCC------SC---CCHHHHHHHHHHHHHHH----HT-----CCEEEEECCGGGTSCTTC--------
T ss_pred             CCCEEEECccCCCCC------Cc---cchHHHHHHHHHHHHHH----hC-----CCeEEEEeeeeeccCccc--------
Confidence            589999999975431      11   13788887777776654    22     369999999754321100        


Q ss_pred             cCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCce-eCCCCCccchhHHHHHHHHHHhhcCChHHHH
Q 019722          194 SRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIV-RTRLTREREGFITDLVFFLTSKLLKTIPQGA  272 (336)
Q Consensus       194 ~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v-~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~a  272 (336)
                           .......|+.+|++++.+++.       .+  ++++.|+||.+ .++..........    ..+......++|+|
T Consensus       121 -----~~~~~~~y~~~K~~~e~~~~~-------~~--i~~~~lrp~~~~~~~~~~~~~~~~~----~~~~~~~i~~~Dva  182 (206)
T 1hdo_A          121 -----VPPRLQAVTDDHIRMHKVLRE-------SG--LKYVAVMPPHIGDQPLTGAYTVTLD----GRGPSRVISKHDLG  182 (206)
T ss_dssp             -----SCGGGHHHHHHHHHHHHHHHH-------TC--SEEEEECCSEEECCCCCSCCEEESS----SCSSCSEEEHHHHH
T ss_pred             -----ccccchhHHHHHHHHHHHHHh-------CC--CCEEEEeCCcccCCCCCcceEeccc----CCCCCCccCHHHHH
Confidence                 011567899999999988742       34  99999999999 4443322211110    00002455789999


Q ss_pred             HHHHHHHhcCccccCCceeeccCcc
Q 019722          273 ATTCYVAIHPRLVNVSGKYFADCNE  297 (336)
Q Consensus       273 ~~~~~l~~~~~~~~~~G~~~~~~~~  297 (336)
                      ..+++++..+.   .+|+.+..+++
T Consensus       183 ~~~~~~~~~~~---~~g~~~~i~~g  204 (206)
T 1hdo_A          183 HFMLRCLTTDE---YDGHSTYPSHQ  204 (206)
T ss_dssp             HHHHHTTSCST---TTTCEEEEECC
T ss_pred             HHHHHHhcCcc---ccccceeeecc
Confidence            99999997543   57888877664

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=99.84  E-value=2.5e-19  Score=166.96  Aligned_cols=252  Identities=15%  Similarity=0.040  Sum_probs=160.6

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHH-HHHHHHHhhC--CCCceEEEeccCCCHHHHHHHHHHHHhc
Q 019722           35 SVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAE-EAKARLASDC--PGSDIVVLPLDLSSLSSVRNFVSQFHSL  111 (336)
Q Consensus        35 gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~-~~~~~l~~~~--~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  111 (336)
                      +|++|||||+|+||++++++|+++|++|++++|+..... +..+.+....  .+.++.++.+|+++++++.++++.+   
T Consensus         1 m~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---   77 (372)
T 1db3_A            1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREV---   77 (372)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHH---
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccchHHHHHHhhccccCCCceEEEECCCCCHHHHHHHHHhc---
Confidence            478999999999999999999999999999999865421 1122221110  1357899999999999999988865   


Q ss_pred             CCCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcccccc
Q 019722          112 NLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLG  191 (336)
Q Consensus       112 ~~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~  191 (336)
                        ++|+||||||.....  .+.++++..+++|+.++..+++++.+...+.      .+++|++||.+.. +......   
T Consensus        78 --~~d~vih~A~~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~------~~~iv~~SS~~v~-g~~~~~~---  143 (372)
T 1db3_A           78 --QPDEVYNLGAMSHVA--VSFESPEYTADVDAMGTLRLLEAIRFLGLEK------KTRFYQASTSELY-GLVQEIP---  143 (372)
T ss_dssp             --CCSEEEECCCCCTTT--TTTSCHHHHHHHHTHHHHHHHHHHHHTTCTT------TCEEEEEEEGGGG-TTCCSSS---
T ss_pred             --CCCEEEECCcccCcc--ccccCHHHHHHHHHHHHHHHHHHHHHhCCCC------CcEEEEeCChhhh-CCCCCCC---
Confidence              689999999975432  3456778899999999999999997754321      2699999996443 2111111   


Q ss_pred             cccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccc--hhHHHHHHHHHHh------
Q 019722          192 QISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRERE--GFITDLVFFLTSK------  263 (336)
Q Consensus       192 ~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~--~~~~~~~~~~~~~------  263 (336)
                        .++.....+...|+.+|++.+.+++.++.++.     +.+..+.|..+..+......  .............      
T Consensus       144 --~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~-----~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~  216 (372)
T 1db3_A          144 --QKETTPFYPRSPYAVAKLYAYWITVNYRESYG-----MYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLY  216 (372)
T ss_dssp             --BCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHC-----CCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEE
T ss_pred             --CCccCCCCCCChHHHHHHHHHHHHHHHHHHhC-----CCeEEEEECCccCCCCCCcchhhHHHHHHHHHHcCCCCcee
Confidence              11122233456899999999999999998764     55666777666655432211  1112222221111      


Q ss_pred             --------hcCChHHHHHHHHHHHhcCccccCCceeeccCcccccccCCCCHHHHHHHHHHHHHhhcc
Q 019722          264 --------LLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWTSKLGSNSNEASRLWAASELLVSR  323 (336)
Q Consensus       264 --------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~  323 (336)
                              ....++|+|.+++.++..+.     +..|+..+....+-        .++.+.+.+.++.
T Consensus       217 ~g~~~~~~~~i~v~Dva~a~~~~~~~~~-----~~~~ni~~~~~~s~--------~e~~~~i~~~~g~  271 (372)
T 1db3_A          217 LGNMDSLRDWGHAKDYVKMQWMMLQQEQ-----PEDFVIATGVQYSV--------RQFVEMAAAQLGI  271 (372)
T ss_dssp             ESCTTCEECCEEHHHHHHHHHHTTSSSS-----CCCEEECCCCCEEH--------HHHHHHHHHTTTE
T ss_pred             ecCCCceeeeeEHHHHHHHHHHHHhcCC-----CceEEEcCCCceeH--------HHHHHHHHHHhCC
Confidence                    01235788888888876432     23444444433332        5666666666665

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=99.84  E-value=4e-19  Score=163.70  Aligned_cols=250  Identities=12%  Similarity=0.023  Sum_probs=168.1

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHC-CCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCH-HHHHHHHHHHHhcCC
Q 019722           36 VTAIITGATSGIGAETARVLAKR-GARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSL-SSVRNFVSQFHSLNL  113 (336)
Q Consensus        36 k~~lItGgs~gIG~aia~~L~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~-~~v~~~~~~~~~~~~  113 (336)
                      +++|||||+|+||++++++|+++ |++|++++|+..+.....       ...++.++++|+++. +.+.++++       
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~-------~~~~~~~~~~D~~~~~~~~~~~~~-------   66 (345)
T 2bll_A            1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL-------NHPHFHFVEGDISIHSEWIEYHVK-------   66 (345)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGT-------TCTTEEEEECCTTTCSHHHHHHHH-------
T ss_pred             CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHhh-------cCCCeEEEeccccCcHHHHHhhcc-------
Confidence            47999999999999999999998 899999999876543211       135789999999984 55666665       


Q ss_pred             CccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcccccccc
Q 019722          114 PLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQI  193 (336)
Q Consensus       114 ~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~~~  193 (336)
                      ++|+|||+||.....  ...+++++.+++|+.++..+++++...          ++++|++||... ++......+++..
T Consensus        67 ~~d~vih~A~~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~----------~~~~v~~SS~~v-~g~~~~~~~~e~~  133 (345)
T 2bll_A           67 KCDVVLPLVAIATPI--EYTRNPLRVFELDFEENLRIIRYCVKY----------RKRIIFPSTSEV-YGMCSDKYFDEDH  133 (345)
T ss_dssp             HCSEEEECBCCCCHH--HHHHSHHHHHHHHTHHHHHHHHHHHHT----------TCEEEEECCGGG-GBTCCCSSBCTTT
T ss_pred             CCCEEEEcccccCcc--chhcCHHHHHHHHHHHHHHHHHHHHHh----------CCeEEEEecHHH-cCCCCCCCcCCcc
Confidence            479999999975421  123466789999999999988887542          259999999643 3221111111110


Q ss_pred             cC--CCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCcc-------chhHHHHHHHHHHh-
Q 019722          194 SR--NKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRER-------EGFITDLVFFLTSK-  263 (336)
Q Consensus       194 ~~--~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~-------~~~~~~~~~~~~~~-  263 (336)
                      ..  ..........|+.+|++.+.+++.++.+.   +  ++++.|+||.+.++.....       .............. 
T Consensus       134 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~--~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  208 (345)
T 2bll_A          134 SNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKE---G--LQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGS  208 (345)
T ss_dssp             CCCBCCCTTCGGGHHHHHHHHHHHHHHHHHHHH---C--CCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTC
T ss_pred             cccccCcccCcccccHHHHHHHHHHHHHHHHhc---C--CCEEEEcCCcccCCCcccccccccccccHHHHHHHHHHcCC
Confidence            00  00001344589999999999999998765   4  9999999999998875321       12222232222111 


Q ss_pred             ------------hcCChHHHHHHHHHHHhcCccccCCceeeccCccc-ccccCCCCHHHHHHHHHHHHHhhccCCC
Q 019722          264 ------------LLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEA-WTSKLGSNSNEASRLWAASELLVSRDPK  326 (336)
Q Consensus       264 ------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~-~~~~~~~~~~~~~~~w~~~~~~~~~~~~  326 (336)
                                  ....++|+|.+++.++..+. ....|+.|+..+.. ..+-        .++.+.+.+.++..+.
T Consensus       209 ~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~-~~~~g~~~~i~~~~~~~s~--------~e~~~~i~~~~g~~~~  275 (345)
T 2bll_A          209 PIKLIDGGKQKRCFTDIRDGIEALYRIIENAG-NRCDGEIINIGNPENEASI--------EELGEMLLASFEKHPL  275 (345)
T ss_dssp             CEEEGGGSCCEEECEEHHHHHHHHHHHHHCGG-GTTTTEEEEECCTTSEEEH--------HHHHHHHHHHHHTCTT
T ss_pred             CcEEECCCCEEEEEEEHHHHHHHHHHHHhhcc-ccCCCceEEeCCCCCCCCH--------HHHHHHHHHHhCCCcc
Confidence                        12356789999999987442 23468888777764 4443        6666777777766543

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=99.84  E-value=7.4e-21  Score=212.07  Aligned_cols=175  Identities=20%  Similarity=0.178  Sum_probs=137.7

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCE-EEEeeCChHH---HHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGAR-LVLPARSLKA---AEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~~-V~~~~r~~~~---~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      .+|++|||||++|||+++|+.|+++|++ |++++|+..+   ..+..++++..  +.++.++.||+++.++++++++++.
T Consensus      1883 ~~k~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~--g~~v~~~~~Dvsd~~~v~~~~~~~~ 1960 (2512)
T 2vz8_A         1883 PHKSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRRQ--GVQVLVSTSNASSLDGARSLITEAT 1960 (2512)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHHHHHHHHHHT--TCEEEEECCCSSSHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHHHHHHHHHhC--CCEEEEEecCCCCHHHHHHHHHHHH
Confidence            6899999999999999999999999995 8889998543   34445555543  6789999999999999999999987


Q ss_pred             hcCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcc
Q 019722          110 SLNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMI  187 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~  187 (336)
                      + +++||+||||||+....  .+++.++|++++++|+.|++++.+++.+.+.+       .++||++||.++..+     
T Consensus      1961 ~-~g~id~lVnnAgv~~~~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~-------~g~iV~iSS~ag~~g----- 2027 (2512)
T 2vz8_A         1961 Q-LGPVGGVFNLAMVLRDAVLENQTPEFFQDVSKPKYSGTANLDRVTREACPE-------LDYFVIFSSVSCGRG----- 2027 (2512)
T ss_dssp             H-HSCEEEEEECCCC----------------CTTTTHHHHHHHHHHHHHHCTT-------CCEEEEECCHHHHTT-----
T ss_pred             h-cCCCcEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhccc-------CCEEEEecchhhcCC-----
Confidence            5 78999999999976543  67889999999999999999999999998754       279999999988876     


Q ss_pred             cccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCce
Q 019722          188 RYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIV  241 (336)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v  241 (336)
                                  .+++..|+++|+++.+|++..+.+    |  +...++..|.+
T Consensus      2028 ------------~~g~~~Y~aaKaal~~l~~~rr~~----G--l~~~a~~~g~~ 2063 (2512)
T 2vz8_A         2028 ------------NAGQANYGFANSAMERICEKRRHD----G--LPGLAVQWGAI 2063 (2512)
T ss_dssp             ------------CTTCHHHHHHHHHHHHHHHHHHHT----T--SCCCEEEECCB
T ss_pred             ------------CCCcHHHHHHHHHHHHHHHHHHHC----C--CcEEEEEccCc
Confidence                        677889999999999999987654    4  66667776665

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=99.84  E-value=1.5e-19  Score=165.70  Aligned_cols=250  Identities=12%  Similarity=0.058  Sum_probs=170.1

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCCCc
Q 019722           36 VTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLPL  115 (336)
Q Consensus        36 k~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i  115 (336)
                      +++|||||+|+||++++++|+++|++|++++|+.....   +    .. ..++.++.+|+++++++.+++++     .++
T Consensus         2 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~---~----~~-~~~~~~~~~D~~~~~~~~~~~~~-----~~~   68 (330)
T 2c20_A            2 NSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHE---D----AI-TEGAKFYNGDLRDKAFLRDVFTQ-----ENI   68 (330)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCG---G----GS-CTTSEEEECCTTCHHHHHHHHHH-----SCE
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCch---h----hc-CCCcEEEECCCCCHHHHHHHHhh-----cCC
Confidence            58999999999999999999999999999998754321   1    11 23788999999999999888775     379


Q ss_pred             cEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcccccccccC
Q 019722          116 NLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISR  195 (336)
Q Consensus       116 d~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~~~~~  195 (336)
                      |+|||+||.....  .+.+++++.+++|+.++..+++++..    .+     .+++|++||... ++......+     +
T Consensus        69 d~vih~a~~~~~~--~~~~~~~~~~~~n~~~~~~l~~a~~~----~~-----~~~~v~~Ss~~~-~~~~~~~~~-----~  131 (330)
T 2c20_A           69 EAVMHFAADSLVG--VSMEKPLQYYNNNVYGALCLLEVMDE----FK-----VDKFIFSSTAAT-YGEVDVDLI-----T  131 (330)
T ss_dssp             EEEEECCCCCCHH--HHHHSHHHHHHHHHHHHHHHHHHHHH----TT-----CCEEEEECCGGG-GCSCSSSSB-----C
T ss_pred             CEEEECCcccCcc--ccccCHHHHHHHHhHHHHHHHHHHHH----cC-----CCEEEEeCCcee-eCCCCCCCC-----C
Confidence            9999999975321  13456788999999999999988643    22     369999999643 332111111     1


Q ss_pred             CCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCc--------cchhHHHHHHHHHHh----
Q 019722          196 NKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRE--------REGFITDLVFFLTSK----  263 (336)
Q Consensus       196 ~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~--------~~~~~~~~~~~~~~~----  263 (336)
                      +.....+...|+.+|++.+.+++.++.++   +  ++++.++||.+.++....        ...............    
T Consensus       132 E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~--~~~~ilrp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  206 (330)
T 2c20_A          132 EETMTNPTNTYGETKLAIEKMLHWYSQAS---N--LRYKIFRYFNVAGATPNGIIGEDHRPETHLIPLVLQVALGQREKI  206 (330)
T ss_dssp             TTSCCCCSSHHHHHHHHHHHHHHHHHHTS---S--CEEEEEECSEEECCCTTCSSCCCCSSCCSHHHHHHHHHTTSSSCE
T ss_pred             cCCCCCCCChHHHHHHHHHHHHHHHHHHh---C--CcEEEEecCcccCCCCcCccccccccccchHHHHHHHHhhcCCCe
Confidence            22223445689999999999999988764   4  999999999998875211        112222222221110    


Q ss_pred             ----------------hcCChHHHHHHHHHHHhcCccccCCceeeccCcccccccCCCCHHHHHHHHHHHHHhhccCCCC
Q 019722          264 ----------------LLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWTSKLGSNSNEASRLWAASELLVSRDPKS  327 (336)
Q Consensus       264 ----------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~  327 (336)
                                      ....++|+|.+++.++..+... ..|..|+..+....+-        .++.+.+.+.++...+.
T Consensus       207 ~~~g~~~~~~~g~~~~~~v~v~Dva~a~~~~~~~~~~~-~~~~~~ni~~~~~~s~--------~e~~~~i~~~~g~~~~~  277 (330)
T 2c20_A          207 MMFGDDYNTPDGTCIRDYIHVEDLVAAHFLGLKDLQNG-GESDFYNLGNGNGFSV--------KEIVDAVREVTNHEIPA  277 (330)
T ss_dssp             EEECSCCSSSSSSCEECEEEHHHHHHHHHHHHHHHHTT-CCCEEEECCCTTCBCH--------HHHHHHHHHHTTSCCCE
T ss_pred             EEeCCccccCCCceeEeeEeHHHHHHHHHHHHhccccC-CCCCeEEeCCCCCccH--------HHHHHHHHHHhCCCCce
Confidence                            0123688899988888643321 1356666665554443        66777777777766544


Q ss_pred             CC
Q 019722          328 VF  329 (336)
Q Consensus       328 ~~  329 (336)
                      .+
T Consensus       278 ~~  279 (330)
T 2c20_A          278 EV  279 (330)
T ss_dssp             EE
T ss_pred             ee
Confidence            33

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=99.84  E-value=1.3e-20  Score=165.12  Aligned_cols=204  Identities=11%  Similarity=0.023  Sum_probs=133.8

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCC-CEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhc
Q 019722           33 LSSVTAIITGATSGIGAETARVLAKRG-ARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSL  111 (336)
Q Consensus        33 l~gk~~lItGgs~gIG~aia~~L~~~G-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  111 (336)
                      +..|++|||||+|+||++++++|+++| ++|++++|+++++.+.        ...++.++++|++|++++.++++     
T Consensus        21 ~~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~--------~~~~~~~~~~Dl~d~~~~~~~~~-----   87 (236)
T 3qvo_A           21 GHMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKP--------YPTNSQIIMGDVLNHAALKQAMQ-----   87 (236)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSS--------CCTTEEEEECCTTCHHHHHHHHT-----
T ss_pred             CcccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhccc--------ccCCcEEEEecCCCHHHHHHHhc-----
Confidence            345899999999999999999999999 8999999998754321        13579999999999999998876     


Q ss_pred             CCCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcccccc
Q 019722          112 NLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLG  191 (336)
Q Consensus       112 ~~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~  191 (336)
                        ++|+||||||..         .+           ...++.+++.+++.+     .++||++||.......+....   
T Consensus        88 --~~D~vv~~a~~~---------~~-----------~~~~~~~~~~~~~~~-----~~~iV~iSS~~~~~~~~~~~~---  137 (236)
T 3qvo_A           88 --GQDIVYANLTGE---------DL-----------DIQANSVIAAMKACD-----VKRLIFVLSLGIYDEVPGKFV---  137 (236)
T ss_dssp             --TCSEEEEECCST---------TH-----------HHHHHHHHHHHHHTT-----CCEEEEECCCCC------------
T ss_pred             --CCCEEEEcCCCC---------ch-----------hHHHHHHHHHHHHcC-----CCEEEEEecceecCCCCcccc---
Confidence              689999999851         11           134567888887765     479999999765433111000   


Q ss_pred             cccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHHHHHHHHhhcCChHHH
Q 019722          192 QISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSKLLKTIPQG  271 (336)
Q Consensus       192 ~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~  271 (336)
                       .............|..+|..           +...|  |+++.|+||++.++...........   ........+++|+
T Consensus       138 -~~~~~~~~~~~~~~~~~~~~-----------l~~~g--i~~~~vrPg~i~~~~~~~~~~~~~~---~~~~~~~i~~~Dv  200 (236)
T 3qvo_A          138 -EWNNAVIGEPLKPFRRAADA-----------IEASG--LEYTILRPAWLTDEDIIDYELTSRN---EPFKGTIVSRKSV  200 (236)
T ss_dssp             --------CGGGHHHHHHHHH-----------HHTSC--SEEEEEEECEEECCSCCCCEEECTT---SCCSCSEEEHHHH
T ss_pred             -cchhhcccchHHHHHHHHHH-----------HHHCC--CCEEEEeCCcccCCCCcceEEeccC---CCCCCcEECHHHH
Confidence             00000012233445554432           23445  9999999999998865442110000   0001234678999


Q ss_pred             HHHHHHHHhcCccccCCceeeccCccc
Q 019722          272 AATTCYVAIHPRLVNVSGKYFADCNEA  298 (336)
Q Consensus       272 a~~~~~l~~~~~~~~~~G~~~~~~~~~  298 (336)
                      |..+++++..+. .++ |+.+..++..
T Consensus       201 A~~i~~ll~~~~-~~~-g~~~~i~~~~  225 (236)
T 3qvo_A          201 AALITDIIDKPE-KHI-GENIGINQPG  225 (236)
T ss_dssp             HHHHHHHHHSTT-TTT-TEEEEEECSS
T ss_pred             HHHHHHHHcCcc-ccc-CeeEEecCCC
Confidence            999999998554 344 7666666543

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.84  E-value=3.4e-19  Score=163.68  Aligned_cols=253  Identities=15%  Similarity=0.022  Sum_probs=166.0

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHH-HHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAE-EAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQF  108 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~-~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~  108 (336)
                      ...-.++++|||||+|+||++++++|+++|++|++++|+..... ...+.+.   ...++.++.+|+++++++.++++..
T Consensus         9 ~~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~~~~   85 (335)
T 1rpn_A            9 HHGSMTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELG---IEGDIQYEDGDMADACSVQRAVIKA   85 (335)
T ss_dssp             ------CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTT---CGGGEEEEECCTTCHHHHHHHHHHH
T ss_pred             cccccCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccccchhhcc---ccCceEEEECCCCCHHHHHHHHHHc
Confidence            34456789999999999999999999999999999999865321 1111111   1347899999999999999988765


Q ss_pred             HhcCCCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccc
Q 019722          109 HSLNLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIR  188 (336)
Q Consensus       109 ~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~  188 (336)
                           ++|+||||||.....  .+.++++..+++|+.++..+++++.+.    +    ..+++|++||... ++......
T Consensus        86 -----~~d~Vih~A~~~~~~--~~~~~~~~~~~~n~~~~~~l~~a~~~~----~----~~~~~v~~SS~~v-~g~~~~~~  149 (335)
T 1rpn_A           86 -----QPQEVYNLAAQSFVG--ASWNQPVTTGVVDGLGVTHLLEAIRQF----S----PETRFYQASTSEM-FGLIQAER  149 (335)
T ss_dssp             -----CCSEEEECCSCCCHH--HHTTSHHHHHHHHTHHHHHHHHHHHHH----C----TTSEEEEEEEGGG-GCSCSSSS
T ss_pred             -----CCCEEEECccccchh--hhhhChHHHHHHHHHHHHHHHHHHHHh----C----CCCeEEEEeCHHH-hCCCCCCC
Confidence                 689999999964321  123567889999999999999988653    1    0269999999643 32211111


Q ss_pred             ccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccc--hhHHHHHHHHHHh---
Q 019722          189 YLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRERE--GFITDLVFFLTSK---  263 (336)
Q Consensus       189 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~--~~~~~~~~~~~~~---  263 (336)
                      +     ++.....+...|+.+|++.+.+++.++.+++     +++..+.|+.+.++......  .............   
T Consensus       150 ~-----~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~-----~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~g~~~  219 (335)
T 1rpn_A          150 Q-----DENTPFYPRSPYGVAKLYGHWITVNYRESFG-----LHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQ  219 (335)
T ss_dssp             B-----CTTSCCCCCSHHHHHHHHHHHHHHHHHHHHC-----CCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCS
T ss_pred             C-----CcccCCCCCChhHHHHHHHHHHHHHHHHHcC-----CcEEEEeeCcccCCCCCCCcchHHHHHHHHHHHcCCCc
Confidence            1     1112233455799999999999999987753     77888999999887543211  1122222221111   


Q ss_pred             --h---------cCChHHHHHHHHHHHhcCccccCCceeeccCcccccccCCCCHHHHHHHHHHHHHhhccC
Q 019722          264 --L---------LKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWTSKLGSNSNEASRLWAASELLVSRD  324 (336)
Q Consensus       264 --~---------~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~  324 (336)
                        .         ...++|+|.+++.++..+.    .| .|+..+....+-        .++.+.+.+.++..
T Consensus       220 ~~~~g~g~~~~~~i~v~Dva~a~~~~~~~~~----~~-~~ni~~~~~~s~--------~e~~~~i~~~~g~~  278 (335)
T 1rpn_A          220 ELRLGNVDAKRDWGFAGDYVEAMWLMLQQDK----AD-DYVVATGVTTTV--------RDMCQIAFEHVGLD  278 (335)
T ss_dssp             CEEESCTTCEEECEEHHHHHHHHHHHHHSSS----CC-CEEECCSCEEEH--------HHHHHHHHHTTTCC
T ss_pred             eEEeCCCcceeceEEHHHHHHHHHHHHhcCC----CC-EEEEeCCCCccH--------HHHHHHHHHHhCCC
Confidence              0         1134888999999987543    24 444444444442        56666666666653

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=99.83  E-value=2.4e-20  Score=166.18  Aligned_cols=194  Identities=15%  Similarity=0.120  Sum_probs=145.7

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCCC
Q 019722           35 SVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLP  114 (336)
Q Consensus        35 gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  114 (336)
                      .|++|||||+|+||++++++|+++|++|++++|+..+..           ..++.++.+|+++++++.++++       +
T Consensus         2 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-----------~~~~~~~~~Dl~d~~~~~~~~~-------~   63 (267)
T 3ay3_A            2 LNRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAA-----------EAHEEIVACDLADAQAVHDLVK-------D   63 (267)
T ss_dssp             EEEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCCC-----------CTTEEECCCCTTCHHHHHHHHT-------T
T ss_pred             CceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCcccc-----------CCCccEEEccCCCHHHHHHHHc-------C
Confidence            378999999999999999999999999999999865310           1357899999999999888775       5


Q ss_pred             ccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccccccccc
Q 019722          115 LNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQIS  194 (336)
Q Consensus       115 id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~~~~  194 (336)
                      +|+||||||..      ..+++++.+++|+.++..+++++.+.    +     .++||++||.......+....+     
T Consensus        64 ~d~vi~~a~~~------~~~~~~~~~~~n~~~~~~l~~a~~~~----~-----~~~iv~~SS~~~~~~~~~~~~~-----  123 (267)
T 3ay3_A           64 CDGIIHLGGVS------VERPWNDILQANIIGAYNLYEAARNL----G-----KPRIVFASSNHTIGYYPRTTRI-----  123 (267)
T ss_dssp             CSEEEECCSCC------SCCCHHHHHHHTHHHHHHHHHHHHHT----T-----CCEEEEEEEGGGSTTSBTTSCB-----
T ss_pred             CCEEEECCcCC------CCCCHHHHHHHHHHHHHHHHHHHHHh----C-----CCEEEEeCCHHHhCCCCCCCCC-----
Confidence            89999999975      34567889999999999999988642    2     3699999997544321111111     


Q ss_pred             CCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCcee-CCCCCccchhHHHHHHHHHHhhcCChHHHHH
Q 019722          195 RNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVR-TRLTREREGFITDLVFFLTSKLLKTIPQGAA  273 (336)
Q Consensus       195 ~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~-T~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~  273 (336)
                      .+.....+...|+.+|++.+.+++.++.+   .+  ++++.|+||.+. ++...            -.......++++|.
T Consensus       124 ~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~g--i~~~~lrp~~v~~~~~~~------------~~~~~~~~~~dva~  186 (267)
T 3ay3_A          124 DTEVPRRPDSLYGLSKCFGEDLASLYYHK---FD--IETLNIRIGSCFPKPKDA------------RMMATWLSVDDFMR  186 (267)
T ss_dssp             CTTSCCCCCSHHHHHHHHHHHHHHHHHHT---TC--CCEEEEEECBCSSSCCSH------------HHHHHBCCHHHHHH
T ss_pred             CCCCCCCCCChHHHHHHHHHHHHHHHHHH---cC--CCEEEEeceeecCCCCCC------------CeeeccccHHHHHH
Confidence            11122334568999999999999988643   34  999999999984 43211            01233578899999


Q ss_pred             HHHHHHhcCc
Q 019722          274 TTCYVAIHPR  283 (336)
Q Consensus       274 ~~~~l~~~~~  283 (336)
                      .++.++..+.
T Consensus       187 ~~~~~~~~~~  196 (267)
T 3ay3_A          187 LMKRAFVAPK  196 (267)
T ss_dssp             HHHHHHHSSC
T ss_pred             HHHHHHhCCC
Confidence            9999987553

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.83  E-value=3.7e-19  Score=166.22  Aligned_cols=251  Identities=13%  Similarity=0.017  Sum_probs=165.2

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHH-----HHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHh
Q 019722           36 VTAIITGATSGIGAETARVLAKRGARLVLPARSLKA-----AEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHS  110 (336)
Q Consensus        36 k~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~-----~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  110 (336)
                      |++|||||+|+||++++++|+++|++|++++|+...     ++...+.+... .+.++.++.+|+++++++.++++.+  
T Consensus        25 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~--  101 (375)
T 1t2a_A           25 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAH-IEGNMKLHYGDLTDSTCLVKIINEV--  101 (375)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC----------CEEEEECCTTCHHHHHHHHHHH--
T ss_pred             cEEEEECCCchHHHHHHHHHHHCCCEEEEEECCccccchhhHHHHhhhhccc-cCCCceEEEccCCCHHHHHHHHHhc--
Confidence            789999999999999999999999999999998542     11111111000 1347889999999999999988765  


Q ss_pred             cCCCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccccc
Q 019722          111 LNLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYL  190 (336)
Q Consensus       111 ~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~  190 (336)
                         ++|+||||||.....  .+.++++..+++|+.++..+++++.+...+.      .++||++||...... ....++ 
T Consensus       102 ---~~d~vih~A~~~~~~--~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~------~~~iv~~SS~~~~~~-~~~~~~-  168 (375)
T 1t2a_A          102 ---KPTEIYNLGAQSHVK--ISFDLAEYTADVDGVGTLRLLDAVKTCGLIN------SVKFYQASTSELYGK-VQEIPQ-  168 (375)
T ss_dssp             ---CCSEEEECCSCCCHH--HHHHSHHHHHHHHTHHHHHHHHHHHHTTCTT------TCEEEEEEEGGGTCS-CSSSSB-
T ss_pred             ---CCCEEEECCCccccc--ccccCHHHHHHHHHHHHHHHHHHHHHhCCCc------cceEEEecchhhhCC-CCCCCC-
Confidence               689999999974321  1346678899999999999999987654311      269999999754322 111111 


Q ss_pred             ccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccc--hhHHHHHHHHHHh-----
Q 019722          191 GQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRERE--GFITDLVFFLTSK-----  263 (336)
Q Consensus       191 ~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~--~~~~~~~~~~~~~-----  263 (336)
                          ++.....+...|+.+|++.+.+++.++.+++     +.+..+.|+.+..+......  .............     
T Consensus       169 ----~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~-----~~~~i~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~  239 (375)
T 1t2a_A          169 ----KETTPFYPRSPYGAAKLYAYWIVVNFREAYN-----LFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECF  239 (375)
T ss_dssp             ----CTTSCCCCCSHHHHHHHHHHHHHHHHHHHHC-----CEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCE
T ss_pred             ----CccCCCCCCChhHHHHHHHHHHHHHHHHHhC-----CCEEEEecccccCCCCCCCcchHHHHHHHHHHHcCCCcee
Confidence                1111233456899999999999999998753     77778888888776533211  1112222211111     


Q ss_pred             h---------cCChHHHHHHHHHHHhcCccccCCceeeccCcccccccCCCCHHHHHHHHHHHHHhhccC
Q 019722          264 L---------LKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWTSKLGSNSNEASRLWAASELLVSRD  324 (336)
Q Consensus       264 ~---------~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~  324 (336)
                      .         ...++|+|.+++.++..+.    .|. |+..+....+-        .++.+.+.+.++..
T Consensus       240 ~~g~~~~~~~~i~v~Dva~a~~~~~~~~~----~~~-~ni~~~~~~s~--------~e~~~~i~~~~g~~  296 (375)
T 1t2a_A          240 SLGNLDAKRDWGHAKDYVEAMWLMLQNDE----PED-FVIATGEVHSV--------REFVEKSFLHIGKT  296 (375)
T ss_dssp             EESCTTCEECCEEHHHHHHHHHHHHHSSS----CCC-EEECCSCCEEH--------HHHHHHHHHHTTCC
T ss_pred             EeCCCCceeeeEEHHHHHHHHHHHHhcCC----Cce-EEEeCCCcccH--------HHHHHHHHHHhCCC
Confidence            0         1236888999998887543    244 44444433332        56666677777654

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=99.83  E-value=1.3e-19  Score=165.12  Aligned_cols=238  Identities=13%  Similarity=0.023  Sum_probs=131.9

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCCC
Q 019722           35 SVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLP  114 (336)
Q Consensus        35 gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  114 (336)
                      +|++|||||+|+||++++++|+++|++|++++|+...             + +  ++.+|+++++++.++++..     +
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-------------~-~--~~~~Dl~d~~~~~~~~~~~-----~   60 (315)
T 2ydy_A            2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRAR-------------P-K--FEQVNLLDSNAVHHIIHDF-----Q   60 (315)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC----------------------------------CHHHHHHH-----C
T ss_pred             CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCC-------------C-C--eEEecCCCHHHHHHHHHhh-----C
Confidence            5899999999999999999999999999999987543             1 1  6789999999998888764     6


Q ss_pred             ccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccccccccc
Q 019722          115 LNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQIS  194 (336)
Q Consensus       115 id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~~~~  194 (336)
                      +|+||||||.....  .+.+++++.+++|+.++..+++++.+.          ++++|++||.....+  ...++     
T Consensus        61 ~d~vih~A~~~~~~--~~~~~~~~~~~~n~~~~~~l~~a~~~~----------~~~~v~~SS~~v~~~--~~~~~-----  121 (315)
T 2ydy_A           61 PHVIVHCAAERRPD--VVENQPDAASQLNVDASGNLAKEAAAV----------GAFLIYISSDYVFDG--TNPPY-----  121 (315)
T ss_dssp             CSEEEECC---------------------CHHHHHHHHHHHHH----------TCEEEEEEEGGGSCS--SSCSB-----
T ss_pred             CCEEEECCcccChh--hhhcCHHHHHHHHHHHHHHHHHHHHHc----------CCeEEEEchHHHcCC--CCCCC-----
Confidence            89999999975432  245678899999999999999998762          259999999765322  11111     


Q ss_pred             CCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHHH-HH--H-----HHhhcC
Q 019722          195 RNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLV-FF--L-----TSKLLK  266 (336)
Q Consensus       195 ~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~-~~--~-----~~~~~~  266 (336)
                      ++.....+...|+.+|++.+.+++.++.++.    .+|++.|. |...++...-......... ..  +     ......
T Consensus       122 ~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~----~lR~~~v~-G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  196 (315)
T 2ydy_A          122 REEDIPAPLNLYGKTKLDGEKAVLENNLGAA----VLRIPILY-GEVEKLEESAVTVMFDKVQFSNKSANMDHWQQRFPT  196 (315)
T ss_dssp             CTTSCCCCCSHHHHHHHHHHHHHHHHCTTCE----EEEECSEE-CSCSSGGGSTTGGGHHHHHCCSSCEEEECSSBBCCE
T ss_pred             CCCCCCCCcCHHHHHHHHHHHHHHHhCCCeE----EEeeeeee-CCCCcccccHHHHHHHHHHhcCCCeeeccCceECcE
Confidence            1112233456899999999999988743221    14444444 4333310001111111111 00  0     001123


Q ss_pred             ChHHHHHHHHHHHhcCccccCCceeeccCcccccccCCCCHHHHHHHHHHHHHhhccCC
Q 019722          267 TIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWTSKLGSNSNEASRLWAASELLVSRDP  325 (336)
Q Consensus       267 ~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~  325 (336)
                      .++|+|.++++++..+......|..|+.++....+-        .++.+.+.+.++...
T Consensus       197 ~v~Dva~a~~~~~~~~~~~~~~~~~~~i~~~~~~s~--------~e~~~~i~~~~g~~~  247 (315)
T 2ydy_A          197 HVKDVATVCRQLAEKRMLDPSIKGTFHWSGNEQMTK--------YEMACAIADAFNLPS  247 (315)
T ss_dssp             EHHHHHHHHHHHHHHHHTCTTCCEEEECCCSCCBCH--------HHHHHHHHHHTTCCC
T ss_pred             EHHHHHHHHHHHHHhhccccCCCCeEEEcCCCcccH--------HHHHHHHHHHhCCCh
Confidence            578999999998874311223577777777665553        677777777777654

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=99.82  E-value=1.2e-20  Score=163.82  Aligned_cols=217  Identities=12%  Similarity=0.015  Sum_probs=151.8

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCCCc
Q 019722           36 VTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLPL  115 (336)
Q Consensus        36 k~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i  115 (336)
                      +++|||||+|+||++++++|+++|++|++++|++++....         ..++.++++|++|++++.++++       ++
T Consensus         5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---------~~~~~~~~~Dl~d~~~~~~~~~-------~~   68 (227)
T 3dhn_A            5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIE---------NEHLKVKKADVSSLDEVCEVCK-------GA   68 (227)
T ss_dssp             CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCC---------CTTEEEECCCTTCHHHHHHHHT-------TC
T ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhc---------cCceEEEEecCCCHHHHHHHhc-------CC
Confidence            6899999999999999999999999999999997654211         2579999999999999988876       58


Q ss_pred             cEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcccccccccC
Q 019722          116 NLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISR  195 (336)
Q Consensus       116 d~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~~~~~  195 (336)
                      |+||||||....        ..+.+++|+.+...+++++...    +     .+++|++||.......+.....+     
T Consensus        69 d~vi~~a~~~~~--------~~~~~~~n~~~~~~l~~~~~~~----~-----~~~~v~~Ss~~~~~~~~~~~~~~-----  126 (227)
T 3dhn_A           69 DAVISAFNPGWN--------NPDIYDETIKVYLTIIDGVKKA----G-----VNRFLMVGGAGSLFIAPGLRLMD-----  126 (227)
T ss_dssp             SEEEECCCC--------------CCSHHHHHHHHHHHHHHHT----T-----CSEEEEECCSTTSEEETTEEGGG-----
T ss_pred             CEEEEeCcCCCC--------ChhHHHHHHHHHHHHHHHHHHh----C-----CCEEEEeCChhhccCCCCCcccc-----
Confidence            999999986421        1236788999988888876542    2     35999999987654422211111     


Q ss_pred             CCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHHHH--HHHHhhcCChHHHHH
Q 019722          196 NKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVF--FLTSKLLKTIPQGAA  273 (336)
Q Consensus       196 ~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~--~~~~~~~~~~~~~a~  273 (336)
                        ........|+.+|++.+.+.+.++.+   .+  ++++.++||.+.++......-.......  .-.......++|+|.
T Consensus       127 --~~~~p~~~Y~~sK~~~e~~~~~~~~~---~~--~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~  199 (227)
T 3dhn_A          127 --SGEVPENILPGVKALGEFYLNFLMKE---KE--IDWVFFSPAADMRPGVRTGRYRLGKDDMIVDIVGNSHISVEDYAA  199 (227)
T ss_dssp             --TTCSCGGGHHHHHHHHHHHHHTGGGC---CS--SEEEEEECCSEEESCCCCCCCEEESSBCCCCTTSCCEEEHHHHHH
T ss_pred             --CCcchHHHHHHHHHHHHHHHHHHhhc---cC--ccEEEEeCCcccCCCccccceeecCCCcccCCCCCcEEeHHHHHH
Confidence              11334567999999999988887753   34  9999999999987754321100000000  000012346899999


Q ss_pred             HHHHHHhcCccccCCceeeccCccccc
Q 019722          274 TTCYVAIHPRLVNVSGKYFADCNEAWT  300 (336)
Q Consensus       274 ~~~~l~~~~~~~~~~G~~~~~~~~~~~  300 (336)
                      +++.++.++..   .|+.+...+....
T Consensus       200 ai~~~l~~~~~---~g~~~~~~~~~~~  223 (227)
T 3dhn_A          200 AMIDELEHPKH---HQERFTIGYLEHH  223 (227)
T ss_dssp             HHHHHHHSCCC---CSEEEEEECCSCC
T ss_pred             HHHHHHhCccc---cCcEEEEEeehhc
Confidence            99999987653   6777776665443

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=99.82  E-value=3.4e-20  Score=170.66  Aligned_cols=231  Identities=15%  Similarity=0.133  Sum_probs=148.3

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHH--HHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcC
Q 019722           35 SVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEE--AKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLN  112 (336)
Q Consensus        35 gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~--~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  112 (336)
                      +|++|||||+|+||++++++|+++|++|+++.|+.+...+  ....+. .  ..++.++++|+++++++.++++      
T Consensus         9 ~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~~~~~~~~~-~--~~~~~~~~~Dl~d~~~~~~~~~------   79 (338)
T 2rh8_A            9 KKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQ-E--LGDLKIFRADLTDELSFEAPIA------   79 (338)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTHHHHHHG-G--GSCEEEEECCTTTSSSSHHHHT------
T ss_pred             CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcchhhhHHHHHhcC-C--CCcEEEEecCCCChHHHHHHHc------
Confidence            6899999999999999999999999999999988653221  112222 1  3468899999999988877764      


Q ss_pred             CCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCc---ccc
Q 019722          113 LPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDM---IRY  189 (336)
Q Consensus       113 ~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~---~~~  189 (336)
                       ++|+|||+|+.....   ..+..++.+++|+.+++.+++++.+..   .     .++||++||.++.++.+..   ...
T Consensus        80 -~~D~Vih~A~~~~~~---~~~~~~~~~~~nv~gt~~ll~aa~~~~---~-----v~r~V~~SS~~~~~~~~~~~~~~~~  147 (338)
T 2rh8_A           80 -GCDFVFHVATPVHFA---SEDPENDMIKPAIQGVVNVMKACTRAK---S-----VKRVILTSSAAAVTINQLDGTGLVV  147 (338)
T ss_dssp             -TCSEEEEESSCCCC------------CHHHHHHHHHHHHHHHHCT---T-----CCEEEEECCHHHHHHHHHTCSCCCC
T ss_pred             -CCCEEEEeCCccCCC---CCCcHHHHHHHHHHHHHHHHHHHHHcC---C-----cCEEEEEecHHHeecCCcCCCCccc
Confidence             589999999864211   112234589999999999999887642   1     2699999997644321100   011


Q ss_pred             cccccCCCCC----CChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCcc-chhHHHHH-------
Q 019722          190 LGQISRNKSH----YDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRER-EGFITDLV-------  257 (336)
Q Consensus       190 ~~~~~~~~~~----~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~-~~~~~~~~-------  257 (336)
                      ++........    .+....|+.||++.+.+++.++.+.   |  ++++.|+||.+.++..... ........       
T Consensus       148 ~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---g--i~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~  222 (338)
T 2rh8_A          148 DEKNWTDIEFLTSAKPPTWGYPASKTLAEKAAWKFAEEN---N--IDLITVIPTLMAGSSLTSDVPSSIGLAMSLITGNE  222 (338)
T ss_dssp             CTTTTTCC-------CCCCCCTTSCCHHHHHHHHHHHHH---T--CCEEEEEECEEESCCSSSSCCHHHHHHHHHHHTCH
T ss_pred             ChhhccchhhccccCCccchHHHHHHHHHHHHHHHHHHc---C--CcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCc
Confidence            1110000000    0011259999999999888877543   4  9999999999999975432 11111110       


Q ss_pred             HHHH---Hh-------hcCChHHHHHHHHHHHhcCccccCCceeecc
Q 019722          258 FFLT---SK-------LLKTIPQGAATTCYVAIHPRLVNVSGKYFAD  294 (336)
Q Consensus       258 ~~~~---~~-------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~  294 (336)
                      ....   ..       ....++|+|.++++++..+.   ..|.++..
T Consensus       223 ~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~---~~~~~~~~  266 (338)
T 2rh8_A          223 FLINGMKGMQMLSGSVSIAHVEDVCRAHIFVAEKES---ASGRYICC  266 (338)
T ss_dssp             HHHHHHHHHHHHHSSEEEEEHHHHHHHHHHHHHCTT---CCEEEEEC
T ss_pred             cccccccccccccCcccEEEHHHHHHHHHHHHcCCC---cCCcEEEe
Confidence            0000   00       25678999999999886432   35666543

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=99.81  E-value=6.4e-19  Score=158.82  Aligned_cols=218  Identities=17%  Similarity=0.138  Sum_probs=154.6

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCCCc
Q 019722           36 VTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLPL  115 (336)
Q Consensus        36 k~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i  115 (336)
                      +++|||||+|+||++++++|+++|++|++++|+                       ++|+++++++.++++..     ++
T Consensus        13 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~-----------------------~~Dl~d~~~~~~~~~~~-----~~   64 (292)
T 1vl0_A           13 MKILITGANGQLGREIQKQLKGKNVEVIPTDVQ-----------------------DLDITNVLAVNKFFNEK-----KP   64 (292)
T ss_dssp             EEEEEESTTSHHHHHHHHHHTTSSEEEEEECTT-----------------------TCCTTCHHHHHHHHHHH-----CC
T ss_pred             ceEEEECCCChHHHHHHHHHHhCCCeEEeccCc-----------------------cCCCCCHHHHHHHHHhc-----CC
Confidence            899999999999999999999999999999996                       37999999999888765     68


Q ss_pred             cEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcccccccccC
Q 019722          116 NLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISR  195 (336)
Q Consensus       116 d~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~~~~~  195 (336)
                      |+||||||....  ....+++++.+++|+.++..+++++.+.          +.++|++||...... .....+     +
T Consensus        65 d~vih~A~~~~~--~~~~~~~~~~~~~nv~~~~~l~~a~~~~----------~~~iv~~SS~~v~~~-~~~~~~-----~  126 (292)
T 1vl0_A           65 NVVINCAAHTAV--DKCEEQYDLAYKINAIGPKNLAAAAYSV----------GAEIVQISTDYVFDG-EAKEPI-----T  126 (292)
T ss_dssp             SEEEECCCCCCH--HHHHHCHHHHHHHHTHHHHHHHHHHHHH----------TCEEEEEEEGGGSCS-CCSSCB-----C
T ss_pred             CEEEECCccCCH--HHHhcCHHHHHHHHHHHHHHHHHHHHHc----------CCeEEEechHHeECC-CCCCCC-----C
Confidence            999999996432  1234678899999999999999998762          249999999754322 111111     1


Q ss_pred             CCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHHHHHHHHh-----------h
Q 019722          196 NKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSK-----------L  264 (336)
Q Consensus       196 ~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~-----------~  264 (336)
                      +.....+...|+.+|++.+.+++.++.         .+..|.|+.+.++ ...   ............           .
T Consensus       127 E~~~~~~~~~Y~~sK~~~E~~~~~~~~---------~~~~lR~~~v~G~-~~~---~~~~~~~~~~~~~~~~~~~~~~~~  193 (292)
T 1vl0_A          127 EFDEVNPQSAYGKTKLEGENFVKALNP---------KYYIVRTAWLYGD-GNN---FVKTMINLGKTHDELKVVHDQVGT  193 (292)
T ss_dssp             TTSCCCCCSHHHHHHHHHHHHHHHHCS---------SEEEEEECSEESS-SSC---HHHHHHHHHHHCSEEEEESSCEEC
T ss_pred             CCCCCCCccHHHHHHHHHHHHHHhhCC---------CeEEEeeeeeeCC-CcC---hHHHHHHHHhcCCcEEeecCeeeC
Confidence            111223356799999999999987642         3567888888876 222   222222222111           1


Q ss_pred             cCChHHHHHHHHHHHhcCccccCCceeeccCcccccccCCCCHHHHHHHHHHHHHhhccCC
Q 019722          265 LKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWTSKLGSNSNEASRLWAASELLVSRDP  325 (336)
Q Consensus       265 ~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~  325 (336)
                      ...++|+|.++++++..+     .|..|+.++....+.        .++.+.+.+.++...
T Consensus       194 ~i~v~Dva~~~~~~~~~~-----~~~~~~i~~~~~~s~--------~e~~~~i~~~~g~~~  241 (292)
T 1vl0_A          194 PTSTVDLARVVLKVIDEK-----NYGTFHCTCKGICSW--------YDFAVEIFRLTGIDV  241 (292)
T ss_dssp             CEEHHHHHHHHHHHHHHT-----CCEEEECCCBSCEEH--------HHHHHHHHHHHCCCC
T ss_pred             CccHHHHHHHHHHHHhcC-----CCcEEEecCCCCccH--------HHHHHHHHHHhCCCC
Confidence            124789999999998753     467777776655553        666677777777653

>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}

Probab=99.81  E-value=7.8e-19  Score=159.39  Aligned_cols=252  Identities=13%  Similarity=0.014  Sum_probs=170.1

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHh
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHS  110 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  110 (336)
                      ++|+++++|||||+|+||++++++|+++|+      +.             ......+.++++|++|++++.++++..  
T Consensus         2 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~------~~-------------~~~~~~~~~~~~D~~d~~~~~~~~~~~--   60 (319)
T 4b8w_A            2 LYFQSMRILVTGGSGLVGKAIQKVVADGAG------LP-------------GEDWVFVSSKDADLTDTAQTRALFEKV--   60 (319)
T ss_dssp             CCCCCCEEEEETCSSHHHHHHHHHHHTTTC------CT-------------TCEEEECCTTTCCTTSHHHHHHHHHHS--
T ss_pred             ccccCCeEEEECCCcHHHHHHHHHHHhcCC------cc-------------cccccccCceecccCCHHHHHHHHhhc--
Confidence            357889999999999999999999999997      10             000123444578999999999888752  


Q ss_pred             cCCCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccccc
Q 019722          111 LNLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYL  190 (336)
Q Consensus       111 ~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~  190 (336)
                         ++|+|||+|+..... ....++.++.+++|+.++..+++++...    +     .+++|++||.. .++.....+++
T Consensus        61 ---~~d~Vih~A~~~~~~-~~~~~~~~~~~~~nv~gt~~ll~a~~~~----~-----~~~~v~~SS~~-vyg~~~~~~~~  126 (319)
T 4b8w_A           61 ---QPTHVIHLAAMVGGL-FRNIKYNLDFWRKNVHMNDNVLHSAFEV----G-----ARKVVSCLSTC-IFPDKTTYPID  126 (319)
T ss_dssp             ---CCSEEEECCCCCCCH-HHHTTCHHHHHHHHHHHHHHHHHHHHHT----T-----CSEEEEECCGG-GSCSSCCSSBC
T ss_pred             ---CCCEEEECceecccc-cccccCHHHHHHHHHHHHHHHHHHHHHc----C-----CCeEEEEcchh-hcCCCCCCCcc
Confidence               699999999974321 1234566788999999999998887542    2     35899999974 33322222222


Q ss_pred             ccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCcc---chhHHHHHHH----HHHh
Q 019722          191 GQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRER---EGFITDLVFF----LTSK  263 (336)
Q Consensus       191 ~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~---~~~~~~~~~~----~~~~  263 (336)
                      +.........+....|+.+|.+.+.+++.++.+.   +  ++++.++|+.+.++.....   ......+...    ....
T Consensus       127 E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~---~--~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~  201 (319)
T 4b8w_A          127 ETMIHNGPPHNSNFGYSYAKRMIDVQNRAYFQQY---G--CTFTAVIPTNVFGPHDNFNIEDGHVLPGLIHKVHLAKSSG  201 (319)
T ss_dssp             GGGGGBSCCCSSSHHHHHHHHHHHHHHHHHHHHH---C--CEEEEEEECEEECTTCCCCTTTSCHHHHHHHHHHHHHHHT
T ss_pred             ccccccCCCCCCcchHHHHHHHHHHHHHHHHHhh---C--CCEEEEeeccccCCCCCCCCccccccHHHHHHHHHHhccC
Confidence            2110000113344469999999999999998775   3  9999999999998865421   1122222222    2111


Q ss_pred             h-------------cCChHHHHHHHHHHHhcCccccCCceeeccCcccccccCCCCHHHHHHHHHHHHHhhccCCCCCCC
Q 019722          264 L-------------LKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWTSKLGSNSNEASRLWAASELLVSRDPKSVFD  330 (336)
Q Consensus       264 ~-------------~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~  330 (336)
                      .             ...++|+|.+++.++..+..  ..|..|+..+....+-        .++.+.+.+.++...+..+.
T Consensus       202 ~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~--~~~~~~ni~~~~~~s~--------~e~~~~i~~~~g~~~~~~~~  271 (319)
T 4b8w_A          202 SALTVWGTGNPRRQFIYSLDLAQLFIWVLREYNE--VEPIILSVGEEDEVSI--------KEAAEAVVEAMDFHGEVTFD  271 (319)
T ss_dssp             CCEEEESCSCCEECEEEHHHHHHHHHHHHHHCCC--SSCEEECCCGGGCEEH--------HHHHHHHHHHTTCCSCEEEE
T ss_pred             CceEEeCCCCeeEEEEeHHHHHHHHHHHHhcccc--CCceEEEecCCCceeH--------HHHHHHHHHHhCCCCcEEeC
Confidence            0             12468899999999875432  3567787777666654        77888888888877665555


Q ss_pred             CC
Q 019722          331 PL  332 (336)
Q Consensus       331 p~  332 (336)
                      |.
T Consensus       272 ~~  273 (319)
T 4b8w_A          272 TT  273 (319)
T ss_dssp             TT
T ss_pred             CC
Confidence            43

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=99.81  E-value=2.3e-18  Score=166.21  Aligned_cols=240  Identities=17%  Similarity=0.141  Sum_probs=157.7

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHC---CCEEEEeeCChHHHHHHHHHHHhhCC--------------CCceEEEe
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKR---GARLVLPARSLKAAEEAKARLASDCP--------------GSDIVVLP   92 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~---G~~V~~~~r~~~~~~~~~~~l~~~~~--------------~~~~~~~~   92 (336)
                      .+..++|+||||||+|+||++++++|+++   |++|++++|+..... ..+.+++...              ..++.++.
T Consensus        68 ~~~~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~  146 (478)
T 4dqv_A           68 GPSPELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDED-ARRRLEKTFDSGDPELLRHFKELAADRLEVVA  146 (478)
T ss_dssp             CCCSCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHH-HHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEE
T ss_pred             CCCCCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHH-HHHHHHHHHHhcchhhhhhhhhhccCceEEEE
Confidence            45678999999999999999999999999   899999999876442 2233322221              25899999


Q ss_pred             ccCC------CHHHHHHHHHHHHhcCCCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCC
Q 019722           93 LDLS------SLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATG  166 (336)
Q Consensus        93 ~Dl~------~~~~v~~~~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~  166 (336)
                      +|++      +.+.+..+++       ++|+||||||....      +.+++.+++|+.++..+++++...    +    
T Consensus       147 ~Dl~~~~~gld~~~~~~~~~-------~~D~Vih~Aa~~~~------~~~~~~~~~Nv~gt~~ll~aa~~~----~----  205 (478)
T 4dqv_A          147 GDKSEPDLGLDQPMWRRLAE-------TVDLIVDSAAMVNA------FPYHELFGPNVAGTAELIRIALTT----K----  205 (478)
T ss_dssp             CCTTSGGGGCCHHHHHHHHH-------HCCEEEECCSSCSB------SSCCEEHHHHHHHHHHHHHHHTSS----S----
T ss_pred             eECCCcccCCCHHHHHHHHc-------CCCEEEECccccCC------cCHHHHHHHHHHHHHHHHHHHHhC----C----
Confidence            9999      4556666655       58999999997643      556788999999999998887542    1    


Q ss_pred             CCCeEEEEcCCccccccCCcccccccc--cC--C--CCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCc
Q 019722          167 IQGRIVNVSSSIHSWFSGDMIRYLGQI--SR--N--KSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGI  240 (336)
Q Consensus       167 ~~grIV~vsS~~~~~~~~~~~~~~~~~--~~--~--~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~  240 (336)
                       .+++|++||.+. ++......+.+..  ..  .  .........|+.+|.+.+.+++.++.+.   |  ++++.|+||.
T Consensus       206 -~~~~V~iSS~~v-~~~~~~~~~~E~~~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---g--i~~~ivRpg~  278 (478)
T 4dqv_A          206 -LKPFTYVSTADV-GAAIEPSAFTEDADIRVISPTRTVDGGWAGGYGTSKWAGEVLLREANDLC---A--LPVAVFRCGM  278 (478)
T ss_dssp             -CCCEEEEEEGGG-GTTSCTTTCCSSSCHHHHCCEEECCTTSEECHHHHHHHHHHHHHHHHHHH---C--CCEEEEEECE
T ss_pred             -CCeEEEEeehhh-cCccCCCCcCCcccccccCcccccccccccchHHHHHHHHHHHHHHHHHh---C--CCeEEEECce
Confidence             358999999643 2211111111000  00  0  0000112349999999999999998764   4  9999999999


Q ss_pred             eeCCCC-C---ccchhHHHHHHHHHHh-h--------------------cCChHHHHHHHHHHHhcCcc-ccCCceeecc
Q 019722          241 VRTRLT-R---EREGFITDLVFFLTSK-L--------------------LKTIPQGAATTCYVAIHPRL-VNVSGKYFAD  294 (336)
Q Consensus       241 v~T~~~-~---~~~~~~~~~~~~~~~~-~--------------------~~~~~~~a~~~~~l~~~~~~-~~~~G~~~~~  294 (336)
                      |.++.. .   ....++..+....... .                    ....+++|.+++.++..... ....|+.|+.
T Consensus       279 v~G~~~~~g~~~~~~~~~~l~~~~~~~g~~P~~~~~~~~~G~~~~~~~~~v~vdDvA~ai~~~~~~~~~~~~~~~~~ynv  358 (478)
T 4dqv_A          279 ILADTSYAGQLNMSDWVTRMVLSLMATGIAPRSFYEPDSEGNRQRAHFDGLPVTFVAEAIAVLGARVAGSSLAGFATYHV  358 (478)
T ss_dssp             EECCSSSSSCCCTTBHHHHHHHHHHHHCEEESCSBCCCTTSCCCCCCCCEEEHHHHHHHHHHHHHTTC-CCCCSEEEEEE
T ss_pred             eeCCCccCCcCCHHHHHHHHHHHHHHcCcccccccccccccccccceeeeeeHHHHHHHHHHHHhhcccCCCCCCceEEe
Confidence            987632 1   1123333333322221 1                    12357889999988864211 1124667766


Q ss_pred             Cccc
Q 019722          295 CNEA  298 (336)
Q Consensus       295 ~~~~  298 (336)
                      .+..
T Consensus       359 ~~~~  362 (478)
T 4dqv_A          359 MNPH  362 (478)
T ss_dssp             SCCC
T ss_pred             cCCC
Confidence            6654

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=99.81  E-value=2.7e-18  Score=156.68  Aligned_cols=242  Identities=12%  Similarity=0.037  Sum_probs=163.7

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCC
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNL  113 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  113 (336)
                      +++++|||||+|+||++++++|+++|++|+++.|+.                      .+|+++.+++.++++..     
T Consensus         2 ~~~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~~----------------------~~D~~d~~~~~~~~~~~-----   54 (321)
T 1e6u_A            2 AKQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD----------------------ELNLLDSRAVHDFFASE-----   54 (321)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT----------------------TCCTTCHHHHHHHHHHH-----
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEecCc----------------------cCCccCHHHHHHHHHhc-----
Confidence            468999999999999999999999999999988762                      26999999998888754     


Q ss_pred             CccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcccccccc
Q 019722          114 PLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQI  193 (336)
Q Consensus       114 ~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~~~  193 (336)
                      ++|+|||+|+..... ....++.++.+++|+.++..+++++...    +     .+++|++||.... +......+++..
T Consensus        55 ~~d~vih~a~~~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~-----~~~~v~~SS~~vy-g~~~~~~~~E~~  123 (321)
T 1e6u_A           55 RIDQVYLAAAKVGGI-VANNTYPADFIYQNMMIESNIIHAAHQN----D-----VNKLLFLGSSCIY-PKLAKQPMAESE  123 (321)
T ss_dssp             CCSEEEECCCCCCCH-HHHHHCHHHHHHHHHHHHHHHHHHHHHT----T-----CCEEEEECCGGGS-CTTCCSSBCGGG
T ss_pred             CCCEEEEcCeecCCc-chhhhCHHHHHHHHHHHHHHHHHHHHHh----C-----CCeEEEEccHHHc-CCCCCCCcCccc
Confidence            689999999975321 1123456788999999999999887652    1     2599999996543 211111111111


Q ss_pred             cCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCcc---chhHHHHHHHHHH-------h
Q 019722          194 SRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRER---EGFITDLVFFLTS-------K  263 (336)
Q Consensus       194 ~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~---~~~~~~~~~~~~~-------~  263 (336)
                      .......+....|+.+|++.+.+++.++.+.   +  ++++.|+||.+.++.....   ......+...+..       .
T Consensus       124 ~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~---~--~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  198 (321)
T 1e6u_A          124 LLQGTLEPTNEPYAIAKIAGIKLCESYNRQY---G--RDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPD  198 (321)
T ss_dssp             TTSSCCCGGGHHHHHHHHHHHHHHHHHHHHH---C--CEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSE
T ss_pred             cccCCCCCCCCccHHHHHHHHHHHHHHHHHh---C--CCEEEEEeCCcCCcCCCCCCCCCccHHHHHHHHHHhhhcCCCc
Confidence            0000112334589999999999999998765   4  9999999999998865421   1223333332221       0


Q ss_pred             h--c---------CChHHHHHHHHHHHhcCccc-----cCCceeeccCcccccccCCCCHHHHHHHHHHHHHhhccCCC
Q 019722          264 L--L---------KTIPQGAATTCYVAIHPRLV-----NVSGKYFADCNEAWTSKLGSNSNEASRLWAASELLVSRDPK  326 (336)
Q Consensus       264 ~--~---------~~~~~~a~~~~~l~~~~~~~-----~~~G~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~  326 (336)
                      .  .         ..++|+|.+++.++..+...     ...|..|+..+....+-        .++.+.+.+.++....
T Consensus       199 ~~~~~~g~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~--------~e~~~~i~~~~g~~~~  269 (321)
T 1e6u_A          199 VVVWGSGTPMREFLHVDDMAAASIHVMELAHEVWLENTQPMLSHINVGTGVDCTI--------RELAQTIAKVVGYKGR  269 (321)
T ss_dssp             EEEESCSCCEECEEEHHHHHHHHHHHHHSCHHHHHHTSBTTBCCEEESCSCCEEH--------HHHHHHHHHHHTCCSE
T ss_pred             eEEcCCCCEEEEeEEHHHHHHHHHHHHhCcccccccccccCCceEEeCCCCCccH--------HHHHHHHHHHhCCCCc
Confidence            0  1         15688999999998755421     12355666655544442        6677777777776543

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=99.81  E-value=2.6e-19  Score=162.71  Aligned_cols=242  Identities=12%  Similarity=0.037  Sum_probs=162.1

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHC--CCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcC
Q 019722           35 SVTAIITGATSGIGAETARVLAKR--GARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLN  112 (336)
Q Consensus        35 gk~~lItGgs~gIG~aia~~L~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  112 (336)
                      ++++|||||+|+||.+++++|+++  |++|++++|+.....     +.     .++.++.+|+++.+++.+++++.    
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-----~~-----~~~~~~~~D~~d~~~~~~~~~~~----   67 (312)
T 2yy7_A            2 NPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTD-----VV-----NSGPFEVVNALDFNQIEHLVEVH----   67 (312)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCH-----HH-----HSSCEEECCTTCHHHHHHHHHHT----
T ss_pred             CceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCcccc-----cc-----CCCceEEecCCCHHHHHHHHhhc----
Confidence            478999999999999999999999  899999999865421     11     14668899999999998888653    


Q ss_pred             CCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccccccc
Q 019722          113 LPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQ  192 (336)
Q Consensus       113 ~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~~  192 (336)
                       ++|+|||+||.....   ..+++++.+++|+.++..+++++.+.    +     .+++|++||...........     
T Consensus        68 -~~d~vih~a~~~~~~---~~~~~~~~~~~n~~~~~~l~~~~~~~----~-----~~~~v~~SS~~~~~~~~~~~-----  129 (312)
T 2yy7_A           68 -KITDIYLMAALLSAT---AEKNPAFAWDLNMNSLFHVLNLAKAK----K-----IKKIFWPSSIAVFGPTTPKE-----  129 (312)
T ss_dssp             -TCCEEEECCCCCHHH---HHHCHHHHHHHHHHHHHHHHHHHHTT----S-----CSEEECCEEGGGCCTTSCSS-----
T ss_pred             -CCCEEEECCccCCCc---hhhChHHHHHHHHHHHHHHHHHHHHc----C-----CCEEEEeccHHHhCCCCCCC-----
Confidence             689999999964321   23567889999999999999887652    1     36999999965432211100     


Q ss_pred             ccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccc---h-hHHHHHHHHHHhh----
Q 019722          193 ISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRERE---G-FITDLVFFLTSKL----  264 (336)
Q Consensus       193 ~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~---~-~~~~~~~~~~~~~----  264 (336)
                      ..++.....+...|+.+|++.+.+++.++.+.   +  ++++.++|+.+.++......   . ....+...+....    
T Consensus       130 ~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~--~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  204 (312)
T 2yy7_A          130 NTPQYTIMEPSTVYGISKQAGERWCEYYHNIY---G--VDVRSIRYPGLISWSTPPGGGTTDYAVDIFYKAIADKKYECF  204 (312)
T ss_dssp             SBCSSCBCCCCSHHHHHHHHHHHHHHHHHHHH---C--CEEECEEECEEECSSSCCCSCTTTHHHHHHHHHHHTSEEEES
T ss_pred             CccccCcCCCCchhHHHHHHHHHHHHHHHHhc---C--CcEEEEeCCeEecCCCCCCCchhhhHHHHHHHHHcCCCeEEe
Confidence            11111112345679999999999999988765   4  99999999999986532211   1 1222222221111    


Q ss_pred             --------cCChHHHHHHHHHHHhcCccccCCceeeccCcccccccCCCCHHHHHHHHHHHHHhhc
Q 019722          265 --------LKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWTSKLGSNSNEASRLWAASELLVS  322 (336)
Q Consensus       265 --------~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~  322 (336)
                              ...++|+|.+++.++..+....-.|+.|+..+ ...+.        .++.+.+.+.++
T Consensus       205 ~~~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~ni~~-~~~s~--------~e~~~~i~~~~~  261 (312)
T 2yy7_A          205 LSSETKMPMMYMDDAIDATINIMKAPVEKIKIHSSYNLAA-MSFTP--------TEIANEIKKHIP  261 (312)
T ss_dssp             SCTTCCEEEEEHHHHHHHHHHHHHSCGGGCCCSSCEECCS-EEECH--------HHHHHHHHTTCT
T ss_pred             cCCCceeeeeeHHHHHHHHHHHHhCcccccccCceEEeCC-CccCH--------HHHHHHHHHHCC
Confidence                    12348889999999875543211245666665 33332        455555555554

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=99.81  E-value=3.6e-18  Score=157.11  Aligned_cols=182  Identities=14%  Similarity=0.110  Sum_probs=127.5

Q ss_pred             EEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCCCcc
Q 019722           37 TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLPLN  116 (336)
Q Consensus        37 ~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id  116 (336)
                      ++|||||+|+||++++++|+++|++|++++|......+..+.+.... +.++.++.+|+++++++.++++..     ++|
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~-----~~D   75 (338)
T 1udb_A            2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLG-GKHPTFVEGDIRNEALMTEILHDH-----AID   75 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHH-TSCCEEEECCTTCHHHHHHHHHHT-----TCS
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHHHHHHhhc-CCcceEEEccCCCHHHHHHHhhcc-----CCC
Confidence            68999999999999999999999999998864321111122222211 346888999999999998887652     699


Q ss_pred             EEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcccccccccCC
Q 019722          117 LLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRN  196 (336)
Q Consensus       117 ~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~~~~~~  196 (336)
                      +||||||.....  ...++.++.+++|+.++..+++++.    +.+     .+++|++||... ++......+++    +
T Consensus        76 ~vih~A~~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~----~~~-----~~~iv~~SS~~~-~g~~~~~~~~e----~  139 (338)
T 1udb_A           76 TVIHFAGLKAVG--ESVQKPLEYYDNNVNGTLRLISAMR----AAN-----VKNFIFSSSATV-YGDNPKIPYVE----S  139 (338)
T ss_dssp             EEEECCSCCCHH--HHHHCHHHHHHHHHHHHHHHHHHHH----HHT-----CCEEEEEEEGGG-GCSCCSSSBCT----T
T ss_pred             EEEECCccCccc--cchhcHHHHHHHHHHHHHHHHHHHH----hcC-----CCeEEEEccHHH-hCCCCCCCcCc----c
Confidence            999999965321  1234567789999999999988643    322     369999999643 32211111111    1


Q ss_pred             CCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCC
Q 019722          197 KSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTR  244 (336)
Q Consensus       197 ~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~  244 (336)
                      ....+....|+.||++.+.+++.++.+.  .+  +++..+.|+.+..+
T Consensus       140 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~--~~~~ilR~~~v~G~  183 (338)
T 1udb_A          140 FPTGTPQSPYGKSKLMVEQILTDLQKAQ--PD--WSIALLRYFNPVGA  183 (338)
T ss_dssp             SCCCCCSSHHHHHHHHHHHHHHHHHHHS--TT--CEEEEEEECEEECC
T ss_pred             cCCCCCCChHHHHHHHHHHHHHHHHHhc--CC--CceEEEeeceecCC
Confidence            1111235689999999999999999874  24  89999998877654

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=99.80  E-value=2.7e-18  Score=172.04  Aligned_cols=252  Identities=12%  Similarity=0.018  Sum_probs=169.2

Q ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHC-CCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHH-HHHHHHHHH
Q 019722           32 NLSSVTAIITGATSGIGAETARVLAKR-GARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSS-VRNFVSQFH  109 (336)
Q Consensus        32 ~l~gk~~lItGgs~gIG~aia~~L~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~-v~~~~~~~~  109 (336)
                      .++++++|||||+|+||++++++|+++ |++|++++|+.......    .   ...++.++.+|+++.++ +..+++   
T Consensus       312 ~~~~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~~~~----~---~~~~v~~v~~Dl~d~~~~~~~~~~---  381 (660)
T 1z7e_A          312 ARRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRF----L---NHPHFHFVEGDISIHSEWIEYHVK---  381 (660)
T ss_dssp             --CCEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEESCCTTTGGG----T---TCTTEEEEECCTTTCHHHHHHHHH---
T ss_pred             hccCceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcCchhhhhh----c---cCCceEEEECCCCCcHHHHHHhhc---
Confidence            357899999999999999999999998 89999999987643221    1   13578999999998765 555554   


Q ss_pred             hcCCCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcccc
Q 019722          110 SLNLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRY  189 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~  189 (336)
                          ++|+||||||.....  ...+++++.+++|+.++..+++++...          ++++|++||... ++......+
T Consensus       382 ----~~D~Vih~Aa~~~~~--~~~~~~~~~~~~Nv~gt~~ll~aa~~~----------~~r~V~~SS~~v-yg~~~~~~~  444 (660)
T 1z7e_A          382 ----KCDVVLPLVAIATPI--EYTRNPLRVFELDFEENLRIIRYCVKY----------RKRIIFPSTSEV-YGMCSDKYF  444 (660)
T ss_dssp             ----HCSEEEECCCCCCTH--HHHHSHHHHHHHHTHHHHHHHHHHHHT----------TCEEEEECCGGG-GBTCCSSSB
T ss_pred             ----CCCEEEECceecCcc--ccccCHHHHHHhhhHHHHHHHHHHHHh----------CCEEEEEecHHH-cCCCCCccc
Confidence                589999999975432  123466789999999999988887642          259999999644 322111111


Q ss_pred             cccccC--CCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCcc-------chhHHHHHHHH
Q 019722          190 LGQISR--NKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRER-------EGFITDLVFFL  260 (336)
Q Consensus       190 ~~~~~~--~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~-------~~~~~~~~~~~  260 (336)
                      ++....  ..........|+.+|.+.+.+++.++.+.   |  ++++.|+||.+.++.....       ......+....
T Consensus       445 ~E~~~~~~~~p~~~p~~~Y~~sK~~~E~~~~~~~~~~---g--i~~~ilRpg~v~Gp~~~~~~~~~~~~~~~~~~~~~~~  519 (660)
T 1z7e_A          445 DEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKE---G--LQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNL  519 (660)
T ss_dssp             CTTTCCEEECCTTCTTHHHHHHHHHHHHHHHHHHHHH---C--CCEEEEEECSEESTTSSCHHHHTTTCSCHHHHHHHHH
T ss_pred             CCCccccccCcccCCCCCcHHHHHHHHHHHHHHHHHc---C--CCEEEECCCcccCCCccccccccccccchHHHHHHHH
Confidence            110000  00001334579999999999999998765   4  9999999999998875421       11222232222


Q ss_pred             HHhh-------------cCChHHHHHHHHHHHhcCccccCCceeeccCccc-ccccCCCCHHHHHHHHHHHHHhhccC
Q 019722          261 TSKL-------------LKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEA-WTSKLGSNSNEASRLWAASELLVSRD  324 (336)
Q Consensus       261 ~~~~-------------~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~-~~~~~~~~~~~~~~~w~~~~~~~~~~  324 (336)
                      ....             ...++|+|.+++.++..+. ....|+.|+.+++. ..+-        .++.+.+.+.++..
T Consensus       520 ~~g~~~~~~g~g~~~~~~i~v~Dva~ai~~~l~~~~-~~~~g~~~ni~~~~~~~s~--------~el~~~i~~~~g~~  588 (660)
T 1z7e_A          520 VEGSPIKLIDGGKQKRCFTDIRDGIEALYRIIENAG-NRCDGEIINIGNPENEASI--------EELGEMLLASFEKH  588 (660)
T ss_dssp             HHTCCEEEEGGGCCEEECEEHHHHHHHHHHHHHCGG-GTTTTEEEEECCGGGEEEH--------HHHHHHHHHHHHHC
T ss_pred             HcCCCcEEeCCCCeEEEEEEHHHHHHHHHHHHhCcc-ccCCCeEEEECCCCCCcCH--------HHHHHHHHHHhcCC
Confidence            2110             1236889999999987442 33568888877764 4443        56666666666654

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=99.79  E-value=2.3e-18  Score=156.91  Aligned_cols=220  Identities=12%  Similarity=0.135  Sum_probs=150.0

Q ss_pred             EEEEeCCCChHHHHHHHHHHHC--CCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCCC
Q 019722           37 TAIITGATSGIGAETARVLAKR--GARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLP  114 (336)
Q Consensus        37 ~~lItGgs~gIG~aia~~L~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  114 (336)
                      ++|||||+|+||++++++|+++  |++|++++|+....             .++.++.+|++|++++.+++++.     +
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~-------------~~~~~~~~D~~d~~~~~~~~~~~-----~   62 (317)
T 3ajr_A            1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDT-------------GGIKFITLDVSNRDEIDRAVEKY-----S   62 (317)
T ss_dssp             CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCC-------------TTCCEEECCTTCHHHHHHHHHHT-----T
T ss_pred             CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCccc-------------cCceEEEecCCCHHHHHHHHhhc-----C
Confidence            4899999999999999999999  88999999875421             14567899999999998888742     6


Q ss_pred             ccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccccccccc
Q 019722          115 LNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQIS  194 (336)
Q Consensus       115 id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~~~~  194 (336)
                      +|+|||+|+....   ...+++++.+++|+.++..+++++.+.    +     .+++|++||..........     ...
T Consensus        63 ~d~vih~a~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~~~~----~-----~~~~v~~SS~~~~~~~~~~-----~~~  125 (317)
T 3ajr_A           63 IDAIFHLAGILSA---KGEKDPALAYKVNMNGTYNILEAAKQH----R-----VEKVVIPSTIGVFGPETPK-----NKV  125 (317)
T ss_dssp             CCEEEECCCCCHH---HHHHCHHHHHHHHHHHHHHHHHHHHHT----T-----CCEEEEEEEGGGCCTTSCS-----SSB
T ss_pred             CcEEEECCcccCC---ccccChHHHhhhhhHHHHHHHHHHHHc----C-----CCEEEEecCHHHhCCCCCC-----CCc
Confidence            9999999997432   123567889999999999999987642    2     3699999997543321110     011


Q ss_pred             CCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCcc---ch-hHHHHHHHHHHhh------
Q 019722          195 RNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRER---EG-FITDLVFFLTSKL------  264 (336)
Q Consensus       195 ~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~---~~-~~~~~~~~~~~~~------  264 (336)
                      ++.....+...|+.+|++.+.+++.++.+.   +  ++++.+.|+.+..+.....   .. ....+...+....      
T Consensus       126 ~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~---~--~~~~~lR~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  200 (317)
T 3ajr_A          126 PSITITRPRTMFGVTKIAAELLGQYYYEKF---G--LDVRSLRYPGIISYKAEPTAGTTDYAVEIFYYAVKREKYKCYLA  200 (317)
T ss_dssp             CSSSCCCCCSHHHHHHHHHHHHHHHHHHHH---C--CEEEEEEECEEECSSSCCCSCSSTHHHHHHHHHHTTCCEEECSC
T ss_pred             cccccCCCCchHHHHHHHHHHHHHHHHHhc---C--CeEEEEecCcEeccCCCCCCcchhHHHHHHHHHHhCCCceeecC
Confidence            111123345689999999999999888664   4  9999998777765432110   11 1111111111110      


Q ss_pred             ------cCChHHHHHHHHHHHhcCccccCCceeeccCc
Q 019722          265 ------LKTIPQGAATTCYVAIHPRLVNVSGKYFADCN  296 (336)
Q Consensus       265 ------~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~  296 (336)
                            ....+|.+.+++.++..+.....+|..|+..+
T Consensus       201 ~~~~~~~i~v~Dva~a~~~~l~~~~~~~~~g~~~~i~~  238 (317)
T 3ajr_A          201 PNRALPMMYMPDALKALVDLYEADRDKLVLRNGYNVTA  238 (317)
T ss_dssp             TTCCEEEEEHHHHHHHHHHHHHCCGGGCSSCSCEECCS
T ss_pred             ccceeeeeEHHHHHHHHHHHHhCCccccccCceEecCC
Confidence                  11358889999988876654444566666665

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=99.79  E-value=1.2e-18  Score=150.80  Aligned_cols=217  Identities=11%  Similarity=-0.050  Sum_probs=138.8

Q ss_pred             EEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCCCcc
Q 019722           37 TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLPLN  116 (336)
Q Consensus        37 ~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id  116 (336)
                      ++|||||+|+||++++++|+++|++|++++|++++.....        ..++.++++|++|+++  ..       +.++|
T Consensus         2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~--------~~~~~~~~~D~~d~~~--~~-------~~~~d   64 (224)
T 3h2s_A            2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRL--------GATVATLVKEPLVLTE--AD-------LDSVD   64 (224)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHT--------CTTSEEEECCGGGCCH--HH-------HTTCS
T ss_pred             EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEeccccccccc--------CCCceEEecccccccH--hh-------cccCC
Confidence            4999999999999999999999999999999987765331        3578999999999887  22       23789


Q ss_pred             EEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcccccccccCC
Q 019722          117 LLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRN  196 (336)
Q Consensus       117 ~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~~~~~~  196 (336)
                      +||||||.....         ....+|+.+...++    +.+++.      ++++|++||.++.........  ... +.
T Consensus        65 ~vi~~ag~~~~~---------~~~~~n~~~~~~l~----~a~~~~------~~~~v~~SS~~~~~~~~~~~~--~~~-~~  122 (224)
T 3h2s_A           65 AVVDALSVPWGS---------GRGYLHLDFATHLV----SLLRNS------DTLAVFILGSASLAMPGADHP--MIL-DF  122 (224)
T ss_dssp             EEEECCCCCTTS---------SCTHHHHHHHHHHH----HTCTTC------CCEEEEECCGGGSBCTTCSSC--GGG-GC
T ss_pred             EEEECCccCCCc---------chhhHHHHHHHHHH----HHHHHc------CCcEEEEecceeeccCCCCcc--ccc-cC
Confidence            999999976211         11345666654444    444332      279999999866554221100  000 01


Q ss_pred             CCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchh-HHHHHHHHHHhhcCChHHHHHHH
Q 019722          197 KSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGF-ITDLVFFLTSKLLKTIPQGAATT  275 (336)
Q Consensus       197 ~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~-~~~~~~~~~~~~~~~~~~~a~~~  275 (336)
                      .........|+.+|++.+.+ +.+   ....+  ++++.|+||.+.++........ .......-.......++|+|.++
T Consensus       123 ~~~~~~~~~y~~sK~~~e~~-~~~---~~~~~--i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~~  196 (224)
T 3h2s_A          123 PESAASQPWYDGALYQYYEY-QFL---QMNAN--VNWIGISPSEAFPSGPATSYVAGKDTLLVGEDGQSHITTGNMALAI  196 (224)
T ss_dssp             CGGGGGSTTHHHHHHHHHHH-HHH---TTCTT--SCEEEEEECSBCCCCCCCCEEEESSBCCCCTTSCCBCCHHHHHHHH
T ss_pred             CCCCccchhhHHHHHHHHHH-HHH---HhcCC--CcEEEEcCccccCCCcccCceecccccccCCCCCceEeHHHHHHHH
Confidence            10011255799999998854 222   23445  9999999999997732211000 00000000112346789999999


Q ss_pred             HHHHhcCccccCCceeeccCcccccc
Q 019722          276 CYVAIHPRLVNVSGKYFADCNEAWTS  301 (336)
Q Consensus       276 ~~l~~~~~~~~~~G~~~~~~~~~~~~  301 (336)
                      +.++..+..   .|+.|...+....+
T Consensus       197 ~~~l~~~~~---~g~~~~~~~~~~~~  219 (224)
T 3h2s_A          197 LDQLEHPTA---IRDRIVVRDADLEH  219 (224)
T ss_dssp             HHHHHSCCC---TTSEEEEEECC---
T ss_pred             HHHhcCccc---cCCEEEEecCcchh
Confidence            999986653   58888777765443

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.79  E-value=6.7e-20  Score=157.62  Aligned_cols=187  Identities=13%  Similarity=0.039  Sum_probs=136.9

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC--EEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhc
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGA--RLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSL  111 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~--~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  111 (336)
                      .+++++||||+|+||++++++|+++|+  +|++++|++.+          .  ..++.++.+|+++++++.+++      
T Consensus         4 ~~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~----------~--~~~~~~~~~D~~~~~~~~~~~------   65 (215)
T 2a35_A            4 TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA----------E--HPRLDNPVGPLAELLPQLDGS------   65 (215)
T ss_dssp             CCCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC----------C--CTTEECCBSCHHHHGGGCCSC------
T ss_pred             CCceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcc----------c--CCCceEEeccccCHHHHHHhh------
Confidence            468999999999999999999999998  99999998764          1  347888999998876654433      


Q ss_pred             CCCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcccccc
Q 019722          112 NLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLG  191 (336)
Q Consensus       112 ~~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~  191 (336)
                         +|++|||||....    +.+++++.+++|+.+...+++++.+.    +     .+++|++||.....          
T Consensus        66 ---~d~vi~~a~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~----~-----~~~~v~~Ss~~~~~----------  119 (215)
T 2a35_A           66 ---IDTAFCCLGTTIK----EAGSEEAFRAVDFDLPLAVGKRALEM----G-----ARHYLVVSALGADA----------  119 (215)
T ss_dssp             ---CSEEEECCCCCHH----HHSSHHHHHHHHTHHHHHHHHHHHHT----T-----CCEEEEECCTTCCT----------
T ss_pred             ---hcEEEECeeeccc----cCCCHHHHHHhhHHHHHHHHHHHHHc----C-----CCEEEEECCcccCC----------
Confidence               8999999996432    24567889999999999999887542    2     36899999976432          


Q ss_pred             cccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEE-EEEeeCCceeCCCCCcc-chhHH-HHHHHH-HHhhcCC
Q 019722          192 QISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVT-VNCVHPGIVRTRLTRER-EGFIT-DLVFFL-TSKLLKT  267 (336)
Q Consensus       192 ~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~-vn~v~PG~v~T~~~~~~-~~~~~-~~~~~~-~~~~~~~  267 (336)
                               ++...|+.+|++++.+++.+       +  ++ ++.|+||.+.++..... ..... ...... .......
T Consensus       120 ---------~~~~~y~~sK~~~e~~~~~~-------~--~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~i~  181 (215)
T 2a35_A          120 ---------KSSIFYNRVKGELEQALQEQ-------G--WPQLTIARPSLLFGPREEFRLAEILAAPIARILPGKYHGIE  181 (215)
T ss_dssp             ---------TCSSHHHHHHHHHHHHHTTS-------C--CSEEEEEECCSEESTTSCEEGGGGTTCCCC----CHHHHHH
T ss_pred             ---------CCccHHHHHHHHHHHHHHHc-------C--CCeEEEEeCceeeCCCCcchHHHHHHHhhhhccCCCcCcEe
Confidence                     12347999999999887752       4  88 99999999998864311 00000 000000 0122346


Q ss_pred             hHHHHHHHHHHHhcC
Q 019722          268 IPQGAATTCYVAIHP  282 (336)
Q Consensus       268 ~~~~a~~~~~l~~~~  282 (336)
                      ++|+|..++.++..+
T Consensus       182 ~~Dva~~~~~~~~~~  196 (215)
T 2a35_A          182 ACDLARALWRLALEE  196 (215)
T ss_dssp             HHHHHHHHHHHHTCC
T ss_pred             HHHHHHHHHHHHhcC
Confidence            789999999999755

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=99.78  E-value=6.2e-18  Score=170.49  Aligned_cols=270  Identities=14%  Similarity=0.030  Sum_probs=167.5

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      ++++++|++|||||+|+||++++++|+++|++|++++|+.....+..+++.... +.++.++.+|+++++++.++++.. 
T Consensus         6 ~~~~~~~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~v~~v~~Dl~d~~~l~~~~~~~-   83 (699)
T 1z45_A            6 QSESTSKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLT-KHHIPFYEVDLCDRKGLEKVFKEY-   83 (699)
T ss_dssp             -----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHH-TSCCCEEECCTTCHHHHHHHHHHS-
T ss_pred             ccccCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCcchHHHHHHHhhcc-CCceEEEEcCCCCHHHHHHHHHhC-
Confidence            356789999999999999999999999999999999987543222222222111 357888999999999998888753 


Q ss_pred             hcCCCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcccc
Q 019722          110 SLNLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRY  189 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~  189 (336)
                          ++|+||||||.....  ...+..++.+++|+.++..+++++..    .+     .+++|++||.+. ++...... 
T Consensus        84 ----~~D~Vih~A~~~~~~--~~~~~~~~~~~~Nv~gt~~ll~a~~~----~~-----~~~iV~~SS~~v-yg~~~~~~-  146 (699)
T 1z45_A           84 ----KIDSVIHFAGLKAVG--ESTQIPLRYYHNNILGTVVLLELMQQ----YN-----VSKFVFSSSATV-YGDATRFP-  146 (699)
T ss_dssp             ----CCCEEEECCSCCCHH--HHHHSHHHHHHHHHHHHHHHHHHHHH----HT-----CCEEEEEEEGGG-GCCGGGST-
T ss_pred             ----CCCEEEECCcccCcC--ccccCHHHHHHHHHHHHHHHHHHHHH----cC-----CCEEEEECcHHH-hCCCcccc-
Confidence                699999999975321  11234467899999999998876543    22     369999999643 22110000 


Q ss_pred             cccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCc---------cchhHHHHHHHH
Q 019722          190 LGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRE---------REGFITDLVFFL  260 (336)
Q Consensus       190 ~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~---------~~~~~~~~~~~~  260 (336)
                      ......+.....+...|+.+|++++.+++.++.+. ..+  +++..++|+.+..+....         ............
T Consensus       147 ~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-~~g--~~~~ilR~~~vyG~~~~~~~g~~~~~~~~~~~~~~~~~~  223 (699)
T 1z45_A          147 NMIPIPEECPLGPTNPYGHTKYAIENILNDLYNSD-KKS--WKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVA  223 (699)
T ss_dssp             TCCSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHS-TTS--CEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHH
T ss_pred             ccCCccccCCCCCCChHHHHHHHHHHHHHHHHHhc-cCC--CcEEEEEeccccCCCcccccccccccchhHHHHHHHHHH
Confidence            00011111123345689999999999999998774 234  999999999987653211         011222222111


Q ss_pred             HH---h-----------------hcCChHHHHHHHHHHHhcCcc---ccCCceeeccCcccccccCCCCHHHHHHHHHHH
Q 019722          261 TS---K-----------------LLKTIPQGAATTCYVAIHPRL---VNVSGKYFADCNEAWTSKLGSNSNEASRLWAAS  317 (336)
Q Consensus       261 ~~---~-----------------~~~~~~~~a~~~~~l~~~~~~---~~~~G~~~~~~~~~~~~~~~~~~~~~~~~w~~~  317 (336)
                      ..   .                 .....+|+|.+++.++..+..   ..-.|+.|+..+....+-        .++.+.+
T Consensus       224 ~~~~~~~~~~g~~~~~~~g~~~~~~i~v~Dva~a~~~a~~~~~~~~~~~~~~~~yni~~~~~~s~--------~el~~~i  295 (699)
T 1z45_A          224 VGRREKLYIFGDDYDSRDGTPIRDYIHVVDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGSTV--------FEVYHAF  295 (699)
T ss_dssp             TTSSSCCCCC------CCSSCEECEEEHHHHHHHHHHHHHHHHHSCTTCCEEEEEEESCSCCEEH--------HHHHHHH
T ss_pred             hcCCCceEEeCCcccCCCCCeeEeeEEHHHHHHHHHHHHhhhhccccccCCceEEEECCCCCCcH--------HHHHHHH
Confidence            10   0                 012357888888887753211   011245666665544442        6667777


Q ss_pred             HHhhccCCCCCC
Q 019722          318 ELLVSRDPKSVF  329 (336)
Q Consensus       318 ~~~~~~~~~~~~  329 (336)
                      .+.++...+..+
T Consensus       296 ~~~~g~~~~~~~  307 (699)
T 1z45_A          296 CKASGIDLPYKV  307 (699)
T ss_dssp             HHHHTCCCCC--
T ss_pred             HHHhCCCCCcee
Confidence            777776654433

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=99.78  E-value=1.4e-18  Score=149.79  Aligned_cols=214  Identities=15%  Similarity=0.127  Sum_probs=130.3

Q ss_pred             EEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCCCcc
Q 019722           37 TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLPLN  116 (336)
Q Consensus        37 ~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id  116 (336)
                      ++|||||+|+||++++++|+++|++|++++|++++.....         .++.++++|++|+++  +.       +.++|
T Consensus         2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~---------~~~~~~~~D~~d~~~--~~-------~~~~d   63 (221)
T 3ew7_A            2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTH---------KDINILQKDIFDLTL--SD-------LSDQN   63 (221)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHC---------SSSEEEECCGGGCCH--HH-------HTTCS
T ss_pred             eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhcc---------CCCeEEeccccChhh--hh-------hcCCC
Confidence            5899999999999999999999999999999987654321         468899999999887  22       23789


Q ss_pred             EEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcccccccccCC
Q 019722          117 LLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRN  196 (336)
Q Consensus       117 ~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~~~~~~  196 (336)
                      +||||||.....           ..+|+.+    ++.+++.+++.+     .+++|++||..+.++.+.....     ..
T Consensus        64 ~vi~~ag~~~~~-----------~~~~~~~----~~~l~~a~~~~~-----~~~~v~~SS~~~~~~~~~~~~~-----~~  118 (221)
T 3ew7_A           64 VVVDAYGISPDE-----------AEKHVTS----LDHLISVLNGTV-----SPRLLVVGGAASLQIDEDGNTL-----LE  118 (221)
T ss_dssp             EEEECCCSSTTT-----------TTSHHHH----HHHHHHHHCSCC-----SSEEEEECCCC------------------
T ss_pred             EEEECCcCCccc-----------cchHHHH----HHHHHHHHHhcC-----CceEEEEecceEEEcCCCCccc-----cc
Confidence            999999973221           2234444    455555555443     4799999998776543221000     00


Q ss_pred             CCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhH--HH-HHHHHHHhhcCChHHHHH
Q 019722          197 KSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFI--TD-LVFFLTSKLLKTIPQGAA  273 (336)
Q Consensus       197 ~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~a~  273 (336)
                      .........|+.+|.+.+.+. .+..  ...+  ++++.|+||.+.++.... ..+.  .. ...........+++|+|.
T Consensus       119 ~~~~~~~~~y~~~k~~~e~~~-~~~~--~~~g--i~~~ivrp~~v~g~~~~~-~~~~~~~~~~~~~~~~~~~i~~~Dva~  192 (221)
T 3ew7_A          119 SKGLREAPYYPTARAQAKQLE-HLKS--HQAE--FSWTYISPSAMFEPGERT-GDYQIGKDHLLFGSDGNSFISMEDYAI  192 (221)
T ss_dssp             ------CCCSCCHHHHHHHHH-HHHT--TTTT--SCEEEEECSSCCCCC----------------------CCCHHHHHH
T ss_pred             cCCCCCHHHHHHHHHHHHHHH-HHHh--hccC--ccEEEEeCcceecCCCcc-CceEeccccceecCCCCceEeHHHHHH
Confidence            111122345999999998862 2221  1344  999999999998872111 1010  00 000011123567899999


Q ss_pred             HHHHHHhcCccccCCceeeccCccccccc
Q 019722          274 TTCYVAIHPRLVNVSGKYFADCNEAWTSK  302 (336)
Q Consensus       274 ~~~~l~~~~~~~~~~G~~~~~~~~~~~~~  302 (336)
                      +++.++..+..   .|+.|+..+....++
T Consensus       193 ~~~~~l~~~~~---~g~~~~~~~~~~~~~  218 (221)
T 3ew7_A          193 AVLDEIERPNH---LNEHFTVAGKLEHHH  218 (221)
T ss_dssp             HHHHHHHSCSC---TTSEEECCC------
T ss_pred             HHHHHHhCccc---cCCEEEECCCCcccc
Confidence            99999986653   688888888766553

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=99.78  E-value=4.4e-19  Score=161.63  Aligned_cols=245  Identities=16%  Similarity=0.013  Sum_probs=159.2

Q ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhc
Q 019722           32 NLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSL  111 (336)
Q Consensus        32 ~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  111 (336)
                      ++.++++|||||+|+||++++++|+++|++|++++|+..........+.......++.++.+|++               
T Consensus         4 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~---------------   68 (321)
T 3vps_A            4 NTLKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTGKFLEKPVLELEERDLS---------------   68 (321)
T ss_dssp             ---CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSSCCSSCCTTSSEEECSCGGGCCHHHHT---------------
T ss_pred             ccCCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcccccchhhhhhhccCCCeeEEeCccc---------------
Confidence            46689999999999999999999999999999999986521000011111111234566666665               


Q ss_pred             CCCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcccccc
Q 019722          112 NLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLG  191 (336)
Q Consensus       112 ~~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~  191 (336)
                        ++|+|||+|+.....  ...+.....++ |+.++..+++++...-         .+++|++||.... +......+  
T Consensus        69 --~~d~vi~~a~~~~~~--~~~~~~~~~~~-n~~~~~~ll~a~~~~~---------v~~~v~~SS~~v~-~~~~~~~~--  131 (321)
T 3vps_A           69 --DVRLVYHLASHKSVP--RSFKQPLDYLD-NVDSGRHLLALCTSVG---------VPKVVVGSTCEVY-GQADTLPT--  131 (321)
T ss_dssp             --TEEEEEECCCCCCHH--HHTTSTTTTHH-HHHHHHHHHHHHHHHT---------CCEEEEEEEGGGG-CSCSSSSB--
T ss_pred             --cCCEEEECCccCChH--HHHhCHHHHHH-HHHHHHHHHHHHHHcC---------CCeEEEecCHHHh-CCCCCCCC--
Confidence              689999999976432  11233345666 9999999888875532         2699999996533 22111111  


Q ss_pred             cccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcE-EEEEeeCCceeCCCCCccchhHHHHHHHHHHhh------
Q 019722          192 QISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANV-TVNCVHPGIVRTRLTREREGFITDLVFFLTSKL------  264 (336)
Q Consensus       192 ~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I-~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~------  264 (336)
                         .+.....+...|+.+|++.+.+++.++.+.   +  + +++.++|+.+.++.... ......+........      
T Consensus       132 ---~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~--~~~~~ilRp~~v~G~~~~~-~~~~~~~~~~~~~~~~~~~~~  202 (321)
T 3vps_A          132 ---PEDSPLSPRSPYAASKVGLEMVAGAHQRAS---V--APEVGIVRFFNVYGPGERP-DALVPRLCANLLTRNELPVEG  202 (321)
T ss_dssp             ---CTTSCCCCCSHHHHHHHHHHHHHHHHHHSS---S--SCEEEEEEECEEECTTCCT-TSHHHHHHHHHHHHSEEEEET
T ss_pred             ---CCCCCCCCCChhHHHHHHHHHHHHHHHHHc---C--CCceEEEEeccccCcCCCC-CChHHHHHHHHHcCCCeEEeC
Confidence               122223445689999999999999988753   3  8 99999999999887554 122333333222211      


Q ss_pred             -------cCChHHHHHHHHHHHhcCccccCCceeeccCcccccccCCCCHHHHHHHHHHHHHhhccCCCCCCCC
Q 019722          265 -------LKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWTSKLGSNSNEASRLWAASELLVSRDPKSVFDP  331 (336)
Q Consensus       265 -------~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~p  331 (336)
                             ...++|+|.+++.++..+.    .| .|+..++...+-        .++.+.+. .++...+..+.|
T Consensus       203 ~~~~~~~~v~v~Dva~~~~~~~~~~~----~g-~~~i~~~~~~s~--------~e~~~~i~-~~g~~~~~~~~~  262 (321)
T 3vps_A          203 DGEQRRDFTYITDVVDKLVALANRPL----PS-VVNFGSGQSLSV--------NDVIRILQ-ATSPAAEVARKQ  262 (321)
T ss_dssp             TSCCEECEEEHHHHHHHHHHGGGSCC----CS-EEEESCSCCEEH--------HHHHHHHH-TTCTTCEEEEEC
T ss_pred             CCCceEceEEHHHHHHHHHHHHhcCC----CC-eEEecCCCcccH--------HHHHHHHH-HhCCCCccccCC
Confidence                   1256889999999998553    37 776776655553        77777777 777765544333

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=99.78  E-value=2.6e-18  Score=154.43  Aligned_cols=218  Identities=14%  Similarity=0.115  Sum_probs=155.1

Q ss_pred             EEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCCCcc
Q 019722           37 TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLPLN  116 (336)
Q Consensus        37 ~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id  116 (336)
                      ++|||||+|+||++++++|+++|++|++++|.                       ++|+++.+++.++++..     ++|
T Consensus         7 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~-----------------------~~D~~d~~~~~~~~~~~-----~~d   58 (287)
T 3sc6_A            7 RVIITGANGQLGKQLQEELNPEEYDIYPFDKK-----------------------LLDITNISQVQQVVQEI-----RPH   58 (287)
T ss_dssp             EEEEESTTSHHHHHHHHHSCTTTEEEEEECTT-----------------------TSCTTCHHHHHHHHHHH-----CCS
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEeccc-----------------------ccCCCCHHHHHHHHHhc-----CCC
Confidence            89999999999999999999999999999992                       37999999999988865     689


Q ss_pred             EEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcccccccccCC
Q 019722          117 LLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRN  196 (336)
Q Consensus       117 ~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~~~~~~  196 (336)
                      +|||+||.....  ...+++++.+++|+.++..+++++...          +.++|++||.... +.....++     .+
T Consensus        59 ~vi~~a~~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~----------~~~~v~~SS~~vy-~~~~~~~~-----~E  120 (287)
T 3sc6_A           59 IIIHCAAYTKVD--QAEKERDLAYVINAIGARNVAVASQLV----------GAKLVYISTDYVF-QGDRPEGY-----DE  120 (287)
T ss_dssp             EEEECCCCCCHH--HHTTCHHHHHHHHTHHHHHHHHHHHHH----------TCEEEEEEEGGGS-CCCCSSCB-----CT
T ss_pred             EEEECCcccChH--HHhcCHHHHHHHHHHHHHHHHHHHHHc----------CCeEEEEchhhhc-CCCCCCCC-----CC
Confidence            999999976432  223577889999999999999988543          2589999997533 21111111     12


Q ss_pred             CCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHHHHHHHHh----hcC------
Q 019722          197 KSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSK----LLK------  266 (336)
Q Consensus       197 ~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~----~~~------  266 (336)
                      .....+...|+.+|.+.+.+++.++.         +++.++|+.+.++....   ............    ...      
T Consensus       121 ~~~~~p~~~Y~~sK~~~E~~~~~~~~---------~~~ilR~~~v~G~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~  188 (287)
T 3sc6_A          121 FHNPAPINIYGASKYAGEQFVKELHN---------KYFIVRTSWLYGKYGNN---FVKTMIRLGKEREEISVVADQIGSP  188 (287)
T ss_dssp             TSCCCCCSHHHHHHHHHHHHHHHHCS---------SEEEEEECSEECSSSCC---HHHHHHHHHTTCSEEEEECSCEECC
T ss_pred             CCCCCCCCHHHHHHHHHHHHHHHhCC---------CcEEEeeeeecCCCCCc---HHHHHHHHHHcCCCeEeecCcccCc
Confidence            22234456899999999999887643         35789999999876443   222222222111    111      


Q ss_pred             -ChHHHHHHHHHHHhcCccccCCceeeccCcccccccCCCCHHHHHHHHHHHHHhhccCC
Q 019722          267 -TIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWTSKLGSNSNEASRLWAASELLVSRDP  325 (336)
Q Consensus       267 -~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~  325 (336)
                       .++|+|.++++++..+.     +..|+..+....+-        .++.+.+.+.++..+
T Consensus       189 i~v~Dva~~~~~~~~~~~-----~~~~~i~~~~~~s~--------~e~~~~i~~~~g~~~  235 (287)
T 3sc6_A          189 TYVADLNVMINKLIHTSL-----YGTYHVSNTGSCSW--------FEFAKKIFSYANMKV  235 (287)
T ss_dssp             EEHHHHHHHHHHHHTSCC-----CEEEECCCBSCEEH--------HHHHHHHHHHHTCCC
T ss_pred             eEHHHHHHHHHHHHhCCC-----CCeEEEcCCCcccH--------HHHHHHHHHHcCCCc
Confidence             27899999999987543     44566666554543        667777777777653

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=99.77  E-value=1.2e-18  Score=158.17  Aligned_cols=224  Identities=11%  Similarity=0.020  Sum_probs=149.3

Q ss_pred             EEEEeCCCChHHHHHHHHHHHCC-CEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCCCc
Q 019722           37 TAIITGATSGIGAETARVLAKRG-ARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLPL  115 (336)
Q Consensus        37 ~~lItGgs~gIG~aia~~L~~~G-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i  115 (336)
                      ++|||||+|+||++++++|+++| ++|++++|+.....  ...+.    +  +. +.+|+++.+.+..+++..  .++++
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~--~~~~~----~--~~-~~~d~~~~~~~~~~~~~~--~~~~~   69 (310)
T 1eq2_A            1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK--FVNLV----D--LN-IADYMDKEDFLIQIMAGE--EFGDV   69 (310)
T ss_dssp             CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGG--GHHHH----T--SC-CSEEEEHHHHHHHHHTTC--CCSSC
T ss_pred             CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCCCch--hhhcC----c--ce-eccccccHHHHHHHHhcc--ccCCC
Confidence            48999999999999999999999 89999998765321  11121    1  12 678999888877766421  12369


Q ss_pred             cEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcccccccccC
Q 019722          116 NLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISR  195 (336)
Q Consensus       116 d~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~~~~~  195 (336)
                      |+|||+||....    ..+++++.+++|+.++..+++++...    +     . ++|++||... ++......+++    
T Consensus        70 d~vi~~a~~~~~----~~~~~~~~~~~n~~~~~~l~~a~~~~----~-----~-~~v~~SS~~v-~g~~~~~~~~E----  130 (310)
T 1eq2_A           70 EAIFHEGACSST----TEWDGKYMMDNNYQYSKELLHYCLER----E-----I-PFLYASSAAT-YGGRTSDFIES----  130 (310)
T ss_dssp             CEEEECCSCCCT----TCCCHHHHHHHTHHHHHHHHHHHHHH----T-----C-CEEEEEEGGG-GTTCCSCBCSS----
T ss_pred             cEEEECcccccC----cccCHHHHHHHHHHHHHHHHHHHHHc----C-----C-eEEEEeeHHH-hCCCCCCCCCC----
Confidence            999999997543    34567889999999999999988653    1     3 8999999753 33211111111    


Q ss_pred             CCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCcc---chhHHHHHHHH--------H-H-
Q 019722          196 NKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRER---EGFITDLVFFL--------T-S-  262 (336)
Q Consensus       196 ~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~---~~~~~~~~~~~--------~-~-  262 (336)
                       .....+...|+.+|.+.+.+++.++.+   .|  ++++.|+||.+.++.....   ......+...+        . . 
T Consensus       131 -~~~~~p~~~Y~~sK~~~e~~~~~~~~~---~g--~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  204 (310)
T 1eq2_A          131 -REYEKPLNVYGYSKFLFDEYVRQILPE---AN--SQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGS  204 (310)
T ss_dssp             -GGGCCCSSHHHHHHHHHHHHHHHHGGG---CS--SCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC----------
T ss_pred             -CCCCCCCChhHHHHHHHHHHHHHHHHH---cC--CCEEEEeCCcEECcCCCCCCccchHHHHHHHHHHcCCCcEEecCC
Confidence             111233457999999999999988754   24  9999999999998865421   11222221111        0 0 


Q ss_pred             ----hhcCChHHHHHHHHHHHhcCccccCCceeeccCcccccc
Q 019722          263 ----KLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWTS  301 (336)
Q Consensus       263 ----~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~~  301 (336)
                          .....++|+|.+++.++..+.     |..|+..+....+
T Consensus       205 ~~~~~~~i~v~Dva~~~~~~~~~~~-----~~~~~i~~~~~~s  242 (310)
T 1eq2_A          205 ENFKRDFVYVGDVADVNLWFLENGV-----SGIFNLGTGRAES  242 (310)
T ss_dssp             ---CBCEEEHHHHHHHHHHHHHHCC-----CEEEEESCSCCBC
T ss_pred             CcceEccEEHHHHHHHHHHHHhcCC-----CCeEEEeCCCccC
Confidence                112346888999999987543     5566665544333

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=99.76  E-value=9.8e-18  Score=149.34  Aligned_cols=218  Identities=16%  Similarity=0.113  Sum_probs=150.6

Q ss_pred             EEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCCCcc
Q 019722           37 TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLPLN  116 (336)
Q Consensus        37 ~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id  116 (336)
                      ++|||||+|+||++++++|+ +|++|++++|++..        .   .+     +.+|+++++++.++++.+     ++|
T Consensus         2 ~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~~--------~---~~-----~~~Dl~~~~~~~~~~~~~-----~~d   59 (273)
T 2ggs_A            2 RTLITGASGQLGIELSRLLS-ERHEVIKVYNSSEI--------Q---GG-----YKLDLTDFPRLEDFIIKK-----RPD   59 (273)
T ss_dssp             CEEEETTTSHHHHHHHHHHT-TTSCEEEEESSSCC--------T---TC-----EECCTTSHHHHHHHHHHH-----CCS
T ss_pred             EEEEECCCChhHHHHHHHHh-cCCeEEEecCCCcC--------C---CC-----ceeccCCHHHHHHHHHhc-----CCC
Confidence            58999999999999999999 58999999998641        0   12     789999999999988765     689


Q ss_pred             EEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcccccccccCC
Q 019722          117 LLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRN  196 (336)
Q Consensus       117 ~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~~~~~~  196 (336)
                      +||||||....  ..+.+++++.+++|+.++..+++++.+    .      ++++|++||.....+...  .+     .+
T Consensus        60 ~vi~~a~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~----~------~~~iv~~SS~~~~~~~~~--~~-----~e  120 (273)
T 2ggs_A           60 VIINAAAMTDV--DKCEIEKEKAYKINAEAVRHIVRAGKV----I------DSYIVHISTDYVFDGEKG--NY-----KE  120 (273)
T ss_dssp             EEEECCCCCCH--HHHHHCHHHHHHHHTHHHHHHHHHHHH----T------TCEEEEEEEGGGSCSSSC--SB-----CT
T ss_pred             EEEECCcccCh--hhhhhCHHHHHHHhHHHHHHHHHHHHH----h------CCeEEEEecceeEcCCCC--Cc-----CC
Confidence            99999997542  123467889999999999999999864    1      259999999765433211  11     11


Q ss_pred             CCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHHHHHHHH----------hhcC
Q 019722          197 KSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTS----------KLLK  266 (336)
Q Consensus       197 ~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~----------~~~~  266 (336)
                      .....+...|+.+|++++.+++.    +...  .+|++.|. |  .+++       ..........          ....
T Consensus       121 ~~~~~~~~~Y~~sK~~~e~~~~~----~~~~--~iR~~~v~-G--~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~  184 (273)
T 2ggs_A          121 EDIPNPINYYGLSKLLGETFALQ----DDSL--IIRTSGIF-R--NKGF-------PIYVYKTLKEGKTVFAFKGYYSPI  184 (273)
T ss_dssp             TSCCCCSSHHHHHHHHHHHHHCC----TTCE--EEEECCCB-S--SSSH-------HHHHHHHHHTTCCEEEESCEECCC
T ss_pred             CCCCCCCCHHHHHHHHHHHHHhC----CCeE--EEeccccc-c--ccHH-------HHHHHHHHHcCCCEEeecCCCCce
Confidence            11123356899999999999887    2222  26666655 4  2221       1111111111          1245


Q ss_pred             ChHHHHHHHHHHHhcCccccCCceeeccCcccccccCCCCHHHHHHHHHHHHHhhccCC
Q 019722          267 TIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWTSKLGSNSNEASRLWAASELLVSRDP  325 (336)
Q Consensus       267 ~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~  325 (336)
                      .++|+|.++++++..+.    +| .|+.++ ...+.        .++.+.+.+.++...
T Consensus       185 ~~~dva~~i~~~~~~~~----~g-~~~i~~-~~~s~--------~e~~~~~~~~~g~~~  229 (273)
T 2ggs_A          185 SARKLASAILELLELRK----TG-IIHVAG-ERISR--------FELALKIKEKFNLPG  229 (273)
T ss_dssp             BHHHHHHHHHHHHHHTC----CE-EEECCC-CCEEH--------HHHHHHHHHHTTCCS
T ss_pred             EHHHHHHHHHHHHhcCc----CC-eEEECC-CcccH--------HHHHHHHHHHhCCCh
Confidence            68999999999997542    55 566666 55553        667777777777654

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=99.75  E-value=3.4e-18  Score=153.52  Aligned_cols=212  Identities=13%  Similarity=0.041  Sum_probs=149.2

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHC--CCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCC
Q 019722           36 VTAIITGATSGIGAETARVLAKR--GARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNL  113 (336)
Q Consensus        36 k~~lItGgs~gIG~aia~~L~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  113 (336)
                      |++|||||+|+||++++++|+++  |++|++++|+.++...+.        ..++.++.+|++|++++.++++       
T Consensus         1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~--------~~~~~~~~~D~~d~~~l~~~~~-------   65 (287)
T 2jl1_A            1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLA--------DQGVEVRHGDYNQPESLQKAFA-------   65 (287)
T ss_dssp             CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHH--------HTTCEEEECCTTCHHHHHHHTT-------
T ss_pred             CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHh--------hcCCeEEEeccCCHHHHHHHHh-------
Confidence            46999999999999999999999  999999999876554322        1367889999999998887765       


Q ss_pred             CccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcccccccc
Q 019722          114 PLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQI  193 (336)
Q Consensus       114 ~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~~~  193 (336)
                      ++|++||+|+...       +.     ++|+.+...+++++..    .+     .+++|++||.....            
T Consensus        66 ~~d~vi~~a~~~~-------~~-----~~n~~~~~~l~~a~~~----~~-----~~~~v~~Ss~~~~~------------  112 (287)
T 2jl1_A           66 GVSKLLFISGPHY-------DN-----TLLIVQHANVVKAARD----AG-----VKHIAYTGYAFAEE------------  112 (287)
T ss_dssp             TCSEEEECCCCCS-------CH-----HHHHHHHHHHHHHHHH----TT-----CSEEEEEEETTGGG------------
T ss_pred             cCCEEEEcCCCCc-------Cc-----hHHHHHHHHHHHHHHH----cC-----CCEEEEECCCCCCC------------
Confidence            5899999999521       11     5788888888777643    22     36999999975421            


Q ss_pred             cCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHHHHHHH--------Hhhc
Q 019722          194 SRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLT--------SKLL  265 (336)
Q Consensus       194 ~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~--------~~~~  265 (336)
                            .+  ..|+.+|.+.+.+++.       .+  ++++.++||.+.++....   ........-.        ....
T Consensus       113 ------~~--~~y~~~K~~~E~~~~~-------~~--~~~~ilrp~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~  172 (287)
T 2jl1_A          113 ------SI--IPLAHVHLATEYAIRT-------TN--IPYTFLRNALYTDFFVNE---GLRASTESGAIVTNAGSGIVNS  172 (287)
T ss_dssp             ------CC--STHHHHHHHHHHHHHH-------TT--CCEEEEEECCBHHHHSSG---GGHHHHHHTEEEESCTTCCBCC
T ss_pred             ------CC--CchHHHHHHHHHHHHH-------cC--CCeEEEECCEeccccchh---hHHHHhhCCceeccCCCCccCc
Confidence                  11  2699999999988753       34  999999999987664221   1111111100        0123


Q ss_pred             CChHHHHHHHHHHHhcCccccCCceeeccCcccccccCCCCHHHHHHHHHHHHHhhccCCC
Q 019722          266 KTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWTSKLGSNSNEASRLWAASELLVSRDPK  326 (336)
Q Consensus       266 ~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~  326 (336)
                      ..++|+|.+++.++..+.   ..|+.|+.++....+-        .++.+.+.+.++....
T Consensus       173 i~~~Dva~~~~~~~~~~~---~~g~~~~i~~~~~~s~--------~e~~~~i~~~~g~~~~  222 (287)
T 2jl1_A          173 VTRNELALAAATVLTEEG---HENKTYNLVSNQPWTF--------DELAQILSEVSGKKVV  222 (287)
T ss_dssp             BCHHHHHHHHHHHHTSSS---CTTEEEEECCSSCBCH--------HHHHHHHHHHHSSCCE
T ss_pred             cCHHHHHHHHHHHhcCCC---CCCcEEEecCCCcCCH--------HHHHHHHHHHHCCcce
Confidence            467899999999987543   3688887777655543        5666666666665543

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=99.75  E-value=2.2e-17  Score=160.44  Aligned_cols=232  Identities=16%  Similarity=0.041  Sum_probs=153.9

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHH---HHHHHHHHHhh-------CCCCceEEEeccCCCHHHHHHH
Q 019722           35 SVTAIITGATSGIGAETARVLAKRGARLVLPARSLKA---AEEAKARLASD-------CPGSDIVVLPLDLSSLSSVRNF  104 (336)
Q Consensus        35 gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~---~~~~~~~l~~~-------~~~~~~~~~~~Dl~~~~~v~~~  104 (336)
                      .+++|||||+|+||.+++++|.++|++|+++.|+...   ..++.+.++..       ....++.++.+|++++.++.  
T Consensus       150 ~~~VLVTGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~--  227 (508)
T 4f6l_B          150 LGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV--  227 (508)
T ss_dssp             CEEEEESCTTSHHHHHHHHHTBTTEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSCC--
T ss_pred             CCeEEEECCccchHHHHHHHHHhcCCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccccCC--
Confidence            4799999999999999999999999999999998763   23333333221       11468999999999977776  


Q ss_pred             HHHHHhcCCCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccC
Q 019722          105 VSQFHSLNLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSG  184 (336)
Q Consensus       105 ~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~  184 (336)
                            ...++|+|||||+....     ..+++..+++|+.++..+++++..    .      ..++|++||...  +..
T Consensus       228 ------~~~~~D~Vih~Aa~~~~-----~~~~~~~~~~Nv~gt~~ll~~a~~----~------~~~~v~iSS~~v--G~~  284 (508)
T 4f6l_B          228 ------LPENMDTIIHAGARTDH-----FGDDDEFEKVNVQGTVDVIRLAQQ----H------HARLIYVSTISV--GTY  284 (508)
T ss_dssp             ------CSSCCSEEEECCCC-------------CCHHHHHHHHHHHHHHHHT----T------TCEEEEEEESCT--TSE
T ss_pred             ------CccCCCEEEECCceecC-----CCCHHHHhhhHHHHHHHHHHHHHh----C------CCcEEEeCChhh--ccC
Confidence                  34589999999997632     345678899999999999998876    1      369999999765  211


Q ss_pred             CcccccccccCCCC---CCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCcc------chhHHH
Q 019722          185 DMIRYLGQISRNKS---HYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRER------EGFITD  255 (336)
Q Consensus       185 ~~~~~~~~~~~~~~---~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~------~~~~~~  255 (336)
                      ......+.+..+..   .......|+.+|.+.+.+++.++.    .|  ++++.+.||.|.++.....      ...+..
T Consensus       285 ~~~~~~~~~~~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~g--i~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~  358 (508)
T 4f6l_B          285 FDIDTEDVTFSEADVYKGQLLTSPYTRSKFYSELKVLEAVN----NG--LDGRIVRVGNLTSPYNGRWHMRNIKTNRFSM  358 (508)
T ss_dssp             ECTTCSCCEECTTCSCSSBCCCSHHHHHHHHHHHHHHHHHH----TT--CEEEEEEECCEESCSSSCCCCTTCTTCHHHH
T ss_pred             CccCCcCcccccccccccccCCCcHHHHHHHHHHHHHHHHH----cC--CCEEEEecceeccCCCCCcccCCcchHHHHH
Confidence            00000011111111   112456799999999999988653    35  9999999999988765432      112333


Q ss_pred             HHHHHHHhh------------cCChHHHHHHHHHHHhcCccccCCceeeccCcccccc
Q 019722          256 LVFFLTSKL------------LKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWTS  301 (336)
Q Consensus       256 ~~~~~~~~~------------~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~~  301 (336)
                      .........            ...++++|.++++++..+.    .|..|...+....+
T Consensus       359 ~i~~~~~~~~~~~~~g~~~~~~v~v~DvA~ai~~~~~~~~----~~~~~nl~~~~~~s  412 (508)
T 4f6l_B          359 VMNDLLQLDCIGVSMAEMPVDFSFVDTTARQIVALAQVNT----PQIIYHVLSPNKMP  412 (508)
T ss_dssp             HHHHHTTCSEEETTGGGSEEECEEHHHHHHHHHHHTTBCC----SCSEEEESCSCEEE
T ss_pred             HHHHHHHcCCCCCCccCceEEEEcHHHHHHHHHHHHhCCC----CCCEEEeCCCCCCC
Confidence            333322111            1235888999999987554    56666666654443

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=99.73  E-value=5.6e-18  Score=152.30  Aligned_cols=235  Identities=14%  Similarity=-0.005  Sum_probs=159.1

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcC
Q 019722           33 LSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLN  112 (336)
Q Consensus        33 l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  112 (336)
                      |+++++|||| +|+||++++++|+++|++|++++|+.+..            ..++.++.+|+++.+++..+++      
T Consensus         1 M~~~~ilVtG-aG~iG~~l~~~L~~~g~~V~~~~r~~~~~------------~~~~~~~~~Dl~d~~~~~~~~~------   61 (286)
T 3gpi_A            1 MSLSKILIAG-CGDLGLELARRLTAQGHEVTGLRRSAQPM------------PAGVQTLIADVTRPDTLASIVH------   61 (286)
T ss_dssp             -CCCCEEEEC-CSHHHHHHHHHHHHTTCCEEEEECTTSCC------------CTTCCEEECCTTCGGGCTTGGG------
T ss_pred             CCCCcEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCcccc------------ccCCceEEccCCChHHHHHhhc------
Confidence            3567899999 59999999999999999999999986541            3578899999999988877664      


Q ss_pred             CCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccccccc
Q 019722          113 LPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQ  192 (336)
Q Consensus       113 ~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~~  192 (336)
                      +++|+|||+||..       ..+.+..+++|+.++..+++++..    .+     .+++|++||... ++......+   
T Consensus        62 ~~~d~vih~a~~~-------~~~~~~~~~~n~~~~~~ll~a~~~----~~-----~~~~v~~SS~~v-yg~~~~~~~---  121 (286)
T 3gpi_A           62 LRPEILVYCVAAS-------EYSDEHYRLSYVEGLRNTLSALEG----AP-----LQHVFFVSSTGV-YGQEVEEWL---  121 (286)
T ss_dssp             GCCSEEEECHHHH-------HHC-----CCSHHHHHHHHHHTTT----SC-----CCEEEEEEEGGG-CCCCCSSEE---
T ss_pred             CCCCEEEEeCCCC-------CCCHHHHHHHHHHHHHHHHHHHhh----CC-----CCEEEEEcccEE-EcCCCCCCC---
Confidence            2699999999962       345677888999999988887762    21     369999999743 332211111   


Q ss_pred             ccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHHHHHHH------HhhcC
Q 019722          193 ISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLT------SKLLK  266 (336)
Q Consensus       193 ~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~------~~~~~  266 (336)
                        .+.....+...|+.+|.+.+.+ +..          ++++.++|+.+.++....   +.........      .....
T Consensus       122 --~E~~~~~p~~~Y~~sK~~~E~~-~~~----------~~~~ilR~~~v~G~~~~~---~~~~~~~~~~~~~~~~~~~~i  185 (286)
T 3gpi_A          122 --DEDTPPIAKDFSGKRMLEAEAL-LAA----------YSSTILRFSGIYGPGRLR---MIRQAQTPEQWPARNAWTNRI  185 (286)
T ss_dssp             --CTTSCCCCCSHHHHHHHHHHHH-GGG----------SSEEEEEECEEEBTTBCH---HHHHTTCGGGSCSSBCEECEE
T ss_pred             --CCCCCCCCCChhhHHHHHHHHH-Hhc----------CCeEEEecccccCCCchh---HHHHHHhcccCCCcCceeEEE
Confidence              1222233456899999999987 442          678899999999876542   1111111000      00112


Q ss_pred             ChHHHHHHHHHHHhcCccccCCceeeccCcccccccCCCCHHHHHHHHHHHHHhhccCCCCCCCC
Q 019722          267 TIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWTSKLGSNSNEASRLWAASELLVSRDPKSVFDP  331 (336)
Q Consensus       267 ~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~p  331 (336)
                      .++|+|.+++.++..+. ....|..|+..++...+.        .++++.+.+.++...+..+.|
T Consensus       186 ~v~Dva~~~~~~~~~~~-~~~~~~~~~~~~~~~~s~--------~e~~~~i~~~~g~~~~~~~~~  241 (286)
T 3gpi_A          186 HRDDGAAFIAYLIQQRS-HAVPERLYIVTDNQPLPV--------HDLLRWLADRQGIAYPAGATP  241 (286)
T ss_dssp             EHHHHHHHHHHHHHHHT-TSCCCSEEEECCSCCEEH--------HHHHHHHHHHTTCCCCCSCCC
T ss_pred             EHHHHHHHHHHHHhhhc-cCCCCceEEEeCCCCCCH--------HHHHHHHHHHcCCCCCCCCCc
Confidence            45889999999988542 123566676666555553        778888888888877665544

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=99.73  E-value=5.5e-17  Score=146.50  Aligned_cols=224  Identities=15%  Similarity=0.060  Sum_probs=152.4

Q ss_pred             EEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCCCcc
Q 019722           37 TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLPLN  116 (336)
Q Consensus        37 ~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id  116 (336)
                      ++|||||+|+||++++++|+ +|++|++++|+..                   ++.+|+++++++.++++..     ++|
T Consensus         2 ~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~-------------------~~~~D~~d~~~~~~~~~~~-----~~d   56 (299)
T 1n2s_A            2 NILLFGKTGQVGWELQRSLA-PVGNLIALDVHSK-------------------EFCGDFSNPKGVAETVRKL-----RPD   56 (299)
T ss_dssp             EEEEECTTSHHHHHHHHHTT-TTSEEEEECTTCS-------------------SSCCCTTCHHHHHHHHHHH-----CCS
T ss_pred             eEEEECCCCHHHHHHHHHhh-cCCeEEEeccccc-------------------cccccCCCHHHHHHHHHhc-----CCC
Confidence            69999999999999999999 8999999999851                   3578999999998888754     689


Q ss_pred             EEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcccccccccCC
Q 019722          117 LLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRN  196 (336)
Q Consensus       117 ~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~~~~~~  196 (336)
                      +|||+||.....  ...+++++.+++|+.++..+++++...          +.++|++||.... +......+     .+
T Consensus        57 ~vih~a~~~~~~--~~~~~~~~~~~~n~~~~~~l~~a~~~~----------~~~~v~~SS~~vy-~~~~~~~~-----~E  118 (299)
T 1n2s_A           57 VIVNAAAHTAVD--KAESEPELAQLLNATSVEAIAKAANET----------GAWVVHYSTDYVF-PGTGDIPW-----QE  118 (299)
T ss_dssp             EEEECCCCCCHH--HHTTCHHHHHHHHTHHHHHHHHHHTTT----------TCEEEEEEEGGGS-CCCTTCCB-----CT
T ss_pred             EEEECcccCCHh--hhhcCHHHHHHHHHHHHHHHHHHHHHc----------CCcEEEEecccEE-eCCCCCCC-----CC
Confidence            999999965321  134567889999999999999887431          2489999997543 21111111     11


Q ss_pred             CCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHHHHHHHHh----hcC------
Q 019722          197 KSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSK----LLK------  266 (336)
Q Consensus       197 ~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~----~~~------  266 (336)
                      .....+...|+.+|++.+.+++.++         .+++.++|+.+.++....   ............    ...      
T Consensus       119 ~~~~~p~~~Y~~sK~~~E~~~~~~~---------~~~~ilRp~~v~G~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~  186 (299)
T 1n2s_A          119 TDATSPLNVYGKTKLAGEKALQDNC---------PKHLIFRTSWVYAGKGNN---FAKTMLRLAKERQTLSVINDQYGAP  186 (299)
T ss_dssp             TSCCCCSSHHHHHHHHHHHHHHHHC---------SSEEEEEECSEECSSSCC---HHHHHHHHHHHCSEEEEECSCEECC
T ss_pred             CCCCCCccHHHHHHHHHHHHHHHhC---------CCeEEEeeeeecCCCcCc---HHHHHHHHHhcCCCEEeecCcccCC
Confidence            1123335589999999999888754         267899999999886542   222222222211    112      


Q ss_pred             -ChHHHHHHHHHHHhcCccccC-CceeeccCcccccccCCCCHHHHHHHHHHHHHhhccC
Q 019722          267 -TIPQGAATTCYVAIHPRLVNV-SGKYFADCNEAWTSKLGSNSNEASRLWAASELLVSRD  324 (336)
Q Consensus       267 -~~~~~a~~~~~l~~~~~~~~~-~G~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~  324 (336)
                       .++|.|.+++.++..+. ... .|..|+.++....+.        .++.+.+.+.++..
T Consensus       187 i~v~Dva~~~~~~~~~~~-~~~~~~~~~~i~~~~~~s~--------~e~~~~i~~~~g~~  237 (299)
T 1n2s_A          187 TGAELLADCTAHAIRVAL-NKPEVAGLYHLVAGGTTTW--------HDYAALVFDEARKA  237 (299)
T ss_dssp             EEHHHHHHHHHHHHHHHH-HCGGGCEEEECCCBSCEEH--------HHHHHHHHHHHHHH
T ss_pred             eeHHHHHHHHHHHHHHhc-cccccCceEEEeCCCCCCH--------HHHHHHHHHHhCCC
Confidence             26899999999987442 112 366676666554442        44455555555443

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=99.71  E-value=1.9e-17  Score=148.45  Aligned_cols=207  Identities=14%  Similarity=0.036  Sum_probs=138.5

Q ss_pred             EEEEeCCCChHHHHHHHHHHHC--CCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCCC
Q 019722           37 TAIITGATSGIGAETARVLAKR--GARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLP  114 (336)
Q Consensus        37 ~~lItGgs~gIG~aia~~L~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  114 (336)
                      ++|||||+|+||++++++|+++  |++|++++|++++.....        ..++.++.+|++|++++.++++       +
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~--------~~~~~~~~~D~~d~~~~~~~~~-------~   65 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALA--------AQGITVRQADYGDEAALTSALQ-------G   65 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHH--------HTTCEEEECCTTCHHHHHHHTT-------T
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhh--------cCCCeEEEcCCCCHHHHHHHHh-------C
Confidence            4899999999999999999999  999999999876544322        1367889999999988887764       5


Q ss_pred             ccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccccccccc
Q 019722          115 LNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQIS  194 (336)
Q Consensus       115 id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~~~~  194 (336)
                      +|++||+||...              ..|+.+...+++++    ++.+     .+++|++||.... .            
T Consensus        66 ~d~vi~~a~~~~--------------~~~~~~~~~l~~a~----~~~~-----~~~~v~~Ss~~~~-~------------  109 (286)
T 2zcu_A           66 VEKLLLISSSEV--------------GQRAPQHRNVINAA----KAAG-----VKFIAYTSLLHAD-T------------  109 (286)
T ss_dssp             CSEEEECC----------------------CHHHHHHHHH----HHHT-----CCEEEEEEETTTT-T------------
T ss_pred             CCEEEEeCCCCc--------------hHHHHHHHHHHHHH----HHcC-----CCEEEEECCCCCC-C------------
Confidence            899999999521              02555555555444    4433     3699999997543 1            


Q ss_pred             CCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHHHHHH----H----HhhcC
Q 019722          195 RNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFL----T----SKLLK  266 (336)
Q Consensus       195 ~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~----~----~~~~~  266 (336)
                           .+  ..|+.+|.+.+.+++.       .+  ++++.|+||++.+++...    .......-    .    .....
T Consensus       110 -----~~--~~y~~sK~~~e~~~~~-------~~--~~~~ilrp~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~i  169 (286)
T 2zcu_A          110 -----SP--LGLADEHIETEKMLAD-------SG--IVYTLLRNGWYSENYLAS----APAALEHGVFIGAAGDGKIASA  169 (286)
T ss_dssp             -----CC--STTHHHHHHHHHHHHH-------HC--SEEEEEEECCBHHHHHTT----HHHHHHHTEEEESCTTCCBCCB
T ss_pred             -----Cc--chhHHHHHHHHHHHHH-------cC--CCeEEEeChHHhhhhHHH----hHHhhcCCceeccCCCCccccc
Confidence                 11  2699999999988763       24  999999999887654321    11111100    0    01224


Q ss_pred             ChHHHHHHHHHHHhcCccccCCceeeccCcccccccCCCCHHHHHHHHHHHHHhhccCC
Q 019722          267 TIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWTSKLGSNSNEASRLWAASELLVSRDP  325 (336)
Q Consensus       267 ~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~  325 (336)
                      .++|+|.+++.++..+.   .+|+.|..++....+-        .++.+.+.+.++...
T Consensus       170 ~~~Dva~~~~~~~~~~~---~~g~~~~i~~~~~~s~--------~e~~~~i~~~~g~~~  217 (286)
T 2zcu_A          170 TRADYAAAAARVISEAG---HEGKVYELAGDSAWTL--------TQLAAELTKQSGKQV  217 (286)
T ss_dssp             CHHHHHHHHHHHHHSSS---CTTCEEEECCSSCBCH--------HHHHHHHHHHHSSCC
T ss_pred             cHHHHHHHHHHHhcCCC---CCCceEEEeCCCcCCH--------HHHHHHHHHHHCCCC
Confidence            67899999999998543   3677777777654442        555555556666543

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=99.69  E-value=1e-16  Score=144.97  Aligned_cols=224  Identities=11%  Similarity=-0.035  Sum_probs=146.1

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHCC-CEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCC
Q 019722           35 SVTAIITGATSGIGAETARVLAKRG-ARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNL  113 (336)
Q Consensus        35 gk~~lItGgs~gIG~aia~~L~~~G-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  113 (336)
                      +|+++||||+|+||++++++|+++| ++|++++|++++...  +.+..    .++.++++|++|++++.++++       
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~--~~l~~----~~~~~~~~D~~d~~~l~~~~~-------   71 (299)
T 2wm3_A            5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAA--KELRL----QGAEVVQGDQDDQVIMELALN-------   71 (299)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHH--HHHHH----TTCEEEECCTTCHHHHHHHHT-------
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHH--HHHHH----CCCEEEEecCCCHHHHHHHHh-------
Confidence            5899999999999999999999999 999999999765421  22222    368889999999999888775       


Q ss_pred             CccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcccccccc
Q 019722          114 PLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQI  193 (336)
Q Consensus       114 ~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~~~  193 (336)
                      ++|+||||++.....          ....|+.    ..+.+++.+++.+     .++||++|+. +......        
T Consensus        72 ~~d~vi~~a~~~~~~----------~~~~~~~----~~~~~~~aa~~~g-----v~~iv~~S~~-~~~~~~~--------  123 (299)
T 2wm3_A           72 GAYATFIVTNYWESC----------SQEQEVK----QGKLLADLARRLG-----LHYVVYSGLE-NIKKLTA--------  123 (299)
T ss_dssp             TCSEEEECCCHHHHT----------CHHHHHH----HHHHHHHHHHHHT-----CSEEEECCCC-CHHHHTT--------
T ss_pred             cCCEEEEeCCCCccc----------cchHHHH----HHHHHHHHHHHcC-----CCEEEEEcCc-cccccCC--------
Confidence            589999999853110          1233443    4455555555543     3689985553 3322100        


Q ss_pred             cCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccch-hHHHH---HHHH----HHhhc
Q 019722          194 SRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREG-FITDL---VFFL----TSKLL  265 (336)
Q Consensus       194 ~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~-~~~~~---~~~~----~~~~~  265 (336)
                            ......|+.+|.+++.+++.       .|  ++++.|+||++.+++...... .....   ....    .....
T Consensus       124 ------~~~~~~y~~sK~~~e~~~~~-------~g--i~~~ilrp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~  188 (299)
T 2wm3_A          124 ------GRLAAAHFDGKGEVEEYFRD-------IG--VPMTSVRLPCYFENLLSHFLPQKAPDGKSYLLSLPTGDVPMDG  188 (299)
T ss_dssp             ------TSCCCHHHHHHHHHHHHHHH-------HT--CCEEEEECCEEGGGGGTTTCCEECTTSSSEEECCCCTTSCEEE
T ss_pred             ------CcccCchhhHHHHHHHHHHH-------CC--CCEEEEeecHHhhhchhhcCCcccCCCCEEEEEecCCCCccce
Confidence                  01124699999999988764       24  999999999998875432110 00000   0000    01123


Q ss_pred             CChHHHHHHHHHHHhcCccccCCceeeccCcccccccCCCCHHHHHHHHHHHHHhhccCC
Q 019722          266 KTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWTSKLGSNSNEASRLWAASELLVSRDP  325 (336)
Q Consensus       266 ~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~  325 (336)
                      ..++|++..++.++..+. . ..|+.|...|. ..+.        +++.+.+.+.+|++.
T Consensus       189 i~~~Dva~~~~~~l~~~~-~-~~g~~~~~~g~-~~s~--------~e~~~~~~~~~g~~~  237 (299)
T 2wm3_A          189 MSVSDLGPVVLSLLKMPE-K-YVGQNIGLSTC-RHTA--------EEYAALLTKHTRKVV  237 (299)
T ss_dssp             ECGGGHHHHHHHHHHSHH-H-HTTCEEECCSE-EECH--------HHHHHHHHHHHSSCE
T ss_pred             ecHHHHHHHHHHHHcChh-h-hCCeEEEeeec-cCCH--------HHHHHHHHHHHCCCc
Confidence            467899999999987532 1 25777777764 3442        666666777777654

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=99.68  E-value=1.2e-16  Score=143.63  Aligned_cols=209  Identities=11%  Similarity=0.049  Sum_probs=136.9

Q ss_pred             EEEEeCCCChHHHHHHHHHHHC-CCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCCCc
Q 019722           37 TAIITGATSGIGAETARVLAKR-GARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLPL  115 (336)
Q Consensus        37 ~~lItGgs~gIG~aia~~L~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i  115 (336)
                      ++|||||+|+||++++++|+++ |++|++++|++++....    .    ..++.++++|++|++++.++++       ++
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~----~----~~~v~~~~~D~~d~~~l~~~~~-------~~   66 (289)
T 3e48_A            2 NIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDD----W----RGKVSVRQLDYFNQESMVEAFK-------GM   66 (289)
T ss_dssp             CEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGG----G----BTTBEEEECCTTCHHHHHHHTT-------TC
T ss_pred             EEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHh----h----hCCCEEEEcCCCCHHHHHHHHh-------CC
Confidence            5899999999999999999998 89999999998754321    1    3579999999999998887765       68


Q ss_pred             cEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcccccccccC
Q 019722          116 NLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISR  195 (336)
Q Consensus       116 d~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~~~~~  195 (336)
                      |+||||||.....            ..|+.+.    +.+++.+++.+     -++||++||......             
T Consensus        67 d~vi~~a~~~~~~------------~~~~~~~----~~l~~aa~~~g-----v~~iv~~Ss~~~~~~-------------  112 (289)
T 3e48_A           67 DTVVFIPSIIHPS------------FKRIPEV----ENLVYAAKQSG-----VAHIIFIGYYADQHN-------------  112 (289)
T ss_dssp             SEEEECCCCCCSH------------HHHHHHH----HHHHHHHHHTT-----CCEEEEEEESCCSTT-------------
T ss_pred             CEEEEeCCCCccc------------hhhHHHH----HHHHHHHHHcC-----CCEEEEEcccCCCCC-------------
Confidence            9999999864321            1244443    45555555543     369999999543211             


Q ss_pred             CCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHHHHHHH----H----hhcCC
Q 019722          196 NKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLT----S----KLLKT  267 (336)
Q Consensus       196 ~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~----~----~~~~~  267 (336)
                          .+    |..++..     ..+...+...|  ++++.|+||++.+++...    .........    .    .....
T Consensus       113 ----~~----~~~~~~~-----~~~e~~~~~~g--~~~~ilrp~~~~~~~~~~----~~~~~~~~~~~~~~g~~~~~~i~  173 (289)
T 3e48_A          113 ----NP----FHMSPYF-----GYASRLLSTSG--IDYTYVRMAMYMDPLKPY----LPELMNMHKLIYPAGDGRINYIT  173 (289)
T ss_dssp             ----CC----STTHHHH-----HHHHHHHHHHC--CEEEEEEECEESTTHHHH----HHHHHHHTEECCCCTTCEEEEEC
T ss_pred             ----CC----CccchhH-----HHHHHHHHHcC--CCEEEEeccccccccHHH----HHHHHHCCCEecCCCCceeeeEE
Confidence                00    1111111     11222333445  999999999998875321    111111100    0    01346


Q ss_pred             hHHHHHHHHHHHhcCccccCCceeeccCcccccccCCCCHHHHHHHHHHHHHhhccCC
Q 019722          268 IPQGAATTCYVAIHPRLVNVSGKYFADCNEAWTSKLGSNSNEASRLWAASELLVSRDP  325 (336)
Q Consensus       268 ~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~  325 (336)
                      ++|+|..++.++..+..   .|+.|..+ ....+.        +++.+.+.+.++++.
T Consensus       174 ~~Dva~~~~~~l~~~~~---~g~~~~~~-~~~~s~--------~e~~~~~~~~~g~~~  219 (289)
T 3e48_A          174 RNDIARGVIAIIKNPDT---WGKRYLLS-GYSYDM--------KELAAILSEASGTEI  219 (289)
T ss_dssp             HHHHHHHHHHHHHCGGG---TTCEEEEC-CEEEEH--------HHHHHHHHHHHTSCC
T ss_pred             HHHHHHHHHHHHcCCCc---CCceEEeC-CCcCCH--------HHHHHHHHHHHCCce
Confidence            78999999999986543   27777777 554443        667777777777653

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=99.67  E-value=2.7e-15  Score=138.44  Aligned_cols=228  Identities=12%  Similarity=0.007  Sum_probs=146.9

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCCh----HHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHH
Q 019722           33 LSSVTAIITGATSGIGAETARVLAKRGARLVLPARSL----KAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQF  108 (336)
Q Consensus        33 l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~----~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~  108 (336)
                      |+.+++|||||||+||++++++|+++|++|+++.|+.    ++.+ ..+.+.    ..++.++.+|++|.+++.+++++.
T Consensus         8 M~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~-~~~~l~----~~~v~~~~~Dl~d~~~l~~~~~~~   82 (346)
T 3i6i_A            8 SPKGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAK-IFKALE----DKGAIIVYGLINEQEAMEKILKEH   82 (346)
T ss_dssp             ---CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHH-HHHHHH----HTTCEEEECCTTCHHHHHHHHHHT
T ss_pred             CCCCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHH-HHHHHH----hCCcEEEEeecCCHHHHHHHHhhC
Confidence            5578999999999999999999999999999999976    3332 222332    357899999999999999888752


Q ss_pred             HhcCCCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccc
Q 019722          109 HSLNLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIR  188 (336)
Q Consensus       109 ~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~  188 (336)
                           ++|+|||+||..                 |+.+...+++++...    +.    -.++|.  |..+...      
T Consensus        83 -----~~d~Vi~~a~~~-----------------n~~~~~~l~~aa~~~----g~----v~~~v~--S~~g~~~------  124 (346)
T 3i6i_A           83 -----EIDIVVSTVGGE-----------------SILDQIALVKAMKAV----GT----IKRFLP--SEFGHDV------  124 (346)
T ss_dssp             -----TCCEEEECCCGG-----------------GGGGHHHHHHHHHHH----CC----CSEEEC--SCCSSCT------
T ss_pred             -----CCCEEEECCchh-----------------hHHHHHHHHHHHHHc----CC----ceEEee--cccCCCC------
Confidence                 699999999962                 666666666665432    10    136654  3322110      


Q ss_pred             ccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHH--HHHH--H----
Q 019722          189 YLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITD--LVFF--L----  260 (336)
Q Consensus       189 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~--~~~~--~----  260 (336)
                            +.....+....|+.+|.+.+.+.+.       .|  +.+..|+||++.+............  ....  +    
T Consensus       125 ------~e~~~~~p~~~y~~sK~~~e~~l~~-------~g--~~~tivrpg~~~g~~~~~~~~~~~~~~~~~~~~~~g~g  189 (346)
T 3i6i_A          125 ------NRADPVEPGLNMYREKRRVRQLVEE-------SG--IPFTYICCNSIASWPYYNNIHPSEVLPPTDFFQIYGDG  189 (346)
T ss_dssp             ------TTCCCCTTHHHHHHHHHHHHHHHHH-------TT--CCBEEEECCEESSCCCSCC-----CCCCSSCEEEETTS
T ss_pred             ------CccCcCCCcchHHHHHHHHHHHHHH-------cC--CCEEEEEecccccccCccccccccccCCCceEEEccCC
Confidence                  1111235567899999998877764       34  9999999999987653332110000  0000  0    


Q ss_pred             -HHhhcCChHHHHHHHHHHHhcCccccCCceeeccCc-ccccccCCCCHHHHHHHHHHHHHhhccCCCCCC
Q 019722          261 -TSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCN-EAWTSKLGSNSNEASRLWAASELLVSRDPKSVF  329 (336)
Q Consensus       261 -~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~-~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~  329 (336)
                       .......++|+|..++.++..+..   .|+.+...+ +...+-        +++.+.+.+++|......+
T Consensus       190 ~~~~~~i~~~Dva~~~~~~l~~~~~---~~~~~~i~g~~~~~s~--------~e~~~~~~~~~g~~~~~~~  249 (346)
T 3i6i_A          190 NVKAYFVAGTDIGKFTMKTVDDVRT---LNKSVHFRPSCNCLNI--------NELASVWEKKIGRTLPRVT  249 (346)
T ss_dssp             CCCEEEECHHHHHHHHHHHTTCGGG---TTEEEECCCGGGEECH--------HHHHHHHHHHHTSCCCEEE
T ss_pred             CceEEecCHHHHHHHHHHHHhCccc---cCeEEEEeCCCCCCCH--------HHHHHHHHHHHCCCCceEe
Confidence             011234678999999999986532   355555554 344443        6677777777776654433

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=99.67  E-value=2.2e-16  Score=146.38  Aligned_cols=204  Identities=16%  Similarity=0.078  Sum_probs=131.8

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEecc-CCCHHHHHHHHHHHHhc
Q 019722           33 LSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLD-LSSLSSVRNFVSQFHSL  111 (336)
Q Consensus        33 l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D-l~~~~~v~~~~~~~~~~  111 (336)
                      +.+++++||||+|+||++++++|+++|++|++++|+.++..  .+.+..   ..++.++.+| ++|++++.++++     
T Consensus         3 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~--~~~l~~---~~~v~~v~~D~l~d~~~l~~~~~-----   72 (352)
T 1xgk_A            3 QQKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLI--AEELQA---IPNVTLFQGPLLNNVPLMDTLFE-----   72 (352)
T ss_dssp             CCCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHH--HHHHHT---STTEEEEESCCTTCHHHHHHHHT-----
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhh--HHHHhh---cCCcEEEECCccCCHHHHHHHHh-----
Confidence            45788999999999999999999999999999999876542  122322   2368899999 999999888765     


Q ss_pred             CCCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCcc-ccccCCccccc
Q 019722          112 NLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIH-SWFSGDMIRYL  190 (336)
Q Consensus       112 ~~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~-~~~~~~~~~~~  190 (336)
                        .+|++|+|++...      .       ..|..+     +.+++.+++.+.    .+++|++||... .++        
T Consensus        73 --~~d~Vi~~a~~~~------~-------~~~~~~-----~~l~~aa~~~g~----v~~~V~~SS~~~~~~~--------  120 (352)
T 1xgk_A           73 --GAHLAFINTTSQA------G-------DEIAIG-----KDLADAAKRAGT----IQHYIYSSMPDHSLYG--------  120 (352)
T ss_dssp             --TCSEEEECCCSTT------S-------CHHHHH-----HHHHHHHHHHSC----CSEEEEEECCCGGGTS--------
T ss_pred             --cCCEEEEcCCCCC------c-------HHHHHH-----HHHHHHHHHcCC----ccEEEEeCCccccccC--------
Confidence              5899999997531      0       123332     444455544320    159999999762 222        


Q ss_pred             ccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhH-----HH-HH-HH-H--
Q 019722          191 GQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFI-----TD-LV-FF-L--  260 (336)
Q Consensus       191 ~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~-----~~-~~-~~-~--  260 (336)
                               ......|+.+|++.+.+++..       +  ++++.|+||++-..........+     .. .. .. .  
T Consensus       121 ---------~~~~~~y~~sK~~~E~~~~~~-------g--i~~~ivrpg~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~  182 (352)
T 1xgk_A          121 ---------PWPAVPMWAPKFTVENYVRQL-------G--LPSTFVYAGIYNNNFTSLPYPLFQMELMPDGTFEWHAPFD  182 (352)
T ss_dssp             ---------SCCCCTTTHHHHHHHHHHHTS-------S--SCEEEEEECEEGGGCBSSSCSSCBEEECTTSCEEEEESSC
T ss_pred             ---------CCCCccHHHHHHHHHHHHHHc-------C--CCEEEEecceecCCchhcccccccccccCCCceEEeeccC
Confidence                     112246899999999988762       4  89999999987544322100000     00 00 00 0  


Q ss_pred             --HHhhcCCh-HHHHHHHHHHHhcCccccCCceeeccCcc
Q 019722          261 --TSKLLKTI-PQGAATTCYVAIHPRLVNVSGKYFADCNE  297 (336)
Q Consensus       261 --~~~~~~~~-~~~a~~~~~l~~~~~~~~~~G~~~~~~~~  297 (336)
                        .......+ +|+|..++.++..+. ....|+.|...+.
T Consensus       183 ~~~~~~~i~v~~Dva~ai~~~l~~~~-~~~~g~~~~l~~~  221 (352)
T 1xgk_A          183 PDIPLPWLDAEHDVGPALLQIFKDGP-QKWNGHRIALTFE  221 (352)
T ss_dssp             TTSCEEEECHHHHHHHHHHHHHHHCH-HHHTTCEEEECSE
T ss_pred             CCCceeeEecHHHHHHHHHHHHhCCc-hhhCCeEEEEecC
Confidence              01112356 799999999987542 1234666655553

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=99.66  E-value=9.1e-16  Score=137.65  Aligned_cols=220  Identities=11%  Similarity=0.001  Sum_probs=146.5

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCCCc
Q 019722           36 VTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLPL  115 (336)
Q Consensus        36 k~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i  115 (336)
                      +++||||| |.||.+++++|+++|++|++++|+..+.....        ..++.++.+|+++.+            +.++
T Consensus         6 ~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~--------~~~~~~~~~D~~d~~------------~~~~   64 (286)
T 3ius_A            6 GTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIR--------ASGAEPLLWPGEEPS------------LDGV   64 (286)
T ss_dssp             CEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHH--------HTTEEEEESSSSCCC------------CTTC
T ss_pred             CcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHh--------hCCCeEEEecccccc------------cCCC
Confidence            78999998 99999999999999999999999987655432        246899999999833            4579


Q ss_pred             cEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHH--hhccCCCCCeEEEEcCCccccccCCcccccccc
Q 019722          116 NLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIE--TAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQI  193 (336)
Q Consensus       116 d~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~--~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~~~  193 (336)
                      |+|||+|+.....     +.              ..+.++..+.+  .+     .+++|++||.. .++......+    
T Consensus        65 d~vi~~a~~~~~~-----~~--------------~~~~l~~a~~~~~~~-----~~~~v~~Ss~~-vyg~~~~~~~----  115 (286)
T 3ius_A           65 THLLISTAPDSGG-----DP--------------VLAALGDQIAARAAQ-----FRWVGYLSTTA-VYGDHDGAWV----  115 (286)
T ss_dssp             CEEEECCCCBTTB-----CH--------------HHHHHHHHHHHTGGG-----CSEEEEEEEGG-GGCCCTTCEE----
T ss_pred             CEEEECCCccccc-----cH--------------HHHHHHHHHHhhcCC-----ceEEEEeecce-ecCCCCCCCc----
Confidence            9999999965321     11              12344444544  22     36999999964 3332221111    


Q ss_pred             cCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHHHHHH----HHhhcCChH
Q 019722          194 SRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFL----TSKLLKTIP  269 (336)
Q Consensus       194 ~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~----~~~~~~~~~  269 (336)
                       ++.....+...|+.+|.+.+.+++.+      .+  ++++.++|+.+.++...............+    ........+
T Consensus       116 -~E~~~~~p~~~Y~~sK~~~E~~~~~~------~~--~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  186 (286)
T 3ius_A          116 -DETTPLTPTAARGRWRVMAEQQWQAV------PN--LPLHVFRLAGIYGPGRGPFSKLGKGGIRRIIKPGQVFSRIHVE  186 (286)
T ss_dssp             -CTTSCCCCCSHHHHHHHHHHHHHHHS------TT--CCEEEEEECEEEBTTBSSSTTSSSSCCCEEECTTCCBCEEEHH
T ss_pred             -CCCCCCCCCCHHHHHHHHHHHHHHhh------cC--CCEEEEeccceECCCchHHHHHhcCCccccCCCCcccceEEHH
Confidence             11222334467999999999988876      34  999999999998875433211000000000    011223458


Q ss_pred             HHHHHHHHHHhcCccccCCceeeccCcccccccCCCCHHHHHHHHHHHHHhhccCCC
Q 019722          270 QGAATTCYVAIHPRLVNVSGKYFADCNEAWTSKLGSNSNEASRLWAASELLVSRDPK  326 (336)
Q Consensus       270 ~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~  326 (336)
                      |+|.+++.++..+.    .|+.|+..+....+.        .++.+.+.+.++..++
T Consensus       187 Dva~a~~~~~~~~~----~g~~~~i~~~~~~s~--------~e~~~~i~~~~g~~~~  231 (286)
T 3ius_A          187 DIAQVLAASMARPD----PGAVYNVCDDEPVPP--------QDVIAYAAELQGLPLP  231 (286)
T ss_dssp             HHHHHHHHHHHSCC----TTCEEEECCSCCBCH--------HHHHHHHHHHHTCCCC
T ss_pred             HHHHHHHHHHhCCC----CCCEEEEeCCCCccH--------HHHHHHHHHHcCCCCC
Confidence            99999999998554    576777776655553        6777777788877654

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=99.65  E-value=1.3e-15  Score=137.97  Aligned_cols=221  Identities=14%  Similarity=0.099  Sum_probs=136.1

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCCh-------HHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHH
Q 019722           35 SVTAIITGATSGIGAETARVLAKRGARLVLPARSL-------KAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQ  107 (336)
Q Consensus        35 gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~-------~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~  107 (336)
                      +++++||||+|+||.+++++|+++|++|++++|+.       ++.+. .+++..    .++.++++|++|++++.++++ 
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~-~~~l~~----~~v~~v~~D~~d~~~l~~~~~-   75 (307)
T 2gas_A            2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEEL-IDNYQS----LGVILLEGDINDHETLVKAIK-   75 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHH-HHHHHH----TTCEEEECCTTCHHHHHHHHT-
T ss_pred             CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHH-HHHHHh----CCCEEEEeCCCCHHHHHHHHh-
Confidence            57899999999999999999999999999999986       44433 233322    368899999999998888775 


Q ss_pred             HHhcCCCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcc
Q 019722          108 FHSLNLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMI  187 (336)
Q Consensus       108 ~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~  187 (336)
                            ++|+||||||...                 +.+...+++    .+++.+.    -+++|  .|..+...     
T Consensus        76 ------~~d~vi~~a~~~~-----------------~~~~~~l~~----aa~~~g~----v~~~v--~S~~g~~~-----  117 (307)
T 2gas_A           76 ------QVDIVICAAGRLL-----------------IEDQVKIIK----AIKEAGN----VKKFF--PSEFGLDV-----  117 (307)
T ss_dssp             ------TCSEEEECSSSSC-----------------GGGHHHHHH----HHHHHCC----CSEEE--CSCCSSCT-----
T ss_pred             ------CCCEEEECCcccc-----------------cccHHHHHH----HHHhcCC----ceEEe--ecccccCc-----
Confidence                  6899999999642                 122233333    3444320    14776  34333211     


Q ss_pred             cccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhH-----HHHHHHH--
Q 019722          188 RYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFI-----TDLVFFL--  260 (336)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~-----~~~~~~~--  260 (336)
                        +    ......+....| .+|++++.+++.       .+  ++++.|+||++.+++........     .......  
T Consensus       118 --~----~~~~~~p~~~~y-~sK~~~e~~~~~-------~~--i~~~~lrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (307)
T 2gas_A          118 --D----RHDAVEPVRQVF-EEKASIRRVIEA-------EG--VPYTYLCCHAFTGYFLRNLAQLDATDPPRDKVVILGD  181 (307)
T ss_dssp             --T----SCCCCTTHHHHH-HHHHHHHHHHHH-------HT--CCBEEEECCEETTTTGGGTTCTTCSSCCSSEEEEETT
T ss_pred             --c----cccCCCcchhHH-HHHHHHHHHHHH-------cC--CCeEEEEcceeeccccccccccccccCCCCeEEEecC
Confidence              0    001113446679 999999887753       24  89999999999876532211000     0000000  


Q ss_pred             --HHhhcCChHHHHHHHHHHHhcCccccCCceeeccCcc-cccccCCCCHHHHHHHHHHHHHhhccCCC
Q 019722          261 --TSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNE-AWTSKLGSNSNEASRLWAASELLVSRDPK  326 (336)
Q Consensus       261 --~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~-~~~~~~~~~~~~~~~~w~~~~~~~~~~~~  326 (336)
                        .......++|++..++.++..+..   .|+.+...+. ...+.        +++.+.+.+++|....
T Consensus       182 ~~~~~~~i~~~Dva~~~~~~l~~~~~---~~~~~~~~~~~~~~s~--------~e~~~~~~~~~g~~~~  239 (307)
T 2gas_A          182 GNVKGAYVTEADVGTFTIRAANDPNT---LNKAVHIRLPKNYLTQ--------NEVIALWEKKIGKTLE  239 (307)
T ss_dssp             SCSEEEEECHHHHHHHHHHHHTCGGG---TTEEEECCCGGGEEEH--------HHHHHHHHHHHTSCCE
T ss_pred             CCcceEEeeHHHHHHHHHHHHcCccc---cCceEEEeCCCCcCCH--------HHHHHHHHHHhCCCCc
Confidence              012234678999999999875432   3555544432 33332        4555555566655443

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=99.64  E-value=4.1e-15  Score=137.82  Aligned_cols=242  Identities=14%  Similarity=0.023  Sum_probs=153.6

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHCC-----CEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           35 SVTAIITGATSGIGAETARVLAKRG-----ARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        35 gk~~lItGgs~gIG~aia~~L~~~G-----~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      |+++|||||+|+||++++++|+++|     ++|++++|+.....         ....++.++.+|+++++++.++++.  
T Consensus         1 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~---------~~~~~~~~~~~Dl~d~~~~~~~~~~--   69 (364)
T 2v6g_A            1 SSVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW---------HEDNPINYVQCDISDPDDSQAKLSP--   69 (364)
T ss_dssp             CEEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC---------CCSSCCEEEECCTTSHHHHHHHHTT--
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc---------cccCceEEEEeecCCHHHHHHHHhc--
Confidence            5789999999999999999999999     99999999865422         0135788999999999988777652  


Q ss_pred             hcCCCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEE-------EEcCCccccc
Q 019722          110 SLNLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIV-------NVSSSIHSWF  182 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV-------~vsS~~~~~~  182 (336)
                        .+++|+|||+||...       .+.++.+++|+.++..+++++.+....       -.++|       ++||.. .++
T Consensus        70 --~~~~d~vih~a~~~~-------~~~~~~~~~n~~~~~~l~~a~~~~~~~-------~~~~v~~~g~~i~~Ss~~-vyg  132 (364)
T 2v6g_A           70 --LTDVTHVFYVTWANR-------STEQENCEANSKMFRNVLDAVIPNCPN-------LKHISLQTGRKHYMGPFE-SYG  132 (364)
T ss_dssp             --CTTCCEEEECCCCCC-------SSHHHHHHHHHHHHHHHHHHHTTTCTT-------CCEEEEECCTHHHHCCGG-GTT
T ss_pred             --CCCCCEEEECCCCCc-------chHHHHHHHhHHHHHHHHHHHHHhccc-------cceEEeccCceEEEechh-hcc
Confidence              224999999999642       356789999999999999988764211       24776       566643 332


Q ss_pred             cC--CcccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccch-hHHH-HHH
Q 019722          183 SG--DMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREG-FITD-LVF  258 (336)
Q Consensus       183 ~~--~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~-~~~~-~~~  258 (336)
                      ..  ....++    ++....+....|.    +.+.+++.++.+    ..++++..++|+.+.++....... .... ...
T Consensus       133 ~~~~~~~~~~----E~~~~~~~~~~y~----~~E~~~~~~~~~----~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~  200 (364)
T 2v6g_A          133 KIESHDPPYT----EDLPRLKYMNFYY----DLEDIMLEEVEK----KEGLTWSVHRPGNIFGFSPYSMMNLVGTLCVYA  200 (364)
T ss_dssp             TSCCCCSSBC----TTSCCCSSCCHHH----HHHHHHHHHHTT----STTCEEEEEEESSEECCCTTCSSCHHHHHHHHH
T ss_pred             ccccCCCCCC----ccccCCccchhhH----HHHHHHHHHhhc----CCCceEEEECCCceeCCCCCcccchHHHHHHHH
Confidence            21  001111    1110112223452    244444444322    112999999999999876543222 1111 111


Q ss_pred             HH---HHh--h-c------------CChHHHHHHHHHHHhcCccccCCceeeccCcccccccCCCCHHHHHHHHHHHHHh
Q 019722          259 FL---TSK--L-L------------KTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWTSKLGSNSNEASRLWAASELL  320 (336)
Q Consensus       259 ~~---~~~--~-~------------~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~  320 (336)
                      .+   ...  . .            ...+++|.+++.++..+.   ..|+.|+..+....+-        .++++.+.+.
T Consensus       201 ~~~~~~g~~~~~~g~~~~~~~~~~~~~v~Dva~a~~~~~~~~~---~~g~~~ni~~~~~~s~--------~e~~~~i~~~  269 (364)
T 2v6g_A          201 AICKHEGKVLRFTGCKAAWDGYSDCSDADLIAEHHIWAAVDPY---AKNEAFNVSNGDVFKW--------KHFWKVLAEQ  269 (364)
T ss_dssp             HHHHHHTCCBCCCSCHHHHHSCBCCEEHHHHHHHHHHHHHCGG---GTTEEEEECCSCCBCH--------HHHHHHHHHH
T ss_pred             HHHHhcCCceecCCCcccccccCCCCcHHHHHHHHHHHHhCCC---CCCceEEecCCCcCCH--------HHHHHHHHHH
Confidence            11   010  0 1            112668889888887543   2577777776655553        7788888888


Q ss_pred             hccCCCC
Q 019722          321 VSRDPKS  327 (336)
Q Consensus       321 ~~~~~~~  327 (336)
                      ++.....
T Consensus       270 ~g~~~~~  276 (364)
T 2v6g_A          270 FGVECGE  276 (364)
T ss_dssp             HTCCBCC
T ss_pred             hCCCCCC
Confidence            8876543

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=99.64  E-value=1.7e-15  Score=141.15  Aligned_cols=188  Identities=14%  Similarity=0.042  Sum_probs=136.3

Q ss_pred             EEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCCCc
Q 019722           37 TAIITGATSGIGAETARVLAKRGA-RLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLPL  115 (336)
Q Consensus        37 ~~lItGgs~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i  115 (336)
                      ++|||||+|+||++++++|+++|+ +|+.++|+                           ++++++.++++       ++
T Consensus         2 ~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~~---------------------------~d~~~l~~~~~-------~~   47 (369)
T 3st7_A            2 NIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQ---------------------------TKEEELESALL-------KA   47 (369)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHCCCEEEECCTT---------------------------CCHHHHHHHHH-------HC
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEECCC---------------------------CCHHHHHHHhc-------cC
Confidence            699999999999999999999998 77777665                           67788888776       48


Q ss_pred             cEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcccccccccC
Q 019722          116 NLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISR  195 (336)
Q Consensus       116 d~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~~~~~  195 (336)
                      |+|||+||....      ++.++.+++|+.++..+++++..    .+    ...++|++||.....              
T Consensus        48 d~Vih~a~~~~~------~~~~~~~~~n~~~~~~l~~a~~~----~~----~~~~~v~~Ss~~~~~--------------   99 (369)
T 3st7_A           48 DFIVHLAGVNRP------EHDKEFSLGNVSYLDHVLDILTR----NT----KKPAILLSSSIQATQ--------------   99 (369)
T ss_dssp             SEEEECCCSBCT------TCSTTCSSSCCBHHHHHHHHHTT----CS----SCCEEEEEEEGGGGS--------------
T ss_pred             CEEEECCcCCCC------CCHHHHHHHHHHHHHHHHHHHHH----hC----CCCeEEEeCchhhcC--------------
Confidence            999999997542      34566788899999888887643    11    124899999975421              


Q ss_pred             CCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCcc-chhHHHHHHHHHHhh----------
Q 019722          196 NKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRER-EGFITDLVFFLTSKL----------  264 (336)
Q Consensus       196 ~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~-~~~~~~~~~~~~~~~----------  264 (336)
                             ...|+.+|.+.+.+++.++++.   +  +++..+.|+.+.++..... ......+........          
T Consensus       100 -------~~~Y~~sK~~~E~~~~~~~~~~---g--~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  167 (369)
T 3st7_A          100 -------DNPYGESKLQGEQLLREYAEEY---G--NTVYIYRWPNLFGKWCKPNYNSVIATFCYKIARNEEIQVNDRNVE  167 (369)
T ss_dssp             -------CSHHHHHHHHHHHHHHHHHHHH---C--CCEEEEEECEEECTTCCTTSSCHHHHHHHHHHTTCCCCCSCTTCE
T ss_pred             -------CCCchHHHHHHHHHHHHHHHHh---C--CCEEEEECCceeCCCCCCCcchHHHHHHHHHHcCCCeEecCCCeE
Confidence                   3469999999999999998875   3  8999999999998865432 123333333332211          


Q ss_pred             --cCChHHHHHHHHHHHhcCccccCCceeeccCccccc
Q 019722          265 --LKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWT  300 (336)
Q Consensus       265 --~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~  300 (336)
                        ...++|+|.+++.++..+...  .|..+...+....
T Consensus       168 ~~~i~v~Dva~~~~~~l~~~~~~--~~~~~~i~~~~~~  203 (369)
T 3st7_A          168 LTLNYVDDIVAEIKRAIEGTPTI--ENGVPTVPNVFKV  203 (369)
T ss_dssp             EEEEEHHHHHHHHHHHHHTCCCE--ETTEECCSCCEEE
T ss_pred             EEEEEHHHHHHHHHHHHhCCccc--CCceEEeCCCCce
Confidence              123688899999999865431  2667766665433

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=99.59  E-value=3.7e-15  Score=135.93  Aligned_cols=221  Identities=13%  Similarity=0.000  Sum_probs=132.1

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCCh-H----HHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           35 SVTAIITGATSGIGAETARVLAKRGARLVLPARSL-K----AAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        35 gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~-~----~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      .++++||||+|+||.+++++|+++|++|++++|+. .    ...+.++.+.    ..++.++++|++|++++.++++   
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~----~~~v~~v~~D~~d~~~l~~a~~---   76 (321)
T 3c1o_A            4 MEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFR----SMGVTIIEGEMEEHEKMVSVLK---   76 (321)
T ss_dssp             CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHH----HTTCEEEECCTTCHHHHHHHHT---
T ss_pred             ccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhh----cCCcEEEEecCCCHHHHHHHHc---
Confidence            36799999999999999999999999999999986 1    1222222332    2468899999999999888775   


Q ss_pred             hcCCCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcccc
Q 019722          110 SLNLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRY  189 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~  189 (336)
                          ++|+|||||+...                 +    ...+.+++.+++.+.    -+++|  .|..+...       
T Consensus        77 ----~~d~vi~~a~~~~-----------------~----~~~~~l~~aa~~~g~----v~~~v--~S~~g~~~-------  118 (321)
T 3c1o_A           77 ----QVDIVISALPFPM-----------------I----SSQIHIINAIKAAGN----IKRFL--PSDFGCEE-------  118 (321)
T ss_dssp             ----TCSEEEECCCGGG-----------------S----GGGHHHHHHHHHHCC----CCEEE--CSCCSSCG-------
T ss_pred             ----CCCEEEECCCccc-----------------h----hhHHHHHHHHHHhCC----ccEEe--ccccccCc-------
Confidence                5899999998632                 1    123444444444320    14776  34333211       


Q ss_pred             cccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCcc--------c-hhHHHHHHHH
Q 019722          190 LGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRER--------E-GFITDLVFFL  260 (336)
Q Consensus       190 ~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~--------~-~~~~~~~~~~  260 (336)
                      +.    .....+....| .+|.+++.+++.       .+  ++++.|+||++.++.....        . .........-
T Consensus       119 ~~----~~~~~p~~~~y-~sK~~~e~~~~~-------~~--~~~~~lrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (321)
T 3c1o_A          119 DR----IKPLPPFESVL-EKKRIIRRAIEA-------AA--LPYTYVSANCFGAYFVNYLLHPSPHPNRNDDIVIYGTGE  184 (321)
T ss_dssp             GG----CCCCHHHHHHH-HHHHHHHHHHHH-------HT--CCBEEEECCEEHHHHHHHHHCCCSSCCTTSCEEEETTSC
T ss_pred             cc----cccCCCcchHH-HHHHHHHHHHHH-------cC--CCeEEEEeceeccccccccccccccccccCceEEecCCC
Confidence            00    00002235679 999999988763       24  7888889998865421100        0 0000000000


Q ss_pred             HHhhcCChHHHHHHHHHHHhcCccccCCceeeccCcc-cccccCCCCHHHHHHHHHHHHHhhccCC
Q 019722          261 TSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNE-AWTSKLGSNSNEASRLWAASELLVSRDP  325 (336)
Q Consensus       261 ~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~-~~~~~~~~~~~~~~~~w~~~~~~~~~~~  325 (336)
                      .......++|++..++.++..+..   .|+.+...+. ...+-        +++.+.+.+.+|+..
T Consensus       185 ~~~~~i~~~Dva~~~~~~l~~~~~---~g~~~~~~g~~~~~t~--------~e~~~~~~~~~g~~~  239 (321)
T 3c1o_A          185 TKFVLNYEEDIAKYTIKVACDPRC---CNRIVIYRPPKNIISQ--------NELISLWEAKSGLSF  239 (321)
T ss_dssp             CEEEEECHHHHHHHHHHHHHCGGG---TTEEEECCCGGGEEEH--------HHHHHHHHHHHTSCC
T ss_pred             cceeEeeHHHHHHHHHHHHhCccc---cCeEEEEeCCCCcccH--------HHHHHHHHHHcCCcc
Confidence            011234678999999999985532   3665555542 33332        445555555555443

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=99.58  E-value=8.6e-15  Score=132.89  Aligned_cols=231  Identities=11%  Similarity=0.051  Sum_probs=139.1

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCCh-----HHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           35 SVTAIITGATSGIGAETARVLAKRGARLVLPARSL-----KAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        35 gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~-----~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      .++++||||+|+||.+++++|+++|++|++++|+.     ++.+. .+.+.    ..++.++++|++|++++.++++   
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~-~~~~~----~~~~~~~~~D~~d~~~l~~~~~---   75 (313)
T 1qyd_A            4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQM-LLYFK----QLGAKLIEASLDDHQRLVDALK---   75 (313)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHH-HHHHH----TTTCEEECCCSSCHHHHHHHHT---
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHH-HHHHH----hCCeEEEeCCCCCHHHHHHHHh---
Confidence            46799999999999999999999999999999984     33322 22232    3468899999999999888775   


Q ss_pred             hcCCCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcccc
Q 019722          110 SLNLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRY  189 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~  189 (336)
                          ++|+|||+++.....             .|+.+...+++++    ++.+    .-+++|+  |..+...  .    
T Consensus        76 ----~~d~vi~~a~~~~~~-------------~~~~~~~~l~~aa----~~~g----~v~~~v~--S~~g~~~--~----  122 (313)
T 1qyd_A           76 ----QVDVVISALAGGVLS-------------HHILEQLKLVEAI----KEAG----NIKRFLP--SEFGMDP--D----  122 (313)
T ss_dssp             ----TCSEEEECCCCSSSS-------------TTTTTHHHHHHHH----HHSC----CCSEEEC--SCCSSCT--T----
T ss_pred             ----CCCEEEECCccccch-------------hhHHHHHHHHHHH----HhcC----CCceEEe--cCCcCCc--c----
Confidence                689999999975321             1444444444443    3321    0247774  4333211  0    


Q ss_pred             cccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchh------HHHHHHHH---
Q 019722          190 LGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGF------ITDLVFFL---  260 (336)
Q Consensus       190 ~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~------~~~~~~~~---  260 (336)
                       ..   .....+....| .+|.+++.+.+.       .+  ++++.|+||++.+++.......      ........   
T Consensus       123 -~~---~~~~~p~~~~y-~sK~~~e~~~~~-------~g--~~~~ilrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  188 (313)
T 1qyd_A          123 -IM---EHALQPGSITF-IDKRKVRRAIEA-------AS--IPYTYVSSNMFAGYFAGSLAQLDGHMMPPRDKVLIYGDG  188 (313)
T ss_dssp             -SC---CCCCSSTTHHH-HHHHHHHHHHHH-------TT--CCBCEEECCEEHHHHTTTSSCTTCCSSCCSSEECCBTTS
T ss_pred             -cc---ccCCCCCcchH-HHHHHHHHHHHh-------cC--CCeEEEEeceeccccccccccccccccCCCCeEEEeCCC
Confidence             00   00012335578 999998887652       24  8888999998865332111000      00000000   


Q ss_pred             -HHhhcCChHHHHHHHHHHHhcCccccCCceeeccCcc-cccccCCCCHHHHHHHHHHHHHhhccCCCCCCCC
Q 019722          261 -TSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNE-AWTSKLGSNSNEASRLWAASELLVSRDPKSVFDP  331 (336)
Q Consensus       261 -~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~-~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~p  331 (336)
                       .......++|++..++.++..+..   .|+.+...+. ...+.        +++.+.+.+++|+.....+.|
T Consensus       189 ~~~~~~i~~~Dva~~~~~~l~~~~~---~~~~~~~~g~~~~~s~--------~e~~~~~~~~~g~~~~~~~~~  250 (313)
T 1qyd_A          189 NVKGIWVDEDDVGTYTIKSIDDPQT---LNKTMYIRPPMNILSQ--------KEVIQIWERLSEQNLDKIYIS  250 (313)
T ss_dssp             CSEEEEECHHHHHHHHHHHTTCGGG---SSSEEECCCGGGEEEH--------HHHHHHHHHHHTCCCEECCBC
T ss_pred             CceEEEEEHHHHHHHHHHHHhCccc---CCceEEEeCCCCccCH--------HHHHHHHHHhcCCCCceEECC
Confidence             011234678999999999875532   3554444443 33342        566666667776655444333

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=99.57  E-value=3.2e-14  Score=138.42  Aligned_cols=228  Identities=13%  Similarity=0.047  Sum_probs=140.7

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCCC
Q 019722           35 SVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLP  114 (336)
Q Consensus        35 gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  114 (336)
                      ++++|||||+|+||.+++++|+++|++|++++|+..+.                ..+.+|+.+..         .+.+.+
T Consensus       147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~----------------~~v~~d~~~~~---------~~~l~~  201 (516)
T 3oh8_A          147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKP----------------GKRFWDPLNPA---------SDLLDG  201 (516)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCT----------------TCEECCTTSCC---------TTTTTT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCc----------------cceeecccchh---------HHhcCC
Confidence            57899999999999999999999999999999986531                11567776421         233457


Q ss_pred             ccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccccccccc
Q 019722          115 LNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQIS  194 (336)
Q Consensus       115 id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~~~~  194 (336)
                      +|+|||+||..... ..+.+..+..+++|+.++..+++++..   +.+     .+++|++||....-.......+     
T Consensus       202 ~D~Vih~A~~~~~~-~~~~~~~~~~~~~Nv~gt~~ll~a~a~---~~~-----~~r~V~~SS~~vyg~~~~~~~~-----  267 (516)
T 3oh8_A          202 ADVLVHLAGEPIFG-RFNDSHKEAIRESRVLPTKFLAELVAE---STQ-----CTTMISASAVGFYGHDRGDEIL-----  267 (516)
T ss_dssp             CSEEEECCCC------CCGGGHHHHHHHTHHHHHHHHHHHHH---CSS-----CCEEEEEEEGGGGCSEEEEEEE-----
T ss_pred             CCEEEECCCCcccc-ccchhHHHHHHHHHHHHHHHHHHHHHh---cCC-----CCEEEEeCcceEecCCCCCCcc-----
Confidence            99999999975432 345567788999999999999997442   111     3699999996432101111111     


Q ss_pred             CCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHHHHHHHHh-----------
Q 019722          195 RNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSK-----------  263 (336)
Q Consensus       195 ~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~-----------  263 (336)
                      .+.. ..+...|+.+|...+.+.+.    ....|  ++++.|.||.+.++...    ....+...+...           
T Consensus       268 ~E~~-~~~~~~y~~~~~~~E~~~~~----~~~~g--i~~~ilRp~~v~Gp~~~----~~~~~~~~~~~g~~~~~g~g~~~  336 (516)
T 3oh8_A          268 TEES-ESGDDFLAEVCRDWEHATAP----ASDAG--KRVAFIRTGVALSGRGG----MLPLLKTLFSTGLGGKFGDGTSW  336 (516)
T ss_dssp             CTTS-CCCSSHHHHHHHHHHHTTHH----HHHTT--CEEEEEEECEEEBTTBS----HHHHHHHTTC---CCCCTTSCCE
T ss_pred             CCCC-CCCcChHHHHHHHHHHHHHH----HHhCC--CCEEEEEeeEEECCCCC----hHHHHHHHHHhCCCcccCCCCce
Confidence            1111 12345688888887766443    23345  99999999999987632    222222111110           


Q ss_pred             -hcCChHHHHHHHHHHHhcCccccCCceeeccCcccccccCCCCHHHHHHHHHHHHHhhccC
Q 019722          264 -LLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWTSKLGSNSNEASRLWAASELLVSRD  324 (336)
Q Consensus       264 -~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~  324 (336)
                       ....++|+|.+++.++..+.   ..|.+ +..+....+-        .++.+.+.+.++.+
T Consensus       337 ~~~i~v~Dva~ai~~~l~~~~---~~g~~-ni~~~~~~s~--------~el~~~i~~~~g~~  386 (516)
T 3oh8_A          337 FSWIAIDDLTDIYYRAIVDAQ---ISGPI-NAVAPNPVSN--------ADMTKILATSMHRP  386 (516)
T ss_dssp             ECEEEHHHHHHHHHHHHHCTT---CCEEE-EESCSCCEEH--------HHHHHHTTC-----
T ss_pred             EceEeHHHHHHHHHHHHhCcc---cCCcE-EEECCCCCCH--------HHHHHHHHHHhCCC
Confidence             12246889999999998654   24554 4444433332        44555555555543

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=99.55  E-value=1.7e-14  Score=130.56  Aligned_cols=220  Identities=15%  Similarity=0.049  Sum_probs=130.7

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChH------HHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHH
Q 019722           35 SVTAIITGATSGIGAETARVLAKRGARLVLPARSLK------AAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQF  108 (336)
Q Consensus        35 gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~------~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~  108 (336)
                      .++++||||+|+||.+++++|+++|++|+++.|+..      +.+ ..+.+.    ..++.++++|++|++++.++++  
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~-~~~~l~----~~~v~~v~~D~~d~~~l~~~~~--   76 (308)
T 1qyc_A            4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQ-LLESFK----ASGANIVHGSIDDHASLVEAVK--   76 (308)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHH-HHHHHH----TTTCEEECCCTTCHHHHHHHHH--
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHH-HHHHHH----hCCCEEEEeccCCHHHHHHHHc--
Confidence            468999999999999999999999999999999842      222 222232    3468899999999999888876  


Q ss_pred             HhcCCCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccc
Q 019722          109 HSLNLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIR  188 (336)
Q Consensus       109 ~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~  188 (336)
                           ++|+|||+++...                 +.+.    +.+++.+++.+.    -+++|.  |..+...      
T Consensus        77 -----~~d~vi~~a~~~~-----------------~~~~----~~l~~aa~~~g~----v~~~v~--S~~g~~~------  118 (308)
T 1qyc_A           77 -----NVDVVISTVGSLQ-----------------IESQ----VNIIKAIKEVGT----VKRFFP--SEFGNDV------  118 (308)
T ss_dssp             -----TCSEEEECCCGGG-----------------SGGG----HHHHHHHHHHCC----CSEEEC--SCCSSCT------
T ss_pred             -----CCCEEEECCcchh-----------------hhhH----HHHHHHHHhcCC----CceEee--cccccCc------
Confidence                 5899999998531                 1122    334444444320    147763  4332211      


Q ss_pred             ccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhH-----HHHH----HH
Q 019722          189 YLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFI-----TDLV----FF  259 (336)
Q Consensus       189 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~-----~~~~----~~  259 (336)
                       +    ......+....| .+|.+++.+.+.       .+  ++++.++||++.+.+........     ....    ..
T Consensus       119 -~----~~~~~~p~~~~y-~sK~~~e~~~~~-------~~--~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (308)
T 1qyc_A          119 -D----NVHAVEPAKSVF-EVKAKVRRAIEA-------EG--IPYTYVSSNCFAGYFLRSLAQAGLTAPPRDKVVILGDG  183 (308)
T ss_dssp             -T----SCCCCTTHHHHH-HHHHHHHHHHHH-------HT--CCBEEEECCEEHHHHTTTTTCTTCSSCCSSEEEEETTS
T ss_pred             -c----ccccCCcchhHH-HHHHHHHHHHHh-------cC--CCeEEEEeceeccccccccccccccCCCCCceEEecCC
Confidence             0    001113445678 999998887753       24  88888999988654321110000     0000    00


Q ss_pred             HHHhhcCChHHHHHHHHHHHhcCccccCCceeeccCcc-cccccCCCCHHHHHHHHHHHHHhhccCC
Q 019722          260 LTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNE-AWTSKLGSNSNEASRLWAASELLVSRDP  325 (336)
Q Consensus       260 ~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~-~~~~~~~~~~~~~~~~w~~~~~~~~~~~  325 (336)
                      -.......++|++..++.++..+..   .|+.+...+. ...+.        +++.+.+.+++|...
T Consensus       184 ~~~~~~i~~~Dva~~~~~~l~~~~~---~~~~~~~~g~~~~~s~--------~e~~~~~~~~~g~~~  239 (308)
T 1qyc_A          184 NARVVFVKEEDIGTFTIKAVDDPRT---LNKTLYLRLPANTLSL--------NELVALWEKKIDKTL  239 (308)
T ss_dssp             CCEEEEECHHHHHHHHHTTSSCGGG---TTEEEECCCGGGEEEH--------HHHHHHHHHHTTSCC
T ss_pred             CceEEEecHHHHHHHHHHHHhCccc---cCeEEEEeCCCCccCH--------HHHHHHHHHHhCCCC
Confidence            0011234568999999988875432   3555544432 33332        455555555555443

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=99.53  E-value=5.3e-14  Score=128.12  Aligned_cols=198  Identities=13%  Similarity=0.016  Sum_probs=119.6

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCCCc
Q 019722           36 VTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLPL  115 (336)
Q Consensus        36 k~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i  115 (336)
                      ++++||||+|+||.+++++|+++|++|++++|+.+......+++..    ..+.++++|++|++++.++++       ++
T Consensus        12 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~----~~v~~v~~Dl~d~~~l~~a~~-------~~   80 (318)
T 2r6j_A           12 SKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQS----LGAIIVKGELDEHEKLVELMK-------KV   80 (318)
T ss_dssp             CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHH----TTCEEEECCTTCHHHHHHHHT-------TC
T ss_pred             CeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhc----CCCEEEEecCCCHHHHHHHHc-------CC
Confidence            6799999999999999999999999999999987522222233322    368899999999999888775       58


Q ss_pred             cEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcccccccccC
Q 019722          116 NLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISR  195 (336)
Q Consensus       116 d~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~~~~~  195 (336)
                      |+|||+++...                 +.+    .+.+++.+++.+.    -+++|+  |..+...       +    .
T Consensus        81 d~vi~~a~~~~-----------------~~~----~~~l~~aa~~~g~----v~~~v~--S~~g~~~-------~----~  122 (318)
T 2r6j_A           81 DVVISALAFPQ-----------------ILD----QFKILEAIKVAGN----IKRFLP--SDFGVEE-------D----R  122 (318)
T ss_dssp             SEEEECCCGGG-----------------STT----HHHHHHHHHHHCC----CCEEEC--SCCSSCT-------T----T
T ss_pred             CEEEECCchhh-----------------hHH----HHHHHHHHHhcCC----CCEEEe--eccccCc-------c----c
Confidence            99999998531                 112    2344444444320    147763  3332111       0    0


Q ss_pred             CCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCcc------chhHHHHHHHHHHhhcCChH
Q 019722          196 NKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRER------EGFITDLVFFLTSKLLKTIP  269 (336)
Q Consensus       196 ~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~------~~~~~~~~~~~~~~~~~~~~  269 (336)
                      .....+....| .+|.+++.+.+.       .+  +.++.|+||++...+....      ..........-.......++
T Consensus       123 ~~~~~p~~~~y-~sK~~~e~~~~~-------~~--~~~~~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  192 (318)
T 2r6j_A          123 INALPPFEALI-ERKRMIRRAIEE-------AN--IPYTYVSANCFASYFINYLLRPYDPKDEITVYGTGEAKFAMNYEQ  192 (318)
T ss_dssp             CCCCHHHHHHH-HHHHHHHHHHHH-------TT--CCBEEEECCEEHHHHHHHHHCTTCCCSEEEEETTSCCEEEEECHH
T ss_pred             ccCCCCcchhH-HHHHHHHHHHHh-------cC--CCeEEEEcceehhhhhhhhccccCCCCceEEecCCCceeeEeeHH
Confidence            00002234578 999998877753       24  8888899988754321100      00000000000011224578


Q ss_pred             HHHHHHHHHHhcCccccCCceeeccC
Q 019722          270 QGAATTCYVAIHPRLVNVSGKYFADC  295 (336)
Q Consensus       270 ~~a~~~~~l~~~~~~~~~~G~~~~~~  295 (336)
                      |++..++.++..+..   .|+.+...
T Consensus       193 Dva~~~~~~l~~~~~---~~~~~~~~  215 (318)
T 2r6j_A          193 DIGLYTIKVATDPRA---LNRVVIYR  215 (318)
T ss_dssp             HHHHHHHHHTTCGGG---TTEEEECC
T ss_pred             HHHHHHHHHhcCccc---cCeEEEec
Confidence            999999999875432   25544444

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=99.35  E-value=6.3e-11  Score=106.72  Aligned_cols=225  Identities=15%  Similarity=0.068  Sum_probs=131.9

Q ss_pred             EEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCCCcc
Q 019722           37 TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLPLN  116 (336)
Q Consensus        37 ~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id  116 (336)
                      .+|||||||.||++++++|+++|++|+++.|++..              .++   ..|     .+      ..+....+|
T Consensus         2 kILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~--------------~~~---~~~-----~~------~~~~l~~~d   53 (298)
T 4b4o_A            2 RVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGP--------------GRI---TWD-----EL------AASGLPSCD   53 (298)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCT--------------TEE---EHH-----HH------HHHCCCSCS
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCc--------------Cee---ecc-----hh------hHhhccCCC
Confidence            48999999999999999999999999999997531              122   111     11      112345799


Q ss_pred             EEEEcccCCC--CCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccccccccc
Q 019722          117 LLINNAGKFA--HQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQIS  194 (336)
Q Consensus       117 ~lv~nAg~~~--~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~~~~  194 (336)
                      .+||.||...  .....+....+..++.|+.++-.+++++...-.       ...++|+.||. +.+++.....     .
T Consensus        54 ~vihla~~~i~~~~~~~~~~~~~~~~~~~v~~t~~l~~~~~~~~~-------~~~~~i~~Ss~-~vyg~~~~~~-----~  120 (298)
T 4b4o_A           54 AAVNLAGENILNPLRRWNETFQKEVLGSRLETTQLLAKAITKAPQ-------PPKAWVLVTGV-AYYQPSLTAE-----Y  120 (298)
T ss_dssp             EEEECCCCCSSCTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHCSS-------CCSEEEEEEEG-GGSCCCSSCC-----B
T ss_pred             EEEEeccCcccchhhhhhhhhhhhhhhHHHHHHHHHHHHHHHhCC-------CceEEEEEeee-eeecCCCCCc-----c
Confidence            9999998432  223345556667888888887766655433211       12345555554 4444322111     1


Q ss_pred             CCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHHHHHHHHhh----------
Q 019722          195 RNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSKL----------  264 (336)
Q Consensus       195 ~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~----------  264 (336)
                      +++.+......|+..|...+..     ......+  +++..+.||.|..+-..    ....+........          
T Consensus       121 ~E~~p~~~~~~~~~~~~~~e~~-----~~~~~~~--~~~~~~r~~~v~g~~~~----~~~~~~~~~~~~~~~~~g~g~~~  189 (298)
T 4b4o_A          121 DEDSPGGDFDFFSNLVTKWEAA-----ARLPGDS--TRQVVVRSGVVLGRGGG----AMGHMLLPFRLGLGGPIGSGHQF  189 (298)
T ss_dssp             CTTCCCSCSSHHHHHHHHHHHH-----HCCSSSS--SEEEEEEECEEECTTSH----HHHHHHHHHHTTCCCCBTTSCSB
T ss_pred             cccCCccccchhHHHHHHHHHH-----HHhhccC--CceeeeeeeeEEcCCCC----chhHHHHHHhcCCcceecccCce
Confidence            1222233334455555444431     1223334  99999999999987532    2222222221111          


Q ss_pred             --cCChHHHHHHHHHHHhcCccccCCceeeccCcccccccCCCCHHHHHHHHHHHHHhhccCC
Q 019722          265 --LKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWTSKLGSNSNEASRLWAASELLVSRDP  325 (336)
Q Consensus       265 --~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~  325 (336)
                        ....+|.+.++++++.++..   .| .|+.++....+.        +++.+.+.+.++++.
T Consensus       190 ~~~ihv~Dva~a~~~~~~~~~~---~g-~yn~~~~~~~t~--------~e~~~~ia~~lgrp~  240 (298)
T 4b4o_A          190 FPWIHIGDLAGILTHALEANHV---HG-VLNGVAPSSATN--------AEFAQTFGAALGRRA  240 (298)
T ss_dssp             CCEEEHHHHHHHHHHHHHCTTC---CE-EEEESCSCCCBH--------HHHHHHHHHHHTCCC
T ss_pred             eecCcHHHHHHHHHHHHhCCCC---CC-eEEEECCCccCH--------HHHHHHHHHHhCcCC
Confidence              12358899999999886543   45 455555555553        566666777777654

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=99.32  E-value=9.2e-13  Score=118.50  Aligned_cols=108  Identities=19%  Similarity=0.201  Sum_probs=85.4

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHh
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHS  110 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  110 (336)
                      .+++||+++||||+||||+++++.|+++|++|++++|+.++++++.+++...   .++.++.+|+++++++.++++    
T Consensus       115 ~~l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~~~~~---~~~~~~~~D~~~~~~~~~~~~----  187 (287)
T 1lu9_A          115 GSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKR---FKVNVTAAETADDASRAEAVK----  187 (287)
T ss_dssp             SCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHH---HTCCCEEEECCSHHHHHHHTT----
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHHHhc---CCcEEEEecCCCHHHHHHHHH----
Confidence            5689999999999999999999999999999999999999888888777553   246678899999988877665    


Q ss_pred             cCCCccEEEEcccCCCCC---CCCCc-hhhhhHHHHHHhHHH
Q 019722          111 LNLPLNLLINNAGKFAHQ---HAISE-DGIEMTFATNYLGHF  148 (336)
Q Consensus       111 ~~~~id~lv~nAg~~~~~---~~~~~-~~~~~~~~vn~~~~~  148 (336)
                         .+|+||||||.....   .+.+. ++++..+++|+.+++
T Consensus       188 ---~~DvlVn~ag~g~~~~~~~~~~~~~~~~~~~dvn~~~~~  226 (287)
T 1lu9_A          188 ---GAHFVFTAGAIGLELLPQAAWQNESSIEIVADYNAQPPL  226 (287)
T ss_dssp             ---TCSEEEECCCTTCCSBCHHHHTTCTTCCEEEECCCSSSC
T ss_pred             ---hCCEEEECCCccccCCChhHcCchHHHHHHHHhhhhhhH
Confidence               479999999854221   12232 556667777777766

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*

Probab=99.07  E-value=2.1e-10  Score=104.98  Aligned_cols=159  Identities=14%  Similarity=0.028  Sum_probs=103.4

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHCCC-------EEEEeeCCh--HHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHH
Q 019722           36 VTAIITGATSGIGAETARVLAKRGA-------RLVLPARSL--KAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVS  106 (336)
Q Consensus        36 k~~lItGgs~gIG~aia~~L~~~G~-------~V~~~~r~~--~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~  106 (336)
                      .+++||||+|.||.+++..|+++|.       +|+++++++  ++.+.....+...    .+.++ .|+.+...+...+ 
T Consensus         5 mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~~----~~~~~-~di~~~~~~~~a~-   78 (327)
T 1y7t_A            5 VRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDC----AFPLL-AGLEATDDPKVAF-   78 (327)
T ss_dssp             EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTT----TCTTE-EEEEEESCHHHHT-
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccchhhhhhcc----ccccc-CCeEeccChHHHh-
Confidence            3699999999999999999999996       899999875  2333323333321    11122 4665544444333 


Q ss_pred             HHHhcCCCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCc
Q 019722          107 QFHSLNLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDM  186 (336)
Q Consensus       107 ~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~  186 (336)
                            ...|++||.||.....    .+...+.+++|+.+...+++++...-  .     +..+++++|+......+.  
T Consensus        79 ------~~~D~Vih~Ag~~~~~----~~~~~~~~~~Nv~~t~~l~~a~~~~~--~-----~~~~vvv~snp~~~~~~~--  139 (327)
T 1y7t_A           79 ------KDADYALLVGAAPRKA----GMERRDLLQVNGKIFTEQGRALAEVA--K-----KDVKVLVVGNPANTNALI--  139 (327)
T ss_dssp             ------TTCSEEEECCCCCCCT----TCCHHHHHHHHHHHHHHHHHHHHHHS--C-----TTCEEEECSSSHHHHHHH--
T ss_pred             ------CCCCEEEECCCcCCCC----CCCHHHHHHHHHHHHHHHHHHHHhhc--C-----CCeEEEEeCCchhhhHHH--
Confidence                  2689999999975432    13346789999999999888877642  0     135888888865221110  


Q ss_pred             ccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHc
Q 019722          187 IRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLK  225 (336)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~  225 (336)
                         ...   .....++...|+.+|...+.+.+.+++.++
T Consensus       140 ---~~~---~~~~~~p~~~yg~tkl~~er~~~~~a~~~g  172 (327)
T 1y7t_A          140 ---AYK---NAPGLNPRNFTAMTRLDHNRAKAQLAKKTG  172 (327)
T ss_dssp             ---HHH---TCTTSCGGGEEECCHHHHHHHHHHHHHHHT
T ss_pred             ---HHH---HcCCCChhheeccchHHHHHHHHHHHHHhC
Confidence               000   000134445699999999999998887764

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=98.98  E-value=8e-10  Score=94.87  Aligned_cols=79  Identities=18%  Similarity=0.229  Sum_probs=60.5

Q ss_pred             CCCCCEEEEeCC----------------CChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccC
Q 019722           32 NLSSVTAIITGA----------------TSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDL   95 (336)
Q Consensus        32 ~l~gk~~lItGg----------------s~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl   95 (336)
                      +|+||++|||||                |||||+++|++|+++|++|++++++.. ++         . ...+.  .+|+
T Consensus         5 ~l~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~~-l~---------~-~~g~~--~~dv   71 (226)
T 1u7z_A            5 DLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVS-LP---------T-PPFVK--RVDV   71 (226)
T ss_dssp             TTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCC-CC---------C-CTTEE--EEEC
T ss_pred             CCCCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCcc-cc---------c-CCCCe--EEcc
Confidence            589999999999                689999999999999999999987642 10         0 11232  4577


Q ss_pred             CCHHHHHHHHHHHHhcCCCccEEEEcccCCC
Q 019722           96 SSLSSVRNFVSQFHSLNLPLNLLINNAGKFA  126 (336)
Q Consensus        96 ~~~~~v~~~~~~~~~~~~~id~lv~nAg~~~  126 (336)
                      ++..+   +++.+.+.++++|++|+|||+..
T Consensus        72 ~~~~~---~~~~v~~~~~~~Dili~~Aav~d   99 (226)
T 1u7z_A           72 MTALE---MEAAVNASVQQQNIFIGCAAVAD   99 (226)
T ss_dssp             CSHHH---HHHHHHHHGGGCSEEEECCBCCS
T ss_pred             CcHHH---HHHHHHHhcCCCCEEEECCcccC
Confidence            77544   55566666789999999999754

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=98.83  E-value=2.2e-08  Score=76.67  Aligned_cols=74  Identities=15%  Similarity=0.180  Sum_probs=62.1

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCC-CEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcC
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRG-ARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLN  112 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  112 (336)
                      .+++++|+|+ |++|.++++.|+++| ++|++++|++++.+...        ...+.++.+|+++.+++.++++      
T Consensus         4 ~~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~--------~~~~~~~~~d~~~~~~~~~~~~------   68 (118)
T 3ic5_A            4 MRWNICVVGA-GKIGQMIAALLKTSSNYSVTVADHDLAALAVLN--------RMGVATKQVDAKDEAGLAKALG------   68 (118)
T ss_dssp             TCEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH--------TTTCEEEECCTTCHHHHHHHTT------
T ss_pred             CcCeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH--------hCCCcEEEecCCCHHHHHHHHc------
Confidence            3578999999 999999999999999 89999999988766543        2356778999999887776653      


Q ss_pred             CCccEEEEccc
Q 019722          113 LPLNLLINNAG  123 (336)
Q Consensus       113 ~~id~lv~nAg  123 (336)
                       ++|++|++++
T Consensus        69 -~~d~vi~~~~   78 (118)
T 3ic5_A           69 -GFDAVISAAP   78 (118)
T ss_dssp             -TCSEEEECSC
T ss_pred             -CCCEEEECCC
Confidence             6899999996

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=98.78  E-value=3.2e-09  Score=91.37  Aligned_cols=79  Identities=10%  Similarity=0.225  Sum_probs=57.9

Q ss_pred             CCCEEEEeCC----------------CChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCC
Q 019722           34 SSVTAIITGA----------------TSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSS   97 (336)
Q Consensus        34 ~gk~~lItGg----------------s~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~   97 (336)
                      +||++|||||                +|++|.++|++|+++|++|++++|.... .       ... ...+..+  |+. 
T Consensus         2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~-~-------~~~-~~~~~~~--~v~-   69 (232)
T 2gk4_A            2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRAL-K-------PEP-HPNLSIR--EIT-   69 (232)
T ss_dssp             -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSC-C-------CCC-CTTEEEE--ECC-
T ss_pred             CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCccc-c-------ccC-CCCeEEE--EHh-
Confidence            5899999999                7889999999999999999999987531 1       000 1234333  443 


Q ss_pred             HHHHHHHHHHHHhcCCCccEEEEcccCCC
Q 019722           98 LSSVRNFVSQFHSLNLPLNLLINNAGKFA  126 (336)
Q Consensus        98 ~~~v~~~~~~~~~~~~~id~lv~nAg~~~  126 (336)
                        ++..+++.+.+.++++|++|+||++..
T Consensus        70 --s~~em~~~v~~~~~~~Dili~aAAvsD   96 (232)
T 2gk4_A           70 --NTKDLLIEMQERVQDYQVLIHSMAVSD   96 (232)
T ss_dssp             --SHHHHHHHHHHHGGGCSEEEECSBCCS
T ss_pred             --HHHHHHHHHHHhcCCCCEEEEcCcccc
Confidence              555566666666788999999999754

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=98.67  E-value=1.6e-07  Score=88.21  Aligned_cols=82  Identities=18%  Similarity=0.325  Sum_probs=71.1

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHCC---CEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcC
Q 019722           36 VTAIITGATSGIGAETARVLAKRG---ARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLN  112 (336)
Q Consensus        36 k~~lItGgs~gIG~aia~~L~~~G---~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  112 (336)
                      ++++|+|| |+||+++++.|+++|   .+|++++|+.++++++.+++.... +.++.++.+|+++.+++++++++.    
T Consensus         2 ~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~-~~~~~~~~~D~~d~~~l~~~l~~~----   75 (405)
T 4ina_A            2 AKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKG-YGEIDITTVDADSIEELVALINEV----   75 (405)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTT-CCCCEEEECCTTCHHHHHHHHHHH----
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhc-CCceEEEEecCCCHHHHHHHHHhh----
Confidence            57889998 899999999999998   399999999999998888876532 246889999999999999998865    


Q ss_pred             CCccEEEEcccC
Q 019722          113 LPLNLLINNAGK  124 (336)
Q Consensus       113 ~~id~lv~nAg~  124 (336)
                       ++|+||||++.
T Consensus        76 -~~DvVin~ag~   86 (405)
T 4ina_A           76 -KPQIVLNIALP   86 (405)
T ss_dssp             -CCSEEEECSCG
T ss_pred             -CCCEEEECCCc
Confidence             68999999985

>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*

Probab=98.63  E-value=2.1e-08  Score=81.65  Aligned_cols=77  Identities=14%  Similarity=0.246  Sum_probs=63.0

Q ss_pred             ChHHHHHHHHHHHCCCEEEEeeCChHHHH---HHHHHHHhhCCCCceEEEeccCCCH--HHHHHHHHHHHhcCCCccEEE
Q 019722           45 SGIGAETARVLAKRGARLVLPARSLKAAE---EAKARLASDCPGSDIVVLPLDLSSL--SSVRNFVSQFHSLNLPLNLLI  119 (336)
Q Consensus        45 ~gIG~aia~~L~~~G~~V~~~~r~~~~~~---~~~~~l~~~~~~~~~~~~~~Dl~~~--~~v~~~~~~~~~~~~~id~lv  119 (336)
                      +-++.++++.|++.|++|++..|+.....   +..+.+++.  +.++..+++|++++  ++++++++.+.+.+|+ |+||
T Consensus        26 ~~p~~a~a~~La~~Ga~vvi~~r~~~e~~~~~~~~~~~~~~--G~~~~~i~~Dv~~~~~~~v~~~~~~i~~~~G~-dVLV  102 (157)
T 3gxh_A           26 GLPNEQQFSLLKQAGVDVVINLMPDSSKDAHPDEGKLVTQA--GMDYVYIPVDWQNPKVEDVEAFFAAMDQHKGK-DVLV  102 (157)
T ss_dssp             BCCCHHHHHHHHHTTCCEEEECSCTTSTTSCTTHHHHHHHT--TCEEEECCCCTTSCCHHHHHHHHHHHHHTTTS-CEEE
T ss_pred             CCCCHHHHHHHHHcCCCEEEECCCcccccccccHHHHHHHc--CCeEEEecCCCCCCCHHHHHHHHHHHHhcCCC-CEEE
Confidence            45789999999999999999988754332   123344433  67889999999999  9999999999988899 9999


Q ss_pred             EcccC
Q 019722          120 NNAGK  124 (336)
Q Consensus       120 ~nAg~  124 (336)
                      ||||.
T Consensus       103 nnAgg  107 (157)
T 3gxh_A          103 HCLAN  107 (157)
T ss_dssp             ECSBS
T ss_pred             ECCCC
Confidence            99996

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=98.58  E-value=1.5e-07  Score=79.23  Aligned_cols=79  Identities=19%  Similarity=0.223  Sum_probs=58.0

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCC
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNL  113 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  113 (336)
                      .|++++|+||++|||.++++.+...|++|++++|++++.+...    +.  +...   .+|.++.+..+.+.+...  .+
T Consensus        38 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~----~~--g~~~---~~d~~~~~~~~~~~~~~~--~~  106 (198)
T 1pqw_A           38 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLS----RL--GVEY---VGDSRSVDFADEILELTD--GY  106 (198)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH----TT--CCSE---EEETTCSTHHHHHHHHTT--TC
T ss_pred             CCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH----Hc--CCCE---EeeCCcHHHHHHHHHHhC--CC
Confidence            5799999999999999999999999999999999987654332    21  3222   247776655554444332  13


Q ss_pred             CccEEEEccc
Q 019722          114 PLNLLINNAG  123 (336)
Q Consensus       114 ~id~lv~nAg  123 (336)
                      ++|++|+|+|
T Consensus       107 ~~D~vi~~~g  116 (198)
T 1pqw_A          107 GVDVVLNSLA  116 (198)
T ss_dssp             CEEEEEECCC
T ss_pred             CCeEEEECCc
Confidence            6999999997

>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*

Probab=98.56  E-value=3.3e-10  Score=107.44  Aligned_cols=46  Identities=22%  Similarity=0.316  Sum_probs=40.7

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHH
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKA   77 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~   77 (336)
                      .++.||+++|||++ +||+++|+.|+..|++|+++++++..+.+...
T Consensus       261 ~~L~GKtVvVtGaG-gIG~aiA~~Laa~GA~Viv~D~~~~~a~~Aa~  306 (488)
T 3ond_A          261 VMIAGKVAVVAGYG-DVGKGCAAALKQAGARVIVTEIDPICALQATM  306 (488)
T ss_dssp             CCCTTCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred             CcccCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH
Confidence            46899999999987 99999999999999999999999877665443

>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5

Probab=98.53  E-value=5.3e-08  Score=87.27  Aligned_cols=83  Identities=19%  Similarity=0.199  Sum_probs=62.2

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHh
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHS  110 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  110 (336)
                      .++++|+++|||++ |+|+++++.|+++| +|++++|+.++++++.+++..... ... .+.+|+++.          .+
T Consensus       124 ~~l~~k~vlV~GaG-giG~aia~~L~~~G-~V~v~~r~~~~~~~l~~~~~~~~~-~~~-~~~~d~~~~----------~~  189 (287)
T 1nvt_A          124 GRVKDKNIVIYGAG-GAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLN-KKF-GEEVKFSGL----------DV  189 (287)
T ss_dssp             CCCCSCEEEEECCS-HHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHT-CCH-HHHEEEECT----------TC
T ss_pred             CCcCCCEEEEECch-HHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHhhhcc-ccc-ceeEEEeeH----------HH
Confidence            36889999999987 99999999999999 999999999988888777654210 010 123344441          34


Q ss_pred             cCCCccEEEEcccCCCC
Q 019722          111 LNLPLNLLINNAGKFAH  127 (336)
Q Consensus       111 ~~~~id~lv~nAg~~~~  127 (336)
                      .++++|++|+|+|....
T Consensus       190 ~~~~~DilVn~ag~~~~  206 (287)
T 1nvt_A          190 DLDGVDIIINATPIGMY  206 (287)
T ss_dssp             CCTTCCEEEECSCTTCT
T ss_pred             hhCCCCEEEECCCCCCC
Confidence            56789999999997543

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=98.53  E-value=2.3e-07  Score=88.28  Aligned_cols=79  Identities=18%  Similarity=0.285  Sum_probs=62.9

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcC
Q 019722           33 LSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLN  112 (336)
Q Consensus        33 l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  112 (336)
                      |++|+++|+| +|++|+++++.|++.|++|++++|+.++++++.+    ..  ..+..+.+|+++.+++.++++      
T Consensus         1 M~~k~VlViG-aG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~----~~--~~~~~~~~Dv~d~~~l~~~l~------   67 (450)
T 1ff9_A            1 MATKSVLMLG-SGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSA----GV--QHSTPISLDVNDDAALDAEVA------   67 (450)
T ss_dssp             -CCCEEEEEC-CSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTTT----TC--TTEEEEECCTTCHHHHHHHHT------
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHH----hc--CCceEEEeecCCHHHHHHHHc------
Confidence            4578999997 8999999999999999999999999876654332    21  247788999999988877663      


Q ss_pred             CCccEEEEcccCC
Q 019722          113 LPLNLLINNAGKF  125 (336)
Q Consensus       113 ~~id~lv~nAg~~  125 (336)
                       ++|+||||++..
T Consensus        68 -~~DvVIn~a~~~   79 (450)
T 1ff9_A           68 -KHDLVISLIPYT   79 (450)
T ss_dssp             -TSSEEEECCC--
T ss_pred             -CCcEEEECCccc
Confidence             699999999863

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=98.52  E-value=2.6e-07  Score=84.43  Aligned_cols=79  Identities=15%  Similarity=0.280  Sum_probs=60.4

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCC
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNL  113 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  113 (336)
                      .|+++|||||++|||.++++.+...|++|+++++++++.+.+ +++     +..   ..+|.++.+++.+.+.++..  +
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~-~~~-----g~~---~~~d~~~~~~~~~~~~~~~~--~  213 (333)
T 1v3u_A          145 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYL-KQI-----GFD---AAFNYKTVNSLEEALKKASP--D  213 (333)
T ss_dssp             SSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHT-----TCS---EEEETTSCSCHHHHHHHHCT--T
T ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-Hhc-----CCc---EEEecCCHHHHHHHHHHHhC--C
Confidence            689999999999999999999999999999999998776654 332     222   23477764445555554433  5


Q ss_pred             CccEEEEccc
Q 019722          114 PLNLLINNAG  123 (336)
Q Consensus       114 ~id~lv~nAg  123 (336)
                      ++|++|+|+|
T Consensus       214 ~~d~vi~~~g  223 (333)
T 1v3u_A          214 GYDCYFDNVG  223 (333)
T ss_dssp             CEEEEEESSC
T ss_pred             CCeEEEECCC
Confidence            7999999998

>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*

Probab=98.51  E-value=4.8e-08  Score=94.85  Aligned_cols=98  Identities=20%  Similarity=0.260  Sum_probs=64.3

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHh
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHS  110 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  110 (336)
                      .+++||+++|||| ||+|++++..|+++|++|++++|+.++++++.+++     +.++..    +.+   +       .+
T Consensus       360 ~~l~~k~vlV~Ga-GGig~aia~~L~~~G~~V~i~~R~~~~a~~la~~~-----~~~~~~----~~d---l-------~~  419 (523)
T 2o7s_A          360 SPLASKTVVVIGA-GGAGKALAYGAKEKGAKVVIANRTYERALELAEAI-----GGKALS----LTD---L-------DN  419 (523)
T ss_dssp             ------CEEEECC-SHHHHHHHHHHHHHCC-CEEEESSHHHHHHHHHHT-----TC-CEE----TTT---T-------TT
T ss_pred             cccCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc-----CCceee----HHH---h-------hh
Confidence            3578999999999 59999999999999999999999998887776654     222221    212   1       11


Q ss_pred             -cCCCccEEEEcccCCCC-------CCCCCchhhhhHHHHHHhHHH
Q 019722          111 -LNLPLNLLINNAGKFAH-------QHAISEDGIEMTFATNYLGHF  148 (336)
Q Consensus       111 -~~~~id~lv~nAg~~~~-------~~~~~~~~~~~~~~vn~~~~~  148 (336)
                       ....+|++|||+|+...       ..+.+.+.+...+++|+.+..
T Consensus       420 ~~~~~~DilVN~agvg~~~~~~~~~~~~~~~~~~~~v~Dvny~p~~  465 (523)
T 2o7s_A          420 YHPEDGMVLANTTSMGMQPNVEETPISKDALKHYALVFDAVYTPRI  465 (523)
T ss_dssp             C--CCSEEEEECSSTTCTTCTTCCSSCTTTGGGEEEEEECCCSSSS
T ss_pred             ccccCceEEEECCCCCCCCCCCCCCCChHHcCcCcEEEEEeeCCcc
Confidence             11358999999996432       123445667788899987653

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=98.50  E-value=1.7e-07  Score=87.01  Aligned_cols=109  Identities=19%  Similarity=0.259  Sum_probs=75.4

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      .+.+.+++++|+|+ |+||+++++.|...|++|++++|++++++...+.+     +..   +.+|.++.+++.++++   
T Consensus       161 ~~~l~~~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~-----g~~---~~~~~~~~~~l~~~~~---  228 (369)
T 2eez_A          161 VPGVAPASVVILGG-GTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVF-----GGR---VITLTATEANIKKSVQ---  228 (369)
T ss_dssp             BTBBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT-----TTS---EEEEECCHHHHHHHHH---
T ss_pred             CCCCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhc-----Cce---EEEecCCHHHHHHHHh---
Confidence            45688999999999 99999999999999999999999988776544322     223   4567777777766654   


Q ss_pred             hcCCCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCc
Q 019722          110 SLNLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSI  178 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~  178 (336)
                          ..|++|+|++.....   +              +..+.+..++.|++       +++||++++..
T Consensus       229 ----~~DvVi~~~g~~~~~---~--------------~~li~~~~l~~mk~-------gg~iV~v~~~~  269 (369)
T 2eez_A          229 ----HADLLIGAVLVPGAK---A--------------PKLVTRDMLSLMKE-------GAVIVDVAVDQ  269 (369)
T ss_dssp             ----HCSEEEECCC------------------------CCSCHHHHTTSCT-------TCEEEECC---
T ss_pred             ----CCCEEEECCCCCccc---c--------------chhHHHHHHHhhcC-------CCEEEEEecCC
Confidence                579999999864210   0              12234555566643       47999999854

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=98.42  E-value=2.5e-06  Score=77.05  Aligned_cols=85  Identities=16%  Similarity=0.210  Sum_probs=66.3

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCC---hHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGA-RLVLPARS---LKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFV  105 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~-~V~~~~r~---~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~  105 (336)
                      ..+++||+++|+|+ ||+|++++..|++.|+ +|+++.|+   .++++++.+++.... +..+.  ..++.+.+++...+
T Consensus       149 ~~~l~gk~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~-~~~~~--~~~~~~~~~l~~~l  224 (315)
T 3tnl_A          149 GHDIIGKKMTICGA-GGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKT-DCKAQ--LFDIEDHEQLRKEI  224 (315)
T ss_dssp             TCCCTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHS-SCEEE--EEETTCHHHHHHHH
T ss_pred             CCCccCCEEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhc-CCceE--EeccchHHHHHhhh
Confidence            35789999999997 7999999999999999 89999999   888888888887653 23333  34666665555444


Q ss_pred             HHHHhcCCCccEEEEcccCC
Q 019722          106 SQFHSLNLPLNLLINNAGKF  125 (336)
Q Consensus       106 ~~~~~~~~~id~lv~nAg~~  125 (336)
                      .       ..|+|||+....
T Consensus       225 ~-------~aDiIINaTp~G  237 (315)
T 3tnl_A          225 A-------ESVIFTNATGVG  237 (315)
T ss_dssp             H-------TCSEEEECSSTT
T ss_pred             c-------CCCEEEECccCC
Confidence            3       579999987643

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=98.35  E-value=1.2e-06  Score=83.51  Aligned_cols=81  Identities=14%  Similarity=0.159  Sum_probs=63.1

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHC-CCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKR-GARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQF  108 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~  108 (336)
                      ..++++++++|+|+ |++|++++..|++. |++|++++|+.++++++.+.       ..+.++.+|+++.+++..+++  
T Consensus        18 ~~~l~~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~-------~~~~~~~~D~~d~~~l~~~l~--   87 (467)
T 2axq_A           18 EGRHMGKNVLLLGS-GFVAQPVIDTLAANDDINVTVACRTLANAQALAKP-------SGSKAISLDVTDDSALDKVLA--   87 (467)
T ss_dssp             -----CEEEEEECC-STTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGG-------GTCEEEECCTTCHHHHHHHHH--
T ss_pred             ccCCCCCEEEEECC-hHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHh-------cCCcEEEEecCCHHHHHHHHc--
Confidence            45688999999997 99999999999998 67999999998877655432       135667899999888777664  


Q ss_pred             HhcCCCccEEEEcccCC
Q 019722          109 HSLNLPLNLLINNAGKF  125 (336)
Q Consensus       109 ~~~~~~id~lv~nAg~~  125 (336)
                           ++|+|||+++..
T Consensus        88 -----~~DvVIn~tp~~   99 (467)
T 2axq_A           88 -----DNDVVISLIPYT   99 (467)
T ss_dssp             -----TSSEEEECSCGG
T ss_pred             -----CCCEEEECCchh
Confidence                 689999999864

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=98.33  E-value=2.5e-06  Score=67.61  Aligned_cols=76  Identities=14%  Similarity=0.128  Sum_probs=59.8

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcC
Q 019722           33 LSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLN  112 (336)
Q Consensus        33 l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  112 (336)
                      +.++.++|+|+ |.+|.++++.|.++|++|++++++++..+...+        ..+.++.+|.++++.+.++      ..
T Consensus         4 ~~~~~v~I~G~-G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~--------~~~~~~~gd~~~~~~l~~~------~~   68 (141)
T 3llv_A            4 NGRYEYIVIGS-EAAGVGLVRELTAAGKKVLAVDKSKEKIELLED--------EGFDAVIADPTDESFYRSL------DL   68 (141)
T ss_dssp             --CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH--------TTCEEEECCTTCHHHHHHS------CC
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHH--------CCCcEEECCCCCHHHHHhC------Cc
Confidence            34578999997 789999999999999999999999887665432        2467788999999877654      23


Q ss_pred             CCccEEEEccc
Q 019722          113 LPLNLLINNAG  123 (336)
Q Consensus       113 ~~id~lv~nAg  123 (336)
                      .+.|++|.+.+
T Consensus        69 ~~~d~vi~~~~   79 (141)
T 3llv_A           69 EGVSAVLITGS   79 (141)
T ss_dssp             TTCSEEEECCS
T ss_pred             ccCCEEEEecC
Confidence            46899998776

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=98.32  E-value=8.8e-07  Score=70.04  Aligned_cols=78  Identities=10%  Similarity=0.104  Sum_probs=57.3

Q ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhc
Q 019722           32 NLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSL  111 (336)
Q Consensus        32 ~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  111 (336)
                      ++++++++|+|+ |++|..+++.|.+.|++|++++++++..+..    ..    ....++.+|.++.+.+.++      .
T Consensus         3 ~~~~~~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~----~~----~~~~~~~~d~~~~~~l~~~------~   67 (144)
T 2hmt_A            3 RIKNKQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAY----AS----YATHAVIANATEENELLSL------G   67 (144)
T ss_dssp             ---CCSEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHTT----TT----TCSEEEECCTTCHHHHHTT------T
T ss_pred             CCcCCcEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH----HH----hCCEEEEeCCCCHHHHHhc------C
Confidence            467788999998 9999999999999999999999997655432    11    2345678899886655432      1


Q ss_pred             CCCccEEEEcccC
Q 019722          112 NLPLNLLINNAGK  124 (336)
Q Consensus       112 ~~~id~lv~nAg~  124 (336)
                      ..+.|++|++++.
T Consensus        68 ~~~~d~vi~~~~~   80 (144)
T 2hmt_A           68 IRNFEYVIVAIGA   80 (144)
T ss_dssp             GGGCSEEEECCCS
T ss_pred             CCCCCEEEECCCC
Confidence            2368999999874

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=98.32  E-value=2.3e-06  Score=78.06  Aligned_cols=80  Identities=18%  Similarity=0.228  Sum_probs=59.6

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCC
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNL  113 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  113 (336)
                      .|++++|+||+||||.++++.+...|++|++++|++++.+.+. ++     +...   .+|.++.+..+.+.+....  .
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~-~~-----g~~~---~~d~~~~~~~~~i~~~~~~--~  213 (333)
T 1wly_A          145 PGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETAR-KL-----GCHH---TINYSTQDFAEVVREITGG--K  213 (333)
T ss_dssp             TTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HH-----TCSE---EEETTTSCHHHHHHHHHTT--C
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-Hc-----CCCE---EEECCCHHHHHHHHHHhCC--C
Confidence            5799999999999999999999999999999999987766443 22     3222   2466665555554443322  3


Q ss_pred             CccEEEEcccC
Q 019722          114 PLNLLINNAGK  124 (336)
Q Consensus       114 ~id~lv~nAg~  124 (336)
                      ++|++|+|+|.
T Consensus       214 ~~d~vi~~~g~  224 (333)
T 1wly_A          214 GVDVVYDSIGK  224 (333)
T ss_dssp             CEEEEEECSCT
T ss_pred             CCeEEEECCcH
Confidence            69999999984

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=98.32  E-value=1.9e-06  Score=78.45  Aligned_cols=79  Identities=14%  Similarity=0.176  Sum_probs=59.1

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCC
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNL  113 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  113 (336)
                      .|+++||+||+||||.++++.+...|++|++++|++++.+.+.+ +     +...   .+|.++.+..+.+.+.+..  .
T Consensus       140 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~-~-----g~~~---~~~~~~~~~~~~~~~~~~~--~  208 (327)
T 1qor_A          140 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALK-A-----GAWQ---VINYREEDLVERLKEITGG--K  208 (327)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHH-H-----TCSE---EEETTTSCHHHHHHHHTTT--C
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-c-----CCCE---EEECCCccHHHHHHHHhCC--C
Confidence            58999999999999999999999999999999999877654432 2     3222   2466665555555443321  3


Q ss_pred             CccEEEEccc
Q 019722          114 PLNLLINNAG  123 (336)
Q Consensus       114 ~id~lv~nAg  123 (336)
                      ++|++|+|+|
T Consensus       209 ~~D~vi~~~g  218 (327)
T 1qor_A          209 KVRVVYDSVG  218 (327)
T ss_dssp             CEEEEEECSC
T ss_pred             CceEEEECCc
Confidence            6999999998

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=98.30  E-value=2e-06  Score=78.99  Aligned_cols=80  Identities=16%  Similarity=0.148  Sum_probs=60.6

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCC
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNL  113 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  113 (336)
                      .|+++||+||+||||.++++.+...|++|++++|++++.+.+ +++     +..   ..+|.++.+++.+.++++...  
T Consensus       169 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~-~~~-----g~~---~~~d~~~~~~~~~~~~~~~~~--  237 (347)
T 2hcy_A          169 AGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELF-RSI-----GGE---VFIDFTKEKDIVGAVLKATDG--  237 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHH-HHT-----TCC---EEEETTTCSCHHHHHHHHHTS--
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHH-HHc-----CCc---eEEecCccHhHHHHHHHHhCC--
Confidence            589999999999999999999999999999999988776432 222     322   224777555566666655443  


Q ss_pred             CccEEEEcccC
Q 019722          114 PLNLLINNAGK  124 (336)
Q Consensus       114 ~id~lv~nAg~  124 (336)
                      ++|++|+|+|.
T Consensus       238 ~~D~vi~~~g~  248 (347)
T 2hcy_A          238 GAHGVINVSVS  248 (347)
T ss_dssp             CEEEEEECSSC
T ss_pred             CCCEEEECCCc
Confidence            79999999983

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=98.26  E-value=1.7e-06  Score=79.31  Aligned_cols=80  Identities=16%  Similarity=0.249  Sum_probs=58.8

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCC
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNL  113 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  113 (336)
                      .|+++||+||+|+||.++++.+...|++|+++++++++.+.+.+++     +...   .+|.++.+++.+.++++..  +
T Consensus       155 ~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~~-----g~~~---~~d~~~~~~~~~~~~~~~~--~  224 (345)
T 2j3h_A          155 EGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKF-----GFDD---AFNYKEESDLTAALKRCFP--N  224 (345)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTS-----CCSE---EEETTSCSCSHHHHHHHCT--T
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc-----CCce---EEecCCHHHHHHHHHHHhC--C
Confidence            6899999999999999999999999999999999987765443222     3222   2366654444444444432  4


Q ss_pred             CccEEEEccc
Q 019722          114 PLNLLINNAG  123 (336)
Q Consensus       114 ~id~lv~nAg  123 (336)
                      ++|++|+|+|
T Consensus       225 ~~d~vi~~~g  234 (345)
T 2j3h_A          225 GIDIYFENVG  234 (345)
T ss_dssp             CEEEEEESSC
T ss_pred             CCcEEEECCC
Confidence            7999999998

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=98.25  E-value=3.5e-06  Score=77.62  Aligned_cols=80  Identities=19%  Similarity=0.244  Sum_probs=59.1

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCC
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNL  113 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  113 (336)
                      .|+++||+||+||||.++++.+...|++|++++|++++.+.+ +++     +..   ..+|.++.+..+.+.+...  ..
T Consensus       162 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~~-----g~~---~~~~~~~~~~~~~~~~~~~--~~  230 (354)
T 2j8z_A          162 AGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMA-EKL-----GAA---AGFNYKKEDFSEATLKFTK--GA  230 (354)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHH-----TCS---EEEETTTSCHHHHHHHHTT--TS
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHc-----CCc---EEEecCChHHHHHHHHHhc--CC
Confidence            589999999999999999999999999999999998877654 333     322   2246665544444433221  13


Q ss_pred             CccEEEEcccC
Q 019722          114 PLNLLINNAGK  124 (336)
Q Consensus       114 ~id~lv~nAg~  124 (336)
                      ++|++|+|+|.
T Consensus       231 ~~d~vi~~~G~  241 (354)
T 2j8z_A          231 GVNLILDCIGG  241 (354)
T ss_dssp             CEEEEEESSCG
T ss_pred             CceEEEECCCc
Confidence            69999999983

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=98.24  E-value=2.2e-06  Score=75.94  Aligned_cols=78  Identities=19%  Similarity=0.261  Sum_probs=59.2

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHh
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHS  110 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  110 (336)
                      .+++||+++|+|+ ||+|++++..|++.|++|++++|+.++++++.+++...  . .+.  ..|+   +++       .+
T Consensus       115 ~~l~~k~vlViGa-Gg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~~--~-~~~--~~~~---~~~-------~~  178 (271)
T 1nyt_A          115 FIRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHT--G-SIQ--ALSM---DEL-------EG  178 (271)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGG--S-SEE--ECCS---GGG-------TT
T ss_pred             cCcCCCEEEEECC-cHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhcc--C-Cee--EecH---HHh-------cc
Confidence            3678999999998 79999999999999999999999999888877766432  1 222  1333   211       11


Q ss_pred             cCCCccEEEEcccCCC
Q 019722          111 LNLPLNLLINNAGKFA  126 (336)
Q Consensus       111 ~~~~id~lv~nAg~~~  126 (336)
                        +.+|++|+|++...
T Consensus       179 --~~~DivVn~t~~~~  192 (271)
T 1nyt_A          179 --HEFDLIINATSSGI  192 (271)
T ss_dssp             --CCCSEEEECCSCGG
T ss_pred             --CCCCEEEECCCCCC
Confidence              58999999999644

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=98.23  E-value=5.1e-06  Score=74.00  Aligned_cols=82  Identities=17%  Similarity=0.271  Sum_probs=63.1

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGA-RLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      .+++||+++|+|+ ||+|++++..|++.|+ +|++++|+.++++++.+++....++.++..+  +..+   +...++   
T Consensus       123 ~~l~~k~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~--~~~~---l~~~l~---  193 (283)
T 3jyo_A          123 PNAKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGV--DARG---IEDVIA---  193 (283)
T ss_dssp             TTCCCSEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEE--CSTT---HHHHHH---
T ss_pred             cCcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEc--CHHH---HHHHHh---
Confidence            4689999999997 8999999999999998 7999999999999998888766544444433  3333   333332   


Q ss_pred             hcCCCccEEEEcccCC
Q 019722          110 SLNLPLNLLINNAGKF  125 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~  125 (336)
                          ..|++||+....
T Consensus       194 ----~~DiVInaTp~G  205 (283)
T 3jyo_A          194 ----AADGVVNATPMG  205 (283)
T ss_dssp             ----HSSEEEECSSTT
T ss_pred             ----cCCEEEECCCCC
Confidence                369999987643

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=98.21  E-value=4e-06  Score=76.50  Aligned_cols=80  Identities=19%  Similarity=0.295  Sum_probs=58.9

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCC
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNL  113 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  113 (336)
                      .|+++||+||+||||.++++.+...|++|+++++++++.+.+.+++     +...   ..|.++.+..+.+.+..   .+
T Consensus       149 ~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~-----g~~~---~~~~~~~~~~~~~~~~~---~~  217 (336)
T 4b7c_A          149 NGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEEL-----GFDG---AIDYKNEDLAAGLKREC---PK  217 (336)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTT-----CCSE---EEETTTSCHHHHHHHHC---TT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc-----CCCE---EEECCCHHHHHHHHHhc---CC
Confidence            6899999999999999999999999999999999988776553332     3222   23565544444433322   24


Q ss_pred             CccEEEEcccC
Q 019722          114 PLNLLINNAGK  124 (336)
Q Consensus       114 ~id~lv~nAg~  124 (336)
                      ++|++|+|+|.
T Consensus       218 ~~d~vi~~~g~  228 (336)
T 4b7c_A          218 GIDVFFDNVGG  228 (336)
T ss_dssp             CEEEEEESSCH
T ss_pred             CceEEEECCCc
Confidence            79999999983

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=98.21  E-value=4.9e-06  Score=76.56  Aligned_cols=79  Identities=10%  Similarity=0.234  Sum_probs=58.1

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCC
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNL  113 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  113 (336)
                      .|++++|+||+||||.++++.+...|++|++++|++++.+. ++++     +..   ..+|.++.+..+.+.+...  ..
T Consensus       170 ~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~-~~~~-----ga~---~~~d~~~~~~~~~~~~~~~--~~  238 (351)
T 1yb5_A          170 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKI-VLQN-----GAH---EVFNHREVNYIDKIKKYVG--EK  238 (351)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHH-HHHT-----TCS---EEEETTSTTHHHHHHHHHC--TT
T ss_pred             CcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHH-HHHc-----CCC---EEEeCCCchHHHHHHHHcC--CC
Confidence            57999999999999999999999999999999999887663 2222     222   2246666554444443321  23


Q ss_pred             CccEEEEccc
Q 019722          114 PLNLLINNAG  123 (336)
Q Consensus       114 ~id~lv~nAg  123 (336)
                      ++|++|+|+|
T Consensus       239 ~~D~vi~~~G  248 (351)
T 1yb5_A          239 GIDIIIEMLA  248 (351)
T ss_dssp             CEEEEEESCH
T ss_pred             CcEEEEECCC
Confidence            7999999998

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=98.20  E-value=3.1e-06  Score=77.92  Aligned_cols=77  Identities=16%  Similarity=0.226  Sum_probs=56.0

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCCC
Q 019722           36 VTAIITGATSGIGAETARVLAKRGA-RLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLP  114 (336)
Q Consensus        36 k~~lItGgs~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  114 (336)
                      +++||+||+||||.++++.+...|+ +|+++++++++.+.+.+++     +..   ..+|.++.+..+.+. +...  ++
T Consensus       162 ~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~-----g~~---~~~d~~~~~~~~~~~-~~~~--~~  230 (357)
T 2zb4_A          162 KTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSEL-----GFD---AAINYKKDNVAEQLR-ESCP--AG  230 (357)
T ss_dssp             CEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTS-----CCS---EEEETTTSCHHHHHH-HHCT--TC
T ss_pred             cEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHc-----CCc---eEEecCchHHHHHHH-HhcC--CC
Confidence            9999999999999999999999999 9999999987765543322     322   234666543333332 2222  27


Q ss_pred             ccEEEEccc
Q 019722          115 LNLLINNAG  123 (336)
Q Consensus       115 id~lv~nAg  123 (336)
                      +|++|+|+|
T Consensus       231 ~d~vi~~~G  239 (357)
T 2zb4_A          231 VDVYFDNVG  239 (357)
T ss_dssp             EEEEEESCC
T ss_pred             CCEEEECCC
Confidence            999999998

>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A

Probab=98.14  E-value=1.6e-05  Score=72.36  Aligned_cols=166  Identities=10%  Similarity=0.014  Sum_probs=99.2

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHCCC-------EEEEeeCC----hHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHH
Q 019722           36 VTAIITGATSGIGAETARVLAKRGA-------RLVLPARS----LKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNF  104 (336)
Q Consensus        36 k~~lItGgs~gIG~aia~~L~~~G~-------~V~~~~r~----~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~  104 (336)
                      .+++||||+|.+|.+++..|+.+|.       .|++++++    .++++.....+....  ..+.   .|+....+....
T Consensus         6 ~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~--~~~~---~~i~~~~~~~~a   80 (329)
T 1b8p_A            6 MRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCA--FPLL---AGMTAHADPMTA   80 (329)
T ss_dssp             EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTT--CTTE---EEEEEESSHHHH
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhc--cccc---CcEEEecCcHHH
Confidence            5799999999999999999999885       79999998    655655455554421  1111   233332333333


Q ss_pred             HHHHHhcCCCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccC
Q 019722          105 VSQFHSLNLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSG  184 (336)
Q Consensus       105 ~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~  184 (336)
                      +       ...|++|+.||..... ..   .-.+.+..|+.....+++.+..+-       ++.+++|++|.+.......
T Consensus        81 l-------~~aD~Vi~~ag~~~~~-g~---~r~dl~~~N~~i~~~i~~~i~~~~-------~p~a~ii~~SNPv~~~t~~  142 (329)
T 1b8p_A           81 F-------KDADVALLVGARPRGP-GM---ERKDLLEANAQIFTVQGKAIDAVA-------SRNIKVLVVGNPANTNAYI  142 (329)
T ss_dssp             T-------TTCSEEEECCCCCCCT-TC---CHHHHHHHHHHHHHHHHHHHHHHS-------CTTCEEEECSSSHHHHHHH
T ss_pred             h-------CCCCEEEEeCCCCCCC-CC---CHHHHHHHHHHHHHHHHHHHHHhc-------CCCeEEEEccCchHHHHHH
Confidence            3       3689999999965432 11   223567778776666666665542       0146999999876432100


Q ss_pred             CcccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEE
Q 019722          185 DMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVT  232 (336)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~  232 (336)
                      - ..+.       ..++....|+.++.--..+.+.++.++.-.-..|+
T Consensus       143 ~-~~~~-------~~~p~~~v~g~t~Ld~~r~~~~la~~lgv~~~~v~  182 (329)
T 1b8p_A          143 A-MKSA-------PSLPAKNFTAMLRLDHNRALSQIAAKTGKPVSSIE  182 (329)
T ss_dssp             H-HHTC-------TTSCGGGEEECCHHHHHHHHHHHHHHHTCCGGGEE
T ss_pred             H-HHHc-------CCCCHHHEEEeecHHHHHHHHHHHHHhCcCHHHce
Confidence            0 0000       00334345677766556677777777653322354

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=98.10  E-value=2.7e-05  Score=70.21  Aligned_cols=84  Identities=18%  Similarity=0.232  Sum_probs=62.9

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCC---hHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHH
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGA-RLVLPARS---LKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVS  106 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~-~V~~~~r~---~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~  106 (336)
                      .+++||+++|+|+ ||.|++++..|++.|+ +|+++.|+   .++++++.+++.... +..+..  .+..+.+.....+.
T Consensus       144 ~~l~gk~~lVlGA-GGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~-~~~v~~--~~~~~l~~~~~~l~  219 (312)
T 3t4e_A          144 FDMRGKTMVLLGA-GGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENT-DCVVTV--TDLADQHAFTEALA  219 (312)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHS-SCEEEE--EETTCHHHHHHHHH
T ss_pred             CCcCCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhcc-CcceEE--echHhhhhhHhhcc
Confidence            5689999999997 8999999999999998 89999999   888888888887653 233333  35555433233222


Q ss_pred             HHHhcCCCccEEEEcccCC
Q 019722          107 QFHSLNLPLNLLINNAGKF  125 (336)
Q Consensus       107 ~~~~~~~~id~lv~nAg~~  125 (336)
                             ..|+|||+....
T Consensus       220 -------~~DiIINaTp~G  231 (312)
T 3t4e_A          220 -------SADILTNGTKVG  231 (312)
T ss_dssp             -------HCSEEEECSSTT
T ss_pred             -------CceEEEECCcCC
Confidence                   469999987654

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=98.08  E-value=1.3e-05  Score=73.45  Aligned_cols=80  Identities=19%  Similarity=0.281  Sum_probs=57.4

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHC-CCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcC
Q 019722           34 SSVTAIITGATSGIGAETARVLAKR-GARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLN  112 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  112 (336)
                      .|+++||+|++++||.++++.+... |++|+++++++++.+.+ +++     +...   .+|.++.+.++.+. ++... 
T Consensus       170 ~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~-~~~-----g~~~---~~~~~~~~~~~~~~-~~~~~-  238 (347)
T 1jvb_A          170 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAA-KRA-----GADY---VINASMQDPLAEIR-RITES-  238 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHH-HHH-----TCSE---EEETTTSCHHHHHH-HHTTT-
T ss_pred             CCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHh-----CCCE---EecCCCccHHHHHH-HHhcC-
Confidence            6899999999999999999999999 99999999998876544 333     3222   23555544333332 22211 


Q ss_pred             CCccEEEEcccC
Q 019722          113 LPLNLLINNAGK  124 (336)
Q Consensus       113 ~~id~lv~nAg~  124 (336)
                      +++|++|+|+|.
T Consensus       239 ~~~d~vi~~~g~  250 (347)
T 1jvb_A          239 KGVDAVIDLNNS  250 (347)
T ss_dssp             SCEEEEEESCCC
T ss_pred             CCceEEEECCCC
Confidence            489999999984

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=98.04  E-value=2.2e-05  Score=72.10  Aligned_cols=79  Identities=22%  Similarity=0.318  Sum_probs=58.7

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCC
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNL  113 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  113 (336)
                      .|+++||+||+|+||.++++.+...|++|+++++++++.+.+. ++     +....   .|.++.+..+.+.+..   .+
T Consensus       167 ~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~l-----Ga~~~---~~~~~~~~~~~~~~~~---~~  234 (353)
T 4dup_A          167 EGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACE-RL-----GAKRG---INYRSEDFAAVIKAET---GQ  234 (353)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HH-----TCSEE---EETTTSCHHHHHHHHH---SS
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-hc-----CCCEE---EeCCchHHHHHHHHHh---CC
Confidence            5789999999999999999999999999999999988776443 33     32222   3555544444444333   34


Q ss_pred             CccEEEEcccC
Q 019722          114 PLNLLINNAGK  124 (336)
Q Consensus       114 ~id~lv~nAg~  124 (336)
                      ++|++|+|+|.
T Consensus       235 g~Dvvid~~g~  245 (353)
T 4dup_A          235 GVDIILDMIGA  245 (353)
T ss_dssp             CEEEEEESCCG
T ss_pred             CceEEEECCCH
Confidence            79999999983

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=98.01  E-value=4.4e-05  Score=61.23  Aligned_cols=78  Identities=18%  Similarity=0.177  Sum_probs=58.7

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCC-hHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcC
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGARLVLPARS-LKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLN  112 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~-~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  112 (336)
                      .++.++|.|+ |.+|..+++.|.+.|++|++++++ ++..+...+..     ...+.++.+|.++++.+.++      ..
T Consensus         2 ~~~~vlI~G~-G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~-----~~~~~~i~gd~~~~~~l~~a------~i   69 (153)
T 1id1_A            2 RKDHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRL-----GDNADVIPGDSNDSSVLKKA------GI   69 (153)
T ss_dssp             CCSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHH-----CTTCEEEESCTTSHHHHHHH------TT
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhh-----cCCCeEEEcCCCCHHHHHHc------Ch
Confidence            4567888885 999999999999999999999998 45444443322     23578899999998876554      12


Q ss_pred             CCccEEEEccc
Q 019722          113 LPLNLLINNAG  123 (336)
Q Consensus       113 ~~id~lv~nAg  123 (336)
                      .+.|.+|.+.+
T Consensus        70 ~~ad~vi~~~~   80 (153)
T 1id1_A           70 DRCRAILALSD   80 (153)
T ss_dssp             TTCSEEEECSS
T ss_pred             hhCCEEEEecC
Confidence            36789988775

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=97.99  E-value=2.6e-05  Score=71.30  Aligned_cols=79  Identities=18%  Similarity=0.290  Sum_probs=57.2

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCC
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNL  113 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  113 (336)
                      .|+++||+|++|+||.++++.+...|++|+++++++++.+.+. ++     +...   .+|.++.+..+.+ .++.. ..
T Consensus       166 ~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~-~~-----ga~~---~~d~~~~~~~~~~-~~~~~-~~  234 (343)
T 2eih_A          166 PGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAK-AL-----GADE---TVNYTHPDWPKEV-RRLTG-GK  234 (343)
T ss_dssp             TTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HH-----TCSE---EEETTSTTHHHHH-HHHTT-TT
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-hc-----CCCE---EEcCCcccHHHHH-HHHhC-CC
Confidence            5789999999999999999999999999999999988776543 32     3222   2466655433322 22221 23


Q ss_pred             CccEEEEccc
Q 019722          114 PLNLLINNAG  123 (336)
Q Consensus       114 ~id~lv~nAg  123 (336)
                      ++|++|+|+|
T Consensus       235 ~~d~vi~~~g  244 (343)
T 2eih_A          235 GADKVVDHTG  244 (343)
T ss_dssp             CEEEEEESSC
T ss_pred             CceEEEECCC
Confidence            7999999998

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=97.95  E-value=2.9e-05  Score=70.42  Aligned_cols=80  Identities=19%  Similarity=0.248  Sum_probs=57.6

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCC
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNL  113 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  113 (336)
                      .|+++||+||+|+||.++++.+...|++|+++++++++.+.+. ++     +... +  .|.++.+..+.+.+...  ..
T Consensus       140 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~~-----Ga~~-~--~~~~~~~~~~~~~~~~~--~~  208 (325)
T 3jyn_A          140 PGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAK-AL-----GAWE-T--IDYSHEDVAKRVLELTD--GK  208 (325)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH-HH-----TCSE-E--EETTTSCHHHHHHHHTT--TC
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-Hc-----CCCE-E--EeCCCccHHHHHHHHhC--CC
Confidence            5899999999999999999999999999999999988776443 32     3222 2  35555444444333221  13


Q ss_pred             CccEEEEcccC
Q 019722          114 PLNLLINNAGK  124 (336)
Q Consensus       114 ~id~lv~nAg~  124 (336)
                      ++|++|+|+|.
T Consensus       209 g~Dvvid~~g~  219 (325)
T 3jyn_A          209 KCPVVYDGVGQ  219 (325)
T ss_dssp             CEEEEEESSCG
T ss_pred             CceEEEECCCh
Confidence            69999999984

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=97.94  E-value=2.2e-05  Score=71.52  Aligned_cols=80  Identities=16%  Similarity=0.257  Sum_probs=57.0

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCC
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNL  113 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  113 (336)
                      .|+++||+||+|+||.++++.+...|++|+++++++++.+.+ +++     +....   .|..+.+..+.+.+...  ..
T Consensus       148 ~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~~-----ga~~~---~~~~~~~~~~~~~~~~~--~~  216 (334)
T 3qwb_A          148 KGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIA-KEY-----GAEYL---INASKEDILRQVLKFTN--GK  216 (334)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHT-----TCSEE---EETTTSCHHHHHHHHTT--TS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHc-----CCcEE---EeCCCchHHHHHHHHhC--CC
Confidence            589999999999999999999999999999999998876633 332     32222   34544443333333221  23


Q ss_pred             CccEEEEcccC
Q 019722          114 PLNLLINNAGK  124 (336)
Q Consensus       114 ~id~lv~nAg~  124 (336)
                      ++|++|+|+|.
T Consensus       217 g~D~vid~~g~  227 (334)
T 3qwb_A          217 GVDASFDSVGK  227 (334)
T ss_dssp             CEEEEEECCGG
T ss_pred             CceEEEECCCh
Confidence            69999999984

>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*

Probab=97.93  E-value=5.3e-05  Score=67.05  Aligned_cols=78  Identities=21%  Similarity=0.253  Sum_probs=58.5

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHh
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHS  110 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  110 (336)
                      .++++|+++|+|+ ||+|++++..|++.|.+|+++.|+.++++++.+++...  . .+..  +|+   +++.       +
T Consensus       115 ~~~~~~~vlvlGa-Gg~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~~~~~~~--~-~~~~--~~~---~~~~-------~  178 (272)
T 1p77_A          115 WLRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPY--G-NIQA--VSM---DSIP-------L  178 (272)
T ss_dssp             CCCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGG--S-CEEE--EEG---GGCC-------C
T ss_pred             CCcCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcccc--C-CeEE--eeH---HHhc-------c
Confidence            3678999999997 89999999999999999999999999988888776442  1 2322  232   1110       1


Q ss_pred             cCCCccEEEEcccCCC
Q 019722          111 LNLPLNLLINNAGKFA  126 (336)
Q Consensus       111 ~~~~id~lv~nAg~~~  126 (336)
                        +..|++|++++...
T Consensus       179 --~~~DivIn~t~~~~  192 (272)
T 1p77_A          179 --QTYDLVINATSAGL  192 (272)
T ss_dssp             --SCCSEEEECCCC--
T ss_pred             --CCCCEEEECCCCCC
Confidence              47999999998643

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=97.92  E-value=1.7e-05  Score=73.35  Aligned_cols=76  Identities=13%  Similarity=0.194  Sum_probs=54.7

Q ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCCh---HHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHH
Q 019722           32 NLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSL---KAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQF  108 (336)
Q Consensus        32 ~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~---~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~  108 (336)
                      +++|+++||+|+ |+||.++++.+...|++|+++++++   ++.+ .++++     +.  ..+  | .+ +-.+.+.+ .
T Consensus       178 ~~~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~-~~~~~-----ga--~~v--~-~~-~~~~~~~~-~  243 (366)
T 2cdc_A          178 TLNCRKVLVVGT-GPIGVLFTLLFRTYGLEVWMANRREPTEVEQT-VIEET-----KT--NYY--N-SS-NGYDKLKD-S  243 (366)
T ss_dssp             SSTTCEEEEESC-HHHHHHHHHHHHHHTCEEEEEESSCCCHHHHH-HHHHH-----TC--EEE--E-CT-TCSHHHHH-H
T ss_pred             cCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCccchHHHH-HHHHh-----CC--cee--c-hH-HHHHHHHH-h
Confidence            567999999999 9999999999999999999999987   6653 33333     32  222  5 44 22223322 2


Q ss_pred             HhcCCCccEEEEcccC
Q 019722          109 HSLNLPLNLLINNAGK  124 (336)
Q Consensus       109 ~~~~~~id~lv~nAg~  124 (336)
                       .  +++|++|+++|.
T Consensus       244 -~--~~~d~vid~~g~  256 (366)
T 2cdc_A          244 -V--GKFDVIIDATGA  256 (366)
T ss_dssp             -H--CCEEEEEECCCC
T ss_pred             -C--CCCCEEEECCCC
Confidence             2  579999999985

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=97.89  E-value=3.1e-05  Score=70.71  Aligned_cols=80  Identities=23%  Similarity=0.266  Sum_probs=56.9

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCC
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNL  113 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  113 (336)
                      .|+++||+||+++||.++++.+...|++|+++++++++.+.+. ++     +....   .|..+.+..+.+.+...  ..
T Consensus       144 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~l-----ga~~~---~~~~~~~~~~~~~~~~~--~~  212 (340)
T 3gms_A          144 RNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELL-RL-----GAAYV---IDTSTAPLYETVMELTN--GI  212 (340)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHH-HH-----TCSEE---EETTTSCHHHHHHHHTT--TS
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-hC-----CCcEE---EeCCcccHHHHHHHHhC--CC
Confidence            5889999999999999999999999999999999988765443 23     33322   25554443333333221  23


Q ss_pred             CccEEEEcccC
Q 019722          114 PLNLLINNAGK  124 (336)
Q Consensus       114 ~id~lv~nAg~  124 (336)
                      ++|++|+|+|.
T Consensus       213 g~Dvvid~~g~  223 (340)
T 3gms_A          213 GADAAIDSIGG  223 (340)
T ss_dssp             CEEEEEESSCH
T ss_pred             CCcEEEECCCC
Confidence            79999999984

>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A

Probab=97.87  E-value=0.00014  Score=66.15  Aligned_cols=120  Identities=18%  Similarity=0.120  Sum_probs=74.6

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHCC--CEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCC
Q 019722           36 VTAIITGATSGIGAETARVLAKRG--ARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNL  113 (336)
Q Consensus        36 k~~lItGgs~gIG~aia~~L~~~G--~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  113 (336)
                      .+++||||+|.+|.+++..|+++|  .+|++++++++  +.....+.......++..    +.+.++....++       
T Consensus         9 mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~--~~~~~dL~~~~~~~~v~~----~~~t~d~~~al~-------   75 (326)
T 1smk_A            9 FKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNA--PGVTADISHMDTGAVVRG----FLGQQQLEAALT-------   75 (326)
T ss_dssp             EEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSH--HHHHHHHHTSCSSCEEEE----EESHHHHHHHHT-------
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCc--HhHHHHhhcccccceEEE----EeCCCCHHHHcC-------
Confidence            479999999999999999999999  68999998766  222333433211112322    222334444433       


Q ss_pred             CccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccc
Q 019722          114 PLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHS  180 (336)
Q Consensus       114 ~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~  180 (336)
                      ..|++|++||...... .+   -.+.+.+|+.....+++.+...-.        .+.|+++|.+...
T Consensus        76 gaDvVi~~ag~~~~~g-~~---r~dl~~~N~~~~~~i~~~i~~~~p--------~~~viv~SNPv~~  130 (326)
T 1smk_A           76 GMDLIIVPAGVPRKPG-MT---RDDLFKINAGIVKTLCEGIAKCCP--------RAIVNLISNPVNS  130 (326)
T ss_dssp             TCSEEEECCCCCCCSS-CC---CSHHHHHHHHHHHHHHHHHHHHCT--------TSEEEECCSSHHH
T ss_pred             CCCEEEEcCCcCCCCC-CC---HHHHHHHHHHHHHHHHHHHHhhCC--------CeEEEEECCchHH
Confidence            6899999999654321 12   234577888777777766665421        3566665555443

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=97.87  E-value=3.3e-05  Score=73.30  Aligned_cols=85  Identities=18%  Similarity=0.286  Sum_probs=59.5

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEe--ccCC---------CHHHH
Q 019722           33 LSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLP--LDLS---------SLSSV  101 (336)
Q Consensus        33 l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~--~Dl~---------~~~~v  101 (336)
                      -.|+++||+||+|+||.++++.+...|++|+++++++++.+.+ +++     +....+-.  .|+.         +.+++
T Consensus       219 ~~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~-~~l-----Ga~~~i~~~~~~~~~~~~~~~~~~~~~~  292 (447)
T 4a0s_A          219 KQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAV-RAL-----GCDLVINRAELGITDDIADDPRRVVETG  292 (447)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHT-----TCCCEEEHHHHTCCTTGGGCHHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-Hhc-----CCCEEEecccccccccccccccccchhh
Confidence            3689999999999999999999999999999999988876644 222     33322222  2221         12344


Q ss_pred             HHHHHHHHhcC-CCccEEEEccc
Q 019722          102 RNFVSQFHSLN-LPLNLLINNAG  123 (336)
Q Consensus       102 ~~~~~~~~~~~-~~id~lv~nAg  123 (336)
                      ..+.+++.+.. .++|++|+|+|
T Consensus       293 ~~~~~~v~~~~g~g~Dvvid~~G  315 (447)
T 4a0s_A          293 RKLAKLVVEKAGREPDIVFEHTG  315 (447)
T ss_dssp             HHHHHHHHHHHSSCCSEEEECSC
T ss_pred             hHHHHHHHHHhCCCceEEEECCC
Confidence            55555555433 36999999998

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=97.86  E-value=5.6e-05  Score=65.97  Aligned_cols=83  Identities=20%  Similarity=0.320  Sum_probs=66.6

Q ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCCh-------------------HHHHHHHHHHHhhCCCCceEEE
Q 019722           32 NLSSVTAIITGATSGIGAETARVLAKRGA-RLVLPARSL-------------------KAAEEAKARLASDCPGSDIVVL   91 (336)
Q Consensus        32 ~l~gk~~lItGgs~gIG~aia~~L~~~G~-~V~~~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~   91 (336)
                      .+++++++|.| .||+|.++++.|+..|. +|.+++++.                   .+++.+.+.+.+.+|..++..+
T Consensus        28 ~l~~~~VlVvG-~Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~  106 (249)
T 1jw9_B           28 ALKDSRVLIVG-LGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPV  106 (249)
T ss_dssp             HHHHCEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEE
T ss_pred             HHhCCeEEEEe-eCHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEE
Confidence            36778999998 47999999999999997 999999987                   7888888888888777788888


Q ss_pred             eccCCCHHHHHHHHHHHHhcCCCccEEEEccc
Q 019722           92 PLDLSSLSSVRNFVSQFHSLNLPLNLLINNAG  123 (336)
Q Consensus        92 ~~Dl~~~~~v~~~~~~~~~~~~~id~lv~nAg  123 (336)
                      ..++++ +.+..+++       ..|++|.+..
T Consensus       107 ~~~~~~-~~~~~~~~-------~~DvVi~~~d  130 (249)
T 1jw9_B          107 NALLDD-AELAALIA-------EHDLVLDCTD  130 (249)
T ss_dssp             CSCCCH-HHHHHHHH-------TSSEEEECCS
T ss_pred             eccCCH-hHHHHHHh-------CCCEEEEeCC
Confidence            877763 33443332       5799998764

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=97.80  E-value=7.3e-05  Score=69.00  Aligned_cols=78  Identities=19%  Similarity=0.234  Sum_probs=57.7

Q ss_pred             CCCCCCC--EEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHH
Q 019722           30 CPNLSSV--TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQ  107 (336)
Q Consensus        30 ~~~l~gk--~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~  107 (336)
                      ..+++||  .++|.|| |++|+.+++.|++ .++|.+.+++.++++++.         ..+..+.+|++|.+++.++++ 
T Consensus         9 ~~~~~g~~mkilvlGa-G~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~~---------~~~~~~~~d~~d~~~l~~~~~-   76 (365)
T 3abi_A            9 HHHIEGRHMKVLILGA-GNIGRAIAWDLKD-EFDVYIGDVNNENLEKVK---------EFATPLKVDASNFDKLVEVMK-   76 (365)
T ss_dssp             -------CCEEEEECC-SHHHHHHHHHHTT-TSEEEEEESCHHHHHHHT---------TTSEEEECCTTCHHHHHHHHT-
T ss_pred             cccccCCccEEEEECC-CHHHHHHHHHHhc-CCCeEEEEcCHHHHHHHh---------ccCCcEEEecCCHHHHHHHHh-
Confidence            3455555  5888898 9999999999875 579999999987765432         356678899999998888775 


Q ss_pred             HHhcCCCccEEEEcccCC
Q 019722          108 FHSLNLPLNLLINNAGKF  125 (336)
Q Consensus       108 ~~~~~~~id~lv~nAg~~  125 (336)
                            ..|+||++++..
T Consensus        77 ------~~DvVi~~~p~~   88 (365)
T 3abi_A           77 ------EFELVIGALPGF   88 (365)
T ss_dssp             ------TCSEEEECCCGG
T ss_pred             ------CCCEEEEecCCc
Confidence                  579999998743

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=97.80  E-value=7.9e-05  Score=68.09  Aligned_cols=79  Identities=24%  Similarity=0.404  Sum_probs=54.3

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCC
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNL  113 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  113 (336)
                      .|+++||+||+|+||.++++.+...|++|+++++++++.+.+. ++     +... ++  |..  +.+...+.++.. ..
T Consensus       159 ~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~~-----ga~~-v~--~~~--~~~~~~v~~~~~-~~  226 (342)
T 4eye_A          159 AGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVK-SV-----GADI-VL--PLE--EGWAKAVREATG-GA  226 (342)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHH-HH-----TCSE-EE--ESS--TTHHHHHHHHTT-TS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-hc-----CCcE-Ee--cCc--hhHHHHHHHHhC-CC
Confidence            5899999999999999999999999999999999988765433 33     3222 22  333  222222222211 12


Q ss_pred             CccEEEEcccC
Q 019722          114 PLNLLINNAGK  124 (336)
Q Consensus       114 ~id~lv~nAg~  124 (336)
                      ++|++|+|+|.
T Consensus       227 g~Dvvid~~g~  237 (342)
T 4eye_A          227 GVDMVVDPIGG  237 (342)
T ss_dssp             CEEEEEESCC-
T ss_pred             CceEEEECCch
Confidence            69999999984

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=97.79  E-value=0.00012  Score=57.27  Aligned_cols=74  Identities=22%  Similarity=0.301  Sum_probs=55.7

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCCCc
Q 019722           36 VTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLPL  115 (336)
Q Consensus        36 k~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i  115 (336)
                      +.++|+|+ |.+|..+++.|.+.|++|++++|+++..+...+.       ..+.++..|.++++.+...      .....
T Consensus         5 m~i~IiG~-G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~-------~~~~~~~~d~~~~~~l~~~------~~~~~   70 (140)
T 1lss_A            5 MYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAE-------IDALVINGDCTKIKTLEDA------GIEDA   70 (140)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH-------CSSEEEESCTTSHHHHHHT------TTTTC
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHh-------cCcEEEEcCCCCHHHHHHc------CcccC
Confidence            57888886 9999999999999999999999998766544321       1455678898887654321      13468


Q ss_pred             cEEEEccc
Q 019722          116 NLLINNAG  123 (336)
Q Consensus       116 d~lv~nAg  123 (336)
                      |++|.+.+
T Consensus        71 d~vi~~~~   78 (140)
T 1lss_A           71 DMYIAVTG   78 (140)
T ss_dssp             SEEEECCS
T ss_pred             CEEEEeeC
Confidence            99999875

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=97.78  E-value=4.7e-05  Score=68.27  Aligned_cols=79  Identities=18%  Similarity=0.174  Sum_probs=57.5

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGA-RLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      .++.+|+++|+|+ ||+|++++..|++.|+ +|+++.|+.++++++.+++....   . .++     +.+++.       
T Consensus       137 ~~l~~~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~---~-~~~-----~~~~~~-------  199 (297)
T 2egg_A          137 ITLDGKRILVIGA-GGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERR---S-AYF-----SLAEAE-------  199 (297)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSS---C-CEE-----CHHHHH-------
T ss_pred             CCCCCCEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhcc---C-cee-----eHHHHH-------
Confidence            4678999999997 7999999999999998 99999999998887776552210   0 111     122222       


Q ss_pred             hcCCCccEEEEcccCCC
Q 019722          110 SLNLPLNLLINNAGKFA  126 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~  126 (336)
                      +.....|+||++.+...
T Consensus       200 ~~~~~aDivIn~t~~~~  216 (297)
T 2egg_A          200 TRLAEYDIIINTTSVGM  216 (297)
T ss_dssp             HTGGGCSEEEECSCTTC
T ss_pred             hhhccCCEEEECCCCCC
Confidence            22346899999998654

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=97.78  E-value=3.4e-05  Score=62.10  Aligned_cols=83  Identities=12%  Similarity=0.100  Sum_probs=56.5

Q ss_pred             cCCCCC-CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHH
Q 019722           27 TDGCPN-LSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFV  105 (336)
Q Consensus        27 ~~~~~~-l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~  105 (336)
                      +++++. ..++.++|.|+ |.+|..+++.|.+.|++|++++|++++.+.+    +.   ...+.++..|..+++.+... 
T Consensus        10 ~~~~~~~~~~~~v~IiG~-G~iG~~la~~L~~~g~~V~vid~~~~~~~~~----~~---~~g~~~~~~d~~~~~~l~~~-   80 (155)
T 2g1u_A           10 HHHMSKKQKSKYIVIFGC-GRLGSLIANLASSSGHSVVVVDKNEYAFHRL----NS---EFSGFTVVGDAAEFETLKEC-   80 (155)
T ss_dssp             -------CCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGGGGS----CT---TCCSEEEESCTTSHHHHHTT-
T ss_pred             hhhhhcccCCCcEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHH----Hh---cCCCcEEEecCCCHHHHHHc-
Confidence            344555 67889999985 9999999999999999999999998765432    10   12345677888876543321 


Q ss_pred             HHHHhcCCCccEEEEccc
Q 019722          106 SQFHSLNLPLNLLINNAG  123 (336)
Q Consensus       106 ~~~~~~~~~id~lv~nAg  123 (336)
                           .....|++|.+.+
T Consensus        81 -----~~~~ad~Vi~~~~   93 (155)
T 2g1u_A           81 -----GMEKADMVFAFTN   93 (155)
T ss_dssp             -----TGGGCSEEEECSS
T ss_pred             -----CcccCCEEEEEeC
Confidence                 1235799998876

>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*

Probab=97.77  E-value=0.00017  Score=64.22  Aligned_cols=90  Identities=19%  Similarity=0.367  Sum_probs=73.4

Q ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCCh------------------HHHHHHHHHHHhhCCCCceEEEe
Q 019722           32 NLSSVTAIITGATSGIGAETARVLAKRGA-RLVLPARSL------------------KAAEEAKARLASDCPGSDIVVLP   92 (336)
Q Consensus        32 ~l~gk~~lItGgs~gIG~aia~~L~~~G~-~V~~~~r~~------------------~~~~~~~~~l~~~~~~~~~~~~~   92 (336)
                      .+++++|+|.| .||+|.++++.|+..|. ++.+++.+.                  .+++.+.+.+++.+|+.++..+.
T Consensus        33 kL~~~~VlVvG-aGGlGs~va~~La~aGVG~i~lvD~D~Ve~sNL~Rq~~~~~diG~~Ka~aa~~~L~~iNP~v~v~~~~  111 (292)
T 3h8v_A           33 KIRTFAVAIVG-VGGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNINPDVLFEVHN  111 (292)
T ss_dssp             GGGGCEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECCCBC------------CCTTSBHHHHHHHHHHHHCTTSEEEEEC
T ss_pred             HHhCCeEEEEC-cCHHHHHHHHHHHHcCCCEEEEECCCccChhhcccccCChhhcCchHHHHHHHHHHhhCCCcEEEEec
Confidence            46778999998 68999999999999997 999999876                  67888888898888888999999


Q ss_pred             ccCCCHHHHHHHHHHHHhc----CCCccEEEEcc
Q 019722           93 LDLSSLSSVRNFVSQFHSL----NLPLNLLINNA  122 (336)
Q Consensus        93 ~Dl~~~~~v~~~~~~~~~~----~~~id~lv~nA  122 (336)
                      .++++.+.++.+++.+...    ....|+||.+.
T Consensus       112 ~~l~~~~~~~~~~~~~~~~~l~~~~~~DlVid~~  145 (292)
T 3h8v_A          112 YNITTVENFQHFMDRISNGGLEEGKPVDLVLSCV  145 (292)
T ss_dssp             CCTTSHHHHHHHHHHHHHBSSSTTBCCSEEEECC
T ss_pred             ccCCcHHHHHHHhhhhcccccccCCCCCEEEECC
Confidence            9998877777777655321    13689998665

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=97.76  E-value=0.00013  Score=66.90  Aligned_cols=79  Identities=11%  Similarity=0.128  Sum_probs=56.2

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCCC
Q 019722           35 SVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLP  114 (336)
Q Consensus        35 gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  114 (336)
                      ++++||+||+|+||.++++.+...|++|+++++++++.+.+. ++     +... +  .|..+.+..+.+.+....  .+
T Consensus       165 ~~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-~~-----Ga~~-~--~~~~~~~~~~~v~~~~~~--~g  233 (349)
T 3pi7_A          165 EKAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLK-DI-----GAAH-V--LNEKAPDFEATLREVMKA--EQ  233 (349)
T ss_dssp             CSEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHH-HH-----TCSE-E--EETTSTTHHHHHHHHHHH--HC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-Hc-----CCCE-E--EECCcHHHHHHHHHHhcC--CC
Confidence            389999999999999999999999999999999988765443 33     3322 2  244444433433333322  27


Q ss_pred             ccEEEEcccC
Q 019722          115 LNLLINNAGK  124 (336)
Q Consensus       115 id~lv~nAg~  124 (336)
                      +|++|.|+|.
T Consensus       234 ~D~vid~~g~  243 (349)
T 3pi7_A          234 PRIFLDAVTG  243 (349)
T ss_dssp             CCEEEESSCH
T ss_pred             CcEEEECCCC
Confidence            9999999984

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=97.74  E-value=0.0002  Score=63.54  Aligned_cols=76  Identities=16%  Similarity=0.289  Sum_probs=59.2

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGA-RLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      .+++||+++|+|+ ||+|++++..|++.|+ +|+++.|+.++++++.+++...   ..+.....+  +   +        
T Consensus       122 ~~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~---~~~~~~~~~--~---l--------  184 (281)
T 3o8q_A          122 VLLKGATILLIGA-GGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAY---GEVKAQAFE--Q---L--------  184 (281)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGG---SCEEEEEGG--G---C--------
T ss_pred             CCccCCEEEEECc-hHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhcc---CCeeEeeHH--H---h--------
Confidence            5689999999997 7999999999999997 9999999999999888887653   134444321  1   1        


Q ss_pred             hcCCCccEEEEcccCC
Q 019722          110 SLNLPLNLLINNAGKF  125 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~  125 (336)
                        ....|++|++....
T Consensus       185 --~~~aDiIInaTp~g  198 (281)
T 3o8q_A          185 --KQSYDVIINSTSAS  198 (281)
T ss_dssp             --CSCEEEEEECSCCC
T ss_pred             --cCCCCEEEEcCcCC
Confidence              03689999988653

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=97.71  E-value=0.00014  Score=67.36  Aligned_cols=80  Identities=19%  Similarity=0.234  Sum_probs=59.5

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      .+++.|++++|+|+ |+||.++++.+...|++|++++|++++++.+.+.+     +..+.   ++..+..++.+++.   
T Consensus       163 ~~~l~g~~V~ViG~-G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~-----g~~~~---~~~~~~~~l~~~l~---  230 (377)
T 2vhw_A          163 VPGVEPADVVVIGA-GTAGYNAARIANGMGATVTVLDINIDKLRQLDAEF-----CGRIH---TRYSSAYELEGAVK---  230 (377)
T ss_dssp             BTTBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT-----TTSSE---EEECCHHHHHHHHH---
T ss_pred             CCCCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhc-----CCeeE---eccCCHHHHHHHHc---
Confidence            45789999999998 99999999999999999999999988776554332     22322   23344555554443   


Q ss_pred             hcCCCccEEEEcccCC
Q 019722          110 SLNLPLNLLINNAGKF  125 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~  125 (336)
                          ..|++|++++..
T Consensus       231 ----~aDvVi~~~~~p  242 (377)
T 2vhw_A          231 ----RADLVIGAVLVP  242 (377)
T ss_dssp             ----HCSEEEECCCCT
T ss_pred             ----CCCEEEECCCcC
Confidence                579999998853

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=97.71  E-value=0.00014  Score=69.23  Aligned_cols=85  Identities=16%  Similarity=0.279  Sum_probs=61.6

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEe--cc--------CCCHHHHH
Q 019722           33 LSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLP--LD--------LSSLSSVR  102 (336)
Q Consensus        33 l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~--~D--------l~~~~~v~  102 (336)
                      -.|.++||+||+|+||...++.+...|++|+++++++++.+.+ +++     +....+-.  .|        ..+..+++
T Consensus       227 ~~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~~~-~~l-----Ga~~vi~~~~~d~~~~~~~~~~~~~~~~  300 (456)
T 3krt_A          227 KQGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEIC-RAM-----GAEAIIDRNAEGYRFWKDENTQDPKEWK  300 (456)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHH-----TCCEEEETTTTTCCSEEETTEECHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHHHH-Hhh-----CCcEEEecCcCcccccccccccchHHHH
Confidence            3578999999999999999999999999999999988876644 333     33222211  11        23456666


Q ss_pred             HHHHHHHhcC--CCccEEEEccc
Q 019722          103 NFVSQFHSLN--LPLNLLINNAG  123 (336)
Q Consensus       103 ~~~~~~~~~~--~~id~lv~nAg  123 (336)
                      .+.+++.+..  .++|++|.++|
T Consensus       301 ~~~~~i~~~t~g~g~Dvvid~~G  323 (456)
T 3krt_A          301 RFGKRIRELTGGEDIDIVFEHPG  323 (456)
T ss_dssp             HHHHHHHHHHTSCCEEEEEECSC
T ss_pred             HHHHHHHHHhCCCCCcEEEEcCC
Confidence            6667766543  37999999998

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=97.70  E-value=0.0002  Score=65.95  Aligned_cols=79  Identities=19%  Similarity=0.262  Sum_probs=57.7

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHh
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHS  110 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  110 (336)
                      ..+.+++++|+|+ |++|+++++.|...|++|++++|++++++.+.+...     ..+..+   ..+...+.+.+.    
T Consensus       163 ~~l~~~~VlViGa-GgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~-----~~~~~~---~~~~~~~~~~~~----  229 (361)
T 1pjc_A          163 PGVKPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFG-----SRVELL---YSNSAEIETAVA----  229 (361)
T ss_dssp             TTBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG-----GGSEEE---ECCHHHHHHHHH----
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhC-----ceeEee---eCCHHHHHHHHc----
Confidence            3477899999998 999999999999999999999999988776654432     122222   223444433322    


Q ss_pred             cCCCccEEEEcccCC
Q 019722          111 LNLPLNLLINNAGKF  125 (336)
Q Consensus       111 ~~~~id~lv~nAg~~  125 (336)
                         ..|++|++++..
T Consensus       230 ---~~DvVI~~~~~~  241 (361)
T 1pjc_A          230 ---EADLLIGAVLVP  241 (361)
T ss_dssp             ---TCSEEEECCCCT
T ss_pred             ---CCCEEEECCCcC
Confidence               689999999864

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=97.66  E-value=0.00013  Score=67.29  Aligned_cols=78  Identities=17%  Similarity=0.212  Sum_probs=55.0

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCC
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNL  113 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  113 (336)
                      .|+++||+||+|+||.++++.+...|++|+++++++++.+.+. ++     +... +  .|..+.+ +.+.+.+..  .+
T Consensus       163 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~-~~-----Ga~~-~--~~~~~~~-~~~~~~~~~--~~  230 (362)
T 2c0c_A          163 EGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLK-SL-----GCDR-P--INYKTEP-VGTVLKQEY--PE  230 (362)
T ss_dssp             TTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HT-----TCSE-E--EETTTSC-HHHHHHHHC--TT
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHH-Hc-----CCcE-E--EecCChh-HHHHHHHhc--CC
Confidence            5789999999999999999999999999999999987765433 22     3332 2  2444332 222233221  24


Q ss_pred             CccEEEEccc
Q 019722          114 PLNLLINNAG  123 (336)
Q Consensus       114 ~id~lv~nAg  123 (336)
                      ++|++|+|+|
T Consensus       231 g~D~vid~~g  240 (362)
T 2c0c_A          231 GVDVVYESVG  240 (362)
T ss_dssp             CEEEEEECSC
T ss_pred             CCCEEEECCC
Confidence            7999999998

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=97.62  E-value=0.00026  Score=64.48  Aligned_cols=77  Identities=17%  Similarity=0.123  Sum_probs=55.5

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCC
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNL  113 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  113 (336)
                      .|+++||+|+ |+||..+++.+...|++|+.+++++++.+.+. ++     +.. .  .+|.++.+..+.+. ++.   +
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~l-----Ga~-~--~~d~~~~~~~~~~~-~~~---~  229 (339)
T 1rjw_A          164 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAK-EL-----GAD-L--VVNPLKEDAAKFMK-EKV---G  229 (339)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HT-----TCS-E--EECTTTSCHHHHHH-HHH---S
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HC-----CCC-E--EecCCCccHHHHHH-HHh---C
Confidence            5889999999 88999999999999999999999988776442 22     322 1  24665543333332 222   4


Q ss_pred             CccEEEEcccC
Q 019722          114 PLNLLINNAGK  124 (336)
Q Consensus       114 ~id~lv~nAg~  124 (336)
                      ++|++|+++|.
T Consensus       230 ~~d~vid~~g~  240 (339)
T 1rjw_A          230 GVHAAVVTAVS  240 (339)
T ss_dssp             SEEEEEESSCC
T ss_pred             CCCEEEECCCC
Confidence            79999999984

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=97.60  E-value=0.00023  Score=65.01  Aligned_cols=76  Identities=21%  Similarity=0.311  Sum_probs=53.0

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCC
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNL  113 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  113 (336)
                      .|+++||+||+|+||.++++.+...|++|+++ +++++.+.+ +++     +...    +| .+.+..+.+.+.. . ..
T Consensus       150 ~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~~-~~l-----Ga~~----i~-~~~~~~~~~~~~~-~-~~  215 (343)
T 3gaz_A          150 DGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLEYV-RDL-----GATP----ID-ASREPEDYAAEHT-A-GQ  215 (343)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHHH-HHH-----TSEE----EE-TTSCHHHHHHHHH-T-TS
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHHH-HHc-----CCCE----ec-cCCCHHHHHHHHh-c-CC
Confidence            58899999999999999999999999999999 777765433 333     3332    34 3333333333222 1 23


Q ss_pred             CccEEEEccc
Q 019722          114 PLNLLINNAG  123 (336)
Q Consensus       114 ~id~lv~nAg  123 (336)
                      ++|++|.|+|
T Consensus       216 g~D~vid~~g  225 (343)
T 3gaz_A          216 GFDLVYDTLG  225 (343)
T ss_dssp             CEEEEEESSC
T ss_pred             CceEEEECCC
Confidence            6999999998

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=97.60  E-value=0.00026  Score=64.74  Aligned_cols=79  Identities=23%  Similarity=0.311  Sum_probs=54.2

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcC
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGA-RLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLN  112 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  112 (336)
                      .|+++||+|+ |++|.++++.+...|+ +|+++++++++.+.+. ++     +.. .+  .|..+.+-.+.+ .++.. -
T Consensus       167 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~-~~-----Ga~-~~--~~~~~~~~~~~v-~~~~~-g  234 (348)
T 2d8a_A          167 SGKSVLITGA-GPLGLLGIAVAKASGAYPVIVSEPSDFRRELAK-KV-----GAD-YV--INPFEEDVVKEV-MDITD-G  234 (348)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHH-HH-----TCS-EE--ECTTTSCHHHHH-HHHTT-T
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-Hh-----CCC-EE--ECCCCcCHHHHH-HHHcC-C
Confidence            7899999999 9999999999999999 9999999987765432 33     322 12  344443322222 22211 1


Q ss_pred             CCccEEEEcccC
Q 019722          113 LPLNLLINNAGK  124 (336)
Q Consensus       113 ~~id~lv~nAg~  124 (336)
                      .++|++|.++|.
T Consensus       235 ~g~D~vid~~g~  246 (348)
T 2d8a_A          235 NGVDVFLEFSGA  246 (348)
T ss_dssp             SCEEEEEECSCC
T ss_pred             CCCCEEEECCCC
Confidence            269999999984

>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*

Probab=97.59  E-value=0.00061  Score=61.44  Aligned_cols=120  Identities=19%  Similarity=0.128  Sum_probs=75.5

Q ss_pred             EEEEeCCCChHHHHHHHHHHHCCC--EEEEeeC--ChHHHHHHHHHHHhh--CCCCceEEEeccCCCHHHHHHHHHHHHh
Q 019722           37 TAIITGATSGIGAETARVLAKRGA--RLVLPAR--SLKAAEEAKARLASD--CPGSDIVVLPLDLSSLSSVRNFVSQFHS  110 (336)
Q Consensus        37 ~~lItGgs~gIG~aia~~L~~~G~--~V~~~~r--~~~~~~~~~~~l~~~--~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  110 (336)
                      +++||||+|.+|.+++..|+.+|.  .++++++  +.++++.....+...  ..+..+.+...|    +++.+       
T Consensus         2 KI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~----d~l~~-------   70 (313)
T 1hye_A            2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVES----DENLR-------   70 (313)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEE----TTCGG-------
T ss_pred             EEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHHHhHHhcCCCeEEEeCC----cchHH-------
Confidence            589999999999999999999885  6888998  765554433333321  111222332211    01111       


Q ss_pred             cCCCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccc
Q 019722          111 LNLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHS  180 (336)
Q Consensus       111 ~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~  180 (336)
                      .+...|++|+.||......    ..-...+..|+.....+++++..+-         .+.|+++|.+...
T Consensus        71 al~gaD~Vi~~Ag~~~~~g----~~r~dl~~~N~~i~~~i~~~i~~~~---------~~~vlv~SNPv~~  127 (313)
T 1hye_A           71 IIDESDVVIITSGVPRKEG----MSRMDLAKTNAKIVGKYAKKIAEIC---------DTKIFVITNPVDV  127 (313)
T ss_dssp             GGTTCSEEEECCSCCCCTT----CCHHHHHHHHHHHHHHHHHHHHHHC---------CCEEEECSSSHHH
T ss_pred             HhCCCCEEEECCCCCCCCC----CcHHHHHHHHHHHHHHHHHHHHHhC---------CeEEEEecCcHHH
Confidence            2337899999999754321    1224568888888877777776653         2577777776544

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=97.54  E-value=0.00038  Score=63.60  Aligned_cols=78  Identities=21%  Similarity=0.261  Sum_probs=55.1

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCC
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNL  113 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  113 (336)
                      .|+++||+||+|++|.++++.+...|++|+++++++++.+.+.+ +     +... ++  |..+  +..+.++++  ..+
T Consensus       150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~-l-----Ga~~-vi--~~~~--~~~~~~~~~--~~~  216 (346)
T 3fbg_A          150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTKK-M-----GADI-VL--NHKE--SLLNQFKTQ--GIE  216 (346)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHHH-H-----TCSE-EE--CTTS--CHHHHHHHH--TCC
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-c-----CCcE-EE--ECCc--cHHHHHHHh--CCC
Confidence            58999999999999999999999999999999999887654432 3     3222 22  3332  222223333  234


Q ss_pred             CccEEEEcccC
Q 019722          114 PLNLLINNAGK  124 (336)
Q Consensus       114 ~id~lv~nAg~  124 (336)
                      ++|++|.++|.
T Consensus       217 g~Dvv~d~~g~  227 (346)
T 3fbg_A          217 LVDYVFCTFNT  227 (346)
T ss_dssp             CEEEEEESSCH
T ss_pred             CccEEEECCCc
Confidence            79999999883

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=97.53  E-value=0.00014  Score=60.01  Aligned_cols=78  Identities=18%  Similarity=0.105  Sum_probs=58.4

Q ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHC-CCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHh
Q 019722           32 NLSSVTAIITGATSGIGAETARVLAKR-GARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHS  110 (336)
Q Consensus        32 ~l~gk~~lItGgs~gIG~aia~~L~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  110 (336)
                      ++.++.++|.| .|.+|..+++.|.+. |++|+++++++++.+.+.    .    ..+.++.+|.++++.+.++     .
T Consensus        36 ~~~~~~v~IiG-~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~----~----~g~~~~~gd~~~~~~l~~~-----~  101 (183)
T 3c85_A           36 NPGHAQVLILG-MGRIGTGAYDELRARYGKISLGIEIREEAAQQHR----S----EGRNVISGDATDPDFWERI-----L  101 (183)
T ss_dssp             CCTTCSEEEEC-CSHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHH----H----TTCCEEECCTTCHHHHHTB-----C
T ss_pred             CCCCCcEEEEC-CCHHHHHHHHHHHhccCCeEEEEECCHHHHHHHH----H----CCCCEEEcCCCCHHHHHhc-----c
Confidence            46777888888 599999999999999 999999999988765533    1    1355677899887654432     0


Q ss_pred             cCCCccEEEEccc
Q 019722          111 LNLPLNLLINNAG  123 (336)
Q Consensus       111 ~~~~id~lv~nAg  123 (336)
                      .....|++|.+.+
T Consensus       102 ~~~~ad~vi~~~~  114 (183)
T 3c85_A          102 DTGHVKLVLLAMP  114 (183)
T ss_dssp             SCCCCCEEEECCS
T ss_pred             CCCCCCEEEEeCC
Confidence            1346899998765

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=97.49  E-value=0.0006  Score=53.66  Aligned_cols=76  Identities=13%  Similarity=0.083  Sum_probs=57.6

Q ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhc
Q 019722           32 NLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSL  111 (336)
Q Consensus        32 ~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  111 (336)
                      +++ +.++|.|+ |.+|..+++.|.++|++|++++++++..+.+.+        ..+.++.+|.++++.+.++      .
T Consensus         5 ~~~-~~viIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~--------~g~~~i~gd~~~~~~l~~a------~   68 (140)
T 3fwz_A            5 DIC-NHALLVGY-GRVGSLLGEKLLASDIPLVVIETSRTRVDELRE--------RGVRAVLGNAANEEIMQLA------H   68 (140)
T ss_dssp             CCC-SCEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH--------TTCEEEESCTTSHHHHHHT------T
T ss_pred             cCC-CCEEEECc-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH--------cCCCEEECCCCCHHHHHhc------C
Confidence            344 45667775 889999999999999999999999987765432        2567788999998876553      1


Q ss_pred             CCCccEEEEccc
Q 019722          112 NLPLNLLINNAG  123 (336)
Q Consensus       112 ~~~id~lv~nAg  123 (336)
                      ....|++|.+.+
T Consensus        69 i~~ad~vi~~~~   80 (140)
T 3fwz_A           69 LECAKWLILTIP   80 (140)
T ss_dssp             GGGCSEEEECCS
T ss_pred             cccCCEEEEECC
Confidence            125788887765

>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A

Probab=97.45  E-value=0.00039  Score=60.68  Aligned_cols=83  Identities=22%  Similarity=0.364  Sum_probs=64.0

Q ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCCh-------------------HHHHHHHHHHHhhCCCCceEEE
Q 019722           32 NLSSVTAIITGATSGIGAETARVLAKRGA-RLVLPARSL-------------------KAAEEAKARLASDCPGSDIVVL   91 (336)
Q Consensus        32 ~l~gk~~lItGgs~gIG~aia~~L~~~G~-~V~~~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~   91 (336)
                      .+++++|+|.|+ ||+|.++++.|+..|. ++.+++++.                   .+++.+.+.+++.+|+.++..+
T Consensus        25 ~l~~~~VlvvG~-GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~  103 (251)
T 1zud_1           25 KLLDSQVLIIGL-GGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLTAL  103 (251)
T ss_dssp             HHHTCEEEEECC-STTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEE
T ss_pred             HHhcCcEEEEcc-CHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCCCCEEEEE
Confidence            367789999995 7899999999999998 888886542                   6788888888888888888888


Q ss_pred             eccCCCHHHHHHHHHHHHhcCCCccEEEEccc
Q 019722           92 PLDLSSLSSVRNFVSQFHSLNLPLNLLINNAG  123 (336)
Q Consensus        92 ~~Dl~~~~~v~~~~~~~~~~~~~id~lv~nAg  123 (336)
                      ..+++. +.+..+++       ..|+||.+..
T Consensus       104 ~~~~~~-~~~~~~~~-------~~DvVi~~~d  127 (251)
T 1zud_1          104 QQRLTG-EALKDAVA-------RADVVLDCTD  127 (251)
T ss_dssp             CSCCCH-HHHHHHHH-------HCSEEEECCS
T ss_pred             eccCCH-HHHHHHHh-------cCCEEEECCC
Confidence            777753 44444443       4699987753

>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A

Probab=97.45  E-value=0.0017  Score=58.19  Aligned_cols=117  Identities=13%  Similarity=0.012  Sum_probs=71.8

Q ss_pred             EEEEeCCCChHHHHHHHHHHHCCC--EEEEeeC--ChHHHHHHHHHHHhhCC-CCceEEEeccCCCHHHHHHHHHHHHhc
Q 019722           37 TAIITGATSGIGAETARVLAKRGA--RLVLPAR--SLKAAEEAKARLASDCP-GSDIVVLPLDLSSLSSVRNFVSQFHSL  111 (336)
Q Consensus        37 ~~lItGgs~gIG~aia~~L~~~G~--~V~~~~r--~~~~~~~~~~~l~~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~~  111 (336)
                      +++||||+|.+|.+++..|+.+|.  +++++++  ++++++.....+..... ...+.+.. +  +.    +       .
T Consensus         2 KI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~~-~--~~----~-------a   67 (303)
T 1o6z_A            2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQ-G--GY----E-------D   67 (303)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEE-C--CG----G-------G
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEEe-C--CH----H-------H
Confidence            589999999999999999999885  6999999  77665543444433211 12333332 2  11    1       1


Q ss_pred             CCCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCcc
Q 019722          112 NLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIH  179 (336)
Q Consensus       112 ~~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~  179 (336)
                      +...|++|+.||....+. .+   -.+.+..|+.....+++.+..+    .    +.+.|+++|.+..
T Consensus        68 ~~~aDvVi~~ag~~~~~g-~~---r~dl~~~N~~i~~~i~~~i~~~----~----p~~~viv~SNPv~  123 (303)
T 1o6z_A           68 TAGSDVVVITAGIPRQPG-QT---RIDLAGDNAPIMEDIQSSLDEH----N----DDYISLTTSNPVD  123 (303)
T ss_dssp             GTTCSEEEECCCCCCCTT-CC---HHHHHHHHHHHHHHHHHHHHTT----C----SCCEEEECCSSHH
T ss_pred             hCCCCEEEEcCCCCCCCC-CC---HHHHHHHHHHHHHHHHHHHHHH----C----CCcEEEEeCChHH
Confidence            236899999999654321 12   2345777777666666555443    1    1356666555543

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=97.44  E-value=0.00025  Score=63.51  Aligned_cols=73  Identities=14%  Similarity=0.216  Sum_probs=52.6

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCC-HHHHHHHHHHHHhcC
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSS-LSSVRNFVSQFHSLN  112 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~  112 (336)
                      .|++++|+||+|++|.++++.+...|++|+.+++++++.+.+ +++     +... +  .|..+ .+    +.+++    
T Consensus       125 ~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~~-----ga~~-~--~~~~~~~~----~~~~~----  187 (302)
T 1iz0_A          125 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALP-LAL-----GAEE-A--ATYAEVPE----RAKAW----  187 (302)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHH-HHT-----TCSE-E--EEGGGHHH----HHHHT----
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-Hhc-----CCCE-E--EECCcchh----HHHHh----
Confidence            578999999999999999999999999999999988776543 222     3222 2  34443 22    22222    


Q ss_pred             CCccEEEEcccC
Q 019722          113 LPLNLLINNAGK  124 (336)
Q Consensus       113 ~~id~lv~nAg~  124 (336)
                      +++|++|+ +|.
T Consensus       188 ~~~d~vid-~g~  198 (302)
T 1iz0_A          188 GGLDLVLE-VRG  198 (302)
T ss_dssp             TSEEEEEE-CSC
T ss_pred             cCceEEEE-CCH
Confidence            47999999 873

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=97.41  E-value=0.00036  Score=61.62  Aligned_cols=75  Identities=17%  Similarity=0.295  Sum_probs=57.6

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGA-RLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      .+++||+++|+|+ ||+|++++..|++.|+ +|+++.|+.++++++.+++..    ..+....  +.+..          
T Consensus       116 ~~l~~k~~lvlGa-Gg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~----~~~~~~~--~~~l~----------  178 (272)
T 3pwz_A          116 EPLRNRRVLLLGA-GGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDH----SRLRISR--YEALE----------  178 (272)
T ss_dssp             CCCTTSEEEEECC-SHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCC----TTEEEEC--SGGGT----------
T ss_pred             CCccCCEEEEECc-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcc----CCeeEee--HHHhc----------
Confidence            4689999999997 7999999999999996 999999999999888887643    2344432  21111          


Q ss_pred             hcCCCccEEEEcccC
Q 019722          110 SLNLPLNLLINNAGK  124 (336)
Q Consensus       110 ~~~~~id~lv~nAg~  124 (336)
                      .  ...|++||+...
T Consensus       179 ~--~~~DivInaTp~  191 (272)
T 3pwz_A          179 G--QSFDIVVNATSA  191 (272)
T ss_dssp             T--CCCSEEEECSSG
T ss_pred             c--cCCCEEEECCCC
Confidence            1  368999998764

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=97.37  E-value=0.0002  Score=56.73  Aligned_cols=71  Identities=7%  Similarity=0.179  Sum_probs=53.0

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCCC
Q 019722           35 SVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLP  114 (336)
Q Consensus        35 gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  114 (336)
                      +++++|.|+ |++|.++++.|.+.|++|++++|++++.++..+++     +  +...  +..+.   ..+++       .
T Consensus        21 ~~~v~iiG~-G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~-----~--~~~~--~~~~~---~~~~~-------~   80 (144)
T 3oj0_A           21 GNKILLVGN-GMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKY-----E--YEYV--LINDI---DSLIK-------N   80 (144)
T ss_dssp             CCEEEEECC-SHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHH-----T--CEEE--ECSCH---HHHHH-------T
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHh-----C--CceE--eecCH---HHHhc-------C
Confidence            789999995 99999999999999999999999999887766654     2  1211  22232   22332       5


Q ss_pred             ccEEEEcccCC
Q 019722          115 LNLLINNAGKF  125 (336)
Q Consensus       115 id~lv~nAg~~  125 (336)
                      .|++|++.+..
T Consensus        81 ~Divi~at~~~   91 (144)
T 3oj0_A           81 NDVIITATSSK   91 (144)
T ss_dssp             CSEEEECSCCS
T ss_pred             CCEEEEeCCCC
Confidence            79999998754

>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1

Probab=97.33  E-value=0.00013  Score=65.48  Aligned_cols=94  Identities=15%  Similarity=0.134  Sum_probs=59.4

Q ss_pred             CCCCCE-EEEeCCCC-----------------h-HHHHHHHHHHHCCCEEEEeeCChHHHHH---------HHHHHHhhC
Q 019722           32 NLSSVT-AIITGATS-----------------G-IGAETARVLAKRGARLVLPARSLKAAEE---------AKARLASDC   83 (336)
Q Consensus        32 ~l~gk~-~lItGgs~-----------------g-IG~aia~~L~~~G~~V~~~~r~~~~~~~---------~~~~l~~~~   83 (336)
                      ++.||. ||||+|.+                 | .|.++|++++++|+.|+++.+... +..         ..+.++...
T Consensus        33 ~l~gk~~VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~Ga~V~lv~g~~s-l~p~~r~~~~~~~~~~~~~~~  111 (313)
T 1p9o_A           33 GAQGRRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYGVLFLYRARS-AFPYAHRFPPQTWLSALRPSG  111 (313)
T ss_dssp             HHTTCCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTCEEEEEEETTS-CCTTGGGSCHHHHHHHCEECC
T ss_pred             hhcCCeEEEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCCCEEEEEecCCC-cCcchhccCccchhhhhcccc
Confidence            367888 99998865                 6 999999999999999999987532 110         011111000


Q ss_pred             -CCCceEEEeccCCCHHHHHHHHHHH------------------------------HhcCCCccEEEEcccCCC
Q 019722           84 -PGSDIVVLPLDLSSLSSVRNFVSQF------------------------------HSLNLPLNLLINNAGKFA  126 (336)
Q Consensus        84 -~~~~~~~~~~Dl~~~~~v~~~~~~~------------------------------~~~~~~id~lv~nAg~~~  126 (336)
                       .+..+..+.+|+.+..++...+.+.                              .+.++..|++|++|++..
T Consensus       112 ~~~~~~~~i~v~v~sa~~m~~av~~~~~~~~~~~l~~i~f~tv~eyl~~L~~~~~~l~~~~~~di~i~aAAVsD  185 (313)
T 1p9o_A          112 PALSGLLSLEAEENALPGFAEALRSYQEAAAAGTFLVVEFTTLADYLHLLQAAAQALNPLGPSAMFYLAAAVSD  185 (313)
T ss_dssp             C-CCSEEEEEEETTTSTTHHHHHHHHHHHHHHTCEEEEEECBHHHHHHHHHHHHHHHGGGGGGEEEEECSBCCS
T ss_pred             ccccccceeeeccccHHHHHHHHHHHhhhhccccceeeccccHHHHHHHHHHhhHHhhccCCCCEEEECCchhh
Confidence             0123445666666555555544332                              233567999999999753

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=97.31  E-value=0.00069  Score=62.41  Aligned_cols=75  Identities=19%  Similarity=0.244  Sum_probs=54.8

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCC
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNL  113 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  113 (336)
                      .|+++||+|+ |+||..+++.+...|++|+++++++++.+...+++     +... +  .|..+.+.+.       +..+
T Consensus       187 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~l-----Ga~~-v--~~~~~~~~~~-------~~~~  250 (366)
T 1yqd_A          187 PGKHIGIVGL-GGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNF-----GADS-F--LVSRDQEQMQ-------AAAG  250 (366)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTS-----CCSE-E--EETTCHHHHH-------HTTT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc-----CCce-E--EeccCHHHHH-------HhhC
Confidence            6899999996 99999999999999999999999987765543222     3222 2  3555543332       2234


Q ss_pred             CccEEEEcccC
Q 019722          114 PLNLLINNAGK  124 (336)
Q Consensus       114 ~id~lv~nAg~  124 (336)
                      ++|++|.++|.
T Consensus       251 ~~D~vid~~g~  261 (366)
T 1yqd_A          251 TLDGIIDTVSA  261 (366)
T ss_dssp             CEEEEEECCSS
T ss_pred             CCCEEEECCCc
Confidence            79999999985

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=97.29  E-value=0.00074  Score=62.37  Aligned_cols=76  Identities=28%  Similarity=0.417  Sum_probs=51.9

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCC
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNL  113 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  113 (336)
                      .|++++|+||+|+||..+++.+...|++|+.+++ +++.+. ++++     +... +  .|..+.+..+    ++.+ .+
T Consensus       183 ~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~~-~~~~~~-~~~l-----Ga~~-v--~~~~~~~~~~----~~~~-~~  247 (375)
T 2vn8_A          183 TGKRVLILGASGGVGTFAIQVMKAWDAHVTAVCS-QDASEL-VRKL-----GADD-V--IDYKSGSVEE----QLKS-LK  247 (375)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC-GGGHHH-HHHT-----TCSE-E--EETTSSCHHH----HHHT-SC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEeC-hHHHHH-HHHc-----CCCE-E--EECCchHHHH----HHhh-cC
Confidence            5889999999999999999999999999998884 444332 2322     3322 2  2444433222    2333 25


Q ss_pred             CccEEEEcccC
Q 019722          114 PLNLLINNAGK  124 (336)
Q Consensus       114 ~id~lv~nAg~  124 (336)
                      ++|++|.++|.
T Consensus       248 g~D~vid~~g~  258 (375)
T 2vn8_A          248 PFDFILDNVGG  258 (375)
T ss_dssp             CBSEEEESSCT
T ss_pred             CCCEEEECCCC
Confidence            79999999984

>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*

Probab=97.27  E-value=0.0035  Score=56.44  Aligned_cols=119  Identities=18%  Similarity=0.154  Sum_probs=71.7

Q ss_pred             EEEEeCCCChHHHHHHHHHHHCC--CEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCCC
Q 019722           37 TAIITGATSGIGAETARVLAKRG--ARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLP  114 (336)
Q Consensus        37 ~~lItGgs~gIG~aia~~L~~~G--~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  114 (336)
                      .+.|+||+|.+|..++..|+.+|  .+|+++++++  .+.....+.......++.....    .++.+..++       .
T Consensus         2 KI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~--~~~~a~dL~~~~~~~~l~~~~~----t~d~~~a~~-------~   68 (314)
T 1mld_A            2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH--TPGVAADLSHIETRATVKGYLG----PEQLPDCLK-------G   68 (314)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS--HHHHHHHHTTSSSSCEEEEEES----GGGHHHHHT-------T
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCc--cHHHHHHHhccCcCceEEEecC----CCCHHHHhC-------C
Confidence            57899999999999999999998  5899999987  3333344443211122332210    122333332       6


Q ss_pred             ccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccc
Q 019722          115 LNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHS  180 (336)
Q Consensus       115 id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~  180 (336)
                      .|++|+.+|...... .+.   .+.+..|+.....+++    .+.+..    +.+++|++|.+...
T Consensus        69 aDvVvi~ag~~~~~g-~~r---~dl~~~n~~i~~~i~~----~i~~~~----p~a~viv~sNPv~~  122 (314)
T 1mld_A           69 CDVVVIPAGVPRKPG-MTR---DDLFNTNATIVATLTA----ACAQHC----PDAMICIISNPVNS  122 (314)
T ss_dssp             CSEEEECCSCCCCTT-CCG---GGGHHHHHHHHHHHHH----HHHHHC----TTSEEEECSSCHHH
T ss_pred             CCEEEECCCcCCCCC-CcH---HHHHHHHHHHHHHHHH----HHHhhC----CCeEEEEECCCcch
Confidence            899999999754331 121   2345556554444444    444332    25789998877654

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=97.24  E-value=0.0014  Score=61.15  Aligned_cols=73  Identities=19%  Similarity=0.424  Sum_probs=55.1

Q ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHh
Q 019722           32 NLSSVTAIITGATSGIGAETARVLAKRGA-RLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHS  110 (336)
Q Consensus        32 ~l~gk~~lItGgs~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  110 (336)
                      ++.|++++|.|+ |++|..+++.|...|+ +|++++|+.+++++..+++     +..  ++  +.   +++..++.    
T Consensus       164 ~l~g~~VlIiGa-G~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~-----g~~--~~--~~---~~l~~~l~----  226 (404)
T 1gpj_A          164 SLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDL-----GGE--AV--RF---DELVDHLA----  226 (404)
T ss_dssp             CCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHH-----TCE--EC--CG---GGHHHHHH----
T ss_pred             cccCCEEEEECh-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHc-----CCc--ee--cH---HhHHHHhc----
Confidence            578999999997 9999999999999999 9999999998876666554     222  21  22   22333332    


Q ss_pred             cCCCccEEEEcccC
Q 019722          111 LNLPLNLLINNAGK  124 (336)
Q Consensus       111 ~~~~id~lv~nAg~  124 (336)
                         ..|++|.+.+.
T Consensus       227 ---~aDvVi~at~~  237 (404)
T 1gpj_A          227 ---RSDVVVSATAA  237 (404)
T ss_dssp             ---TCSEEEECCSS
T ss_pred             ---CCCEEEEccCC
Confidence               68999999864

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=97.23  E-value=0.001  Score=56.44  Aligned_cols=73  Identities=16%  Similarity=0.109  Sum_probs=57.9

Q ss_pred             EEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCCCcc
Q 019722           37 TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLPLN  116 (336)
Q Consensus        37 ~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id  116 (336)
                      .++|.|+ |.+|.++++.|.++|++|++++++++..++..+.       ..+.++.+|.++++.+.++      .....|
T Consensus         2 ~iiIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~-------~~~~~i~gd~~~~~~l~~a------~i~~ad   67 (218)
T 3l4b_C            2 KVIIIGG-ETTAYYLARSMLSRKYGVVIINKDRELCEEFAKK-------LKATIIHGDGSHKEILRDA------EVSKND   67 (218)
T ss_dssp             CEEEECC-HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHH-------SSSEEEESCTTSHHHHHHH------TCCTTC
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHH-------cCCeEEEcCCCCHHHHHhc------CcccCC
Confidence            4788995 9999999999999999999999998877655432       2467899999998776654      133679


Q ss_pred             EEEEccc
Q 019722          117 LLINNAG  123 (336)
Q Consensus       117 ~lv~nAg  123 (336)
                      ++|.+.+
T Consensus        68 ~vi~~~~   74 (218)
T 3l4b_C           68 VVVILTP   74 (218)
T ss_dssp             EEEECCS
T ss_pred             EEEEecC
Confidence            9987765

>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*

Probab=97.21  E-value=0.0011  Score=60.05  Aligned_cols=63  Identities=21%  Similarity=0.287  Sum_probs=53.2

Q ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCCh-------------------HHHHHHHHHHHhhCCCCceEEE
Q 019722           32 NLSSVTAIITGATSGIGAETARVLAKRGA-RLVLPARSL-------------------KAAEEAKARLASDCPGSDIVVL   91 (336)
Q Consensus        32 ~l~gk~~lItGgs~gIG~aia~~L~~~G~-~V~~~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~   91 (336)
                      .+++++|+|.| .||+|.++++.|+..|. ++.+++++.                   .+++.+.+.+++.+|+.++..+
T Consensus        31 kL~~~~VlIvG-aGGlGs~va~~La~aGVg~ItlvD~D~Ve~SNL~RQ~l~~~~diG~~Ka~aaa~~L~~inP~v~v~~~  109 (340)
T 3rui_A           31 IIKNTKVLLLG-AGTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATGV  109 (340)
T ss_dssp             HHHTCEEEEEC-CSHHHHHHHHHHHHTTCCEEEEECCCBCCTTSTTTSTTCCGGGTTSBHHHHHHHHHHHHCTTCEEEEE
T ss_pred             HHhCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEecCCEeccccccccccCChhhcChHHHHHHHHHHHHhCCCCEEEEE
Confidence            46789999998 68999999999999998 899987653                   5778888888888888888888


Q ss_pred             eccC
Q 019722           92 PLDL   95 (336)
Q Consensus        92 ~~Dl   95 (336)
                      ..++
T Consensus       110 ~~~i  113 (340)
T 3rui_A          110 KLSI  113 (340)
T ss_dssp             CCCC
T ss_pred             eccc
Confidence            7665

>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}

Probab=97.20  E-value=0.0021  Score=58.58  Aligned_cols=122  Identities=15%  Similarity=0.162  Sum_probs=74.7

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCC--EEEEeeCChHHHHHHHHHHHhh-CCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           33 LSSVTAIITGATSGIGAETARVLAKRGA--RLVLPARSLKAAEEAKARLASD-CPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        33 l~gk~~lItGgs~gIG~aia~~L~~~G~--~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      |.++.+.|+|++|.+|..++..++.+|.  +|++++.++++++-....+... ++..++.+.       .+....++   
T Consensus         6 ~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~~~~~~~i~~t-------~d~~~al~---   75 (343)
T 3fi9_A            6 LTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCGFEGLNLTFT-------SDIKEALT---   75 (343)
T ss_dssp             SCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHHCCTTCCCEEE-------SCHHHHHT---
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhCcCCCCceEEc-------CCHHHHhC---
Confidence            4578899999999999999999999994  8999999988777655555543 222223221       11222222   


Q ss_pred             hcCCCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCe-EEEEcCCccc
Q 019722          110 SLNLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGR-IVNVSSSIHS  180 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~gr-IV~vsS~~~~  180 (336)
                          ..|++|.+||....+ ..+   -.+.+..|..    +++.+.+.+.+..    +.+. ++++|.+...
T Consensus        76 ----dADvVvitaG~p~kp-G~~---R~dLl~~N~~----I~~~i~~~i~~~~----p~a~~vlvvsNPvd~  131 (343)
T 3fi9_A           76 ----DAKYIVSSGGAPRKE-GMT---REDLLKGNAE----IAAQLGKDIKSYC----PDCKHVIIIFNPADI  131 (343)
T ss_dssp             ----TEEEEEECCC--------C---HHHHHHHHHH----HHHHHHHHHHHHC----TTCCEEEECSSSHHH
T ss_pred             ----CCCEEEEccCCCCCC-CCC---HHHHHHHHHH----HHHHHHHHHHHhc----cCcEEEEEecCchHH
Confidence                579999999964322 111   2234555543    4555555555543    2464 7788776543

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=97.15  E-value=0.0034  Score=57.57  Aligned_cols=83  Identities=17%  Similarity=0.159  Sum_probs=58.6

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCE-EEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcC
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGAR-LVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLN  112 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~~-V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  112 (336)
                      .|.++||.|+ |++|...++.+...|++ |+++++++++.+.+ +++ .    ..+..+..|-.+.+.+.+.+.++.. -
T Consensus       179 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a-~~l-~----~~~~~~~~~~~~~~~~~~~v~~~t~-g  250 (363)
T 3m6i_A          179 LGDPVLICGA-GPIGLITMLCAKAAGACPLVITDIDEGRLKFA-KEI-C----PEVVTHKVERLSAEESAKKIVESFG-G  250 (363)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEEESCHHHHHHH-HHH-C----TTCEEEECCSCCHHHHHHHHHHHTS-S
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHh-c----hhcccccccccchHHHHHHHHHHhC-C
Confidence            5789999998 99999999999999996 99999998876643 333 2    2444555555455554444433321 2


Q ss_pred             CCccEEEEcccC
Q 019722          113 LPLNLLINNAGK  124 (336)
Q Consensus       113 ~~id~lv~nAg~  124 (336)
                      .++|++|.++|.
T Consensus       251 ~g~Dvvid~~g~  262 (363)
T 3m6i_A          251 IEPAVALECTGV  262 (363)
T ss_dssp             CCCSEEEECSCC
T ss_pred             CCCCEEEECCCC
Confidence            369999999984

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=97.10  E-value=0.0024  Score=58.33  Aligned_cols=81  Identities=27%  Similarity=0.326  Sum_probs=53.7

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCC-HHHHHHHHHHHHh-c
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSS-LSSVRNFVSQFHS-L  111 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~-~  111 (336)
                      .|+++||+|+ |++|..+++.+...|++|+++++++++.+.+. ++     +.. .++  |.++ .+..+.+.+.... .
T Consensus       168 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-~l-----Ga~-~~~--~~~~~~~~~~~i~~~~~~~~  237 (352)
T 1e3j_A          168 LGTTVLVIGA-GPIGLVSVLAAKAYGAFVVCTARSPRRLEVAK-NC-----GAD-VTL--VVDPAKEEESSIIERIRSAI  237 (352)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HT-----TCS-EEE--ECCTTTSCHHHHHHHHHHHS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH-Hh-----CCC-EEE--cCcccccHHHHHHHHhcccc
Confidence            5789999996 99999999998899999999999988765432 22     333 222  3433 2223333322210 0


Q ss_pred             CCCccEEEEcccC
Q 019722          112 NLPLNLLINNAGK  124 (336)
Q Consensus       112 ~~~id~lv~nAg~  124 (336)
                      .+++|++|.++|.
T Consensus       238 g~g~D~vid~~g~  250 (352)
T 1e3j_A          238 GDLPNVTIDCSGN  250 (352)
T ss_dssp             SSCCSEEEECSCC
T ss_pred             CCCCCEEEECCCC
Confidence            2369999999984

>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*

Probab=97.07  E-value=0.0084  Score=54.19  Aligned_cols=120  Identities=13%  Similarity=0.066  Sum_probs=77.0

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC--EEEEeeCChHHHHHHHHHHHhhCCC--CceEEEeccCCCHHHHHHHHHHHH
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGA--RLVLPARSLKAAEEAKARLASDCPG--SDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~--~V~~~~r~~~~~~~~~~~l~~~~~~--~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      ..+.+.|+|+ |.+|.+++..|+..|.  +|+++++++++++.....+....+-  ..+.+...|   .           
T Consensus         4 ~~~kI~ViGa-G~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~---~-----------   68 (326)
T 3pqe_A            4 HVNKVALIGA-GFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGT---Y-----------   68 (326)
T ss_dssp             SCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEEC---G-----------
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeCc---H-----------
Confidence            4567889995 9999999999999996  8999999998887766666543221  233333222   1           


Q ss_pred             hcCCCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccc
Q 019722          110 SLNLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHS  180 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~  180 (336)
                      +.+..-|++|.+||....+ ..+   =.+.+..|..    .++...+.+.+..    +.+.++++|.+...
T Consensus        69 ~a~~~aDvVvi~ag~p~kp-G~~---R~dL~~~N~~----Iv~~i~~~I~~~~----p~a~vlvvtNPvd~  127 (326)
T 3pqe_A           69 EDCKDADIVCICAGANQKP-GET---RLELVEKNLK----IFKGIVSEVMASG----FDGIFLVATNPVDI  127 (326)
T ss_dssp             GGGTTCSEEEECCSCCCCT-TCC---HHHHHHHHHH----HHHHHHHHHHHTT----CCSEEEECSSSHHH
T ss_pred             HHhCCCCEEEEecccCCCC-Ccc---HHHHHHHHHH----HHHHHHHHHHHhc----CCeEEEEcCChHHH
Confidence            1233689999999964322 112   1234555543    4455555555432    25788888887544

>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A

Probab=97.04  E-value=0.00095  Score=61.18  Aligned_cols=82  Identities=18%  Similarity=0.332  Sum_probs=65.9

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCCh-------------------HHHHHHHHHHHhhCCCCceEEEe
Q 019722           33 LSSVTAIITGATSGIGAETARVLAKRGA-RLVLPARSL-------------------KAAEEAKARLASDCPGSDIVVLP   92 (336)
Q Consensus        33 l~gk~~lItGgs~gIG~aia~~L~~~G~-~V~~~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~~   92 (336)
                      +++++|+|.|+ ||+|.++++.|+..|. ++.+++++.                   .+++.+.+.+++.+|..++..+.
T Consensus       116 L~~~~VlvvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~~  194 (353)
T 3h5n_A          116 LKNAKVVILGC-GGIGNHVSVILATSGIGEIILIDNDQIENTNLTRQVLFSEDDVGKNKTEVIKRELLKRNSEISVSEIA  194 (353)
T ss_dssp             HHTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEEE
T ss_pred             HhCCeEEEECC-CHHHHHHHHHHHhCCCCeEEEECCCcCcccccccccCCChHHCCChHHHHHHHHHHHHCCCCeEEEee
Confidence            56889999985 8999999999999997 899998763                   46777888888888888899998


Q ss_pred             ccCCCHHHHHHHHHHHHhcCCCccEEEEccc
Q 019722           93 LDLSSLSSVRNFVSQFHSLNLPLNLLINNAG  123 (336)
Q Consensus        93 ~Dl~~~~~v~~~~~~~~~~~~~id~lv~nAg  123 (336)
                      .+++....+.       + +...|+||.+..
T Consensus       195 ~~i~~~~~~~-------~-~~~~DlVvd~~D  217 (353)
T 3h5n_A          195 LNINDYTDLH-------K-VPEADIWVVSAD  217 (353)
T ss_dssp             CCCCSGGGGG-------G-SCCCSEEEECCC
T ss_pred             cccCchhhhh-------H-hccCCEEEEecC
Confidence            8887665322       2 457899988653

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=97.03  E-value=0.0037  Score=57.38  Aligned_cols=78  Identities=17%  Similarity=0.245  Sum_probs=54.1

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCC
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNL  113 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  113 (336)
                      .|+++||+| +|++|...++.+...|++|+++++++++.+.+ +++     +.... +  | .+...+.+.+.++.. ..
T Consensus       189 ~g~~VlV~G-~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~-~~l-----Ga~~v-i--~-~~~~~~~~~v~~~~~-g~  256 (363)
T 3uog_A          189 AGDRVVVQG-TGGVALFGLQIAKATGAEVIVTSSSREKLDRA-FAL-----GADHG-I--N-RLEEDWVERVYALTG-DR  256 (363)
T ss_dssp             TTCEEEEES-SBHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHH-----TCSEE-E--E-TTTSCHHHHHHHHHT-TC
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEecCchhHHHH-HHc-----CCCEE-E--c-CCcccHHHHHHHHhC-CC
Confidence            578999999 89999999999999999999999998876653 333     33222 2  3 332223333333222 22


Q ss_pred             CccEEEEccc
Q 019722          114 PLNLLINNAG  123 (336)
Q Consensus       114 ~id~lv~nAg  123 (336)
                      ++|++|.++|
T Consensus       257 g~D~vid~~g  266 (363)
T 3uog_A          257 GADHILEIAG  266 (363)
T ss_dssp             CEEEEEEETT
T ss_pred             CceEEEECCC
Confidence            6999999998

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A

Probab=97.01  E-value=0.0017  Score=59.57  Aligned_cols=38  Identities=16%  Similarity=0.069  Sum_probs=33.4

Q ss_pred             CC-CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHH
Q 019722           34 SS-VTAIITGATSGIGAETARVLAKRGARLVLPARSLKA   71 (336)
Q Consensus        34 ~g-k~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~   71 (336)
                      .| .++||+||+|++|...++.+...|++|+++.++.++
T Consensus       166 ~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~  204 (364)
T 1gu7_A          166 PGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPN  204 (364)
T ss_dssp             TTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTT
T ss_pred             CCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCccc
Confidence            47 899999999999999999888899999988876654

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=97.00  E-value=0.00073  Score=61.12  Aligned_cols=75  Identities=21%  Similarity=0.317  Sum_probs=49.2

Q ss_pred             EEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCCCcc
Q 019722           37 TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLPLN  116 (336)
Q Consensus        37 ~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id  116 (336)
                      ++||+||+|++|..+++.+...|++|+.+++++++.+.+ +++     +... +  +|..+.+  ...++++.  .+++|
T Consensus       152 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~-~~l-----Ga~~-~--i~~~~~~--~~~~~~~~--~~~~d  218 (328)
T 1xa0_A          152 PVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYL-RVL-----GAKE-V--LAREDVM--AERIRPLD--KQRWA  218 (328)
T ss_dssp             CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHH-HHT-----TCSE-E--EECC-----------CC--SCCEE
T ss_pred             eEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHH-HHc-----CCcE-E--EecCCcH--HHHHHHhc--CCccc
Confidence            799999999999999999999999999999987766543 222     3322 2  2444332  12222221  24799


Q ss_pred             EEEEcccC
Q 019722          117 LLINNAGK  124 (336)
Q Consensus       117 ~lv~nAg~  124 (336)
                      ++|.++|.
T Consensus       219 ~vid~~g~  226 (328)
T 1xa0_A          219 AAVDPVGG  226 (328)
T ss_dssp             EEEECSTT
T ss_pred             EEEECCcH
Confidence            99999983

>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A

Probab=96.97  E-value=0.0023  Score=62.24  Aligned_cols=63  Identities=21%  Similarity=0.287  Sum_probs=54.0

Q ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCCh-------------------HHHHHHHHHHHhhCCCCceEEE
Q 019722           32 NLSSVTAIITGATSGIGAETARVLAKRGA-RLVLPARSL-------------------KAAEEAKARLASDCPGSDIVVL   91 (336)
Q Consensus        32 ~l~gk~~lItGgs~gIG~aia~~L~~~G~-~V~~~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~   91 (336)
                      .+++++|+|.| .||+|.++++.|+..|. ++.+++++.                   .+++.+.+.+++.+|+.++..+
T Consensus       323 kL~~arVLIVG-aGGLGs~vA~~La~aGVG~ItLvD~D~Ve~SNL~RQ~L~~~~dIG~~KAeaaa~~L~~iNP~V~v~~~  401 (615)
T 4gsl_A          323 IIKNTKVLLLG-AGTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATGV  401 (615)
T ss_dssp             HHHTCEEEEEC-CSHHHHHHHHHHHHTTCCEEEEECCCBCCTTGGGTSTTCCGGGTTSBHHHHHHHHHHHHCTTCEEEEE
T ss_pred             HHhCCeEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCCCcccCcccccCCChhhcChHHHHHHHHHHHhhCCCcEEEEe
Confidence            46889999998 58999999999999998 899998764                   5788888899998888888888


Q ss_pred             eccC
Q 019722           92 PLDL   95 (336)
Q Consensus        92 ~~Dl   95 (336)
                      ..++
T Consensus       402 ~~~I  405 (615)
T 4gsl_A          402 KLSI  405 (615)
T ss_dssp             CCCC
T ss_pred             eccc
Confidence            7665

>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*

Probab=96.96  E-value=0.0088  Score=54.02  Aligned_cols=124  Identities=12%  Similarity=0.169  Sum_probs=73.6

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCC--EEEEeeCChHHHHHHHHHHHhhCC-CCceEEEeccCCCHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGA--RLVLPARSLKAAEEAKARLASDCP-GSDIVVLPLDLSSLSSVRNFVS  106 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~--~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~Dl~~~~~v~~~~~  106 (336)
                      .++..++.+.|+|+ |.+|.+++..|+..|.  +|+++++++++++-....+....+ ...+.+...|            
T Consensus         4 ~~~~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~~~~------------   70 (326)
T 3vku_A            4 ITDKDHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIYSAE------------   70 (326)
T ss_dssp             ---CCCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEECC------------
T ss_pred             cccCCCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEEECc------------
Confidence            45677888999996 9999999999999987  899999999888766666665321 0123333221            


Q ss_pred             HHHhcCCCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccc
Q 019722          107 QFHSLNLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHS  180 (336)
Q Consensus       107 ~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~  180 (336)
                        .+.+...|++|..||....+ ..+.   .+.++.|.    .+++.+.+.+.+..    +.+.++++|.+...
T Consensus        71 --~~a~~~aDiVvi~ag~~~kp-G~tR---~dL~~~N~----~I~~~i~~~i~~~~----p~a~ilvvtNPvdi  130 (326)
T 3vku_A           71 --YSDAKDADLVVITAGAPQKP-GETR---LDLVNKNL----KILKSIVDPIVDSG----FNGIFLVAANPVDI  130 (326)
T ss_dssp             --GGGGTTCSEEEECCCCC------------------------CHHHHHHHHHTTT----CCSEEEECSSSHHH
T ss_pred             --HHHhcCCCEEEECCCCCCCC-CchH---HHHHHHHH----HHHHHHHHHHHhcC----CceEEEEccCchHH
Confidence              11234689999999974322 1121   23344443    34555555665432    35788888876543

>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...

Probab=96.96  E-value=0.03  Score=50.58  Aligned_cols=121  Identities=14%  Similarity=0.151  Sum_probs=78.0

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCC--EEEEeeCChHHHHHHHHHHHhh--CCCCceEEEeccCCCHHHHHHHHHHH
Q 019722           33 LSSVTAIITGATSGIGAETARVLAKRGA--RLVLPARSLKAAEEAKARLASD--CPGSDIVVLPLDLSSLSSVRNFVSQF  108 (336)
Q Consensus        33 l~gk~~lItGgs~gIG~aia~~L~~~G~--~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~~~Dl~~~~~v~~~~~~~  108 (336)
                      ...+.+.|+|+ |.+|.+++..|+.+|.  +|++++++.++++-....+...  ++.. ...+..  .+.+         
T Consensus        17 ~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~~~~~-~~i~~~--~d~~---------   83 (331)
T 4aj2_A           17 VPQNKITVVGV-GAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLKT-PKIVSS--KDYS---------   83 (331)
T ss_dssp             CCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCSC-CEEEEC--SSGG---------
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhhccCC-CeEEEc--CCHH---------
Confidence            34578899997 9999999999999997  8999999998888777777643  2211 122221  1211         


Q ss_pred             HhcCCCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccc
Q 019722          109 HSLNLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHS  180 (336)
Q Consensus       109 ~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~  180 (336)
                        .+..-|++|.+||....+ ..+.   .+.++.|..    +++.+.+.+.+..    +.+.++++|.+...
T Consensus        84 --~~~~aDiVvi~aG~~~kp-G~tR---~dL~~~N~~----I~~~i~~~i~~~~----p~a~vlvvtNPvdi  141 (331)
T 4aj2_A           84 --VTANSKLVIITAGARQQE-GESR---LNLVQRNVN----IFKFIIPNVVKYS----PQCKLLIVSNPVDI  141 (331)
T ss_dssp             --GGTTEEEEEECCSCCCCT-TCCG---GGGHHHHHH----HHHHHHHHHHHHC----TTCEEEECSSSHHH
T ss_pred             --HhCCCCEEEEccCCCCCC-CccH---HHHHHHHHH----HHHHHHHHHHHHC----CCeEEEEecChHHH
Confidence              123689999999975433 2222   234555543    4555555555432    25788888887544

>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*

Probab=96.95  E-value=0.0066  Score=54.84  Aligned_cols=122  Identities=11%  Similarity=0.106  Sum_probs=75.1

Q ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhhC----CCCceEEEeccCCCHHHHHHHHH
Q 019722           32 NLSSVTAIITGATSGIGAETARVLAKRGA-RLVLPARSLKAAEEAKARLASDC----PGSDIVVLPLDLSSLSSVRNFVS  106 (336)
Q Consensus        32 ~l~gk~~lItGgs~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~----~~~~~~~~~~Dl~~~~~v~~~~~  106 (336)
                      .|+.+.+.|+|+ |.+|.+++..|+..|. +|+++++++++++.....+....    .+.++... .|   .        
T Consensus         4 ~m~~~kI~viGa-G~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~t-~d---~--------   70 (324)
T 3gvi_A            4 SMARNKIALIGS-GMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTGA-ND---Y--------   70 (324)
T ss_dssp             --CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEE-SS---G--------
T ss_pred             CCcCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhchhhhcCCCCEEEEe-CC---H--------
Confidence            456678999997 9999999999999998 99999999887764444444321    12233321 12   1        


Q ss_pred             HHHhcCCCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCcccc
Q 019722          107 QFHSLNLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSW  181 (336)
Q Consensus       107 ~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~  181 (336)
                         +.+..-|++|..+|....+. .+.   .+.+..|.    .+++...+.+.+..    +.+.++++|.+....
T Consensus        71 ---~a~~~aDiVIiaag~p~k~G-~~R---~dl~~~N~----~i~~~i~~~i~~~~----p~a~iivvtNPvd~~  130 (324)
T 3gvi_A           71 ---AAIEGADVVIVTAGVPRKPG-MSR---DDLLGINL----KVMEQVGAGIKKYA----PEAFVICITNPLDAM  130 (324)
T ss_dssp             ---GGGTTCSEEEECCSCCCC---------CHHHHHHH----HHHHHHHHHHHHHC----TTCEEEECCSSHHHH
T ss_pred             ---HHHCCCCEEEEccCcCCCCC-CCH---HHHHHhhH----HHHHHHHHHHHHHC----CCeEEEecCCCcHHH
Confidence               11236799999999643321 122   23344443    45555555555542    257888888875443

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*

Probab=96.94  E-value=0.0021  Score=58.36  Aligned_cols=76  Identities=14%  Similarity=0.131  Sum_probs=54.1

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCC
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNL  113 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  113 (336)
                      .|+++||+|+ |++|...++.+...|++|+.+++++++.+.+ +++     +....   .|..+.+..+.+.+    ..+
T Consensus       166 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~-~~l-----Ga~~~---i~~~~~~~~~~~~~----~~g  231 (340)
T 3s2e_A          166 PGQWVVISGI-GGLGHVAVQYARAMGLRVAAVDIDDAKLNLA-RRL-----GAEVA---VNARDTDPAAWLQK----EIG  231 (340)
T ss_dssp             TTSEEEEECC-STTHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHT-----TCSEE---EETTTSCHHHHHHH----HHS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCCHHHHHHH-HHc-----CCCEE---EeCCCcCHHHHHHH----hCC
Confidence            6889999986 8999999999999999999999998876643 222     33222   24444433333333    234


Q ss_pred             CccEEEEccc
Q 019722          114 PLNLLINNAG  123 (336)
Q Consensus       114 ~id~lv~nAg  123 (336)
                      ++|++|.++|
T Consensus       232 ~~d~vid~~g  241 (340)
T 3s2e_A          232 GAHGVLVTAV  241 (340)
T ss_dssp             SEEEEEESSC
T ss_pred             CCCEEEEeCC
Confidence            7999999987

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*

Probab=96.93  E-value=0.0002  Score=63.32  Aligned_cols=43  Identities=21%  Similarity=0.259  Sum_probs=38.2

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHH
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGA-RLVLPARSLKAAEE   74 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~   74 (336)
                      .+++||+++|+|+ ||.|++++..|++.|+ +|+++.|+.+++++
T Consensus       113 ~~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~  156 (277)
T 3don_A          113 EGIEDAYILILGA-GGASKGIANELYKIVRPTLTVANRTMSRFNN  156 (277)
T ss_dssp             TTGGGCCEEEECC-SHHHHHHHHHHHTTCCSCCEEECSCGGGGTT
T ss_pred             CCcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHH
Confidence            4678999999996 7999999999999999 89999999876554

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1

Probab=96.90  E-value=0.0042  Score=56.87  Aligned_cols=78  Identities=21%  Similarity=0.253  Sum_probs=54.0

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHC-CCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcC
Q 019722           34 SSVTAIITGATSGIGAETARVLAKR-GARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLN  112 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  112 (336)
                      .|.++||+|+ |++|...++.+... |++|+.+++++++.+.+. ++     +... +  .|..+.  +...++++.. -
T Consensus       186 ~g~~VlV~Ga-G~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~~~-~l-----Ga~~-v--i~~~~~--~~~~v~~~~~-g  252 (359)
T 1h2b_A          186 PGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAE-RL-----GADH-V--VDARRD--PVKQVMELTR-G  252 (359)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHH-HT-----TCSE-E--EETTSC--HHHHHHHHTT-T
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHH-Hh-----CCCE-E--Eeccch--HHHHHHHHhC-C
Confidence            5789999999 89999999988888 999999999988765442 22     3222 2  244443  3333333321 1


Q ss_pred             CCccEEEEcccC
Q 019722          113 LPLNLLINNAGK  124 (336)
Q Consensus       113 ~~id~lv~nAg~  124 (336)
                      .++|++|.++|.
T Consensus       253 ~g~Dvvid~~G~  264 (359)
T 1h2b_A          253 RGVNVAMDFVGS  264 (359)
T ss_dssp             CCEEEEEESSCC
T ss_pred             CCCcEEEECCCC
Confidence            269999999984

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A

Probab=96.90  E-value=0.0094  Score=54.46  Aligned_cols=79  Identities=27%  Similarity=0.313  Sum_probs=53.0

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCC--CHHHHHHHHHHHHh
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGA-RLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLS--SLSSVRNFVSQFHS  110 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~--~~~~v~~~~~~~~~  110 (336)
                      .|.++||+|+ |++|...++.+...|+ +|+++++++++.+.+. ++     +.. .++  |..  +..+....+.+...
T Consensus       171 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~l-----Ga~-~vi--~~~~~~~~~~~~~i~~~~~  240 (356)
T 1pl8_A          171 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAK-EI-----GAD-LVL--QISKESPQEIARKVEGQLG  240 (356)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH-HT-----TCS-EEE--ECSSCCHHHHHHHHHHHHT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-Hh-----CCC-EEE--cCcccccchHHHHHHHHhC
Confidence            5789999996 9999999998888999 9999999987765432 22     332 222  443  22232222222222


Q ss_pred             cCCCccEEEEcccC
Q 019722          111 LNLPLNLLINNAGK  124 (336)
Q Consensus       111 ~~~~id~lv~nAg~  124 (336)
                        +++|++|.++|.
T Consensus       241 --~g~D~vid~~g~  252 (356)
T 1pl8_A          241 --CKPEVTIECTGA  252 (356)
T ss_dssp             --SCCSEEEECSCC
T ss_pred             --CCCCEEEECCCC
Confidence              479999999983

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1

Probab=96.90  E-value=0.0079  Score=55.51  Aligned_cols=80  Identities=18%  Similarity=0.304  Sum_probs=53.6

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCC-CEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCC--CHHHHHHHHHHHHh
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRG-ARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLS--SLSSVRNFVSQFHS  110 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~--~~~~v~~~~~~~~~  110 (336)
                      .|+++||+| +|++|...++.+...| ++|+.+++++++.+.+. ++     +.. .++  |..  +..++.+.+.++..
T Consensus       195 ~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~-~l-----Ga~-~vi--~~~~~~~~~~~~~v~~~~~  264 (380)
T 1vj0_A          195 AGKTVVIQG-AGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAE-EI-----GAD-LTL--NRRETSVEERRKAIMDITH  264 (380)
T ss_dssp             BTCEEEEEC-CSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHH-HT-----TCS-EEE--ETTTSCHHHHHHHHHHHTT
T ss_pred             CCCEEEEEC-cCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHH-Hc-----CCc-EEE--eccccCcchHHHHHHHHhC
Confidence            478999999 8999999999999999 59999999988765433 22     332 222  333  13333333332211


Q ss_pred             cCCCccEEEEcccC
Q 019722          111 LNLPLNLLINNAGK  124 (336)
Q Consensus       111 ~~~~id~lv~nAg~  124 (336)
                       -.++|++|.++|.
T Consensus       265 -g~g~Dvvid~~g~  277 (380)
T 1vj0_A          265 -GRGADFILEATGD  277 (380)
T ss_dssp             -TSCEEEEEECSSC
T ss_pred             -CCCCcEEEECCCC
Confidence             1269999999984

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}

Probab=96.88  E-value=0.0056  Score=57.06  Aligned_cols=80  Identities=24%  Similarity=0.340  Sum_probs=54.4

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhc
Q 019722           33 LSSVTAIITGATSGIGAETARVLAKRGA-RLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSL  111 (336)
Q Consensus        33 l~gk~~lItGgs~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  111 (336)
                      -.|.++||+|+ |++|...++.+...|+ +|+.+++++++.+.+ +++     +... +  .|..+.+..+.+.+.. . 
T Consensus       212 ~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~-~~l-----Ga~~-v--i~~~~~~~~~~i~~~t-~-  279 (404)
T 3ip1_A          212 RPGDNVVILGG-GPIGLAAVAILKHAGASKVILSEPSEVRRNLA-KEL-----GADH-V--IDPTKENFVEAVLDYT-N-  279 (404)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHHH-HHH-----TCSE-E--ECTTTSCHHHHHHHHT-T-
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHc-----CCCE-E--EcCCCCCHHHHHHHHh-C-
Confidence            36889999998 9999999999999999 899999998876543 333     3322 2  2444433333332221 1 


Q ss_pred             CCCccEEEEcccC
Q 019722          112 NLPLNLLINNAGK  124 (336)
Q Consensus       112 ~~~id~lv~nAg~  124 (336)
                      ..++|++|.++|.
T Consensus       280 g~g~D~vid~~g~  292 (404)
T 3ip1_A          280 GLGAKLFLEATGV  292 (404)
T ss_dssp             TCCCSEEEECSSC
T ss_pred             CCCCCEEEECCCC
Confidence            1269999999984

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}

Probab=96.86  E-value=0.0031  Score=57.89  Aligned_cols=77  Identities=17%  Similarity=0.294  Sum_probs=52.3

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHH-CCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhc-
Q 019722           34 SSVTAIITGATSGIGAETARVLAK-RGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSL-  111 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~-~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~-  111 (336)
                      .|.++||+||+|++|...++.+.. .|++|+.+++++++.+.+. ++     +... ++  |..+  .   +.+++.+. 
T Consensus       171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~-~l-----Gad~-vi--~~~~--~---~~~~v~~~~  236 (363)
T 4dvj_A          171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVK-SL-----GAHH-VI--DHSK--P---LAAEVAALG  236 (363)
T ss_dssp             SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHH-HT-----TCSE-EE--CTTS--C---HHHHHHTTC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHH-Hc-----CCCE-EE--eCCC--C---HHHHHHHhc
Confidence            588999999999999988876665 5889999999988765442 22     3322 22  3332  1   22333332 


Q ss_pred             CCCccEEEEcccC
Q 019722          112 NLPLNLLINNAGK  124 (336)
Q Consensus       112 ~~~id~lv~nAg~  124 (336)
                      .+++|++|.++|.
T Consensus       237 ~~g~Dvvid~~g~  249 (363)
T 4dvj_A          237 LGAPAFVFSTTHT  249 (363)
T ss_dssp             SCCEEEEEECSCH
T ss_pred             CCCceEEEECCCc
Confidence            2479999999883

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}

Probab=96.85  E-value=0.0031  Score=58.27  Aligned_cols=80  Identities=20%  Similarity=0.258  Sum_probs=55.1

Q ss_pred             CCCEEEEeC-CCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcC
Q 019722           34 SSVTAIITG-ATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLN  112 (336)
Q Consensus        34 ~gk~~lItG-gs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  112 (336)
                      .|.++||.| |+|++|...++.+...|++|+.+++++++.+.+. ++     +....   .|..+.+..+.+.+....  
T Consensus       170 ~g~~vlV~gag~G~vG~~a~q~a~~~Ga~Vi~~~~~~~~~~~~~-~l-----Ga~~~---~~~~~~~~~~~v~~~t~~--  238 (379)
T 3iup_A          170 EGHSALVHTAAASNLGQMLNQICLKDGIKLVNIVRKQEQADLLK-AQ-----GAVHV---CNAASPTFMQDLTEALVS--  238 (379)
T ss_dssp             TTCSCEEESSTTSHHHHHHHHHHHHHTCCEEEEESSHHHHHHHH-HT-----TCSCE---EETTSTTHHHHHHHHHHH--
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-hC-----CCcEE---EeCCChHHHHHHHHHhcC--
Confidence            477899987 9999999999999999999999999988766443 22     33222   234443333333333322  


Q ss_pred             CCccEEEEcccC
Q 019722          113 LPLNLLINNAGK  124 (336)
Q Consensus       113 ~~id~lv~nAg~  124 (336)
                      .++|++|.+.|.
T Consensus       239 ~g~d~v~d~~g~  250 (379)
T 3iup_A          239 TGATIAFDATGG  250 (379)
T ss_dssp             HCCCEEEESCEE
T ss_pred             CCceEEEECCCc
Confidence            269999999984

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*

Probab=96.82  E-value=0.004  Score=57.34  Aligned_cols=81  Identities=21%  Similarity=0.263  Sum_probs=53.8

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcC
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGA-RLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLN  112 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  112 (336)
                      .|.++||+|+ |++|...++.+...|+ +|+++++++++.+ .++++     +... +  .|.++.+..+.+.+......
T Consensus       182 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~-~a~~l-----Ga~~-v--i~~~~~~~~~~i~~~~~~~~  251 (370)
T 4ej6_A          182 AGSTVAILGG-GVIGLLTVQLARLAGATTVILSTRQATKRR-LAEEV-----GATA-T--VDPSAGDVVEAIAGPVGLVP  251 (370)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHH-HHHHH-----TCSE-E--ECTTSSCHHHHHHSTTSSST
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHH-HHHHc-----CCCE-E--ECCCCcCHHHHHHhhhhccC
Confidence            5889999997 9999999999999999 8999999987765 33333     3322 2  24444332222221100123


Q ss_pred             CCccEEEEcccC
Q 019722          113 LPLNLLINNAGK  124 (336)
Q Consensus       113 ~~id~lv~nAg~  124 (336)
                      +++|++|.++|.
T Consensus       252 gg~Dvvid~~G~  263 (370)
T 4ej6_A          252 GGVDVVIECAGV  263 (370)
T ss_dssp             TCEEEEEECSCC
T ss_pred             CCCCEEEECCCC
Confidence            479999999884

>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}

Probab=96.81  E-value=0.022  Score=51.74  Aligned_cols=142  Identities=17%  Similarity=0.073  Sum_probs=75.2

Q ss_pred             cCCCCCCCCCccccccCCCCCCCCCEEEEeCCCChHHHHHHHHHHHCCC-------EEEEeeCChH--HHHHHHHHHHhh
Q 019722           12 AGASGYGSKSTAEQVTDGCPNLSSVTAIITGATSGIGAETARVLAKRGA-------RLVLPARSLK--AAEEAKARLASD   82 (336)
Q Consensus        12 ~~~~~~~~~~~~~~~~~~~~~l~gk~~lItGgs~gIG~aia~~L~~~G~-------~V~~~~r~~~--~~~~~~~~l~~~   82 (336)
                      -+-.|+|-.+..   +-+..+++.-.|.|+||+|+||..++..|+....       ++.+++.++.  .++-...++...
T Consensus         4 ~~~~~~~~~~~~---~~~~~s~~~vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~~~~~Gva~DL~~~   80 (345)
T 4h7p_A            4 HHHHHMGTLEAQ---TQGPGSMSAVKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPALKALAGVEAELEDC   80 (345)
T ss_dssp             ---------------------CCCEEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHT
T ss_pred             cccccccccccc---ccCCCCCCCCEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCccccchhhhhhhhhc
Confidence            344556555444   3334567778999999999999999999997653       6999998753  344444455443


Q ss_pred             CCCCceEEEeccCCCHHHHHHHHHHHHhcCCCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhh
Q 019722           83 CPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETA  162 (336)
Q Consensus        83 ~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~  162 (336)
                      ...........+  +..   .       .+..-|++|..||....+ ..+.+   +.++.|.    .+++...+.+.+..
T Consensus        81 ~~~~~~~~~~~~--~~~---~-------a~~~advVvi~aG~prkp-GmtR~---DLl~~Na----~I~~~~~~~i~~~a  140 (345)
T 4h7p_A           81 AFPLLDKVVVTA--DPR---V-------AFDGVAIAIMCGAFPRKA-GMERK---DLLEMNA----RIFKEQGEAIAAVA  140 (345)
T ss_dssp             TCTTEEEEEEES--CHH---H-------HTTTCSEEEECCCCCCCT-TCCHH---HHHHHHH----HHHHHHHHHHHHHS
T ss_pred             CccCCCcEEEcC--ChH---H-------HhCCCCEEEECCCCCCCC-CCCHH---HHHHHhH----HHHHHHHHHHHhhc
Confidence            212222222221  221   1       134789999999975443 23333   3455554    45566666666542


Q ss_pred             ccCCCCCeEEEEcCCcc
Q 019722          163 KATGIQGRIVNVSSSIH  179 (336)
Q Consensus       163 ~~~~~~grIV~vsS~~~  179 (336)
                      .   +...|+.+|.+..
T Consensus       141 ~---~~~~vlvvsNPvd  154 (345)
T 4h7p_A          141 A---SDCRVVVVGNPAN  154 (345)
T ss_dssp             C---TTCEEEECSSSHH
T ss_pred             c---CceEEEEeCCCcc
Confidence            1   1346777777643

>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A

Probab=96.81  E-value=0.0026  Score=61.68  Aligned_cols=63  Identities=21%  Similarity=0.283  Sum_probs=53.2

Q ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCC-------------------hHHHHHHHHHHHhhCCCCceEEE
Q 019722           32 NLSSVTAIITGATSGIGAETARVLAKRGA-RLVLPARS-------------------LKAAEEAKARLASDCPGSDIVVL   91 (336)
Q Consensus        32 ~l~gk~~lItGgs~gIG~aia~~L~~~G~-~V~~~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~~   91 (336)
                      .+++++|+|.| .||+|.++++.|+..|. ++.+++.+                   ..+++.+.+.+++.+|+.++..+
T Consensus       324 kL~~~kVLIVG-aGGLGs~va~~La~aGVG~ItLvD~D~Ve~SNL~RQ~L~~~~DvG~~KAeaaa~~L~~iNP~v~v~~~  402 (598)
T 3vh1_A          324 IIKNTKVLLLG-AGTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATGV  402 (598)
T ss_dssp             HHHTCEEEEEC-CSHHHHHHHHHHHTTTCCEEEEECCSBCCTTSTTTSTTCCSTTCSSBHHHHHHHHHHHHCTTCEEEEE
T ss_pred             HHhCCeEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCcccccccccccccchhhcCcHHHHHHHHHHHhHCCCcEEEEE
Confidence            46788999998 68999999999999998 89998654                   25788888999988888888888


Q ss_pred             eccC
Q 019722           92 PLDL   95 (336)
Q Consensus        92 ~~Dl   95 (336)
                      ..++
T Consensus       403 ~~~I  406 (598)
T 3vh1_A          403 KLSI  406 (598)
T ss_dssp             CCCC
T ss_pred             eccc
Confidence            7665

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=96.78  E-value=0.002  Score=58.65  Aligned_cols=77  Identities=19%  Similarity=0.240  Sum_probs=53.3

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcC
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGA-RLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLN  112 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  112 (336)
                      .|.++||+|+ |++|..+++.+...|+ +|+.+++++++.+.+. ++ .    .    ...|..+.+ +.+.+.++.  .
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~-~l-a----~----~v~~~~~~~-~~~~~~~~~--~  229 (343)
T 2dq4_A          164 SGKSVLITGA-GPIGLMAAMVVRASGAGPILVSDPNPYRLAFAR-PY-A----D----RLVNPLEED-LLEVVRRVT--G  229 (343)
T ss_dssp             TTSCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGT-TT-C----S----EEECTTTSC-HHHHHHHHH--S
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-Hh-H----H----hccCcCccC-HHHHHHHhc--C
Confidence            7899999999 9999999999999999 9999999987654321 11 1    1    123544432 223333332  2


Q ss_pred             CCccEEEEcccC
Q 019722          113 LPLNLLINNAGK  124 (336)
Q Consensus       113 ~~id~lv~nAg~  124 (336)
                      .++|++|.++|.
T Consensus       230 ~g~D~vid~~g~  241 (343)
T 2dq4_A          230 SGVEVLLEFSGN  241 (343)
T ss_dssp             SCEEEEEECSCC
T ss_pred             CCCCEEEECCCC
Confidence            479999999984

>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A

Probab=96.77  E-value=0.0017  Score=55.62  Aligned_cols=72  Identities=18%  Similarity=0.072  Sum_probs=55.3

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCCC
Q 019722           35 SVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLP  114 (336)
Q Consensus        35 gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  114 (336)
                      .+.++|.|+ |.+|..+++.|.++|+ |++++++++..+...         ..+.++.+|.++++.+.++      ....
T Consensus         9 ~~~viI~G~-G~~G~~la~~L~~~g~-v~vid~~~~~~~~~~---------~~~~~i~gd~~~~~~l~~a------~i~~   71 (234)
T 2aef_A            9 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKKVLR---------SGANFVHGDPTRVSDLEKA------NVRG   71 (234)
T ss_dssp             -CEEEEESC-CHHHHHHHHHSTTSEE-EEEESCGGGHHHHHH---------TTCEEEESCTTCHHHHHHT------TCTT
T ss_pred             CCEEEEECC-ChHHHHHHHHHHhCCe-EEEEECCHHHHHHHh---------cCCeEEEcCCCCHHHHHhc------Ccch
Confidence            357888886 8999999999999999 999999988665432         1377899999998766553      1236


Q ss_pred             ccEEEEccc
Q 019722          115 LNLLINNAG  123 (336)
Q Consensus       115 id~lv~nAg  123 (336)
                      .|.+|.+.+
T Consensus        72 ad~vi~~~~   80 (234)
T 2aef_A           72 ARAVIVDLE   80 (234)
T ss_dssp             CSEEEECCS
T ss_pred             hcEEEEcCC
Confidence            788887764

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=96.77  E-value=0.0051  Score=56.61  Aligned_cols=74  Identities=20%  Similarity=0.295  Sum_probs=53.4

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCC
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNL  113 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  113 (336)
                      .|.++||+|+ |++|..+++.+...|++|+++++++++.+.+. ++     +... +  .|..+.+.++    ++.   +
T Consensus       194 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~-~l-----Ga~~-v--i~~~~~~~~~----~~~---~  256 (369)
T 1uuf_A          194 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAAK-AL-----GADE-V--VNSRNADEMA----AHL---K  256 (369)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHH-HH-----TCSE-E--EETTCHHHHH----TTT---T
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-Hc-----CCcE-E--eccccHHHHH----Hhh---c
Confidence            5889999997 89999999998889999999999988766443 33     3222 2  3555543222    221   4


Q ss_pred             CccEEEEcccC
Q 019722          114 PLNLLINNAGK  124 (336)
Q Consensus       114 ~id~lv~nAg~  124 (336)
                      ++|++|.++|.
T Consensus       257 g~Dvvid~~g~  267 (369)
T 1uuf_A          257 SFDFILNTVAA  267 (369)
T ss_dssp             CEEEEEECCSS
T ss_pred             CCCEEEECCCC
Confidence            79999999985

>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}

Probab=96.77  E-value=0.0013  Score=58.17  Aligned_cols=45  Identities=13%  Similarity=0.207  Sum_probs=39.9

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHH
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGA-RLVLPARSLKAAEEAK   76 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~   76 (336)
                      .+++||+++|.|+ ||.|++++..|++.|+ +|.++.|+.++++++.
T Consensus       118 ~~~~~k~vlvlGa-GGaaraia~~L~~~G~~~v~v~nRt~~ka~~La  163 (282)
T 3fbt_A          118 VEIKNNICVVLGS-GGAARAVLQYLKDNFAKDIYVVTRNPEKTSEIY  163 (282)
T ss_dssp             CCCTTSEEEEECS-STTHHHHHHHHHHTTCSEEEEEESCHHHHHHHC
T ss_pred             CCccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHH
Confidence            4678999999996 7999999999999998 9999999998776554

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1

Probab=96.76  E-value=0.0044  Score=57.06  Aligned_cols=79  Identities=15%  Similarity=0.241  Sum_probs=54.1

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCC-HHHHHHHHHHHHhc
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGA-RLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSS-LSSVRNFVSQFHSL  111 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~  111 (336)
                      .|+++||+|+ |++|..+++.+...|+ +|+.+++++++.+.+. ++     +.. .+  .|..+ .+++.+.+.++.. 
T Consensus       192 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~-~l-----Ga~-~v--i~~~~~~~~~~~~~~~~~~-  260 (374)
T 1cdo_A          192 PGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAK-VF-----GAT-DF--VNPNDHSEPISQVLSKMTN-  260 (374)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-HT-----TCC-EE--ECGGGCSSCHHHHHHHHHT-
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH-Hh-----CCc-eE--EeccccchhHHHHHHHHhC-
Confidence            5789999995 9999999999999999 8999999988766432 22     322 22  23332 1223333333333 


Q ss_pred             CCCccEEEEcccC
Q 019722          112 NLPLNLLINNAGK  124 (336)
Q Consensus       112 ~~~id~lv~nAg~  124 (336)
                       +++|++|.++|.
T Consensus       261 -~g~D~vid~~g~  272 (374)
T 1cdo_A          261 -GGVDFSLECVGN  272 (374)
T ss_dssp             -SCBSEEEECSCC
T ss_pred             -CCCCEEEECCCC
Confidence             479999999984

>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*

Probab=96.68  E-value=0.0029  Score=57.40  Aligned_cols=121  Identities=12%  Similarity=0.041  Sum_probs=72.9

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHCCC--E-----EEEeeCCh--HHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHH
Q 019722           36 VTAIITGATSGIGAETARVLAKRGA--R-----LVLPARSL--KAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVS  106 (336)
Q Consensus        36 k~~lItGgs~gIG~aia~~L~~~G~--~-----V~~~~r~~--~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~  106 (336)
                      ..+.||||+|.||.+++..|+..|.  .     |+++++++  +.++-....+...... -..-+.  ..  ......  
T Consensus         4 ~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~~~~~-~~~~~~--~~--~~~~~~--   76 (333)
T 5mdh_A            4 IRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALP-LLKDVI--AT--DKEEIA--   76 (333)
T ss_dssp             EEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCT-TEEEEE--EE--SCHHHH--
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhHhhhHhhhhc-ccCCEE--Ec--CCcHHH--
Confidence            4689999999999999999998875  4     99999875  4555555555542111 111111  11  111111  


Q ss_pred             HHHhcCCCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCC-eEEEEcCCccc
Q 019722          107 QFHSLNLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQG-RIVNVSSSIHS  180 (336)
Q Consensus       107 ~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~g-rIV~vsS~~~~  180 (336)
                           +...|++|+.||....+. .   .-.+.++.|+..    ++.+.+.+.+...    ++ +++++|.+...
T Consensus        77 -----~~daDvVvitAg~prkpG-~---tR~dll~~N~~i----~~~i~~~i~~~~~----~~~~vivvsNPvd~  134 (333)
T 5mdh_A           77 -----FKDLDVAILVGSMPRRDG-M---ERKDLLKANVKI----FKCQGAALDKYAK----KSVKVIVVGNPANT  134 (333)
T ss_dssp             -----TTTCSEEEECCSCCCCTT-C---CTTTTHHHHHHH----HHHHHHHHHHHSC----TTCEEEECSSSHHH
T ss_pred             -----hCCCCEEEEeCCCCCCCC-C---CHHHHHHHHHHH----HHHHHHHHHHhCC----CCeEEEEcCCchHH
Confidence                 236899999999653321 1   233456666654    4444555554431    35 68888887544

>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1

Probab=96.66  E-value=0.096  Score=47.21  Aligned_cols=118  Identities=13%  Similarity=0.069  Sum_probs=75.6

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCC--EEEEeeCChHHHHHHHHHHHhhC--C-CCceEEEeccCCCHHHHHHHHHHHH
Q 019722           35 SVTAIITGATSGIGAETARVLAKRGA--RLVLPARSLKAAEEAKARLASDC--P-GSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        35 gk~~lItGgs~gIG~aia~~L~~~G~--~V~~~~r~~~~~~~~~~~l~~~~--~-~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      .+.+.|+|+ |.+|..++..|+.+|.  +|+++++++++++.....+....  + ..++. ...|..             
T Consensus        21 ~~kV~ViGa-G~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~-~t~d~~-------------   85 (330)
T 3ldh_A           21 YNKITVVGC-DAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSLFLHTAKIV-SGKDYS-------------   85 (330)
T ss_dssp             CCEEEEEST-THHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGGGSCCSEEE-EESSSC-------------
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhhcccCCeEE-EcCCHH-------------
Confidence            467889998 9999999999999997  89999999988776665555431  1 11222 122321             


Q ss_pred             hcCCCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccc
Q 019722          110 SLNLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHS  180 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~  180 (336)
                       .+...|++|..||....+. .+.   .+.+..|.    .+.+...+.+.+..    +.+.++++|.+...
T Consensus        86 -~~~daDiVIitaG~p~kpG-~tR---~dll~~N~----~I~k~i~~~I~k~~----P~a~ilvvtNPvdi  143 (330)
T 3ldh_A           86 -VSAGSKLVVITAGARQQEG-ESR---LNLVQRNV----NIFKFIIPNIVKHS----PDCLKELHPELGTD  143 (330)
T ss_dssp             -SCSSCSEEEECCSCCCCSS-CCT---TGGGHHHH----HHHHHHHHHHHHHC----TTCEEEECSSSHHH
T ss_pred             -HhCCCCEEEEeCCCCCCCC-CCH---HHHHHhhH----HHHHHHHHHHHhhC----CCceEEeCCCccHH
Confidence             1346899999999754332 222   23344443    34555555555542    25788888887544

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}

Probab=96.66  E-value=0.015  Score=52.82  Aligned_cols=77  Identities=22%  Similarity=0.351  Sum_probs=53.1

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHC--CCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhc
Q 019722           34 SSVTAIITGATSGIGAETARVLAKR--GARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSL  111 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  111 (336)
                      .|.++||+|+ |++|...++.+...  |++|+.+++++++.+.+. ++     +... ++  |..+.   ..+.+++.+ 
T Consensus       170 ~g~~VlV~Ga-G~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~-~l-----Ga~~-vi--~~~~~---~~~~~~~~~-  235 (344)
T 2h6e_A          170 AEPVVIVNGI-GGLAVYTIQILKALMKNITIVGISRSKKHRDFAL-EL-----GADY-VS--EMKDA---ESLINKLTD-  235 (344)
T ss_dssp             SSCEEEEECC-SHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHH-HH-----TCSE-EE--CHHHH---HHHHHHHHT-
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHH-Hh-----CCCE-Ee--ccccc---hHHHHHhhc-
Confidence            6899999999 89999999988888  999999999988765443 33     3222 22  32220   123333332 


Q ss_pred             CCCccEEEEcccC
Q 019722          112 NLPLNLLINNAGK  124 (336)
Q Consensus       112 ~~~id~lv~nAg~  124 (336)
                      -.++|++|.++|.
T Consensus       236 g~g~D~vid~~g~  248 (344)
T 2h6e_A          236 GLGASIAIDLVGT  248 (344)
T ss_dssp             TCCEEEEEESSCC
T ss_pred             CCCccEEEECCCC
Confidence            2279999999984

>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}

Probab=96.65  E-value=0.043  Score=49.22  Aligned_cols=122  Identities=17%  Similarity=0.184  Sum_probs=75.4

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCC--hHHHHHHHHHHHhhC----CCCceEEEeccCCCHHHHHH
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGA-RLVLPARS--LKAAEEAKARLASDC----PGSDIVVLPLDLSSLSSVRN  103 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~-~V~~~~r~--~~~~~~~~~~l~~~~----~~~~~~~~~~Dl~~~~~v~~  103 (336)
                      |.++.+.+.|+|+ |.+|.+++..|+..|. +|++++++  ++.++-....+....    ...++... .|   .     
T Consensus         4 m~~~~~kv~ViGa-G~vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~t-~d---~-----   73 (315)
T 3tl2_A            4 MTIKRKKVSVIGA-GFTGATTAFLLAQKELADVVLVDIPQLENPTKGKALDMLEASPVQGFDANIIGT-SD---Y-----   73 (315)
T ss_dssp             CCCCCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEEE-SC---G-----
T ss_pred             cccCCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEEc-CC---H-----
Confidence            4456788999996 9999999999999999 99999999  555543333333221    12233321 11   1     


Q ss_pred             HHHHHHhcCCCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccc
Q 019722          104 FVSQFHSLNLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHS  180 (336)
Q Consensus       104 ~~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~  180 (336)
                            +.+...|++|.++|....+. .+.   .+.+..|..    +++...+.+.+..    +.+.++++|.+...
T Consensus        74 ------~a~~~aDvVIiaag~p~kpg-~~R---~dl~~~N~~----i~~~i~~~i~~~~----p~a~vlvvsNPvd~  132 (315)
T 3tl2_A           74 ------ADTADSDVVVITAGIARKPG-MSR---DDLVATNSK----IMKSITRDIAKHS----PNAIIVVLTNPVDA  132 (315)
T ss_dssp             ------GGGTTCSEEEECCSCCCCTT-CCH---HHHHHHHHH----HHHHHHHHHHHHC----TTCEEEECCSSHHH
T ss_pred             ------HHhCCCCEEEEeCCCCCCCC-CCH---HHHHHHHHH----HHHHHHHHHHHhC----CCeEEEECCChHHH
Confidence                  12346899999999754331 222   334555543    4455555554432    25788888876544

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=96.64  E-value=0.0043  Score=55.82  Aligned_cols=73  Identities=14%  Similarity=0.311  Sum_probs=50.3

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCC
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNL  113 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  113 (336)
                      .|.+++|+||+|++|...++.+...|++|+.++++. + .+.++++     +... ++  |..+.+.+.       +...
T Consensus       152 ~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~~~-~-~~~~~~l-----Ga~~-~i--~~~~~~~~~-------~~~~  214 (321)
T 3tqh_A          152 QGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTASKR-N-HAFLKAL-----GAEQ-CI--NYHEEDFLL-------AIST  214 (321)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEECHH-H-HHHHHHH-----TCSE-EE--ETTTSCHHH-------HCCS
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEeccc-h-HHHHHHc-----CCCE-EE--eCCCcchhh-------hhcc
Confidence            578999999999999999999999999999888543 3 3333333     3322 22  444333111       1124


Q ss_pred             CccEEEEccc
Q 019722          114 PLNLLINNAG  123 (336)
Q Consensus       114 ~id~lv~nAg  123 (336)
                      ++|++|.+.|
T Consensus       215 g~D~v~d~~g  224 (321)
T 3tqh_A          215 PVDAVIDLVG  224 (321)
T ss_dssp             CEEEEEESSC
T ss_pred             CCCEEEECCC
Confidence            7999999988

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=96.64  E-value=0.0083  Score=55.20  Aligned_cols=79  Identities=13%  Similarity=0.177  Sum_probs=53.0

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcC
Q 019722           33 LSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLN  112 (336)
Q Consensus        33 l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  112 (336)
                      -.|.++||.||+|++|...++.+...|++|+.+. ++++.+ .++++     +.. .++  |..+.+-.+.+. ++.  .
T Consensus       163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~~~-~~~~l-----Ga~-~vi--~~~~~~~~~~v~-~~t--~  229 (371)
T 3gqv_A          163 SKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPHNFD-LAKSR-----GAE-EVF--DYRAPNLAQTIR-TYT--K  229 (371)
T ss_dssp             SSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHH-HHHHT-----TCS-EEE--ETTSTTHHHHHH-HHT--T
T ss_pred             CCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHHHHH-HHHHc-----CCc-EEE--ECCCchHHHHHH-HHc--c
Confidence            4689999999999999999999999999998886 555544 33332     322 222  444433332222 221  2


Q ss_pred             CCccEEEEcccC
Q 019722          113 LPLNLLINNAGK  124 (336)
Q Consensus       113 ~~id~lv~nAg~  124 (336)
                      +++|++|.+.|.
T Consensus       230 g~~d~v~d~~g~  241 (371)
T 3gqv_A          230 NNLRYALDCITN  241 (371)
T ss_dssp             TCCCEEEESSCS
T ss_pred             CCccEEEECCCc
Confidence            469999999984

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=96.62  E-value=0.0039  Score=57.10  Aligned_cols=75  Identities=20%  Similarity=0.302  Sum_probs=52.5

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCC
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNL  113 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  113 (336)
                      .|+++||+|+ |++|..+++.+...|++|+.+++++++.+.+. ++     +... ++  |..+..   .+.+++.   +
T Consensus       179 ~g~~VlV~Ga-G~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~-~l-----Ga~~-v~--~~~~~~---~~~~~~~---~  242 (360)
T 1piw_A          179 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAM-KM-----GADH-YI--ATLEEG---DWGEKYF---D  242 (360)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHH-HH-----TCSE-EE--EGGGTS---CHHHHSC---S
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH-Hc-----CCCE-EE--cCcCch---HHHHHhh---c
Confidence            5889999999 99999999998889999999999887765443 33     3322 22  332220   1122222   4


Q ss_pred             CccEEEEcccC
Q 019722          114 PLNLLINNAGK  124 (336)
Q Consensus       114 ~id~lv~nAg~  124 (336)
                      ++|++|.++|.
T Consensus       243 ~~D~vid~~g~  253 (360)
T 1piw_A          243 TFDLIVVCASS  253 (360)
T ss_dssp             CEEEEEECCSC
T ss_pred             CCCEEEECCCC
Confidence            79999999985

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=96.62  E-value=0.0057  Score=55.93  Aligned_cols=75  Identities=23%  Similarity=0.263  Sum_probs=52.7

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCC
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNL  113 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  113 (336)
                      .|.+++|+|+ |++|...++.+...|++|+++++++++.+.+.+++     +... +  .|..+.+.+.       +..+
T Consensus       180 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~~l-----Ga~~-v--i~~~~~~~~~-------~~~~  243 (357)
T 2cf5_A          180 PGLRGGILGL-GGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDL-----GADD-Y--VIGSDQAKMS-------ELAD  243 (357)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHTTS-----CCSC-E--EETTCHHHHH-------HSTT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHc-----CCce-e--eccccHHHHH-------HhcC
Confidence            6899999995 99999999998889999999999987665443222     3222 1  2444433222       2234


Q ss_pred             CccEEEEcccC
Q 019722          114 PLNLLINNAGK  124 (336)
Q Consensus       114 ~id~lv~nAg~  124 (336)
                      ++|++|.++|.
T Consensus       244 g~D~vid~~g~  254 (357)
T 2cf5_A          244 SLDYVIDTVPV  254 (357)
T ss_dssp             TEEEEEECCCS
T ss_pred             CCCEEEECCCC
Confidence            79999999984

>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*

Probab=96.61  E-value=0.036  Score=50.11  Aligned_cols=123  Identities=15%  Similarity=0.064  Sum_probs=70.5

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhh---C-CCCceEEEeccCCCHHHHHHHHHHH
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGA-RLVLPARSLKAAEEAKARLASD---C-PGSDIVVLPLDLSSLSSVRNFVSQF  108 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~---~-~~~~~~~~~~Dl~~~~~v~~~~~~~  108 (336)
                      +...+.|+|| |.+|.+++..|+..|. +|++++++++.++.....+...   . ...++.+.    +|.+   ..++  
T Consensus         8 ~~~kI~VIGa-G~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t----~d~~---ea~~--   77 (331)
T 1pzg_A            8 RRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAE----YSYE---AALT--   77 (331)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEE----CSHH---HHHT--
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHHHhhhhccCCCCEEEEe----CCHH---HHhC--
Confidence            3457888897 9999999999999998 9999999988776644433321   1 12233321    2222   1222  


Q ss_pred             HhcCCCccEEEEcccCCCCCCC-CCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCcc
Q 019722          109 HSLNLPLNLLINNAGKFAHQHA-ISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIH  179 (336)
Q Consensus       109 ~~~~~~id~lv~nAg~~~~~~~-~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~  179 (336)
                           ..|++|..+|....... .+.-.-...+..|.    .+.+.+.+.+.+..    +.+.+|++|.+.+
T Consensus        78 -----~aDiVi~a~g~p~~~g~~~~~~~r~dl~~~n~----~i~~~i~~~i~~~~----p~a~vi~~tNP~~  136 (331)
T 1pzg_A           78 -----GADCVIVTAGLTKVPGKPDSEWSRNDLLPFNS----KIIREIGQNIKKYC----PKTFIIVVTNPLD  136 (331)
T ss_dssp             -----TCSEEEECCSCSSCTTCCGGGCCGGGGHHHHH----HHHHHHHHHHHHHC----TTCEEEECCSSHH
T ss_pred             -----CCCEEEEccCCCCCCCcccCCCCHHHHHHHHH----HHHHHHHHHHHHHC----CCcEEEEEcCchH
Confidence                 57999999986543311 00001112233333    34455555554432    2466666666544

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=96.57  E-value=0.0029  Score=57.64  Aligned_cols=69  Identities=16%  Similarity=0.293  Sum_probs=50.7

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCC
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNL  113 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  113 (336)
                      .|.++||+|+ |++|...++.+...|++|+++++++++.+.+ +++     +....+     ++.+.+.+          
T Consensus       176 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~-~~l-----Ga~~v~-----~~~~~~~~----------  233 (348)
T 3two_A          176 KGTKVGVAGF-GGLGSMAVKYAVAMGAEVSVFARNEHKKQDA-LSM-----GVKHFY-----TDPKQCKE----------  233 (348)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHTTCEEEEECSSSTTHHHH-HHT-----TCSEEE-----SSGGGCCS----------
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHH-Hhc-----CCCeec-----CCHHHHhc----------
Confidence            6889999997 9999999999999999999999998876643 222     333332     23332211          


Q ss_pred             CccEEEEcccC
Q 019722          114 PLNLLINNAGK  124 (336)
Q Consensus       114 ~id~lv~nAg~  124 (336)
                      ++|++|.++|.
T Consensus       234 ~~D~vid~~g~  244 (348)
T 3two_A          234 ELDFIISTIPT  244 (348)
T ss_dssp             CEEEEEECCCS
T ss_pred             CCCEEEECCCc
Confidence            79999999984

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*

Probab=96.57  E-value=0.0065  Score=55.86  Aligned_cols=79  Identities=11%  Similarity=0.179  Sum_probs=53.7

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCC-HHHHHHHHHHHHhc
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGA-RLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSS-LSSVRNFVSQFHSL  111 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~  111 (336)
                      .|.++||+|+ |++|..+++.+...|+ +|+.+++++++.+.+ +++     +... ++  |..+ .+++.+.++++.. 
T Consensus       190 ~g~~VlV~Ga-G~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~-~~l-----Ga~~-vi--~~~~~~~~~~~~v~~~~~-  258 (373)
T 2fzw_A          190 PGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFARA-KEF-----GATE-CI--NPQDFSKPIQEVLIEMTD-  258 (373)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHH-HHH-----TCSE-EE--CGGGCSSCHHHHHHHHTT-
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHc-----CCce-Ee--ccccccccHHHHHHHHhC-
Confidence            5789999995 9999999998888999 899999998876544 333     3322 22  3332 1223333333322 


Q ss_pred             CCCccEEEEcccC
Q 019722          112 NLPLNLLINNAGK  124 (336)
Q Consensus       112 ~~~id~lv~nAg~  124 (336)
                       +++|++|.++|.
T Consensus       259 -~g~D~vid~~g~  270 (373)
T 2fzw_A          259 -GGVDYSFECIGN  270 (373)
T ss_dssp             -SCBSEEEECSCC
T ss_pred             -CCCCEEEECCCc
Confidence             479999999984

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...

Probab=96.55  E-value=0.0067  Score=55.83  Aligned_cols=79  Identities=13%  Similarity=0.227  Sum_probs=53.6

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCC-HHHHHHHHHHHHhc
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGA-RLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSS-LSSVRNFVSQFHSL  111 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~  111 (336)
                      .|+++||+| +|++|..+++.+...|+ +|+.+++++++.+.+ +++     +.. .++  |..+ .+++.+.+.++.. 
T Consensus       191 ~g~~VlV~G-aG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~-~~l-----Ga~-~vi--~~~~~~~~~~~~~~~~~~-  259 (374)
T 2jhf_A          191 QGSTCAVFG-LGGVGLSVIMGCKAAGAARIIGVDINKDKFAKA-KEV-----GAT-ECV--NPQDYKKPIQEVLTEMSN-  259 (374)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH-HHT-----TCS-EEE--CGGGCSSCHHHHHHHHTT-
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHh-----CCc-eEe--cccccchhHHHHHHHHhC-
Confidence            578999999 59999999999999999 899999998876543 222     322 222  3332 1223333333322 


Q ss_pred             CCCccEEEEcccC
Q 019722          112 NLPLNLLINNAGK  124 (336)
Q Consensus       112 ~~~id~lv~nAg~  124 (336)
                       +++|++|.++|.
T Consensus       260 -~g~D~vid~~g~  271 (374)
T 2jhf_A          260 -GGVDFSFEVIGR  271 (374)
T ss_dssp             -SCBSEEEECSCC
T ss_pred             -CCCcEEEECCCC
Confidence             479999999984

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*

Probab=96.53  E-value=0.0077  Score=55.45  Aligned_cols=79  Identities=16%  Similarity=0.208  Sum_probs=53.4

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCC-HHHHHHHHHHHHhc
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGA-RLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSS-LSSVRNFVSQFHSL  111 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~  111 (336)
                      .|.++||+|+ |++|..+++.+...|+ +|+.+++++++.+.+ +++     +.. .++  |..+ .+.+.+.+.++.. 
T Consensus       195 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a-~~l-----Ga~-~vi--~~~~~~~~~~~~v~~~~~-  263 (376)
T 1e3i_A          195 PGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPKA-KAL-----GAT-DCL--NPRELDKPVQDVITELTA-  263 (376)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH-HHT-----TCS-EEE--CGGGCSSCHHHHHHHHHT-
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHh-----CCc-EEE--ccccccchHHHHHHHHhC-
Confidence            5789999995 9999999999888999 899999998876543 222     332 222  3332 1123333333322 


Q ss_pred             CCCccEEEEcccC
Q 019722          112 NLPLNLLINNAGK  124 (336)
Q Consensus       112 ~~~id~lv~nAg~  124 (336)
                       +++|++|.++|.
T Consensus       264 -~g~Dvvid~~G~  275 (376)
T 1e3i_A          264 -GGVDYSLDCAGT  275 (376)
T ss_dssp             -SCBSEEEESSCC
T ss_pred             -CCccEEEECCCC
Confidence             479999999984

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*

Probab=96.51  E-value=0.0034  Score=56.55  Aligned_cols=73  Identities=18%  Similarity=0.269  Sum_probs=50.1

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCCC
Q 019722           35 SVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLP  114 (336)
Q Consensus        35 gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  114 (336)
                      |+ +||+||+|++|...++.+...|++|+.+++++++.+.+. ++     +....+-.-|..   .    ++++  ..++
T Consensus       148 g~-VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~~-~l-----Ga~~vi~~~~~~---~----~~~~--~~~~  211 (324)
T 3nx4_A          148 GE-VVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHGYLK-SL-----GANRILSRDEFA---E----SRPL--EKQL  211 (324)
T ss_dssp             CC-EEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHH-HH-----TCSEEEEGGGSS---C----CCSS--CCCC
T ss_pred             Ce-EEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-hc-----CCCEEEecCCHH---H----HHhh--cCCC
Confidence            46 999999999999999999999999999999988765443 33     333322222221   1    1111  1247


Q ss_pred             ccEEEEccc
Q 019722          115 LNLLINNAG  123 (336)
Q Consensus       115 id~lv~nAg  123 (336)
                      +|++|.++|
T Consensus       212 ~d~v~d~~g  220 (324)
T 3nx4_A          212 WAGAIDTVG  220 (324)
T ss_dssp             EEEEEESSC
T ss_pred             ccEEEECCC
Confidence            899998876

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*

Probab=96.50  E-value=0.004  Score=56.95  Aligned_cols=78  Identities=17%  Similarity=0.244  Sum_probs=52.7

Q ss_pred             CCCCCCEEEEeCCCChHHHHH-HHHH-HHCCCE-EEEeeCChH---HHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHH
Q 019722           31 PNLSSVTAIITGATSGIGAET-ARVL-AKRGAR-LVLPARSLK---AAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNF  104 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~ai-a~~L-~~~G~~-V~~~~r~~~---~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~  104 (336)
                      .++++.++||+|+ |++|... ++.+ ...|++ |+.++++++   +.+.+ +++     +.  ..+  |..+.+ +.+ 
T Consensus       169 ~~~~~~~VlV~Ga-G~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~-~~l-----Ga--~~v--~~~~~~-~~~-  235 (357)
T 2b5w_A          169 FDWDPSSAFVLGN-GSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDII-EEL-----DA--TYV--DSRQTP-VED-  235 (357)
T ss_dssp             SCCCCCEEEEECC-SHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHH-HHT-----TC--EEE--ETTTSC-GGG-
T ss_pred             ccCCCCEEEEECC-CHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHH-HHc-----CC--ccc--CCCccC-HHH-
Confidence            3455699999999 9999999 7776 678996 999999877   65543 222     32  222  544332 222 


Q ss_pred             HHHHHhcCCCccEEEEcccC
Q 019722          105 VSQFHSLNLPLNLLINNAGK  124 (336)
Q Consensus       105 ~~~~~~~~~~id~lv~nAg~  124 (336)
                      +.++ .  +++|++|.++|.
T Consensus       236 i~~~-~--gg~Dvvid~~g~  252 (357)
T 2b5w_A          236 VPDV-Y--EQMDFIYEATGF  252 (357)
T ss_dssp             HHHH-S--CCEEEEEECSCC
T ss_pred             HHHh-C--CCCCEEEECCCC
Confidence            3344 2  379999999983

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=96.48  E-value=0.0088  Score=53.34  Aligned_cols=44  Identities=23%  Similarity=0.232  Sum_probs=39.0

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEE   74 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~   74 (336)
                      ..++.|++++|.|+ |+||+++++.|...|++|++.+|+.++.+.
T Consensus       152 ~~~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~  195 (300)
T 2rir_A          152 DYTIHGSQVAVLGL-GRTGMTIARTFAALGANVKVGARSSAHLAR  195 (300)
T ss_dssp             SSCSTTSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHHH
T ss_pred             CCCCCCCEEEEEcc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHH
Confidence            45799999999995 999999999999999999999999876543

>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1

Probab=96.44  E-value=0.0081  Score=55.10  Aligned_cols=49  Identities=20%  Similarity=0.294  Sum_probs=42.6

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARL   79 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l   79 (336)
                      ..+++||+++|.|. |.+|..+|+.|.+.|++|++.+++.+++++..+++
T Consensus       168 ~~~L~GktV~V~G~-G~VG~~~A~~L~~~GakVvv~D~~~~~l~~~a~~~  216 (364)
T 1leh_A          168 SDSLEGLAVSVQGL-GNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEE  216 (364)
T ss_dssp             SCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH
T ss_pred             ccCCCcCEEEEECc-hHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHc
Confidence            34799999999985 88999999999999999999999988777666553

>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*

Probab=96.43  E-value=0.049  Score=47.95  Aligned_cols=42  Identities=24%  Similarity=0.225  Sum_probs=35.9

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHH
Q 019722           36 VTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKAR   78 (336)
Q Consensus        36 k~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~   78 (336)
                      +++.|.| +|.+|.++|..|++.|++|++.+|+++.++...+.
T Consensus         5 ~kV~VIG-aG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~   46 (283)
T 4e12_A            5 TNVTVLG-TGVLGSQIAFQTAFHGFAVTAYDINTDALDAAKKR   46 (283)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHH
T ss_pred             CEEEEEC-CCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHH
Confidence            5667776 58899999999999999999999999887766654

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=96.43  E-value=0.0061  Score=51.15  Aligned_cols=42  Identities=29%  Similarity=0.355  Sum_probs=36.9

Q ss_pred             EEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHH
Q 019722           37 TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKAR   78 (336)
Q Consensus        37 ~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~   78 (336)
                      +++|+||+|.+|.++++.|+++|++|++++|++++.+...+.
T Consensus         2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~   43 (212)
T 1jay_A            2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAE   43 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHH
T ss_pred             eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Confidence            578899999999999999999999999999998877665543

>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*

Probab=96.42  E-value=0.0056  Score=57.02  Aligned_cols=43  Identities=14%  Similarity=0.152  Sum_probs=38.5

Q ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHH
Q 019722           32 NLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEA   75 (336)
Q Consensus        32 ~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~   75 (336)
                      ++.+++++|+|+ |.+|..+++.+...|++|+++++++.+++..
T Consensus       169 ~l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~  211 (401)
T 1x13_A          169 KVPPAKVMVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQV  211 (401)
T ss_dssp             EECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCGGGHHHH
T ss_pred             CcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH
Confidence            578999999995 8999999999999999999999998876654

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=96.42  E-value=0.011  Score=52.61  Aligned_cols=43  Identities=21%  Similarity=0.298  Sum_probs=38.4

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHH
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEE   74 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~   74 (336)
                      .++.||+++|.| .|+||+++++.|...|++|++++|+.++.+.
T Consensus       151 ~~l~g~~v~IiG-~G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~  193 (293)
T 3d4o_A          151 FTIHGANVAVLG-LGRVGMSVARKFAALGAKVKVGARESDLLAR  193 (293)
T ss_dssp             SCSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSHHHHHH
T ss_pred             CCCCCCEEEEEe-eCHHHHHHHHHHHhCCCEEEEEECCHHHHHH
Confidence            478999999999 5899999999999999999999999876543

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=96.41  E-value=0.0045  Score=54.31  Aligned_cols=43  Identities=30%  Similarity=0.350  Sum_probs=39.2

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHH
Q 019722           35 SVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARL   79 (336)
Q Consensus        35 gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l   79 (336)
                      +|+++|.|+ ||.|++++..|++.|.+|.++.|+.++++++. ++
T Consensus       118 ~k~vlvlGa-GGaaraia~~L~~~G~~v~V~nRt~~ka~~la-~~  160 (269)
T 3phh_A          118 YQNALILGA-GGSAKALACELKKQGLQVSVLNRSSRGLDFFQ-RL  160 (269)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCTTHHHHH-HH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HC
Confidence            899999996 99999999999999999999999999888776 44

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1

Probab=96.39  E-value=0.014  Score=53.55  Aligned_cols=78  Identities=17%  Similarity=0.224  Sum_probs=52.2

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcC
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGA-RLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLN  112 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  112 (336)
                      .|+++||+|+ |++|...++.+...|+ +|+.+++++++.+.+ +++     +... ++  |..+.+..+.+ .++.  .
T Consensus       190 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a-~~l-----Ga~~-vi--~~~~~~~~~~~-~~~~--~  256 (371)
T 1f8f_A          190 PASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELA-KQL-----GATH-VI--NSKTQDPVAAI-KEIT--D  256 (371)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHH-HHH-----TCSE-EE--ETTTSCHHHHH-HHHT--T
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHH-HHc-----CCCE-Ee--cCCccCHHHHH-HHhc--C
Confidence            5789999995 9999999998888999 799999998876543 333     3322 22  33332222222 2221  2


Q ss_pred             CCccEEEEcccC
Q 019722          113 LPLNLLINNAGK  124 (336)
Q Consensus       113 ~~id~lv~nAg~  124 (336)
                      +++|++|.++|.
T Consensus       257 gg~D~vid~~g~  268 (371)
T 1f8f_A          257 GGVNFALESTGS  268 (371)
T ss_dssp             SCEEEEEECSCC
T ss_pred             CCCcEEEECCCC
Confidence            379999999983

>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}

Probab=96.39  E-value=0.039  Score=49.70  Aligned_cols=120  Identities=11%  Similarity=0.103  Sum_probs=74.7

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhhC----CCCceEEEeccCCCHHHHHHHHHH
Q 019722           33 LSSVTAIITGATSGIGAETARVLAKRGA-RLVLPARSLKAAEEAKARLASDC----PGSDIVVLPLDLSSLSSVRNFVSQ  107 (336)
Q Consensus        33 l~gk~~lItGgs~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~----~~~~~~~~~~Dl~~~~~v~~~~~~  107 (336)
                      |+.+.+.|+| +|.+|.+++..|+..|. +|+++++++++++.....+....    .+.++... .   +.         
T Consensus         3 m~~~kI~iiG-aG~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v~~t-~---d~---------   68 (321)
T 3p7m_A            3 MARKKITLVG-AGNIGGTLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQTCPIEGVDFKVRGT-N---DY---------   68 (321)
T ss_dssp             CCCCEEEEEC-CSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEE-S---CG---------
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHhCCCceEEEEeCChHHHHHHHHHHHhhhhhcCCCcEEEEc-C---CH---------
Confidence            4556788888 59999999999999998 99999999887765555555421    12233221 1   11         


Q ss_pred             HHhcCCCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccc
Q 019722          108 FHSLNLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHS  180 (336)
Q Consensus       108 ~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~  180 (336)
                        +.+..-|++|..+|....+. .+.   .+.+..|.    .+++...+.+.+..    +.+.++++|.+...
T Consensus        69 --~a~~~aDvVIi~ag~p~k~G-~~R---~dl~~~N~----~i~~~i~~~i~~~~----p~a~vivvtNPvd~  127 (321)
T 3p7m_A           69 --KDLENSDVVIVTAGVPRKPG-MSR---DDLLGINI----KVMQTVGEGIKHNC----PNAFVICITNPLDI  127 (321)
T ss_dssp             --GGGTTCSEEEECCSCCCCTT-CCH---HHHHHHHH----HHHHHHHHHHHHHC----TTCEEEECCSSHHH
T ss_pred             --HHHCCCCEEEEcCCcCCCCC-CCH---HHHHHHhH----HHHHHHHHHHHHHC----CCcEEEEecCchHH
Confidence              11236799999999643321 222   23444444    34555555555442    25788888776544

>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}

Probab=96.37  E-value=0.006  Score=56.27  Aligned_cols=79  Identities=15%  Similarity=0.207  Sum_probs=53.7

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCC-HHHHHHHHHHHHhc
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGA-RLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSS-LSSVRNFVSQFHSL  111 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~  111 (336)
                      .|.++||+|+ |++|...++.+...|+ +|+++++++++.+.+ +++     +... ++  |..+ ...+.+.++++.. 
T Consensus       193 ~g~~VlV~Ga-G~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a-~~l-----Ga~~-vi--~~~~~~~~~~~~i~~~~~-  261 (378)
T 3uko_A          193 PGSNVAIFGL-GTVGLAVAEGAKTAGASRIIGIDIDSKKYETA-KKF-----GVNE-FV--NPKDHDKPIQEVIVDLTD-  261 (378)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHHTCSCEEEECSCTTHHHHH-HTT-----TCCE-EE--CGGGCSSCHHHHHHHHTT-
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHc-----CCcE-EE--ccccCchhHHHHHHHhcC-
Confidence            5889999998 9999999999999999 899999998876632 222     3222 22  3321 1223333333322 


Q ss_pred             CCCccEEEEcccC
Q 019722          112 NLPLNLLINNAGK  124 (336)
Q Consensus       112 ~~~id~lv~nAg~  124 (336)
                       +++|++|.++|.
T Consensus       262 -gg~D~vid~~g~  273 (378)
T 3uko_A          262 -GGVDYSFECIGN  273 (378)
T ss_dssp             -SCBSEEEECSCC
T ss_pred             -CCCCEEEECCCC
Confidence             379999999984

>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}

Probab=96.37  E-value=0.0022  Score=55.90  Aligned_cols=42  Identities=17%  Similarity=0.342  Sum_probs=36.5

Q ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHH
Q 019722           32 NLSSVTAIITGATSGIGAETARVLAKRGA-RLVLPARSLKAAEEA   75 (336)
Q Consensus        32 ~l~gk~~lItGgs~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~   75 (336)
                      +++| +++|.|+ ||.|++++..|++.|+ +|+++.|+.++++++
T Consensus       106 ~~~~-~vliiGa-Gg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~l  148 (253)
T 3u62_A          106 EVKE-PVVVVGA-GGAARAVIYALLQMGVKDIWVVNRTIERAKAL  148 (253)
T ss_dssp             CCCS-SEEEECC-SHHHHHHHHHHHHTTCCCEEEEESCHHHHHTC
T ss_pred             CCCC-eEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHH
Confidence            4578 8999985 8999999999999998 899999998876544

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}

Probab=96.37  E-value=0.01  Score=55.06  Aligned_cols=79  Identities=16%  Similarity=0.205  Sum_probs=52.7

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcC
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGA-RLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLN  112 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  112 (336)
                      .|.++||.|+ |++|...++.+...|+ +|+.+++++++.+.+. +   .  +.  .++  |..+.+.+...+.++.. -
T Consensus       185 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~---l--Ga--~~i--~~~~~~~~~~~~~~~~~-g  252 (398)
T 2dph_A          185 PGSHVYIAGA-GPVGRCAAAGARLLGAACVIVGDQNPERLKLLS-D---A--GF--ETI--DLRNSAPLRDQIDQILG-K  252 (398)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHH-T---T--TC--EEE--ETTSSSCHHHHHHHHHS-S
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH-H---c--CC--cEE--cCCCcchHHHHHHHHhC-C
Confidence            5889999996 9999999998888999 9999999988765432 2   1  33  333  44443221122222211 1


Q ss_pred             CCccEEEEcccC
Q 019722          113 LPLNLLINNAGK  124 (336)
Q Consensus       113 ~~id~lv~nAg~  124 (336)
                      .++|++|.++|.
T Consensus       253 ~g~Dvvid~~g~  264 (398)
T 2dph_A          253 PEVDCGVDAVGF  264 (398)
T ss_dssp             SCEEEEEECSCT
T ss_pred             CCCCEEEECCCC
Confidence            269999999985

>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B*

Probab=96.37  E-value=0.0057  Score=57.49  Aligned_cols=80  Identities=19%  Similarity=0.319  Sum_probs=60.9

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCCh-------------------HHHHHHHHHHHhhCCCCceEEEe
Q 019722           33 LSSVTAIITGATSGIGAETARVLAKRGA-RLVLPARSL-------------------KAAEEAKARLASDCPGSDIVVLP   92 (336)
Q Consensus        33 l~gk~~lItGgs~gIG~aia~~L~~~G~-~V~~~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~~   92 (336)
                      +++..|+|.| .||+|.++++.|+..|. ++.+++.+.                   .+++.+.+.+++.+|+.++..+.
T Consensus        38 L~~~~VlvvG-~GGlGs~va~~La~aGvg~i~ivD~D~Ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~lnp~v~v~~~~  116 (434)
T 1tt5_B           38 LDTCKVLVIG-AGGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPNCNVVPHF  116 (434)
T ss_dssp             HHTCCEEEEC-SSTHHHHHHHHHHHTTCCCEEEEECCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHSTTCCCEEEE
T ss_pred             hcCCEEEEEC-cCHHHHHHHHHHHHcCCCEEEEEcCCEechhccCCCcCCChhHcCcHHHHHHHHHHHhhCCCCEEEEEe
Confidence            3678899998 58999999999999998 888885431                   46777888888888888888888


Q ss_pred             ccCCCHHHHHHHHHHHHhcCCCccEEEEcc
Q 019722           93 LDLSSLSSVRNFVSQFHSLNLPLNLLINNA  122 (336)
Q Consensus        93 ~Dl~~~~~v~~~~~~~~~~~~~id~lv~nA  122 (336)
                      .++.+..  ..++       ...|+||.+.
T Consensus       117 ~~i~~~~--~~~~-------~~~DlVi~~~  137 (434)
T 1tt5_B          117 NKIQDFN--DTFY-------RQFHIIVCGL  137 (434)
T ss_dssp             SCGGGBC--HHHH-------TTCSEEEECC
T ss_pred             cccchhh--HHHh-------cCCCEEEECC
Confidence            7775432  1222       2579998774

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A

Probab=96.37  E-value=0.0087  Score=54.55  Aligned_cols=79  Identities=11%  Similarity=0.165  Sum_probs=52.4

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcC
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGA-RLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLN  112 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  112 (336)
                      .|.++||+|+ |++|...++.+...|+ +|+.+++++++.+. ++++     +.. .++  |..+.+..+.+.+...  -
T Consensus       166 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~-~~~l-----Ga~-~vi--~~~~~~~~~~v~~~t~--g  233 (352)
T 3fpc_A          166 LGDTVCVIGI-GPVGLMSVAGANHLGAGRIFAVGSRKHCCDI-ALEY-----GAT-DII--NYKNGDIVEQILKATD--G  233 (352)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHTTTCSSEEEECCCHHHHHH-HHHH-----TCC-EEE--CGGGSCHHHHHHHHTT--T
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHH-HHHh-----CCc-eEE--cCCCcCHHHHHHHHcC--C
Confidence            5789999985 9999999999888999 89999999877653 3333     332 222  3333332333222211  1


Q ss_pred             CCccEEEEcccC
Q 019722          113 LPLNLLINNAGK  124 (336)
Q Consensus       113 ~~id~lv~nAg~  124 (336)
                      .++|++|.++|.
T Consensus       234 ~g~D~v~d~~g~  245 (352)
T 3fpc_A          234 KGVDKVVIAGGD  245 (352)
T ss_dssp             CCEEEEEECSSC
T ss_pred             CCCCEEEECCCC
Confidence            269999999885

>1y8q_B Anthracycline-, ubiquitin-like 2 activating enzyme E1B; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_B* 3kyc_B* 3kyd_B* 2px9_A

Probab=96.35  E-value=0.0057  Score=60.02  Aligned_cols=82  Identities=22%  Similarity=0.265  Sum_probs=61.6

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCCh-------------------HHHHHHHHHHHhhCCCCceEEEe
Q 019722           33 LSSVTAIITGATSGIGAETARVLAKRGA-RLVLPARSL-------------------KAAEEAKARLASDCPGSDIVVLP   92 (336)
Q Consensus        33 l~gk~~lItGgs~gIG~aia~~L~~~G~-~V~~~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~~   92 (336)
                      |.+..|+|.|+ ||+|.++++.|+..|. ++.+++.+.                   .+++.+.+.+++.+|+.++..+.
T Consensus        15 L~~s~VlVVGa-GGLGsevak~La~aGVG~ItlvD~D~Ve~SNLnRQflf~~~dVGk~KAeaaa~~L~~iNP~v~V~a~~   93 (640)
T 1y8q_B           15 VAGGRVLVVGA-GGIGCELLKNLVLTGFSHIDLIDLDTIDVSNLNRQFLFQKKHVGRSKAQVAKESVLQFYPKANIVAYH   93 (640)
T ss_dssp             HHHCEEEEECC-SHHHHHHHHHHHHHTCCEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHTTCTTCEEEEEE
T ss_pred             HhcCeEEEECc-CHHHHHHHHHHHHcCCCeEEEecCCEEChhhcCCCcCCChhHcChHHHHHHHHHHHHHCCCCeEEEEe
Confidence            45678999985 9999999999999998 899987542                   45677778888888888888888


Q ss_pred             ccCCCHHHHHHHHHHHHhcCCCccEEEEcc
Q 019722           93 LDLSSLSSVRNFVSQFHSLNLPLNLLINNA  122 (336)
Q Consensus        93 ~Dl~~~~~v~~~~~~~~~~~~~id~lv~nA  122 (336)
                      .+++.......++       ...|+||.+.
T Consensus        94 ~~i~~~~~~~~~~-------~~~DlVvda~  116 (640)
T 1y8q_B           94 DSIMNPDYNVEFF-------RQFILVMNAL  116 (640)
T ss_dssp             SCTTSTTSCHHHH-------TTCSEEEECC
T ss_pred             cccchhhhhHhhh-------cCCCEEEECC
Confidence            8876432112222       3679988764

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=96.29  E-value=0.012  Score=54.16  Aligned_cols=52  Identities=15%  Similarity=0.174  Sum_probs=44.4

Q ss_pred             cccccCCCCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHH
Q 019722           23 AEQVTDGCPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAK   76 (336)
Q Consensus        23 ~~~~~~~~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~   76 (336)
                      +..++. .+.+.+++++|.|+ |.+|..+++.+...|++|++++|++++++.+.
T Consensus       173 ~~l~~~-~~~v~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~  224 (381)
T 3p2y_A          173 PMLTTA-AGTVKPASALVLGV-GVAGLQALATAKRLGAKTTGYDVRPEVAEQVR  224 (381)
T ss_dssp             SCEECS-SCEECCCEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSGGGHHHHH
T ss_pred             hhhhcc-cCCcCCCEEEEECc-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence            345554 77889999999997 89999999999999999999999998776554

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*

Probab=96.23  E-value=0.011  Score=54.23  Aligned_cols=79  Identities=16%  Similarity=0.217  Sum_probs=52.6

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCC-HHHHHHHHHHHHhc
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGA-RLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSS-LSSVRNFVSQFHSL  111 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~  111 (336)
                      .|.++||+|+ |++|...++.+...|+ +|+.+++++++.+.+. ++     +.. .++  |..+ .+.+.+.+.++.. 
T Consensus       191 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~l-----Ga~-~vi--~~~~~~~~~~~~i~~~t~-  259 (373)
T 1p0f_A          191 PGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAI-EL-----GAT-ECL--NPKDYDKPIYEVICEKTN-  259 (373)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH-HT-----TCS-EEE--CGGGCSSCHHHHHHHHTT-
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHH-Hc-----CCc-EEE--ecccccchHHHHHHHHhC-
Confidence            5789999995 9999999998888999 8999999988765432 22     332 222  3322 1123333333322 


Q ss_pred             CCCccEEEEcccC
Q 019722          112 NLPLNLLINNAGK  124 (336)
Q Consensus       112 ~~~id~lv~nAg~  124 (336)
                       +++|++|.++|.
T Consensus       260 -gg~Dvvid~~g~  271 (373)
T 1p0f_A          260 -GGVDYAVECAGR  271 (373)
T ss_dssp             -SCBSEEEECSCC
T ss_pred             -CCCCEEEECCCC
Confidence             479999999984

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1

Probab=96.21  E-value=0.016  Score=53.75  Aligned_cols=80  Identities=15%  Similarity=0.192  Sum_probs=53.6

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcC
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGA-RLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLN  112 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  112 (336)
                      .|.++||.| +|++|...++.+...|+ +|+++++++++.+.+ +++     +..  +  .|.++.+.+.+.+.++.. -
T Consensus       185 ~g~~VlV~G-aG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a-~~l-----Ga~--~--i~~~~~~~~~~~v~~~t~-g  252 (398)
T 1kol_A          185 PGSTVYVAG-AGPVGLAAAASARLLGAAVVIVGDLNPARLAHA-KAQ-----GFE--I--ADLSLDTPLHEQIAALLG-E  252 (398)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHH-HHT-----TCE--E--EETTSSSCHHHHHHHHHS-S
T ss_pred             CCCEEEEEC-CcHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHH-HHc-----CCc--E--EccCCcchHHHHHHHHhC-C
Confidence            578999999 59999999998888999 799999998876544 222     432  2  344433322222222211 1


Q ss_pred             CCccEEEEcccCC
Q 019722          113 LPLNLLINNAGKF  125 (336)
Q Consensus       113 ~~id~lv~nAg~~  125 (336)
                      .++|++|.++|..
T Consensus       253 ~g~Dvvid~~G~~  265 (398)
T 1kol_A          253 PEVDCAVDAVGFE  265 (398)
T ss_dssp             SCEEEEEECCCTT
T ss_pred             CCCCEEEECCCCc
Confidence            3699999999853

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A

Probab=96.20  E-value=0.0064  Score=55.61  Aligned_cols=36  Identities=22%  Similarity=0.326  Sum_probs=31.2

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCCh
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGARLVLPARSL   69 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~   69 (336)
                      .|.++||+||+|++|...++.+...|++++++.++.
T Consensus       167 ~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~  202 (357)
T 1zsy_A          167 PGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDR  202 (357)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCC
T ss_pred             CCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCc
Confidence            578999999999999999988888999888776543

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=96.17  E-value=0.0095  Score=55.70  Aligned_cols=58  Identities=21%  Similarity=0.300  Sum_probs=42.7

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHH
Q 019722           36 VTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVR  102 (336)
Q Consensus        36 k~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~  102 (336)
                      ..++|.|. |-+|..+++.|.++|..|++++++++..+.+.+        ..+.++.+|.++++.+.
T Consensus         5 ~~viIiG~-Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~--------~g~~vi~GDat~~~~L~   62 (413)
T 3l9w_A            5 MRVIIAGF-GRFGQITGRLLLSSGVKMVVLDHDPDHIETLRK--------FGMKVFYGDATRMDLLE   62 (413)
T ss_dssp             CSEEEECC-SHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHH--------TTCCCEESCTTCHHHHH
T ss_pred             CeEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHh--------CCCeEEEcCCCCHHHHH
Confidence            45788885 889999999999999999999999987765432        12334555555554443

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=96.16  E-value=0.029  Score=50.41  Aligned_cols=88  Identities=23%  Similarity=0.208  Sum_probs=55.1

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHH-------HHhhCCCCceEEEeccCCCHHHHHHHH
Q 019722           33 LSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKAR-------LASDCPGSDIVVLPLDLSSLSSVRNFV  105 (336)
Q Consensus        33 l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~-------l~~~~~~~~~~~~~~Dl~~~~~v~~~~  105 (336)
                      ...+++.|.| .|.+|..+++.|++.|++|++++|++++.+++.+.       +.+...+..+.++.  +.++..++.++
T Consensus        29 ~~~~~I~iIG-~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~~~~~~e~~~~aDvVi~~--vp~~~~~~~v~  105 (320)
T 4dll_A           29 PYARKITFLG-TGSMGLPMARRLCEAGYALQVWNRTPARAASLAALGATIHEQARAAARDADIVVSM--LENGAVVQDVL  105 (320)
T ss_dssp             CCCSEEEEEC-CTTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCEEESSHHHHHTTCSEEEEC--CSSHHHHHHHH
T ss_pred             cCCCEEEEEC-ccHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHCCCEeeCCHHHHHhcCCEEEEE--CCCHHHHHHHH
Confidence            4456777776 69999999999999999999999999887665431       11111123444433  44556666666


Q ss_pred             H--HHHhcCCCccEEEEccc
Q 019722          106 S--QFHSLNLPLNLLINNAG  123 (336)
Q Consensus       106 ~--~~~~~~~~id~lv~nAg  123 (336)
                      .  .+.....+=.++|++..
T Consensus       106 ~~~~~~~~l~~~~~vi~~st  125 (320)
T 4dll_A          106 FAQGVAAAMKPGSLFLDMAS  125 (320)
T ss_dssp             TTTCHHHHCCTTCEEEECSC
T ss_pred             cchhHHhhCCCCCEEEecCC
Confidence            4  44443333345555543

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*

Probab=96.15  E-value=0.032  Score=50.60  Aligned_cols=78  Identities=15%  Similarity=0.214  Sum_probs=51.3

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHC-CCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcC
Q 019722           34 SSVTAIITGATSGIGAETARVLAKR-GARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLN  112 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  112 (336)
                      .|.+++|.|+ |++|...++.+... |.+|+.+++++++.+.+ +++     +... ++  |..+ +..+.+.+....  
T Consensus       171 ~g~~vlv~Ga-G~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~-~~l-----Ga~~-~i--~~~~-~~~~~v~~~t~g--  237 (345)
T 3jv7_A          171 PGSTAVVIGV-GGLGHVGIQILRAVSAARVIAVDLDDDRLALA-REV-----GADA-AV--KSGA-GAADAIRELTGG--  237 (345)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESCHHHHHHH-HHT-----TCSE-EE--ECST-THHHHHHHHHGG--
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHH-HHc-----CCCE-EE--cCCC-cHHHHHHHHhCC--
Confidence            5789999997 99999988877777 67999999998876643 222     3332 22  2222 222332222211  


Q ss_pred             CCccEEEEcccC
Q 019722          113 LPLNLLINNAGK  124 (336)
Q Consensus       113 ~~id~lv~nAg~  124 (336)
                      .++|++|.+.|.
T Consensus       238 ~g~d~v~d~~G~  249 (345)
T 3jv7_A          238 QGATAVFDFVGA  249 (345)
T ss_dssp             GCEEEEEESSCC
T ss_pred             CCCeEEEECCCC
Confidence            279999999984

>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*

Probab=96.12  E-value=0.0074  Score=55.06  Aligned_cols=81  Identities=22%  Similarity=0.300  Sum_probs=61.0

Q ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCC-------------------hHHHHHHHHHHHhhCCCCceEEE
Q 019722           32 NLSSVTAIITGATSGIGAETARVLAKRGA-RLVLPARS-------------------LKAAEEAKARLASDCPGSDIVVL   91 (336)
Q Consensus        32 ~l~gk~~lItGgs~gIG~aia~~L~~~G~-~V~~~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~~   91 (336)
                      .|.+..|+|.| .||+|.++++.|+..|. ++.+++.+                   ..+++.+.+.+++.+|..++..+
T Consensus        33 ~L~~~~VlivG-~GGlG~~ia~~La~~Gvg~itlvD~d~V~~sNL~rq~~~~~~diG~~Ka~~~~~~l~~lnp~v~v~~~  111 (346)
T 1y8q_A           33 RLRASRVLLVG-LKGLGAEIAKNLILAGVKGLTMLDHEQVTPEDPGAQFLIRTGSVGRNRAEASLERAQNLNPMVDVKVD  111 (346)
T ss_dssp             HHHTCEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECCCBCCSSCGGGCTTSCSSCTTSBHHHHHHHHHHHTCTTSEEEEE
T ss_pred             HHhCCeEEEEC-CCHHHHHHHHHHHHcCCCEEEEEECCCcchhhCCCCCccccccCcCCHHHHHHHHHHhHCCCeEEEEE
Confidence            35678999998 58999999999999998 89888532                   24778888888888888888888


Q ss_pred             eccCCCHHHHHHHHHHHHhcCCCccEEEEcc
Q 019722           92 PLDLSSLSSVRNFVSQFHSLNLPLNLLINNA  122 (336)
Q Consensus        92 ~~Dl~~~~~v~~~~~~~~~~~~~id~lv~nA  122 (336)
                      ..++++  ....++       ...|+||.+.
T Consensus       112 ~~~~~~--~~~~~~-------~~~dvVv~~~  133 (346)
T 1y8q_A          112 TEDIEK--KPESFF-------TQFDAVCLTC  133 (346)
T ss_dssp             CSCGGG--CCHHHH-------TTCSEEEEES
T ss_pred             ecccCc--chHHHh-------cCCCEEEEcC
Confidence            776643  112222       3579988764

>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*

Probab=96.09  E-value=0.34  Score=43.34  Aligned_cols=119  Identities=13%  Similarity=0.146  Sum_probs=73.0

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCC--EEEEeeCChHHHHHHHHHHHhhCC--CCceEEEeccCCCHHHHHHHHHHHHh
Q 019722           35 SVTAIITGATSGIGAETARVLAKRGA--RLVLPARSLKAAEEAKARLASDCP--GSDIVVLPLDLSSLSSVRNFVSQFHS  110 (336)
Q Consensus        35 gk~~lItGgs~gIG~aia~~L~~~G~--~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~  110 (336)
                      .+++.|+|+ |.+|.+++..|+.+|.  +|++++++++.++.....+....+  +..+.+.. |  +.           +
T Consensus         6 ~~kI~IIGa-G~vG~sla~~l~~~~~~~ev~l~Di~~~~~~~~~~dl~~~~~~~~~~~~i~~-~--~~-----------~   70 (316)
T 1ldn_A            6 GARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWH-G--DY-----------D   70 (316)
T ss_dssp             SCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEE-C--CG-----------G
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhhHHHHhhhcCCCeEEEc-C--cH-----------H
Confidence            367889998 9999999999999885  899999998766644444544321  11233332 1  11           1


Q ss_pred             cCCCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccc
Q 019722          111 LNLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHS  180 (336)
Q Consensus       111 ~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~  180 (336)
                      .+...|++|.++|+..... .+.   .+.+..|    ..+.+.+.+.+.+..    +.+.++++|.+...
T Consensus        71 al~~aDvViia~~~~~~~g-~~r---~dl~~~n----~~i~~~i~~~i~~~~----p~a~~iv~tNPv~~  128 (316)
T 1ldn_A           71 DCRDADLVVICAGANQKPG-ETR---LDLVDKN----IAIFRSIVESVMASG----FQGLFLVATNPVDI  128 (316)
T ss_dssp             GTTTCSEEEECCSCCCCTT-TCS---GGGHHHH----HHHHHHHHHHHHHHT----CCSEEEECSSSHHH
T ss_pred             HhCCCCEEEEcCCCCCCCC-CCH---HHHHHcC----hHHHHHHHHHHHHHC----CCCEEEEeCCchHH
Confidence            1336899999999755432 122   2234444    345556666665542    24677777665443

>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}

Probab=96.06  E-value=0.048  Score=47.99  Aligned_cols=41  Identities=20%  Similarity=0.235  Sum_probs=36.6

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHH
Q 019722           36 VTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAK   76 (336)
Q Consensus        36 k~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~   76 (336)
                      +++.|.|++|.+|.++++.|++.|++|++++|++++.+.+.
T Consensus        12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~~~~~   52 (286)
T 3c24_A           12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEGRDRLQ   52 (286)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHH
Confidence            47899999999999999999999999999999988776554

>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*

Probab=96.04  E-value=0.12  Score=46.32  Aligned_cols=121  Identities=13%  Similarity=0.178  Sum_probs=73.2

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCC--EEEEeeCChHHHHHHHHHHHhhCC--CCceEEEeccCCCHHHHHHHHHHH
Q 019722           33 LSSVTAIITGATSGIGAETARVLAKRGA--RLVLPARSLKAAEEAKARLASDCP--GSDIVVLPLDLSSLSSVRNFVSQF  108 (336)
Q Consensus        33 l~gk~~lItGgs~gIG~aia~~L~~~G~--~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~  108 (336)
                      +....+.|+|+ |.+|.+++..|+.+|.  .|++++.++++++.....+....+  +..+.+.. |  +.          
T Consensus         4 m~~~KI~IIGa-G~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~-~--~~----------   69 (317)
T 3d0o_A            4 FKGNKVVLIGN-GAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHATPYSPTTVRVKA-G--EY----------   69 (317)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHGGGSSSCCEEEE-C--CG----------
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhhhhcCCCeEEEe-C--CH----------
Confidence            45567888998 9999999999999984  899999998777654444433211  12333322 2  11          


Q ss_pred             HhcCCCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccc
Q 019722          109 HSLNLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHS  180 (336)
Q Consensus       109 ~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~  180 (336)
                       +.+...|++|..+|....+. .+.   ...+..|.    .+++.+.+.+.+..    +.+.||++|.+...
T Consensus        70 -~a~~~aDvVvi~ag~~~~~g-~~r---~dl~~~n~----~i~~~i~~~i~~~~----p~a~viv~tNPv~~  128 (317)
T 3d0o_A           70 -SDCHDADLVVICAGAAQKPG-ETR---LDLVSKNL----KIFKSIVGEVMASK----FDGIFLVATNPVDI  128 (317)
T ss_dssp             -GGGTTCSEEEECCCCCCCTT-CCH---HHHHHHHH----HHHHHHHHHHHHTT----CCSEEEECSSSHHH
T ss_pred             -HHhCCCCEEEECCCCCCCCC-CcH---HHHHHHHH----HHHHHHHHHHHHhC----CCcEEEEecCcHHH
Confidence             11236899999999743321 121   12333333    35555555555542    25788887765443

>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}

Probab=96.04  E-value=0.089  Score=47.46  Aligned_cols=116  Identities=11%  Similarity=0.086  Sum_probs=68.9

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhh----CCCCceEEEeccCCCHHHHHHHHHHHHh
Q 019722           36 VTAIITGATSGIGAETARVLAKRGA-RLVLPARSLKAAEEAKARLASD----CPGSDIVVLPLDLSSLSSVRNFVSQFHS  110 (336)
Q Consensus        36 k~~lItGgs~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~----~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  110 (336)
                      +.+.|+|| |.+|.+++..|+..|. +|++.+++++.++.....+...    ....++... .|   .+           
T Consensus        15 ~kI~ViGa-G~vG~~iA~~la~~g~~~V~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t-~d---~~-----------   78 (328)
T 2hjr_A           15 KKISIIGA-GQIGSTIALLLGQKDLGDVYMFDIIEGVPQGKALDLNHCMALIGSPAKIFGE-NN---YE-----------   78 (328)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEE-SC---GG-----------
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhHhhccCCCCEEEEC-CC---HH-----------
Confidence            57888897 9999999999999998 9999999988777543333321    112233332 22   11           


Q ss_pred             cCCCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCcc
Q 019722          111 LNLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIH  179 (336)
Q Consensus       111 ~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~  179 (336)
                      .+...|++|.++|....+. .+..   +.+..|    ..+.+.+.+.+.+..    +.+.+|++|.+..
T Consensus        79 al~~aD~VI~avg~p~k~g-~tr~---dl~~~n----~~i~~~i~~~i~~~~----p~a~viv~tNP~~  135 (328)
T 2hjr_A           79 YLQNSDVVIITAGVPRKPN-MTRS---DLLTVN----AKIVGSVAENVGKYC----PNAFVICITNPLD  135 (328)
T ss_dssp             GGTTCSEEEECCSCCCCTT-CCSG---GGHHHH----HHHHHHHHHHHHHHC----TTCEEEECCSSHH
T ss_pred             HHCCCCEEEEcCCCCCCCC-Cchh---hHHhhh----HHHHHHHHHHHHHHC----CCeEEEEecCchH
Confidence            1236799999998654322 1221   122223    234555555555432    2466676666543

>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*

Probab=96.01  E-value=0.078  Score=47.06  Aligned_cols=118  Identities=15%  Similarity=0.104  Sum_probs=72.2

Q ss_pred             EEEEeCCCChHHHHHHHHHHHCCC--EEEEeeCChHHHHHHHHHHHhhC--CCCceEEEeccCCCHHHHHHHHHHHHhcC
Q 019722           37 TAIITGATSGIGAETARVLAKRGA--RLVLPARSLKAAEEAKARLASDC--PGSDIVVLPLDLSSLSSVRNFVSQFHSLN  112 (336)
Q Consensus        37 ~~lItGgs~gIG~aia~~L~~~G~--~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  112 (336)
                      .+.|+|+ |.+|.+++..|+..|.  +|++++++++.++.....+....  ......+...  +|.    ..       +
T Consensus         2 kI~ViGa-G~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t--~d~----~a-------~   67 (294)
T 1oju_A            2 KLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGG--ADY----SL-------L   67 (294)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEE--SCG----GG-------G
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEe--CCH----HH-------h
Confidence            4778898 9999999999999997  89999999988763333333321  0112222211  111    11       2


Q ss_pred             CCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccc
Q 019722          113 LPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHS  180 (336)
Q Consensus       113 ~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~  180 (336)
                      ..-|++|..+|....+ ..+.   .+.+..|.    .+++...+.+.+..    +.+.++++|.+...
T Consensus        68 ~~aDiVViaag~~~kp-G~~R---~dl~~~N~----~i~~~i~~~i~~~~----p~a~iivvsNPvd~  123 (294)
T 1oju_A           68 KGSEIIVVTAGLARKP-GMTR---LDLAHKNA----GIIKDIAKKIVENA----PESKILVVTNPMDV  123 (294)
T ss_dssp             TTCSEEEECCCCCCCS-SCCH---HHHHHHHH----HHHHHHHHHHHTTS----TTCEEEECSSSHHH
T ss_pred             CCCCEEEECCCCCCCC-CCcH---HHHHHHHH----HHHHHHHHHHHhhC----CCeEEEEeCCcchH
Confidence            3679999999975332 1222   23344453    45566666665542    35788888886544

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=95.97  E-value=0.0077  Score=55.78  Aligned_cols=45  Identities=11%  Similarity=0.185  Sum_probs=39.2

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEA   75 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~   75 (336)
                      ..++.|++++|+|+ |++|+.+++.+...|++|++++|++.+.+..
T Consensus       167 ~~~l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~  211 (384)
T 1l7d_A          167 AGTVPPARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQV  211 (384)
T ss_dssp             TEEECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHH
T ss_pred             CCCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence            35688999999995 8999999999999999999999998766544

>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*

Probab=95.91  E-value=0.064  Score=48.08  Aligned_cols=45  Identities=20%  Similarity=0.232  Sum_probs=37.8

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCC--EEEEeeCChHHHHHHH
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGA--RLVLPARSLKAAEEAK   76 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~--~V~~~~r~~~~~~~~~   76 (336)
                      +.+..+++.|.| .|.+|.++++.|.+.|+  +|++++|+++..+...
T Consensus        29 ~~~~~~kI~IIG-~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~   75 (314)
T 3ggo_A           29 KSLSMQNVLIVG-VGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAV   75 (314)
T ss_dssp             CCCSCSEEEEES-CSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHH
T ss_pred             hhcCCCEEEEEe-eCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHH
Confidence            344457888998 89999999999999999  9999999998776543

>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}

Probab=95.87  E-value=0.034  Score=49.00  Aligned_cols=85  Identities=18%  Similarity=0.246  Sum_probs=57.2

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCC---EEEEeeCChHHHHHHHHHH--------HhhCCCCceEEEeccCCCHHHHHH
Q 019722           35 SVTAIITGATSGIGAETARVLAKRGA---RLVLPARSLKAAEEAKARL--------ASDCPGSDIVVLPLDLSSLSSVRN  103 (336)
Q Consensus        35 gk~~lItGgs~gIG~aia~~L~~~G~---~V~~~~r~~~~~~~~~~~l--------~~~~~~~~~~~~~~Dl~~~~~v~~  103 (336)
                      .+++.|.|+ |.+|.++++.|++.|+   +|++++|+++++++..++.        .....+..+.++.+   .+..+..
T Consensus         3 ~~~I~iIG~-G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~~gi~~~~~~~~~~~~aDvVilav---~p~~~~~   78 (280)
T 3tri_A            3 TSNITFIGG-GNMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEKCGVHTTQDNRQGALNADVVVLAV---KPHQIKM   78 (280)
T ss_dssp             CSCEEEESC-SHHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHTTCCEEESCHHHHHSSCSEEEECS---CGGGHHH
T ss_pred             CCEEEEEcc-cHHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHHcCCEEeCChHHHHhcCCeEEEEe---CHHHHHH
Confidence            356777775 9999999999999998   8999999998877665531        11111345555544   4566777


Q ss_pred             HHHHHHhc-CCCccEEEEccc
Q 019722          104 FVSQFHSL-NLPLNLLINNAG  123 (336)
Q Consensus       104 ~~~~~~~~-~~~id~lv~nAg  123 (336)
                      +++++... ..+=.++|.+++
T Consensus        79 vl~~l~~~~l~~~~iiiS~~a   99 (280)
T 3tri_A           79 VCEELKDILSETKILVISLAV   99 (280)
T ss_dssp             HHHHHHHHHHTTTCEEEECCT
T ss_pred             HHHHHHhhccCCCeEEEEecC
Confidence            77777654 322237777655

>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}

Probab=95.81  E-value=0.086  Score=45.71  Aligned_cols=87  Identities=16%  Similarity=0.287  Sum_probs=57.1

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCE-EEEeeCChHHHHHHHHHHH--------hhCCCCceEEEeccCCCHHHHHHHH
Q 019722           35 SVTAIITGATSGIGAETARVLAKRGAR-LVLPARSLKAAEEAKARLA--------SDCPGSDIVVLPLDLSSLSSVRNFV  105 (336)
Q Consensus        35 gk~~lItGgs~gIG~aia~~L~~~G~~-V~~~~r~~~~~~~~~~~l~--------~~~~~~~~~~~~~Dl~~~~~v~~~~  105 (336)
                      +.++.|.|+ |.+|..+++.|++.|++ |.+++|++++.+...+.+.        +...+..+.++.   ..+..+..++
T Consensus        10 ~m~i~iiG~-G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~Dvvi~a---v~~~~~~~v~   85 (266)
T 3d1l_A           10 DTPIVLIGA-GNLATNLAKALYRKGFRIVQVYSRTEESARELAQKVEAEYTTDLAEVNPYAKLYIVS---LKDSAFAELL   85 (266)
T ss_dssp             GCCEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHTTCEEESCGGGSCSCCSEEEEC---CCHHHHHHHH
T ss_pred             CCeEEEEcC-CHHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCceeCCHHHHhcCCCEEEEe---cCHHHHHHHH
Confidence            446788885 99999999999999998 8899999988776655421        101122333332   2344667788


Q ss_pred             HHHHhcCCCccEEEEcccCC
Q 019722          106 SQFHSLNLPLNLLINNAGKF  125 (336)
Q Consensus       106 ~~~~~~~~~id~lv~nAg~~  125 (336)
                      +++.....+=.++|++.+..
T Consensus        86 ~~l~~~~~~~~ivv~~s~~~  105 (266)
T 3d1l_A           86 QGIVEGKREEALMVHTAGSI  105 (266)
T ss_dssp             HHHHTTCCTTCEEEECCTTS
T ss_pred             HHHHhhcCCCcEEEECCCCC
Confidence            77765443334677776543

>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1

Probab=95.79  E-value=0.16  Score=45.63  Aligned_cols=118  Identities=13%  Similarity=0.168  Sum_probs=72.4

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHCCC--EEEEeeCChHHHHHHHHHHHhhCC-CCceEEEeccCCCHHHHHHHHHHHHhcC
Q 019722           36 VTAIITGATSGIGAETARVLAKRGA--RLVLPARSLKAAEEAKARLASDCP-GSDIVVLPLDLSSLSSVRNFVSQFHSLN  112 (336)
Q Consensus        36 k~~lItGgs~gIG~aia~~L~~~G~--~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  112 (336)
                      ..+.|+|+ |.+|.+++..|+.++.  +|+++++++++++.....+....+ ...+.+.. |  +           .+.+
T Consensus         6 ~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~v~~-~--~-----------~~a~   70 (318)
T 1ez4_A            6 QKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYS-G--E-----------YSDC   70 (318)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEE-C--C-----------GGGG
T ss_pred             CEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCeEEEE-C--C-----------HHHh
Confidence            57889998 9999999999999886  899999999888766666654321 12233322 2  1           1113


Q ss_pred             CCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccc
Q 019722          113 LPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHS  180 (336)
Q Consensus       113 ~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~  180 (336)
                      ...|++|..+|....+. .+.   .+.+..|.    .+++...+.+.+..    +.+.||++|.+...
T Consensus        71 ~~aDvVii~ag~~~~~g-~~R---~dl~~~n~----~i~~~i~~~i~~~~----p~a~iiv~tNPv~~  126 (318)
T 1ez4_A           71 KDADLVVITAGAPQKPG-ESR---LDLVNKNL----NILSSIVKPVVDSG----FDGIFLVAANPVDI  126 (318)
T ss_dssp             TTCSEEEECCCC--------------CHHHHH----HHHHHHHHHHHHTT----CCSEEEECSSSHHH
T ss_pred             CCCCEEEECCCCCCCCC-CCH---HHHHHHHH----HHHHHHHHHHHHhC----CCeEEEEeCCcHHH
Confidence            46899999999743321 111   12333333    35555556665542    36888888776544

>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}

Probab=95.77  E-value=0.0097  Score=52.35  Aligned_cols=38  Identities=26%  Similarity=0.337  Sum_probs=35.4

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCC
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARS   68 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~   68 (336)
                      .+++||.++|.|+++-+|+.++..|+++|++|.++.|+
T Consensus       156 i~l~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~  193 (285)
T 3p2o_A          156 IDLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIK  193 (285)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCC
Confidence            57899999999999999999999999999999998765

>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*

Probab=95.75  E-value=0.21  Score=44.25  Aligned_cols=39  Identities=23%  Similarity=0.299  Sum_probs=34.4

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHH
Q 019722           36 VTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEA   75 (336)
Q Consensus        36 k~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~   75 (336)
                      +++.|.|+ |.+|.+++..|++.|++|++++|+++.++..
T Consensus        16 ~~I~VIG~-G~mG~~iA~~la~~G~~V~~~d~~~~~~~~~   54 (302)
T 1f0y_A           16 KHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAKS   54 (302)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHH
Confidence            56888886 8999999999999999999999998877654

>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*

Probab=95.72  E-value=0.14  Score=45.77  Aligned_cols=120  Identities=15%  Similarity=0.148  Sum_probs=70.1

Q ss_pred             EEEEeCCCChHHHHHHHHHHHC-C--CEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCC
Q 019722           37 TAIITGATSGIGAETARVLAKR-G--ARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNL  113 (336)
Q Consensus        37 ~~lItGgs~gIG~aia~~L~~~-G--~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  113 (336)
                      .+.|+||+|.+|.+++..|+.+ +  .+|++++.++ +.+-....+...  ...+.+...--++.   ...       +.
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~-~~~G~a~Dl~~~--~~~~~v~~~~~~~~---~~~-------~~   68 (312)
T 3hhp_A            2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSHI--PTAVKIKGFSGEDA---TPA-------LE   68 (312)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSST-THHHHHHHHHTS--CSSEEEEEECSSCC---HHH-------HT
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCC-CchhHHHHhhCC--CCCceEEEecCCCc---HHH-------hC
Confidence            4789999999999999999886 5  3899999987 333334444432  22222221100111   111       22


Q ss_pred             CccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCcccc
Q 019722          114 PLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSW  181 (336)
Q Consensus       114 ~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~  181 (336)
                      ..|++|..||....+ ..+   =.+.++.|..    +++...+.+.+..    +.+.++++|.+....
T Consensus        69 ~aDivii~ag~~rkp-G~~---R~dll~~N~~----I~~~i~~~i~~~~----p~a~vlvvtNPvd~~  124 (312)
T 3hhp_A           69 GADVVLISAGVARKP-GMD---RSDLFNVNAG----IVKNLVQQVAKTC----PKACIGIITNPVNTT  124 (312)
T ss_dssp             TCSEEEECCSCSCCT-TCC---HHHHHHHHHH----HHHHHHHHHHHHC----TTSEEEECSSCHHHH
T ss_pred             CCCEEEEeCCCCCCC-CCC---HHHHHHHHHH----HHHHHHHHHHHHC----CCcEEEEecCcchhH
Confidence            689999999974332 122   2345555654    4444444444432    257888888875443

>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*

Probab=95.67  E-value=0.048  Score=49.31  Aligned_cols=79  Identities=19%  Similarity=0.247  Sum_probs=49.3

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHC-CCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcC
Q 019722           34 SSVTAIITGATSGIGAETARVLAKR-GARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLN  112 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  112 (336)
                      .|.+++|.|+ |++|...+..+... |++|+.+++++++.+... ++     +....   .|..+.+.++.+.+...  -
T Consensus       163 ~g~~VlV~Ga-G~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~-~~-----Ga~~~---i~~~~~~~~~~v~~~t~--g  230 (348)
T 4eez_A          163 PGDWQVIFGA-GGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAK-KI-----GADVT---INSGDVNPVDEIKKITG--G  230 (348)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHH-HT-----TCSEE---EEC-CCCHHHHHHHHTT--S
T ss_pred             CCCEEEEEcC-CCccHHHHHHHHHhCCCEEEEEECcHHHhhhhh-hc-----CCeEE---EeCCCCCHHHHhhhhcC--C
Confidence            5789999986 78888777777766 679999999988754322 22     33322   24444444444333221  1


Q ss_pred             CCccEEEEcccC
Q 019722          113 LPLNLLINNAGK  124 (336)
Q Consensus       113 ~~id~lv~nAg~  124 (336)
                      .++|.++.+++.
T Consensus       231 ~g~d~~~~~~~~  242 (348)
T 4eez_A          231 LGVQSAIVCAVA  242 (348)
T ss_dssp             SCEEEEEECCSC
T ss_pred             CCceEEEEeccC
Confidence            257888888763

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}

Probab=95.66  E-value=0.012  Score=52.62  Aligned_cols=68  Identities=15%  Similarity=0.149  Sum_probs=46.7

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCC
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNL  113 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  113 (336)
                      .|.++||+|+ |++|...++.+...|++|+.++ ++++.+.+ +++     +.. .++  |  |.       +++   .+
T Consensus       142 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~-~~~~~~~~-~~l-----Ga~-~v~--~--d~-------~~v---~~  198 (315)
T 3goh_A          142 KQREVLIVGF-GAVNNLLTQMLNNAGYVVDLVS-ASLSQALA-AKR-----GVR-HLY--R--EP-------SQV---TQ  198 (315)
T ss_dssp             SCCEEEEECC-SHHHHHHHHHHHHHTCEEEEEC-SSCCHHHH-HHH-----TEE-EEE--S--SG-------GGC---CS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEE-ChhhHHHH-HHc-----CCC-EEE--c--CH-------HHh---CC
Confidence            5899999999 9999999999989999999999 66655443 333     332 222  2  21       111   34


Q ss_pred             CccEEEEcccC
Q 019722          114 PLNLLINNAGK  124 (336)
Q Consensus       114 ~id~lv~nAg~  124 (336)
                      ++|++|.+.|.
T Consensus       199 g~Dvv~d~~g~  209 (315)
T 3goh_A          199 KYFAIFDAVNS  209 (315)
T ss_dssp             CEEEEECC---
T ss_pred             CccEEEECCCc
Confidence            79999999884

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}

Probab=95.66  E-value=0.051  Score=49.11  Aligned_cols=79  Identities=20%  Similarity=0.207  Sum_probs=51.3

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCE-EEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcC
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGAR-LVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLN  112 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~~-V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  112 (336)
                      .|++++|.|+ |++|...++.+...|+. ++++++++++.+. ++++     +... ++  |.++.+. .+..+++.+ .
T Consensus       160 ~g~~VlV~Ga-G~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~-a~~l-----Ga~~-~i--~~~~~~~-~~~~~~~~~-~  227 (346)
T 4a2c_A          160 ENKNVIIIGA-GTIGLLAIQCAVALGAKSVTAIDISSEKLAL-AKSF-----GAMQ-TF--NSSEMSA-PQMQSVLRE-L  227 (346)
T ss_dssp             TTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHH-HHHT-----TCSE-EE--ETTTSCH-HHHHHHHGG-G
T ss_pred             CCCEEEEECC-CCcchHHHHHHHHcCCcEEEEEechHHHHHH-HHHc-----CCeE-EE--eCCCCCH-HHHHHhhcc-c
Confidence            6889999986 89999999999999985 5678888876553 3332     3332 22  3333222 223333322 3


Q ss_pred             CCccEEEEcccC
Q 019722          113 LPLNLLINNAGK  124 (336)
Q Consensus       113 ~~id~lv~nAg~  124 (336)
                      ...|+++.++|.
T Consensus       228 ~g~d~v~d~~G~  239 (346)
T 4a2c_A          228 RFNQLILETAGV  239 (346)
T ss_dssp             CSSEEEEECSCS
T ss_pred             CCcccccccccc
Confidence            468999998873

>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*

Probab=95.64  E-value=0.15  Score=45.93  Aligned_cols=121  Identities=12%  Similarity=0.176  Sum_probs=74.6

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCC--EEEEeeCChHHHHHHHHHHHhhCC-CCceEEEeccCCCHHHHHHHHHHHH
Q 019722           33 LSSVTAIITGATSGIGAETARVLAKRGA--RLVLPARSLKAAEEAKARLASDCP-GSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        33 l~gk~~lItGgs~gIG~aia~~L~~~G~--~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      -+...+.|+|+ |.+|.+++..|+.++.  +|+++++++++++.....+....+ ...+.+.. |  +.+          
T Consensus         7 ~~~~KI~IiGa-G~vG~~la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~-~--~~~----------   72 (326)
T 2zqz_A            7 KDHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNALPFTSPKKIYS-A--EYS----------   72 (326)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEE-C--CGG----------
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHHHHHhcCCeEEEE-C--CHH----------
Confidence            34468999998 9999999999999885  899999999888776666654311 12233322 2  111          


Q ss_pred             hcCCCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccc
Q 019722          110 SLNLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHS  180 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~  180 (336)
                       .+...|++|..+|....+ ..+.   ...+..|.    .+++...+.+.+..    +.+.||++|.+...
T Consensus        73 -a~~~aDvVii~ag~~~k~-g~~R---~dl~~~n~----~i~~~i~~~i~~~~----p~a~iiv~tNPv~~  130 (326)
T 2zqz_A           73 -DAKDADLVVITAGAPQKP-GETR---LDLVNKNL----KILKSIVDPIVDSG----FNGIFLVAANPVDI  130 (326)
T ss_dssp             -GGGGCSEEEECCCCC------CH---HHHHHHHH----HHHHHHHHHHHHHT----CCSEEEECSSSHHH
T ss_pred             -HhCCCCEEEEcCCCCCCC-CCCH---HHHHHHHH----HHHHHHHHHHHHHC----CCeEEEEeCCcHHH
Confidence             123679999999974332 1121   12333343    35555555555542    26888888776544

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=95.62  E-value=0.017  Score=53.57  Aligned_cols=51  Identities=16%  Similarity=0.167  Sum_probs=43.4

Q ss_pred             ccccCCCCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHH
Q 019722           24 EQVTDGCPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAK   76 (336)
Q Consensus        24 ~~~~~~~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~   76 (336)
                      -.++. .+.+.+.+++|+|+ |.+|..+++.+...|++|+++++++.+.+...
T Consensus       180 ~l~t~-~g~v~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~  230 (405)
T 4dio_A          180 MMMTA-AGTVPAAKIFVMGA-GVAGLQAIATARRLGAVVSATDVRPAAKEQVA  230 (405)
T ss_dssp             CEEET-TEEECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSTTHHHHHH
T ss_pred             hhhcc-CCCcCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH
Confidence            45554 67788999999997 89999999999999999999999988766543

>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6

Probab=95.60  E-value=0.041  Score=48.89  Aligned_cols=80  Identities=20%  Similarity=0.241  Sum_probs=53.3

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCCC
Q 019722           35 SVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLP  114 (336)
Q Consensus        35 gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  114 (336)
                      .+++.|.||.|.+|.++++.|++.|++|++++|+++..  ..+.+.    +..+.++.+-   +..+..+++++.....+
T Consensus        21 ~~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~~~~--~~~~~~----~aDvVilavp---~~~~~~vl~~l~~~l~~   91 (298)
T 2pv7_A           21 IHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWAV--AESILA----NADVVIVSVP---INLTLETIERLKPYLTE   91 (298)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGGG--HHHHHT----TCSEEEECSC---GGGHHHHHHHHGGGCCT
T ss_pred             CCEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCcccC--HHHHhc----CCCEEEEeCC---HHHHHHHHHHHHhhcCC
Confidence            35688999999999999999999999999999986531  111111    4566666543   33477777777654432


Q ss_pred             ccEEEEccc
Q 019722          115 LNLLINNAG  123 (336)
Q Consensus       115 id~lv~nAg  123 (336)
                      =.+++..++
T Consensus        92 ~~iv~~~~s  100 (298)
T 2pv7_A           92 NMLLADLTS  100 (298)
T ss_dssp             TSEEEECCS
T ss_pred             CcEEEECCC
Confidence            234554444

>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A

Probab=95.59  E-value=0.015  Score=51.14  Aligned_cols=44  Identities=23%  Similarity=0.329  Sum_probs=38.6

Q ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHH
Q 019722           32 NLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAK   76 (336)
Q Consensus        32 ~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~   76 (336)
                      ++++++++|.|+ |++|+++++.|++.|++|++++|+.++++++.
T Consensus       126 ~~~~~~v~iiGa-G~~g~aia~~L~~~g~~V~v~~r~~~~~~~l~  169 (275)
T 2hk9_A          126 EVKEKSILVLGA-GGASRAVIYALVKEGAKVFLWNRTKEKAIKLA  169 (275)
T ss_dssp             TGGGSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSHHHHHHHT
T ss_pred             CcCCCEEEEECc-hHHHHHHHHHHHHcCCEEEEEECCHHHHHHHH
Confidence            678899999995 79999999999999999999999987766543

>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*

Probab=95.56  E-value=0.023  Score=49.46  Aligned_cols=47  Identities=23%  Similarity=0.280  Sum_probs=40.5

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHH
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARL   79 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l   79 (336)
                      .+++| +++|.|+ |++|+++++.|.+.|++|.+++|+.++++++.+++
T Consensus       113 ~~l~~-~v~iiG~-G~~g~~~a~~l~~~g~~v~v~~r~~~~~~~l~~~~  159 (263)
T 2d5c_A          113 IPLKG-PALVLGA-GGAGRAVAFALREAGLEVWVWNRTPQRALALAEEF  159 (263)
T ss_dssp             CCCCS-CEEEECC-SHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHH
T ss_pred             CCCCC-eEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh
Confidence            36888 9999995 88999999999999999999999988877666554

>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}

Probab=95.48  E-value=0.065  Score=47.50  Aligned_cols=84  Identities=13%  Similarity=0.174  Sum_probs=56.8

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHH-------HHhhCCCCceEEEeccCCCHHHHHHHHHHH
Q 019722           36 VTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKAR-------LASDCPGSDIVVLPLDLSSLSSVRNFVSQF  108 (336)
Q Consensus        36 k~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~-------l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~  108 (336)
                      +++.|.| .|.+|..+++.|++.|++|++++|++++.+.+.+.       +..... ..+.++  -+.++..++.+++.+
T Consensus        16 ~~I~vIG-~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~-aDvvi~--~vp~~~~~~~v~~~l   91 (296)
T 3qha_A           16 LKLGYIG-LGNMGAPMATRMTEWPGGVTVYDIRIEAMTPLAEAGATLADSVADVAA-ADLIHI--TVLDDAQVREVVGEL   91 (296)
T ss_dssp             CCEEEEC-CSTTHHHHHHHHTTSTTCEEEECSSTTTSHHHHHTTCEECSSHHHHTT-SSEEEE--CCSSHHHHHHHHHHH
T ss_pred             CeEEEEC-cCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCEEcCCHHHHHh-CCEEEE--ECCChHHHHHHHHHH
Confidence            3566666 78999999999999999999999998876655431       111111 233333  355677788888877


Q ss_pred             HhcCCCccEEEEccc
Q 019722          109 HSLNLPLNLLINNAG  123 (336)
Q Consensus       109 ~~~~~~id~lv~nAg  123 (336)
                      .....+=.++|++..
T Consensus        92 ~~~l~~g~ivv~~st  106 (296)
T 3qha_A           92 AGHAKPGTVIAIHST  106 (296)
T ss_dssp             HTTCCTTCEEEECSC
T ss_pred             HHhcCCCCEEEEeCC
Confidence            765544456666654

>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*

Probab=95.45  E-value=0.02  Score=48.33  Aligned_cols=38  Identities=21%  Similarity=0.251  Sum_probs=33.3

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHH
Q 019722           36 VTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEE   74 (336)
Q Consensus        36 k~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~   74 (336)
                      +++.|+| +|.+|.++++.|++.|++|++++|++++.+.
T Consensus        29 ~~I~iiG-~G~~G~~la~~l~~~g~~V~~~~r~~~~~~~   66 (215)
T 2vns_A           29 PKVGILG-SGDFARSLATRLVGSGFKVVVGSRNPKRTAR   66 (215)
T ss_dssp             CCEEEEC-CSHHHHHHHHHHHHTTCCEEEEESSHHHHHH
T ss_pred             CEEEEEc-cCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence            4688888 8999999999999999999999999876554

>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}

Probab=95.45  E-value=0.06  Score=45.15  Aligned_cols=78  Identities=9%  Similarity=0.170  Sum_probs=52.0

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      -.++.++++.|.| .|.+|.++++.|++.|++|++++|+++           ...+..+.++.+-   ...+..+++++.
T Consensus        14 ~~~~~~~~I~iiG-~G~mG~~la~~l~~~g~~V~~~~~~~~-----------~~~~aD~vi~av~---~~~~~~v~~~l~   78 (209)
T 2raf_A           14 NLYFQGMEITIFG-KGNMGQAIGHNFEIAGHEVTYYGSKDQ-----------ATTLGEIVIMAVP---YPALAALAKQYA   78 (209)
T ss_dssp             ------CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECTTCC-----------CSSCCSEEEECSC---HHHHHHHHHHTH
T ss_pred             ccccCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEcCCHH-----------HhccCCEEEEcCC---cHHHHHHHHHHH
Confidence            4557888999999 799999999999999999999999876           1124566666543   666777777765


Q ss_pred             hcCCCccEEEEccc
Q 019722          110 SLNLPLNLLINNAG  123 (336)
Q Consensus       110 ~~~~~id~lv~nAg  123 (336)
                      .... =.+++.++.
T Consensus        79 ~~~~-~~~vi~~~~   91 (209)
T 2raf_A           79 TQLK-GKIVVDITN   91 (209)
T ss_dssp             HHHT-TSEEEECCC
T ss_pred             HhcC-CCEEEEECC
Confidence            4333 235555543

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*

Probab=95.43  E-value=0.011  Score=53.38  Aligned_cols=39  Identities=33%  Similarity=0.525  Sum_probs=34.6

Q ss_pred             EEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHH
Q 019722           37 TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEA   75 (336)
Q Consensus        37 ~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~   75 (336)
                      ++||+||+|++|..+++.+...|++|+++++++++.+.+
T Consensus       153 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~  191 (330)
T 1tt7_A          153 SVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYL  191 (330)
T ss_dssp             CEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHH
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence            799999999999999999999999999999987765543

>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A

Probab=95.42  E-value=0.016  Score=52.50  Aligned_cols=72  Identities=19%  Similarity=0.086  Sum_probs=56.4

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCCC
Q 019722           35 SVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLP  114 (336)
Q Consensus        35 gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  114 (336)
                      .+.++|.|+ |.+|..++++|.++|. |++++++++..+ .. +       ..+.++.+|.++++.+.++      ...+
T Consensus       115 ~~~viI~G~-G~~g~~l~~~L~~~g~-v~vid~~~~~~~-~~-~-------~~~~~i~gd~~~~~~L~~a------~i~~  177 (336)
T 1lnq_A          115 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKK-VL-R-------SGANFVHGDPTRVSDLEKA------NVRG  177 (336)
T ss_dssp             -CEEEEESC-CHHHHHHHTTGGGSCE-EEEESCGGGHHH-HH-H-------TTCEEEESCTTSHHHHHHT------CSTT
T ss_pred             cCCEEEECC-cHHHHHHHHHHHhCCc-EEEEeCChhhhh-HH-h-------CCcEEEEeCCCCHHHHHhc------Chhh
Confidence            457899996 8999999999999999 999999988765 32 1       3678899999999887754      1236


Q ss_pred             ccEEEEccc
Q 019722          115 LNLLINNAG  123 (336)
Q Consensus       115 id~lv~nAg  123 (336)
                      .|.+|...+
T Consensus       178 a~~vi~~~~  186 (336)
T 1lnq_A          178 ARAVIVDLE  186 (336)
T ss_dssp             EEEEEECCS
T ss_pred             ccEEEEcCC
Confidence            788887653

>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*

Probab=95.39  E-value=0.32  Score=43.63  Aligned_cols=121  Identities=10%  Similarity=0.059  Sum_probs=70.5

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhh----CCCCceEEEeccCCCHHHHHHHHHHHHh
Q 019722           36 VTAIITGATSGIGAETARVLAKRGA-RLVLPARSLKAAEEAKARLASD----CPGSDIVVLPLDLSSLSSVRNFVSQFHS  110 (336)
Q Consensus        36 k~~lItGgs~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~----~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  110 (336)
                      +.+.|+|| |.+|..++..|+..|. +|+++++++++++.....+...    ....++... .|   .+           
T Consensus         5 ~kI~VIGa-G~vG~~ia~~la~~g~~~v~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t-~d---~~-----------   68 (322)
T 1t2d_A            5 AKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGS-NT---YD-----------   68 (322)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEE-CC---GG-----------
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhhhhcCCCcEEEEC-CC---HH-----------
Confidence            46888897 9999999999999998 9999999988776555444432    112233322 12   11           


Q ss_pred             cCCCccEEEEcccCCCCCCCCCchh-hhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccc
Q 019722          111 LNLPLNLLINNAGKFAHQHAISEDG-IEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHS  180 (336)
Q Consensus       111 ~~~~id~lv~nAg~~~~~~~~~~~~-~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~  180 (336)
                      .+...|++|.++|..........+. -.+.+..|.    .+.+.+.+.+.+..    +.+.+|++|.+.+.
T Consensus        69 al~~aD~Vi~a~g~p~k~g~~~qe~~r~dl~~~n~----~i~~~i~~~i~~~~----p~a~iiv~tNP~~~  131 (322)
T 1t2d_A           69 DLAGADVVIVTAGFTKAPGKSDKEWNRDDLLPLNN----KIMIEIGGHIKKNC----PNAFIIVVTNPVDV  131 (322)
T ss_dssp             GGTTCSEEEECCSCSSCTTCCSTTCCGGGGHHHHH----HHHHHHHHHHHHHC----TTSEEEECSSSHHH
T ss_pred             HhCCCCEEEEeCCCCCCCCCCcccccHHHHHHHHH----HHHHHHHHHHHHHC----CCeEEEEecCChHH
Confidence            1236799999999654322110000 112233332    34555555555432    24677777665443

>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}

Probab=95.36  E-value=0.21  Score=44.69  Aligned_cols=119  Identities=17%  Similarity=0.197  Sum_probs=71.2

Q ss_pred             EEEEeCCCChHHHHHHHHHHHCCC--EEEEeeCChHHHHHHHHHHHhhCC--CCceEEEeccCCCHHHHHHHHHHHHhcC
Q 019722           37 TAIITGATSGIGAETARVLAKRGA--RLVLPARSLKAAEEAKARLASDCP--GSDIVVLPLDLSSLSSVRNFVSQFHSLN  112 (336)
Q Consensus        37 ~~lItGgs~gIG~aia~~L~~~G~--~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  112 (336)
                      .+.|+|+ |.+|.+++..|+.+|.  +|+++++++++++-....+....+  ...+.+...|.  .           +.+
T Consensus         2 kv~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~v~~~~~--~-----------~a~   67 (314)
T 3nep_X            2 KVTVIGA-GNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPIHGFDTRVTGTND--Y-----------GPT   67 (314)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHHHHTCCCEEEEESS--S-----------GGG
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhccccccCCCcEEEECCC--H-----------HHh
Confidence            4678896 9999999999999996  899999998876654444443210  11222221121  1           123


Q ss_pred             CCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCcccc
Q 019722          113 LPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSW  181 (336)
Q Consensus       113 ~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~  181 (336)
                      ..-|++|.+||....+. .+.   .+.++.|.    .+++...+.+.+.    ++.+.++++|.+....
T Consensus        68 ~~aDvVii~ag~~~kpG-~~R---~dl~~~N~----~i~~~i~~~i~~~----~p~a~vivvtNPvd~~  124 (314)
T 3nep_X           68 EDSDVCIITAGLPRSPG-MSR---DDLLAKNT----EIVGGVTEQFVEG----SPDSTIIVVANPLDVM  124 (314)
T ss_dssp             TTCSEEEECCCC--------C---HHHHHHHH----HHHHHHHHHHHTT----CTTCEEEECCSSHHHH
T ss_pred             CCCCEEEECCCCCCCCC-CCH---HHHHHhhH----HHHHHHHHHHHHh----CCCcEEEecCCchhHH
Confidence            46899999999743321 122   23444444    3455556666543    2357888888875443

>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}

Probab=95.35  E-value=0.026  Score=49.94  Aligned_cols=38  Identities=21%  Similarity=0.342  Sum_probs=35.3

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCC
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARS   68 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~   68 (336)
                      .+++||.++|.|.++-+|+.++..|++.|++|.++.|.
T Consensus       161 i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~  198 (300)
T 4a26_A          161 IEMAGKRAVVLGRSNIVGAPVAALLMKENATVTIVHSG  198 (300)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCC
Confidence            57899999999999989999999999999999999874

>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*

Probab=95.33  E-value=0.051  Score=46.87  Aligned_cols=77  Identities=12%  Similarity=0.147  Sum_probs=55.9

Q ss_pred             EEEEeCCCChHHHHHHHHHHHC-CCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCCCc
Q 019722           37 TAIITGATSGIGAETARVLAKR-GARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLPL  115 (336)
Q Consensus        37 ~~lItGgs~gIG~aia~~L~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i  115 (336)
                      .++|.|++|.+|+.+++.+.+. ++.|+.+....+.+++...    .  +..   +.+|++.++.+...++.+.+.  ++
T Consensus         2 kV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~~dl~~~~~----~--~~D---vvIDfT~p~a~~~~~~~a~~~--g~   70 (245)
T 1p9l_A            2 RVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAGDPLSLLTD----G--NTE---VVIDFTHPDVVMGNLEFLIDN--GI   70 (245)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTTCCTHHHHH----T--TCC---EEEECSCTTTHHHHHHHHHHT--TC
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccCCCHHHHhc----c--CCc---EEEEccChHHHHHHHHHHHHc--CC
Confidence            4889999999999999999876 8887755433333332221    1  111   667999999998888887765  78


Q ss_pred             cEEEEcccC
Q 019722          116 NLLINNAGK  124 (336)
Q Consensus       116 d~lv~nAg~  124 (336)
                      ++|+...|.
T Consensus        71 ~~VigTTG~   79 (245)
T 1p9l_A           71 HAVVGTTGF   79 (245)
T ss_dssp             EEEECCCCC
T ss_pred             CEEEcCCCC
Confidence            999987774

>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A

Probab=95.31  E-value=0.024  Score=49.52  Aligned_cols=36  Identities=14%  Similarity=0.145  Sum_probs=33.9

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCC
Q 019722           33 LSSVTAIITGATSGIGAETARVLAKRGARLVLPARS   68 (336)
Q Consensus        33 l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~   68 (336)
                      ++||.++|.|+++-+|+.+++.|++.|++|.++.++
T Consensus       148 l~Gk~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~~  183 (276)
T 3ngx_A          148 YHENTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHSK  183 (276)
T ss_dssp             CCSCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT
T ss_pred             cCCCEEEEEcCChHHHHHHHHHHHHCCCeEEEEeCC
Confidence            899999999999999999999999999999998764

>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}

Probab=95.30  E-value=0.059  Score=45.76  Aligned_cols=59  Identities=14%  Similarity=0.231  Sum_probs=43.3

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccC
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDL   95 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl   95 (336)
                      ..+++||.+||.|| |.+|..-++.|++.|++|++++.+....   ++++..   ..++.++.-+.
T Consensus        26 fl~L~gk~VLVVGg-G~va~~ka~~Ll~~GA~VtVvap~~~~~---l~~l~~---~~~i~~i~~~~   84 (223)
T 3dfz_A           26 MLDLKGRSVLVVGG-GTIATRRIKGFLQEGAAITVVAPTVSAE---INEWEA---KGQLRVKRKKV   84 (223)
T ss_dssp             EECCTTCCEEEECC-SHHHHHHHHHHGGGCCCEEEECSSCCHH---HHHHHH---TTSCEEECSCC
T ss_pred             EEEcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEECCCCCHH---HHHHHH---cCCcEEEECCC
Confidence            45899999999996 5899999999999999999999765421   222222   23566665444

>2nvu_B Maltose binding protein/NEDD8-activating enzyme E1 catalytic subunit chimera; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: c.111.1.2 c.94.1.1

Probab=95.29  E-value=0.033  Score=56.68  Aligned_cols=79  Identities=18%  Similarity=0.315  Sum_probs=60.9

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCCh-------------------HHHHHHHHHHHhhCCCCceEEEec
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGA-RLVLPARSL-------------------KAAEEAKARLASDCPGSDIVVLPL   93 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~-~V~~~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~~~   93 (336)
                      ++.+|+|.| .||+|.++++.|+..|. ++.+++.+.                   .+++.+.+.+++.+|+.++..+..
T Consensus       410 ~~~~vlvvG-~GglG~~~~~~L~~~Gvg~i~l~D~d~v~~snl~rq~~~~~~~vg~~Ka~~~~~~l~~~np~~~v~~~~~  488 (805)
T 2nvu_B          410 DTCKVLVIG-AGGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPNCNVVPHFN  488 (805)
T ss_dssp             HTCCEEEEC-CSSHHHHHHHHHHTTTCCEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHSTTCEEEEEES
T ss_pred             hCCeEEEEC-CCHHHHHHHHHHHHcCCCcEEEECCCeecccccccccccchhhcCChHHHHHHHHHHHHCCCCEEEEEec
Confidence            677899988 67899999999999998 899987652                   467777888888888888888887


Q ss_pred             cCCCHHHHHHHHHHHHhcCCCccEEEEcc
Q 019722           94 DLSSLSSVRNFVSQFHSLNLPLNLLINNA  122 (336)
Q Consensus        94 Dl~~~~~v~~~~~~~~~~~~~id~lv~nA  122 (336)
                      ++.+..  ..+++       ..|+||.+.
T Consensus       489 ~~~~~~--~~~~~-------~~d~vv~~~  508 (805)
T 2nvu_B          489 KIQDFN--DTFYR-------QFHIIVCGL  508 (805)
T ss_dssp             CGGGSC--HHHHH-------TCSEEEECC
T ss_pred             cccccH--HHHHh-------cCCEEEECC
Confidence            776532  23332       578988774

>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A

Probab=95.26  E-value=0.26  Score=43.96  Aligned_cols=117  Identities=17%  Similarity=0.179  Sum_probs=73.3

Q ss_pred             EEEEeCCCChHHHHHHHHHHHCC--CEEEEeeCChHHHHHHHHHHHhhCC-CCceEEEeccCCCHHHHHHHHHHHHhcCC
Q 019722           37 TAIITGATSGIGAETARVLAKRG--ARLVLPARSLKAAEEAKARLASDCP-GSDIVVLPLDLSSLSSVRNFVSQFHSLNL  113 (336)
Q Consensus        37 ~~lItGgs~gIG~aia~~L~~~G--~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  113 (336)
                      .+.|+|+ |.+|.+++..|+.++  .+|+++++++++++.....+....+ ...+.+.. +  +.+.           +.
T Consensus         2 KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~k~~g~a~dl~~~~~~~~~~~v~~-~--~~~a-----------~~   66 (310)
T 2xxj_A            2 KVGIVGS-GMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHATPFAHPVWVWA-G--SYGD-----------LE   66 (310)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHTTGGGSCCCEEEE-C--CGGG-----------GT
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHHhHhhcCCeEEEE-C--CHHH-----------hC
Confidence            5788997 999999999999988  4899999999888766666654311 11223222 2  1111           23


Q ss_pred             CccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccc
Q 019722          114 PLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHS  180 (336)
Q Consensus       114 ~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~  180 (336)
                      ..|++|..+|....+ ..+.   ...+..|.    .+++...+.+.+..    +.+.||++|.+...
T Consensus        67 ~aD~Vii~ag~~~~~-g~~r---~dl~~~n~----~i~~~i~~~i~~~~----p~a~iiv~tNPv~~  121 (310)
T 2xxj_A           67 GARAVVLAAGVAQRP-GETR---LQLLDRNA----QVFAQVVPRVLEAA----PEAVLLVATNPVDV  121 (310)
T ss_dssp             TEEEEEECCCCCCCT-TCCH---HHHHHHHH----HHHHHHHHHHHHHC----TTCEEEECSSSHHH
T ss_pred             CCCEEEECCCCCCCC-CcCH---HHHHHhhH----HHHHHHHHHHHHHC----CCcEEEEecCchHH
Confidence            689999999975432 1222   12333343    34555555555442    25788888776544

>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}

Probab=95.26  E-value=0.022  Score=50.05  Aligned_cols=39  Identities=23%  Similarity=0.325  Sum_probs=35.5

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCC
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARS   68 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~   68 (336)
                      ..+++||.++|.|.++-+|+.++..|+..|++|.++.+.
T Consensus       156 ~i~l~Gk~vvVvGrs~iVG~plA~lL~~~gAtVtv~hs~  194 (286)
T 4a5o_A          156 GADLYGMDAVVVGASNIVGRPMALELLLGGCTVTVTHRF  194 (286)
T ss_dssp             TCCCTTCEEEEECTTSTTHHHHHHHHHHTTCEEEEECTT
T ss_pred             CCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCC
Confidence            357899999999999999999999999999999998764

>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}

Probab=95.25  E-value=0.19  Score=44.70  Aligned_cols=116  Identities=20%  Similarity=0.194  Sum_probs=63.6

Q ss_pred             EEEEeCCCChHHHHHHHHHHHCCC--EEEEeeCChHHHHHHHHHHHhhCC-CCceEEEeccCCCHHHHHHHHHHHHhcCC
Q 019722           37 TAIITGATSGIGAETARVLAKRGA--RLVLPARSLKAAEEAKARLASDCP-GSDIVVLPLDLSSLSSVRNFVSQFHSLNL  113 (336)
Q Consensus        37 ~~lItGgs~gIG~aia~~L~~~G~--~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  113 (336)
                      .+.|+|+ |.+|..++..|+.+|.  +|+++++++++++.....+....+ .....+.. +  +.+           .+.
T Consensus         2 kI~VIGa-G~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~l~~~~~~~~~~~i~~-~--~~~-----------a~~   66 (304)
T 2v6b_A            2 KVGVVGT-GFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDIAHAAPVSHGTRVWH-G--GHS-----------ELA   66 (304)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHTTSCCTTSCCEEEE-E--CGG-----------GGT
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHhhhhhhhhcCCeEEEE-C--CHH-----------HhC
Confidence            5778897 9999999999999998  999999998877654555433211 01122211 1  111           123


Q ss_pred             CccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCcc
Q 019722          114 PLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIH  179 (336)
Q Consensus       114 ~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~  179 (336)
                      ..|++|.++|....+. .+.   .+.+..|..    +.+.+.+.+.+..    +++.+|++|.+..
T Consensus        67 ~aDvVIi~~~~~~~~g-~~r---~dl~~~n~~----i~~~i~~~i~~~~----p~~~vi~~tNP~~  120 (304)
T 2v6b_A           67 DAQVVILTAGANQKPG-ESR---LDLLEKNAD----IFRELVPQITRAA----PDAVLLVTSNPVD  120 (304)
T ss_dssp             TCSEEEECC----------------CHHHHHH----HHHHHHHHHHHHC----SSSEEEECSSSHH
T ss_pred             CCCEEEEcCCCCCCCC-CcH---HHHHHhHHH----HHHHHHHHHHHhC----CCeEEEEecCchH
Confidence            6799999998643321 111   123344433    4444444444431    2466777666543

>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}

Probab=95.24  E-value=0.3  Score=40.48  Aligned_cols=77  Identities=9%  Similarity=-0.017  Sum_probs=54.3

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCC
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNL  113 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  113 (336)
                      .+.++|-.|++.|.   ++..|++++.+|+.++.+++.++.+.+.++......++.++..|+.+.          ....+
T Consensus        55 ~~~~vLDlGcG~G~---~~~~la~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~----------~~~~~  121 (204)
T 3njr_A           55 RGELLWDIGGGSGS---VSVEWCLAGGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAA----------LADLP  121 (204)
T ss_dssp             TTCEEEEETCTTCH---HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGG----------GTTSC
T ss_pred             CCCEEEEecCCCCH---HHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhh----------cccCC
Confidence            46788988887653   344455558899999999998887777766543233799999998652          11234


Q ss_pred             CccEEEEccc
Q 019722          114 PLNLLINNAG  123 (336)
Q Consensus       114 ~id~lv~nAg  123 (336)
                      .+|+++.+.+
T Consensus       122 ~~D~v~~~~~  131 (204)
T 3njr_A          122 LPEAVFIGGG  131 (204)
T ss_dssp             CCSEEEECSC
T ss_pred             CCCEEEECCc
Confidence            6899997763

>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*

Probab=95.19  E-value=0.36  Score=43.03  Aligned_cols=116  Identities=15%  Similarity=0.111  Sum_probs=66.2

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhh----CCCCceEEEeccCCCHHHHHHHHHHHHh
Q 019722           36 VTAIITGATSGIGAETARVLAKRGA-RLVLPARSLKAAEEAKARLASD----CPGSDIVVLPLDLSSLSSVRNFVSQFHS  110 (336)
Q Consensus        36 k~~lItGgs~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~----~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  110 (336)
                      +.+.|+|+ |.+|..++..|+..|. +|+++++++++++.....+...    ....++... .|   .+           
T Consensus         3 ~kI~VIGa-G~vG~~~a~~la~~g~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t-~d---~~-----------   66 (309)
T 1ur5_A            3 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGT-NN---YA-----------   66 (309)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEE-SC---GG-----------
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCCccHHHHHHHhHHHhHhhcCCCeEEEEC-CC---HH-----------
Confidence            46889998 9999999999999996 9999999987776544444431    112233322 12   11           


Q ss_pred             cCCCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCcc
Q 019722          111 LNLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIH  179 (336)
Q Consensus       111 ~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~  179 (336)
                      .+...|++|.++|....+. .+..   ..+..|    ..+.+.+.+.+.+..    +.+.++++|.+..
T Consensus        67 a~~~aD~Vi~a~g~p~~~g-~~r~---dl~~~n----~~i~~~i~~~i~~~~----p~a~vi~~tNPv~  123 (309)
T 1ur5_A           67 DTANSDVIVVTSGAPRKPG-MSRE---DLIKVN----ADITRACISQAAPLS----PNAVIIMVNNPLD  123 (309)
T ss_dssp             GGTTCSEEEECCCC---------C---HHHHHH----HHHHHHHHHHHGGGC----TTCEEEECCSSHH
T ss_pred             HHCCCCEEEEcCCCCCCCC-CCHH---HHHHHH----HHHHHHHHHHHHhhC----CCeEEEEcCCchH
Confidence            1236799999999744321 1111   122222    234455555554432    2456666655443

>3aoe_E Glutamate dehydrogenase; rossmann fold, NADH, oxidoreductase; 2.60A {Thermus thermophilus}

Probab=95.15  E-value=0.0085  Score=55.79  Aligned_cols=47  Identities=19%  Similarity=0.299  Sum_probs=39.0

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEE-EeeC----------ChHHHHHHHHH
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGARLV-LPAR----------SLKAAEEAKAR   78 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~-~~~r----------~~~~~~~~~~~   78 (336)
                      .+++||+++|+| .|.+|..+++.|.+.|++|+ +.++          +.+.+.+..++
T Consensus       214 ~~l~gk~vaVqG-~GnVG~~~a~~L~~~GakVVavsD~~G~i~dp~Gld~~~l~~~~~~  271 (419)
T 3aoe_E          214 LDLRGARVVVQG-LGQVGAAVALHAERLGMRVVAVATSMGGMYAPEGLDVAEVLSAYEA  271 (419)
T ss_dssp             CCCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEEETTEEEECTTCCCHHHHHHHHHH
T ss_pred             CCccCCEEEEEC-cCHHHHHHHHHHHHCCCEEEEEEcCCCeEECCCCCCHHHHHHHHHh
Confidence            379999999998 89999999999999999988 7777          55666555543

>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1

Probab=95.15  E-value=0.22  Score=44.69  Aligned_cols=118  Identities=19%  Similarity=0.157  Sum_probs=65.9

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHCCC--EEEEeeCChHHHHHHHHHHHhhCC-CCceEEEeccCCCHHHHHHHHHHHHhcC
Q 019722           36 VTAIITGATSGIGAETARVLAKRGA--RLVLPARSLKAAEEAKARLASDCP-GSDIVVLPLDLSSLSSVRNFVSQFHSLN  112 (336)
Q Consensus        36 k~~lItGgs~gIG~aia~~L~~~G~--~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  112 (336)
                      ..+.|+|+ |.+|..++..|+.+|.  +|++++.++++++.....+....+ ...+.+. .  .+           .+.+
T Consensus         8 ~KI~IiGa-G~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~-~--~~-----------~~a~   72 (318)
T 1y6j_A            8 SKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLY-A--GD-----------YSDV   72 (318)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC-----C-----------GGGG
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHhHHhcCCeEEE-E--CC-----------HHHh
Confidence            46778887 9999999999999997  899999998776655555543211 0122211 1  11           1113


Q ss_pred             CCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccc
Q 019722          113 LPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHS  180 (336)
Q Consensus       113 ~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~  180 (336)
                      ...|++|.++|....+ ..+   -.+.+..|+.    .++.+.+.+.+..    +.+.||++|.+.+.
T Consensus        73 ~~aDvVii~~g~p~k~-g~~---r~dl~~~n~~----i~~~i~~~i~~~~----p~a~viv~tNPv~~  128 (318)
T 1y6j_A           73 KDCDVIVVTAGANRKP-GET---RLDLAKKNVM----IAKEVTQNIMKYY----NHGVILVVSNPVDI  128 (318)
T ss_dssp             TTCSEEEECCCC-------C---HHHHHHHHHH----HHHHHHHHHHHHC----CSCEEEECSSSHHH
T ss_pred             CCCCEEEEcCCCCCCC-CcC---HHHHHHhhHH----HHHHHHHHHHHhC----CCcEEEEecCcHHH
Confidence            4689999999974322 111   1234455544    3444444444432    25777777665443

>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}

Probab=95.15  E-value=0.22  Score=45.45  Aligned_cols=87  Identities=17%  Similarity=0.261  Sum_probs=55.8

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHH----------HHHhhCCCCceEEEeccCCCHHHHHH
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKA----------RLASDCPGSDIVVLPLDLSSLSSVRN  103 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~----------~l~~~~~~~~~~~~~~Dl~~~~~v~~  103 (336)
                      +++++.|.| .|.+|..+++.|++.|++|++.+|++++.+.+.+          ++.+.....++.++.  +.+. .++.
T Consensus        21 ~~mkIgiIG-lG~mG~~~A~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~~a~~~DvVi~~--vp~~-~v~~   96 (358)
T 4e21_A           21 QSMQIGMIG-LGRMGADMVRRLRKGGHECVVYDLNVNAVQALEREGIAGARSIEEFCAKLVKPRVVWLM--VPAA-VVDS   96 (358)
T ss_dssp             -CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCBCCSSHHHHHHHSCSSCEEEEC--SCGG-GHHH
T ss_pred             cCCEEEEEC-chHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHCCCEEeCCHHHHHhcCCCCCEEEEe--CCHH-HHHH
Confidence            456788887 7999999999999999999999999987765432          111111111444443  2223 6666


Q ss_pred             HHHHHHhcCCCccEEEEcccC
Q 019722          104 FVSQFHSLNLPLNLLINNAGK  124 (336)
Q Consensus       104 ~~~~~~~~~~~id~lv~nAg~  124 (336)
                      +++.+.....+=+++|.+...
T Consensus        97 vl~~l~~~l~~g~iiId~st~  117 (358)
T 4e21_A           97 MLQRMTPLLAANDIVIDGGNS  117 (358)
T ss_dssp             HHHHHGGGCCTTCEEEECSSC
T ss_pred             HHHHHHhhCCCCCEEEeCCCC
Confidence            777766654444566665543

>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}

Probab=95.13  E-value=0.022  Score=50.05  Aligned_cols=38  Identities=18%  Similarity=0.249  Sum_probs=34.8

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCC
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARS   68 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~   68 (336)
                      -+++||.++|.|.++-+|+.++..|+.+|++|.++.|+
T Consensus       157 i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~  194 (285)
T 3l07_A          157 IKTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRF  194 (285)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT
T ss_pred             CCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCC
Confidence            47899999999999989999999999999999988754

>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6

Probab=95.12  E-value=0.25  Score=43.00  Aligned_cols=82  Identities=22%  Similarity=0.240  Sum_probs=51.6

Q ss_pred             EEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHH---------HHhhCCCCceEEEeccCCCHHHHHHHHHH
Q 019722           37 TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKAR---------LASDCPGSDIVVLPLDLSSLSSVRNFVSQ  107 (336)
Q Consensus        37 ~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~---------l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~  107 (336)
                      ++.|.| .|.+|.++++.|++.|++|++++|++++.+...+.         +... .+..+.++.   ..+..+..++++
T Consensus         2 ~i~iiG-~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~D~vi~a---v~~~~~~~~~~~   76 (279)
T 2f1k_A            2 KIGVVG-LGLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQLVDEAGQDLSLL-QTAKIIFLC---TPIQLILPTLEK   76 (279)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTSCSEEESCGGGG-TTCSEEEEC---SCHHHHHHHHHH
T ss_pred             EEEEEc-CcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhCCCCccccCCHHHh-CCCCEEEEE---CCHHHHHHHHHH
Confidence            467888 79999999999999999999999998877654321         0000 122333332   234566777777


Q ss_pred             HHhcCCCccEEEEccc
Q 019722          108 FHSLNLPLNLLINNAG  123 (336)
Q Consensus       108 ~~~~~~~id~lv~nAg  123 (336)
                      +.....+=.++++.++
T Consensus        77 l~~~~~~~~~vv~~~~   92 (279)
T 2f1k_A           77 LIPHLSPTAIVTDVAS   92 (279)
T ss_dssp             HGGGSCTTCEEEECCS
T ss_pred             HHhhCCCCCEEEECCC
Confidence            7654432234555433

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	336
d1wmaa1	275	c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydrox	1e-43
d1xg5a_	257	c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC41	4e-43
d1yo6a1	250	c.2.1.2 (A:1-250) Putative carbonyl reductase snif	5e-38
d1yb1a_	244	c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase	8e-37
d2gdza1	254	c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrog	8e-37
d1ydea1	250	c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase	2e-35
d1sbya1	254	c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase	5e-35
d1spxa_	264	c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nemato	5e-34
d1hxha_	253	c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydroge	4e-32
d1zk4a1	251	c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase	5e-32
d2d1ya1	248	c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {T	2e-31
d1h5qa_	260	c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Aga	8e-31
d2ew8a1	247	c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenas	8e-31
d1hdca_	254	c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydr	2e-30
d2ae2a_	259	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	2e-30
d1xhla_	274	c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorh	5e-30
d1xkqa_	272	c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorh	6e-30
d1xu9a_	269	c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase	6e-30
d1yxma1	297	c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA re	7e-29
d1xq1a_	259	c.2.1.2 (A:) Tropinone reductase {Thale cress (Ara	7e-29
d1oaaa_	259	c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus mus	1e-27
d1cyda_	242	c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus muscul	1e-27
d1vl8a_	251	c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga	2e-27
d1pr9a_	244	c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapie	6e-27
d1bdba_	276	c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehy	2e-26
d2bgka1	268	c.2.1.2 (A:11-278) Rhizome secoisolariciresinol de	3e-26
d1zmta1	252	c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Ag	3e-26
d1gz6a_	302	c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase do	6e-26
d1nffa_	244	c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycob	2e-25
d1iy8a_	258	c.2.1.2 (A:) Levodione reductase {Corynebacterium	4e-25
d2c07a1	251	c.2.1.2 (A:54-304) beta-keto acyl carrier protein	8e-25
d1ulsa_	242	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	2e-24
d2bd0a1	240	c.2.1.2 (A:2-241) Bacterial sepiapterin reductase	3e-24
d1ja9a_	259	c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reduc	3e-24
d1geea_	261	c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megat	4e-24
d1ae1a_	258	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	9e-24
d2rhca1	257	c.2.1.2 (A:5-261) beta-keto acyl carrier protein r	1e-23
d1fmca_	255	c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase	1e-23
d1w6ua_	294	c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondr	2e-23
d2ag5a1	245	c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR fami	3e-23
d2a4ka1	241	c.2.1.2 (A:2-242) beta-keto acyl carrier protein r	4e-23
d1x1ta1	260	c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydroge	5e-23
d1jtva_	285	c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroi	8e-23
d1zema1	260	c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconoba	1e-22
d1edoa_	244	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	1e-22
d1snya_	248	c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly	2e-22
d1g0oa_	272	c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase	3e-22
d1q7ba_	243	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	4e-22
d1gega_	255	c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Kl	9e-22
d1mxha_	266	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	6e-21
d1dhra_	236	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	1e-20
d1k2wa_	256	c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter s	1e-20
d1uzma1	237	c.2.1.2 (A:9-245) beta-keto acyl carrier protein r	5e-20
d1uaya_	241	c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogena	2e-19
d2o23a1	248	c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydr	8e-19
d1ooea_	235	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	5e-18
d1o5ia_	234	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	9e-16
d1ulua_	256	c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermoph	1e-15
d1qsga_	258	c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli	7e-15
d1fjha_	257	c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase	1e-13
d1e7wa_	284	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	8e-12
d2fr1a1	259	c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI	6e-10
d1luaa1	191	c.2.1.7 (A:98-288) Methylene-tetrahydromethanopter	2e-09
d2pd4a1	274	c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacte	2e-08
d2h7ma1	268	c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacteri	2e-08
d1d7oa_	297	c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (B	4e-08
d1uh5a_	329	c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite	5e-08
d1jaya_	212	c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase	2e-07
d1kewa_	361	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	1e-06
d1y1pa1	342	c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolo	5e-04
d1rpna_	321	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomo	5e-04
d1xgka_	350	c.2.1.2 (A:) Negative transcriptional regulator Nm	6e-04
d1db3a_	357	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric	7e-04
d1qyda_	312	c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {	7e-04

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 275

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  149 bits (376), Expect = 1e-43
 Identities = 65/293 (22%), Positives = 110/293 (37%), Gaps = 54/293 (18%)

Query: 38  AIITGATSGIGAETARVLAKR-GARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLS 96
           A++TG   GIG    R L +     +VL AR +   + A  +L ++  G       LD+ 
Sbjct: 6   ALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAE--GLSPRFHQLDID 63

Query: 97  SLSSVRNFVSQFHSLNLPLNLLINNAG--KFAHQHAISEDGIEMTFATNYLGHFLLTKLL 154
            L S+R            L++L+NNAG               E+T  TN+ G   +   L
Sbjct: 64  DLQSIRALRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTEL 123

Query: 155 LKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSH--------------- 199
           L  +         QGR+VNVSS +           L Q  R+++                
Sbjct: 124 LPLIKP-------QGRVVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKFVED 176

Query: 200 ---------YDATRAYALSKLANVLHTKELAQRLKQMEA--NVTVNCVHPGIVRTRLTRE 248
                       + AY ++K+   + ++  A++L +      + +N   PG VRT +   
Sbjct: 177 TKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGP 236

Query: 249 REGFITDLVFFLTSKLLKTIPQGAATTCYVAIHPRLVN-VSGKYFADCN-EAW 299
           +                K+  +GA T  Y+A+ P       G++ ++   E W
Sbjct: 237 K--------------ATKSPEEGAETPVYLALLPPDAEGPHGQFVSEKRVEQW 275

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  147 bits (372), Expect = 4e-43
 Identities = 57/237 (24%), Positives = 97/237 (40%), Gaps = 27/237 (11%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLS 96
            A++TGA+ GIGA  AR L ++G ++V  AR++   EE  A   S      ++    DLS
Sbjct: 12  LALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLS 71

Query: 97  SLSSVRNFVSQFHSLNLPLNLLINNAG--KFAHQHAISEDGIEMTFATNYLGHFLLTKLL 154
           +   + +  S   S +  +++ INNAG  +     + S  G +  F  N L   + T+  
Sbjct: 72  NEEDILSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREA 131

Query: 155 LKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLANV 214
            + M E        G I+N++S                          T  Y+ +K A  
Sbjct: 132 YQSMKERNVD---DGHIININSMSGHRVLP---------------LSVTHFYSATKYAVT 173

Query: 215 LHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSKLLKTIPQG 271
             T+ L Q L++ + ++   C+ PG+V T+   +      +       K   T  Q 
Sbjct: 174 ALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDKDPE-------KAAATYEQM 223

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

 Score =  133 bits (336), Expect = 5e-38
 Identities = 63/270 (23%), Positives = 102/270 (37%), Gaps = 33/270 (12%)

Query: 37  TAIITGATSGIGAETARVLAKRGA--RLVLPARSLKAAEEAKARLASDCPGSDIVVLPLD 94
           + ++TGA  GIG    + L K      ++  AR ++ A E K+        S + VLPL 
Sbjct: 5   SVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIK-----DSRVHVLPLT 59

Query: 95  LSSLSSVRNFVSQFHSL--NLPLNLLINNAGKFAHQHAI---SEDGIEMTFATNYLGHFL 149
           ++   S+  FVS+   +  +  L+LLINNAG           +   I      N     L
Sbjct: 60  VTCDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVL 119

Query: 150 LTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALS 209
           LT+ LL  +    K    +     +S S  +  +          + + S      AY +S
Sbjct: 120 LTQKLLPLL----KNAASKESGDQLSVSRAAVITISSGLGSITDNTSGSAQFPVLAYRMS 175

Query: 210 KLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSKLLKTIP 269
           K A  +  + LA  LK  + NV V    PG V+T L  +                  T+ 
Sbjct: 176 KAAINMFGRTLAVDLK--DDNVLVVNFCPGWVQTNLGGKNAAL--------------TVE 219

Query: 270 QGAATTCYVAIHPRLVNVSGKYFADCNEAW 299
           Q  A            + +G++F    + +
Sbjct: 220 QSTAELISSFNKLDN-SHNGRFFMRNLKPY 248

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  130 bits (328), Expect = 8e-37
 Identities = 56/221 (25%), Positives = 87/221 (39%), Gaps = 27/221 (12%)

Query: 32  NLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVL 91
           +++    +ITGA  GIG  TA   AK  ++LVL   +    EE  A+      G+ +   
Sbjct: 4   SVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGL--GAKVHTF 61

Query: 92  PLDLSSLSSVRNFVSQFHSLNLPLNLLINNA--GKFAHQHAISEDGIEMTFATNYLGHFL 149
            +D S+   + +   +  +    +++L+NNA     +   A  +  IE TF  N L HF 
Sbjct: 62  VVDCSNREDIYSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFW 121

Query: 150 LTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALS 209
            TK  L  M +        G IV V+S+        ++                 AY  S
Sbjct: 122 TTKAFLPAMTKNNH-----GHIVTVASAAGHVSVPFLL-----------------AYCSS 159

Query: 210 KLANVLHTKELAQRLKQMEA-NVTVNCVHPGIVRTRLTRER 249
           K A V   K L   L  ++   V   C+ P  V T   +  
Sbjct: 160 KFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKNP 200

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  130 bits (329), Expect = 8e-37
 Identities = 51/212 (24%), Positives = 80/212 (37%), Gaps = 25/212 (11%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLS 96
            A++TGA  GIG   A  L  +GA++ L   +L+A  + KA L         + +  D++
Sbjct: 5   VALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVA 64

Query: 97  SLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLK 156
               +R+   +       L++L+NNAG    ++       E T   N +     T L L 
Sbjct: 65  DQQQLRDTFRKVVDHFGRLDILVNNAGVNNEKN------WEKTLQINLVSVISGTYLGLD 118

Query: 157 KMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLANVLH 216
            M +     G  G I+N+SS                             Y  SK   V  
Sbjct: 119 YMSKQNGGEG--GIIINMSSLAGLMPVAQQP-----------------VYCASKHGIVGF 159

Query: 217 TKELAQRLKQMEANVTVNCVHPGIVRTRLTRE 248
           T+  A     M + V +N + PG V T +   
Sbjct: 160 TRSAALAANLMNSGVRLNAICPGFVNTAILES 191

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  127 bits (320), Expect = 2e-35
 Identities = 56/238 (23%), Positives = 87/238 (36%), Gaps = 35/238 (14%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLS 96
             ++TG   GIGA   R     GAR+V+  +        +  L         V +  D++
Sbjct: 8   VVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQEL------PGAVFILCDVT 61

Query: 97  SLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAI---SEDGIEMTFATNYLGHFLLTKL 153
               V+  VS+       L+ ++NNAG           S  G       N LG + LTKL
Sbjct: 62  QEDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKL 121

Query: 154 LLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLAN 213
            L  + ++      QG ++N+SS + +      +                  Y  +K A 
Sbjct: 122 ALPYLRKS------QGNVINISSLVGAIGQAQAV-----------------PYVATKGAV 158

Query: 214 VLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSKLLKTIPQG 271
              TK LA         V VNC+ PG + T L  E    + D    +  + +   P G
Sbjct: 159 TAMTKALALDESPY--GVRVNCISPGNIWTPLWEELAALMPDPRASI-REGMLAQPLG 213

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

 Score =  126 bits (317), Expect = 5e-35
 Identities = 50/222 (22%), Positives = 82/222 (36%), Gaps = 29/222 (13%)

Query: 32  NLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVL 91
           +L++   I   A  GIG +T+R L KR  +  +    ++      A L +  P  +I   
Sbjct: 2   DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTAL-AELKAINPKVNITFH 60

Query: 92  PLDLS-SLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLL 150
             D++  ++  +  + +       +++LIN AG         +  IE T A N+ G    
Sbjct: 61  TYDVTVPVAESKKLLKKIFDQLKTVDILINGAGIL------DDHQIERTIAINFTGLVNT 114

Query: 151 TKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSK 210
           T  +L    +     G  G I N+ S         +                   Y+ SK
Sbjct: 115 TTAILDFWDKRKGGPG--GIIANICSVTGFNAIHQVP-----------------VYSASK 155

Query: 211 LANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGF 252
            A V  T  LA+        VT   ++PGI RT L      +
Sbjct: 156 AAVVSFTNSLAKLAPIT--GVTAYSINPGITRTPLVHTFNSW 195

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 264

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score =  123 bits (311), Expect = 5e-34
 Identities = 51/220 (23%), Positives = 90/220 (40%), Gaps = 31/220 (14%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARL-ASDCPGSDIVVLPLDL 95
            AIITG+++GIG  TA + A+ GA++ +  R  +  EE + ++ A+     ++  +  D+
Sbjct: 7   VAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADV 66

Query: 96  SSLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQ------HAISEDGIEMTFATNYLGHFL 149
           ++ +     +S        L++L+NNAG            A S +  + T   N      
Sbjct: 67  TTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIA 126

Query: 150 LTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALS 209
           LTK  +  +         +G IVN+SS      +                      Y+++
Sbjct: 127 LTKKAVPHLSS------TKGEIVNISSIASGLHATPDF----------------PYYSIA 164

Query: 210 KLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRER 249
           K A   +T+  A  L Q    + VN + PG+V T      
Sbjct: 165 KAAIDQYTRNTAIDLIQH--GIRVNSISPGLVATGFGSAM 202

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 253

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score =  118 bits (297), Expect = 4e-32
 Identities = 45/214 (21%), Positives = 81/214 (37%), Gaps = 30/214 (14%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLS 96
            A++TG  SG+G E  ++L   GA++     +  A ++  A L     G   + +  D+S
Sbjct: 8   VALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL-----GERSMFVRHDVS 62

Query: 97  SLSSVRNFVSQFHSLNLPLNLLINNAG--KFAHQHAISEDGIEMTFATNYLGHFLLTKLL 154
           S +     ++        LN+L+NNAG            +        N    F+  +  
Sbjct: 63  SEADWTLVMAAVQRRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQG 122

Query: 155 LKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLANV 214
           +  M E        G I+N+ +S+ SW                   +    Y+ SK A  
Sbjct: 123 IAAMKE------TGGSIINM-ASVSSWLP----------------IEQYAGYSASKAAVS 159

Query: 215 LHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRE 248
             T+  A   ++    + VN +HP  + T + + 
Sbjct: 160 ALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQA 193

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

 Score =  118 bits (296), Expect = 5e-32
 Identities = 53/217 (24%), Positives = 80/217 (36%), Gaps = 26/217 (11%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLS 96
            AIITG T GIG   A    + GA++++  R     E+A   + +      I     D S
Sbjct: 8   VAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGT---PDQIQFFQHDSS 64

Query: 97  SLSSVRNFVSQFHSLNLPLNLLINNAG--KFAHQHAISEDGIEMTFATNYLGHFLLTKLL 154
                            P++ L+NNAG          +        A N  G F  T+L 
Sbjct: 65  DEDGWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLG 124

Query: 155 LKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLANV 214
           +++M       G+   I+N+SS         +                  AY  SK A  
Sbjct: 125 IQRMKN----KGLGASIINMSSIEGFVGDPSLG-----------------AYNASKGAVR 163

Query: 215 LHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREG 251
           + +K  A      + +V VN VHPG ++T L  +  G
Sbjct: 164 IMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLPG 200

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

 Score =  116 bits (292), Expect = 2e-31
 Identities = 44/237 (18%), Positives = 70/237 (29%), Gaps = 35/237 (14%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLS 96
             ++TG   GIG   A+  A+ GA + L     +  E A+A   +           +DL 
Sbjct: 7   GVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEVAEAIGGA--------FFQVDLE 58

Query: 97  SLSSVRNFVSQFHSLNLPLNLLINNAG--KFAHQHAISEDGIEMTFATNYLGHFLLTKLL 154
                  FV +       +++L+NNA          +           N      L+ L 
Sbjct: 59  DERERVRFVEEAAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALA 118

Query: 155 LKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLANV 214
            ++M +           +   +S+   F+                     AY  SK   V
Sbjct: 119 AREMRKVGG------GAIVNVASVQGLFAEQE----------------NAAYNASKGGLV 156

Query: 215 LHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSKLLKTIPQG 271
             T+ LA  L      + VN V PG + T    E      D                
Sbjct: 157 NLTRSLALDLA--PLRIRVNAVAPGAIATEAVLEAIALSPDPERTR-RDWEDLHALR 210

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

 Score =  115 bits (288), Expect = 8e-31
 Identities = 55/242 (22%), Positives = 86/242 (35%), Gaps = 26/242 (10%)

Query: 32  NLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVL 91
           +  + T I+TG   GIG    R +A  GA + +  RS   A E   ++  +  G      
Sbjct: 6   SFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEF-GVKTKAY 64

Query: 92  PLDLSSLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHA--ISEDGIEMTFATNYLGHFL 149
             D+S+   V   + Q  +   P++ LI NAG    + A  ++ +     +  N  G F 
Sbjct: 65  QCDVSNTDIVTKTIQQIDADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFN 124

Query: 150 LTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALS 209
             + + K  ++  +    +G IV  SS      +   +                  Y  S
Sbjct: 125 TCRAVAKLWLQKQQ----KGSIVVTSSMSSQIINQSSLNGSLTQV----------FYNSS 170

Query: 210 KLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSKLLKTIP 269
           K A     K LA       A + VN + PG V T  T   +  I D            IP
Sbjct: 171 KAACSNLVKGLAAEWA--SAGIRVNALSPGYVNTDQTAHMDKKIRD-------HQASNIP 221

Query: 270 QG 271
             
Sbjct: 222 LN 223

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} Length = 247

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

 Score =  114 bits (287), Expect = 8e-31
 Identities = 54/214 (25%), Positives = 83/214 (38%), Gaps = 30/214 (14%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLS 96
            A+ITG  +GIG   A   A  GA + +         EA  R      G  ++ +  D+S
Sbjct: 7   LAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNL----GRRVLTVKCDVS 62

Query: 97  SLSSVRNFVSQFHSLNLPLNLLINNAG--KFAHQHAISEDGIEMTFATNYLGHFLLTKLL 154
               V  F  Q  S     ++L+NNAG         ++ +  + TF  N    FL+ K  
Sbjct: 63  QPGDVEAFGKQVISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAF 122

Query: 155 LKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLANV 214
           +  M          GRI+N++S+ +                          Y  +K AN+
Sbjct: 123 VPGMKRNGW-----GRIINLTSTTYWLKIEAYT-----------------HYISTKAANI 160

Query: 215 LHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRE 248
             T+ LA  L   +  +TVN + P +VRT  T  
Sbjct: 161 GFTRALASDLG--KDGITVNAIAPSLVRTATTEA 192

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

 Score =  114 bits (286), Expect = 2e-30
 Identities = 55/219 (25%), Positives = 78/219 (35%), Gaps = 31/219 (14%)

Query: 32  NLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVL 91
           +LS  T IITG   G+GAE AR     GAR+VL     +        L     G      
Sbjct: 2   DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL-----GDAARYQ 56

Query: 92  PLDLSSLSSVRNFVSQFHSLNLPLNLLINNAGKF--AHQHAISEDGIEMTFATNYLGHFL 149
            LD++     +  V+        ++ L+NNAG          S +        N  G F+
Sbjct: 57  HLDVTIEEDWQRVVAYAREEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFI 116

Query: 150 LTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALS 209
             K ++  M +        G IVN+SS+                           +Y  S
Sbjct: 117 GMKTVIPAMKDAGG-----GSIVNISSAAGLMGLALTS-----------------SYGAS 154

Query: 210 KLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRE 248
           K      +K  A  L      + VN VHPG+  T +T E
Sbjct: 155 KWGVRGLSKLAAVELGTD--RIRVNSVHPGMTYTPMTAE 191

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

 Score =  114 bits (286), Expect = 2e-30
 Identities = 50/243 (20%), Positives = 88/243 (36%), Gaps = 31/243 (12%)

Query: 32  NLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVL 91
           NL   TA++TG + GIG      LA  GA +   +R+ K   +   +  S   G  +   
Sbjct: 5   NLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSK--GFKVEAS 62

Query: 92  PLDLSSLSSVRNFVSQFHS-LNLPLNLLINNAG--KFAHQHAISEDGIEMTFATNYLGHF 148
             DLSS S  +  ++   +  +  LN+L+NNAG   +      + +   +  + N+   +
Sbjct: 63  VCDLSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAY 122

Query: 149 LLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYAL 208
            L+ L    +  + +   +        SS+    +                      Y  
Sbjct: 123 HLSVLAHPFLKASERGNVVF------ISSVSGALAVPYEAV----------------YGA 160

Query: 209 SKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSKLLKTI 268
           +K A    T+ LA    +   N+ VN V PG++ T L                +KL+   
Sbjct: 161 TKGAMDQLTRCLAFEWAKD--NIRVNGVGPGVIATSLVEMT--IQDPEQKENLNKLIDRC 216

Query: 269 PQG 271
              
Sbjct: 217 ALR 219

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

 Score =  113 bits (283), Expect = 5e-30
 Identities = 52/242 (21%), Positives = 90/242 (37%), Gaps = 31/242 (12%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARL-ASDCPGSDIVVLPLDL 95
           + IITG+++GIG   A + AK GA++ +  R+    EE K ++  +  P   I  +  D+
Sbjct: 6   SVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADV 65

Query: 96  SSLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHA----ISEDGIEMTFATNYLGHFLLT 151
           +  S   + ++   +    +++L+NNAG              +  + TF  N+     +T
Sbjct: 66  TEASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMT 125

Query: 152 KLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKL 211
           +                          H   +   I  +  I      +     YA +K 
Sbjct: 126 QKT----------------------KEHLIKTKGEIVNVSSIVAGPQAHSGYPYYACAKA 163

Query: 212 ANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRER--EGFITDLVFFLTSKLLKTIP 269
           A   +T+  A  L Q    V VN V PG V T            +D ++       + IP
Sbjct: 164 ALDQYTRCTAIDLIQH--GVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIP 221

Query: 270 QG 271
            G
Sbjct: 222 VG 223

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

 Score =  113 bits (283), Expect = 6e-30
 Identities = 54/226 (23%), Positives = 90/226 (39%), Gaps = 31/226 (13%)

Query: 31  PNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARL-ASDCPGSDIV 89
           P  S+ T IITG+++GIG  TA + A+ GA + +  RS +  EE +  +  S      + 
Sbjct: 1   PRFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVN 60

Query: 90  VLPLDLSSLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQ------HAISEDGIEMTFATN 143
            +  D+++       ++        +++L+NNAG                D    T   N
Sbjct: 61  SVVADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLN 120

Query: 144 YLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDAT 203
                 +TK +   ++        +G IVNVSS +    +     Y              
Sbjct: 121 LQAVIEMTKKVKPHLVA------SKGEIVNVSSIVAGPQAQPDFLY-------------- 160

Query: 204 RAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRER 249
             YA++K A   +T+  A  L   +  + VN V PG+V T  T   
Sbjct: 161 --YAIAKAALDQYTRSTAIDLA--KFGIRVNSVSPGMVETGFTNAM 202

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  112 bits (282), Expect = 6e-30
 Identities = 46/214 (21%), Positives = 80/214 (37%), Gaps = 26/214 (12%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLS 96
             I+TGA+ GIG E A  LAK GA +V+ ARS +  ++  +        +    +   + 
Sbjct: 16  KVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELG-AASAHYIAGTME 74

Query: 97  SLSSVRNFVSQFHSLNLPLNLLINN--AGKFAHQHAISEDGIEMTFATNYLGHFLLTKLL 154
            ++    FV+Q   L   L++LI N       +        +  +   N+L + +LT   
Sbjct: 75  DMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAA 134

Query: 155 LKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLANV 214
           L  + ++       G IV VSS         +                  AY+ SK A  
Sbjct: 135 LPMLKQS------NGSIVVVSSLAGKVAYPMVA-----------------AYSASKFALD 171

Query: 215 LHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRE 248
                + +       NV++     G++ T    +
Sbjct: 172 GFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMK 205

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  110 bits (277), Expect = 7e-29
 Identities = 50/240 (20%), Positives = 89/240 (37%), Gaps = 33/240 (13%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCP---GSDIVVLPL 93
            AI+TG  +GIG    + L + G+ +V+ +R L+  + A   L ++ P    + ++ +  
Sbjct: 14  VAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQC 73

Query: 94  DLSSLSSVRNFVSQFHSLNLPLNLLINNAG--KFAHQHAISEDGIEMTFATNYLGHFLLT 151
           ++ +   V N V         +N L+NN G    +    IS  G      TN  G F + 
Sbjct: 74  NIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMC 133

Query: 152 KLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKL 211
           K +    ++        G IVN+     + F   +                      ++ 
Sbjct: 134 KAVYSSWMKEH-----GGSIVNIIVPTKAGFPLAVH------------------SGAARA 170

Query: 212 ANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSKLLKTIPQG 271
                TK LA       + + +NCV PG++ ++   E  G      F       + IP  
Sbjct: 171 GVYNLTKSLALEWA--CSGIRINCVAPGVIYSQTAVENYGSWGQSFF---EGSFQKIPAK 225

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  110 bits (275), Expect = 7e-29
 Identities = 40/219 (18%), Positives = 69/219 (31%), Gaps = 29/219 (13%)

Query: 32  NLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVL 91
           +L + T ++TG T GIG       A  GA +   AR+     E  ++      G  +   
Sbjct: 5   SLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKK--GFQVTGS 62

Query: 92  PLDLSSLSSVRNFVSQFHS-LNLPLNLLINNAG--KFAHQHAISEDGIEMTFATNYLGHF 148
             D S        +    S     L++LINN G  +       + +      +TN    +
Sbjct: 63  VCDASLRPEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAY 122

Query: 149 LLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYAL 208
            L++L    +          G    +  S  +      +                  Y+ 
Sbjct: 123 HLSQLAHPLLKA-------SGCGNIIFMSSIAGVVSASVGS---------------IYSA 160

Query: 209 SKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTR 247
           +K A     + LA         +  N V P ++ T L  
Sbjct: 161 TKGALNQLARNLACE--WASDGIRANAVAPAVIATPLAE 197

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  106 bits (266), Expect = 1e-27
 Identities = 50/256 (19%), Positives = 79/256 (30%), Gaps = 38/256 (14%)

Query: 32  NLSSVTAIITGATSGIGAETARVLAK---RGARLVLPARSLKAAEEAKARLASDCPGSDI 88
            L     ++TGA+ G G   A  LA+    G+ +++ ARS     + K  L +  P   +
Sbjct: 3   GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKV 62

Query: 89  VVLPLDLSSLSSVRNFVSQFHSL----NLPLNLLINNAGKFAHQ-----HAISEDGIEMT 139
           V+   DL + + V+  +S    L     L   LLINNA           +      +   
Sbjct: 63  VLAAADLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNY 122

Query: 140 FATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSH 199
           +A N      LT   L    ++   +                    +             
Sbjct: 123 WALNLTSMLCLTSGTLNAFQDSPGLSKTV------------VNISSLCALQPYKGWG--- 167

Query: 200 YDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFF 259
                 Y   K A  +  + LA        +V V    PG +   + +       D    
Sbjct: 168 -----LYCAGKAARDMLYQVLAAEEP----SVRVLSYAPGPLDNDMQQLARETSKDPELR 218

Query: 260 LTSKLLKTIPQGAATT 275
             SKL K    GA   
Sbjct: 219 --SKLQKLKSDGALVD 232

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  106 bits (265), Expect = 1e-27
 Identities = 51/219 (23%), Positives = 92/219 (42%), Gaps = 35/219 (15%)

Query: 32  NLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVL 91
           N S + A++TGA  GIG +T + L   GA++V   R+                   I  +
Sbjct: 2   NFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECP------GIEPV 55

Query: 92  PLDLSSLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFL 149
            +DL    +    +        P++LL+NNA     Q    ++++  + +F+ N    F 
Sbjct: 56  CVDLGDWDATEKALGGIG----PVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQ 111

Query: 150 LTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALS 209
           +++++ + MI         G IVNVSS +      ++I                  Y+ +
Sbjct: 112 VSQMVARDMINRGV----PGSIVNVSSMVAHVTFPNLI-----------------TYSST 150

Query: 210 KLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRE 248
           K A  + TK +A  L      + VN V+P +V T + ++
Sbjct: 151 KGAMTMLTKAMAMELG--PHKIRVNSVNPTVVLTDMGKK 187

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

 Score =  105 bits (264), Expect = 2e-27
 Identities = 52/242 (21%), Positives = 90/242 (37%), Gaps = 31/242 (12%)

Query: 32  NLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVL 91
           +L    A++TG + G+G   A+ LA+ G  +V+ +R+L+ A EA  +L     G + +  
Sbjct: 2   DLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKY-GVETMAF 60

Query: 92  PLDLSSLSSVRNFVSQFHSLNLPLNLLINNAG--KFAHQHAISEDGIEMTFATNYLGHFL 149
             D+S+   V+  +         L+ ++N AG  +         D        N  G + 
Sbjct: 61  RCDVSNYEEVKKLLEAVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYY 120

Query: 150 LTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALS 209
           + +     +                            I  +G ++  +       AYA S
Sbjct: 121 VCREAFSLLR---------------------ESDNPSIINIGSLTVEEVTMPNISAYAAS 159

Query: 210 KLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSKLLKTIP 269
           K      TK LA+   +    + VN + PG  RT++T         L       +LK IP
Sbjct: 160 KGGVASLTKALAKEWGRY--GIRVNVIAPGWYRTKMTEAVFSDPEKL-----DYMLKRIP 212

Query: 270 QG 271
            G
Sbjct: 213 LG 214

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  104 bits (260), Expect = 6e-27
 Identities = 45/219 (20%), Positives = 81/219 (36%), Gaps = 35/219 (15%)

Query: 32  NLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVL 91
            L+    ++TGA  GIG  T + L   GAR+V  +R+    +              I  +
Sbjct: 4   FLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPG------IEPV 57

Query: 92  PLDLSSLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHA--ISEDGIEMTFATNYLGHFL 149
            +DL    +    +        P++LL+NNA     Q    ++++  + +F  N      
Sbjct: 58  CVDLGDWEATERALGSVG----PVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQ 113

Query: 150 LTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALS 209
           +++++ + +I         G IVN      S                         Y  +
Sbjct: 114 VSQIVARGLIARGV----PGAIVN-----VSSQCSQR------------AVTNHSVYCST 152

Query: 210 KLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRE 248
           K A  + TK +A  L      + VN V+P +V T + + 
Sbjct: 153 KGALDMLTKVMALELGPH--KIRVNAVNPTVVMTSMGQA 189

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} Length = 276

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

 Score =  103 bits (259), Expect = 2e-26
 Identities = 47/245 (19%), Positives = 86/245 (35%), Gaps = 41/245 (16%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLS 96
             +ITG  SG+G          GA++ +  +S +   E +        G +++ +  D+ 
Sbjct: 7   AVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDH-----GDNVLGIVGDVR 61

Query: 97  SLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAI-------SEDGIEMTFATNYLGHFL 149
           SL   +   S+  +    ++ LI NAG + +  A+        +   +  F  N  G+  
Sbjct: 62  SLEDQKQAASRCVARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIH 121

Query: 150 LTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALS 209
             K  L  ++ +      +G ++   S+   + +G                     Y  +
Sbjct: 122 AVKACLPALVAS------RGNVIFTISNAGFYPNGGGP-----------------LYTAA 158

Query: 210 KLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFF---LTSKLLK 266
           K A V   +ELA  L      V VN V  G + + L       +         L   L  
Sbjct: 159 KHAIVGLVRELAFELAP---YVRVNGVGSGGINSDLRGPSSLGMGSKAISTVPLADMLKS 215

Query: 267 TIPQG 271
            +P G
Sbjct: 216 VLPIG 220

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

 Score =  103 bits (257), Expect = 3e-26
 Identities = 48/219 (21%), Positives = 79/219 (36%), Gaps = 30/219 (13%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLS 96
            AIITG   GIG  TA++  + GA++V+   +    ++    + S      I  +  D++
Sbjct: 8   VAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGS---PDVISFVHCDVT 64

Query: 97  SLSSVRNFVSQFHSLNLPLNLLINNA----GKFAHQHAISEDGIEMTFATNYLGHFLLTK 152
               VRN V    + +  L+++  N                +  +     N  G FL+ K
Sbjct: 65  KDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAK 124

Query: 153 LLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLA 212
              + MI   K  G      ++SS         +                   Y  +K A
Sbjct: 125 HAARVMIPAKK--GSIVFTASISSFTAGEGVSHV-------------------YTATKHA 163

Query: 213 NVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREG 251
            +  T  L   L +    + VNCV P IV + L  +  G
Sbjct: 164 VLGLTTSLCTELGEY--GIRVNCVSPYIVASPLLTDVFG 200

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

 Score =  102 bits (255), Expect = 3e-26
 Identities = 27/215 (12%), Positives = 57/215 (26%), Gaps = 35/215 (16%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLS 96
           TAI+T      G  +A  L++ G  +     S K  +E +A   +           L   
Sbjct: 2   TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAET--------YPQLKPM 53

Query: 97  SLSSVRNFVSQFHSLNLPLNLLINNAG---KFAHQHAISEDGIEMTFATNYLGHFLLTKL 153
           S       +    S    +++L++N     +F      + +          +  F L   
Sbjct: 54  SEQEPAELIEAVTSAYGQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNA 113

Query: 154 LLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLAN 213
           +                                       +     +     Y  ++   
Sbjct: 114 VA----------------------SQMKKRKSGHIIFITSATPFGPWKELSTYTSARAGA 151

Query: 214 VLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRE 248
                 L++ L   E N+ V  + P  + +  +  
Sbjct: 152 CTLANALSKELG--EYNIPVFAIGPNYLHSEDSPY 184

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 302

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  102 bits (256), Expect = 6e-26
 Identities = 40/246 (16%), Positives = 79/246 (32%), Gaps = 39/246 (15%)

Query: 32  NLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASD----CPGSD 87
                  ++TGA  G+G   A   A+RGA +V+           K   A+D         
Sbjct: 4   RFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRR 63

Query: 88  IVVLPLDLSSLSSVRNFVSQFHSLNLPLNLLINNAG--KFAHQHAISEDGIEMTFATNYL 145
                 +  S+ +    V         +++++NNAG  +      IS++  ++    +  
Sbjct: 64  GGKAVANYDSVEAGEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLR 123

Query: 146 GHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRA 205
           G F +T+     M +        GRI+  +S+   + +                      
Sbjct: 124 GSFQVTRAAWDHMKKQNY-----GRIIMTASASGIYGNFGQA-----------------N 161

Query: 206 YALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREG---------FITDL 256
           Y+ +KL  +     L    +  + N+  N + P                      ++  L
Sbjct: 162 YSAAKLGLLGLANTLVIEGR--KNNIHCNTIAPNAGSRMTETVMPEDLVEALKPEYVAPL 219

Query: 257 VFFLTS 262
           V +L  
Sbjct: 220 VLWLCH 225

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score =  100 bits (249), Expect = 2e-25
 Identities = 46/214 (21%), Positives = 79/214 (36%), Gaps = 31/214 (14%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLS 96
            A+++G   G+GA   R +   GA++V      +  +   A L           + LD++
Sbjct: 8   VALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAEL-----ADAARYVHLDVT 62

Query: 97  SLSSVRNFVSQFHSLNLPLNLLINNA--GKFAHQHAISEDGIEMTFATNYLGHFLLTKLL 154
             +  +  V    +    L++L+NNA           +    +     N  G FL  + +
Sbjct: 63  QPAQWKAAVDTAVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAV 122

Query: 155 LKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLANV 214
           +K M E       +G I+N+SS      +                      Y  +K A  
Sbjct: 123 VKPMKE-----AGRGSIINISSIEGLAGTVACH-----------------GYTATKFAVR 160

Query: 215 LHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRE 248
             TK  A  L      + VN +HPG+V+T +T  
Sbjct: 161 GLTKSTALELGPS--GIRVNSIHPGLVKTPMTDW 192

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

 Score = 99.8 bits (248), Expect = 4e-25
 Identities = 44/236 (18%), Positives = 82/236 (34%), Gaps = 22/236 (9%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLS 96
             +ITG  SG+G  TA  LA  GA+L L   S +  E +KA +    P ++++    D+S
Sbjct: 6   VVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVS 65

Query: 97  SLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLK 156
             + V  +V+        ++   NNAG    +   +E      F                
Sbjct: 66  DEAQVEAYVTATTERFGRIDGFFNNAG-IEGKQNPTESFTAAEF---------------- 108

Query: 157 KMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLANVLH 216
             + +    G+   +  V   +    SG ++              +   YA +K   V  
Sbjct: 109 DKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQS--GYAAAKHGVVGL 166

Query: 217 TKELAQRLKQMEANVTVNCVHPGIVRTRLTRE-REGFITDLVFFLTSKLLKTIPQG 271
           T+  A         + +N + PG + T +     +    +       + ++  P  
Sbjct: 167 TRNSAVEYG--RYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSK 220

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score = 98.9 bits (246), Expect = 8e-25
 Identities = 57/237 (24%), Positives = 101/237 (42%), Gaps = 35/237 (14%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLS 96
            A++TGA  GIG E A++LAK  + ++  +R+ K+ +     + S   G +      D+S
Sbjct: 12  VALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSF--GYESSGYAGDVS 69

Query: 97  SLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLL 154
               +   +++  + +  +++L+NNAG         +  D  E    TN    F +T+ +
Sbjct: 70  KKEEISEVINKILTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPI 129

Query: 155 LKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLANV 214
            K+MI         GRI+N+SS +    +                      Y+ SK   +
Sbjct: 130 SKRMIN-----NRYGRIINISSIVGLTGNVGQA-----------------NYSSSKAGVI 167

Query: 215 LHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSKLLKTIPQG 271
             TK LA+ L     N+TVN + PG + + +T +    I          ++  IP G
Sbjct: 168 GFTKSLAKEL--ASRNITVNAIAPGFISSDMTDKISEQIKK-------NIISNIPAG 215

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

 Score = 97.4 bits (242), Expect = 2e-24
 Identities = 52/242 (21%), Positives = 87/242 (35%), Gaps = 41/242 (16%)

Query: 32  NLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVL 91
            L     +ITGA  GIG  T  + AK GARLV          EA   + +         +
Sbjct: 2   RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHP-------V 54

Query: 92  PLDLSSLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFL 149
            +D++  +SV    ++  +    L+ +++ AG         +  +  E+    N  G FL
Sbjct: 55  VMDVADPASVERGFAEALAHLGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFL 114

Query: 150 LTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALS 209
           + K   + M E    + +       +S ++    G                     YA S
Sbjct: 115 VAKAASEAMREKNPGSIVL-----TASRVYLGNLGQA------------------NYAAS 151

Query: 210 KLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSKLLKTIP 269
               V  T+ LA  L      + VN + PG + TR+T +    + +       K +   P
Sbjct: 152 MAGVVGLTRTLALELG--RWGIRVNTLAPGFIETRMTAKVPEKVRE-------KAIAATP 202

Query: 270 QG 271
            G
Sbjct: 203 LG 204

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} Length = 240

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

 Score = 97.1 bits (241), Expect = 3e-24
 Identities = 47/220 (21%), Positives = 79/220 (35%), Gaps = 35/220 (15%)

Query: 38  AIITGATSGIGAETARVLAKRGAR-------LVLPARSLKAAEEAKARLASDCPGSDIVV 90
            +ITGA  GIG   A   A+           LVL +R+    E+      ++  G+    
Sbjct: 4   LLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAE--GALTDT 61

Query: 91  LPLDLSSLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHF 148
           +  D+S ++ VR   +        ++ L+NNAG         ++E+  + T  TN  G F
Sbjct: 62  ITADISDMADVRRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTF 121

Query: 149 LLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYAL 208
            LT+ L   M          G I  ++S   +                         Y +
Sbjct: 122 FLTQALFALMERQHS-----GHIFFITSVAATKAFRHSS-----------------IYCM 159

Query: 209 SKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRE 248
           SK       + +    +  + NV +  V PG V T +  +
Sbjct: 160 SKFGQRGLVETMRLYAR--KCNVRITDVQPGAVYTPMWGK 197

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score = 97.1 bits (241), Expect = 3e-24
 Identities = 56/215 (26%), Positives = 84/215 (39%), Gaps = 30/215 (13%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPA-RSLKAAEEAKARLASDCPGSDIVVLPLDL 95
            A+ TGA  GIG   A  L +RGA +V+    S KAAEE  A L     G+  V +  D+
Sbjct: 8   VALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKL--GAQGVAIQADI 65

Query: 96  SSLSSVRNFVSQFHSLNLPLNLLINNAG--KFAHQHAISEDGIEMTFATNYLGHFLLTKL 153
           S  S V     +  S    L+ +++N+G   +  +  ++++  +  F  N  G F + + 
Sbjct: 66  SKPSEVVALFDKAVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQ 125

Query: 154 LLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLAN 213
            LK                           G  I     I+   +       YA SK A 
Sbjct: 126 GLKHCRR-----------------------GGRIILTSSIAAVMTGIPNHALYAGSKAAV 162

Query: 214 VLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRE 248
               +  A         VTVNC+ PG V+T +  E
Sbjct: 163 EGFCRAFAVDCGAK--GVTVNCIAPGGVKTDMFDE 195

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} Length = 261

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

 Score = 97.1 bits (241), Expect = 4e-24
 Identities = 46/221 (20%), Positives = 77/221 (34%), Gaps = 26/221 (11%)

Query: 31  PNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVV 90
            +L     +ITG+++G+G   A   A   A++V+  RS +    +         G + + 
Sbjct: 3   KDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKV-GGEAIA 61

Query: 91  LPLDLSSLSSVRNFVSQFHSLNLPLNLLINNA--GKFAHQHAISEDGIEMTFATNYLGHF 148
           +  D++  S V N V         L+++INNA        H +S         TN  G F
Sbjct: 62  VKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAF 121

Query: 149 LLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYAL 208
           L ++  +K  +                                     K  +     YA 
Sbjct: 122 LGSREAIKYFV---------------------ENDIKGTVINMSSVHEKIPWPLFVHYAA 160

Query: 209 SKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRER 249
           SK    L T+ LA         + VN + PG + T +  E+
Sbjct: 161 SKGGMKLMTETLALEYAPK--GIRVNNIGPGAINTPINAEK 199

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

 Score = 96.0 bits (238), Expect = 9e-24
 Identities = 57/243 (23%), Positives = 92/243 (37%), Gaps = 30/243 (12%)

Query: 32  NLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVL 91
           +L   TA++TG + GIG      LA  GAR+   +R+ K  +E          G ++   
Sbjct: 3   SLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREK--GLNVEGS 60

Query: 92  PLDLSSLSSVRNFVSQF-HSLNLPLNLLINNAGKFAHQHA--ISEDGIEMTFATNYLGHF 148
             DL S +     +    H  +  LN+L+NNAG   H+ A   +E    +   TN+   +
Sbjct: 61  VCDLLSRTERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAY 120

Query: 149 LLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYAL 208
            L+++    +  +      Q   V   SSI  + +   +                  Y+ 
Sbjct: 121 HLSQIAYPLLKAS------QNGNVIFLSSIAGFSALPSVSL----------------YSA 158

Query: 209 SKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSKLLKTI 268
           SK A    TK LA      + N+ VN V PG++ T L              +    +   
Sbjct: 159 SKGAINQMTKSLACEW--AKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEI-DNFIVKT 215

Query: 269 PQG 271
           P G
Sbjct: 216 PMG 218

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

 Score = 95.9 bits (238), Expect = 1e-23
 Identities = 59/241 (24%), Positives = 90/241 (37%), Gaps = 30/241 (12%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLS 96
            A++TGATSGIG E AR L K G R+ + AR  +        L     G +      D+ 
Sbjct: 4   VALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREA--GVEADGRTCDVR 61

Query: 97  SLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLL 154
           S+  +   V+       P+++L+NNAG+        ++++       TN  G F +TK +
Sbjct: 62  SVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQV 121

Query: 155 LKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLANV 214
           LK      +                    G         +  K        Y+ SK   V
Sbjct: 122 LKAGGMLER--------------------GTGRIVNIASTGGKQGVVHAAPYSASKHGVV 161

Query: 215 LHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLT----SKLLKTIPQ 270
             TK L   L      +TVN V PG V T +        +D+    T     ++   +P 
Sbjct: 162 GFTKALGLELA--RTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPI 219

Query: 271 G 271
           G
Sbjct: 220 G 220

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

 Score = 95.5 bits (237), Expect = 1e-23
 Identities = 43/218 (19%), Positives = 74/218 (33%), Gaps = 27/218 (12%)

Query: 32  NLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVL 91
            L    AIITGA +GIG E A   A  GA +V+   +  AA      +     G      
Sbjct: 8   RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQL--GGQAFAC 65

Query: 92  PLDLSSLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQ-HAISEDGIEMTFATNYLGHFLL 150
             D++S   +        S    +++L+NNAG    +   +        +  N    F L
Sbjct: 66  RCDITSEQELSALADFAISKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHL 125

Query: 151 TKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSK 210
           ++L+  +M +                         +     +         A+   A S 
Sbjct: 126 SQLVAPEMEK-----------------NGGGVILTITSMAAENKNINMTSYASSKAAASH 168

Query: 211 LANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRE 248
           L   +   +L ++      N+ VN + PG + T   + 
Sbjct: 169 LVRNMA-FDLGEK------NIRVNGIAPGAILTDALKS 199

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} Length = 294

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

 Score = 95.6 bits (237), Expect = 2e-23
 Identities = 39/235 (16%), Positives = 79/235 (33%), Gaps = 26/235 (11%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLS 96
            A ITG  +G+G     +L+  GA+ V+ +R +   +    +++S   G+ +  +  D+ 
Sbjct: 27  VAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQT-GNKVHAIQCDVR 85

Query: 97  SLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLK 156
               V+N VS+   +    N++INNA                      +       + L+
Sbjct: 86  DPDMVQNTVSELIKVAGHPNIVINNA-AGNFISPTERLSPNAWKTITDIVLNGTAFVTLE 144

Query: 157 KMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLANVLH 216
              +  KA      +   +    +     +                    A +K      
Sbjct: 145 IGKQLIKAQKGAAFLSITTIYAETGSGFVV------------------PSASAKAGVEAM 186

Query: 217 TKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSKLLKTIPQG 271
           +K LA      +  +  N + PG ++T+    R             +++  IP G
Sbjct: 187 SKSLAAEWG--KYGMRFNVIQPGPIKTKGAFSRLDPTGTFE----KEMIGRIPCG 235

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} Length = 245

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 94.4 bits (234), Expect = 3e-23
 Identities = 53/237 (22%), Positives = 84/237 (35%), Gaps = 37/237 (15%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLS 96
             I+T A  GIG   A   A+ GA+++    +    +E +          D+        
Sbjct: 8   VIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQTRVLDV-------- 59

Query: 97  SLSSVRNFVSQFHSLNLPLNLLINNAG--KFAHQHAISEDGIEMTFATNYLGHFLLTKLL 154
              + +  + QF +    L++L N AG           E   + +   N    +L+ K  
Sbjct: 60  ---TKKKQIDQFANEVERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAF 116

Query: 155 LKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLANV 214
           L KM+         G I+N+ SS+ S   G + R                 Y+ +K A +
Sbjct: 117 LPKMLA-----QKSGNIINM-SSVASSVKGVVNRC---------------VYSTTKAAVI 155

Query: 215 LHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSKLLKTIPQG 271
             TK +A    Q    +  NCV PG V T   +ER            +  LK    G
Sbjct: 156 GLTKSVAADFIQQ--GIRCNCVCPGTVDTPSLQERIQA-RGNPEEARNDFLKRQKTG 209

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

 Score = 93.6 bits (232), Expect = 4e-23
 Identities = 52/237 (21%), Positives = 84/237 (35%), Gaps = 41/237 (17%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLS 96
           T ++TGA SGIG     + A+ GA LV   R  +   EA A L      ++ + +  D+S
Sbjct: 7   TILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAAL-----EAEAIAVVADVS 61

Query: 97  SLSSVRNFVSQFHSLNLPLNLLINNAG--KFAHQHAISEDGIEMTFATNYLGHFLLTKLL 154
              +V    ++       L+ + + AG    A    +  +  E     N  G FL+ +  
Sbjct: 62  DPKAVEAVFAEALEEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKA 121

Query: 155 LKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLANV 214
            + +          G +V   S       G                     YA  KL  V
Sbjct: 122 GEVLE-------EGGSLVLTGSVAGLGAFGLA------------------HYAAGKLGVV 156

Query: 215 LHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSKLLKTIPQG 271
              + LA  L      V VN + PG+++T +T         L  +   + +   P G
Sbjct: 157 GLARTLALELA--RKGVRVNVLLPGLIQTPMTA-------GLPPWAWEQEVGASPLG 204

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

 Score = 94.1 bits (233), Expect = 5e-23
 Identities = 51/240 (21%), Positives = 75/240 (31%), Gaps = 27/240 (11%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLS 96
            A++TG+TSGIG   A  LA +GA +VL      A  E      +   G  ++    DLS
Sbjct: 6   VAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLS 65

Query: 97  SLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLK 156
              +VR  V         +++L+NNAG             +           +       
Sbjct: 66  KGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAA 125

Query: 157 KMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLANVLH 216
                 +  G    I +    + S                        AY  +K   V  
Sbjct: 126 LPHMKKQGFGRIINIASAHGLVASANKS--------------------AYVAAKHGVVGF 165

Query: 217 TKELAQRLKQMEANVTVNCVHPGIVRTRLTRER-----EGFITDLVFFLTSKLLKTIPQG 271
           TK  A         +T N + PG VRT L  ++     E    D        L +  P  
Sbjct: 166 TKVTALETAGQ--GITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSL 223

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 94.2 bits (233), Expect = 8e-23
 Identities = 43/218 (19%), Positives = 67/218 (30%), Gaps = 28/218 (12%)

Query: 38  AIITGATSGIGAETARVLAKRGARLVLPARSL----KAAEEAKARLASDCPGSDIVVLPL 93
            +ITG +SGIG   A  LA   ++      +L          +A  A  CP   +  L L
Sbjct: 5   VLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQL 64

Query: 94  DLSSLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKL 153
           D+    SV     +     + + +     G      A+ ED +      N +G   + + 
Sbjct: 65  DVRDSKSVAAARERVTEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQA 124

Query: 154 LLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLAN 213
            L  M          GR++   S                             Y  SK A 
Sbjct: 125 FLPDMKRRGS-----GRVLVTGSVGGLMGLPFND-----------------VYCASKFAL 162

Query: 214 VLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREG 251
               + LA  L      V ++ +  G V T    +  G
Sbjct: 163 EGLCESLAVLLL--PFGVHLSLIECGPVHTAFMEKVLG 198

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

 Score = 93.3 bits (231), Expect = 1e-22
 Identities = 48/213 (22%), Positives = 76/213 (35%), Gaps = 23/213 (10%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLS 96
             ++TGA   IG  TA  LA+ G  + L   + +A E+A+A +     G +      D++
Sbjct: 7   VCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREK--GVEARSYVCDVT 64

Query: 97  SLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLK 156
           S  +V   V         ++ L NNAG       + +   +       +       +L  
Sbjct: 65  SEEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKA 124

Query: 157 KMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLANVLH 216
              +        GRIVN +S        +M                  AY  SK A +  
Sbjct: 125 VSRQMITQ--NYGRIVNTASMAGVKGPPNMA-----------------AYGTSKGAIIAL 165

Query: 217 TKELAQRLKQMEANVTVNCVHPGIVRTRLTRER 249
           T+  A  L     N+ VN + PG +      ER
Sbjct: 166 TETAALDLA--PYNIRVNAISPGYMGPGFMWER 196

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

 Score = 92.5 bits (229), Expect = 1e-22
 Identities = 65/263 (24%), Positives = 112/263 (42%), Gaps = 44/263 (16%)

Query: 38  AIITGATSGIGAETARVLAKRGARLVLP-ARSLKAAEEAKARLASDCPGSDIVVLPLDLS 96
            ++TGA+ GIG   A  L K G ++++  ARS KAAEE   ++ +   G   +    D+S
Sbjct: 4   VVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAY--GGQAITFGGDVS 61

Query: 97  SLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAI--SEDGIEMTFATNYLGHFLLTKLL 154
             + V   +         +++++NNAG       I   +   +     N  G FL T+  
Sbjct: 62  KEADVEAMMKTAIDAWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAA 121

Query: 155 LKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLANV 214
            K M++  K     GRI+N++S         ++  +G I +          YA +K   +
Sbjct: 122 TKIMMKKRK-----GRIINIAS---------VVGLIGNIGQA--------NYAAAKAGVI 159

Query: 215 LHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSKLLKTIPQG--- 271
             +K  A+       N+ VN V PG + + +T +       L   +  K+L TIP G   
Sbjct: 160 GFSKTAAREGA--SRNINVNVVCPGFIASDMTAK-------LGEDMEKKILGTIPLGRTG 210

Query: 272 -----AATTCYVAIHPRLVNVSG 289
                A    ++A+ P    ++G
Sbjct: 211 QPENVAGLVEFLALSPAASYITG 233

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 92.1 bits (227), Expect = 2e-22
 Identities = 54/243 (22%), Positives = 89/243 (36%), Gaps = 29/243 (11%)

Query: 37  TAIITGATSGIGAETARVL---AKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPL 93
           + +ITG   G+G    + L    +    L    R+ + A+E +    +    S+I +L +
Sbjct: 4   SILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKN---HSNIHILEI 60

Query: 94  DLSSLSSVRNFVSQFHSL--NLPLNLLINNA---GKFAHQHAISEDGIEMTFATNYLGHF 148
           DL +  +    V+    +  +  LN+L NNA    K A   A+    +  T  TN +   
Sbjct: 61  DLRNFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPI 120

Query: 149 LLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYAL 208
           +L K  L  + + AKA        N S  +    +  +       S   +      AY  
Sbjct: 121 MLAKACLPLLKKAAKA--------NESQPMGVGRAAIINMSSILGSIQGNTDGGMYAYRT 172

Query: 209 SKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGF--------ITDLVFFL 260
           SK A    TK L+  L      +    +HPG V+T +               I   +  L
Sbjct: 173 SKSALNAATKSLSVDLY--PQRIMCVSLHPGWVKTDMGGSSAPLDVPTSTGQIVQTISKL 230

Query: 261 TSK 263
             K
Sbjct: 231 GEK 233

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score = 92.1 bits (228), Expect = 3e-22
 Identities = 46/215 (21%), Positives = 89/215 (41%), Gaps = 30/215 (13%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLP-ARSLKAAEEAKARLASDCPGSDIVVLPLDL 95
            A++TGA  GIG E A  L +RG ++++  A S ++AEE  A +  +  GSD   +  ++
Sbjct: 20  VALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKN--GSDAACVKANV 77

Query: 96  SSLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHA--ISEDGIEMTFATNYLGHFLLTKL 153
             +  +     +   +   L+++ +N+G  +  H   ++ +  +  F  N  G F + + 
Sbjct: 78  GVVEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVARE 137

Query: 154 LLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLAN 213
             K +        I GR++          +G                     Y+ SK A 
Sbjct: 138 AYKHLE-------IGGRLIL-----MGSITGQAKAVPKHA-----------VYSGSKGAI 174

Query: 214 VLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRE 248
               + +A  +   +  +TVN V PG ++T +   
Sbjct: 175 ETFARCMAIDMA--DKKITVNVVAPGGIKTDMYHA 207

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} Length = 243

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

 Score = 91.4 bits (226), Expect = 4e-22
 Identities = 57/242 (23%), Positives = 100/242 (41%), Gaps = 38/242 (15%)

Query: 32  NLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVL 91
           N     A++TGA+ GIG   A  LA RGA+++  A S   A+     L ++  G     L
Sbjct: 1   NFEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKG-----L 55

Query: 92  PLDLSSLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAISEDGIEMTF--ATNYLGHFL 149
            L+++  +S+ + + +  +    +++L+NNAG       +     E      TN    F 
Sbjct: 56  MLNVTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFR 115

Query: 150 LTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALS 209
           L+K +++ M++        GRI+ + S + +  +G                     YA +
Sbjct: 116 LSKAVMRAMMKKRH-----GRIITIGSVVGTMGNGGQA-----------------NYAAA 153

Query: 210 KLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSKLLKTIP 269
           K   +  +K LA+        +TVN V PG + T +TR                +L  +P
Sbjct: 154 KAGLIGFSKSLARE--VASRGITVNVVAPGFIETDMTRALSDDQRA-------GILAQVP 204

Query: 270 QG 271
            G
Sbjct: 205 AG 206

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

 Score = 90.6 bits (224), Expect = 9e-22
 Identities = 47/241 (19%), Positives = 88/241 (36%), Gaps = 31/241 (12%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLS 96
            A++TGA  GIG   A  L K G  + +   +   A+   + +     G   V + +D+S
Sbjct: 3   VALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQA--GGHAVAVKVDVS 60

Query: 97  SLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLL 154
               V   V Q        ++++NNAG        +I+ + ++  +  N  G     +  
Sbjct: 61  DRDQVFAAVEQARKTLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAA 120

Query: 155 LKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLANV 214
           ++   +      I           +                          Y+ SK A  
Sbjct: 121 VEAFKKEGHGGKIINACSQAGHVGNPEL---------------------AVYSSSKFAVR 159

Query: 215 LHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDL----VFFLTSKLLKTIPQ 270
             T+  A+ L  +   +TVN   PGIV+T +  E +  +++     + + T++  K I  
Sbjct: 160 GLTQTAARDLAPL--GITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITL 217

Query: 271 G 271
           G
Sbjct: 218 G 218

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} Length = 266

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

 Score = 88.4 bits (218), Expect = 6e-21
 Identities = 47/238 (19%), Positives = 79/238 (33%), Gaps = 41/238 (17%)

Query: 30  CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSL-KAAEEAKARLASDCPGSDI 88
           CP      A+ITG    IG   A  L ++G R+V+  R    AA+   A L +   GS +
Sbjct: 1   CP-----AAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAV 55

Query: 89  VV---LPLDLSSLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAISEDGIEMT------ 139
           +    L L  S L    + +          ++L+NNA  +     +  D           
Sbjct: 56  LCKGDLSLSSSLLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPI 115

Query: 140 -------FATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQ 192
                  F +N +    L +   ++  E          +VN+  ++              
Sbjct: 116 DAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMTDLPLPGFC----- 170

Query: 193 ISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRERE 250
                        Y ++K A    T+  A  L     ++ VN V PG+        +E
Sbjct: 171 ------------VYTMAKHALGGLTRAAALELAPR--HIRVNAVAPGLSLLPPAMPQE 214

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 236

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 87.2 bits (215), Expect = 1e-20
 Identities = 29/240 (12%), Positives = 64/240 (26%), Gaps = 48/240 (20%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLS 96
             ++ G    +G+   +    R   +          EEA A +      S          
Sbjct: 4   RVLVYGGRGALGSRCVQAFRARNWWVASIDVV--ENEEASASVIVKMTDSFT-------E 54

Query: 97  SLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAI---SEDGIEMTFATNYLGHFLLTKL 153
               V   V +       ++ ++  AG +A  +A         ++ +  +     + + L
Sbjct: 55  QADQVTAEVGKLLGDQ-KVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHL 113

Query: 154 LLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLAN 213
             K + E    T           +  +      +                  Y ++K A 
Sbjct: 114 ATKHLKEGGLLTLA--------GAKAALDGTPGMIG----------------YGMAKGAV 149

Query: 214 VLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREG-----------FITDLVFFLTS 262
               + LA +   M +      V P  + T + R+              F+ +      +
Sbjct: 150 HQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNRKSMPEADFSSWTPLEFLVETFHDWIT 209

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

 Score = 87.2 bits (215), Expect = 1e-20
 Identities = 44/241 (18%), Positives = 83/241 (34%), Gaps = 34/241 (14%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLS 96
           TA+ITG+  GIG   A    + GAR+ +   +L+AA    A +     G     + LD++
Sbjct: 7   TALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEI-----GPAACAIALDVT 61

Query: 97  SLSSVRNFVSQFHSLNLPLNLLINNA--GKFAHQHAISEDGIEMTFATNYLGHFLLTKLL 154
             +S+   V++       +++L+NNA     A    I+ +  +  FA N  G   + + +
Sbjct: 62  DQASIDRCVAELLDRWGSIDILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAV 121

Query: 155 LKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLANV 214
            + MI   +   I            +                 +    T++         
Sbjct: 122 ARAMIAGGRGGKIINMASQAGRRGEALVGVYCA-------TKAAVISLTQSAG------- 167

Query: 215 LHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTS----KLLKTIPQ 270
                L +        + VN + PG+V        +    D           ++   +P 
Sbjct: 168 ---LNLIRH------GINVNAIAPGVVDGEHWDGVDAKFADYENLPRGEKKRQVGAAVPF 218

Query: 271 G 271
           G
Sbjct: 219 G 219

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 237

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 85.2 bits (210), Expect = 5e-20
 Identities = 47/241 (19%), Positives = 82/241 (34%), Gaps = 42/241 (17%)

Query: 31  PNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVV 90
           P   S + ++TG   GIG   A+ LA  G ++ +  R   A +                 
Sbjct: 3   PPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGLFG------------- 49

Query: 91  LPLDLSSLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLL 150
           + +D++   +V    +       P+ +L++NAG  A    +     +     N       
Sbjct: 50  VEVDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAF 109

Query: 151 TKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSK 210
                 +    +      GR++ + S    W  G+                    YA SK
Sbjct: 110 RV---AQRASRSMQRNKFGRMIFIGSVSGLWGIGNQA-----------------NYAASK 149

Query: 211 LANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSKLLKTIPQ 270
              +   + +A+     +ANVT N V PG + T +TR  +  I           L+ IP 
Sbjct: 150 AGVIGMARSIARE--LSKANVTANVVAPGYIDTDMTRALDERIQQ-------GALQFIPA 200

Query: 271 G 271
            
Sbjct: 201 K 201

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

 Score = 83.7 bits (206), Expect = 2e-19
 Identities = 50/215 (23%), Positives = 78/215 (36%), Gaps = 39/215 (18%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLS 96
           +A++TG  SG+G   A  L  RG R+V+     +              G D++ +  D++
Sbjct: 3   SALVTGGASGLGRAAALALKARGYRVVVLDLRRE--------------GEDLIYVEGDVT 48

Query: 97  SLSSVRNFVSQFHSLNLPLNLLINN-----AGKFAHQHAISEDGIEMTFATNYLGHFLLT 151
               VR  V++         ++              +     +        N LG F + 
Sbjct: 49  REEDVRRAVARAQEEAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVL 108

Query: 152 KLLLKKMIETAK-ATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSK 210
           +L    M E    A G +G IVN +S         +  + GQI +         AYA SK
Sbjct: 109 RLAAWAMRENPPDAEGQRGVIVNTAS---------VAAFEGQIGQA--------AYAASK 151

Query: 211 LANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRL 245
              V  T   A+ L      + V  V PG+  T L
Sbjct: 152 GGVVALTLPAARELAGW--GIRVVTVAPGLFDTPL 184

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 82.3 bits (202), Expect = 8e-19
 Identities = 45/216 (20%), Positives = 68/216 (31%), Gaps = 23/216 (10%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLS 96
            A+ITG  SG+G  TA  L  +GA  VL        E    +L ++C  +   V      
Sbjct: 7   VAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDV 66

Query: 97  SLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAISEDGIEM---TFATNYLGHFLLTKL 153
             +                   I  A K  +        +E        N +G F + +L
Sbjct: 67  QTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRL 126

Query: 154 LLKKMIETAKATGIQ-GRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLA 212
           +  +M +     G Q G I+N +S                            AY+ SK  
Sbjct: 127 VAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQA-----------------AYSASKGG 169

Query: 213 NVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRE 248
            V  T  +A         + V  + PG+  T L   
Sbjct: 170 IVGMTLPIA--RDLAPIGIRVMTIAPGLFGTPLLTS 203

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 235

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 79.5 bits (195), Expect = 5e-18
 Identities = 27/218 (12%), Positives = 58/218 (26%), Gaps = 37/218 (16%)

Query: 34  SSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPL 93
           SS   I+ G    +G+       K G  ++    S     ++   +  +   ++      
Sbjct: 1   SSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQADSNILVDGNKNWTEQEQ--- 57

Query: 94  DLSSLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAI---SEDGIEMTFATNYLGHFLL 150
                S +    S        ++ +   AG +A   A         ++    +     + 
Sbjct: 58  -----SILEQTASSLQ--GSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIA 110

Query: 151 TKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSK 210
            KL    +          G +    ++                               +K
Sbjct: 111 AKLATTHLK-------PGGLLQLTGAA------------AAMGPTPSMIGYGM-----AK 146

Query: 211 LANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRE 248
            A    T  LA +   +  N  V  + P  + T + R+
Sbjct: 147 AAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNRK 184

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} Length = 234

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

 Score = 73.2 bits (179), Expect = 9e-16
 Identities = 36/214 (16%), Positives = 71/214 (33%), Gaps = 43/214 (20%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLS 96
             ++  A+ GIG   A VL++ GA + + AR+ +  + +  R            +  D  
Sbjct: 6   GVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRSGHR-----------YVVCD-- 52

Query: 97  SLSSVRNFVSQFHSLNLPLNLLINNA--GKFAHQHAISEDGIEMTFATNYLGHFLLTKLL 154
               +R  +         +++L+ NA   K      ++ +  +    + +L    + +  
Sbjct: 53  ----LRKDLDLLFEKVKEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNY 108

Query: 155 LKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLANV 214
           L  M                         G ++        +      T   A  ++A  
Sbjct: 109 LPAM--------------------KEKGWGRIVAITSFSVISPIENLYTSNSA--RMALT 146

Query: 215 LHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRE 248
              K L+   +     +TVNCV PG   T   +E
Sbjct: 147 GFLKTLS--FEVAPYGITVNCVAPGWTETERVKE 178

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

 Score = 73.7 bits (180), Expect = 1e-15
 Identities = 31/218 (14%), Positives = 62/218 (28%), Gaps = 37/218 (16%)

Query: 32  NLSSVTAIITGATS--GIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIV 89
           +LS   A++ G T+   +G   A  L + GA + L  ++ +   EA+            +
Sbjct: 5   DLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLA---EALGGAL 61

Query: 90  VLPLDLSSLSSVRNFVSQFHSLNLPLNLLINNA------GKFAHQHAISEDGIEMTFATN 143
           +   D++    +    +        L+ L++                       +    +
Sbjct: 62  LFRADVTQDEELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVS 121

Query: 144 YLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDAT 203
                 + +     + E        G IV ++                            
Sbjct: 122 AYSLVAVARRAEPLLRE-------GGGIVTLTYYASEKVVPKYN---------------- 158

Query: 204 RAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIV 241
              A++K A     + LA  L      V VN +  G V
Sbjct: 159 -VMAIAKAALEASVRYLAYELGPK--GVRVNAISAGPV 193

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

 Score = 71.1 bits (173), Expect = 7e-15
 Identities = 31/210 (14%), Positives = 71/210 (33%), Gaps = 24/210 (11%)

Query: 37  TAIITGATS--GIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLD 94
             ++TG  S   I    A+ + + GA L    ++ K     +   A        +VL  D
Sbjct: 7   RILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAA---QLGSDIVLQCD 63

Query: 95  LSSLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLL 154
           ++  +S+    ++   +    +  +++   FA    +  D +       +     ++   
Sbjct: 64  VAEDASIDTMFAELGKVWPKFDGFVHSI-GFAPGDQLDGDYVNAVTREGFKIAHDISSYS 122

Query: 155 LKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLANV 214
              M +  ++    G  +   S + +              R   +Y+      L+K +  
Sbjct: 123 FVAMAKACRSMLNPGSALLTLSYLGAE-------------RAIPNYN---VMGLAKASLE 166

Query: 215 LHTKELAQRLKQMEANVTVNCVHPGIVRTR 244
            + + +A         V VN +  G +RT 
Sbjct: 167 ANVRYMANA--MGPEGVRVNAISAGPIRTL 194

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score = 68.0 bits (165), Expect = 1e-13
 Identities = 40/219 (18%), Positives = 74/219 (33%), Gaps = 33/219 (15%)

Query: 38  AIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSS 97
            +I+G  +GIGA T +VL   G ++V          E  A                DLS+
Sbjct: 4   IVISGCATGIGAATRKVLEAAGHQIVGIDIR---DAEVIA----------------DLST 44

Query: 98  LSSVRNFVSQ-FHSLNLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLK 156
               +  ++      +  ++ L+  AG            +    + NY G   L    L 
Sbjct: 45  AEGRKQAIADVLAKCSKGMDGLVLCAG-----LGPQTKVLGNVVSVNYFGATELMDAFLP 99

Query: 157 KMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKS------HYDATRAYALSK 210
            + +  +   +    V  +          +    G+ ++ ++            AYA SK
Sbjct: 100 ALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQGGNLAYAGSK 159

Query: 211 LANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRER 249
            A  +  ++  +     EA V +N + PG   T L +  
Sbjct: 160 NALTVAVRK--RAAAWGEAGVRLNTIAPGATETPLLQAG 196

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} Length = 284

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

 Score = 62.8 bits (151), Expect = 8e-12
 Identities = 47/262 (17%), Positives = 87/262 (33%), Gaps = 41/262 (15%)

Query: 38  AIITGATSGIGAETARVLAKRGARLVLP-ARSLKAAEEAKARLASDCPGSDIVV------ 90
           A++TGA   +G   A  L   G  + L   RS   A    A L +  P S I V      
Sbjct: 5   ALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSN 64

Query: 91  ----------LPLDLSSLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQ--HAISEDGIEM 138
                         ++  +     V+  ++     ++L+NNA  F         EDG E 
Sbjct: 65  VATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEP 124

Query: 139 T--------------FATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSG 184
                          F +N +  + L K    ++  T      +G   ++ + + +  + 
Sbjct: 125 CVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAK--HRGTNYSIINMVDAMTNQ 182

Query: 185 DMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRT- 243
            ++ Y        +    TR+ AL      +    +   L  +  ++          +  
Sbjct: 183 PLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVDDMPPAVWEGHRSKVP 242

Query: 244 ---RLTREREGFITDLVFFLTS 262
              R +   E  ++D+V FL S
Sbjct: 243 LYQRDSSAAE--VSDVVIFLCS 262

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

 Score = 56.6 bits (135), Expect = 6e-10
 Identities = 20/45 (44%), Positives = 29/45 (64%), Gaps = 1/45 (2%)

Query: 37 TAIITGATSGIGAETARVLAKRGAR-LVLPARSLKAAEEAKARLA 80
          T ++TG T G+G + AR LA+RGA  L+L +RS   A+ A   +A
Sbjct: 11 TVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVA 55

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} Length = 191

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

 Score = 54.1 bits (129), Expect = 2e-09
 Identities = 25/185 (13%), Positives = 60/185 (32%), Gaps = 22/185 (11%)

Query: 32  NLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVL 91
           ++    A++   T  +G  +A +LA  GA +VL  R L  A+ A   +      +     
Sbjct: 20  SVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAA- 78

Query: 92  PLDLSSLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLT 151
             + +  +S    V          + +            + +   +   +   +  +   
Sbjct: 79  --ETADDASRAEAVKG-------AHFVFTAGA--IGLELLPQAAWQNESSIEIVADYNAQ 127

Query: 152 KLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMI-----RYLGQISR-NKSHYDATRA 205
             L    I+       +G+      +  +   G +        + ++   ++  +DA   
Sbjct: 128 PPLGIGGIDATD----KGKEYGGKRAFGALGIGGLKLKLHRACIAKLFESSEGVFDAEEI 183

Query: 206 YALSK 210
           Y L+K
Sbjct: 184 YKLAK 188

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

 Score = 52.4 bits (124), Expect = 2e-08
 Identities = 29/218 (13%), Positives = 63/218 (28%), Gaps = 25/218 (11%)

Query: 37  TAIITGATS--GIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLD 94
             +I G  +   I    A+    +GA L     +    +  +         +   V  LD
Sbjct: 7   KGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQE---LNSPYVYELD 63

Query: 95  LSSLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLL 154
           +S     ++  +        L+ ++++      +       +  T  + +     ++   
Sbjct: 64  VSKEEHFKSLYNSVKKDLGSLDFIVHSVAFAPKEALE--GSLLETSKSAFNTAMEISVYS 121

Query: 155 LKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLANV 214
           L ++  T K     G  V   S + S         +G             A         
Sbjct: 122 LIELTNTLKPLLNNGASVLTLSYLGSTKYMAHYNVMGLAKAALESAVRYLAV-------- 173

Query: 215 LHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGF 252
               +L +       ++ VN +  G +RT  +     F
Sbjct: 174 ----DLGKH------HIRVNALSAGPIRTLASSGIADF 201

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

 Score = 52.1 bits (123), Expect = 2e-08
 Identities = 11/49 (22%), Positives = 18/49 (36%), Gaps = 2/49 (4%)

Query: 37 TAIITGA--TSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDC 83
            +++G    S I    ARV  ++GA+LVL         +         
Sbjct: 8  RILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAK 56

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

 Score = 51.7 bits (122), Expect = 4e-08
 Identities = 11/53 (20%), Positives = 18/53 (33%), Gaps = 2/53 (3%)

Query: 32 NLSSVTAIITGA--TSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASD 82
          +L    A I G    +G G   A+ LA  GA +++            +     
Sbjct: 5  DLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGK 57

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 329

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score = 51.4 bits (121), Expect = 5e-08
 Identities = 33/231 (14%), Positives = 63/231 (27%), Gaps = 20/231 (8%)

Query: 38  AIITGATS--GIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDL 95
             I G     G G   A+ L+KR  +++            K           I+     +
Sbjct: 5   CFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKM 64

Query: 96  SSLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAISE--------------DGIEMTFA 141
           + L  +    S   + ++      N        + I +                  +  A
Sbjct: 65  NILDMLPFDASFDTANDIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANA 124

Query: 142 TNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYD 201
                  L T    +K    A +      I      ++       I  L   +  K    
Sbjct: 125 KEVQKDLLNTS---RKGYLDALSKSSYSLISLCKYFVNIMKPQSSIISLTYHASQKVVPG 181

Query: 202 ATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGF 252
                + +K A    T+ LA  L +   N+ +N +  G +++R        
Sbjct: 182 YGGGMSSAKAALESDTRVLAYHLGRNY-NIRINTISAGPLKSRAATAINKL 231

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 212

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

 Score = 48.9 bits (115), Expect = 2e-07
 Identities = 12/45 (26%), Positives = 19/45 (42%), Gaps = 1/45 (2%)

Query: 37 TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLAS 81
           A++ G    +G   A  LA  G  +V+ +R  + AE   A    
Sbjct: 3  VALLGGT-GNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRR 46

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 361

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score = 47.1 bits (111), Expect = 1e-06
 Identities = 28/189 (14%), Positives = 61/189 (32%), Gaps = 12/189 (6%)

Query: 39  IITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSL 98
           +ITG    IG+   R + K     V+    L  A   +  L+     +       D+   
Sbjct: 4   LITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLE-SLSDISESNRYNFEHADICDS 62

Query: 99  SSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKM 158
           + +     Q+       + +++ A + +H    S  G      TN +G + L ++  K  
Sbjct: 63  AEITRIFEQYQ-----PDAVMHLAAE-SHVDR-SITGPAAFIETNIVGTYALLEVARKYW 115

Query: 159 IETAKATGIQGRIVNVSSSIHSWFSGDMIRY----LGQISRNKSHYDATRAYALSKLANV 214
               +      R  ++S+                    +    + Y  +  Y+ SK ++ 
Sbjct: 116 SALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSASKASSD 175

Query: 215 LHTKELAQR 223
              +   + 
Sbjct: 176 HLVRAWRRT 184

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

 Score = 39.0 bits (89), Expect = 5e-04
 Identities = 12/70 (17%), Positives = 24/70 (34%)

Query: 40  ITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLS 99
           +TGA   + +     L + G ++   ARS       + R  +  PG     +  D+    
Sbjct: 16  VTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQG 75

Query: 100 SVRNFVSQFH 109
           +    +    
Sbjct: 76  AYDEVIKGAA 85

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} Length = 321

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 38.8 bits (89), Expect = 5e-04
 Identities = 30/171 (17%), Positives = 54/171 (31%), Gaps = 17/171 (9%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLS 96
           +A++TG T   GA  A++L ++G R+        +  + + RL       DI     D++
Sbjct: 2   SALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSS--DTRWRLRELGIEGDIQYEDGDMA 59

Query: 97  SLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLK 156
              SV+  V +                        S +    T   + LG   L      
Sbjct: 60  DACSVQRAVIKAQPQE-------VYNLAAQSFVGASWNQPVTTGVVDGLGVTHL------ 106

Query: 157 KMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYA 207
             +E  +    + R    S+S          +        +S Y   + Y 
Sbjct: 107 --LEAIRQFSPETRFYQASTSEMFGLIQAERQDENTPFYPRSPYGVAKLYG 155

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} Length = 350

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

 Score = 38.9 bits (89), Expect = 6e-04
 Identities = 20/114 (17%), Positives = 32/114 (28%), Gaps = 5/114 (4%)

Query: 37  TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPL--D 94
           T  + GAT   GA   RV A  G  +     S    +   A      P   +   PL  +
Sbjct: 5   TIAVVGATGRQGASLIRVAAAVGHHVRAQVHS---LKGLIAEELQAIPNVTLFQGPLLNN 61

Query: 95  LSSLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHF 148
           +  + ++                     GK     A     I+    ++   H 
Sbjct: 62  VPLMDTLFEGAHLAFINTTSQAGDEIAIGKDLADAAKRAGTIQHYIYSSMPDHS 115

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

 Score = 38.6 bits (89), Expect = 7e-04
 Identities = 25/150 (16%), Positives = 47/150 (31%), Gaps = 24/150 (16%)

Query: 35  SVTAIITGATSGIGAETARVLAKRGAR---LVLPARSLKAAEEAKARLASDCPGSDIVVL 91
           S  A+ITG T   G+  A  L ++G     +   A S                     + 
Sbjct: 1   SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLH 60

Query: 92  PLDLSSLSSVRNFVSQFHSLNLPLNLLINNAGKFAHQHAI--SEDGIEMTFATNYLGHFL 149
             DLS  S++   + +            +          +  S +  E T   + +G   
Sbjct: 61  YGDLSDTSNLTRILREVQ---------PDEVYNLGAMSHVAVSFESPEYTADVDAMG--- 108

Query: 150 LTKLLLKKMIETAKATGIQG--RIVNVSSS 177
                  +++E  +  G++   R    S+S
Sbjct: 109 -----TLRLLEAIRFLGLEKKTRFYQASTS 133

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

 Score = 38.6 bits (88), Expect = 7e-04
 Identities = 9/56 (16%), Positives = 15/56 (26%)

Query: 40 ITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDL 95
          I G T  IG          G    +  R    +   K ++          ++   L
Sbjct: 8  IVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASL 63

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	336
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	100.0
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	100.0
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	100.0
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	100.0
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	100.0
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	100.0
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	100.0
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	100.0
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	100.0
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	100.0
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	100.0
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	100.0
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	100.0
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	100.0
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	100.0
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	100.0
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	100.0
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	100.0
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	100.0
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	100.0
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	100.0
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	100.0
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	100.0
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	100.0
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	100.0
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	100.0
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	100.0
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	100.0
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	100.0
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	100.0
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	100.0
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	100.0
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	100.0
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	100.0
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	100.0
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	100.0
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	100.0
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	100.0
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	100.0
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	100.0
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	100.0
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	100.0
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	100.0
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	100.0
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	100.0
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	100.0
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	100.0
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	100.0
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	100.0
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	100.0
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	100.0
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	100.0
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	100.0
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	100.0
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	100.0
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	100.0
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	100.0
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	100.0
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	100.0
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	100.0
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	100.0
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	100.0
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	100.0
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	100.0
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	99.97
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	99.95
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	99.81
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	99.77
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	99.77
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.73
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	99.71
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	99.7
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.7
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.69
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	99.68
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	99.67
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	99.66
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	99.64
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	99.64
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.63
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	99.63
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	99.62
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	99.62
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	99.62
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.59
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	99.59
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.56
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	99.54
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	99.49
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	99.47
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	99.28
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	99.27
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	99.12
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	99.11
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	99.1
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	99.05
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	98.93
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	98.74
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	98.13
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	98.0
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	97.96
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	97.92
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	97.84
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	97.81
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	97.81
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	97.72
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	97.66
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	97.6
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	97.58
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	97.55
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	97.52
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	97.49
d1u7za_	223	Coenzyme A biosynthesis bifunctional protein CoaBC	97.45
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	97.43
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	97.42
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	97.42
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	97.39
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	97.36
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	97.29
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	97.28
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	97.24
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	97.17
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	97.15
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	97.13
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	97.1
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	97.08
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	97.04
d2ldxa1	159	Lactate dehydrogenase {Mouse (Mus musculus) [TaxId	97.0
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	96.93
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	96.9
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	96.87
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	96.87
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	96.84
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	96.82
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	96.8
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	96.78
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	96.76
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	96.75
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	96.72
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	96.69
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	96.67
d1o6za1	142	Malate dehydrogenase {Archaeon Haloarcula marismor	96.63
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	96.62
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	96.6
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	96.59
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	96.58
d1y7ta1	154	Malate dehydrogenase {Thermus thermophilus [TaxId:	96.49
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	96.47
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	96.46
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	96.43
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	96.42
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	96.41
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	96.39
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	96.38
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	96.33
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	96.29
d2cmda1	145	Malate dehydrogenase {Escherichia coli [TaxId: 562	96.28
d7mdha1	175	Malate dehydrogenase {Sorghum (Sorghum vulgare), c	96.27
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	96.27
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	96.15
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	96.15
d1yovb1	426	UBA3 {Human (Homo sapiens) [TaxId: 9606]}	96.14
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	96.11
d1uxja1	142	Malate dehydrogenase {Chloroflexus aurantiacus [Ta	96.1
d1wy7a1	201	Hypothetical protein PH1948 {Archaeon Pyrococcus h	96.04
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	95.96
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	95.94
d1ojua1	142	Malate dehydrogenase {Archaeon Archaeoglobus fulgi	95.9
d1p9oa_	290	Phosphopantothenoylcysteine synthetase {Human (Hom	95.82
d5mdha1	154	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	95.69
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	95.64
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	95.6
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	95.54
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	95.44
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	95.19
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	95.1
d2esra1	152	Putative methyltransferase SPy1538 {Streptococcus	95.03
d1nv8a_	271	N5-glutamine methyltransferase, HemK {Thermotoga m	94.91
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	94.91
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	94.79
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	94.78
d1ne2a_	197	Hypothetical protein Ta1320 {Archaeon Thermoplasma	94.65
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	94.61
d2as0a2	324	Hypothetical protein PH1915, middle and C-terminal	94.45
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	94.42
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	94.14
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	94.13
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	94.08
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	93.97
d1wxxa2	318	Hypothetical protein TTHA1280, middle and C-termin	93.91
d2fhpa1	182	Putative methylase EF2452 {Enterococcus faecalis [	93.74
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	93.57
d2b78a2	317	Hypothetical protein SMu776, middle and C-terminal	93.57
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	93.37
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	93.33
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	93.32
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	93.25
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	93.18
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	93.17
d2fyta1	311	Protein arginine N-methyltransferase 3, PRMT3 {Hum	93.17
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	93.14
d1yova1	529	Amyloid beta precursor protein-binding protein 1,	93.11
d1obba1	171	Alpha-glucosidase AglA {Thermotoga maritima [TaxId	93.1
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	93.1
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	93.05
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	93.03
d1oria_	316	Protein arginine N-methyltransferase 1, PRMT1 {Rat	92.73
d1y8ca_	246	Putative methyltransferase CAC2371 {Clostridium ac	92.72
d1l3ia_	186	Precorrin-6Y methyltransferase (CbiT) {Archaeon Me	92.68
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	92.56
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	92.53
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	92.36
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	92.33
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	92.29
d1u0sy_	118	CheY protein {Thermotoga maritima [TaxId: 2336]}	92.28
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	92.08
d1s6ya1	169	6-phospho-beta-glucosidase {Bacillus stearothermop	92.06
d2igta1	309	Putative methyltransferase Atu0340 {Agrobacterium	91.94
d2fr1a2	209	Erythromycin synthase, eryAI, 1st ketoreductase mo	91.92
d1m6ya2	192	TM0872, methyltransferase domain {Thermotoga marit	91.82
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	91.8
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	91.74
d1pjza_	201	Thiopurine S-methyltransferase {Pseudomonas syring	91.61
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	91.54
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	91.5
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	91.44
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	91.32
d1dl5a1	213	Protein-L-isoaspartyl O-methyltransferase {Thermot	91.22
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	91.22
d1u8xx1	167	Maltose-6'-phosphate glucosidase GlvA {Bacillus su	91.21
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	91.21
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	90.94
d1jg1a_	215	Protein-L-isoaspartyl O-methyltransferase {Archaeo	90.9
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	90.79
d2d59a1	139	Hypothetical protein PH1109 {Pyrococcus horikoshii	90.76
d2nxca1	254	PrmA-like protein TTHA0656 (TT0836) {Thermus therm	90.74
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	90.66
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	90.57
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	90.32
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	90.29
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	90.28
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	90.25
d1ws6a1	171	Methyltransferase TTHA0928 {Thermus thermophilus [	90.23
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	90.15
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	89.85
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	89.68
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	89.51
d1wzna1	251	Hypothetical methyltransferase PH1305 {Archaeon Py	89.48
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	89.4
d1bgva1	255	Glutamate dehydrogenase {Clostridium symbiosum [Ta	89.32
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	88.77
d1i1na_	224	Protein-L-isoaspartyl O-methyltransferase {Human (	88.67
d2bzga1	229	Thiopurine S-methyltransferase {Human (Homo sapien	88.63
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	88.51
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	88.5
d1ryia1	276	Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}	88.49
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	88.42
d2cvza2	156	Hydroxyisobutyrate dehydrogenase {Thermus thermoph	88.39
d1g6q1_	328	Arginine methyltransferase, HMT1 {Baker's yeast (S	87.67
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	87.4
d1ve3a1	226	Hypothetical protein PH0226 {Archaeon Pyrococcus h	87.28
d1vbfa_	224	Protein-L-isoaspartyl O-methyltransferase {Sulfolo	87.15
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	86.93
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	86.89
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	86.61
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	86.28
d1iuka_	136	Hypothetical protein TT1466 {Thermus thermophilus	86.22
d1yb2a1	250	Hypothetical protein Ta0852 {Thermoplasma acidophi	85.65
d2b3ta1	274	N5-glutamine methyltransferase, HemK {Escherichia	85.46
d1a9xa3	127	Carbamoyl phosphate synthetase (CPS), large subuni	85.22
d1f0ka_	351	Peptidoglycan biosynthesis glycosyltransferase Mur	85.18
d2csua3	163	Acetate-CoA ligase alpha chain, AcdA, domains 2 an	85.03
d2gv8a2	107	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	84.74
d2gf3a1	281	Sarcosine oxidase {Bacillus sp., strain b0618 [Tax	84.12
d1gsoa2	105	Glycinamide ribonucleotide synthetase (GAR-syn), N	83.76
d2i6ga1	198	Putative methyltransferase TehB {Salmonella typhim	83.68
d1gtma1	239	Glutamate dehydrogenase {Archaeon Pyrococcus furio	83.51
d1pj5a2	305	N,N-dimethylglycine oxidase {Arthrobacter globifor	83.34
d1peya_	119	Sporulation response regulator Spo0F {Bacillus sub	83.02
d2eyqa5	211	Transcription-repair coupling factor, TRCF {Escher	82.91
d1vkna1	176	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	82.89
d1wg8a2	182	TM0872, methyltransferase domain {Thermus thermoph	82.46
d2fpoa1	183	Methylase YhhF {Escherichia coli [TaxId: 562]}	82.28
d1nt2a_	209	Fibrillarin homologue {Archaeon Archaeoglobus fulg	81.85
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	81.82
d2i76a2	153	Hypothetical protein TM1727 {Thermotoga maritima [	81.82
d1ihua2	279	Arsenite-translocating ATPase ArsA {Escherichia co	81.7
d2o57a1	282	Putative sarcosine dimethylglycine methyltransfera	81.69
d1r18a_	223	Protein-L-isoaspartyl O-methyltransferase {Fruit f	81.55
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	81.5
d1c4oa2	174	Nucleotide excision repair enzyme UvrB {Thermus th	81.46
d1k0ia1	292	p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a	81.05
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	80.91
d1vl5a_	231	Hypothetical protein BH2331 {Bacillus halodurans [	80.76
d1y81a1	116	Hypothetical protein PF0725 {Pyrococcus furiosus [	80.68
d1d5ta1	336	Guanine nucleotide dissociation inhibitor, GDI {Co	80.62
d1byia_	224	Dethiobiotin synthetase {Escherichia coli [TaxId:	80.33
d2gz1a1	154	Aspartate beta-semialdehyde dehydrogenase {Strepto	80.19

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=5e-50  Score=353.85  Aligned_cols=243  Identities=23%  Similarity=0.304  Sum_probs=215.7

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      .++|+||+||||||++|||+++|++|+++|++|++++|++++++++.+++++.  +.++.++++|++++++++++++++.
T Consensus         5 ~f~lenKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~--g~~~~~~~~Dvt~~~~v~~~~~~~~   82 (251)
T d2c07a1           5 YYCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSF--GYESSGYAGDVSKKEEISEVINKIL   82 (251)
T ss_dssp             CCCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTT--TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHH
Confidence            56799999999999999999999999999999999999999999999999775  5689999999999999999999999


Q ss_pred             hcCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcc
Q 019722          110 SLNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMI  187 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~  187 (336)
                      +.+|++|+||||||.....  .+.+.++|++++++|+.++++++|+++|.|++++     .|+||++||.++..+     
T Consensus        83 ~~~g~iDilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-----~G~IVnisS~~~~~~-----  152 (251)
T d2c07a1          83 TEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNR-----YGRIINISSIVGLTG-----  152 (251)
T ss_dssp             HHCSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHT-----CEEEEEECCTHHHHC-----
T ss_pred             HhcCCceeeeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccCC-----CeEEEEECCHHhcCC-----
Confidence            9999999999999976654  6778899999999999999999999999999886     599999999998876     


Q ss_pred             cccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchh-HHHHHHHHHHhhcC
Q 019722          188 RYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGF-ITDLVFFLTSKLLK  266 (336)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~-~~~~~~~~~~~~~~  266 (336)
                                  .++..+|++||+|+++|+|+|+.|+++.|  ||||+|+||+|+|+|.....+. ........+..+..
T Consensus       153 ------------~~~~~~Y~asKaal~~ltr~lA~el~~~g--IrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~pl~R~~  218 (251)
T d2c07a1         153 ------------NVGQANYSSSKAGVIGFTKSLAKELASRN--ITVNAIAPGFISSDMTDKISEQIKKNIISNIPAGRMG  218 (251)
T ss_dssp             ------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCC-----CCHHHHHHHHTTCTTSSCB
T ss_pred             ------------CCCCHHHHHHHHHHHHHHHHHHHHhhhhC--eEEEEEccCCEecccccccCHHHHHHHHhcCCCCCCc
Confidence                        77788999999999999999999999998  9999999999999998876543 33333445566788


Q ss_pred             ChHHHHHHHHHHHhcCccccCCceeeccCcccc
Q 019722          267 TIPQGAATTCYVAIHPRLVNVSGKYFADCNEAW  299 (336)
Q Consensus       267 ~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  299 (336)
                      +|+|+|..++||++ +.++|+||+.+.+||+..
T Consensus       219 ~pedvA~~v~fL~S-~~s~~itG~~i~vDGG~s  250 (251)
T d2c07a1         219 TPEEVANLACFLSS-DKSGYINGRVFVIDGGLS  250 (251)
T ss_dssp             CHHHHHHHHHHHHS-GGGTTCCSCEEEESTTSC
T ss_pred             CHHHHHHHHHHHhC-chhCCCcCcEEEECCCcC
Confidence            99999999999997 888999999999999854

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=100.00  E-value=1.1e-49  Score=353.31  Aligned_cols=245  Identities=23%  Similarity=0.248  Sum_probs=218.8

Q ss_pred             CCCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHH
Q 019722           29 GCPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQF  108 (336)
Q Consensus        29 ~~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~  108 (336)
                      |+++|+||+||||||++|||+++|++|+++|++|++++|++++++++.++++..  +.++.++++|++++++++++++++
T Consensus         2 g~f~L~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~--g~~~~~~~~Dv~~~~~v~~~~~~~   79 (259)
T d2ae2a_           2 GRWNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSK--GFKVEASVCDLSSRSERQELMNTV   79 (259)
T ss_dssp             CTTCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCEEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCcCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCCceEEEeeCCCHHHHHHHHHHH
Confidence            689999999999999999999999999999999999999999999999999876  678999999999999999999999


Q ss_pred             HhcCC-CccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCC
Q 019722          109 HSLNL-PLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGD  185 (336)
Q Consensus       109 ~~~~~-~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~  185 (336)
                      .+.++ ++|+||||||+....  .+.+.++|++++++|+.++|.++|+++|.|+++.     .|+||++||..+..+   
T Consensus        80 ~~~~~~~idilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-----~G~Ii~isS~~~~~~---  151 (259)
T d2ae2a_          80 ANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASE-----RGNVVFISSVSGALA---  151 (259)
T ss_dssp             HHHTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTS-----SEEEEEECCGGGTSC---
T ss_pred             HHHhCCCceEEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhc-----ccccccccccccccc---
Confidence            88876 799999999976554  6788999999999999999999999999999876     589999999988776   


Q ss_pred             cccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccch------hHHHHHHH
Q 019722          186 MIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREG------FITDLVFF  259 (336)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~------~~~~~~~~  259 (336)
                                    .+....|+++|+++++|+|+++.|+++.|  ||||+|+||+|+|+|.+....      ...+....
T Consensus       152 --------------~~~~~~Y~asKaal~~lt~~lA~el~~~g--IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~  215 (259)
T d2ae2a_         152 --------------VPYEAVYGATKGAMDQLTRCLAFEWAKDN--IRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDR  215 (259)
T ss_dssp             --------------CTTCHHHHHHHHHHHHHHHHHHHHTGGGT--EEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHT
T ss_pred             --------------cccccchHHHHHHHHHHHHHHHHHhCcCc--eEEEEeeeCcccCHHHHhhhhchhhHHHHHHHHhc
Confidence                          77788999999999999999999999988  999999999999998765421      12223334


Q ss_pred             HHHhhcCChHHHHHHHHHHHhcCccccCCceeeccCccccc
Q 019722          260 LTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWT  300 (336)
Q Consensus       260 ~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~  300 (336)
                      .+..+..+|+|+|..++||++ +.++|+||+.+.+||+...
T Consensus       216 ~pl~R~g~pedvA~~v~fL~S-~~s~~itG~~i~VDGG~~a  255 (259)
T d2ae2a_         216 CALRRMGEPKELAAMVAFLCF-PAASYVTGQIIYVDGGLMA  255 (259)
T ss_dssp             STTCSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTGGG
T ss_pred             CCCCCCcCHHHHHHHHHHHhC-chhCCCcCcEEEECCCeEe
Confidence            456678899999999999997 8889999999999998644

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=100.00  E-value=7.6e-50  Score=353.92  Aligned_cols=243  Identities=23%  Similarity=0.250  Sum_probs=217.0

Q ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhc
Q 019722           32 NLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSL  111 (336)
Q Consensus        32 ~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  111 (336)
                      .|+||++|||||++|||+++|++|+++|++|++++|+.+++++..+++....++.++.+++||++|+++++++++++.+.
T Consensus         1 rl~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~   80 (258)
T d1iy8a_           1 RFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTER   80 (258)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHHH
Confidence            47999999999999999999999999999999999999999999999988877889999999999999999999999999


Q ss_pred             CCCccEEEEcccCCCC---CCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccc
Q 019722          112 NLPLNLLINNAGKFAH---QHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIR  188 (336)
Q Consensus       112 ~~~id~lv~nAg~~~~---~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~  188 (336)
                      +|+||+||||||+...   ..+.+.++|++++++|+.++|+++|+++|.|++++     .|+||++||.++..+      
T Consensus        81 ~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~-----~G~Ii~isS~~~~~~------  149 (258)
T d1iy8a_          81 FGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQG-----SGMVVNTASVGGIRG------  149 (258)
T ss_dssp             HSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-----CCEEEEECCGGGTSB------
T ss_pred             hCCCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhc-----CCCCcccccHhhccC------
Confidence            9999999999997643   25778999999999999999999999999999876     699999999988876      


Q ss_pred             ccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccch---------hHHHHHHH
Q 019722          189 YLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREG---------FITDLVFF  259 (336)
Q Consensus       189 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~---------~~~~~~~~  259 (336)
                                 .+....|++||+++.+|+++|+.|+++.|  ||||+|+||+|+|+|.+....         ........
T Consensus       150 -----------~~~~~~Y~asKaal~~lt~~lA~el~~~g--IrVN~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~  216 (258)
T d1iy8a_         150 -----------IGNQSGYAAAKHGVVGLTRNSAVEYGRYG--IRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQV  216 (258)
T ss_dssp             -----------CSSBHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTT
T ss_pred             -----------CCCchHHHHHHHHHHHHHHHHHHHhCccC--ceEEEEeeCcccCHHHHHHHhhcCcccHHHHHHHHHhc
Confidence                       77889999999999999999999999988  999999999999998765311         11122223


Q ss_pred             HHHhhcCChHHHHHHHHHHHhcCccccCCceeeccCcccc
Q 019722          260 LTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAW  299 (336)
Q Consensus       260 ~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  299 (336)
                      .+..+..+|+|+|..++||++ +.++++||+.+.+||+..
T Consensus       217 ~pl~R~~~p~dvA~~v~fL~S-~~s~~itG~~i~VDGG~s  255 (258)
T d1iy8a_         217 NPSKRYGEAPEIAAVVAFLLS-DDASYVNATVVPIDGGQS  255 (258)
T ss_dssp             CTTCSCBCHHHHHHHHHHHTS-GGGTTCCSCEEEESTTTT
T ss_pred             CCCCCCcCHHHHHHHHHHHhC-chhcCCcCceEEcCcchh
Confidence            345667899999999999997 888999999999999864

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=7.5e-50  Score=353.38  Aligned_cols=242  Identities=22%  Similarity=0.246  Sum_probs=218.2

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      -++|+||++|||||++|||+++|++|+++|++|++++|+.++++++.+++++.  +.++.+++||++++++++++++++.
T Consensus         6 ~m~L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~~--g~~~~~~~~Dvs~~~~~~~~~~~~~   83 (255)
T d1fmca_           6 NLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQL--GGQAFACRCDITSEQELSALADFAI   83 (255)
T ss_dssp             GGCCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHc--CCcEEEEEccCCCHHHHHHHHHHHH
Confidence            35789999999999999999999999999999999999999999999999876  5689999999999999999999999


Q ss_pred             hcCCCccEEEEcccCCCCC-CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccc
Q 019722          110 SLNLPLNLLINNAGKFAHQ-HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIR  188 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~~~-~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~  188 (336)
                      +.+|++|+||||||+.... .+.+.++|++++++|+.++++++|+++|+|.+++     +|+||++||.++..+      
T Consensus        84 ~~~g~iDilvnnAG~~~~~~~e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-----~g~Ii~isS~~~~~~------  152 (255)
T d1fmca_          84 SKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNG-----GGVILTITSMAAENK------  152 (255)
T ss_dssp             HHHSSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-----CEEEEEECCGGGTCC------
T ss_pred             HHcCCCCEeeeCCcCCCCCcccCCHHHHHHHHHHHHHHhhhhHHHHHhhhcccc-----ccccccccccchhcc------
Confidence            9999999999999976553 5788999999999999999999999999999986     589999999988776      


Q ss_pred             ccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccc--hhHHHHHHHHHHhhcC
Q 019722          189 YLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRERE--GFITDLVFFLTSKLLK  266 (336)
Q Consensus       189 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~--~~~~~~~~~~~~~~~~  266 (336)
                                 .++..+|++||+++.+|+|+++.|++++|  ||||+|+||+|+|++.+...  +.........+..+..
T Consensus       153 -----------~~~~~~Y~asKaal~~lt~~lA~el~~~g--IrVN~I~PG~i~T~~~~~~~~~e~~~~~~~~~pl~R~g  219 (255)
T d1fmca_         153 -----------NINMTSYASSKAAASHLVRNMAFDLGEKN--IRVNGIAPGAILTDALKSVITPEIEQKMLQHTPIRRLG  219 (255)
T ss_dssp             -----------CTTCHHHHHHHHHHHHHHHHHHHHHHTTT--EEEEEEEECSBCSHHHHTTCCHHHHHHHHHTCSSCSCB
T ss_pred             -----------ccccccchhHHHHHHHHHHHHHHHhCccC--eEEEEeeeCcCcChHhhccCCHHHHHHHHhcCCCCCCc
Confidence                       77888999999999999999999999988  99999999999999876642  2333444455566778


Q ss_pred             ChHHHHHHHHHHHhcCccccCCceeeccCccc
Q 019722          267 TIPQGAATTCYVAIHPRLVNVSGKYFADCNEA  298 (336)
Q Consensus       267 ~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  298 (336)
                      .|+|+|.+++||++ +.++|+||+.+.+||+.
T Consensus       220 ~pedvA~~v~fL~S-~~s~~itG~~i~vDGG~  250 (255)
T d1fmca_         220 QPQDIANAALFLCS-PAASWVSGQILTVSGGG  250 (255)
T ss_dssp             CHHHHHHHHHHHHS-GGGTTCCSCEEEESTTS
T ss_pred             CHHHHHHHHHHHhC-chhcCCcCCEEEECcCc
Confidence            99999999999987 88999999999999984

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=9.8e-50  Score=351.82  Aligned_cols=244  Identities=21%  Similarity=0.261  Sum_probs=216.3

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHh
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHS  110 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  110 (336)
                      ++|+||++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+.. +.++.++++|++++++++++++++.+
T Consensus         1 f~l~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~-g~~~~~~~~Dv~~~~~v~~~~~~~~~   79 (251)
T d1vl8a_           1 FDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKY-GVETMAFRCDVSNYEEVKKLLEAVKE   79 (251)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH-CCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHh-CCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            58999999999999999999999999999999999999999999998887655 56899999999999999999999999


Q ss_pred             cCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccc
Q 019722          111 LNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIR  188 (336)
Q Consensus       111 ~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~  188 (336)
                      .+|+||+||||||+....  .+.+.++|++.+++|+.++|+++|+++|+|++++     .|+||+++|..+...+     
T Consensus        80 ~~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-----~G~Ii~i~S~~~~~~~-----  149 (251)
T d1vl8a_          80 KFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESD-----NPSIINIGSLTVEEVT-----  149 (251)
T ss_dssp             HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCS-----SCEEEEECCGGGTCCC-----
T ss_pred             HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccc-----cccccccccchhcccc-----
Confidence            999999999999976543  6789999999999999999999999999998875     5899999997654421     


Q ss_pred             ccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccc---hhHHHHHHHHHHhhc
Q 019722          189 YLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRERE---GFITDLVFFLTSKLL  265 (336)
Q Consensus       189 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~---~~~~~~~~~~~~~~~  265 (336)
                                 .++..+|++||+++++|+|+|+.|+++.|  ||||+|+||+++|+|.+...   +.........+..+.
T Consensus       150 -----------~~~~~~Y~asKaal~~lt~~lA~e~~~~g--IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl~R~  216 (251)
T d1vl8a_         150 -----------MPNISAYAASKGGVASLTKALAKEWGRYG--IRVNVIAPGWYRTKMTEAVFSDPEKLDYMLKRIPLGRT  216 (251)
T ss_dssp             -----------SSSCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECCBCSTTTHHHHTCHHHHHHHHHTCTTSSC
T ss_pred             -----------CccccchHHHHHhHHHHHHHHHHHhcccC--eEEEEEeeCcccCHHHHhccCCHHHHHHHHhcCCCCCC
Confidence                       56678899999999999999999999988  99999999999999987653   233334444556778


Q ss_pred             CChHHHHHHHHHHHhcCccccCCceeeccCcccc
Q 019722          266 KTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAW  299 (336)
Q Consensus       266 ~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  299 (336)
                      .+|+|+|..++||++ +.++|+||+.+.+||+..
T Consensus       217 ~~pedvA~~v~fL~S-~~a~~itG~~i~vDGG~t  249 (251)
T d1vl8a_         217 GVPEDLKGVAVFLAS-EEAKYVTGQIIFVDGGWT  249 (251)
T ss_dssp             BCGGGGHHHHHHHHS-GGGTTCCSCEEEESTTGG
T ss_pred             CCHHHHHHHHHHHhC-chhCCCcCcEEEeCcCee
Confidence            899999999999997 888999999999999864

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=7e-50  Score=351.10  Aligned_cols=238  Identities=24%  Similarity=0.338  Sum_probs=214.3

Q ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhc
Q 019722           32 NLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSL  111 (336)
Q Consensus        32 ~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  111 (336)
                      ||+||++|||||++|||+++|+.|+++|++|++++|+++.++++.+++     +.++.++++|++++++++++++++.+.
T Consensus         1 dl~gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~~   75 (243)
T d1q7ba_           1 NFEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYL-----GANGKGLMLNVTDPASIESVLEKIRAE   75 (243)
T ss_dssp             CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH-----GGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh-----CCCCcEEEEEecCHHHhhhhhhhhhcc
Confidence            689999999999999999999999999999999999999998888877     347889999999999999999999999


Q ss_pred             CCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcccc
Q 019722          112 NLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRY  189 (336)
Q Consensus       112 ~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~  189 (336)
                      +|+||+||||||.....  .+.+.++|++++++|+.+++.++|+++|+|++++     .|+||++||.++..+       
T Consensus        76 ~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-----~G~II~isS~~~~~~-------  143 (243)
T d1q7ba_          76 FGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKR-----HGRIITIGSVVGTMG-------  143 (243)
T ss_dssp             TCSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-----CEEEEEECCHHHHHC-------
T ss_pred             cCCcceehhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcC-----CCEeeeecchhhcCC-------
Confidence            99999999999977654  6788999999999999999999999999999876     599999999988876       


Q ss_pred             cccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchh-HHHHHHHHHHhhcCCh
Q 019722          190 LGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGF-ITDLVFFLTSKLLKTI  268 (336)
Q Consensus       190 ~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~-~~~~~~~~~~~~~~~~  268 (336)
                                .+...+|++||+|+++|+|+++.|+++.|  ||||+|+||+++|+|.+..... ........+..+..+|
T Consensus       144 ----------~~~~~~Y~asKaal~~lt~~lA~ela~~g--IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~pl~R~~~p  211 (243)
T d1q7ba_         144 ----------NGGQANYAAAKAGLIGFSKSLAREVASRG--ITVNVVAPGFIETDMTRALSDDQRAGILAQVPAGRLGGA  211 (243)
T ss_dssp             ----------CTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCHHHHTSCHHHHHHHHTTCTTSSCBCH
T ss_pred             ----------CCCCHHHHHHHHHHHHHHHHHHHHhCccC--eEEEEEecceEechhhhhhhhhHHHHHHhcCCCCCCCCH
Confidence                      77788999999999999999999999998  9999999999999998776432 2333334556677899


Q ss_pred             HHHHHHHHHHHhcCccccCCceeeccCcccc
Q 019722          269 PQGAATTCYVAIHPRLVNVSGKYFADCNEAW  299 (336)
Q Consensus       269 ~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  299 (336)
                      +|+|..++||++ +.++|+||+.+.++|+..
T Consensus       212 edvA~~v~fL~S-~~s~~itGq~i~vdGG~~  241 (243)
T d1q7ba_         212 QEIANAVAFLAS-DEAAYITGETLHVNGGMY  241 (243)
T ss_dssp             HHHHHHHHHHHS-GGGTTCCSCEEEESTTSS
T ss_pred             HHHHHHHHHHhC-chhcCCcCCeEEECCCeE
Confidence            999999999997 888999999999999753

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=1.3e-49  Score=352.62  Aligned_cols=246  Identities=18%  Similarity=0.181  Sum_probs=197.2

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      .++|+||+||||||++|||+++|++|+++|++|++++|++++++++.+++...  +.++.++.||++++++++++++++.
T Consensus         3 ~F~LkgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~   80 (259)
T d1xq1a_           3 RWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKK--GFQVTGSVCDASLRPEREKLMQTVS   80 (259)
T ss_dssp             TTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTSHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCceEEEeccCCCHHHHHHHHHHHH
Confidence            57899999999999999999999999999999999999999999999999876  5689999999999999999999999


Q ss_pred             hcC-CCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCc
Q 019722          110 SLN-LPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDM  186 (336)
Q Consensus       110 ~~~-~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~  186 (336)
                      +.+ +++|+||||||+....  .+.+.++|++++++|+.+++.++|+++|.|++++     .|+||++||..+..+    
T Consensus        81 ~~~~g~idilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~-----~G~Iv~isS~~~~~~----  151 (259)
T d1xq1a_          81 SMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASG-----CGNIIFMSSIAGVVS----  151 (259)
T ss_dssp             HHHTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-----SCEEEEEC-----------
T ss_pred             HHhCCCcccccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhcccccc-----ccccccccccccccc----
Confidence            887 6899999999976654  6788999999999999999999999999999876     599999999988876    


Q ss_pred             ccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccc--hhHHHHHHHHHHhh
Q 019722          187 IRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRERE--GFITDLVFFLTSKL  264 (336)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~--~~~~~~~~~~~~~~  264 (336)
                                   .+....|+++|+|+.+|+|+++.|+++.|  ||||+|+||+|+|+|.+...  ..........+..+
T Consensus       152 -------------~~~~~~Y~asKaal~~lt~~lA~e~~~~g--IrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~pl~R  216 (259)
T d1xq1a_         152 -------------ASVGSIYSATKGALNQLARNLACEWASDG--IRANAVAPAVIATPLAEAVYDDEFKKVVISRKPLGR  216 (259)
T ss_dssp             ----------------CCHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEECCSCC------------------------
T ss_pred             -------------ccccccccccccchhhhhHHHHHHhcccC--eEEEEeccCcccCHHhhhhchHHHHHHHHhCCCCCC
Confidence                         66778899999999999999999999998  99999999999999987653  22333445667788


Q ss_pred             cCChHHHHHHHHHHHhcCccccCCceeeccCccccccc
Q 019722          265 LKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWTSK  302 (336)
Q Consensus       265 ~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~~~  302 (336)
                      ..+|+|+|..++||++ +.++|+||+.+.+||+.....
T Consensus       217 ~~~pedvA~~v~fL~S-~~s~~iTG~~i~vDGG~s~~g  253 (259)
T d1xq1a_         217 FGEPEEVSSLVAFLCM-PAASYITGQTICVDGGLTVNG  253 (259)
T ss_dssp             -CCGGGGHHHHHHHTS-GGGTTCCSCEEECCCCEEETT
T ss_pred             CcCHHHHHHHHHHHhC-chhcCCcCcEEEeCCCEECCC
Confidence            8999999999999987 889999999999999976653

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=100.00  E-value=6.5e-49  Score=347.74  Aligned_cols=241  Identities=21%  Similarity=0.316  Sum_probs=214.1

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHh
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHS  110 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  110 (336)
                      |.|+||++|||||++|||+++|++|+++|++|++++|+.++++++.+++     +.++.+++||++++++++++++++.+
T Consensus         1 M~L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~-----~~~~~~~~~Dvt~~~~v~~~~~~~~~   75 (256)
T d1k2wa_           1 MRLDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEI-----GPAACAIALDVTDQASIDRCVAELLD   75 (256)
T ss_dssp             CTTTTEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHHHHHH-----CTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-----CCceEEEEeeCCCHHHHHHHHHHHHH
Confidence            5799999999999999999999999999999999999999998888876     56899999999999999999999999


Q ss_pred             cCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccc
Q 019722          111 LNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIR  188 (336)
Q Consensus       111 ~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~  188 (336)
                      .+|+||+||||||+....  .+.+.++|++.+++|+.|+++++|+++|.|.++++    +|+||++||.++..+      
T Consensus        76 ~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~----~g~Iv~isS~~~~~~------  145 (256)
T d1k2wa_          76 RWGSIDILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGR----GGKIINMASQAGRRG------  145 (256)
T ss_dssp             HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTS----CEEEEEECCGGGTSC------
T ss_pred             HhCCccEEEeecccccccccccCCHHHHHhhhceeeeccccchhhccchhHHhcc----CCccccccchhhccc------
Confidence            999999999999976543  67889999999999999999999999998776543    589999999988876      


Q ss_pred             ccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccch------------hHHHH
Q 019722          189 YLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREG------------FITDL  256 (336)
Q Consensus       189 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~------------~~~~~  256 (336)
                                 .+....|++||+++++|+++++.|+++.|  ||||+|+||+++|++.+....            .....
T Consensus       146 -----------~~~~~~Y~asKaal~~lt~~lA~el~~~g--IrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~  212 (256)
T d1k2wa_         146 -----------EALVGVYCATKAAVISLTQSAGLNLIRHG--INVNAIAPGVVDGEHWDGVDAKFADYENLPRGEKKRQV  212 (256)
T ss_dssp             -----------CTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCBCCTTHHHHHHHHHHHHTCCTTHHHHHH
T ss_pred             -----------cccccchhhhhhHHHHHHHHHHHHhcccC--eEEEEEecCCCCchhhhhhhhhhhhhccCChHHHHHHH
Confidence                       77888999999999999999999999988  999999999999999765421            12233


Q ss_pred             HHHHHHhhcCChHHHHHHHHHHHhcCccccCCceeeccCccccc
Q 019722          257 VFFLTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWT  300 (336)
Q Consensus       257 ~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~  300 (336)
                      ....+..+..+|+|+|..++||++ +.++|+||+.+.+||+.+.
T Consensus       213 ~~~~PlgR~~~p~evA~~v~fL~S-~~a~~iTG~~i~vDGG~~m  255 (256)
T d1k2wa_         213 GAAVPFGRMGRAEDLTGMAIFLAT-PEADYIVAQTYNVDGGNWM  255 (256)
T ss_dssp             HHHSTTSSCBCHHHHHHHHHHTTS-GGGTTCCSCEEEESTTSSC
T ss_pred             HhcCCCCCCcCHHHHHHHHHHHhC-chhCCccCceEEECcchhh
Confidence            344556778899999999999987 8889999999999998654

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=100.00  E-value=7.8e-49  Score=347.83  Aligned_cols=244  Identities=24%  Similarity=0.259  Sum_probs=214.2

Q ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCCh-HHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHh
Q 019722           32 NLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSL-KAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHS  110 (336)
Q Consensus        32 ~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~-~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  110 (336)
                      ||+||++|||||++|||+++|++|+++|++|++++|+. +.++++.+++++.  +.++.++++|++++++++++++++.+
T Consensus         4 dL~gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~--g~~~~~~~~Dvt~~~~v~~~~~~~~~   81 (261)
T d1geea_           4 DLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKV--GGEAIAVKGDVTVESDVINLVQSAIK   81 (261)
T ss_dssp             GGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            69999999999999999999999999999999999985 4677778888765  56899999999999999999999999


Q ss_pred             cCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccc
Q 019722          111 LNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIR  188 (336)
Q Consensus       111 ~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~  188 (336)
                      .+|+||+||||||+....  .+.+.++|++++++|+.++++++|+++|+|.+++.    +++||++||.++..+      
T Consensus        82 ~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~----g~~Iv~isS~~~~~~------  151 (261)
T d1geea_          82 EFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDI----KGTVINMSSVHEKIP------  151 (261)
T ss_dssp             HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTC----CCEEEEECCGGGTSC------
T ss_pred             HhCCCCEeeccceecCCcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhccccc----cccccccccchhccc------
Confidence            999999999999986654  67899999999999999999999999999988753    356999999988776      


Q ss_pred             ccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccc---hhHHHHHHHHHHhhc
Q 019722          189 YLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRERE---GFITDLVFFLTSKLL  265 (336)
Q Consensus       189 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~---~~~~~~~~~~~~~~~  265 (336)
                                 .+...+|++||+++++|+++|+.|++++|  ||||+|+||+|+|++.....   +.........+..+.
T Consensus       152 -----------~~~~~~Y~asKaal~~lt~~lA~e~~~~g--IrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~pl~R~  218 (261)
T d1geea_         152 -----------WPLFVHYAASKGGMKLMTETLALEYAPKG--IRVNNIGPGAINTPINAEKFADPEQRADVESMIPMGYI  218 (261)
T ss_dssp             -----------CTTCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECSBCSGGGHHHHHSHHHHHHHHTTCTTSSC
T ss_pred             -----------CccccccccCCccchhhHHHHHHHhhhhC--cEEEEEeeCcCcCHhHhhhcCCHHHHHHHHhcCCCCCC
Confidence                       77888999999999999999999999998  99999999999999976642   122222333455677


Q ss_pred             CChHHHHHHHHHHHhcCccccCCceeeccCcccccc
Q 019722          266 KTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWTS  301 (336)
Q Consensus       266 ~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~~  301 (336)
                      ..|+|+|.+++||++ +.++++||+.+.+||+....
T Consensus       219 ~~pediA~~v~fL~S-~~s~~itG~~i~vDGG~sl~  253 (261)
T d1geea_         219 GEPEEIAAVAAWLAS-SEASYVTGITLFADGGMTLY  253 (261)
T ss_dssp             BCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTGGGC
T ss_pred             CCHHHHHHHHHHHhC-chhcCCcCCeEEECCCeeCC
Confidence            899999999999997 88899999999999986554

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=9.8e-49  Score=343.53  Aligned_cols=236  Identities=23%  Similarity=0.243  Sum_probs=212.7

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHh
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHS  110 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  110 (336)
                      ..|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++     +.++.++++|++++++++++++++.+
T Consensus         2 G~L~gK~alITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~   76 (244)
T d1nffa_           2 GRLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAEL-----ADAARYVHLDVTQPAQWKAAVDTAVT   76 (244)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT-----GGGEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-----hCcceEEEeecCCHHHHHHHHHHHHH
Confidence            4689999999999999999999999999999999999999888887776     35788999999999999999999999


Q ss_pred             cCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccc
Q 019722          111 LNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIR  188 (336)
Q Consensus       111 ~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~  188 (336)
                      .++++|+||||||+....  .+.+.++|++++++|+.++|+++|++.|.|++++     .|+||++||..+..+      
T Consensus        77 ~~g~idilinnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-----~G~Ii~isS~~~~~~------  145 (244)
T d1nffa_          77 AFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAG-----RGSIINISSIEGLAG------  145 (244)
T ss_dssp             HHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-----CEEEEEECCGGGTSC------
T ss_pred             HhCCCeEEEECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcC-----cceEEeccccccccc------
Confidence            999999999999976553  7789999999999999999999999999999876     589999999998876      


Q ss_pred             ccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHHHHHHHHhhcCCh
Q 019722          189 YLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSKLLKTI  268 (336)
Q Consensus       189 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~  268 (336)
                                 .+....|+++|+++++|+|++++|+++.|  ||||+|+||+++|+|.....+..    ...+..+..+|
T Consensus       146 -----------~~~~~~Y~asKaal~~ltk~lA~el~~~g--IrVN~I~PG~i~T~~~~~~~~~~----~~~pl~R~~~p  208 (244)
T d1nffa_         146 -----------TVACHGYTATKFAVRGLTKSTALELGPSG--IRVNSIHPGLVKTPMTDWVPEDI----FQTALGRAAEP  208 (244)
T ss_dssp             -----------CTTBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCBCSGGGTTSCTTC----SCCSSSSCBCH
T ss_pred             -----------cccccchhhHHHHHHHHHHHHHHHhcccC--EEEEEEeeCCccChhHhhhhHHH----HhccccCCCCH
Confidence                       77888999999999999999999999998  99999999999999987654322    22345667899


Q ss_pred             HHHHHHHHHHHhcCccccCCceeeccCccccc
Q 019722          269 PQGAATTCYVAIHPRLVNVSGKYFADCNEAWT  300 (336)
Q Consensus       269 ~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~  300 (336)
                      +|+|..++||++ +.++++||+.+.+||+...
T Consensus       209 ~diA~~v~fL~s-~~s~~itG~~i~vDGG~~a  239 (244)
T d1nffa_         209 VEVSNLVVYLAS-DESSYSTGAEFVVDGGTVA  239 (244)
T ss_dssp             HHHHHHHHHHHS-GGGTTCCSCEEEESTTGGG
T ss_pred             HHHHHHHHHHhC-hhhCCCcCCEEEECCCeec
Confidence            999999999997 8889999999999998643

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=100.00  E-value=1.4e-48  Score=346.56  Aligned_cols=241  Identities=27%  Similarity=0.253  Sum_probs=207.6

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCC-hHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhc
Q 019722           33 LSSVTAIITGATSGIGAETARVLAKRGARLVLPARS-LKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSL  111 (336)
Q Consensus        33 l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~-~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  111 (336)
                      |+||+||||||++|||+++|++|+++|++|++++|+ .+.++++.+++.+.. +.++.++++|++++++++++++++.+.
T Consensus         2 L~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~-g~~~~~~~~Dv~~~~~v~~~~~~~~~~   80 (260)
T d1x1ta1           2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQH-GVKVLYDGADLSKGEAVRGLVDNAVRQ   80 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHH-TSCEEEECCCTTSHHHHHHHHHHHHHH
T ss_pred             CCcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHhc-CCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            689999999999999999999999999999999997 566777777776654 568999999999999999999999999


Q ss_pred             CCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcccc
Q 019722          112 NLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRY  189 (336)
Q Consensus       112 ~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~  189 (336)
                      +|+||+||||||+....  .+.+.++|++++++|+.++++++|+++|+|++++     .|+||++||.++..+       
T Consensus        81 ~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~-----~G~Iv~isS~~~~~~-------  148 (260)
T d1x1ta1          81 MGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQG-----FGRIINIASAHGLVA-------  148 (260)
T ss_dssp             HSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-----CEEEEEECCGGGTSC-------
T ss_pred             hCCCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcC-----CceEeecccccceec-------
Confidence            99999999999976554  6788999999999999999999999999999876     589999999998876       


Q ss_pred             cccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchh-------------HHHH
Q 019722          190 LGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGF-------------ITDL  256 (336)
Q Consensus       190 ~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~-------------~~~~  256 (336)
                                .+++..|++||+++++|+++++.|+++.|  ||||+|+||+|+|+|.+.....             ....
T Consensus       149 ----------~~~~~~Y~asKaal~~lt~~lA~el~~~g--IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (260)
T d1x1ta1         149 ----------SANKSAYVAAKHGVVGFTKVTALETAGQG--ITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELL  216 (260)
T ss_dssp             ----------CTTCHHHHHHHHHHHHHHHHHHHHHTTTT--EEEEEEEECCBCC------------------------CH
T ss_pred             ----------cCCcchhhhhhhhHHHhHHHHHHHhchhC--cEEEEEecCCCCChhhhhhhhhhhhhcCCChHHHHHHHH
Confidence                      67788999999999999999999999988  9999999999999998764211             1112


Q ss_pred             HHHHHHhhcCChHHHHHHHHHHHhcCccccCCceeeccCcccc
Q 019722          257 VFFLTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAW  299 (336)
Q Consensus       257 ~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  299 (336)
                      ....+..+..+|+|+|..++||++ +.++|+||+.+.+||+..
T Consensus       217 ~~~~Pl~R~g~pediA~~v~fL~S-~~a~~itG~~i~vDGG~t  258 (260)
T d1x1ta1         217 SEKQPSLQFVTPEQLGGTAVFLAS-DAAAQITGTTVSVDGGWT  258 (260)
T ss_dssp             HHHCTTCCCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTGG
T ss_pred             HhcCCCCCCcCHHHHHHHHHHHhC-hhhCCCcCCEEEECcchh
Confidence            334456678899999999999997 888999999999999854

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=100.00  E-value=2.9e-49  Score=348.95  Aligned_cols=242  Identities=25%  Similarity=0.192  Sum_probs=212.2

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHh
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHS  110 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  110 (336)
                      +||+||+||||||++|||+++|++|+++|++|++++|+.+++++..+++     +.++.++++|++++++++++++++.+
T Consensus         1 ndL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~   75 (254)
T d1hdca_           1 NDLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL-----GDAARYQHLDVTIEEDWQRVVAYARE   75 (254)
T ss_dssp             CCCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT-----GGGEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-----CCceEEEEcccCCHHHHHHHHHHHHH
Confidence            5799999999999999999999999999999999999998888776655     46899999999999999999999999


Q ss_pred             cCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccc
Q 019722          111 LNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIR  188 (336)
Q Consensus       111 ~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~  188 (336)
                      .+|++|+||||||+....  .+.+.++|++++++|+.++++++|+++|+|++++     .|+||++||.++..+      
T Consensus        76 ~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~-----~G~II~isS~~~~~~------  144 (254)
T d1hdca_          76 EFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAG-----GGSIVNISSAAGLMG------  144 (254)
T ss_dssp             HHSCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-----CEEEEEECCGGGTSC------
T ss_pred             HcCCccEEEecCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcC-----CCeecccccchhccc------
Confidence            999999999999986654  6788999999999999999999999999999876     599999999988776      


Q ss_pred             ccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccch-hHHHHHHHHHHhhcC-
Q 019722          189 YLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREG-FITDLVFFLTSKLLK-  266 (336)
Q Consensus       189 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~-~~~~~~~~~~~~~~~-  266 (336)
                                 .++..+|++||+++.+|+|+|+.|+++.|  ||||+|+||+|+|+|..+... .........+..+.. 
T Consensus       145 -----------~~~~~~Y~asKaal~~lt~~lA~e~a~~g--IrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~pl~R~g~  211 (254)
T d1hdca_         145 -----------LALTSSYGASKWGVRGLSKLAAVELGTDR--IRVNSVHPGMTYTPMTAETGIRQGEGNYPNTPMGRVGN  211 (254)
T ss_dssp             -----------CTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCHHHHHHTCCCSTTSCTTSTTSSCB-
T ss_pred             -----------ccchhhHHHHHHHHHHHHHHHHHHhCCCc--eEEEEeeeCcccCccchhcCHHHHHHHHhCCCCCCCCC
Confidence                       77788999999999999999999999988  999999999999998765421 111222233444554 


Q ss_pred             ChHHHHHHHHHHHhcCccccCCceeeccCccccccc
Q 019722          267 TIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWTSK  302 (336)
Q Consensus       267 ~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~~~  302 (336)
                      .|+|+|.+++||++ +.++|+||+.+.+||+....+
T Consensus       212 ~PedvA~~v~fL~S-~~a~~itG~~i~vDGG~t~gp  246 (254)
T d1hdca_         212 EPGEIAGAVVKLLS-DTSSYVTGAELAVDGGWTTGP  246 (254)
T ss_dssp             CHHHHHHHHHHHHS-GGGTTCCSCEEEESTTTTTSC
T ss_pred             CHHHHHHHHHHHhc-hhhCCCCCceEEeCCCccCCC
Confidence            58999999999997 888999999999999866543

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=100.00  E-value=2.5e-48  Score=344.77  Aligned_cols=239  Identities=23%  Similarity=0.239  Sum_probs=213.3

Q ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhc
Q 019722           32 NLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSL  111 (336)
Q Consensus        32 ~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  111 (336)
                      .|+||+||||||++|||+++|+.|+++|++|++++|+++.++++.++++..  +.++.+++||++++++++++++++.+.
T Consensus         2 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~--g~~~~~~~~Dv~~~~~v~~~~~~~~~~   79 (260)
T d1zema1           2 KFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREK--GVEARSYVCDVTSEEAVIGTVDSVVRD   79 (260)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT--TSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            489999999999999999999999999999999999999999999998775  668999999999999999999999999


Q ss_pred             CCCccEEEEcccCCCC---CCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccc
Q 019722          112 NLPLNLLINNAGKFAH---QHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIR  188 (336)
Q Consensus       112 ~~~id~lv~nAg~~~~---~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~  188 (336)
                      +|++|+||||||+...   ..+.+.++|++++++|+.++++++|+++|.|.+++     .|+||++||.++..+      
T Consensus        80 ~g~iDilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~-----~G~II~isS~~~~~~------  148 (260)
T d1zema1          80 FGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQN-----YGRIVNTASMAGVKG------  148 (260)
T ss_dssp             HSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-----CEEEEEECCHHHHSC------
T ss_pred             hCCCCeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhhc-----CCCCCeeechhhccC------
Confidence            9999999999997643   26789999999999999999999999999999876     599999999988876      


Q ss_pred             ccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccc-----------------h
Q 019722          189 YLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRERE-----------------G  251 (336)
Q Consensus       189 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~-----------------~  251 (336)
                                 .+.+..|++||+++++|+|+++.|+++.|  ||||+|+||+|+|++..+..                 .
T Consensus       149 -----------~~~~~~Y~asKaal~~ltk~lA~el~~~g--IrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~  215 (260)
T d1zema1         149 -----------PPNMAAYGTSKGAIIALTETAALDLAPYN--IRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKV  215 (260)
T ss_dssp             -----------CTTBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHH
T ss_pred             -----------CcchHHHHHHHHHHHHHHHHHHHHhhhhC--CEEEEeccCcccCcchhhcchhhhhhhcccccccCHHH
Confidence                       77888999999999999999999999998  99999999999999854321                 1


Q ss_pred             hHHHHHHHHHHhhcCChHHHHHHHHHHHhcCccccCCceeeccCcc
Q 019722          252 FITDLVFFLTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNE  297 (336)
Q Consensus       252 ~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~  297 (336)
                      .........+..+...|+|+|..++||++ +.++|+||+.+.+||+
T Consensus       216 ~~~~~~~~~Pl~R~g~pedvA~~v~fL~S-~~s~~itG~~i~VDGG  260 (260)
T d1zema1         216 VAQQMIGSVPMRRYGDINEIPGVVAFLLG-DDSSFMTGVNLPIAGG  260 (260)
T ss_dssp             HHHHHHHTSTTSSCBCGGGSHHHHHHHHS-GGGTTCCSCEEEESCC
T ss_pred             HHHHHHhcCCCCCCcCHHHHHHHHHHHhC-chhcCccCCeEEeCCC
Confidence            12223334456677899999999999998 8889999999999885

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=100.00  E-value=1.4e-48  Score=346.03  Aligned_cols=238  Identities=28%  Similarity=0.333  Sum_probs=211.2

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCC
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNL  113 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  113 (336)
                      .||+||||||++|||+++|++|+++|++|++++|++++++++.+++++.  +.++.++++|++++++++++++++.+.+|
T Consensus         1 DgKValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~--g~~~~~~~~Dvs~~~~v~~~~~~~~~~~g   78 (257)
T d2rhca1           1 DSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREA--GVEADGRTCDVRSVPEIEALVAAVVERYG   78 (257)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEeecCCHHHHHHHHHHHHHHhC
Confidence            4899999999999999999999999999999999999999999999875  56899999999999999999999999999


Q ss_pred             CccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHH--HHHhhccCCCCCeEEEEcCCccccccCCcccc
Q 019722          114 PLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKK--MIETAKATGIQGRIVNVSSSIHSWFSGDMIRY  189 (336)
Q Consensus       114 ~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~--l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~  189 (336)
                      +||+||||||+....  .+.+.++|++++++|+.++++++|+++|+  |.+++     .|+||+++|..+..+       
T Consensus        79 ~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~-----~g~Ii~i~S~~~~~~-------  146 (257)
T d2rhca1          79 PVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERG-----TGRIVNIASTGGKQG-------  146 (257)
T ss_dssp             SCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHT-----EEEEEEECCGGGTSC-------
T ss_pred             CCCEEEecccccCCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcC-----Ccccccccccccccc-------
Confidence            999999999976554  67899999999999999999999999997  44544     489999999988876       


Q ss_pred             cccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccch------------hHHHHH
Q 019722          190 LGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREG------------FITDLV  257 (336)
Q Consensus       190 ~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~------------~~~~~~  257 (336)
                                .+.+..|++||+++.+|+|+|+.|+++.|  ||||+|+||+|+|+|.+....            ......
T Consensus       147 ----------~~~~~~Y~asKaal~~ltk~lA~el~~~g--IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~e~~~~~~  214 (257)
T d2rhca1         147 ----------VVHAAPYSASKHGVVGFTKALGLELARTG--ITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRIT  214 (257)
T ss_dssp             ----------CTTCHHHHHHHHHHHHHHHHHHHHTTTSE--EEEEEEEECSBCSHHHHHHHHHHHHHTTCCHHHHHHHHH
T ss_pred             ----------cccchhHHHHHHHHHHHHHHHHHHhhhhC--cEEEEEeeCCCCCHHHHHHHhhhhhhcccChHHHHHHHH
Confidence                      77888999999999999999999999988  999999999999998765421            122223


Q ss_pred             HHHHHhhcCChHHHHHHHHHHHhcCccccCCceeeccCccc
Q 019722          258 FFLTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEA  298 (336)
Q Consensus       258 ~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  298 (336)
                      ...+..+..+|+|+|..++||++ +.++++||+.+.+||+.
T Consensus       215 ~~~PlgR~~~pedia~~v~fL~S-~~s~~itG~~i~vDGG~  254 (257)
T d2rhca1         215 ARVPIGRYVQPSEVAEMVAYLIG-PGAAAVTAQALNVCGGL  254 (257)
T ss_dssp             TTSTTSSCBCHHHHHHHHHHHTS-GGGTTCCSCEEEESTTC
T ss_pred             hcCCCCCCcCHHHHHHHHHHHhC-chhcCCcCceEEECcCc
Confidence            33445677899999999999997 88899999999999874

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=100.00  E-value=2.7e-48  Score=341.20  Aligned_cols=238  Identities=22%  Similarity=0.278  Sum_probs=212.8

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEee-CChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCCC
Q 019722           36 VTAIITGATSGIGAETARVLAKRGARLVLPA-RSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLP  114 (336)
Q Consensus        36 k~~lItGgs~gIG~aia~~L~~~G~~V~~~~-r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  114 (336)
                      ++||||||++|||+++|++|+++|++|++.+ |+++.++++.++++..  +.++.++++|++++++++++++++.+.+|+
T Consensus         2 pV~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~--g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   79 (244)
T d1edoa_           2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAY--GGQAITFGGDVSKEADVEAMMKTAIDAWGT   79 (244)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHH--TCEEEEEECCTTSHHHHHHHHHHHHHHSSC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHc--CCcEEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence            5899999999999999999999999999874 6778888888888776  678999999999999999999999999999


Q ss_pred             ccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccccccc
Q 019722          115 LNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQ  192 (336)
Q Consensus       115 id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~~  192 (336)
                      +|+||||||.....  .+.+.++|++++++|+.++++++|+++|+|++++     .|+||++||.++..+          
T Consensus        80 iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-----~G~IVnisS~~~~~~----------  144 (244)
T d1edoa_          80 IDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKR-----KGRIINIASVVGLIG----------  144 (244)
T ss_dssp             CSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-----CEEEEEECCTHHHHC----------
T ss_pred             CCccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcC-----CcEEEEEcChhhcCC----------
Confidence            99999999976654  6789999999999999999999999999999876     599999999998877          


Q ss_pred             ccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHH-HHHHHHHHhhcCChHHH
Q 019722          193 ISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFIT-DLVFFLTSKLLKTIPQG  271 (336)
Q Consensus       193 ~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~-~~~~~~~~~~~~~~~~~  271 (336)
                             .++...|++||+|+.+|+|+|+.|+++.|  ||||+|+||+++|+|.+....... ......+..+..+|+|+
T Consensus       145 -------~~~~~~Y~asKaal~~ltk~lA~el~~~g--IrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~pl~R~~~p~dv  215 (244)
T d1edoa_         145 -------NIGQANYAAAKAGVIGFSKTAAREGASRN--INVNVVCPGFIASDMTAKLGEDMEKKILGTIPLGRTGQPENV  215 (244)
T ss_dssp             -------CTTCHHHHHHHHHHHHHHHHHHHHHHTTT--EEEEEEEECSBCSHHHHTTCHHHHHHHHTSCTTCSCBCHHHH
T ss_pred             -------CCCCHHHHHHHHHHHHChHHHHHHHhhhC--cEEEEEecceeccHHHHHhhHHHHHHHHhcCCCCCCcCHHHH
Confidence                   77788999999999999999999999988  999999999999999887654332 23334456678899999


Q ss_pred             HHHHHHHHhcCccccCCceeeccCcccc
Q 019722          272 AATTCYVAIHPRLVNVSGKYFADCNEAW  299 (336)
Q Consensus       272 a~~~~~l~~~~~~~~~~G~~~~~~~~~~  299 (336)
                      |..++||+.++.++|+||+.+.+||+..
T Consensus       216 A~~v~fLa~S~~a~~itG~~i~vdGG~s  243 (244)
T d1edoa_         216 AGLVEFLALSPAASYITGQAFTIDGGIA  243 (244)
T ss_dssp             HHHHHHHHHCSGGGGCCSCEEEESTTTT
T ss_pred             HHHHHHHHCCchhcCCcCCeEEeCCCee
Confidence            9999999877999999999999998753

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=100.00  E-value=1.6e-48  Score=344.08  Aligned_cols=242  Identities=24%  Similarity=0.230  Sum_probs=212.1

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHh
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHS  110 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  110 (336)
                      +.|+||+||||||++|||+++|++|+++|++|++++|+.+.++++.+++..   +.++.++++|++++++++++++++.+
T Consensus         2 nrL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~   78 (251)
T d1zk4a1           2 NRLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGT---PDQIQFFQHDSSDEDGWTKLFDATEK   78 (251)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC---TTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCC---CCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            469999999999999999999999999999999999999999988888754   45899999999999999999999999


Q ss_pred             cCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccc
Q 019722          111 LNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIR  188 (336)
Q Consensus       111 ~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~  188 (336)
                      .+|+||+||||||+....  .+.+.++|++++++|+.++|+++|+++|+|++++.    +++||++||.++..+      
T Consensus        79 ~~G~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~----gg~Ii~isS~~~~~~------  148 (251)
T d1zk4a1          79 AFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGL----GASIINMSSIEGFVG------  148 (251)
T ss_dssp             HHSSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSS----CEEEEEECCGGGTSC------
T ss_pred             HhCCceEEEeccccccccchhcccccchhhhccccccccchhHHHHHHHHHhcCC----CCceEeeeccceecc------
Confidence            999999999999987653  77899999999999999999999999999987652    359999999988776      


Q ss_pred             ccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHH--ccCCCcEEEEEeeCCceeCCCCCccchhHH--HHHHHHHHhh
Q 019722          189 YLGQISRNKSHYDATRAYALSKLANVLHTKELAQRL--KQMEANVTVNCVHPGIVRTRLTREREGFIT--DLVFFLTSKL  264 (336)
Q Consensus       189 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~--~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~--~~~~~~~~~~  264 (336)
                                 .+....|++||+++.+|+++++.|+  ++.|  ||||+|+||+|+|+|.+.......  ......+..+
T Consensus       149 -----------~~~~~~Y~asKaal~~lt~~lA~e~~l~~~g--IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~pl~R  215 (251)
T d1zk4a1         149 -----------DPSLGAYNASKGAVRIMSKSAALDCALKDYD--VRVNTVHPGYIKTPLVDDLPGAEEAMSQRTKTPMGH  215 (251)
T ss_dssp             -----------CTTCHHHHHHHHHHHHHHHHHHHHHHHTTCS--EEEEEEEECCBCCHHHHTSTTHHHHHTSTTTCTTSS
T ss_pred             -----------CCCchhHHHHHHHHhcchHHHHHHHhcCCCc--EEEEEEeCCCCCChhHHhcCCHHHHHHHHhCCCCCC
Confidence                       7778899999999999999999995  4556  999999999999999877543211  1122345566


Q ss_pred             cCChHHHHHHHHHHHhcCccccCCceeeccCcccc
Q 019722          265 LKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAW  299 (336)
Q Consensus       265 ~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  299 (336)
                      ...|+|+|..++||++ +.++|+||+.+.+||+..
T Consensus       216 ~~~pedvA~~v~fL~S-~~s~~itG~~i~vDGG~t  249 (251)
T d1zk4a1         216 IGEPNDIAYICVYLAS-NESKFATGSEFVVDGGYT  249 (251)
T ss_dssp             CBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTGG
T ss_pred             CcCHHHHHHHHHHHhC-chhCCCcCcEEEECcccc
Confidence            7899999999999987 888999999999999854

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=100.00  E-value=4.7e-48  Score=340.31  Aligned_cols=239  Identities=25%  Similarity=0.285  Sum_probs=197.7

Q ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhc
Q 019722           32 NLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSL  111 (336)
Q Consensus        32 ~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  111 (336)
                      .|+||+||||||++|||+++|+.|+++|++|++++|++.+.  ..+.++..  +.++.+++||++++++++++++++.+.
T Consensus         2 rL~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~--~~~~~~~~--g~~~~~~~~Dvs~~~~v~~~~~~~~~~   77 (247)
T d2ew8a1           2 RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPE--AEAAIRNL--GRRVLTVKCDVSQPGDVEAFGKQVIST   77 (247)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHH--HHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHH--HHHHHHHc--CCcEEEEEeeCCCHHHHHHHHHHHHHH
Confidence            48999999999999999999999999999999999987532  22333333  678999999999999999999999999


Q ss_pred             CCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcccc
Q 019722          112 NLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRY  189 (336)
Q Consensus       112 ~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~  189 (336)
                      +|+||+||||||+....  .+.+.++|++++++|+.++++++|+++|.|++++     .|+||++||.++..+       
T Consensus        78 ~G~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-----~G~Iv~isS~~~~~~-------  145 (247)
T d2ew8a1          78 FGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNG-----WGRIINLTSTTYWLK-------  145 (247)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-----CEEEEEECCGGGGSC-------
T ss_pred             cCCCCEEEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcC-----CCCccccccchhccc-------
Confidence            99999999999987654  6789999999999999999999999999999886     589999999988876       


Q ss_pred             cccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhH-HHHHHH--HHHhhcC
Q 019722          190 LGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFI-TDLVFF--LTSKLLK  266 (336)
Q Consensus       190 ~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~-~~~~~~--~~~~~~~  266 (336)
                                .+....|++||+++.+|+++|+.|+++.|  ||||+|+||+++|++.+...... .+....  .+..+..
T Consensus       146 ----------~~~~~~Y~asKaal~~ltk~lA~ela~~g--IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~l~r~~  213 (247)
T d2ew8a1         146 ----------IEAYTHYISTKAANIGFTRALASDLGKDG--ITVNAIAPSLVRTATTEASALSAMFDVLPNMLQAIPRLQ  213 (247)
T ss_dssp             ----------CSSCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCC------------------CTTSSSCSCC
T ss_pred             ----------CcccccchhhhccHHHHHHHHHHHhcccC--eEEEEEeeCCCCCccccccccchhHHHHHHHhccCCCCC
Confidence                      77788999999999999999999999998  99999999999999987642211 111111  1234577


Q ss_pred             ChHHHHHHHHHHHhcCccccCCceeeccCcccc
Q 019722          267 TIPQGAATTCYVAIHPRLVNVSGKYFADCNEAW  299 (336)
Q Consensus       267 ~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  299 (336)
                      +|+|+|..++||++ +.++|+||+.+.+||+..
T Consensus       214 ~pedvA~~v~fL~S-~~s~~itG~~i~vDGG~~  245 (247)
T d2ew8a1         214 VPLDLTGAAAFLAS-DDASFITGQTLAVDGGMV  245 (247)
T ss_dssp             CTHHHHHHHHHHTS-GGGTTCCSCEEEESSSCC
T ss_pred             CHHHHHHHHHHHhC-chhcCCcCCeEEECCCEe
Confidence            99999999999987 788999999999999853

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=100.00  E-value=6.1e-48  Score=341.40  Aligned_cols=239  Identities=23%  Similarity=0.245  Sum_probs=212.3

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCCC
Q 019722           35 SVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLP  114 (336)
Q Consensus        35 gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  114 (336)
                      .|+||||||++|||+++|++|+++|++|++++|++++++++.+++++.  +.++.+++||++++++++++++++.+.+|+
T Consensus         1 KKValITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~--g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   78 (255)
T d1gega_           1 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQA--GGHAVAVKVDVSDRDQVFAAVEQARKTLGG   78 (255)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTSHHHHHHHHHHHHHHTTC
T ss_pred             CCEEEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEeeCCCHHHHHHHHHHHHHHhCC
Confidence            488999999999999999999999999999999999999999999876  568999999999999999999999999999


Q ss_pred             ccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccccccc
Q 019722          115 LNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQ  192 (336)
Q Consensus       115 id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~~  192 (336)
                      ||+||||||+....  .+.+.++|++++++|+.|+++++|+++|.|.+++.    .++||++||.++..+          
T Consensus        79 iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~----~g~Iv~isS~~~~~~----------  144 (255)
T d1gega_          79 FDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGH----GGKIINACSQAGHVG----------  144 (255)
T ss_dssp             CCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTS----CEEEEEECCGGGTSC----------
T ss_pred             ccEEEecccccccCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhcc----ccccccccchhhccc----------
Confidence            99999999976553  67899999999999999999999999999887653    578999999988776          


Q ss_pred             ccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchh------------HHHHHHHH
Q 019722          193 ISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGF------------ITDLVFFL  260 (336)
Q Consensus       193 ~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~------------~~~~~~~~  260 (336)
                             .+....|++||+++++|+|+|+.|+++.|  ||||+|+||+++|+|.......            ........
T Consensus       145 -------~~~~~~Y~asKaal~~ltk~lA~el~~~g--IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (255)
T d1gega_         145 -------NPELAVYSSSKFAVRGLTQTAARDLAPLG--ITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRI  215 (255)
T ss_dssp             -------CTTBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHTTC
T ss_pred             -------CcccccchhCHHHHHhhHHHHHHHhhhhC--cEEEEEecCcccChHHhhhhhhhHhhhcccchhHHHHHHhcC
Confidence                   77888999999999999999999999998  9999999999999987654221            12223334


Q ss_pred             HHhhcCChHHHHHHHHHHHhcCccccCCceeeccCcccc
Q 019722          261 TSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAW  299 (336)
Q Consensus       261 ~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  299 (336)
                      +..+..+|+|+|..++||++ +.++|+||+.+.+||+..
T Consensus       216 pl~R~~~peevA~~v~fL~S-~~a~~itG~~i~vDGG~~  253 (255)
T d1gega_         216 TLGRLSEPEDVAACVSYLAS-PDSDYMTGQSLLIDGGMV  253 (255)
T ss_dssp             TTCSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESSSSS
T ss_pred             CCCCCcCHHHHHHHHHHHhC-chhCCccCcEEEecCCEE
Confidence            55677899999999999997 889999999999999853

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=1.4e-47  Score=336.26  Aligned_cols=237  Identities=22%  Similarity=0.189  Sum_probs=207.8

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHh
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHS  110 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  110 (336)
                      |+|+||++|||||++|||+++|++|+++|++|++++|+++++++..++       .+..+++||++++++++++++++.+
T Consensus         1 M~L~gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~~~-------~~~~~~~~Dv~~~~~v~~~~~~~~~   73 (242)
T d1ulsa_           1 MRLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEA-------VGAHPVVMDVADPASVERGFAEALA   73 (242)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHT-------TTCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH-------cCCeEEEEecCCHHHHHHHHHHHHH
Confidence            579999999999999999999999999999999999999888776654       3567899999999999999999999


Q ss_pred             cCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccc
Q 019722          111 LNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIR  188 (336)
Q Consensus       111 ~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~  188 (336)
                      .+++||+||||||+....  .+.+.++|++++++|+.++++++|+++|.|++++     .++|+++||. +..+      
T Consensus        74 ~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-----~~~i~~~ss~-~~~~------  141 (242)
T d1ulsa_          74 HLGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKN-----PGSIVLTASR-VYLG------  141 (242)
T ss_dssp             HHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC-----CEEEEEECCG-GGGC------
T ss_pred             hcCCceEEEECCcccccCchhhCcchhhhccccccchhhhhhhhhccccccccc-----cceeeeeccc-cccC------
Confidence            999999999999987654  6789999999999999999999999999998865     4666666664 4444      


Q ss_pred             ccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchh-HHHHHHHHHHhhcCC
Q 019722          189 YLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGF-ITDLVFFLTSKLLKT  267 (336)
Q Consensus       189 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~-~~~~~~~~~~~~~~~  267 (336)
                                 .++..+|++||+++++|+|++++|++++|  ||||+|+||+|+|++.+...+. ........+..+..+
T Consensus       142 -----------~~~~~~Y~asKaal~~ltk~lA~ela~~g--IrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~pl~R~~~  208 (242)
T d1ulsa_         142 -----------NLGQANYAASMAGVVGLTRTLALELGRWG--IRVNTLAPGFIETRMTAKVPEKVREKAIAATPLGRAGK  208 (242)
T ss_dssp             -----------CTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCTTTSSSCHHHHHHHHHTCTTCSCBC
T ss_pred             -----------CCCCcchHHHHHHHHHHHHHHHHHHhhhC--cEEEEEeeCcccChhhhcCCHHHHHHHHhcCCCCCCCC
Confidence                       66788999999999999999999999998  9999999999999999887543 334444556677889


Q ss_pred             hHHHHHHHHHHHhcCccccCCceeeccCccccc
Q 019722          268 IPQGAATTCYVAIHPRLVNVSGKYFADCNEAWT  300 (336)
Q Consensus       268 ~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~  300 (336)
                      |+|+|..++||++ +.++|+||+.+.+||+...
T Consensus       209 pedia~~v~fL~S-~~s~~itG~~i~vDGG~t~  240 (242)
T d1ulsa_         209 PLEVAYAALFLLS-DESSFITGQVLFVDGGRTI  240 (242)
T ss_dssp             HHHHHHHHHHHHS-GGGTTCCSCEEEESTTTTT
T ss_pred             HHHHHHHHHHHhc-hhhCCCCCcEEEECCCccC
Confidence            9999999999997 7889999999999998643

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.6e-48  Score=341.27  Aligned_cols=237  Identities=24%  Similarity=0.294  Sum_probs=207.3

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHh
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHS  110 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  110 (336)
                      +.|+||++|||||++|||+++|+.|+++|++|++++|+++.++++.+++      .++.+++||++++++++++++++.+
T Consensus         2 ~rl~GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~------~~~~~~~~Dvs~~~~v~~~~~~~~~   75 (250)
T d1ydea1           2 TRYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQEL------PGAVFILCDVTQEDDVKTLVSETIR   75 (250)
T ss_dssp             CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC------TTEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc------CCCeEEEccCCCHHHHHHHHHHHHH
Confidence            4699999999999999999999999999999999999998887766553      4688999999999999999999999


Q ss_pred             cCCCccEEEEcccCCCCC---CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcc
Q 019722          111 LNLPLNLLINNAGKFAHQ---HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMI  187 (336)
Q Consensus       111 ~~~~id~lv~nAg~~~~~---~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~  187 (336)
                      .+++||+||||||+....   .+.+.++|++++++|+.+++.++|+++|+|+++      +|+||++||.++..+     
T Consensus        76 ~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~------~G~Ii~isS~~~~~~-----  144 (250)
T d1ydea1          76 RFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKS------QGNVINISSLVGAIG-----  144 (250)
T ss_dssp             HHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH------TCEEEEECCHHHHHC-----
T ss_pred             hcCCCCEEEecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhC------CCCCccccccccccc-----
Confidence            999999999999965432   578889999999999999999999999999875      389999999988876     


Q ss_pred             cccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccc-------hhHHHHHHHH
Q 019722          188 RYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRERE-------GFITDLVFFL  260 (336)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~-------~~~~~~~~~~  260 (336)
                                  .+....|+++|+++.+|+|++++|+++.|  ||||+|+||+|+|+|.+...       ....+.....
T Consensus       145 ------------~~~~~~Y~asKaal~~lt~~lA~e~a~~g--IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~  210 (250)
T d1ydea1         145 ------------QAQAVPYVATKGAVTAMTKALALDESPYG--VRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQ  210 (250)
T ss_dssp             ------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTS
T ss_pred             ------------ccCcchhHHHHhhHHHHHHHHHHHhcccC--eEEEEEeeCCCCChhHHHHhhcCCCHHHHHHHHHhcC
Confidence                        67788999999999999999999999998  99999999999999876542       1222223334


Q ss_pred             HHhhcCChHHHHHHHHHHHhcCccccCCceeeccCccccc
Q 019722          261 TSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWT  300 (336)
Q Consensus       261 ~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~  300 (336)
                      +..+..+|+|+|.+++||++ + ++|+||+.+.+||+...
T Consensus       211 pl~R~g~p~eva~~v~fL~S-d-a~~itG~~i~vDGG~~l  248 (250)
T d1ydea1         211 PLGRMGQPAEVGAAAVFLAS-E-ANFCTGIELLVTGGAEL  248 (250)
T ss_dssp             TTSSCBCHHHHHHHHHHHHH-H-CTTCCSCEEEESTTTTS
T ss_pred             CCCCCCCHHHHHHHHHHHhC-c-cCCCcCCeEEECCCccc
Confidence            55677899999999999986 5 68999999999998543

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=100.00  E-value=6.7e-47  Score=337.13  Aligned_cols=243  Identities=24%  Similarity=0.275  Sum_probs=210.6

Q ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhc
Q 019722           32 NLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSL  111 (336)
Q Consensus        32 ~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  111 (336)
                      .|+||+||||||++|||+++|++|+++|++|++++|++++++++.+++..   ..++.+++||++++++++++++++.+.
T Consensus         3 rL~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~   79 (268)
T d2bgka1           3 RLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGS---PDVISFVHCDVTKDEDVRNLVDTTIAK   79 (268)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC---TTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcC---CCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            69999999999999999999999999999999999999999999988865   356889999999999999999999999


Q ss_pred             CCCccEEEEcccCCCCC----CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcc
Q 019722          112 NLPLNLLINNAGKFAHQ----HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMI  187 (336)
Q Consensus       112 ~~~id~lv~nAg~~~~~----~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~  187 (336)
                      +|++|+||||||+....    .+.+.++|++++++|+.|+++++|+++|+|.+++     .|+||+++|..+..+.    
T Consensus        80 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~-----~g~ii~iss~~~~~~~----  150 (268)
T d2bgka1          80 HGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAK-----KGSIVFTASISSFTAG----  150 (268)
T ss_dssp             HSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGT-----CEEEEEECCGGGTCCC----
T ss_pred             cCCcceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcC-----CCCccccccccccccc----
Confidence            99999999999976432    5678899999999999999999999999998876     5899999998877651    


Q ss_pred             cccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHHHHHH------H
Q 019722          188 RYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFL------T  261 (336)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~------~  261 (336)
                                  .+....|++||+++++|+++++.|+++.|  ||||+|+||+++|+|.+.............      +
T Consensus       151 ------------~~~~~~Y~asKaal~~lt~~lA~el~~~g--IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~  216 (268)
T d2bgka1         151 ------------EGVSHVYTATKHAVLGLTTSLCTELGEYG--IRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANL  216 (268)
T ss_dssp             ------------TTSCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTCSS
T ss_pred             ------------cccccccchhHHHHHhCHHHHHHHhChhC--eEEEecCCCCccChHHhhhhcCCHHHHHHHHHhcccc
Confidence                        22345799999999999999999999988  999999999999999887643222222111      2


Q ss_pred             HhhcCChHHHHHHHHHHHhcCccccCCceeeccCcccccc
Q 019722          262 SKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWTS  301 (336)
Q Consensus       262 ~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~~  301 (336)
                      ..+...|+|+|..++||++ +.++|+||+.+.+||+....
T Consensus       217 ~gr~~~pedvA~~v~fL~S-~~s~~itGq~i~VDGG~t~~  255 (268)
T d2bgka1         217 KGTLLRAEDVADAVAYLAG-DESKYVSGLNLVIDGGYTRT  255 (268)
T ss_dssp             CSCCCCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTGGGC
T ss_pred             CCCCcCHHHHHHHHHHHhC-hhhCCccCceEEECcCcccC
Confidence            2467889999999999997 88899999999999986554

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=100.00  E-value=7.5e-47  Score=334.58  Aligned_cols=245  Identities=22%  Similarity=0.248  Sum_probs=213.4

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      .+||+||+||||||++|||+++|++|+++|++|++++|++++++++.++++..  +.+++++.||++++++++++++++.
T Consensus         1 ~f~L~gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~~~~~--~~~~~~~~~D~s~~~~~~~~~~~~~   78 (258)
T d1ae1a_           1 RWSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREK--GLNVEGSVCDLLSRTERDKLMQTVA   78 (258)
T ss_dssp             CCCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CcCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCCceEEEeecCCHHHHHHHHHHHH
Confidence            47899999999999999999999999999999999999999999999988776  5789999999999999999999999


Q ss_pred             hcC-CCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCc
Q 019722          110 SLN-LPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDM  186 (336)
Q Consensus       110 ~~~-~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~  186 (336)
                      +.+ +.+|+||||||.....  .+.+.++|++++++|+.+++.++|++.|.|.++.     .|+||++||.++..+    
T Consensus        79 ~~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~-----~g~ii~isS~~~~~~----  149 (258)
T d1ae1a_          79 HVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQ-----NGNVIFLSSIAGFSA----  149 (258)
T ss_dssp             HHTTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-----SEEEEEECCGGGTSC----
T ss_pred             HHhCCCcEEEeccccccccCccccCCHHHHhhhhhhcccccccccccccccccccc-----ccccccccccccccc----
Confidence            888 6899999999977654  6789999999999999999999999999999887     699999999998876    


Q ss_pred             ccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccc-------hhHHHHHHH
Q 019722          187 IRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRERE-------GFITDLVFF  259 (336)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~-------~~~~~~~~~  259 (336)
                                   .+....|+++|+++++|+|.+++|+++.|  ||||+|+||+++|+|.+...       +........
T Consensus       150 -------------~~~~~~Y~~sK~al~~lt~~lA~el~~~g--IrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~  214 (258)
T d1ae1a_         150 -------------LPSVSLYSASKGAINQMTKSLACEWAKDN--IRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVK  214 (258)
T ss_dssp             -------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBC-------------CHHHHHHHHHH
T ss_pred             -------------cccchhHHHHHHHHHHHHHHHHHhcCcCc--EEEEEEeeCcccCcchhhhhhhhhhhHHHHHHHHhc
Confidence                         77888999999999999999999999988  99999999999999977652       223333344


Q ss_pred             HHHhhcCChHHHHHHHHHHHhcCccccCCceeeccCcccccc
Q 019722          260 LTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWTS  301 (336)
Q Consensus       260 ~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~~  301 (336)
                      .+..+..+|+|+|.+++||++ +.++++||+.+.+||+....
T Consensus       215 ~plgR~~~pediA~~v~fL~S-~~s~~itG~~i~vDGG~s~~  255 (258)
T d1ae1a_         215 TPMGRAGKPQEVSALIAFLCF-PAASYITGQIIWADGGFTAN  255 (258)
T ss_dssp             STTCSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTGGGC
T ss_pred             CCCCCCcCHHHHHHHHHHHhC-hhhCCCcCcEEEeCCCeecc
Confidence            455678899999999999997 88899999999999986543

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=4.3e-48  Score=338.29  Aligned_cols=231  Identities=23%  Similarity=0.337  Sum_probs=201.2

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      .|+|+||++|||||++|||+++|++|+++|++|++++|+.+.             ..++..+++|++|+++++++++++.
T Consensus         2 ~psl~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~-------------~~~~~~~~~Dv~~~~~v~~~~~~~~   68 (237)
T d1uzma1           2 KPPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGA-------------PKGLFGVEVDVTDSDAVDRAFTAVE   68 (237)
T ss_dssp             CCCCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCC-------------CTTSEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcch-------------hcCceEEEEecCCHHHHHHHHHHHH
Confidence            468999999999999999999999999999999999998643             3467889999999999999999999


Q ss_pred             hcCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcc
Q 019722          110 SLNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMI  187 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~  187 (336)
                      +.+++||+||||||+....  .+.+.++|++++++|+.+++.++|+++|+|++++     .|+||++||.++..+     
T Consensus        69 ~~~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-----~g~Iv~isS~~~~~~-----  138 (237)
T d1uzma1          69 EHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNK-----FGRMIFIGSVSGLWG-----  138 (237)
T ss_dssp             HHHSSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-----CEEEEEECCCCC--------
T ss_pred             HhcCCceEEEeeecccccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccC-----CCceEEEcchhhccC-----
Confidence            9999999999999976554  6788999999999999999999999999999876     589999999988876     


Q ss_pred             cccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhH-HHHHHHHHHhhcC
Q 019722          188 RYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFI-TDLVFFLTSKLLK  266 (336)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~-~~~~~~~~~~~~~  266 (336)
                                  .++..+|++||+|+++|+|+++.|+++.|  ||||+|+||+|+|+|.+...+.. .......+..+..
T Consensus       139 ------------~~~~~~Y~asKaal~~lt~~lA~e~~~~g--IrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~pl~R~~  204 (237)
T d1uzma1         139 ------------IGNQANYAASKAGVIGMARSIARELSKAN--VTANVVAPGYIDTDMTRALDERIQQGALQFIPAKRVG  204 (237)
T ss_dssp             --------------CCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCHHHHHSCHHHHHHHGGGCTTCSCB
T ss_pred             ------------CcccHHHHHHHHHHHHHHHHHHhhhhcCC--ceeeeeeeCcCCChhhhccCHHHHHHHHhcCCCCCCc
Confidence                        67788999999999999999999999988  99999999999999987764332 2333345566788


Q ss_pred             ChHHHHHHHHHHHhcCccccCCceeeccCccc
Q 019722          267 TIPQGAATTCYVAIHPRLVNVSGKYFADCNEA  298 (336)
Q Consensus       267 ~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  298 (336)
                      .|+|+|..++||++ +.++|+||+.+.+||+.
T Consensus       205 ~pedvA~~v~fL~S-~~s~~itG~~i~vdGG~  235 (237)
T d1uzma1         205 TPAEVAGVVSFLAS-EDASYISGAVIPVDGGM  235 (237)
T ss_dssp             CHHHHHHHHHHHHS-GGGTTCCSCEEEESTTT
T ss_pred             CHHHHHHHHHHHhC-chhcCCcCCeEEECCCC
Confidence            99999999999997 78899999999999874

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=2e-47  Score=339.87  Aligned_cols=243  Identities=22%  Similarity=0.254  Sum_probs=204.7

Q ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhC-CCCceEEEeccCCCHHHHHHHHHHHHh
Q 019722           32 NLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDC-PGSDIVVLPLDLSSLSSVRNFVSQFHS  110 (336)
Q Consensus        32 ~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~~Dl~~~~~v~~~~~~~~~  110 (336)
                      .|+||+||||||++|||+++|++|+++|++|++++|+.++++++.+++++.. .+.++.++++|++++++++++++++.+
T Consensus         2 rl~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~   81 (264)
T d1spxa_           2 RFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLG   81 (264)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHH
Confidence            5899999999999999999999999999999999999999999999998763 345799999999999999999999999


Q ss_pred             cCCCccEEEEcccCCCCC------CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCcc-cccc
Q 019722          111 LNLPLNLLINNAGKFAHQ------HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIH-SWFS  183 (336)
Q Consensus       111 ~~~~id~lv~nAg~~~~~------~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~-~~~~  183 (336)
                      .+|+||+||||||...+.      .+.+.++|++++++|+.+++.++|+++|+|+++.      |++|+++|..+ ..+ 
T Consensus        82 ~~g~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~~------g~iI~~~S~~~~~~~-  154 (264)
T d1spxa_          82 KFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK------GEIVNISSIASGLHA-  154 (264)
T ss_dssp             HHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT------CEEEEECCTTSSSSC-
T ss_pred             HhCCCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCcccccc------Ccceeeeeecccccc-
Confidence            999999999999975432      4457789999999999999999999999998764      78888888664 444 


Q ss_pred             CCcccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccch----------hH
Q 019722          184 GDMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREG----------FI  253 (336)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~----------~~  253 (336)
                                      .+....|++||+|+++|+|+|+.|+++.|  ||||+|+||+|+|+|.+....          ..
T Consensus       155 ----------------~~~~~~Y~asKaal~~lt~~lA~el~~~g--IrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~  216 (264)
T d1spxa_         155 ----------------TPDFPYYSIAKAAIDQYTRNTAIDLIQHG--IRVNSISPGLVATGFGSAMGMPEETSKKFYSTM  216 (264)
T ss_dssp             ----------------CTTSHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECCBCCCC--------------HHHH
T ss_pred             ----------------CCCchhhhhhhhhHHHHHHHHHHHhcccC--eEEEEEeeCCCCCcchhccCCcHHHHHHHHHHH
Confidence                            67788999999999999999999999998  999999999999998775421          11


Q ss_pred             HHHHHHHHHhhcCChHHHHHHHHHHHhcCccccCCceeeccCcccc
Q 019722          254 TDLVFFLTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAW  299 (336)
Q Consensus       254 ~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  299 (336)
                      .......+..+..+|+|+|.+++||++.+.++|+||+.+.+||+..
T Consensus       217 ~~~~~~~Pl~R~g~pedvA~~v~fL~S~~~s~~itG~~i~vDGG~s  262 (264)
T d1spxa_         217 ATMKECVPAGVMGQPQDIAEVIAFLADRKTSSYIIGHQLVVDGGSS  262 (264)
T ss_dssp             HHHHHHCTTSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGG
T ss_pred             HHHHhcCCCCCCcCHHHHHHHHHHHhCCcccCCccCceEEeCCChh
Confidence            1222344556788999999999999986678999999999999854

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=1e-47  Score=338.18  Aligned_cols=236  Identities=22%  Similarity=0.211  Sum_probs=204.5

Q ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhc
Q 019722           32 NLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSL  111 (336)
Q Consensus        32 ~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  111 (336)
                      -|+||+||||||++|||+++|++|+++|++|++++|+++..+ ..+++       ...+++||++++++++++++++.+.
T Consensus         2 ~l~GK~alITGas~GIG~aia~~la~~G~~V~~~~~~~~~~~-~~~~~-------~~~~~~~Dv~~~~~v~~~~~~~~~~   73 (248)
T d2d1ya1           2 LFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKE-VAEAI-------GGAFFQVDLEDERERVRFVEEAAYA   73 (248)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHHH-HHHHH-------TCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHHc-------CCeEEEEeCCCHHHHHHHHHHHHHh
Confidence            479999999999999999999999999999999999987543 33332       3467899999999999999999999


Q ss_pred             CCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcccc
Q 019722          112 NLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRY  189 (336)
Q Consensus       112 ~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~  189 (336)
                      +|+||+||||||+....  .+.+.++|++++++|+.|+|+++|+++|+|++++     .|+||+++|..+..+       
T Consensus        74 ~G~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~-----~G~Ii~isS~~~~~~-------  141 (248)
T d2d1ya1          74 LGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVG-----GGAIVNVASVQGLFA-------  141 (248)
T ss_dssp             HSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTT-----CEEEEEECCGGGTSB-------
T ss_pred             cCCCCeEEEeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhcccccccc-----ccccccccccccccc-------
Confidence            99999999999976553  7789999999999999999999999999999876     589999999998877       


Q ss_pred             cccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccc-------hhHHHHHHHHHH
Q 019722          190 LGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRERE-------GFITDLVFFLTS  262 (336)
Q Consensus       190 ~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~-------~~~~~~~~~~~~  262 (336)
                                .+....|+++|+++++|++++++|+++.|  ||||+|+||+++|++.+...       ..........+.
T Consensus       142 ----------~~~~~~Y~asKaal~~ltk~lA~el~~~g--IrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~pl  209 (248)
T d2d1ya1         142 ----------EQENAAYNASKGGLVNLTRSLALDLAPLR--IRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHAL  209 (248)
T ss_dssp             ----------CTTBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCHHHHHHHC--------CHHHHTTSTT
T ss_pred             ----------ccccchhHHHHHHHHHHHHHHHHHhhhhC--cEEEEEeeCCCCCchHHHHhhcCCCHHHHHHHHHhcCCC
Confidence                      77888999999999999999999999988  99999999999999875431       111222233445


Q ss_pred             hhcCChHHHHHHHHHHHhcCccccCCceeeccCccccc
Q 019722          263 KLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWT  300 (336)
Q Consensus       263 ~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~  300 (336)
                      .+..+|+|++..++||++ +.++|+||+.+.+||+...
T Consensus       210 ~R~~~pedia~~v~fL~S-~~s~~itG~~i~vDGG~ta  246 (248)
T d2d1ya1         210 RRLGKPEEVAEAVLFLAS-EKASFITGAILPVDGGMTA  246 (248)
T ss_dssp             SSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTGGG
T ss_pred             CCCcCHHHHHHHHHHHhC-chhcCCCCcEEEcCcCccc
Confidence            667899999999999987 8889999999999998643

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=100.00  E-value=4.2e-48  Score=341.70  Aligned_cols=239  Identities=22%  Similarity=0.233  Sum_probs=208.3

Q ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhc
Q 019722           32 NLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSL  111 (336)
Q Consensus        32 ~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  111 (336)
                      .|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++     +.+..++++|++++++++++++++.+.
T Consensus         3 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~~~~~~~~~~~~   77 (253)
T d1hxha_           3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL-----GERSMFVRHDVSSEADWTLVMAAVQRR   77 (253)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH-----CTTEEEECCCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-----CCCeEEEEeecCCHHHHHHHHHHHHHH
Confidence            589999999999999999999999999999999999999988888776     568899999999999999999999999


Q ss_pred             CCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcccc
Q 019722          112 NLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRY  189 (336)
Q Consensus       112 ~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~  189 (336)
                      ++++|+||||||+....  .+.+.++|++++++|+.++|+++|+++|+|+++      +|+||++||.++..+       
T Consensus        78 ~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~------~G~Iv~isS~~~~~~-------  144 (253)
T d1hxha_          78 LGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKET------GGSIINMASVSSWLP-------  144 (253)
T ss_dssp             HCSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT------CEEEEEECCGGGTSC-------
T ss_pred             hCCCCeEEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhc------CCceecccchhhhcC-------
Confidence            99999999999976553  678899999999999999999999999999754      489999999988876       


Q ss_pred             cccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccc--hhHHHHHHH----HHHh
Q 019722          190 LGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRERE--GFITDLVFF----LTSK  263 (336)
Q Consensus       190 ~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~--~~~~~~~~~----~~~~  263 (336)
                                .+...+|++||+++.+|+|++++|+++.|.+||||+|+||+|+|++.+...  ...++....    .+..
T Consensus       145 ----------~~~~~~Y~asKaal~~lt~~lA~e~~~~g~~IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~g  214 (253)
T d1hxha_         145 ----------IEQYAGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKGVSKEMVLHDPKLNRAG  214 (253)
T ss_dssp             ----------CTTBHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCTTCCHHHHBCBTTTBTTC
T ss_pred             ----------ccccccccchhHHHHHHHHHHHHHHhhcCCCEEEEEEeECCCcCHhHHhhCcchhhHHHHHhCccccccC
Confidence                      777889999999999999999999998666699999999999999865431  111111111    1123


Q ss_pred             hcCChHHHHHHHHHHHhcCccccCCceeeccCcccc
Q 019722          264 LLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAW  299 (336)
Q Consensus       264 ~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  299 (336)
                      +..+|+|+|..++||++ +.++|+||+.+.+||+..
T Consensus       215 r~~~pedvA~~v~fL~S-~~s~~itG~~i~VDGG~~  249 (253)
T d1hxha_         215 RAYMPERIAQLVLFLAS-DESSVMSGSELHADNSIL  249 (253)
T ss_dssp             CEECHHHHHHHHHHHHS-GGGTTCCSCEEEESSSCT
T ss_pred             CCCCHHHHHHHHHHHhC-hhhCCCcCcEEEECccHh
Confidence            56689999999999997 888999999999999853

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=6.2e-47  Score=332.05  Aligned_cols=235  Identities=23%  Similarity=0.307  Sum_probs=205.2

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHh
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHS  110 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  110 (336)
                      |||+||++|||||++|||+++|++|+++|++|++++|++++++++.+++      ..+.++.+|+++++++++++    +
T Consensus         1 mdl~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~------~~~~~~~~Dv~~~~~v~~~~----~   70 (242)
T d1cyda_           1 LNFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKEC------PGIEPVCVDLGDWDATEKAL----G   70 (242)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS------TTCEEEECCTTCHHHHHHHH----T
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc------CCCeEEEEeCCCHHHHHHHH----H
Confidence            6899999999999999999999999999999999999998887766653      35788999999999887665    4


Q ss_pred             cCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccc
Q 019722          111 LNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIR  188 (336)
Q Consensus       111 ~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~  188 (336)
                      ++|+||+||||||+....  .+.+.++|++.+++|+.++++++|++.|.|.++..    +|+||+++|..+..+      
T Consensus        71 ~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~----~g~ii~isS~~~~~~------  140 (242)
T d1cyda_          71 GIGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGV----PGSIVNVSSMVAHVT------  140 (242)
T ss_dssp             TCCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC----CEEEEEECCGGGTSC------
T ss_pred             HcCCCeEEEECCccccchhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcc----cCcccccchhhcccc------
Confidence            579999999999976543  77899999999999999999999999998766532    589999999987776      


Q ss_pred             ccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccc---hhHHHHHHHHHHhhc
Q 019722          189 YLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRERE---GFITDLVFFLTSKLL  265 (336)
Q Consensus       189 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~---~~~~~~~~~~~~~~~  265 (336)
                                 .+....|+++|+++.+|+|+++.|+++.|  ||||+|+||+++|+|.+...   +.........+..+.
T Consensus       141 -----------~~~~~~Y~asKaal~~lt~~lA~e~~~~g--IrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl~R~  207 (242)
T d1cyda_         141 -----------FPNLITYSSTKGAMTMLTKAMAMELGPHK--IRVNSVNPTVVLTDMGKKVSADPEFARKLKERHPLRKF  207 (242)
T ss_dssp             -----------CTTBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCBTTHHHHHHTCCHHHHHHHHHHSTTSSC
T ss_pred             -----------CCccccccchHHHHHHHHHHHHHHhCccC--eecccCCCCCccCHHHHhhcCCHHHHHHHHhcCCCCCC
Confidence                       77888999999999999999999999998  99999999999999876643   334445556667788


Q ss_pred             CChHHHHHHHHHHHhcCccccCCceeeccCcccc
Q 019722          266 KTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAW  299 (336)
Q Consensus       266 ~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  299 (336)
                      .+|+|++..++||++ +.++|+||+.+.+||+..
T Consensus       208 ~~peeva~~v~fL~S-~~s~~itG~~i~vDGG~~  240 (242)
T d1cyda_         208 AEVEDVVNSILFLLS-DRSASTSGGGILVDAGYL  240 (242)
T ss_dssp             BCHHHHHHHHHHHHS-GGGTTCCSSEEEESTTGG
T ss_pred             cCHHHHHHHHHHHhC-chhcCcCCceEEeCcchh
Confidence            999999999999987 889999999999999754

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.3e-46  Score=339.36  Aligned_cols=263  Identities=20%  Similarity=0.286  Sum_probs=223.7

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCC---CCceEEEeccCCCHHHHHHHHHH
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCP---GSDIVVLPLDLSSLSSVRNFVSQ  107 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~  107 (336)
                      ..|+||+||||||++|||+++|++|+++|++|++++|+.+++++..+++++..+   +.++.+++||+++++++++++++
T Consensus         8 g~L~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~   87 (297)
T d1yxma1           8 GLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKS   87 (297)
T ss_dssp             TTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHH
Confidence            459999999999999999999999999999999999999999999999886532   56899999999999999999999


Q ss_pred             HHhcCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCC
Q 019722          108 FHSLNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGD  185 (336)
Q Consensus       108 ~~~~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~  185 (336)
                      +.+.+|++|+||||||.....  .+.+.++|++.+++|+.|+|+++|+++|.|.+++     .++||++||.. ...   
T Consensus        88 ~~~~~G~iDiLVnnAg~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~-----~g~Ii~~ss~~-~~~---  158 (297)
T d1yxma1          88 TLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEH-----GGSIVNIIVPT-KAG---  158 (297)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHH-----CEEEEEECCCC-TTC---
T ss_pred             HHHHhCCeEEEEeeccccccCchhhhhhhhhhhhhcccccchhhHHHHHHHhhcccc-----ccccccccccc-ccc---
Confidence            999999999999999976543  6788999999999999999999999999999887     58999887643 333   


Q ss_pred             cccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccch-----hHHHHHHHH
Q 019722          186 MIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREG-----FITDLVFFL  260 (336)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~-----~~~~~~~~~  260 (336)
                                    .+....|+++|+|+++|+|++|.|+++.|  ||||+|+||+|+|++..+...     .........
T Consensus       159 --------------~~~~~~Y~asKaal~~ltk~lA~el~~~g--IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~  222 (297)
T d1yxma1         159 --------------FPLAVHSGAARAGVYNLTKSLALEWACSG--IRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKI  222 (297)
T ss_dssp             --------------CTTCHHHHHHHHHHHHHHHHHHHHTGGGT--EEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGGS
T ss_pred             --------------ccccccchhHHHHHHHHHHHHHHHhcccC--ceEEEeeeCcCcCcchhhhccccCHHHHHHHHhcC
Confidence                          66778999999999999999999999988  999999999999998765422     222333345


Q ss_pred             HHhhcCChHHHHHHHHHHHhcCccccCCceeeccCcccccc-------------cCCCCHHHHHHHHHHHHH
Q 019722          261 TSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWTS-------------KLGSNSNEASRLWAASEL  319 (336)
Q Consensus       261 ~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~~-------------~~~~~~~~~~~~w~~~~~  319 (336)
                      +..+..+|+|+|..++||++ +.++|+||+.+.+||+....             ....+.+..+++|+..++
T Consensus       223 plgR~g~pedvA~~v~fL~S-d~s~~iTG~~i~VDGG~sl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  293 (297)
T d1yxma1         223 PAKRIGVPEEVSSVVCFLLS-PAASFITGQSVDVDGGRSLYTHSYEVPDHDNWPKGAGDLSVVKKMKETFKE  293 (297)
T ss_dssp             TTSSCBCTHHHHHHHHHHHS-GGGTTCCSCEEEESTTGGGCBTTCCCCCCSCCCCCSSCCHHHHHHHHHHHH
T ss_pred             CCCCCcCHHHHHHHHHHHhC-chhcCcCCcEEEeCcChhhhcCCCCCCCcccccccCCchHHHHHHhHhhHH
Confidence            56778899999999999997 88899999999999985432             112245677778876554

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=100.00  E-value=5.3e-47  Score=336.35  Aligned_cols=250  Identities=20%  Similarity=0.215  Sum_probs=214.3

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHh
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHS  110 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  110 (336)
                      ++|+||+||||||++|||+++|++|+++|++|++++|+.+++.+..+++.+.. +.++.+++||++++++++++++++.+
T Consensus         5 m~l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~-g~~~~~~~~Dv~~~~~v~~~~~~~~~   83 (260)
T d1h5qa_           5 ISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEF-GVKTKAYQCDVSNTDIVTKTIQQIDA   83 (260)
T ss_dssp             ECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHH-TCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHh-CCceEEEEccCCCHHHHHHHHHHHHH
Confidence            58999999999999999999999999999999999999999988888886654 56899999999999999999999999


Q ss_pred             cCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccc
Q 019722          111 LNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIR  188 (336)
Q Consensus       111 ~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~  188 (336)
                      .++++|+||||||+....  .+.+.++|++.+++|+.|++.++|++.|+|.++..    .++|++++|..........  
T Consensus        84 ~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~----~g~i~~~~s~~~~~~~~~~--  157 (260)
T d1h5qa_          84 DLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQ----KGSIVVTSSMSSQIINQSS--  157 (260)
T ss_dssp             HSCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC----CEEEEEECCGGGTSCCEEE--
T ss_pred             HhCCCcEecccccccccCCHHHhccccccccccccccchhhhhhhhccccccccc----ceEEEEeeccccccccccc--
Confidence            999999999999976553  67899999999999999999999999999976543    5778887776554321100  


Q ss_pred             ccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhH-HHHHHHHHHhhcCC
Q 019722          189 YLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFI-TDLVFFLTSKLLKT  267 (336)
Q Consensus       189 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~-~~~~~~~~~~~~~~  267 (336)
                              ....++...|+++|+++.+|+|+++.|+++.|  ||||+|+||+++|++........ .......+..+..+
T Consensus       158 --------~~~~~~~~~Y~asKaal~~lt~~lA~el~~~g--IrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~pl~R~g~  227 (260)
T d1h5qa_         158 --------LNGSLTQVFYNSSKAACSNLVKGLAAEWASAG--IRVNALSPGYVNTDQTAHMDKKIRDHQASNIPLNRFAQ  227 (260)
T ss_dssp             --------TTEECSCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCGGGGGSCHHHHHHHHHTCTTSSCBC
T ss_pred             --------cccCccccchhhhhhhHHHHHHHHHHHhchhC--eEEeecCCCcccCcchhccCHHHHHHHHhcCCCCCCcC
Confidence                    00135667899999999999999999999998  99999999999999988765433 33444556677889


Q ss_pred             hHHHHHHHHHHHhcCccccCCceeeccCccc
Q 019722          268 IPQGAATTCYVAIHPRLVNVSGKYFADCNEA  298 (336)
Q Consensus       268 ~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  298 (336)
                      |+|+|..++||++ +.++|+||+.+.+||+.
T Consensus       228 pedvA~~v~fL~S-~~s~~itG~~i~VDGG~  257 (260)
T d1h5qa_         228 PEEMTGQAILLLS-DHATYMTGGEYFIDGGQ  257 (260)
T ss_dssp             GGGGHHHHHHHHS-GGGTTCCSCEEEECTTG
T ss_pred             HHHHHHHHHHHhc-chhCCCcCceEEECCCe
Confidence            9999999999987 88899999999999975

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=2.1e-47  Score=341.05  Aligned_cols=245  Identities=22%  Similarity=0.233  Sum_probs=208.7

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhC-CCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDC-PGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      |.|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++++.. .+.++.+++||++++++++++++++.
T Consensus         1 prL~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~   80 (272)
T d1xkqa_           1 PRFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTL   80 (272)
T ss_dssp             CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHH
Confidence            57999999999999999999999999999999999999999999999998753 34579999999999999999999999


Q ss_pred             hcCCCccEEEEcccCCCCC------CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCc-cccc
Q 019722          110 SLNLPLNLLINNAGKFAHQ------HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSI-HSWF  182 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~~~------~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~-~~~~  182 (336)
                      +.+|+||+||||||.....      .+.+.+.|++++++|+.+++.++|+++|+|++++      |++|+++|.. +..+
T Consensus        81 ~~~g~iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~~------g~iI~~~Ss~a~~~~  154 (272)
T d1xkqa_          81 KQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK------GEIVNVSSIVAGPQA  154 (272)
T ss_dssp             HHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT------CEEEEECCGGGSSSC
T ss_pred             HHhCCceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhcccccccC------CccccccchhccccC
Confidence            9999999999999976542      3456668999999999999999999999998764      6777777754 4544


Q ss_pred             cCCcccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchh--HHH-HH--
Q 019722          183 SGDMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGF--ITD-LV--  257 (336)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~--~~~-~~--  257 (336)
                                       .++...|++||+|+.+|+|+|+.|+++.|  ||||+|+||+|+|+|.......  ... ..  
T Consensus       155 -----------------~~~~~~Y~asKaal~~ltk~lA~el~~~g--IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~  215 (272)
T d1xkqa_         155 -----------------QPDFLYYAIAKAALDQYTRSTAIDLAKFG--IRVNSVSPGMVETGFTNAMGMPDQASQKFYNF  215 (272)
T ss_dssp             -----------------CCSSHHHHHHHHHHHHHHHHHHHHHHTTT--CEEEEEEECCBCSSHHHHTTCCHHHHHHHHHH
T ss_pred             -----------------CCCcchhhhHHHHHHHHHHHHHHHhcccC--eEEEEEeeCCCcchhhhccCCchHHHHHHHHH
Confidence                             67788999999999999999999999988  9999999999999987654211  111 11  


Q ss_pred             -----HHHHHhhcCChHHHHHHHHHHHhcCccccCCceeeccCccccc
Q 019722          258 -----FFLTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWT  300 (336)
Q Consensus       258 -----~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~  300 (336)
                           ...+..+..+|+|+|..++||++.+.+.|+||+.+.+||+...
T Consensus       216 ~~~~~~~~PlgR~g~pediA~~v~fL~S~~as~~iTG~~i~vDGG~~l  263 (272)
T d1xkqa_         216 MASHKECIPIGAAGKPEHIANIILFLADRNLSFYILGQSIVADGGTSL  263 (272)
T ss_dssp             HHHCTTTCTTSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGG
T ss_pred             HHHHhcCCCCCCCcCHHHHHHHHHHHhCcchhCCccCeEEEeCcCHHH
Confidence                 1123456789999999999999844567999999999998654

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=1.6e-47  Score=342.15  Aligned_cols=246  Identities=22%  Similarity=0.206  Sum_probs=210.7

Q ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhC-CCCceEEEeccCCCHHHHHHHHHHHHh
Q 019722           32 NLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDC-PGSDIVVLPLDLSSLSSVRNFVSQFHS  110 (336)
Q Consensus        32 ~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~~Dl~~~~~v~~~~~~~~~  110 (336)
                      .|+||++|||||++|||+++|++|+++|++|++++|+.++++++.+++.+.. +..++.++++|++++++++++++++.+
T Consensus         1 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   80 (274)
T d1xhla_           1 RFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLA   80 (274)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHH
Confidence            4799999999999999999999999999999999999999999999998763 235799999999999999999999999


Q ss_pred             cCCCccEEEEcccCCCCC----CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCc
Q 019722          111 LNLPLNLLINNAGKFAHQ----HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDM  186 (336)
Q Consensus       111 ~~~~id~lv~nAg~~~~~----~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~  186 (336)
                      .+|+||++|||||.....    .+.+.++|++.+++|+.++|.++|+++|.|++++     +++|+++||.++..+    
T Consensus        81 ~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-----~g~ii~~ss~~~~~~----  151 (274)
T d1xhla_          81 KFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK-----GEIVNVSSIVAGPQA----  151 (274)
T ss_dssp             HHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-----CEEEEECCGGGSSSC----
T ss_pred             HcCCceEEEeecccccccccccccCCHHHHHHHHhhcccccccccccccccccccc-----cccccchhhhhcccc----
Confidence            999999999999965432    3457789999999999999999999999998875     578887777766655    


Q ss_pred             ccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccch--hHHHHHH------
Q 019722          187 IRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREG--FITDLVF------  258 (336)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~--~~~~~~~------  258 (336)
                                   .+++..|+++|+++.+|+|+++.|+++.|  ||||+|+||+|+|++......  ...+...      
T Consensus       152 -------------~~~~~~Y~asKaal~~ltk~lA~ela~~g--IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~  216 (274)
T d1xhla_         152 -------------HSGYPYYACAKAALDQYTRCTAIDLIQHG--VRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSR  216 (274)
T ss_dssp             -------------CTTSHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHC
T ss_pred             -------------CCCCceehhhhhHHHHHHHHHHHHHhHhC--CceeeeccCCCcCchhhhhcccchhhHHHHHHHHHH
Confidence                         67788999999999999999999999998  999999999999998765421  1111111      


Q ss_pred             --HHHHhhcCChHHHHHHHHHHHhcCccccCCceeeccCcccccc
Q 019722          259 --FLTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWTS  301 (336)
Q Consensus       259 --~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~~  301 (336)
                        ..+..+..+|+|+|..++||++.+.++|+||+.+.+||+....
T Consensus       217 ~~~iPlgR~g~pediA~~v~fL~S~d~s~~itG~~i~vDGG~~l~  261 (274)
T d1xhla_         217 KECIPVGHCGKPEEIANIIVFLADRNLSSYIIGQSIVADGGSTLV  261 (274)
T ss_dssp             TTTCTTSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGGC
T ss_pred             HcCCCCCCCcCHHHHHHHHHHHcCCccccCccCcEEEeCcCHHHh
Confidence              1245567899999999999997556899999999999986544

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=100.00  E-value=1e-46  Score=337.15  Aligned_cols=253  Identities=19%  Similarity=0.187  Sum_probs=212.3

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHh
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHS  110 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  110 (336)
                      |+|+||+||||||++|||+++|++|+++|++|++++|++++++++.+++     +.++.++++|++++++++++++++.+
T Consensus         1 M~L~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~-----~~~~~~~~~Dv~~~~~~~~~~~~~~~   75 (276)
T d1bdba_           1 MKLKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDH-----GDNVLGIVGDVRSLEDQKQAASRCVA   75 (276)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----GGGEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc-----CCCeeEEecccccHHHHHHHHHHHHH
Confidence            6799999999999999999999999999999999999999888776665     46899999999999999999999999


Q ss_pred             cCCCccEEEEcccCCCCC-------CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCcccccc
Q 019722          111 LNLPLNLLINNAGKFAHQ-------HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFS  183 (336)
Q Consensus       111 ~~~~id~lv~nAg~~~~~-------~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~  183 (336)
                      .++++|++|||||+....       .+.+.+.|++++++|+.|++.++|+++|.|++++      |+||+++|..+..+ 
T Consensus        76 ~~g~idilvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~------g~iI~i~S~~~~~~-  148 (276)
T d1bdba_          76 RFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVASR------GNVIFTISNAGFYP-  148 (276)
T ss_dssp             HHSCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT------CEEEEECCGGGTST-
T ss_pred             HhCCcccccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhcC------CCceeeeechhccC-
Confidence            999999999999976432       2233456999999999999999999999998764      89999999888776 


Q ss_pred             CCcccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccch-----------h
Q 019722          184 GDMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREG-----------F  252 (336)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~-----------~  252 (336)
                                      .+....|++||+++.+|+|+++.|+++ +  ||||+|+||+|+|+|......           .
T Consensus       149 ----------------~~~~~~Y~asKaal~~ltr~lA~ela~-~--IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~  209 (276)
T d1bdba_         149 ----------------NGGGPLYTAAKHAIVGLVRELAFELAP-Y--VRVNGVGSGGINSDLRGPSSLGMGSKAISTVPL  209 (276)
T ss_dssp             ----------------TSSCHHHHHHHHHHHHHHHHHHHHHTT-T--CEEEEEEECCCCSCCCCCGGGC---------CH
T ss_pred             ----------------CCCCchHHHHHHHHHHHHHHHHHHhhc-c--eEEcccCCCCEecCcCCccchhhhhhccCcHHH
Confidence                            677889999999999999999999985 4  999999999999998765421           1


Q ss_pred             HHHHHHHHHHhhcCChHHHHHHHHHHHhcCccccCCceeeccCccccccc---CCCCHHHHHHHH
Q 019722          253 ITDLVFFLTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWTSK---LGSNSNEASRLW  314 (336)
Q Consensus       253 ~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~~~---~~~~~~~~~~~w  314 (336)
                      ........+..+...|+|+|.+++||++.+.++|+||+.+.+||+.....   .....++.+++|
T Consensus       210 ~~~~~~~~PlgR~g~peeva~~v~fL~S~~~a~~itG~~i~VDGG~~~~g~~~~~~~~~~~~~~~  274 (276)
T d1bdba_         210 ADMLKSVLPIGRMPEVEEYTGAYVFFATRGDAAPATGALLNYDGGLGVRGFFSGAGGNDLLEQLN  274 (276)
T ss_dssp             HHHHTTTCTTSSCCCGGGGSHHHHHHHCHHHHTTCSSCEEEESSSGGGCCSSCSCSCTTHHHHHT
T ss_pred             HHHHHhcCCCCCCcCHHHHHHHHHHHcCCcccCCeeCcEEEECcChhhcceeCCCCCcchHHHhc
Confidence            12222334556788999999999999986678999999999999866532   233345555554

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.6e-46  Score=327.62  Aligned_cols=235  Identities=21%  Similarity=0.266  Sum_probs=203.4

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHh
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHS  110 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  110 (336)
                      +.|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++      ..+..+++|++|++++++++    +
T Consensus         3 ~~L~GK~~lITGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~~------~~~~~~~~Dv~d~~~v~~~~----~   72 (244)
T d1pr9a_           3 LFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVREC------PGIEPVCVDLGDWEATERAL----G   72 (244)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS------TTCEEEECCTTCHHHHHHHH----T
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHhc------CCCeEEEEeCCCHHHHHHHH----H
Confidence            3589999999999999999999999999999999999998888776653      35788999999999987665    4


Q ss_pred             cCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccc
Q 019722          111 LNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIR  188 (336)
Q Consensus       111 ~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~  188 (336)
                      .+++||+||||||.....  .+.+.++|++.+++|+.+++.++|+++|.|.++..    .|+||++||.++..+      
T Consensus        73 ~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~----~g~Ii~isS~~~~~~------  142 (244)
T d1pr9a_          73 SVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGV----PGAIVNVSSQCSQRA------  142 (244)
T ss_dssp             TCCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC----CEEEEEECCGGGTSC------
T ss_pred             HhCCceEEEeccccccccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCC----cceEeeccccccccc------
Confidence            579999999999986654  67889999999999999999999999998765432    589999999988776      


Q ss_pred             ccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccch---hHHHHHHHHHHhhc
Q 019722          189 YLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREG---FITDLVFFLTSKLL  265 (336)
Q Consensus       189 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~---~~~~~~~~~~~~~~  265 (336)
                                 .+....|++||+++++|+|+++.|+++.|  ||||+|+||+|+|++.+....   .........+..+.
T Consensus       143 -----------~~~~~~Y~asKaal~~lt~~lA~el~~~g--IrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~pl~R~  209 (244)
T d1pr9a_         143 -----------VTNHSVYCSTKGALDMLTKVMALELGPHK--IRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRIPLGKF  209 (244)
T ss_dssp             -----------CTTBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCBCSHHHHTTSCSHHHHHHHHTTCTTCSC
T ss_pred             -----------ccchhhhhhhHHHHHHHHHHHHHHhCCCc--EEEEEEeeCcCcChHHhhhccChHHHHHHHhcCCCCCC
Confidence                       77788999999999999999999999988  999999999999999776532   22233334456678


Q ss_pred             CChHHHHHHHHHHHhcCccccCCceeeccCcccc
Q 019722          266 KTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAW  299 (336)
Q Consensus       266 ~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  299 (336)
                      .+|+|+|..++||++ +.++|+||+.+.+||+..
T Consensus       210 ~~peevA~~v~fL~S-~~a~~itG~~i~vDGG~~  242 (244)
T d1pr9a_         210 AEVEHVVNAILFLLS-DRSGMTTGSTLPVEGGFW  242 (244)
T ss_dssp             BCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTGG
T ss_pred             cCHHHHHHHHHHHhC-chhCCcCCcEEEECccHh
Confidence            899999999999987 889999999999999864

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.5e-45  Score=326.08  Aligned_cols=249  Identities=24%  Similarity=0.261  Sum_probs=213.3

Q ss_pred             CCCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHH
Q 019722           29 GCPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQF  108 (336)
Q Consensus        29 ~~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~  108 (336)
                      ||-+|+||+||||||++|||+++|+.|+++|++|++++|++++++++.+++++..++.++.+++||++++++++++++++
T Consensus         4 ~M~~lk~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~   83 (257)
T d1xg5a_           4 GMERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAI   83 (257)
T ss_dssp             TCGGGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHH
Confidence            46669999999999999999999999999999999999999999999999998876679999999999999999999999


Q ss_pred             HhcCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCc
Q 019722          109 HSLNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDM  186 (336)
Q Consensus       109 ~~~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~  186 (336)
                      .+.+++||+||||||.....  .+.+.++|++.+++|+.++|+++++++|.|++...   .+|+||++||.++....+  
T Consensus        84 ~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~---~~g~Ii~isS~~~~~~~p--  158 (257)
T d1xg5a_          84 RSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNV---DDGHIININSMSGHRVLP--  158 (257)
T ss_dssp             HHHHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTC---CSCEEEEECCGGGTSCCS--
T ss_pred             HHhcCCCCEEEecccccCCCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhcc---CCCceEEEechHhcCCCC--
Confidence            99999999999999976553  67899999999999999999999999999987541   258999999988765321  


Q ss_pred             ccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccch-hHHHHHHHHHHhhc
Q 019722          187 IRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREG-FITDLVFFLTSKLL  265 (336)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~-~~~~~~~~~~~~~~  265 (336)
                                   ......|+++|+++.+|+|+|+.|+...+.+||||+|+||.++|++.....+ .........+..+.
T Consensus       159 -------------~~~~~~Y~~sKaal~~ltr~la~el~~~~~~I~vn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~r~  225 (257)
T d1xg5a_         159 -------------LSVTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDKDPEKAAATYEQMKC  225 (257)
T ss_dssp             -------------CGGGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTTTCHHHHHHHHC---C
T ss_pred             -------------CcccHHHHHHHHHHHhCHHHHHHHHHhCCCCEEEEEEeCCCCCChhhhhcChhhHHHHHhcCCCCCC
Confidence                         4567789999999999999999999433334999999999999998776543 33445556777888


Q ss_pred             CChHHHHHHHHHHHhcCccccCCcee-eccCc
Q 019722          266 KTIPQGAATTCYVAIHPRLVNVSGKY-FADCN  296 (336)
Q Consensus       266 ~~~~~~a~~~~~l~~~~~~~~~~G~~-~~~~~  296 (336)
                      .+|+|+|.+++||++ +.++++||+. +..+|
T Consensus       226 ~~pedvA~~v~fL~s-~~a~~itG~i~i~~~g  256 (257)
T d1xg5a_         226 LKPEDVAEAVIYVLS-TPAHIQIGDIQMRPTG  256 (257)
T ss_dssp             BCHHHHHHHHHHHHH-SCTTEEEEEEEEEETT
T ss_pred             cCHHHHHHHHHHHhC-ChhcCeECCEEEEeCC
Confidence            999999999999998 6678999985 55544

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.6e-45  Score=325.68  Aligned_cols=237  Identities=24%  Similarity=0.249  Sum_probs=209.9

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcC
Q 019722           33 LSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLN  112 (336)
Q Consensus        33 l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  112 (336)
                      ..||+||||||++|||+++|++|+++|++|++++|+.+++++..+++.+..++.++.+++||++++++++++++++.+.+
T Consensus         1 i~GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   80 (254)
T d2gdza1           1 VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHF   80 (254)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHHc
Confidence            47999999999999999999999999999999999999999999999887777899999999999999999999999999


Q ss_pred             CCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccccccc
Q 019722          113 LPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQ  192 (336)
Q Consensus       113 ~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~~  192 (336)
                      |+||+||||||+.      ..++|++++++|+.+++.++++++|+|.++..  +.+|+||++||.++..+          
T Consensus        81 G~iDilVnnAg~~------~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~--~~~g~Iv~isS~~~~~~----------  142 (254)
T d2gdza1          81 GRLDILVNNAGVN------NEKNWEKTLQINLVSVISGTYLGLDYMSKQNG--GEGGIIINMSSLAGLMP----------  142 (254)
T ss_dssp             SCCCEEEECCCCC------CSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGT--CCCEEEEEECCGGGTSC----------
T ss_pred             CCcCeeccccccc------ccccchheeeeehhhHHHHHHHHHHHHHHhhc--CCCcEEEeeccHhhccC----------
Confidence            9999999999985      34679999999999999999999999987642  23589999999998876          


Q ss_pred             ccCCCCCCChhhHhHHHHHHHHHHHHH--HHHHHccCCCcEEEEEeeCCceeCCCCCccc---------hhHHHHHHHHH
Q 019722          193 ISRNKSHYDATRAYALSKLANVLHTKE--LAQRLKQMEANVTVNCVHPGIVRTRLTRERE---------GFITDLVFFLT  261 (336)
Q Consensus       193 ~~~~~~~~~~~~~Y~~sK~a~~~l~~~--la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~---------~~~~~~~~~~~  261 (336)
                             .+...+|++||+++.+|+|+  |+.|+++.|  ||||+|+||+|+|+|.+...         ..........+
T Consensus       143 -------~~~~~~Y~asKaal~~ltrs~ala~e~~~~g--IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~p  213 (254)
T d2gdza1         143 -------VAQQPVYCASKHGIVGFTRSAALAANLMNSG--VRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIK  213 (254)
T ss_dssp             -------CTTCHHHHHHHHHHHHHHHHHHHHHHHHTCC--EEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHHHHHHH
T ss_pred             -------CCCccchHHHHHHHHHHHHHHHHHHHhcCCC--EEEEEEEcCCCCChhhhhccccccccccHHHHHHHHhcCC
Confidence                   77788999999999999997  788999988  99999999999999876642         12334445667


Q ss_pred             HhhcCChHHHHHHHHHHHhcCccccCCceeeccCcccc
Q 019722          262 SKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAW  299 (336)
Q Consensus       262 ~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  299 (336)
                      ..+..+|+|+|..++||+++ .  ++||+.+.++|+..
T Consensus       214 ~~r~~~pedvA~~v~fL~s~-~--~itG~~i~VdGG~~  248 (254)
T d2gdza1         214 YYGILDPPLIANGLITLIED-D--ALNGAIMKITTSKG  248 (254)
T ss_dssp             HHCCBCHHHHHHHHHHHHHC-T--TCSSCEEEEETTTE
T ss_pred             CCCCcCHHHHHHHHHHHHcC-C--CCCCCEEEECCCCe
Confidence            77889999999999999984 3  48999999998743

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=100.00  E-value=6.1e-45  Score=318.90  Aligned_cols=226  Identities=23%  Similarity=0.305  Sum_probs=201.0

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCE-------EEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHH
Q 019722           36 VTAIITGATSGIGAETARVLAKRGAR-------LVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQF  108 (336)
Q Consensus        36 k~~lItGgs~gIG~aia~~L~~~G~~-------V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~  108 (336)
                      ++||||||++|||+++|++|+++|++       |++++|+.++++++.+++++.  +.++.+++||++|+++++++++++
T Consensus         2 ~VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~--g~~~~~~~~Dvt~~~~v~~~~~~~   79 (240)
T d2bd0a1           2 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAE--GALTDTITADISDMADVRRLTTHI   79 (240)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTT--TCEEEEEECCTTSHHHHHHHHHHH
T ss_pred             CEEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHH
Confidence            57899999999999999999999997       999999999999999999876  678999999999999999999999


Q ss_pred             HhcCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCc
Q 019722          109 HSLNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDM  186 (336)
Q Consensus       109 ~~~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~  186 (336)
                      .+.+|++|+||||||+....  .+.+.++|++++++|+.|+++++|+++|+|++++     .|+||++||.++..+    
T Consensus        80 ~~~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~-----~G~Ii~isS~~~~~~----  150 (240)
T d2bd0a1          80 VERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQH-----SGHIFFITSVAATKA----  150 (240)
T ss_dssp             HHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-----CEEEEEECCGGGTSC----
T ss_pred             HHHcCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcC-----CCceEEEechhhcCC----
Confidence            99999999999999976654  6788999999999999999999999999999876     589999999998876    


Q ss_pred             ccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHHHHHHHHhhcC
Q 019722          187 IRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSKLLK  266 (336)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~  266 (336)
                                   .+++..|++||+++.+|+++|+.|+++.|  ||||+|+||+|+|+|+.......        ..+..
T Consensus       151 -------------~~~~~~Y~asK~al~~lt~~la~el~~~g--Irvn~i~PG~v~T~~~~~~~~~~--------~~~~~  207 (240)
T d2bd0a1         151 -------------FRHSSIYCMSKFGQRGLVETMRLYARKCN--VRITDVQPGAVYTPMWGKVDDEM--------QALMM  207 (240)
T ss_dssp             -------------CTTCHHHHHHHHHHHHHHHHHHHHHTTTT--EEEEEEEECCBCSTTTCCCCSTT--------GGGSB
T ss_pred             -------------CCCChHHHHHHHHHHHHHHHHHHHhCcCC--eEEEEeeeCcccCchhhhcCHhh--------HhcCC
Confidence                         77888999999999999999999999988  99999999999999988764332        23567


Q ss_pred             ChHHHHHHHHHHHhcCccccCCce-eeccCc
Q 019722          267 TIPQGAATTCYVAIHPRLVNVSGK-YFADCN  296 (336)
Q Consensus       267 ~~~~~a~~~~~l~~~~~~~~~~G~-~~~~~~  296 (336)
                      .|+|+|..++|+++.+. .+++|+ .+..++
T Consensus       208 ~PedvA~~v~~l~s~~~-~~~~~~~~i~p~~  237 (240)
T d2bd0a1         208 MPEDIAAPVVQAYLQPS-RTVVEEIILRPTS  237 (240)
T ss_dssp             CHHHHHHHHHHHHTSCT-TEEEEEEEEEETT
T ss_pred             CHHHHHHHHHHHHcCCc-cCccCCEEEEecC
Confidence            89999999999998554 555554 444443

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=100.00  E-value=2e-45  Score=322.29  Aligned_cols=235  Identities=23%  Similarity=0.194  Sum_probs=203.1

Q ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhc
Q 019722           32 NLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSL  111 (336)
Q Consensus        32 ~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  111 (336)
                      .|+||+||||||++|||+++|++|+++|++|++++|+.+++++..+++     +.++.++++|++++++++++++++.+.
T Consensus         2 ~l~gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dls~~~~i~~~~~~i~~~   76 (241)
T d2a4ka1           2 RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAAL-----EAEAIAVVADVSDPKAVEAVFAEALEE   76 (241)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTC-----CSSEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc-----CCceEEEEecCCCHHHHHHHHHHHHHH
Confidence            589999999999999999999999999999999999998877665544     568999999999999999999999999


Q ss_pred             CCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcccc
Q 019722          112 NLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRY  189 (336)
Q Consensus       112 ~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~  189 (336)
                      ++++|+||||||.....  .+.+.++|++++++|+.+++.++|+++|+|.+.       +.|+++||.+.. .       
T Consensus        77 ~g~iDiLinnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~-------~~i~~~ss~a~~-~-------  141 (241)
T d2a4ka1          77 FGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEG-------GSLVLTGSVAGL-G-------  141 (241)
T ss_dssp             HSCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTT-------CEEEEECCCTTC-C-------
T ss_pred             hCCccEeccccccccccchhhhhccccccccccccccccccccccccccccc-------cceeeccccccc-c-------
Confidence            99999999999976554  688999999999999999999999999988653       567666665433 2       


Q ss_pred             cccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccch-hHHHHHHHHHHhhcCCh
Q 019722          190 LGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREG-FITDLVFFLTSKLLKTI  268 (336)
Q Consensus       190 ~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~-~~~~~~~~~~~~~~~~~  268 (336)
                                .+++..|+++|+|+++|+|+|++|++++|  ||||+|+||+++|++.+.... ...+.....+..+...|
T Consensus       142 ----------~~~~~~Y~~sK~al~~lt~~lA~el~~~g--IrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~p~~r~~~p  209 (241)
T d2a4ka1         142 ----------AFGLAHYAAGKLGVVGLARTLALELARKG--VRVNVLLPGLIQTPMTAGLPPWAWEQEVGASPLGRAGRP  209 (241)
T ss_dssp             ----------HHHHHHHHHCSSHHHHHHHHHHHHHTTTT--CEEEEEEECSBCCGGGTTSCHHHHHHHHHTSTTCSCBCH
T ss_pred             ----------ccCccccchhhHHHHHHHHHHHHHHhHhC--CEEeeeccCcCCCHHHHhhhHhHHHHHHhCCCCCCCcCH
Confidence                      56788999999999999999999999988  999999999999999887643 33444445566778899


Q ss_pred             HHHHHHHHHHHhcCccccCCceeeccCcccc
Q 019722          269 PQGAATTCYVAIHPRLVNVSGKYFADCNEAW  299 (336)
Q Consensus       269 ~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  299 (336)
                      +|+|.+++||++ +.++|+||+.+.+||+..
T Consensus       210 ~dva~~v~fL~S-~~s~~itG~~i~vDGG~s  239 (241)
T d2a4ka1         210 EEVAQAALFLLS-EESAYITGQALYVDGGRS  239 (241)
T ss_dssp             HHHHHHHHHHHS-GGGTTCCSCEEEESTTTT
T ss_pred             HHHHHHHHHHhc-chhCCCcCceEEeCCCcc
Confidence            999999999997 888999999999999854

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=100.00  E-value=7.2e-45  Score=321.01  Aligned_cols=231  Identities=14%  Similarity=0.113  Sum_probs=200.3

Q ss_pred             EEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCCCcc
Q 019722           37 TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLPLN  116 (336)
Q Consensus        37 ~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id  116 (336)
                      |||||||++|||+++|++|+++|++|++++|+.+.++++.... ..       +.++|+++.++++++++++.+.||+||
T Consensus         2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~~~~~~-~~-------~~~~dv~~~~~~~~~~~~~~~~~G~iD   73 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFA-ET-------YPQLKPMSEQEPAELIEAVTSAYGQVD   73 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHH-HH-------CTTSEECCCCSHHHHHHHHHHHHSCCC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhhh-Cc-------EEEeccCCHHHHHHHHHHHHHHcCCCC
Confidence            8999999999999999999999999999999988776654332 22       246899999999999999999999999


Q ss_pred             EEEEcccCCCC---CCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcccccccc
Q 019722          117 LLINNAGKFAH---QHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQI  193 (336)
Q Consensus       117 ~lv~nAg~~~~---~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~~~  193 (336)
                      +||||||+...   ..+.+.++|++.+++|+.++|+++|+++|+|++++     .|+||++||.++..+           
T Consensus        74 iLVnNAg~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~-----~G~IV~isS~~~~~~-----------  137 (252)
T d1zmta1          74 VLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRK-----SGHIIFITSATPFGP-----------  137 (252)
T ss_dssp             EEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-----CCEEEEECCSTTTSC-----------
T ss_pred             EEEECCcCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccc-----cceeecccccccccc-----------
Confidence            99999997543   26788899999999999999999999999999876     599999999988776           


Q ss_pred             cCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccc---------hhHHHHHHHHHHhh
Q 019722          194 SRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRERE---------GFITDLVFFLTSKL  264 (336)
Q Consensus       194 ~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~---------~~~~~~~~~~~~~~  264 (336)
                            .+....|++||+++++|+|+|++|++++|  ||||+|+||+++|++.....         +.........+..+
T Consensus       138 ------~~~~~~Y~asKaal~~lt~~lA~ela~~g--IrVN~I~PG~i~T~~~~~~~~~~~~~~~~e~~~~~~~~~pl~R  209 (252)
T d1zmta1         138 ------WKELSTYTSARAGACTLANALSKELGEYN--IPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTALQR  209 (252)
T ss_dssp             ------CTTCHHHHHHHHHHHHHHHHHHHHHGGGT--CCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHHHSSSSS
T ss_pred             ------cccccccccccccHHHHHHHHHHHhcccC--cEEEEEecCCCcCcchhhhhhcccccCCHHHHHHHHhcCCCCC
Confidence                  67788999999999999999999999988  99999999999999977642         12223334445567


Q ss_pred             cCChHHHHHHHHHHHhcCccccCCceeeccCccccc
Q 019722          265 LKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWT  300 (336)
Q Consensus       265 ~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~  300 (336)
                      ..+|+|+|..++||++ +.++|+||+.+.+||+...
T Consensus       210 ~g~pedvA~~v~fL~S-~~s~~iTG~~i~vdGG~~~  244 (252)
T d1zmta1         210 LGTQKELGELVAFLAS-GSCDYLTGQVFWLAGGFPM  244 (252)
T ss_dssp             CBCHHHHHHHHHHHHT-TSCGGGTTCEEEESTTCCC
T ss_pred             CcCHHHHHHHHHHHhC-chhcCCcCCeEEECCCcee
Confidence            8899999999999997 8889999999999998543

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=8.4e-45  Score=321.55  Aligned_cols=240  Identities=16%  Similarity=0.134  Sum_probs=200.2

Q ss_pred             CCCCCCEEEEeCCCC--hHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHH
Q 019722           31 PNLSSVTAIITGATS--GIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQF  108 (336)
Q Consensus        31 ~~l~gk~~lItGgs~--gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~  108 (336)
                      .||+||++|||||+|  |||+++|++|+++|++|++++|+++..++. +++...  ..+..++++|++++++++++++++
T Consensus         4 ~~L~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~-~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~   80 (256)
T d1ulua_           4 VDLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEA-EKLAEA--LGGALLFRADVTQDEELDALFAGV   80 (256)
T ss_dssp             ECCTTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHHH-HHHHHH--TTCCEEEECCTTCHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHH-HHhhhc--cCcccccccccCCHHHHHHHHHHH
Confidence            479999999999987  999999999999999999999997654443 344443  457788999999999999999999


Q ss_pred             HhcCCCccEEEEcccCCCC------CCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccc
Q 019722          109 HSLNLPLNLLINNAGKFAH------QHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWF  182 (336)
Q Consensus       109 ~~~~~~id~lv~nAg~~~~------~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~  182 (336)
                      .+.+++||+||||||+...      ..+.+.++|+..+++|+.+++.++|++.|.|++       +|+||++||..+..+
T Consensus        81 ~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~-------~G~Iv~isS~~~~~~  153 (256)
T d1ulua_          81 KEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLRE-------GGGIVTLTYYASEKV  153 (256)
T ss_dssp             HHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE-------EEEEEEEECGGGTSB
T ss_pred             HHhcCCceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhcc-------CCEEEEEeehHhcCC
Confidence            9999999999999997643      245677889999999999999999999999865       379999999988776


Q ss_pred             cCCcccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccc---hhHHHHHHH
Q 019722          183 SGDMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRERE---GFITDLVFF  259 (336)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~---~~~~~~~~~  259 (336)
                                       .+....|+++|+++++|+|+++.|++++|  ||||+|+||+++|++.....   +........
T Consensus       154 -----------------~~~~~~Y~asKaal~~ltr~lA~ela~~g--IrVN~I~PG~i~t~~~~~~~~~~~~~~~~~~~  214 (256)
T d1ulua_         154 -----------------VPKYNVMAIAKAALEASVRYLAYELGPKG--VRVNAISAGPVRTVAARSIPGFTKMYDRVAQT  214 (256)
T ss_dssp             -----------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECCC----------CHHHHHHHHHH
T ss_pred             -----------------CCCchHHHHHHHHHHHHHHHHHHHhcccC--CEEeeeccceeeeccccchhhhHHHHHHHHhc
Confidence                             77788999999999999999999999988  99999999999999887753   233444455


Q ss_pred             HHHhhcCChHHHHHHHHHHHhcCccccCCceeeccCccccc
Q 019722          260 LTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWT  300 (336)
Q Consensus       260 ~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~  300 (336)
                      .+..+..+|+|+|.+++||++ +.++|+||+.+.+||+...
T Consensus       215 ~pl~R~~~pedvA~~v~fL~S-~~s~~itG~~i~VDGG~~~  254 (256)
T d1ulua_         215 APLRRNITQEEVGNLGLFLLS-PLASGITGEVVYVDAGYHI  254 (256)
T ss_dssp             STTSSCCCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTGGG
T ss_pred             CCCCCCcCHHHHHHHHHHHhC-chhCCccCCeEEECcCEeC
Confidence            667778899999999999997 8889999999999998543

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=100.00  E-value=2e-44  Score=321.81  Aligned_cols=249  Identities=20%  Similarity=0.260  Sum_probs=212.0

Q ss_pred             ccccccCCCCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCC-hHHHHHHHHHHHhhCCCCceEEEeccCCCHHH
Q 019722           22 TAEQVTDGCPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARS-LKAAEEAKARLASDCPGSDIVVLPLDLSSLSS  100 (336)
Q Consensus        22 ~~~~~~~~~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~-~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~  100 (336)
                      .+.++++-..+|+||++|||||++|||+++|++|+++|++|++++|+ .+.++++.+++++.  +.++.++++|++++++
T Consensus         5 ~~~~~~~~~~sL~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~--g~~~~~~~~D~~~~~~   82 (272)
T d1g0oa_           5 IPGPLGPQSASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKN--GSDAACVKANVGVVED   82 (272)
T ss_dssp             CCSCSSGGGGCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHH
T ss_pred             CCCCCCCCCcCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHhh--CCceeeEeCCCCCHHH
Confidence            35566655678999999999999999999999999999999999876 56677777777766  5789999999999999


Q ss_pred             HHHHHHHHHhcCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCc
Q 019722          101 VRNFVSQFHSLNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSI  178 (336)
Q Consensus       101 v~~~~~~~~~~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~  178 (336)
                      +.++++++.+.++++|++|||+|.....  .+.+.++|++.+++|+.+++.++|++.|+|.+       .|++++++|..
T Consensus        83 v~~~~~~~~~~~g~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~-------~g~~i~i~s~~  155 (272)
T d1g0oa_          83 IVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEI-------GGRLILMGSIT  155 (272)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCT-------TCEEEEECCGG
T ss_pred             HHHHHHHHHHHhCCCCccccccccchhhhhhhhhhhHHHHHhhhccceeeeecccccccccc-------ccccccccccc
Confidence            9999999999999999999999976554  67888999999999999999999999999976       37999999876


Q ss_pred             cccccCCcccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccch-------
Q 019722          179 HSWFSGDMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREG-------  251 (336)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~-------  251 (336)
                      +...+                .+.+..|+++|+++++|+|++++|+++.|  ||||+|+||+|+|++.+....       
T Consensus       156 ~~~~~----------------~~~~~~Y~asKaal~~ltk~lA~e~~~~g--IrVN~I~PG~v~T~~~~~~~~~~~~~~~  217 (272)
T d1g0oa_         156 GQAKA----------------VPKHAVYSGSKGAIETFARCMAIDMADKK--ITVNVVAPGGIKTDMYHAVCREYIPNGE  217 (272)
T ss_dssp             GTCSS----------------CSSCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECCBSSHHHHHHGGGGSTTCT
T ss_pred             ccccc----------------ccchhhHHHHHHHHHHHHHHHHHHhchhC--eEEEEEccCCcCChHHHHHHHhhhhccc
Confidence            55431                56677899999999999999999999988  999999999999998654311       


Q ss_pred             --hHH-----HHHHHHHHhhcCChHHHHHHHHHHHhcCccccCCceeeccCccc
Q 019722          252 --FIT-----DLVFFLTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEA  298 (336)
Q Consensus       252 --~~~-----~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  298 (336)
                        ...     ......+..+..+|+|+|.+++||++ +.++++||+.+.+||+.
T Consensus       218 ~~~~~~~~~~~~~~~~PlgR~~~peevA~~v~fL~s-~~s~~itG~~i~vDGG~  270 (272)
T d1g0oa_         218 NLSNEEVDEYAAVQWSPLRRVGLPIDIARVVCFLAS-NDGGWVTGKVIGIDGGA  270 (272)
T ss_dssp             TCCHHHHHHHHHHHSCTTCSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTC
T ss_pred             ccchHHHHHHHHHccCCCCCCcCHHHHHHHHHHHhC-chhcCccCceEeECCCC
Confidence              011     11223345678899999999999997 88899999999999975

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=100.00  E-value=1.4e-44  Score=320.51  Aligned_cols=239  Identities=26%  Similarity=0.248  Sum_probs=205.0

Q ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEee-CChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHh
Q 019722           32 NLSSVTAIITGATSGIGAETARVLAKRGARLVLPA-RSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHS  110 (336)
Q Consensus        32 ~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~-r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  110 (336)
                      +|+||+||||||++|||+++|++|+++|++|++++ |+.+.++++.+++++.  +.++++++||++++++++.+++++.+
T Consensus         3 ~L~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~--g~~~~~~~~D~~~~~~v~~~~~~~~~   80 (259)
T d1ja9a_           3 PLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKL--GAQGVAIQADISKPSEVVALFDKAVS   80 (259)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHc--CCCceEecCCCCCHHHHHHHHHHHHH
Confidence            48999999999999999999999999999999875 5666677888888765  56899999999999999999999999


Q ss_pred             cCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccc
Q 019722          111 LNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIR  188 (336)
Q Consensus       111 ~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~  188 (336)
                      ++++||++|||||.....  .+.+.++|++.+++|+.+++.++|+++|+|+++       +++++++|..+...+     
T Consensus        81 ~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~-------g~~iii~s~~~~~~~-----  148 (259)
T d1ja9a_          81 HFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRG-------GRIILTSSIAAVMTG-----  148 (259)
T ss_dssp             HHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEE-------EEEEEECCGGGTCCS-----
T ss_pred             HcCCCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcC-------CcccccccccccccC-----
Confidence            999999999999986554  667889999999999999999999999999653       688888887665421     


Q ss_pred             ccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccc--------------hhHH
Q 019722          189 YLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRERE--------------GFIT  254 (336)
Q Consensus       189 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~--------------~~~~  254 (336)
                                 .+.+..|+++|+++++|+|+|++|+++.|  ||||+|+||+++|+|.+...              ....
T Consensus       149 -----------~~~~~~Y~asK~al~~l~r~lA~e~~~~g--IrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~  215 (259)
T d1ja9a_         149 -----------IPNHALYAGSKAAVEGFCRAFAVDCGAKG--VTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDE  215 (259)
T ss_dssp             -----------CCSCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHH
T ss_pred             -----------CCCchhHHHHHHHHHHHHHHHHHHHhhcC--eEEeccCcCCccChhhhhhhhhhhhhhcccCCHHHHHH
Confidence                       67788999999999999999999999988  99999999999999754321              1122


Q ss_pred             HHHHHHHHhhcCChHHHHHHHHHHHhcCccccCCceeeccCccc
Q 019722          255 DLVFFLTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEA  298 (336)
Q Consensus       255 ~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  298 (336)
                      ......+..+..+|+|++++++||++ +.++++||+.+.+||+.
T Consensus       216 ~~~~~~pl~R~g~p~eVa~~v~fL~S-~~a~~itG~~i~vDGG~  258 (259)
T d1ja9a_         216 GLANMNPLKRIGYPADIGRAVSALCQ-EESEWINGQVIKLTGGG  258 (259)
T ss_dssp             HHHHTSTTSSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTC
T ss_pred             HHHhCCCCCCCcCHHHHHHHHHHHhC-chhcCCcCceEEeCCCC
Confidence            22334455678899999999999998 77899999999999863

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=6.4e-44  Score=311.48  Aligned_cols=226  Identities=18%  Similarity=0.209  Sum_probs=193.1

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcC
Q 019722           33 LSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLN  112 (336)
Q Consensus        33 l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  112 (336)
                      |+||++|||||++|||+++|++|+++|++|++++|+++.+++           ....++.||+++.      ++.+.+.+
T Consensus         2 LkgK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~~~l~~-----------~~~~~~~~Dv~~~------~~~~~~~~   64 (234)
T d1o5ia_           2 IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKR-----------SGHRYVVCDLRKD------LDLLFEKV   64 (234)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHH-----------TCSEEEECCTTTC------HHHHHHHS
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHh-----------cCCcEEEcchHHH------HHHHHHHh
Confidence            689999999999999999999999999999999999765442           2345678999864      34455668


Q ss_pred             CCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccccc
Q 019722          113 LPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYL  190 (336)
Q Consensus       113 ~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~  190 (336)
                      +++|+||||||.....  .+.+.++|++.+++|+.+++.++|+++|.|++++     .|+||+++|..+..+        
T Consensus        65 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~-----~G~ii~i~S~~~~~~--------  131 (234)
T d1o5ia_          65 KEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKG-----WGRIVAITSFSVISP--------  131 (234)
T ss_dssp             CCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-----CEEEEEECCGGGTSC--------
T ss_pred             CCCcEEEecccccCCcchhhhhhHHHHHHhhhhhhhhhhhhhcccccccccc-----ccccccccccccccc--------
Confidence            9999999999976543  6788999999999999999999999999999876     589999999877765        


Q ss_pred             ccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccc--hhHHHHHHHHHHhhcCCh
Q 019722          191 GQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRERE--GFITDLVFFLTSKLLKTI  268 (336)
Q Consensus       191 ~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~--~~~~~~~~~~~~~~~~~~  268 (336)
                               .+....|+++|+++++|+|++++|+++.|  ||||+|+||+++|++.+...  ..........+..+..+|
T Consensus       132 ---------~~~~~~Y~asKaal~~ltk~lA~ela~~g--IrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~pl~R~~~p  200 (234)
T d1o5ia_         132 ---------IENLYTSNSARMALTGFLKTLSFEVAPYG--ITVNCVAPGWTETERVKELLSEEKKKQVESQIPMRRMAKP  200 (234)
T ss_dssp             ---------CTTBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSBCCTTHHHHSCHHHHHHHHTTSTTSSCBCH
T ss_pred             ---------ccccccchhHHHHHHHHHHHHHHHhcccC--eEEeecccCccchhhhhhhcCHHHHHHHHhcCCCCCCcCH
Confidence                     67788999999999999999999999998  99999999999999976643  222333345566778899


Q ss_pred             HHHHHHHHHHHhcCccccCCceeeccCccccc
Q 019722          269 PQGAATTCYVAIHPRLVNVSGKYFADCNEAWT  300 (336)
Q Consensus       269 ~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~  300 (336)
                      +|+|..++||++ +.++|+||+.+.+||+...
T Consensus       201 ediA~~v~fL~S-~~s~~itG~~i~vDGG~s~  231 (234)
T d1o5ia_         201 EEIASVVAFLCS-EKASYLTGQTIVVDGGLSK  231 (234)
T ss_dssp             HHHHHHHHHHHS-GGGTTCCSCEEEESTTCCC
T ss_pred             HHHHHHHHHHhC-hhhcCCcCcEEEECccccc
Confidence            999999999997 8899999999999998543

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=100.00  E-value=9.5e-44  Score=321.02  Aligned_cols=271  Identities=17%  Similarity=0.190  Sum_probs=221.6

Q ss_pred             cccccCCCCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHH
Q 019722           23 AEQVTDGCPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVR  102 (336)
Q Consensus        23 ~~~~~~~~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~  102 (336)
                      ..+|.+ .++|+||+||||||++|||+++|++|+++|++|++++|+.+++++..+++.++. +.++.++++|++++++++
T Consensus        14 ~~~~~~-~~~l~gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~~-g~~~~~~~~D~~~~~~v~   91 (294)
T d1w6ua_          14 QKAMLP-PNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQT-GNKVHAIQCDVRDPDMVQ   91 (294)
T ss_dssp             CSCCSC-TTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH-SSCEEEEECCTTCHHHHH
T ss_pred             cccCCC-CCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHhc-CCceEEEEecccChHHHH
Confidence            334444 578999999999999999999999999999999999999999999998887765 568999999999999999


Q ss_pred             HHHHHHHhcCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccc
Q 019722          103 NFVSQFHSLNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHS  180 (336)
Q Consensus       103 ~~~~~~~~~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~  180 (336)
                      .+++.+.+.++++|+||||||.....  ...+.+++++.+.+|+.+.+.+.+...+.+.....    .+++++++|.++.
T Consensus        92 ~~~~~~~~~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~----~~~i~~~ss~~~~  167 (294)
T d1w6ua_          92 NTVSELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQK----GAAFLSITTIYAE  167 (294)
T ss_dssp             HHHHHHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC----CEEEEEECCTHHH
T ss_pred             HHhhhhhhhccccchhhhhhhhccccccccchhhhhhhheeeecccchhhhhhhhcccccccc----cccccccccchhh
Confidence            99999999999999999999976654  66778899999999999999999998888776542    5778888888777


Q ss_pred             cccCCcccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccc----hhHHHH
Q 019722          181 WFSGDMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRERE----GFITDL  256 (336)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~----~~~~~~  256 (336)
                      .+                 .+...+|+++|+|+++|+|++|+|+++.|  ||||+|+||+|+|++.....    ......
T Consensus       168 ~~-----------------~~~~~~YsasKaal~~ltk~lA~ela~~g--IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~  228 (294)
T d1w6ua_         168 TG-----------------SGFVVPSASAKAGVEAMSKSLAAEWGKYG--MRFNVIQPGPIKTKGAFSRLDPTGTFEKEM  228 (294)
T ss_dssp             HC-----------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCBCC------CCTTSHHHHHH
T ss_pred             hc-----------------ccccchHHHHHHHHHHHHHHHHHHHhHhC--eEEEEEccCccccchhhhccCCcHHHHHHH
Confidence            65                 66788899999999999999999999988  99999999999999876643    233344


Q ss_pred             HHHHHHhhcCChHHHHHHHHHHHhcCccccCCceeeccCcccccc--cCCCC-HHHHHHHHHHHHH
Q 019722          257 VFFLTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWTS--KLGSN-SNEASRLWAASEL  319 (336)
Q Consensus       257 ~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~~--~~~~~-~~~~~~~w~~~~~  319 (336)
                      ....+..+..+|+|+|..++||++ +.+.|+||+.+.+||+..+.  ....+ .......|+-+++
T Consensus       229 ~~~~pl~R~~~pediA~~v~fL~s-d~s~~itG~~i~vDGG~~l~~~~~~~~~~~~~~~~~~~~~~  293 (294)
T d1w6ua_         229 IGRIPCGRLGTVEELANLAAFLCS-DYASWINGAVIKFDGGEEVLISGEFNDLRKVTKEQWDTIEE  293 (294)
T ss_dssp             HTTCTTSSCBCHHHHHHHHHHHTS-GGGTTCCSCEEEESTTHHHHHHSTTGGGGGCCHHHHHHHTT
T ss_pred             hhcCCCCCCCCHHHHHHHHHHHhC-chhcCCCCcEEEECCChhheeCCCCCchhhcchhhhhhHhh
Confidence            445566788899999999999997 78899999999999985422  22222 2334566665543

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=2.7e-43  Score=318.17  Aligned_cols=252  Identities=15%  Similarity=0.135  Sum_probs=210.6

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCC---------hHHHHHHHHHHHhhCCCCceEEEeccCCCHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARS---------LKAAEEAKARLASDCPGSDIVVLPLDLSSLSS  100 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~---------~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~  100 (336)
                      .|+|+||+||||||++|||+++|++|+++|++|++.+|+         .+.+++..+++..     +.....+|+++.++
T Consensus         2 Pm~l~gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~d~~~~~~   76 (302)
T d1gz6a_           2 PLRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRR-----RGGKAVANYDSVEA   76 (302)
T ss_dssp             CCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHH-----TTCEEEEECCCGGG
T ss_pred             CcCcCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhh-----cccccccccchHHH
Confidence            478999999999999999999999999999999998654         5566777777654     34456789999999


Q ss_pred             HHHHHHHHHhcCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCc
Q 019722          101 VRNFVSQFHSLNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSI  178 (336)
Q Consensus       101 v~~~~~~~~~~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~  178 (336)
                      ++++++++.+.+|+||+||||||+....  .+.+.++|++++++|+.|+|.++|+++|+|++++     .|+||++||.+
T Consensus        77 ~~~~v~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~-----~G~IV~isS~~  151 (302)
T d1gz6a_          77 GEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQN-----YGRIIMTASAS  151 (302)
T ss_dssp             HHHHHHHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-----CEEEEEECCHH
T ss_pred             HHHHHHHHHHHcCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCC-----CcEEEEeCChh
Confidence            9999999999999999999999987654  7789999999999999999999999999999886     59999999999


Q ss_pred             cccccCCcccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHHHH
Q 019722          179 HSWFSGDMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVF  258 (336)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~  258 (336)
                      +..+                 .++...|++||+++.+|+++++.|+++.|  ||||+|+||++.|++.....+.      
T Consensus       152 ~~~~-----------------~~~~~~Y~asKaal~~lt~~la~E~~~~g--IrVN~I~PG~~~t~~~~~~~~~------  206 (302)
T d1gz6a_         152 GIYG-----------------NFGQANYSAAKLGLLGLANTLVIEGRKNN--IHCNTIAPNAGSRMTETVMPED------  206 (302)
T ss_dssp             HHHC-----------------CTTCHHHHHHHHHHHHHHHHHHHHTGGGT--EEEEEEEEECCSTTTGGGSCHH------
T ss_pred             hcCC-----------------CCCcHHHHHHHHHHHHHHHHHHHHHhccC--CceeeeCCCCCCcchhhcCcHh------
Confidence            8877                 77888999999999999999999999988  9999999999988876654432      


Q ss_pred             HHHHhhcCChHHHHHHHHHHHhcCccccCCceeeccCcccc-----cc---------cCCCCHHHHHHHHHHHHHhh
Q 019722          259 FLTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAW-----TS---------KLGSNSNEASRLWAASELLV  321 (336)
Q Consensus       259 ~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~-----~~---------~~~~~~~~~~~~w~~~~~~~  321 (336)
                         ......|+|+|..++||++ +.+ ++||+.+.++|+..     ..         ....+.+.-..-|+.+.+.-
T Consensus       207 ---~~~~~~PedvA~~v~fL~S-~~a-~itG~~i~vdGG~~~~~~~~~~~g~~~~~~~~~~t~e~i~~~~~~i~d~~  278 (302)
T d1gz6a_         207 ---LVEALKPEYVAPLVLWLCH-ESC-EENGGLFEVGAGWIGKLRWERTLGAIVRKRNQPMTPEAVRDNWVKICDFS  278 (302)
T ss_dssp             ---HHHHSCGGGTHHHHHHHTS-TTC-CCCSCEEEEETTEEEEEEEEECCCEECCBTTBCCCHHHHHHTHHHHTCCT
T ss_pred             ---hHhcCCHHHHHHHHHHHcC-CCc-CCCCcEEEeCCCceeEEEEeecCcccccCCCCCCCHHHHHHHHHHHhCcc
Confidence               1234579999999999986 654 78999999988621     11         11224566677787665433

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=3.6e-43  Score=311.55  Aligned_cols=239  Identities=23%  Similarity=0.246  Sum_probs=204.8

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHH---CCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHH
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAK---RGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQ  107 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~---~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~  107 (336)
                      ..|+||+||||||++|||+++|++|++   +|++|++++|+.++++++.+++....++.++.+++||++++++++++++.
T Consensus         2 ~~L~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~   81 (259)
T d1oaaa_           2 DGLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSA   81 (259)
T ss_dssp             CCCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHH
Confidence            468999999999999999999999996   79999999999999999999999988888999999999999999999999


Q ss_pred             HHhc----CCCccEEEEcccCCCCC-----CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCc
Q 019722          108 FHSL----NLPLNLLINNAGKFAHQ-----HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSI  178 (336)
Q Consensus       108 ~~~~----~~~id~lv~nAg~~~~~-----~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~  178 (336)
                      +.+.    ++.+|++|||||.....     .+.+.++|++++++|+.++++++|+++|+|++++   +..|+||++||.+
T Consensus        82 ~~~~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~---~~~g~Iv~isS~~  158 (259)
T d1oaaa_          82 VRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSP---GLSKTVVNISSLC  158 (259)
T ss_dssp             HHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCT---TCEEEEEEECCGG
T ss_pred             HHHhhhhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcC---CCccccccccccc
Confidence            8763    46799999999975432     5678899999999999999999999999998653   1247999999998


Q ss_pred             cccccCCcccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccc------hh
Q 019722          179 HSWFSGDMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRERE------GF  252 (336)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~------~~  252 (336)
                      +..+                 .+++..|++||+++++|+++|+.|  ..|  ||||+|+||+|.|+|.+...      +.
T Consensus       159 ~~~~-----------------~~~~~~Y~asKaal~~lt~~la~e--~~g--IrVn~v~PG~i~T~~~~~~~~~~~~~~~  217 (259)
T d1oaaa_         159 ALQP-----------------YKGWGLYCAGKAARDMLYQVLAAE--EPS--VRVLSYAPGPLDNDMQQLARETSKDPEL  217 (259)
T ss_dssp             GTSC-----------------CTTCHHHHHHHHHHHHHHHHHHHH--CTT--EEEEEEECCSBSSHHHHHHHHHCSCHHH
T ss_pred             ccCC-----------------CccchHHHHHHHHHHHHHHHHHhC--CCC--CEEEEEEcCCCCCHHHHHhhhcCCCHHH
Confidence            8876                 778899999999999999999998  445  99999999999999876432      22


Q ss_pred             HHHHHHHHHHhhcCChHHHHHHHHHHHhcCccccCCceeeccC
Q 019722          253 ITDLVFFLTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADC  295 (336)
Q Consensus       253 ~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~  295 (336)
                      ...+....+..+..+|+|+|..++++++.  .+|+||++|++.
T Consensus       218 ~~~~~~~~~~~r~~~p~evA~~i~~ll~~--~s~~TG~~idv~  258 (259)
T d1oaaa_         218 RSKLQKLKSDGALVDCGTSAQKLLGLLQK--DTFQSGAHVDFY  258 (259)
T ss_dssp             HHHHHHHHHTTCSBCHHHHHHHHHHHHHH--CCSCTTEEEETT
T ss_pred             HHHHHhcCCCCCCCCHHHHHHHHHHHhhh--ccCCCCCeEEec
Confidence            22333344556678999999999999973  368999999764

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.4e-42  Score=304.23  Aligned_cols=220  Identities=26%  Similarity=0.291  Sum_probs=195.7

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      ..+++||++|||||++|||+++|++|+++|++|++++|+.++++++.+++...  +.+++++.||++|+++++++++++.
T Consensus         2 ~~~l~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~~~~~--~~~~~~~~~Dvs~~~~v~~~~~~i~   79 (244)
T d1yb1a_           2 RKSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGL--GAKVHTFVVDCSNREDIYSSAKKVK   79 (244)
T ss_dssp             CCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEeeCCCHHHHHHHHHHHH
Confidence            45799999999999999999999999999999999999999999999999865  5689999999999999999999999


Q ss_pred             hcCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcc
Q 019722          110 SLNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMI  187 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~  187 (336)
                      +.+|++|++|||||.....  .+.+.+.|++++++|+.|+++++++++|.|++++     .|+||++||.++..+     
T Consensus        80 ~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-----~G~Iv~isS~~~~~~-----  149 (244)
T d1yb1a_          80 AEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNN-----HGHIVTVASAAGHVS-----  149 (244)
T ss_dssp             HHTCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-----CEEEEEECCCC-CCC-----
T ss_pred             HHcCCCceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcC-----CceEEEeecchhcCC-----
Confidence            9999999999999977654  5677889999999999999999999999999876     589999999998876     


Q ss_pred             cccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCC-CcEEEEEeeCCceeCCCCCccchhHHHHHHHHHHhhcC
Q 019722          188 RYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQME-ANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSKLLK  266 (336)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g-~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~  266 (336)
                                  .+.+..|++||+|+.+|+++|+.|+++.+ .+|+||+|+||+|+|+|.+...         .......
T Consensus       150 ------------~~~~~~Y~asKaal~~~~~~La~El~~~~~~gI~V~~i~PG~v~T~~~~~~~---------~~~~~~~  208 (244)
T d1yb1a_         150 ------------VPFLLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKNPS---------TSLGPTL  208 (244)
T ss_dssp             ------------HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTCTH---------HHHCCCC
T ss_pred             ------------CCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCEEEEEEEcCCCCChhhhCcC---------ccccCCC
Confidence                        78889999999999999999999998742 3599999999999999987631         1223456


Q ss_pred             ChHHHHHHHHHHHhcC
Q 019722          267 TIPQGAATTCYVAIHP  282 (336)
Q Consensus       267 ~~~~~a~~~~~l~~~~  282 (336)
                      +|++++..++..+..+
T Consensus       209 ~pe~va~~i~~~~~~~  224 (244)
T d1yb1a_         209 EPEEVVNRLMHGILTE  224 (244)
T ss_dssp             CHHHHHHHHHHHHHTT
T ss_pred             CHHHHHHHHHHHHhcC
Confidence            8899999999887643

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=100.00  E-value=4.1e-43  Score=309.77  Aligned_cols=236  Identities=24%  Similarity=0.255  Sum_probs=197.8

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCC-CHHHHHHHHHHHH
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLS-SLSSVRNFVSQFH  109 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~-~~~~v~~~~~~~~  109 (336)
                      ++|+||+||||||++|||+++|++|+++|++|++++|+.++.+. .++++...++.++.++.+|++ +.++++++++++.
T Consensus         1 m~l~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~-~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~   79 (254)
T d1sbya1           1 MDLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTA-LAELKAINPKVNITFHTYDVTVPVAESKKLLKKIF   79 (254)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHH-HHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHH-HHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHH
Confidence            68999999999999999999999999999999999887766443 455566666779999999998 6778999999999


Q ss_pred             hcCCCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcccc
Q 019722          110 SLNLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRY  189 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~  189 (336)
                      +.+++||+||||||..      +.++|++++++|+.|++.++++++|.|.+++.  +..|+||++||.++..+       
T Consensus        80 ~~~g~iDilvnnAG~~------~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~--~~~g~Ii~isS~~~~~~-------  144 (254)
T d1sbya1          80 DQLKTVDILINGAGIL------DDHQIERTIAINFTGLVNTTTAILDFWDKRKG--GPGGIIANICSVTGFNA-------  144 (254)
T ss_dssp             HHHSCCCEEEECCCCC------CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGT--CCCEEEEEECCGGGTSC-------
T ss_pred             HHcCCCCEEEeCCCCC------CHHHHHHHHHHHhHHHHHHHHHHHHHhhhccc--CCCceEEEEechhhccC-------
Confidence            9999999999999964      56889999999999999999999999987642  23589999999998876       


Q ss_pred             cccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccch---hHHHHHHHHHHhhcC
Q 019722          190 LGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREG---FITDLVFFLTSKLLK  266 (336)
Q Consensus       190 ~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~---~~~~~~~~~~~~~~~  266 (336)
                                .+++.+|++||+++.+|+++|+.|+.+.|  ||||+|+||+|+|+|.+....   ............+..
T Consensus       145 ----------~~~~~~Y~asKaal~~~t~~la~el~~~g--IrVn~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~  212 (254)
T d1sbya1         145 ----------IHQVPVYSASKAAVVSFTNSLAKLAPITG--VTAYSINPGITRTPLVHTFNSWLDVEPRVAELLLSHPTQ  212 (254)
T ss_dssp             ----------CTTSHHHHHHHHHHHHHHHHHHHHHHHHS--EEEEEEEECSEESHHHHSCCCGGGSCTTHHHHHTTSCCE
T ss_pred             ----------CCCCHHHHHHHHHHHHHHHHHHhhccccC--eEEEEEEeCCCcCccccccccchhHHHHHHhccccCCCC
Confidence                      77888999999999999999999999988  999999999999998665421   122222233334456


Q ss_pred             ChHHHHHHHHHHHhcCccccCCceeeccCccc
Q 019722          267 TIPQGAATTCYVAIHPRLVNVSGKYFADCNEA  298 (336)
Q Consensus       267 ~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  298 (336)
                      +++++|..+++++.    .+.+|+.+..+|+.
T Consensus       213 ~~e~va~~~~~~~~----~~~tG~vi~vdgG~  240 (254)
T d1sbya1         213 TSEQCGQNFVKAIE----ANKNGAIWKLDLGT  240 (254)
T ss_dssp             EHHHHHHHHHHHHH----HCCTTCEEEEETTE
T ss_pred             CHHHHHHHHHHhhh----CCCCCCEEEECCCE
Confidence            78888888887775    34599999888874

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.3e-42  Score=304.97  Aligned_cols=235  Identities=25%  Similarity=0.266  Sum_probs=197.9

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      |..|+||+||||||++|||+++++.|+++|++|++++|++++++++.    +   ...+....+|+.+.+.++.+.    
T Consensus         1 m~~l~gK~alITGas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~~~----~---~~~~~~~~~d~~~~~~~~~~~----   69 (245)
T d2ag5a1           1 MGRLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELE----K---YPGIQTRVLDVTKKKQIDQFA----   69 (245)
T ss_dssp             CCTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGG----G---STTEEEEECCTTCHHHHHHHH----
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH----h---ccCCceeeeeccccccccccc----
Confidence            45599999999999999999999999999999999999987765433    2   346788889998877666554    


Q ss_pred             hcCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcc
Q 019722          110 SLNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMI  187 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~  187 (336)
                      +.++++|+||||||.....  .+.+.++|++.+++|+.+++.++|++.|.|.+++     .|+||+++|..+...+    
T Consensus        70 ~~~~~id~lVn~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~-----~g~Ii~isS~~~~~~~----  140 (245)
T d2ag5a1          70 NEVERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQK-----SGNIINMSSVASSVKG----  140 (245)
T ss_dssp             HHCSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-----CEEEEEECCSBTTTBC----
T ss_pred             cccccceeEEecccccCCCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCC-----CceeeeeechhhccCC----
Confidence            4467999999999987664  6788999999999999999999999999999876     5899999998765321    


Q ss_pred             cccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccch-------hHHHHHHHH
Q 019722          188 RYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREG-------FITDLVFFL  260 (336)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~-------~~~~~~~~~  260 (336)
                                  .+...+|+++|+++++|+|++|+|+++.|  ||||+|+||+++|++.+....       .........
T Consensus       141 ------------~~~~~~Y~~sKaal~~l~r~lA~e~~~~g--IrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~  206 (245)
T d2ag5a1         141 ------------VVNRCVYSTTKAAVIGLTKSVAADFIQQG--IRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQ  206 (245)
T ss_dssp             ------------CTTBHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTC
T ss_pred             ------------ccchhHHHHHHHHHHHHHHHHHHHhhhhC--cEEEEEeeceeechhhHhhhhhhhhhHHHHHHHHhcC
Confidence                        67788999999999999999999999998  999999999999998765421       122333344


Q ss_pred             HHhhcCChHHHHHHHHHHHhcCccccCCceeeccCcccc
Q 019722          261 TSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAW  299 (336)
Q Consensus       261 ~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  299 (336)
                      +..+..+|+|++..++||++ +.+.++||+.+.+||+..
T Consensus       207 pl~R~~~pedva~~v~fL~s-~~s~~iTG~~i~VDGG~s  244 (245)
T d2ag5a1         207 KTGRFATAEEIAMLCVYLAS-DESAYVTGNPVIIDGGWS  244 (245)
T ss_dssp             TTSSCEEHHHHHHHHHHHHS-GGGTTCCSCEEEECTTGG
T ss_pred             CCCCCcCHHHHHHHHHHHhC-hhhCCCcCceEEeCCCcC
Confidence            55667889999999999997 888999999999998754

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1e-41  Score=304.63  Aligned_cols=238  Identities=26%  Similarity=0.343  Sum_probs=194.5

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHC-CCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCCC
Q 019722           36 VTAIITGATSGIGAETARVLAKR-GARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLP  114 (336)
Q Consensus        36 k~~lItGgs~gIG~aia~~L~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  114 (336)
                      ++||||||++|||+++|++|+++ |++|++++|+.++++++.+++++.  +.++.+++||+++.++++++++++.+.+++
T Consensus         4 rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dvs~~~sv~~~~~~~~~~~g~   81 (275)
T d1wmaa1           4 HVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAE--GLSPRFHQLDIDDLQSIRALRDFLRKEYGG   81 (275)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHT--TCCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             eEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEEecCCHHHHHHHHHHHHHhcCC
Confidence            56799999999999999999986 899999999999999999999887  567899999999999999999999999999


Q ss_pred             ccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccccc--
Q 019722          115 LNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYL--  190 (336)
Q Consensus       115 id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~--  190 (336)
                      ||+||||||+....  .+.+.++|+.++++|+.|++.++++++|.|++       .||||++||..+..+.+...+|.  
T Consensus        82 iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~-------~g~ivnisS~~~~~~~~~~~~y~~~  154 (275)
T d1wmaa1          82 LDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKP-------QGRVVNVSSIMSVRALKSCSPELQQ  154 (275)
T ss_dssp             EEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEE-------EEEEEEECCHHHHHHHHTSCHHHHH
T ss_pred             cEEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh-------cCCcccccccceeccccccchhhhh
Confidence            99999999987654  55567889999999999999999999999964       37999999987654322111110  


Q ss_pred             ----------------------ccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccC--CCcEEEEEeeCCceeCCCC
Q 019722          191 ----------------------GQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQM--EANVTVNCVHPGIVRTRLT  246 (336)
Q Consensus       191 ----------------------~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~--g~~I~vn~v~PG~v~T~~~  246 (336)
                                            ...........+...|++||+++..|++.+++++++.  +.+|+||+|+||+|+|+|.
T Consensus       155 k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~sK~a~~~~t~~la~~l~~~~~~~~I~vn~v~PG~v~T~m~  234 (275)
T d1wmaa1         155 KFRSETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMA  234 (275)
T ss_dssp             HHHCSSCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTT
T ss_pred             hhcccccchhhhccccccchhcccccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecccccCCcc
Confidence                                  0001111112334579999999999999999999763  2359999999999999998


Q ss_pred             CccchhHHHHHHHHHHhhcCChHHHHHHHHHHHh-cCccccCCceeeccCc
Q 019722          247 REREGFITDLVFFLTSKLLKTIPQGAATTCYVAI-HPRLVNVSGKYFADCN  296 (336)
Q Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~-~~~~~~~~G~~~~~~~  296 (336)
                      +..              ...+|+|+|.+++|++. .++..+++|+|+..+.
T Consensus       235 ~~~--------------~~~~pee~A~~~~~~a~~~~~~~~~~G~~~~~~~  271 (275)
T d1wmaa1         235 GPK--------------ATKSPEEGAETPVYLALLPPDAEGPHGQFVSEKR  271 (275)
T ss_dssp             CTT--------------CSBCHHHHTHHHHHHHSCCTTCCCCCSCEEETTE
T ss_pred             cCc--------------ccCCHHHHHHHHHHHHcCChhhcCCCeEEEECCE
Confidence            763              24579999999999974 4566788999997554

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.8e-40  Score=290.93  Aligned_cols=235  Identities=22%  Similarity=0.230  Sum_probs=195.5

Q ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhc
Q 019722           32 NLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSL  111 (336)
Q Consensus        32 ~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  111 (336)
                      +|+||+||||||++|||+++|++|+++|++|++++|+.+.+++..+++     +.+.....+|+.+...++...+.+...
T Consensus         2 slkGKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l-----~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (248)
T d2o23a1           2 SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKL-----GNNCVFAPADVTSEKDVQTALALAKGK   76 (248)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHH-----CTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh-----CCCcccccccccccccccccccccccc
Confidence            689999999999999999999999999999999999999888888776     568899999999999999999999888


Q ss_pred             CCCccEEEEcccCCCCC--------CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhcc-CCCCCeEEEEcCCccccc
Q 019722          112 NLPLNLLINNAGKFAHQ--------HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKA-TGIQGRIVNVSSSIHSWF  182 (336)
Q Consensus       112 ~~~id~lv~nAg~~~~~--------~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~-~~~~grIV~vsS~~~~~~  182 (336)
                      +..+|.+++|+++....        .+.+.+.|++++++|+.++++++|++.|+|...... ....|+||++||..+..+
T Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~  156 (248)
T d2o23a1          77 FGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEG  156 (248)
T ss_dssp             HSCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHC
T ss_pred             cccccccccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecchhhccC
Confidence            88999999998754322        445678999999999999999999999999765321 123689999999998876


Q ss_pred             cCCcccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHH-HHHHHHH
Q 019722          183 SGDMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFIT-DLVFFLT  261 (336)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~-~~~~~~~  261 (336)
                                       .+++.+|+++|+|+++|+|+|++|+++.|  ||||+|+||+++|+|.....+... ......+
T Consensus       157 -----------------~~~~~~Y~asKaal~~lt~~la~e~~~~g--IrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~p  217 (248)
T d2o23a1         157 -----------------QVGQAAYSASKGGIVGMTLPIARDLAPIG--IRVMTIAPGLFGTPLLTSLPEKVCNFLASQVP  217 (248)
T ss_dssp             -----------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCBCCC----------CHHHHTCS
T ss_pred             -----------------CCCchHHHHHHHHHHHHHHHHHHHhcccC--cceeeeccCceecchhhcCCHHHHHHHHhcCC
Confidence                             77888999999999999999999999988  999999999999999887643322 2223333


Q ss_pred             H-hhcCChHHHHHHHHHHHhcCccccCCceeec
Q 019722          262 S-KLLKTIPQGAATTCYVAIHPRLVNVSGKYFA  293 (336)
Q Consensus       262 ~-~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~  293 (336)
                      . .+..+|+|+|.+++|+++   .+|+||+.+.
T Consensus       218 l~~R~g~peevA~~v~fL~s---~~~itGq~I~  247 (248)
T d2o23a1         218 FPSRLGDPAEYAHLVQAIIE---NPFLNGEVIR  247 (248)
T ss_dssp             SSCSCBCHHHHHHHHHHHHH---CTTCCSCEEE
T ss_pred             CCCCCcCHHHHHHHHHHHHh---CCCCCceEeE
Confidence            2 567899999999999986   4789999885

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.4e-40  Score=296.89  Aligned_cols=233  Identities=21%  Similarity=0.207  Sum_probs=184.2

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEE---EeeCChHHHHHHHHHHHhh-CCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGARLV---LPARSLKAAEEAKARLASD-CPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~~V~---~~~r~~~~~~~~~~~l~~~-~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      ++|+||||||++|||+++|++|+++|++|+   ++.|+.+..+++.+..+.. ..+.++.+++||++|++++.++++++.
T Consensus         1 ~kkVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~   80 (285)
T d1jtva_           1 ARTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVT   80 (285)
T ss_dssp             CCEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCT
T ss_pred             CCCEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhcc
Confidence            468999999999999999999999998754   4456654444333333321 226789999999999999999998874


Q ss_pred             hcCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcc
Q 019722          110 SLNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMI  187 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~  187 (336)
                      +  +++|+||||||.....  .+.+.++|++++++|+.|++.++|+++|+|++++     .|+||++||.++..+     
T Consensus        81 ~--g~idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~-----~G~Iv~isS~~g~~~-----  148 (285)
T d1jtva_          81 E--GRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRG-----SGRVLVTGSVGGLMG-----  148 (285)
T ss_dssp             T--SCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-----CEEEEEEEEGGGTSC-----
T ss_pred             c--cchhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcC-----CCceEEEechhhcCC-----
Confidence            3  7899999999976654  6788999999999999999999999999999876     599999999998877     


Q ss_pred             cccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchh------------HHH
Q 019722          188 RYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGF------------ITD  255 (336)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~------------~~~  255 (336)
                                  .+....|++||+|+++|+++|+.|+++.|  ||||+|+||+|+|+|.+.....            ..+
T Consensus       149 ------------~~~~~~Y~asKaal~~l~~~la~El~~~g--IrVn~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~  214 (285)
T d1jtva_         149 ------------LPFNDVYCASKFALEGLCESLAVLLLPFG--VHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHR  214 (285)
T ss_dssp             ------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECCBCC-------CCHHHHHHTSCHHHHHH
T ss_pred             ------------CCCchHHHHHHHHHHHHHHHHHHHhhccC--cEEEEEecCCCCChHHHHhccCHHHHhhccchhHHHH
Confidence                        77888999999999999999999999988  9999999999999998764211            111


Q ss_pred             ------HHHHHHHhhcCChHHHHHHHHHHHhcCc--cccCCceee
Q 019722          256 ------LVFFLTSKLLKTIPQGAATTCYVAIHPR--LVNVSGKYF  292 (336)
Q Consensus       256 ------~~~~~~~~~~~~~~~~a~~~~~l~~~~~--~~~~~G~~~  292 (336)
                            .....+..+..+|+|+|..+++++..+.  ..|++|+.+
T Consensus       215 ~~~~~~~~~~~~~~~~~~PeeVA~~v~~~~~~~~p~~ry~~g~~~  259 (285)
T d1jtva_         215 FYQYLAHSKQVFREAAQNPEEVAEVFLTALRAPKPTLRYFTTERF  259 (285)
T ss_dssp             HHHHHHHHHHHHHHHCBCHHHHHHHHHHHHHCSSCCSEEESCSTT
T ss_pred             HHHHHHHHhhhhcccCCCHHHHHHHHHHHHhCCCCCeEEecHHHH
Confidence                  1123345567899999999999997553  456666543

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=100.00  E-value=2e-39  Score=285.52  Aligned_cols=230  Identities=24%  Similarity=0.284  Sum_probs=188.2

Q ss_pred             CCEEEEeCCCChHHHHHHHHHH---HCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHh-
Q 019722           35 SVTAIITGATSGIGAETARVLA---KRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHS-  110 (336)
Q Consensus        35 gk~~lItGgs~gIG~aia~~L~---~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~-  110 (336)
                      -|++|||||++|||+++|++|+   ++|++|++++|++++++++.+ +.+.  +.++.+++||++|+++++++++++.+ 
T Consensus         2 MKtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~-~~~~--~~~~~~~~~Dvs~~~~v~~~~~~i~~~   78 (248)
T d1snya_           2 MNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELED-LAKN--HSNIHILEIDLRNFDAYDKLVADIEGV   78 (248)
T ss_dssp             CSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHH-HHHH--CTTEEEEECCTTCGGGHHHHHHHHHHH
T ss_pred             cCEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH-HHhc--CCcEEEEEEEeccHHHHHHHHhhhHHH
Confidence            4899999999999999999997   579999999999988876654 4444  46899999999999999999999854 


Q ss_pred             -cCCCccEEEEcccCCCCC---CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhcc------CCCCCeEEEEcCCccc
Q 019722          111 -LNLPLNLLINNAGKFAHQ---HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKA------TGIQGRIVNVSSSIHS  180 (336)
Q Consensus       111 -~~~~id~lv~nAg~~~~~---~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~------~~~~grIV~vsS~~~~  180 (336)
                       .++++|+||||||+....   .+.+.++|++++++|+.|++.++++++|+|+++...      ....|++|+++|.++.
T Consensus        79 ~~~~~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii~i~S~~g~  158 (248)
T d1snya_          79 TKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGS  158 (248)
T ss_dssp             HGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGC
T ss_pred             hhcCCcceEEeeccccccCcccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhccccccccccccccccccccccc
Confidence             678999999999976543   567888999999999999999999999999986431      1235899999998876


Q ss_pred             cccCCcccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHHHHHH
Q 019722          181 WFSGDMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFL  260 (336)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~  260 (336)
                      ....              ..+++.+|++||+|+.+|+++++.|+++.|  |+||+|+||+|+|+|......         
T Consensus       159 ~~~~--------------~~~~~~~Y~aSKaal~~lt~~la~e~~~~g--I~vn~v~PG~v~T~m~~~~~~---------  213 (248)
T d1snya_         159 IQGN--------------TDGGMYAYRTSKSALNAATKSLSVDLYPQR--IMCVSLHPGWVKTDMGGSSAP---------  213 (248)
T ss_dssp             STTC--------------CSCCCHHHHHHHHHHHHHHHHHHHHHGGGT--CEEEEECCCSBCSTTTCTTCS---------
T ss_pred             cCCC--------------CCCChHHHHHHHHHHHHHHHHHHHHhCCCC--eEEEEcCCCcccCCcccccCC---------
Confidence            5311              155677999999999999999999999988  999999999999999876321         


Q ss_pred             HHhhcCChHHHHHHHHHHHhcCccccCCceeeccCccc
Q 019722          261 TSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEA  298 (336)
Q Consensus       261 ~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  298 (336)
                           ..+++.+..++.++... ....+|++|..+|..
T Consensus       214 -----~~~~~~~~~i~~~i~~l-~~~~tG~~i~~dG~~  245 (248)
T d1snya_         214 -----LDVPTSTGQIVQTISKL-GEKQNGGFVNYDGTP  245 (248)
T ss_dssp             -----BCHHHHHHHHHHHHHHC-CGGGTTCEECTTSCB
T ss_pred             -----CCchHHHHHHHHHHHhc-CccCCCcEEEECCeE
Confidence                 23455666666666532 244589999888754

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.9e-39  Score=286.24  Aligned_cols=217  Identities=23%  Similarity=0.206  Sum_probs=190.9

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcC
Q 019722           33 LSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLN  112 (336)
Q Consensus        33 l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  112 (336)
                      |+||+||||||++|||+++|++|+++|++|++++|+.++++++.+++.... +..+..+.+|+++...+..+.+.+.+.+
T Consensus        12 L~GK~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~~~~~~~   90 (269)
T d1xu9a_          12 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELG-AASAHYIAGTMEDMTFAEQFVAQAGKLM   90 (269)
T ss_dssp             GTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHT-CSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhhhh-cccchhhhhhhhhHHHHHHHHHHHHHHh
Confidence            899999999999999999999999999999999999999999988877664 5689999999999999999999999999


Q ss_pred             CCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccccc
Q 019722          113 LPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYL  190 (336)
Q Consensus       113 ~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~  190 (336)
                      +.+|++++|||.....  .+.+.++|++++++|+.|++.++++++|+|+++      +|+||++||.++..+        
T Consensus        91 g~~~~li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~------~G~ii~isS~~~~~~--------  156 (269)
T d1xu9a_          91 GGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQS------NGSIVVVSSLAGKVA--------  156 (269)
T ss_dssp             TSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH------TCEEEEEEEGGGTSC--------
T ss_pred             CCccccccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhc------CCcceEeccchhcCC--------
Confidence            9999999999976554  667889999999999999999999999999765      489999999998877        


Q ss_pred             ccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHHHHHHHHhhcCChHH
Q 019722          191 GQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSKLLKTIPQ  270 (336)
Q Consensus       191 ~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~  270 (336)
                               .+....|++||+|+++|+++|+.|+++.+.+|+||+|+||+|+|+|.+....       ........++++
T Consensus       157 ---------~p~~~~Y~asKaal~~~~~~La~El~~~~~~I~V~~v~PG~v~T~~~~~~~~-------~~~~~~~~~~e~  220 (269)
T d1xu9a_         157 ---------YPMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMKAVS-------GIVHMQAAPKEE  220 (269)
T ss_dssp             ---------CTTCHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHHHHHSC-------GGGGGGCBCHHH
T ss_pred             ---------CCCchHHHHHHHHHHHHHHHHHHHhhhcCCCEEEEEEecCcCCCcHHHHhcc-------CCccccCCCHHH
Confidence                     7888999999999999999999999876666999999999999998654211       112233457888


Q ss_pred             HHHHHHHHHh
Q 019722          271 GAATTCYVAI  280 (336)
Q Consensus       271 ~a~~~~~l~~  280 (336)
                      ++..++....
T Consensus       221 ~a~~i~~~~~  230 (269)
T d1xu9a_         221 CALEIIKGGA  230 (269)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHhh
Confidence            8888887665

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=7.1e-39  Score=282.25  Aligned_cols=233  Identities=28%  Similarity=0.301  Sum_probs=181.0

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCC--EEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHh
Q 019722           33 LSSVTAIITGATSGIGAETARVLAKRGA--RLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHS  110 (336)
Q Consensus        33 l~gk~~lItGgs~gIG~aia~~L~~~G~--~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  110 (336)
                      |+.|+||||||++|||+++|++|+++|+  +|++++|+.++++++.    +. .+.+++++++|++++++++++++++.+
T Consensus         1 M~~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~----~~-~~~~~~~~~~Dvs~~~~v~~~~~~i~~   75 (250)
T d1yo6a1           1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELK----SI-KDSRVHVLPLTVTCDKSLDTFVSKVGE   75 (250)
T ss_dssp             CCCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHH----TC-CCTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CcCCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHH----Hh-hCCceEEEEEecCCHHHHHHHHHHHHH
Confidence            5679999999999999999999999996  7999999998776543    22 256899999999999999999999988


Q ss_pred             cCC--CccEEEEcccCCCC---CCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccC------CCCCeEEEEcCCcc
Q 019722          111 LNL--PLNLLINNAGKFAH---QHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKAT------GIQGRIVNVSSSIH  179 (336)
Q Consensus       111 ~~~--~id~lv~nAg~~~~---~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~------~~~grIV~vsS~~~  179 (336)
                      .++  +||+||||||+...   ..+.+.++|++++++|+.|++.++++++|+|+++....      ...++++++++...
T Consensus        76 ~~~~~~idilinnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~s~~~~  155 (250)
T d1yo6a1          76 IVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLG  155 (250)
T ss_dssp             HHGGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGG
T ss_pred             HhCCCCeEEEEEcCcccCCCCccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccceeccccccccccc
Confidence            765  49999999997654   25678889999999999999999999999999875321      22578999988765


Q ss_pred             ccccCCcccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHHHHH
Q 019722          180 SWFSGDMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFF  259 (336)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~  259 (336)
                      .......          .....+..+|++||+|+.+|+++++.|+++.|  |+||+|+||+|+|+|....          
T Consensus       156 ~~~~~~~----------~~~~~~~~aY~aSKaal~~l~~~la~el~~~g--I~v~~i~PG~v~T~m~~~~----------  213 (250)
T d1yo6a1         156 SITDNTS----------GSAQFPVLAYRMSKAAINMFGRTLAVDLKDDN--VLVVNFCPGWVQTNLGGKN----------  213 (250)
T ss_dssp             CSTTCCS----------TTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGT--CEEEEEECCCC------------------
T ss_pred             cccCCcc----------cccchhHHHHHHHHHHHHHHHHHHHHHhcccC--eEEEEEecCCCCCCCCCCC----------
Confidence            5432110          01134456799999999999999999999988  9999999999999997642          


Q ss_pred             HHHhhcCChHHHHHHHHHHHhcCccccCCceeeccCcc
Q 019722          260 LTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNE  297 (336)
Q Consensus       260 ~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~  297 (336)
                          ...+|++.+..++..+..+. ...+|+||..++.
T Consensus       214 ----~~~~~e~~a~~~~~~~~~~~-~~~sG~f~~~~g~  246 (250)
T d1yo6a1         214 ----AALTVEQSTAELISSFNKLD-NSHNGRFFMRNLK  246 (250)
T ss_dssp             ---------HHHHHHHHHHHTTCC-GGGTTCEEETTEE
T ss_pred             ----CCCCHHHHHHHHHHHHhcCC-CCCCeEEECCCCe
Confidence                13468899999999987544 3469999987764

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=100.00  E-value=4.6e-38  Score=281.91  Aligned_cols=245  Identities=18%  Similarity=0.178  Sum_probs=192.4

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeC-ChHHHHHHHHHHHhhCCCCceEE-----------------EeccCCC
Q 019722           36 VTAIITGATSGIGAETARVLAKRGARLVLPAR-SLKAAEEAKARLASDCPGSDIVV-----------------LPLDLSS   97 (336)
Q Consensus        36 k~~lItGgs~gIG~aia~~L~~~G~~V~~~~r-~~~~~~~~~~~l~~~~~~~~~~~-----------------~~~Dl~~   97 (336)
                      .+||||||++|||+++|++|+++|++|++++| +.+.++++.+++....+. ....                 +.+|+++
T Consensus         3 pVAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~d~~~~~~~~~~~~~~~~dv~~   81 (284)
T d1e7wa_           3 PVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPN-SAITVQADLSNVATAPVSGADGSAPVTL   81 (284)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTT-CEEEEECCCSSSCBCCCC----CCCBCH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHhhcCC-ceEEEEeecccccccccccccccccCCC
Confidence            58999999999999999999999999999875 566677788888776533 4444                 4566999


Q ss_pred             HHHHHHHHHHHHhcCCCccEEEEcccCCCCC--CCCCchhh--------------hhHHHHHHhHHHHHHHHHHHHHHHh
Q 019722           98 LSSVRNFVSQFHSLNLPLNLLINNAGKFAHQ--HAISEDGI--------------EMTFATNYLGHFLLTKLLLKKMIET  161 (336)
Q Consensus        98 ~~~v~~~~~~~~~~~~~id~lv~nAg~~~~~--~~~~~~~~--------------~~~~~vn~~~~~~l~~~~~~~l~~~  161 (336)
                      .++++++++++.+.+|+||+||||||.....  .+.+.++|              ...+.+|+.++++++|.+.+.+...
T Consensus        82 ~~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~  161 (284)
T d1e7wa_          82 FTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGT  161 (284)
T ss_dssp             HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTS
T ss_pred             HHHHHHHHHHHHHHhCCCCEEEecCCccCCCchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeeccccchhhhh
Confidence            9999999999999999999999999976543  33333333              3578999999999999999987643


Q ss_pred             hc-cCCCCCeEEEEcCCccccccCCcccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCc
Q 019722          162 AK-ATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGI  240 (336)
Q Consensus       162 ~~-~~~~~grIV~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~  240 (336)
                      .. ..+..++||+++|.....+                 .+++.+|++||+++++|+|++++|+++.|  ||||+|+||+
T Consensus       162 ~~~~~~~~~~ii~~~s~~~~~~-----------------~~~~~~Y~asKaal~~lt~~lA~el~~~g--IrvN~I~PG~  222 (284)
T d1e7wa_         162 PAKHRGTNYSIINMVDAMTNQP-----------------LLGYTIYTMAKGALEGLTRSAALELAPLQ--IRVNGVGPGL  222 (284)
T ss_dssp             CGGGSCSCEEEEEECCTTTTSC-----------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEESS
T ss_pred             HHHhcCCCCcccccccccccCC-----------------ccceeeeccccccchhhhHHHHHHhCCcc--cccccccccc
Confidence            21 2233578999999887765                 67788999999999999999999999998  9999999998


Q ss_pred             eeCCCCCccchhHHHHHHHHHH-hhcCChHHHHHHHHHHHhcCccccCCceeeccCccccccc
Q 019722          241 VRTRLTREREGFITDLVFFLTS-KLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWTSK  302 (336)
Q Consensus       241 v~T~~~~~~~~~~~~~~~~~~~-~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~~~  302 (336)
                      +.+..... ...........+. .+..+|+|++.+++||++ +.++|+||+.+.+||+..+++
T Consensus       223 t~~~~~~~-~~~~~~~~~~~pl~~R~~~peeiA~~v~fL~S-~~s~~itG~~i~VDGG~sl~r  283 (284)
T d1e7wa_         223 SVLVDDMP-PAVWEGHRSKVPLYQRDSSAAEVSDVVIFLCS-SKAKYITGTCVKVDGGYSLTR  283 (284)
T ss_dssp             BCCGGGSC-HHHHHHHHTTCTTTTSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTGGGCC
T ss_pred             ccccccCC-HHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhC-chhcCccCCeEEECcChhccC
Confidence            65543222 2233333333333 677899999999999997 888999999999999876553

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=3.7e-38  Score=278.83  Aligned_cols=241  Identities=14%  Similarity=0.158  Sum_probs=202.5

Q ss_pred             CCCCCEEEEeCCCC--hHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           32 NLSSVTAIITGATS--GIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        32 ~l~gk~~lItGgs~--gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      -|+||++|||||++  |||+++|+.|+++|++|++++|+++..+.. +++...  ..+...+.+|+++..++...++++.
T Consensus         2 ~L~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~   78 (258)
T d1qsga_           2 FLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRV-EEFAAQ--LGSDIVLQCDVAEDASIDTMFAELG   78 (258)
T ss_dssp             TTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHH-HHHHHH--TTCCCEEECCTTCHHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHHHhh--cCCcceeecccchHHHHHHHHHHhh
Confidence            48999999999998  899999999999999999999996644443 444444  4567888999999999999999999


Q ss_pred             hcCCCccEEEEcccCCCCC-------CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccc
Q 019722          110 SLNLPLNLLINNAGKFAHQ-------HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWF  182 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~~~-------~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~  182 (336)
                      +.++++|++|+||+.....       .....+.|...+.+|+.+.+.+++++.+.+.+       ++.||++||..+..+
T Consensus        79 ~~~~~~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~Ii~iss~~~~~~  151 (258)
T d1qsga_          79 KVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNP-------GSALLTLSYLGAERA  151 (258)
T ss_dssp             TTCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE-------EEEEEEEECGGGTSB
T ss_pred             hcccccceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccC-------CcEEEEecchhhccC
Confidence            9999999999999875432       23455668889999999999999999998854       368999999877765


Q ss_pred             cCCcccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccch---hHHHHHHH
Q 019722          183 SGDMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREG---FITDLVFF  259 (336)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~---~~~~~~~~  259 (336)
                                       .+....|++||+++++|+|++++|++++|  ||||+|+||+|+|++......   ........
T Consensus       152 -----------------~~~~~~Y~~sKaal~~ltr~lA~el~~~g--IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~  212 (258)
T d1qsga_         152 -----------------IPNYNVMGLAKASLEANVRYMANAMGPEG--VRVNAISAGPIRTLAASGIKDFRKMLAHCEAV  212 (258)
T ss_dssp             -----------------CTTTTHHHHHHHHHHHHHHHHHHHHTTTT--EEEEEEEECCCCCTTGGGSTTHHHHHHHHHHH
T ss_pred             -----------------CCCcHHHHHHHHHHHHHHHHHHHHhCccC--ceeecccccccccccccccchhhhHHHHHHhC
Confidence                             67778899999999999999999999988  999999999999999876532   22333345


Q ss_pred             HHHhhcCChHHHHHHHHHHHhcCccccCCceeeccCccccccc
Q 019722          260 LTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWTSK  302 (336)
Q Consensus       260 ~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~~~  302 (336)
                      .+..+..+|+|++..++||++ +.++++||+.+.+||+.....
T Consensus       213 ~pl~R~~~peeia~~v~fL~s-~~s~~itG~~i~vDGG~~i~g  254 (258)
T d1qsga_         213 TPIRRTVTIEDVGNSAAFLCS-DLSAGISGEVVHVDGGFSIAA  254 (258)
T ss_dssp             STTSSCCCHHHHHHHHHHHTS-GGGTTCCSCEEEESTTGGGBC
T ss_pred             CCCCCCcCHHHHHHHHHHHhC-chhcCccCceEEECcCHHHhc
Confidence            556678999999999999997 788999999999999866543

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=100.00  E-value=1e-37  Score=278.39  Aligned_cols=261  Identities=15%  Similarity=0.106  Sum_probs=192.6

Q ss_pred             CCCCCEEEEeCCCC--hHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           32 NLSSVTAIITGATS--GIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        32 ~l~gk~~lItGgs~--gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      -|+||++|||||+|  |||+++|++|+++|++|++++|+++ +++..+++...  +....++++|++++.+++++++++.
T Consensus         2 ~L~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~-~~~~~~~l~~~--~~~~~~~~~d~~~~~~~~~~~~~~~   78 (274)
T d2pd4a1           2 FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-LEKRVRPIAQE--LNSPYVYELDVSKEEHFKSLYNSVK   78 (274)
T ss_dssp             TTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT-THHHHHHHHHH--TTCCCEEECCTTCHHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHHHhh--CCceeEeeecccchhhHHHHHHHHH
Confidence            47999999999865  9999999999999999999999954 44556666666  4567789999999999999999999


Q ss_pred             hcCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcc
Q 019722          110 SLNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMI  187 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~  187 (336)
                      +.++++|++|+|+|.....  .....+..+..+..+....+.........+.+...   ..+.|+++++.+....     
T Consensus        79 ~~~g~id~lV~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~i~~~s~~~~~~~-----  150 (274)
T d2pd4a1          79 KDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLN---NGASVLTLSYLGSTKY-----  150 (274)
T ss_dssp             HHTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEE---EEEEEEEEECGGGTSB-----
T ss_pred             HHcCCCCeEEeecccccccccccccccccchhhhhhhccccccccccccccccccc---cCcceeeecccccccc-----
Confidence            9999999999999976553  22222222333333333333333333333222211   1234555555444433     


Q ss_pred             cccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccch---hHHHHHHHHHHhh
Q 019722          188 RYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREG---FITDLVFFLTSKL  264 (336)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~---~~~~~~~~~~~~~  264 (336)
                                  .+....|+++|+++++++|+++.|+++.|  ||||+|+||++.|++......   .........+..+
T Consensus       151 ------------~~~~~~y~asK~al~~ltr~lA~e~~~~G--IrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r  216 (274)
T d2pd4a1         151 ------------MAHYNVMGLAKAALESAVRYLAVDLGKHH--IRVNALSAGPIRTLASSGIADFRMILKWNEINAPLRK  216 (274)
T ss_dssp             ------------CTTCHHHHHHHHHHHHHHHHHHHHHHTTT--CEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTSS
T ss_pred             ------------cccchhhhHHHHHHHHHHHhhHHHhcCcC--ceecccccCcccCccccccCchHHHHHHHhhhhhccC
Confidence                        56677899999999999999999999988  999999999999999877643   2222223445567


Q ss_pred             cCChHHHHHHHHHHHhcCccccCCceeeccCcccccccC---CCCHHHHHHHHHHHH
Q 019722          265 LKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWTSKL---GSNSNEASRLWAASE  318 (336)
Q Consensus       265 ~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~~~~---~~~~~~~~~~w~~~~  318 (336)
                      ..+|+|+|..++||++ +.+.++||+.|.+||+.....+   ..+++.+.++|+..+
T Consensus       217 ~~~pedIA~~v~fL~S-~~s~~itG~~i~vDGG~~~~g~~~~~~~~~~~~~~~~~~~  272 (274)
T d2pd4a1         217 NVSLEEVGNAGMYLLS-SLSSGVSGEVHFVDAGYHVMGMGAVEEKDNKATLLWDLHK  272 (274)
T ss_dssp             CCCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTGGGBSSCCCTTCTTTTCCHHHHSS
T ss_pred             CcCHHHHHHHHHHHhC-hhhCCCcCceEEECCChhhccCCcccccccchhhhhhhhc
Confidence            7899999999999998 7889999999999998655433   335677788997643

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=6.8e-38  Score=286.62  Aligned_cols=240  Identities=14%  Similarity=0.122  Sum_probs=190.3

Q ss_pred             CCCEEEEeC--CCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCC----------CceEEE----------
Q 019722           34 SSVTAIITG--ATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPG----------SDIVVL----------   91 (336)
Q Consensus        34 ~gk~~lItG--gs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~----------~~~~~~----------   91 (336)
                      .+|++||||  +++|||++||++|+++|++|++++++.................          ......          
T Consensus         1 n~kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (329)
T d1uh5a_           1 NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAN   80 (329)
T ss_dssp             CCCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHTTTTTGGGEETTTEECCEEEEEECCTTCSSGG
T ss_pred             CCcEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCchhhhhhhHHHHHHhhhhHHHHHHHhhhhhhhcccccceehhhc
Confidence            379999999  5589999999999999999999999877555444333222110          111222          


Q ss_pred             ----------eccCCCHHHHHHHHHHHHhcCCCccEEEEcccCCCC----CCCCCchhhhhHHHHHHhHHHHHHHHHHHH
Q 019722           92 ----------PLDLSSLSSVRNFVSQFHSLNLPLNLLINNAGKFAH----QHAISEDGIEMTFATNYLGHFLLTKLLLKK  157 (336)
Q Consensus        92 ----------~~Dl~~~~~v~~~~~~~~~~~~~id~lv~nAg~~~~----~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~  157 (336)
                                .+|+++..+++.+++++.+.+|+||+||||||....    ..+.+.++|++++++|+++.+.++|+++|+
T Consensus        81 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~k~~~~~  160 (329)
T d1uh5a_          81 DIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNI  160 (329)
T ss_dssp             GCCHHHHTSHHHHTCCCCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGG
T ss_pred             ccchhhhhhhhhhhhhHHHHHHHHHHHHHHhCCCCeeccccccccccCCChhhhhhhhhhhhcccchhHHHHHHHHHHhh
Confidence                      346778889999999999999999999999997543    256788999999999999999999999999


Q ss_pred             HHHhhccCCCCCeEEEEcCCccccccCCcccccccccCCCCCCCh-hhHhHHHHHHHHHHHHHHHHHHcc-CCCcEEEEE
Q 019722          158 MIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDA-TRAYALSKLANVLHTKELAQRLKQ-MEANVTVNC  235 (336)
Q Consensus       158 l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Y~~sK~a~~~l~~~la~e~~~-~g~~I~vn~  235 (336)
                      |++       .|+||++||.++..+                 .++ ...|+++|+++++|+|.|+.|+++ .|  ||||+
T Consensus       161 m~~-------~GsIv~iss~~~~~~-----------------~p~y~~~y~asKaal~~ltr~lA~Ela~~~g--IRVNa  214 (329)
T d1uh5a_         161 MKP-------QSSIISLTYHASQKV-----------------VPGYGGGMSSAKAALESDTRVLAYHLGRNYN--IRINT  214 (329)
T ss_dssp             EEE-------EEEEEEEECGGGTSC-----------------CTTCTTTHHHHHHHHHHHHHHHHHHHHHHHC--CEEEE
T ss_pred             ccc-------ccccccceeehhccc-----------------ccccchhhhhhhccccccchhhHHHHhcccC--cEEEE
Confidence            954       379999999877765                 444 346999999999999999999987 47  99999


Q ss_pred             eeCCceeCCCCCcc----------------------------------------------chhHHHHHHHHHHhhcCChH
Q 019722          236 VHPGIVRTRLTRER----------------------------------------------EGFITDLVFFLTSKLLKTIP  269 (336)
Q Consensus       236 v~PG~v~T~~~~~~----------------------------------------------~~~~~~~~~~~~~~~~~~~~  269 (336)
                      |+||+|+|+..+..                                              ...........+..+..+|+
T Consensus       215 I~PG~i~T~a~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~~~pe  294 (329)
T d1uh5a_         215 ISAGPLKSRAATAINKLNNTYENNTNQNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKYAPLRQKLLST  294 (329)
T ss_dssp             EEECCCCCTTGGGCC------------------------------------------CHHHHHHHHHHHHSSSCSCCCHH
T ss_pred             EecCcccchhhhcccchhhhhhhhhhhhhccccccccccccccccccchhhhhhhcccchHHHHHHHhccCCCCCCcCHH
Confidence            99999999533321                                              01222233344567788999


Q ss_pred             HHHHHHHHHHhcCccccCCceeeccCccccc
Q 019722          270 QGAATTCYVAIHPRLVNVSGKYFADCNEAWT  300 (336)
Q Consensus       270 ~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~  300 (336)
                      |++.+++||++ +.++|+||+.+.+||+...
T Consensus       295 dvA~~v~fLaS-d~s~~iTGq~i~VDGG~~~  324 (329)
T d1uh5a_         295 DIGSVASFLLS-RESRAITGQTIYVDNGLNI  324 (329)
T ss_dssp             HHHHHHHHHHS-GGGTTCCSCEEEESTTGGG
T ss_pred             HHHHHHHHHhC-chhCCccCCeEEECCCccc
Confidence            99999999997 8899999999999998654

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=100.00  E-value=3e-37  Score=278.42  Aligned_cols=247  Identities=16%  Similarity=0.102  Sum_probs=192.3

Q ss_pred             CCCCCCEEEEeCCCC--hHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCC---------Cc-eEEEecc----
Q 019722           31 PNLSSVTAIITGATS--GIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPG---------SD-IVVLPLD----   94 (336)
Q Consensus        31 ~~l~gk~~lItGgs~--gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~---------~~-~~~~~~D----   94 (336)
                      ++|+||++|||||++  |||+++|++|+++|++|++++|++................         .. -....+|    
T Consensus         4 ~~L~gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (297)
T d1d7oa_           4 IDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVFD   83 (297)
T ss_dssp             CCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTCC
T ss_pred             cCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCchhhhhhHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhhcc
Confidence            689999999999876  9999999999999999999999876544333322211100         01 1222333    


Q ss_pred             ----------------CCCHHHHHHHHHHHHhcCCCccEEEEcccCCCC----CCCCCchhhhhHHHHHHhHHHHHHHHH
Q 019722           95 ----------------LSSLSSVRNFVSQFHSLNLPLNLLINNAGKFAH----QHAISEDGIEMTFATNYLGHFLLTKLL  154 (336)
Q Consensus        95 ----------------l~~~~~v~~~~~~~~~~~~~id~lv~nAg~~~~----~~~~~~~~~~~~~~vn~~~~~~l~~~~  154 (336)
                                      .++..+++++++++.+.||+||+||||||....    ..+.+.++|++.+++|+.+.+.+++++
T Consensus        84 ~~~~~~~dv~~~~~~~~~~~~~~~~~~~~~~~~~G~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~  163 (297)
T d1d7oa_          84 NPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHF  163 (297)
T ss_dssp             SGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred             ccccchhhhhhhhhhhhccHHHHHHHHHHHHHHhCCCcccccccccccccccchhhhhcccccccccchhhhhhhhhhHH
Confidence                            345567789999999999999999999997532    267789999999999999999999999


Q ss_pred             HHHHHHhhccCCCCCeEEEEcCCccccccCCcccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHc-cCCCcEEE
Q 019722          155 LKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLK-QMEANVTV  233 (336)
Q Consensus       155 ~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~-~~g~~I~v  233 (336)
                      +|.+.++       ++++++++.......                .+....|+++|+++..+++.++.+++ +.|  |||
T Consensus       164 ~~~~~~~-------g~~~~~~~~~~~~~~----------------~~~~~~y~~aKaa~~~l~~~~a~e~~~~~g--Irv  218 (297)
T d1d7oa_         164 LPIMNPG-------GASISLTYIASERII----------------PGYGGGMSSAKAALESDTRVLAFEAGRKQN--IRV  218 (297)
T ss_dssp             GGGEEEE-------EEEEEEECGGGTSCC----------------TTCTTTHHHHHHHHHHHHHHHHHHHHHHHC--CEE
T ss_pred             HHHhhcC-------Ccceeeeehhhcccc----------------cccccceecccccccccccccchhccccce--EEe
Confidence            9988663       577777776544321                34556799999999999999999996 467  999


Q ss_pred             EEeeCCceeCCCCCccc---hhHHHHHHHHHHhhcCChHHHHHHHHHHHhcCccccCCceeeccCcccccccC
Q 019722          234 NCVHPGIVRTRLTRERE---GFITDLVFFLTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWTSKL  303 (336)
Q Consensus       234 n~v~PG~v~T~~~~~~~---~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~~~~  303 (336)
                      |+|+||++.|++.+...   +.........+..+..+|+|++..++||++ +.++|+||+.+.+||+......
T Consensus       219 N~I~PG~i~T~~~~~~~~~~~~~~~~~~~~PlgR~~~peevA~~v~fL~S-~~a~~itGq~i~vDGG~s~~G~  290 (297)
T d1d7oa_         219 NTISAGPLGSRAAKAIGFIDTMIEYSYNNAPIQKTLTADEVGNAAAFLVS-PLASAITGATIYVDNGLNSMGV  290 (297)
T ss_dssp             EEEEECCCBCCCSSCCSHHHHHHHHHHHHSSSCCCBCHHHHHHHHHHHTS-GGGTTCCSCEEEESTTGGGCSS
T ss_pred             cccccccccchhhhhccCCHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhC-chhcCCcCceEEECcCHhhcCC
Confidence            99999999999988753   233334444555677899999999999997 8899999999999998665543

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=100.00  E-value=5.8e-36  Score=265.52  Aligned_cols=244  Identities=18%  Similarity=0.163  Sum_probs=190.5

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHH-HHHHHHHHHhhCCCCceEEEeccCCC----HHHHHHHHHHHHh
Q 019722           36 VTAIITGATSGIGAETARVLAKRGARLVLPARSLKA-AEEAKARLASDCPGSDIVVLPLDLSS----LSSVRNFVSQFHS  110 (336)
Q Consensus        36 k~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~-~~~~~~~l~~~~~~~~~~~~~~Dl~~----~~~v~~~~~~~~~  110 (336)
                      .|||||||++|||+++|++|+++|++|++++|+.++ .+++.+++.+.. +.+...+++|..+    .+.+.++++++.+
T Consensus         2 ~vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (266)
T d1mxha_           2 PAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAAR-AGSAVLCKGDLSLSSSLLDCCEDIIDCSFR   80 (266)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHS-TTCEEEEECCCSSSTTHHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHHHhhc-CCceEEEecccccchhHHHHHHHHHHHHHH
Confidence            489999999999999999999999999999988654 567778887775 3466667665544    5677888888888


Q ss_pred             cCCCccEEEEcccCCCCCC-------------CCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCC
Q 019722          111 LNLPLNLLINNAGKFAHQH-------------AISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSS  177 (336)
Q Consensus       111 ~~~~id~lv~nAg~~~~~~-------------~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~  177 (336)
                      .+|++|++|||||+..+..             ......+...+.+|+.+.+...+...+.+..........+.++++++.
T Consensus        81 ~~g~iDilvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (266)
T d1mxha_          81 AFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDA  160 (266)
T ss_dssp             HHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEECCG
T ss_pred             HhCCCCEEEECCccCCCCcccccccccchhcccccccccccccccccccccchhhhhccccccccccccccccchhhhhc
Confidence            8999999999999765431             112334667888899999999998888876654433446788888888


Q ss_pred             ccccccCCcccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHHH
Q 019722          178 IHSWFSGDMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLV  257 (336)
Q Consensus       178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~  257 (336)
                      .+...                 .+++..|++||+++++|++.++++++++|  ||||+|+||+++|++... ........
T Consensus       161 ~~~~~-----------------~~~~~~Y~asKaal~~lt~~lA~e~~~~g--IrVN~I~PG~i~t~~~~~-~~~~~~~~  220 (266)
T d1mxha_         161 MTDLP-----------------LPGFCVYTMAKHALGGLTRAAALELAPRH--IRVNAVAPGLSLLPPAMP-QETQEEYR  220 (266)
T ss_dssp             GGGSC-----------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEESSBSCCSSSC-HHHHHHHH
T ss_pred             ccccc-----------------CcchhhhhhhHHHHhhhHHHHHHHhCccC--cEEEEeccCcEeccccCC-HHHHHHHH
Confidence            77665                 77899999999999999999999999988  999999999999997654 22233333


Q ss_pred             HHHHH-hhcCChHHHHHHHHHHHhcCccccCCceeeccCcccccc
Q 019722          258 FFLTS-KLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWTS  301 (336)
Q Consensus       258 ~~~~~-~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~~  301 (336)
                      ...+. ++..+|+|++.+++||++ +.+.|+||+.+.+||+..+.
T Consensus       221 ~~~pl~r~~~~peeva~~v~fL~s-~~s~~itG~~i~vDGG~~l~  264 (266)
T d1mxha_         221 RKVPLGQSEASAAQIADAIAFLVS-KDAGYITGTTLKVDGGLILA  264 (266)
T ss_dssp             TTCTTTSCCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTGGGC
T ss_pred             hcCCCCCCCCCHHHHHHHHHHHhC-chhCCccCCeEEECccHhhh
Confidence            33333 234799999999999998 88899999999999987654

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=5.4e-36  Score=261.92  Aligned_cols=229  Identities=24%  Similarity=0.205  Sum_probs=186.8

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCCC
Q 019722           35 SVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLP  114 (336)
Q Consensus        35 gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  114 (336)
                      .|+||||||++|||+++|++|+++|++|++++|+++              ..+....++|+++...+..+........ .
T Consensus         1 DK~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~--------------~~~~~~~~~d~~~~~~~~~~~~~~~~~~-~   65 (241)
T d1uaya_           1 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE--------------GEDLIYVEGDVTREEDVRRAVARAQEEA-P   65 (241)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC--------------SSSSEEEECCTTCHHHHHHHHHHHHHHS-C
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcc--------------cccceEeeccccchhhhHHHHHhhhccc-c
Confidence            499999999999999999999999999999999854              3577889999999999999888876654 4


Q ss_pred             ccEEEEcccCCCCC------CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhc-cCCCCCeEEEEcCCccccccCCcc
Q 019722          115 LNLLINNAGKFAHQ------HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAK-ATGIQGRIVNVSSSIHSWFSGDMI  187 (336)
Q Consensus       115 id~lv~nAg~~~~~------~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~-~~~~~grIV~vsS~~~~~~~~~~~  187 (336)
                      .+.++.+++.....      ...+.+.|++.+++|+.+.+.+++.+.+.+.+... .....|+||++||..+..+     
T Consensus        66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~-----  140 (241)
T d1uaya_          66 LFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEG-----  140 (241)
T ss_dssp             EEEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHC-----
T ss_pred             ccchhhhhhccccccccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCceeeeeecchhhccC-----
Confidence            55666666643321      34566789999999999999999999999755321 1123689999999998877     


Q ss_pred             cccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHH-HHHHHH-hhc
Q 019722          188 RYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDL-VFFLTS-KLL  265 (336)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~-~~~~~~-~~~  265 (336)
                                  .+++..|+++|+++++|+|+++.|+++.|  ||||+|+||+|+|++........... ....+. .+.
T Consensus       141 ------------~~~~~~Y~asKaal~~lt~~lA~ela~~g--IrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~R~  206 (241)
T d1uaya_         141 ------------QIGQAAYAASKGGVVALTLPAARELAGWG--IRVVTVAPGLFDTPLLQGLPEKAKASLAAQVPFPPRL  206 (241)
T ss_dssp             ------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGT--EEEEEEEECSCSSHHHHTSCHHHHHHHHTTCCSSCSC
T ss_pred             ------------CCCchhhHHHHHHHHHHHHHHHHHHhhcC--CceeeecCCcccccccchhhhhHHHHHHhcCCCCCCC
Confidence                        77888999999999999999999999988  99999999999999987764332222 222222 567


Q ss_pred             CChHHHHHHHHHHHhcCccccCCceeeccCccccc
Q 019722          266 KTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWT  300 (336)
Q Consensus       266 ~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~  300 (336)
                      .+|+|+|..++||++   .+|+||+.+.+||+...
T Consensus       207 g~pedvA~~v~fL~s---~~~iTG~~i~VDGG~~m  238 (241)
T d1uaya_         207 GRPEEYAALVLHILE---NPMLNGEVVRLDGALRM  238 (241)
T ss_dssp             CCHHHHHHHHHHHHH---CTTCCSCEEEESTTCCC
T ss_pred             cCHHHHHHHHHHHHh---CCCCCCCEEEECCcccC
Confidence            899999999999997   36899999999998654

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=6.9e-37  Score=267.10  Aligned_cols=217  Identities=12%  Similarity=0.067  Sum_probs=178.0

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhc--
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSL--  111 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~--  111 (336)
                      +||++|||||++|||+++|++|+++|++|++++++....            ......+.+|.++.++++.+.+.+.+.  
T Consensus         1 egK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   68 (236)
T d1dhra_           1 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEE------------ASASVIVKMTDSFTEQADQVTAEVGKLLG   68 (236)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTT------------SSEEEECCCCSCHHHHHHHHHHHHHHHHT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccc------------ccccceeecccCcHHHHHHHHHHHHHHhC
Confidence            589999999999999999999999999999999875421            245667788888888988888887665  


Q ss_pred             CCCccEEEEcccCCCCC---CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccc
Q 019722          112 NLPLNLLINNAGKFAHQ---HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIR  188 (336)
Q Consensus       112 ~~~id~lv~nAg~~~~~---~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~  188 (336)
                      .+++|+||||||.....   .+.+.++|++++++|+.+.+.++++++|+|++       +|+||++||.++..+      
T Consensus        69 ~~~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~-------~G~Iv~isS~~~~~~------  135 (236)
T d1dhra_          69 DQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKE-------GGLLTLAGAKAALDG------  135 (236)
T ss_dssp             TCCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE-------EEEEEEECCGGGGSC------
T ss_pred             CCCceEEEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhccc-------ccceeEEccHHHcCC------
Confidence            35799999999965432   45567889999999999999999999999954       389999999988776      


Q ss_pred             ccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHHHHHHHHhhcCCh
Q 019722          189 YLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSKLLKTI  268 (336)
Q Consensus       189 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~  268 (336)
                                 .+.+.+|++||+|+++|+++|+.|++....+||||+|+||+++|+|.+....       .........|
T Consensus       136 -----------~~~~~~Y~asKaal~~lt~~la~El~~~~~gI~vn~v~PG~v~T~~~~~~~~-------~~~~~~~~~p  197 (236)
T d1dhra_         136 -----------TPGMIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNRKSMP-------EADFSSWTPL  197 (236)
T ss_dssp             -----------CTTBHHHHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHHHHHHST-------TSCGGGSEEH
T ss_pred             -----------ccCCcccHHHHHHHHHHHHHHHHHhccCCCcEEEEEEEeccCcCCcchhhCc-------cchhhcCCCH
Confidence                       7788899999999999999999999843234999999999999998654211       0112334568


Q ss_pred             HHHHHHHHHHHhcCccccCCceeecc
Q 019722          269 PQGAATTCYVAIHPRLVNVSGKYFAD  294 (336)
Q Consensus       269 ~~~a~~~~~l~~~~~~~~~~G~~~~~  294 (336)
                      ++++..++++++ +...+++|..+.+
T Consensus       198 e~va~~~~~l~s-~~~~~i~G~~i~v  222 (236)
T d1dhra_         198 EFLVETFHDWIT-GNKRPNSGSLIQV  222 (236)
T ss_dssp             HHHHHHHHHHHT-TTTCCCTTCEEEE
T ss_pred             HHHHHHHHHHhC-CCccCCCCCeEEE
Confidence            899999999987 7778899986644

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=3.1e-36  Score=262.85  Aligned_cols=217  Identities=13%  Similarity=0.069  Sum_probs=178.2

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHh--cC
Q 019722           35 SVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHS--LN  112 (336)
Q Consensus        35 gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~--~~  112 (336)
                      +++||||||++|||+++|++|+++|++|++++|++...            ......+.+|+.+.+......+.+..  .+
T Consensus         2 ~gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   69 (235)
T d1ooea_           2 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQ------------ADSNILVDGNKNWTEQEQSILEQTASSLQG   69 (235)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTT------------SSEEEECCTTSCHHHHHHHHHHHHHHHHTT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCchhc------------ccccceeccccCchhHHHHHHHHHHHHhcC
Confidence            34569999999999999999999999999999986521            23556677899888888877777665  46


Q ss_pred             CCccEEEEcccCCCCC---CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcccc
Q 019722          113 LPLNLLINNAGKFAHQ---HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRY  189 (336)
Q Consensus       113 ~~id~lv~nAg~~~~~---~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~  189 (336)
                      ++||+||||||.....   .+.+.+.|+.++++|+.+.+.++|+++|+|++       +|+||++||..+..+       
T Consensus        70 g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~-------~g~Iv~isS~~~~~~-------  135 (235)
T d1ooea_          70 SQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKP-------GGLLQLTGAAAAMGP-------  135 (235)
T ss_dssp             CCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE-------EEEEEEECCGGGGSC-------
T ss_pred             CCeeEEEECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhccccccc-------ceEEEEeccHHhcCC-------
Confidence            8999999999975432   34445789999999999999999999999964       379999999988776       


Q ss_pred             cccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHHHHHHHHhhcCChH
Q 019722          190 LGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSKLLKTIP  269 (336)
Q Consensus       190 ~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~  269 (336)
                                .+++.+|++||+|+++|+++|+.|++..+.+|+||+|+||+++|++.+....       ........+|+
T Consensus       136 ----------~~~~~~Y~asKaal~~l~~~la~e~~~~~~~i~v~~i~Pg~~~T~~~~~~~~-------~~~~~~~~~~~  198 (235)
T d1ooea_         136 ----------TPSMIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNRKWMP-------NADHSSWTPLS  198 (235)
T ss_dssp             ----------CTTBHHHHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHHHHHHST-------TCCGGGCBCHH
T ss_pred             ----------cccccchHHHHHHHHHHHHHHHHHhccCCCceEEEEEecCcCcCcchhhhCc-------CCccccCCCHH
Confidence                      7788999999999999999999999865556999999999999998654211       11123455789


Q ss_pred             HHHHHHHHHHhcCccccCCceeecc
Q 019722          270 QGAATTCYVAIHPRLVNVSGKYFAD  294 (336)
Q Consensus       270 ~~a~~~~~l~~~~~~~~~~G~~~~~  294 (336)
                      +++..+++++.++....++|+.+.+
T Consensus       199 ~va~~~~~~l~~~~~~~~tG~~i~v  223 (235)
T d1ooea_         199 FISEHLLKWTTETSSRPSSGALLKI  223 (235)
T ss_dssp             HHHHHHHHHHHCGGGCCCTTCEEEE
T ss_pred             HHHHHHHHHhcCccccCCCceEEEE
Confidence            9999999888878888899998876

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=100.00  E-value=2.5e-35  Score=261.78  Aligned_cols=238  Identities=18%  Similarity=0.106  Sum_probs=186.5

Q ss_pred             CCCCCEEEEeCC--CChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           32 NLSSVTAIITGA--TSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        32 ~l~gk~~lItGg--s~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      -|+||++|||||  ++|||+++|++|+++|++|++++|+.++..+   ++.++. +.+...++||+++++++..+++.+.
T Consensus         3 ~l~gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~~---~~~~~~-~~~~~~~~~dv~~~~~~~~~~~~v~   78 (268)
T d2h7ma1           3 LLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQ---RITDRL-PAKAPLLELDVQNEEHLASLAGRVT   78 (268)
T ss_dssp             TTTTCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHHH---HHHTTS-SSCCCEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHHH---HHHHHc-CCceeeEeeecccccccccccchhh
Confidence            489999999994  5799999999999999999999999876543   333332 5678889999999999999999987


Q ss_pred             hc---CCCccEEEEcccCCCCC-------CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCcc
Q 019722          110 SL---NLPLNLLINNAGKFAHQ-------HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIH  179 (336)
Q Consensus       110 ~~---~~~id~lv~nAg~~~~~-------~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~  179 (336)
                      +.   ++.+|+++||||+....       .+.+.+.|...+.+|+.+.+...+...+.+..        +.+++++|...
T Consensus        79 ~~~~~~~~ld~~i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~i~~~s~~~  150 (268)
T d2h7ma1          79 EAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNP--------GGSIVGMDFDP  150 (268)
T ss_dssp             HHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--------EEEEEEEECCC
T ss_pred             hccccCCCcceeeecccccCccccccccccccchhhhhhhhhhhhhHHHHHHHHHhhhccc--------ccccccccccc
Confidence            64   57799999999975422       34566788889999999999888888776432        34455555444


Q ss_pred             ccccCCcccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccc-----hhH-
Q 019722          180 SWFSGDMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRERE-----GFI-  253 (336)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~-----~~~-  253 (336)
                      ...                 .+.+..|+++|+++++|+|++++|+++.|  ||||+|+||+|+|++.+...     ... 
T Consensus       151 ~~~-----------------~p~~~~y~~sK~a~~~ltr~lA~e~~~~g--IrVN~V~PG~v~T~~~~~~~~~~~~~~~~  211 (268)
T d2h7ma1         151 SRA-----------------MPAYNWMTVAKSALESVNRFVAREAGKYG--VRSNLVAAGPIRTLAMSAIVGGALGEEAG  211 (268)
T ss_dssp             SSC-----------------CTTTHHHHHHHHHHHHHHHHHHHHHHTTT--CEEEEEEECCCCCHHHHHHHTTTTCHHHH
T ss_pred             ccc-----------------CcccchhhccccchhhccccchhhhhccC--CcceEEecCCCCChhhhhhccchhhhhhc
Confidence            443                 67788999999999999999999999988  99999999999999865431     111 


Q ss_pred             ---HHHHHH----HHH-hhcCChHHHHHHHHHHHhcCccccCCceeeccCcccccc
Q 019722          254 ---TDLVFF----LTS-KLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWTS  301 (336)
Q Consensus       254 ---~~~~~~----~~~-~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~~  301 (336)
                         ......    .+. .+...|+|++..++||++ +.+.++||+.+.+||+...+
T Consensus       212 ~~~~~~~~~~~~~~pl~rr~~~p~dva~~v~fL~S-d~a~~iTG~~i~vDGG~~~~  266 (268)
T d2h7ma1         212 AQIQLLEEGWDQRAPIGWNMKDATPVAKTVCALLS-DWLPATTGDIIYADGGAHTQ  266 (268)
T ss_dssp             HHHHHHHHHHHHHCTTCCCTTCCHHHHHHHHHHHS-SSCTTCCSEEEEESTTGGGC
T ss_pred             cchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhC-chhcCccCCEEEECcCcccc
Confidence               111111    112 236789999999999996 88999999999999986543

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=99.97  E-value=1.8e-31  Score=235.19  Aligned_cols=231  Identities=19%  Similarity=0.178  Sum_probs=165.5

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhc-CCC
Q 019722           36 VTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSL-NLP  114 (336)
Q Consensus        36 k~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~-~~~  114 (336)
                      |+||||||++|||+++|++|+++|++|++++|+..+                   ..+|+.+....+.....+... .+.
T Consensus         2 kVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~~~-------------------~~~d~~~~~~~~~~~~~~~~~~~~~   62 (257)
T d1fjha_           2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAE-------------------VIADLSTAEGRKQAIADVLAKCSKG   62 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSS-------------------EECCTTSHHHHHHHHHHHHTTCTTC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECChHH-------------------HHHHhcCHHHHHHHHHHHHHHhCCC
Confidence            899999999999999999999999999999987431                   357999999988876665544 568


Q ss_pred             ccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcccccccc-
Q 019722          115 LNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQI-  193 (336)
Q Consensus       115 id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~~~-  193 (336)
                      +|++|+|||+..     ..+.+.....+|+.+...+.+...+.+.+..     ...+.++++................. 
T Consensus        63 id~lv~~Ag~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~  132 (257)
T d1fjha_          63 MDGLVLCAGLGP-----QTKVLGNVVSVNYFGATELMDAFLPALKKGH-----QPAAVVISSVASAHLAFDKNPLALALE  132 (257)
T ss_dssp             CSEEEECCCCCT-----TCSSHHHHHHHHTHHHHHHHHHHHHHHHTSS-----SCEEEEECCGGGGSSCGGGCTTHHHHH
T ss_pred             CcEEEEcCCCCC-----cHHHHHHHHHHHHHHHHHHHHHhhhhhhhhc-----cCcceeeeeccccchhhhhhhhhhhcc
Confidence            999999999753     3456788899999999999999999987754     35666666643332110000000000 


Q ss_pred             ----------cCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccch---hHHHHHHH-
Q 019722          194 ----------SRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREG---FITDLVFF-  259 (336)
Q Consensus       194 ----------~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~---~~~~~~~~-  259 (336)
                                .......++..+|++||+++++|+|+++.|+++.|  ||||+|+||+++|++.+....   ......+. 
T Consensus       133 ~g~~~~i~s~~~~~~~~~~~~~Y~asKaal~~ltr~lA~el~~~g--IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~  210 (257)
T d1fjha_         133 AGEEAKARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAG--VRLNTIAPGATETPLLQAGLQDPRYGESIAKFV  210 (257)
T ss_dssp             HTCHHHHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTT--CEEEEEEECC---------------------CC
T ss_pred             CCcEEEEeeehhccCCCcchHHHHHHhhhhhcccccccccccccc--ccccccccCCcCChhHHhhcCCHHHHHHHHhcC
Confidence                      00001134566799999999999999999999988  999999999999999876422   11111121 


Q ss_pred             HHHhhcCChHHHHHHHHHHHhcCccccCCceeeccCccc
Q 019722          260 LTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEA  298 (336)
Q Consensus       260 ~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  298 (336)
                      .+..+..+|+|++..++||++ +.++|+||+.+.+||+.
T Consensus       211 ~PlgR~g~p~eva~~v~fL~S-~~s~~itG~~i~vDGG~  248 (257)
T d1fjha_         211 PPMGRRAEPSEMASVIAFLMS-PAASYVHGAQIVIDGGI  248 (257)
T ss_dssp             CSTTSCCCTHHHHHHHHHHTS-GGGTTCCSCEEEESTTH
T ss_pred             CCCCCCcCHHHHHHHHHHHhC-chhCCccCceEEeCCCc
Confidence            256778899999999999987 88899999999999984

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=99.95  E-value=1e-28  Score=217.90  Aligned_cols=210  Identities=21%  Similarity=0.197  Sum_probs=161.3

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCCh---HHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHh
Q 019722           35 SVTAIITGATSGIGAETARVLAKRGA-RLVLPARSL---KAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHS  110 (336)
Q Consensus        35 gk~~lItGgs~gIG~aia~~L~~~G~-~V~~~~r~~---~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  110 (336)
                      ++|+|||||++|||+++|++|+++|+ +|++++|+.   +..++..++++..  +.++.++.||++|+++++++++.+.+
T Consensus         9 ~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~--g~~v~~~~~Dv~d~~~~~~~~~~i~~   86 (259)
T d2fr1a1           9 TGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEAL--GARTTVAACDVTDRESVRELLGGIGD   86 (259)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHT--TCEEEEEECCTTCHHHHHHHHHTSCT
T ss_pred             cCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhc--cccccccccccchHHHHHHhhccccc
Confidence            36999999999999999999999998 799999974   3456666677654  67999999999999999999998765


Q ss_pred             cCCCccEEEEcccCCCCC--CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccc
Q 019722          111 LNLPLNLLINNAGKFAHQ--HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIR  188 (336)
Q Consensus       111 ~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~  188 (336)
                      . +++|.+|||+|.....  .+.+.++|+.++++|+.+.+.+.+.+.+    ..     .++||++||.++..+      
T Consensus        87 ~-~~i~~vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~----~~-----~~~iv~~SS~a~~~g------  150 (259)
T d2fr1a1          87 D-VPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRE----LD-----LTAFVLFSSFASAFG------  150 (259)
T ss_dssp             T-SCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTT----SC-----CSEEEEEEEHHHHTC------
T ss_pred             c-ccccccccccccccccccccccHHHHHHHhhhhccchhHHHHHhhc----cC-----CceEeeecchhhccC------
Confidence            4 5899999999987654  6778899999999999999988775433    22     579999999998887      


Q ss_pred             ccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCC-CCCccchhHHHHHHHHHHhhcCC
Q 019722          189 YLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTR-LTREREGFITDLVFFLTSKLLKT  267 (336)
Q Consensus       189 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~-~~~~~~~~~~~~~~~~~~~~~~~  267 (336)
                                 .+++..|+++|++++.|++.++    ..|  +++++|+||.+.+. |....   ....... ......+
T Consensus       151 -----------~~~~~~YaAaka~l~~la~~~~----~~G--i~v~~I~pg~~~~~g~~~~~---~~~~~~~-~G~~~~~  209 (259)
T d2fr1a1         151 -----------APGLGGYAPGNAYLDGLAQQRR----SDG--LPATAVAWGTWAGSGMAEGP---VADRFRR-HGVIEMP  209 (259)
T ss_dssp             -----------CTTCTTTHHHHHHHHHHHHHHH----HTT--CCCEEEEECCBC---------------CTT-TTEECBC
T ss_pred             -----------CcccHHHHHHHHhHHHHHHHHH----hCC--CCEEECCCCcccCCccccch---HHHHHHh-cCCCCCC
Confidence                       7778899999999998876655    446  99999999988644 33221   1111000 0112346


Q ss_pred             hHHHHHHHHHHHhcCc
Q 019722          268 IPQGAATTCYVAIHPR  283 (336)
Q Consensus       268 ~~~~a~~~~~l~~~~~  283 (336)
                      +++++..+..++..+.
T Consensus       210 ~~~~~~~l~~~l~~~~  225 (259)
T d2fr1a1         210 PETACRALQNALDRAE  225 (259)
T ss_dssp             HHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHhCCC
Confidence            8888888888887543

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=99.81  E-value=1.4e-18  Score=159.20  Aligned_cols=248  Identities=15%  Similarity=0.036  Sum_probs=161.7

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHH-----HHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHh
Q 019722           36 VTAIITGATSGIGAETARVLAKRGARLVLPARSLKA-----AEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHS  110 (336)
Q Consensus        36 k~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~-----~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  110 (336)
                      |+||||||||.||.+++++|+++|++|+.++|....     .+........  ...++.++++|++|.+++.++++..  
T Consensus         2 K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~~~--   77 (357)
T d1db3a_           2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHT--CNPKFHLHYGDLSDTSNLTRILREV--   77 (357)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC-----------------------CCEEECCCCSSCHHHHHHHHHHH--
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHHhhhhh--cCCCeEEEEeecCCHHHHHHHHhcc--
Confidence            899999999999999999999999999999986432     2222221111  1468999999999999999999865  


Q ss_pred             cCCCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccccc
Q 019722          111 LNLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYL  190 (336)
Q Consensus       111 ~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~  190 (336)
                         .+|+++|+|+......  ..++.+..+++|+.|+..+++++...-.+.      ..|+|++||.. .++.+...+.+
T Consensus        78 ---~~d~v~h~aa~~~~~~--~~~~~~~~~~~Nv~gt~nllea~~~~~~~~------~~r~i~~SS~~-vYG~~~~~~~~  145 (357)
T d1db3a_          78 ---QPDEVYNLGAMSHVAV--SFESPEYTADVDAMGTLRLLEAIRFLGLEK------KTRFYQASTSE-LYGLVQEIPQK  145 (357)
T ss_dssp             ---CCSEEEECCCCCTTTT--TTSCHHHHHHHHTHHHHHHHHHHHHTTCTT------TCEEEEEEEGG-GGTTCCSSSBC
T ss_pred             ---CCCEEEEeecccccch--hhhCHHHHHHHHHHHHHHHHHHHHHhCCCC------CcEEEEEEchh-hhCCCCCCCcC
Confidence               6899999999765432  345667789999999999998876543222      25899999854 34332222222


Q ss_pred             ccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccc--hhHHHHHHHHHHhh----
Q 019722          191 GQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRERE--GFITDLVFFLTSKL----  264 (336)
Q Consensus       191 ~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~--~~~~~~~~~~~~~~----  264 (336)
                           ++....+...|+.||.+.+.+++.+++.+.     +.+..+.|+.+.+|......  ..............    
T Consensus       146 -----E~~~~~P~~~Y~~sK~~~E~~~~~~~~~~~-----l~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~  215 (357)
T d1db3a_         146 -----ETTPFYPRSPYAVAKLYAYWITVNYRESYG-----MYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCL  215 (357)
T ss_dssp             -----TTSCCCCCSHHHHHHHHHHHHHHHHHHHHC-----CCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCE
T ss_pred             -----CCCCCCCCChHHHHHHHHHHHHHHHHHHhC-----CCEEEEEeccccCCCCCcCCCchHHHHHHHHHHhCCCceE
Confidence                 222233456799999999999999988753     88899999999998644321  12222222211110    


Q ss_pred             ----------cCChHHHHHHHHHHHhcCccccCCceeeccCcccccccCCCCHHHHHHHHHHHHHhhc
Q 019722          265 ----------LKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWTSKLGSNSNEASRLWAASELLVS  322 (336)
Q Consensus       265 ----------~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~  322 (336)
                                ....+|.+.+++.++..+     .|..|+...+...+-        .++.+.+...++
T Consensus       216 ~~g~~~~~r~~~~v~D~~~a~~~~~~~~-----~~~~yni~sg~~~s~--------~~~~~~~~~~~g  270 (357)
T d1db3a_         216 YLGNMDSLRDWGHAKDYVKMQWMMLQQE-----QPEDFVIATGVQYSV--------RQFVEMAAAQLG  270 (357)
T ss_dssp             EESCTTCEECCEEHHHHHHHHHHTTSSS-----SCCCEEECCCCCEEH--------HHHHHHHHHTTT
T ss_pred             EECCCCeeecceeechHHHHHHHHHhCC-----CCCeEEECCCCceeh--------HHHHHHHHHHhC
Confidence                      123577788877766432     344444444444442        555566666655

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=99.77  E-value=2.3e-20  Score=156.33  Aligned_cols=113  Identities=16%  Similarity=0.177  Sum_probs=95.9

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      ..||+||++|||||++|||+++++.|+++|++|++++|+.+++++..+++...   .++.+..+|+++.+++.+++    
T Consensus        18 ~~~l~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~d~~~~~~~~~~~----   90 (191)
T d1luaa1          18 GGSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKR---FKVNVTAAETADDASRAEAV----   90 (191)
T ss_dssp             TSCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHH---HTCCCEEEECCSHHHHHHHT----
T ss_pred             CCCCCCCEEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHHHHhc---cchhhhhhhcccHHHHHHHh----
Confidence            56899999999999999999999999999999999999999999998888764   35667889999999887765    


Q ss_pred             hcCCCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHH
Q 019722          110 SLNLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLL  154 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~  154 (336)
                         +++|+||||||+..  ...+.+.|+..+++|+.+.+.....+
T Consensus        91 ---~~iDilin~Ag~g~--~~~~~e~~~~~~~~nv~~~~~~~~~~  130 (191)
T d1luaa1          91 ---KGAHFVFTAGAIGL--ELLPQAAWQNESSIEIVADYNAQPPL  130 (191)
T ss_dssp             ---TTCSEEEECCCTTC--CCBCHHHHHTCTTCCEEEECCCSSSC
T ss_pred             ---cCcCeeeecCcccc--ccCCHHHHHhhhcceeehhHhhHHHH
Confidence               47999999999643  34578889999999887777655443

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=99.77  E-value=5.4e-17  Score=147.56  Aligned_cols=237  Identities=14%  Similarity=0.099  Sum_probs=158.7

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCC
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNL  113 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  113 (336)
                      +||+||||||+|.||.+++++|+++|++|+.+.|+.++...+...............+..|+++..++..++.       
T Consensus        10 ~gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   82 (342)
T d1y1pa1          10 EGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIK-------   82 (342)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTT-------
T ss_pred             CcCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHHHhhhccccccccEEEeccccchhhhhhhcc-------
Confidence            4999999999999999999999999999999999988776655544444445556678899999987766553       


Q ss_pred             CccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCC---ccccc
Q 019722          114 PLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGD---MIRYL  190 (336)
Q Consensus       114 ~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~---~~~~~  190 (336)
                      ..|+++|+|+.....     ......+..|+.|+..+++.+...-   .     -.++|++||......+..   .....
T Consensus        83 ~~~~v~~~a~~~~~~-----~~~~~~~~~nv~gt~~ll~~~~~~~---~-----v~~~i~~SS~~~~~~~~~~~~~~~~~  149 (342)
T d1y1pa1          83 GAAGVAHIASVVSFS-----NKYDEVVTPAIGGTLNALRAAAATP---S-----VKRFVLTSSTVSALIPKPNVEGIYLD  149 (342)
T ss_dssp             TCSEEEECCCCCSCC-----SCHHHHHHHHHHHHHHHHHHHHTCT---T-----CCEEEEECCGGGTCCCCTTCCCCEEC
T ss_pred             cchhhhhhccccccc-----ccccccccchhhhHHHHHHhhhccc---c-----cccccccccceeeccCCCCCCCcccc
Confidence            689999999965422     2345677889999888888765531   1     259999999754432111   00000


Q ss_pred             cc-----------ccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCcc--chhHHHHH
Q 019722          191 GQ-----------ISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRER--EGFITDLV  257 (336)
Q Consensus       191 ~~-----------~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~--~~~~~~~~  257 (336)
                      +.           .............|+.+|.+.+.+++.+++....   ++++..|+|+.+..+.....  ........
T Consensus       150 e~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~---~~~~~~i~p~~v~Gp~~~~~~~~~~~~~~~  226 (342)
T d1y1pa1         150 EKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENKP---HFTLNAVLPNYTIGTIFDPETQSGSTSGWM  226 (342)
T ss_dssp             TTCCCHHHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCC---SSEEEEEEESEEECCCSCTTTCCCHHHHHH
T ss_pred             ccccccccccccccccccCCCCCcCcccchhHhHHHHHHHhhhhccc---ccccceecccceeCCCCCccccccchHHHH
Confidence            00           0112222445678999999999999999887643   38999999999988754322  12222222


Q ss_pred             HHHHHhh------------cCChHHHHHHHHHHHhcCccccCCceeeccCc
Q 019722          258 FFLTSKL------------LKTIPQGAATTCYVAIHPRLVNVSGKYFADCN  296 (336)
Q Consensus       258 ~~~~~~~------------~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~  296 (336)
                      ..+....            ...+.|.|.+.+.++..+..   .|.++...+
T Consensus       227 ~~l~~g~~~~~~~~~~~~~~v~v~Dva~~~i~~l~~~~~---~g~~~~~~~  274 (342)
T d1y1pa1         227 MSLFNGEVSPALALMPPQYYVSAVDIGLLHLGCLVLPQI---ERRRVYGTA  274 (342)
T ss_dssp             HHHHTTCCCHHHHTCCSEEEEEHHHHHHHHHHHHHCTTC---CSCEEEECC
T ss_pred             HHHHcCCcCcccCCccceeeeeHHHHHHHHHHhhcCccc---cceEEEEcC
Confidence            2221111            23457888887777765543   565554433

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=99.73  E-value=6.8e-17  Score=146.61  Aligned_cols=261  Identities=11%  Similarity=0.023  Sum_probs=165.1

Q ss_pred             EEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCCCcc
Q 019722           37 TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLPLN  116 (336)
Q Consensus        37 ~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id  116 (336)
                      .+|||||+|.||.+++++|+++|++|++++|............+... ..++.++++|++|.+.+.++++..     ++|
T Consensus         2 KiLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~d~~~l~~~~~~~-----~~d   75 (338)
T d1udca_           2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLG-GKHPTFVEGDIRNEALMTEILHDH-----AID   75 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHH-TSCCEEEECCTTCHHHHHHHHHHT-----TCS
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHhhc-CCCCEEEEeecCCHHHHHHHHhcc-----CCC
Confidence            39999999999999999999999999998763221111111111111 458999999999999999888753     689


Q ss_pred             EEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcccccccccCC
Q 019722          117 LLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRN  196 (336)
Q Consensus       117 ~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~~~~~~  196 (336)
                      +|||+|+.....  .+.++.++.+++|+.|+..+++++...-         -.++|++||...... .....    ..+.
T Consensus        76 ~ViHlAa~~~~~--~~~~~~~~~~~~Nv~gt~nlL~~~~~~~---------v~~~i~~Ss~~vy~~-~~~~~----~~e~  139 (338)
T d1udca_          76 TVIHFAGLKAVG--ESVQKPLEYYDNNVNGTLRLISAMRAAN---------VKNFIFSSSATVYGD-QPKIP----YVES  139 (338)
T ss_dssp             EEEECCSCCCHH--HHHHCHHHHHHHHHHHHHHHHHHHHHHT---------CCEEEEEEEGGGGCS-CCSSS----BCTT
T ss_pred             EEEECCCccchh--hHHhCHHHHHHhHHHHHHHHHHHHHHhC---------CCEEEecCcceEEcc-ccccc----cccc
Confidence            999999964321  2334556889999999999988887652         248888888654322 11111    1111


Q ss_pred             CCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCcc---------chhHHHHHHHHHHhh---
Q 019722          197 KSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRER---------EGFITDLVFFLTSKL---  264 (336)
Q Consensus       197 ~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~---------~~~~~~~~~~~~~~~---  264 (336)
                      .....+...|+.+|.+.+.+++....+..  +  +.+..++|+.+.++.....         ....+..........   
T Consensus       140 ~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~--~--~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i  215 (338)
T d1udca_         140 FPTGTPQSPYGKSKLMVEQILTDLQKAQP--D--WSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSL  215 (338)
T ss_dssp             SCCCCCSSHHHHHHHHHHHHHHHHHHHST--T--CEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHTTSSSCE
T ss_pred             cccCCCcchHHHHHhhhhHHHHHHHhhcc--C--CeEEEEeeccEEeccCCCCCCCCccccHHHHHHHHHHHHhcCCCCE
Confidence            11234566799999999999998877643  3  8888999999987643311         112222222211110   


Q ss_pred             -----------------cCChHHHHHHHHHHHhcCccccCCceeeccCcccccccCCCCHHHHHHHHHHHHHhhccCCCC
Q 019722          265 -----------------LKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWTSKLGSNSNEASRLWAASELLVSRDPKS  327 (336)
Q Consensus       265 -----------------~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~  327 (336)
                                       ....++.+.+......... ....+..|+..+....+-        .++.+.+.++++.....
T Consensus       216 ~i~g~~~~~~~g~~~rd~i~v~D~~~~~~~~~~~~~-~~~~~~i~Ni~~~~~~si--------~e~~~~i~~~~g~~~~~  286 (338)
T d1udca_         216 AIFGNDYPTEDGTGVRDYIHVMDLADGHVVAMEKLA-NKPGVHIYNLGAGVGNSV--------LDVVNAFSKACGKPVNY  286 (338)
T ss_dssp             EEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHT-TCCEEEEEEESCSSCEEH--------HHHHHHHHHHHTSCCCE
T ss_pred             EEeCCCcccCCCCceeeEEEEeehhhhccccccccc-cccCcceeeecCCCCCcH--------HHHHHHHHHHHCCCCce
Confidence                             1124566655555443121 223456777776655543        55666666777776666


Q ss_pred             CCCCC
Q 019722          328 VFDPL  332 (336)
Q Consensus       328 ~~~p~  332 (336)
                      .+.|.
T Consensus       287 ~~~~~  291 (338)
T d1udca_         287 HFAPR  291 (338)
T ss_dssp             EEECC
T ss_pred             EECCC
Confidence            65554

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.71  E-value=1.9e-15  Score=139.65  Aligned_cols=193  Identities=13%  Similarity=0.086  Sum_probs=131.5

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChH----------------HHHHHHHHHHhhCCCCceEEEeccCCCH
Q 019722           35 SVTAIITGATSGIGAETARVLAKRGARLVLPARSLK----------------AAEEAKARLASDCPGSDIVVLPLDLSSL   98 (336)
Q Consensus        35 gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~----------------~~~~~~~~l~~~~~~~~~~~~~~Dl~~~   98 (336)
                      |+.||||||+|.||.+++++|+++|++|++++.-..                ...+......... +.++.++++|++|.
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~Dl~d~   79 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALT-GKSIELYVGDICDF   79 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHH-CCCCEEEESCTTSH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEecCCcccccccccccccccccchHHHHHHHHhhc-CCCcEEEEccCCCH
Confidence            789999999999999999999999999999863211                1111222222211 46899999999999


Q ss_pred             HHHHHHHHHHHhcCCCccEEEEcccCCCCC-CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCC
Q 019722           99 SSVRNFVSQFHSLNLPLNLLINNAGKFAHQ-HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSS  177 (336)
Q Consensus        99 ~~v~~~~~~~~~~~~~id~lv~nAg~~~~~-~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~  177 (336)
                      +.++.+++..     ++|+|||.|+..... ...+.+.....+.+|+.|+..+++++...-.        ..++++.||.
T Consensus        80 ~~l~~~~~~~-----~~d~ViHlAa~~~~~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~--------~~~~i~~ss~  146 (393)
T d1i24a_          80 EFLAESFKSF-----EPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGE--------ECHLVKLGTM  146 (393)
T ss_dssp             HHHHHHHHHH-----CCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCT--------TCEEEEECCG
T ss_pred             HHHHHHHHhh-----cchheeccccccccccccccccccccccccccccccHHHHHHHHhcc--------ccceeecccc
Confidence            9999998865     689999999875543 2234556677899999999999988765432        1355666654


Q ss_pred             ccccccCCccccc-----cc--ccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCC
Q 019722          178 IHSWFSGDMIRYL-----GQ--ISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLT  246 (336)
Q Consensus       178 ~~~~~~~~~~~~~-----~~--~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~  246 (336)
                      .............     ..  ......+..+...|+.+|.+.+.+++.+.++..     +++..+.|+.+..+..
T Consensus       147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~~-----l~~~~lR~~~v~G~~~  217 (393)
T d1i24a_         147 GEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWG-----IRATDLNQGVVYGVKT  217 (393)
T ss_dssp             GGGCCCSSCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHC-----CEEEEEEECEEECSCC
T ss_pred             ccccccccccccccccccccccccccccccccccHHHHHhhhhcccccccccccc-----eeeeecccccccCCCc
Confidence            3322111000000     00  000111233345799999999999998887654     9999999999987643

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.70  E-value=4.8e-16  Score=139.49  Aligned_cols=253  Identities=11%  Similarity=0.026  Sum_probs=162.1

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCCC
Q 019722           35 SVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLP  114 (336)
Q Consensus        35 gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  114 (336)
                      .|.+|||||+|.||++++++|+++|++|+.++|......+..   .......++.....|+.+.            .+.+
T Consensus         1 kKKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~---~~~~~~~~~d~~~~~~~~~------------~~~~   65 (312)
T d2b69a1           1 RKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNV---EHWIGHENFELINHDVVEP------------LYIE   65 (312)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGT---GGGTTCTTEEEEECCTTSC------------CCCC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCCcCCHHHH---HHhcCCCceEEEehHHHHH------------HHcC
Confidence            478999999999999999999999999999986322111111   1111134566666665322            2346


Q ss_pred             ccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccccccccc
Q 019722          115 LNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQIS  194 (336)
Q Consensus       115 id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~~~~  194 (336)
                      +|+|||+|+......  ..++..+.+++|+.+...+++++..    .      +.++|++||.+ .++.+...+..+...
T Consensus        66 ~d~VihlAa~~~~~~--~~~~~~~~~~~Nv~g~~~ll~~~~~----~------~~k~I~~SS~~-vy~~~~~~~~~e~~~  132 (312)
T d2b69a1          66 VDQIYHLASPASPPN--YMYNPIKTLKTNTIGTLNMLGLAKR----V------GARLLLASTSE-VYGDPEVHPQSEDYW  132 (312)
T ss_dssp             CSEEEECCSCCSHHH--HTTCHHHHHHHHHHHHHHHHHHHHH----H------TCEEEEEEEGG-GGBSCSSSSBCTTCC
T ss_pred             CCEEEECcccCCchh--HHhCHHHHHHHHHHHHHHHHHHHHH----c------CCcEEEEEChh-eecCCCCCCCCcccc
Confidence            999999999654321  2245567899999999999887643    2      24899998854 444333333333222


Q ss_pred             CCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCcc-chhHHHHHHHHHHh----------
Q 019722          195 RNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRER-EGFITDLVFFLTSK----------  263 (336)
Q Consensus       195 ~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~-~~~~~~~~~~~~~~----------  263 (336)
                      .+..+..+...|+.||.+.+.+++..++..   |  +.+..++|+.|.+|..... ..............          
T Consensus       133 ~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~--~~~~~lR~~~vyGp~~~~~~~~~i~~~i~~~~~g~~i~i~~~g~  207 (312)
T d2b69a1         133 GHVNPIGPRACYDEGKRVAETMCYAYMKQE---G--VEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGS  207 (312)
T ss_dssp             CBCCSSSTTHHHHHHHHHHHHHHHHHHHHH---C--CCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSC
T ss_pred             CCCCCCCCccHHHHHHHHHHHHHHHHHHHh---C--CcEEEEEeeeEECCCCCCCCccHHHHHHHHHHcCCCeEEeCCCC
Confidence            222334556789999999999999988875   3  9999999999998765432 22333443333221          


Q ss_pred             ---hcCChHHHHHHHHHHHhcCccccCCceeeccCcccccccCCCCHHHHHHHHHHHHHhhccCCCCCCCCCC
Q 019722          264 ---LLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWTSKLGSNSNEASRLWAASELLVSRDPKSVFDPLS  333 (336)
Q Consensus       264 ---~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~p~~  333 (336)
                         .....+|.+.+++.++...    ..|. ++..++...+-        ..+.+.+...++...+..|.|..
T Consensus       208 ~~r~~i~v~D~~~~~~~~~~~~----~~~~-~n~~~~~~~~~--------~~~~~~i~~~~~~~~~~~~~~~~  267 (312)
T d2b69a1         208 QTRAFQYVSDLVNGLVALMNSN----VSSP-VNLGNPEEHTI--------LEFAQLIKNLVGSGSEIQFLSEA  267 (312)
T ss_dssp             CEEECEEHHHHHHHHHHHHTSS----CCSC-EEESCCCEEEH--------HHHHHHHHHHHTCCCCEEEECCC
T ss_pred             eeEccEEHHHHHHHHHHHHhhc----cCCc-eEecCCcccch--------hhHHHHHHHHhCCCCceEECCCC
Confidence               1123588888887776532    2444 44444444332        55666777777777666665543

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.70  E-value=4.5e-16  Score=141.54  Aligned_cols=184  Identities=17%  Similarity=0.100  Sum_probs=128.4

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChH---HHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcC
Q 019722           36 VTAIITGATSGIGAETARVLAKRGARLVLPARSLK---AAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLN  112 (336)
Q Consensus        36 k~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~---~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  112 (336)
                      |++|||||+|.||++++++|+++|++|+++++...   ........+.    ..++.++++|++|.+.++.+++..    
T Consensus         2 K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~~~~~~~----~~~v~~~~~Dl~d~~~l~~~~~~~----   73 (347)
T d1z45a2           2 KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLT----KHHIPFYEVDLCDRKGLEKVFKEY----   73 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHH----TSCCCEEECCTTCHHHHHHHHHHS----
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHHhHHhhc----ccCCeEEEeecCCHHHHHHHHhcc----
Confidence            79999999999999999999999999999875321   1111112221    457899999999999999988743    


Q ss_pred             CCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccccccc
Q 019722          113 LPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQ  192 (336)
Q Consensus       113 ~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~~  192 (336)
                       ++|++||+|+......  ..+....+..+|+.++..+++++...-         -.++|++||.... +...... ...
T Consensus        74 -~~d~VihlAa~~~~~~--~~~~~~~~~~~N~~~t~~ll~~~~~~~---------i~~~i~~SS~~vy-g~~~~~~-~~~  139 (347)
T d1z45a2          74 -KIDSVIHFAGLKAVGE--STQIPLRYYHNNILGTVVLLELMQQYN---------VSKFVFSSSATVY-GDATRFP-NMI  139 (347)
T ss_dssp             -CCCEEEECCSCCCHHH--HHHSHHHHHHHHHHHHHHHHHHHHHHT---------CCEEEEEEEGGGG-CCGGGST-TCC
T ss_pred             -CCCEEEEccccccccc--cccCcccccccchhhhHHHHHHHHhcc---------cceEEeecceeee-cCcccCC-CCC
Confidence             6999999999753221  233446788899999999998886432         2489999996533 2111111 111


Q ss_pred             ccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCC
Q 019722          193 ISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTR  244 (336)
Q Consensus       193 ~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~  244 (336)
                      ...++....+...|+.+|.+.+.+++.+.+.... +  +.+..+.|+.+..+
T Consensus       140 ~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~-~--~~~~~lR~~~v~g~  188 (347)
T d1z45a2         140 PIPEECPLGPTNPYGHTKYAIENILNDLYNSDKK-S--WKFAILRYFNPIGA  188 (347)
T ss_dssp             SBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHSTT-S--CEEEEEEECEEECC
T ss_pred             ccccccCCCCCChhHhHHHHHHHHHHHHHHhhcc-C--CcEEEEeecceEee
Confidence            1122222334567999999999999988865332 3  78888888877654

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.69  E-value=2.2e-16  Score=144.65  Aligned_cols=258  Identities=12%  Similarity=0.066  Sum_probs=165.6

Q ss_pred             EEEEeCCCChHHHHHHHHHHHCCCEEE-EeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCCCc
Q 019722           37 TAIITGATSGIGAETARVLAKRGARLV-LPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLPL  115 (336)
Q Consensus        37 ~~lItGgs~gIG~aia~~L~~~G~~V~-~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i  115 (336)
                      .||||||+|.||++++++|+++|++|+ .+++......  ...+.......++.++++|++|...+..+++..     .+
T Consensus         2 kILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~~--~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~-----~~   74 (361)
T d1kewa_           2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGN--LESLSDISESNRYNFEHADICDSAEITRIFEQY-----QP   74 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCC--GGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHH-----CC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcccc--HHHHHhhhhcCCcEEEEccCCCHHHHHHHHHhC-----CC
Confidence            489999999999999999999999754 4443221110  111222222468999999999999999988754     68


Q ss_pred             cEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcccccc----
Q 019722          116 NLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLG----  191 (336)
Q Consensus       116 d~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~----  191 (336)
                      |+|||+|+.....  .+.++...++++|+.|+..+++.+...............++|++||.... +........+    
T Consensus        75 d~VihlAa~~~~~--~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~vy-g~~~~~~~~~~~~~  151 (361)
T d1kewa_          75 DAVMHLAAESHVD--RSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVY-GDLPHPDEVENSVT  151 (361)
T ss_dssp             SEEEECCSCCCHH--HHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGG-CCCCCGGGSCTTSC
T ss_pred             CEEEECccccchh--hHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccceee-CCCccCCccccccC
Confidence            9999999864321  23345577899999999999999988754310000002589999996433 2111111111    


Q ss_pred             -cccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHHHHHHHHhh------
Q 019722          192 -QISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSKL------  264 (336)
Q Consensus       192 -~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~------  264 (336)
                       ....+.....+...|+.||.+.+.+++.++....     +.+..+.|+.|.+|.... ......+........      
T Consensus       152 ~~~~~e~~~~~p~s~Yg~sK~~~E~~~~~~~~~~~-----i~~~~lR~~~vyGp~~~~-~~~i~~~i~~~~~g~~~~v~g  225 (361)
T d1kewa_         152 LPLFTETTAYAPSSPYSASKASSDHLVRAWRRTYG-----LPTIVTNCSNNYGPYHFP-EKLIPLVILNALEGKPLPIYG  225 (361)
T ss_dssp             CCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHC-----CCEEEEEECEEESTTCCT-TSHHHHHHHHHHHTCCEEEET
T ss_pred             CCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhC-----CCEEEEecCceECcCCCc-CcHHHHHHHHHHcCCCcEEeC
Confidence             1112223344556799999999999999987653     899999999999886543 123333333332211      


Q ss_pred             -------cCChHHHHHHHHHHHhcCccccCCceeeccCcccccccCCCCHHHHHHHHHHHH
Q 019722          265 -------LKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWTSKLGSNSNEASRLWAASE  318 (336)
Q Consensus       265 -------~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~w~~~~  318 (336)
                             ....+|.|.++..++..+.    .|..++...+...+    -.+..+.+++.+.
T Consensus       226 ~g~~~r~~i~v~D~a~ai~~~~~~~~----~~~~~Ni~s~~~~s----~~~~~~~i~~~~~  278 (361)
T d1kewa_         226 KGDQIRDWLYVEDHARALHMVVTEGK----AGETYNIGGHNEKK----NLDVVFTICDLLD  278 (361)
T ss_dssp             TSCCEEEEEEHHHHHHHHHHHHHHCC----TTCEEEECCCCEEE----HHHHHHHHHHHHH
T ss_pred             CCCeEEeCEEHHHHHHHHHHHHhcCC----CCCeEEECCCCCcc----hHHHHhHhhhhcc
Confidence                   1246888999988887543    35566665554443    2344455554443

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.68  E-value=1.2e-15  Score=138.30  Aligned_cols=223  Identities=13%  Similarity=0.016  Sum_probs=146.7

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHH-----HHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHh
Q 019722           36 VTAIITGATSGIGAETARVLAKRGARLVLPARSLKA-----AEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHS  110 (336)
Q Consensus        36 k~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~-----~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  110 (336)
                      |+||||||+|.||.+++++|+++|++|+.++|....     .+........ ....++.++.+|++|...+..+++..  
T Consensus         2 KI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~~~--   78 (347)
T d1t2aa_           2 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQA-HIEGNMKLHYGDLTDSTCLVKIINEV--   78 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC----------CEEEEECCTTCHHHHHHHHHHH--
T ss_pred             CEEEEecCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHhhchhh-hccCCcEEEEeecCCchhhHHHHhhc--
Confidence            566999999999999999999999999999986431     1111111111 11357999999999999999998765  


Q ss_pred             cCCCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccccc
Q 019722          111 LNLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYL  190 (336)
Q Consensus       111 ~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~  190 (336)
                         .+++++++|+.....  ...+.....+++|+.|+..++.++.......      ..++|++||.+ .++.+...+++
T Consensus        79 ---~~~~v~~~~a~~~~~--~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~------~~~~i~~SS~~-vyg~~~~~~~~  146 (347)
T d1t2aa_          79 ---KPTEIYNLGAQSHVK--ISFDLAEYTADVDGVGTLRLLDAVKTCGLIN------SVKFYQASTSE-LYGKVQEIPQK  146 (347)
T ss_dssp             ---CCSEEEECCSCCCHH--HHHHSHHHHHHHHTHHHHHHHHHHHHTTCTT------TCEEEEEEEGG-GTCSCSSSSBC
T ss_pred             ---ccceeeeeeeccccc--hhhccchhhhhhHHHHHHHHHHHHHHcCCCC------CcEEEEecchh-eecCCCCCCCC
Confidence               678889888854322  1334556678999999999998876553322      24899998853 44432222221


Q ss_pred             ccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccc--hhH-HHHHHHHHHh----
Q 019722          191 GQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRERE--GFI-TDLVFFLTSK----  263 (336)
Q Consensus       191 ~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~--~~~-~~~~~~~~~~----  263 (336)
                           ++....+...|+.||.+.|.+++.+.+...     +.+..+.|+.+.+|......  ... ..........    
T Consensus       147 -----E~~~~~P~~~Yg~sK~~aE~~~~~~~~~~~-----~~~~ilr~~~vyGp~~~~~~~~~~~~~~i~~~~~~~~~~~  216 (347)
T d1t2aa_         147 -----ETTPFYPRSPYGAAKLYAYWIVVNFREAYN-----LFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECF  216 (347)
T ss_dssp             -----TTSCCCCCSHHHHHHHHHHHHHHHHHHHHC-----CEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCE
T ss_pred             -----CCCCCCCCCHHHHHHHHHHHHHHHHHHHhC-----CCEEEEEecceeCCCCCCCccccccceeeehhhcCCccee
Confidence                 222234456799999999999999887653     88888999999887533321  111 1111111110    


Q ss_pred             ---------hcCChHHHHHHHHHHHhcCc
Q 019722          264 ---------LLKTIPQGAATTCYVAIHPR  283 (336)
Q Consensus       264 ---------~~~~~~~~a~~~~~l~~~~~  283 (336)
                               .....+|.+.++..++....
T Consensus       217 ~~g~g~~~r~~i~v~D~~~a~~~~~~~~~  245 (347)
T d1t2aa_         217 SLGNLDAKRDWGHAKDYVEAMWLMLQNDE  245 (347)
T ss_dssp             EESCTTCEECCEEHHHHHHHHHHHHHSSS
T ss_pred             ecCCCcceeeeeEecHHHHHHHHHhhcCC
Confidence                     11245788999988887543

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.67  E-value=9.1e-15  Score=131.94  Aligned_cols=225  Identities=15%  Similarity=0.025  Sum_probs=149.0

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChH-----HHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           35 SVTAIITGATSGIGAETARVLAKRGARLVLPARSLK-----AAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        35 gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~-----~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      .|+||||||||.||++++++|+++|++|+.++|...     +...+...... .....+.++.+|+++.+++...++.. 
T Consensus         1 ~k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Di~~~~~~~~~~~~~-   78 (339)
T d1n7ha_           1 RKIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHN-VNKALMKLHYADLTDASSLRRWIDVI-   78 (339)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC---------CCEEEEECCTTCHHHHHHHHHHH-
T ss_pred             CCEEEEeCCccHHHHHHHHHHHHCcCEEEEEECCCcccchhhhhhhhhhhhh-ccccceEEEEccccCHHHHHHHHhhh-
Confidence            489999999999999999999999999999998532     11111111111 11357899999999999999988754 


Q ss_pred             hcCCCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcccc
Q 019722          110 SLNLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRY  189 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~  189 (336)
                          ++|++||+|+.....  ...+.....+..|+.+...++.++.....+...    ..+++..||.. .....     
T Consensus        79 ----~~D~Vih~Aa~~~~~--~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~----~~~~~~~ss~~-~~~~~-----  142 (339)
T d1n7ha_          79 ----KPDEVYNLAAQSHVA--VSFEIPDYTADVVATGALRLLEAVRSHTIDSGR----TVKYYQAGSSE-MFGST-----  142 (339)
T ss_dssp             ----CCSEEEECCSCCCHH--HHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCC----CCEEEEEEEGG-GGTTS-----
T ss_pred             ----ccchhhhcccccccc--ccccCccccccccccccchhhhhhhhccccccc----ceeeeecccce-ecccC-----
Confidence                789999999975432  123456678899999999999888776655421    23455555443 22211     


Q ss_pred             cccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccc--hhHHHHHHHHHHh----
Q 019722          190 LGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRERE--GFITDLVFFLTSK----  263 (336)
Q Consensus       190 ~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~--~~~~~~~~~~~~~----  263 (336)
                       ....++..+..+...|+.+|.+.+.++..+.+...     +.+..+.|+.|.+|......  .............    
T Consensus       143 -~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~-----~~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~  216 (339)
T d1n7ha_         143 -PPPQSETTPFHPRSPYAASKCAAHWYTVNYREAYG-----LFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTK  216 (339)
T ss_dssp             -CSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHC-----CEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCC
T ss_pred             -CCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHhC-----CCEEEEEEccccCCCCCCCCCcchhhHHHHHHhcCCCCe
Confidence             11112222344566899999999999999887653     89999999999988644321  1111111111110    


Q ss_pred             ----------hcCChHHHHHHHHHHHhcCc
Q 019722          264 ----------LLKTIPQGAATTCYVAIHPR  283 (336)
Q Consensus       264 ----------~~~~~~~~a~~~~~l~~~~~  283 (336)
                                .....+|++.++..++..+.
T Consensus       217 ~~~g~~~~~rd~~~v~D~a~~~~~~~~~~~  246 (339)
T d1n7ha_         217 LFLGNLQASRDWGFAGDYVEAMWLMLQQEK  246 (339)
T ss_dssp             EEESCTTCEEECEEHHHHHHHHHHHHTSSS
T ss_pred             EEeCCCCccccceeeehHHHHHHHHHhcCC
Confidence                      01236788888888887553

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.66  E-value=3.1e-15  Score=134.09  Aligned_cols=220  Identities=17%  Similarity=0.043  Sum_probs=147.4

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCCCc
Q 019722           36 VTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLPL  115 (336)
Q Consensus        36 k~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i  115 (336)
                      |+||||||+|.||++++++|+++|++|+.++|......  ...++......++.++.+|++|..++..++...     ..
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~--~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~   73 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDT--RWRLRELGIEGDIQYEDGDMADACSVQRAVIKA-----QP   73 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCC--CHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHH-----CC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCccc--HHHHHHhcccCCcEEEEccccChHHhhhhhccc-----cc
Confidence            78999999999999999999999999999998753211  112222222457999999999999999888765     56


Q ss_pred             cEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcccccccccC
Q 019722          116 NLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISR  195 (336)
Q Consensus       116 d~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~~~~~  195 (336)
                      ++++++|+.....  ...+.....+.+|+.++..++.++...-.        ..++++.||. ..++......+     +
T Consensus        74 ~~~~~~a~~~~~~--~~~~~~~~~~~~n~~g~~~~l~~~~~~~~--------~~~~i~~Ss~-~~~~~~~~~~~-----~  137 (321)
T d1rpna_          74 QEVYNLAAQSFVG--ASWNQPVTTGVVDGLGVTHLLEAIRQFSP--------ETRFYQASTS-EMFGLIQAERQ-----D  137 (321)
T ss_dssp             SEEEECCSCCCHH--HHTTSHHHHHHHHTHHHHHHHHHHHHHCT--------TSEEEEEEEG-GGGCSCSSSSB-----C
T ss_pred             ccccccccccccc--ccccchHHHHhhhhhchHHHHHHHHHhCC--------Ccccccccch-hhcCcccCCCC-----C
Confidence            7888888754332  12344567899999999998887765422        2355555554 34433222221     2


Q ss_pred             CCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccc--hhHHHHHHHHHH-h---------
Q 019722          196 NKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRERE--GFITDLVFFLTS-K---------  263 (336)
Q Consensus       196 ~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~--~~~~~~~~~~~~-~---------  263 (336)
                      ++........|+.+|.+.+.+++.+..+..     +.+..+.|+.+..|......  ............ .         
T Consensus       138 E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~-----~~~~~lr~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~i~~g~g  212 (321)
T d1rpna_         138 ENTPFYPRSPYGVAKLYGHWITVNYRESFG-----LHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNV  212 (321)
T ss_dssp             TTSCCCCCSHHHHHHHHHHHHHHHHHHHHC-----CCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCT
T ss_pred             CCCCccccChhHHHHHHHHHHHHHHHhhcC-----CcEEEEEEecccCCCccccccHHHHHHHHHHHHhCCCCcEEECCC
Confidence            223344556799999999999999887754     88899999999888644321  111111111111 0         


Q ss_pred             ----hcCChHHHHHHHHHHHhcCc
Q 019722          264 ----LLKTIPQGAATTCYVAIHPR  283 (336)
Q Consensus       264 ----~~~~~~~~a~~~~~l~~~~~  283 (336)
                          .....+|.+.+++.++..+.
T Consensus       213 ~~~r~~i~v~D~~~~~~~~~~~~~  236 (321)
T d1rpna_         213 DAKRDWGFAGDYVEAMWLMLQQDK  236 (321)
T ss_dssp             TCEEECEEHHHHHHHHHHHHHSSS
T ss_pred             CeEEccEEeHHHHHHHHHHHhcCC
Confidence                01345788999999887554

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=99.64  E-value=1.9e-14  Score=130.19  Aligned_cols=252  Identities=12%  Similarity=0.014  Sum_probs=161.2

Q ss_pred             EEEEeCCCChHHHHHHHHHHHCC-CEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCCCc
Q 019722           37 TAIITGATSGIGAETARVLAKRG-ARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLPL  115 (336)
Q Consensus        37 ~~lItGgs~gIG~aia~~L~~~G-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i  115 (336)
                      .+|||||+|.||++++++|+++| ++|+.+++......+..       ...++.++++|+++.+.+.+.+.+      .+
T Consensus         2 KILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~-------~~~~~~~i~~Di~~~~~~~~~~~~------~~   68 (342)
T d2blla1           2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL-------NHPHFHFVEGDISIHSEWIEYHVK------KC   68 (342)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGT-------TCTTEEEEECCTTTCSHHHHHHHH------HC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhc-------cCCCeEEEECccCChHHHHHHHHh------CC
Confidence            48999999999999999999999 48999887654332221       146899999999988776553321      58


Q ss_pred             cEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcccccc--cc
Q 019722          116 NLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLG--QI  193 (336)
Q Consensus       116 d~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~--~~  193 (336)
                      |++||+|+.....  ...+.....+.+|+.++..+++++...          +.+.+++||........ .....+  ..
T Consensus        69 d~Vih~a~~~~~~--~~~~~~~~~~~~nv~gt~~ll~~~~~~----------~~~~~~~ss~~~~~~~~-~~~~~~~~~~  135 (342)
T d2blla1          69 DVVLPLVAIATPI--EYTRNPLRVFELDFEENLRIIRYCVKY----------RKRIIFPSTSEVYGMCS-DKYFDEDHSN  135 (342)
T ss_dssp             SEEEECBCCCCHH--HHHHSHHHHHHHHTHHHHHHHHHHHHT----------TCEEEEECCGGGGBTCC-CSSBCTTTCC
T ss_pred             Ccccccccccccc--ccccCCccccccccccccccccccccc----------ccccccccccccccccc-cccccccccc
Confidence            9999999975432  123444578999999999999887543          24667776654333221 111111  11


Q ss_pred             cCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccc-------hhHHHHHHHHHHh---
Q 019722          194 SRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRERE-------GFITDLVFFLTSK---  263 (336)
Q Consensus       194 ~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~-------~~~~~~~~~~~~~---  263 (336)
                      ........+...|+.||.+.+.+++.+++...     +.+..+.|..+..+......       .....+.......   
T Consensus       136 ~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~-----~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  210 (342)
T d2blla1         136 LIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEG-----LQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPI  210 (342)
T ss_dssp             CBCCCTTCGGGHHHHHHHHHHHHHHHHHHHHC-----CCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCE
T ss_pred             ccccccCCCcchhhhcccchhhhhhhhhcccC-----ceeEEeeccccccccccccccccccccccchHHHHHHHhCCCc
Confidence            11222244567899999999999999988763     88889999888876544321       1222222222111   


Q ss_pred             ----------hcCChHHHHHHHHHHHhcCccccCCceeeccCc-ccccccCCCCHHHHHHHHHHHHHhhccCCCCC
Q 019722          264 ----------LLKTIPQGAATTCYVAIHPRLVNVSGKYFADCN-EAWTSKLGSNSNEASRLWAASELLVSRDPKSV  328 (336)
Q Consensus       264 ----------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~-~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~  328 (336)
                                .....+|.+.++..++..+. ....|+.|+... ....+-        +++-+.+..+++..+...
T Consensus       211 ~~~~~g~~~r~~i~v~D~~~a~~~~~~~~~-~~~~g~~~Nig~~~~~~t~--------~~l~~~i~~~~~~~~~~~  277 (342)
T d2blla1         211 KLIDGGKQKRCFTDIRDGIEALYRIIENAG-NRCDGEIINIGNPENEASI--------EELGEMLLASFEKHPLRH  277 (342)
T ss_dssp             EEGGGSCCEEECEEHHHHHHHHHHHHHCGG-GTTTTEEEEECCTTSEEEH--------HHHHHHHHHHHHTCTTGG
T ss_pred             cccCCCCeeeeecccccccceeeeehhhcc-ccCCCeEEEEecccchhHH--------HHHHHHHHHHhCCCcccc
Confidence                      12356888999999987543 234577887643 333332        444455556665554443

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=99.64  E-value=5.2e-15  Score=134.49  Aligned_cols=227  Identities=14%  Similarity=0.049  Sum_probs=152.4

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcC
Q 019722           33 LSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLN  112 (336)
Q Consensus        33 l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  112 (336)
                      ++||+||||||+|.||.+++++|+++|++|+.++|+........+..+.   ...+.++.+|++|++.+..+++..    
T Consensus         6 ~~~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~---~~~i~~~~~Dl~d~~~l~~~~~~~----   78 (356)
T d1rkxa_           6 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARV---ADGMQSEIGDIRDQNKLLESIREF----   78 (356)
T ss_dssp             HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTT---TTTSEEEECCTTCHHHHHHHHHHH----
T ss_pred             hCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHHhhhhc---ccCCeEEEeeccChHhhhhhhhhc----
Confidence            5799999999999999999999999999999999987655444433321   357999999999999999988754    


Q ss_pred             CCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccccccc
Q 019722          113 LPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQ  192 (336)
Q Consensus       113 ~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~~  192 (336)
                       .+|+++|.|+.....  ...+..+..+.+|+.++..+++++...-.        ...++..|+..........     .
T Consensus        79 -~~~~v~~~aa~~~~~--~~~~~~~~~~~~Nv~g~~n~l~~~~~~~~--------~~~~~~~s~~~~~~~~~~~-----~  142 (356)
T d1rkxa_          79 -QPEIVFHMAAQPLVR--LSYSEPVETYSTNVMGTVYLLEAIRHVGG--------VKAVVNITSDKCYDNKEWI-----W  142 (356)
T ss_dssp             -CCSEEEECCSCCCHH--HHHHCHHHHHHHHTHHHHHHHHHHHHHCC--------CCEEEEECCGGGBCCCCSS-----S
T ss_pred             -hhhhhhhhhcccccc--ccccCCccccccccccchhhhhhhhcccc--------ccccccccccccccccccc-----c
Confidence             689999999864332  13455677899999999988887775321        2344444444333221111     1


Q ss_pred             ccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccC----CCcEEEEEeeCCceeCCCCCccchhHHHHHHHHHHhh----
Q 019722          193 ISRNKSHYDATRAYALSKLANVLHTKELAQRLKQM----EANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSKL----  264 (336)
Q Consensus       193 ~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~----g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~----  264 (336)
                      ..+......+...|+.+|...+.+++..+.++...    ..++.+..+.|+.+..+....................    
T Consensus       143 ~~~~~~~~~p~~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~vyGp~~~~~~~~i~~~~~~~~~~~~~~~  222 (356)
T d1rkxa_         143 GYRENEAMGGYDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVII  222 (356)
T ss_dssp             CBCTTSCBCCSSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHTTCCEEC
T ss_pred             ccccccccCCCCccccccccchhhhhHHhhhcccchhccccCceEEeccCCCeeCCCcchhhHHHHHHHHHHhCCCceEE
Confidence            11112223445679999999999999988876431    0138899999999987754333333333333332211    


Q ss_pred             --------cCChHHHHHHHHHHHhcC
Q 019722          265 --------LKTIPQGAATTCYVAIHP  282 (336)
Q Consensus       265 --------~~~~~~~a~~~~~l~~~~  282 (336)
                              .....|.+.+...++..+
T Consensus       223 ~~~~~~~~~~~v~D~~~a~~~~~~~~  248 (356)
T d1rkxa_         223 RNPHAIRPWQHVLEPLSGYLLLAQKL  248 (356)
T ss_dssp             SCTTCEECCEETHHHHHHHHHHHHHH
T ss_pred             eeccccccccccccccchhhhhhhhh
Confidence                    112467787777776543

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.63  E-value=6.5e-15  Score=133.60  Aligned_cols=261  Identities=13%  Similarity=0.024  Sum_probs=160.2

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeC------ChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           36 VTAIITGATSGIGAETARVLAKRGARLVLPAR------SLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        36 k~~lItGgs~gIG~aia~~L~~~G~~V~~~~r------~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      |+||||||+|.||.+++++|+++|++|+.+++      +.....+..+.+... .+.++.++++|++|.+.+.+++..  
T Consensus         3 kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~l~~~~~~--   79 (346)
T d1ek6a_           3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQEL-TGRSVEFEEMDILDQGALQRLFKK--   79 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHH-HTCCCEEEECCTTCHHHHHHHHHH--
T ss_pred             CeEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHHHHHh-cCCCcEEEEeeccccccccccccc--
Confidence            78899999999999999999999999998863      111111112222211 156899999999999999888764  


Q ss_pred             hcCCCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcccc
Q 019722          110 SLNLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRY  189 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~  189 (336)
                         ..+++++|+|+.....  ...++..+.+++|+.++..+++++...    +     -.++|++||..........  .
T Consensus        80 ---~~~~~i~h~Aa~~~~~--~~~~~p~~~~~~Nv~gt~~l~~~~~~~----~-----v~~~i~~ss~~~~~~~~~~--~  143 (346)
T d1ek6a_          80 ---YSFMAVIHFAGLKAVG--ESVQKPLDYYRVNLTGTIQLLEIMKAH----G-----VKNLVFSSSATVYGNPQYL--P  143 (346)
T ss_dssp             ---CCEEEEEECCSCCCHH--HHHHCHHHHHHHHHHHHHHHHHHHHHT----T-----CCEEEEEEEGGGGCSCSSS--S
T ss_pred             ---cccccccccccccCcH--hhHhCHHHHHHhhhcccccccchhhhc----C-----cccccccccceeeeccccc--c
Confidence               2688999999965432  223445678999999999888776542    1     2478888776544321111  1


Q ss_pred             cccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCc--------c-chhHHHHHHHH
Q 019722          190 LGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRE--------R-EGFITDLVFFL  260 (336)
Q Consensus       190 ~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~--------~-~~~~~~~~~~~  260 (336)
                      ..   ...........|+.+|...+...+.+++..  .+  +....+.|+.+.++....        . ....+......
T Consensus       144 ~~---~~~~~~~~~~~Y~~~k~~~e~~~~~~~~~~--~~--~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (346)
T d1ek6a_         144 LD---EAHPTGGCTNPYGKSKFFIEEMIRDLCQAD--KT--WNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVA  216 (346)
T ss_dssp             BC---TTSCCCCCSSHHHHHHHHHHHHHHHHHHHC--TT--CEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHH
T ss_pred             cc---ccccccccCChHHHHHHHHHHHHHHHHHhc--cC--CceEEEeecceeccCCCCCcCccccccHHHHHHHHHHHH
Confidence            11   111112334579999999999988876542  23  888888898887653211        1 11222222211


Q ss_pred             HHh--------------------hcCChHHHHHHHHHHHhcCccccCCceeeccCcccccccCCCCHHHHHHHHHHHHHh
Q 019722          261 TSK--------------------LLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWTSKLGSNSNEASRLWAASELL  320 (336)
Q Consensus       261 ~~~--------------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~  320 (336)
                      ...                    ....++|.|.+...++.... ....++.|+.++....+-        .++-+.+.++
T Consensus       217 ~~~~~~i~i~g~~~~~~~g~~~Rdfi~v~D~a~~~~~~~~~~~-~~~~~~i~Ni~~~~~~s~--------~dl~~~i~~~  287 (346)
T d1ek6a_         217 IGRREALNVFGNDYDTEDGTGVRDYIHVVDLAKGHIAALRKLK-EQCGCRIYNLGTGTGYSV--------LQMVQAMEKA  287 (346)
T ss_dssp             HTSSSCEEEECSCSSSSSSSCEECEEEHHHHHHHHHHHHHHHT-TTCCEEEEEECCSCCEEH--------HHHHHHHHHH
T ss_pred             HcCCCcEEEcCCcccCCCCCeeEeEEEEEeccchhhhhccccc-cccCceEEEeCCCCcccH--------HHHHHHHHHH
Confidence            110                    12456777877766654222 233566777666555442        3444555566


Q ss_pred             hccCCCCCCCC
Q 019722          321 VSRDPKSVFDP  331 (336)
Q Consensus       321 ~~~~~~~~~~p  331 (336)
                      ++...+..+.|
T Consensus       288 ~~~~~~~~~~~  298 (346)
T d1ek6a_         288 SGKKIPYKVVA  298 (346)
T ss_dssp             HCSCCCEEEEC
T ss_pred             hCCCCCeEECC
Confidence            66655444444

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.63  E-value=2.4e-14  Score=129.54  Aligned_cols=231  Identities=14%  Similarity=0.043  Sum_probs=151.8

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCCh----HHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHh
Q 019722           35 SVTAIITGATSGIGAETARVLAKRGARLVLPARSL----KAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHS  110 (336)
Q Consensus        35 gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~----~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  110 (336)
                      -|++|||||||.||++++++|.++|++|+.++|..    ..... ...+.......++.++.+|+.|.........    
T Consensus        16 ~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~----   90 (341)
T d1sb8a_          16 PKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDE-VRSLVSEKQWSNFKFIQGDIRNLDDCNNACA----   90 (341)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHH-HHHHSCHHHHTTEEEEECCTTSHHHHHHHHT----
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHH-HHHhhhhcccCCeeEEeeccccccccccccc----
Confidence            48999999999999999999999999999998632    22221 1222111113579999999999887766543    


Q ss_pred             cCCCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccccc
Q 019722          111 LNLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYL  190 (336)
Q Consensus       111 ~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~  190 (336)
                         ..+.+++.++.....  ...++....+++|+.|+..+++++...-         ..++|++||... ++.....+. 
T Consensus        91 ---~~~~v~~~~a~~~~~--~~~~~~~~~~~~Nv~gt~~ll~~~~~~~---------~~~~i~~SS~~v-yg~~~~~~~-  154 (341)
T d1sb8a_          91 ---GVDYVLHQAALGSVP--RSINDPITSNATNIDGFLNMLIAARDAK---------VQSFTYAASSST-YGDHPGLPK-  154 (341)
T ss_dssp             ---TCSEEEECCSCCCHH--HHHHCHHHHHHHHTHHHHHHHHHHHHTT---------CSEEEEEEEGGG-GTTCCCSSB-
T ss_pred             ---ccccccccccccccc--ccccCccchhheeehhHHHHHHHHHhcC---------CceEEEccccee-eCCCCCCCc-
Confidence               678888888754322  1346677899999999999988876531         258999998754 332222222 


Q ss_pred             ccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccc---hhHHHHHHHHHHhh---
Q 019722          191 GQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRERE---GFITDLVFFLTSKL---  264 (336)
Q Consensus       191 ~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~---~~~~~~~~~~~~~~---  264 (336)
                          .++....+...|+.+|.+.+.+++.+++...     +++..+.|+.+.++......   ..............   
T Consensus       155 ----~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~-----i~~~ilR~~~v~G~~~~~~~~~~~~i~~~~~~~~~g~~i~  225 (341)
T d1sb8a_         155 ----VEDTIGKPLSPYAVTKYVNELYADVFSRCYG-----FSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVY  225 (341)
T ss_dssp             ----CTTCCCCCCSHHHHHHHHHHHHHHHHHHHHC-----CCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCE
T ss_pred             ----cCCCCCCCCCcchHHHHHHHHHHHHHHHHhC-----CCeEEEEeceeeccCcCCCCchhhhHHHHHHHHHcCCceE
Confidence                2222234456799999999999999987653     88999999999877544321   23333333322110   


Q ss_pred             ----------cCChHHHHHHHHHHHhcCccccCCceeeccCcc
Q 019722          265 ----------LKTIPQGAATTCYVAIHPRLVNVSGKYFADCNE  297 (336)
Q Consensus       265 ----------~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~  297 (336)
                                ...++|.+.+...++..+..  ..|..+.....
T Consensus       226 ~~g~g~~~r~~i~v~D~~~a~~~~~~~~~~--~~~~~~~~~~~  266 (341)
T d1sb8a_         226 INGDGETSRDFCYIENTVQANLLAATAGLD--ARNQVYNIAVG  266 (341)
T ss_dssp             EESSSCCEECCEEHHHHHHHHHHHHTCCGG--GCSEEEEESCS
T ss_pred             EcCCCCEEEEEEEEeccchhhhhhhhcccc--ccceeeeeccc
Confidence                      12237788888887764432  24555544443

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.62  E-value=3.9e-15  Score=125.26  Aligned_cols=200  Identities=13%  Similarity=0.033  Sum_probs=129.6

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcC
Q 019722           33 LSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLN  112 (336)
Q Consensus        33 l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  112 (336)
                      |..|+++||||||+||.+++++|+++|++|.++.|+++++...        ...++.++.+|++|++++.++++      
T Consensus         1 m~~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~~--------~~~~~~~~~gD~~d~~~l~~al~------   66 (205)
T d1hdoa_           1 MAVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSE--------GPRPAHVVVGDVLQAADVDKTVA------   66 (205)
T ss_dssp             CCCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSS--------SCCCSEEEESCTTSHHHHHHHHT------
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhcccc--------cccccccccccccchhhHHHHhc------
Confidence            4678899999999999999999999999999999998764321        14578999999999999888765      


Q ss_pred             CCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccccccc
Q 019722          113 LPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQ  192 (336)
Q Consensus       113 ~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~~  192 (336)
                       +.|++|+++|.....   +..      .++..+.    +.+++.+++++     -.|+|++||......+.        
T Consensus        67 -~~d~vi~~~g~~~~~---~~~------~~~~~~~----~~l~~aa~~~~-----v~r~i~~ss~~~~~~~~--------  119 (205)
T d1hdoa_          67 -GQDAVIVLLGTRNDL---SPT------TVMSEGA----RNIVAAMKAHG-----VDKVVACTSAFLLWDPT--------  119 (205)
T ss_dssp             -TCSEEEECCCCTTCC---SCC------CHHHHHH----HHHHHHHHHHT-----CCEEEEECCGGGTSCTT--------
T ss_pred             -CCCEEEEEeccCCch---hhh------hhhHHHH----HHHHHHHHhcC-----CCeEEEEeeeeccCCCc--------
Confidence             679999999964332   111      1222233    33344455554     36999999865432211        


Q ss_pred             ccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHHHHHHHHhhcCChHHHH
Q 019722          193 ISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSKLLKTIPQGA  272 (336)
Q Consensus       193 ~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~a  272 (336)
                           ...+....|...|...+.+.+       ..+  ++...|.||.+...-..........   ........+.+|+|
T Consensus       120 -----~~~~~~~~~~~~~~~~e~~l~-------~~~--~~~tiirp~~~~~~~~~~~~~~~~~---~~~~~~~i~~~DvA  182 (205)
T d1hdoa_         120 -----KVPPRLQAVTDDHIRMHKVLR-------ESG--LKYVAVMPPHIGDQPLTGAYTVTLD---GRGPSRVISKHDLG  182 (205)
T ss_dssp             -----CSCGGGHHHHHHHHHHHHHHH-------HTC--SEEEEECCSEEECCCCCSCCEEESS---SCSSCSEEEHHHHH
T ss_pred             -----cccccccccchHHHHHHHHHH-------hcC--CceEEEecceecCCCCcccEEEeeC---CCCCCCcCCHHHHH
Confidence                 113344567777766664432       345  9999999998854322211000000   00111234678999


Q ss_pred             HHHHHHHhcCccccCCceeec
Q 019722          273 ATTCYVAIHPRLVNVSGKYFA  293 (336)
Q Consensus       273 ~~~~~l~~~~~~~~~~G~~~~  293 (336)
                      ..++.++..++.   .|+.+.
T Consensus       183 ~~~~~~l~~~~~---~g~~~~  200 (205)
T d1hdoa_         183 HFMLRCLTTDEY---DGHSTY  200 (205)
T ss_dssp             HHHHHTTSCSTT---TTCEEE
T ss_pred             HHHHHHhCCCCC---CCEEEe
Confidence            999999876542   365543

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=99.62  E-value=4.4e-15  Score=132.85  Aligned_cols=171  Identities=13%  Similarity=0.086  Sum_probs=125.8

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCC
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNL  113 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  113 (336)
                      +.|.+|||||+|.||.+++++|+++|+.|+++.+..                      ++|+.+...+..+++.-     
T Consensus         1 ~kkkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~~----------------------~~~~~~~~~~~~~~~~~-----   53 (315)
T d1e6ua_           1 AKQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD----------------------ELNLLDSRAVHDFFASE-----   53 (315)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT----------------------TCCTTCHHHHHHHHHHH-----
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCcCEEEEecCch----------------------hccccCHHHHHHHHhhc-----
Confidence            357899999999999999999999999888765431                      25899999988887632     


Q ss_pred             CccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcccccccc
Q 019722          114 PLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQI  193 (336)
Q Consensus       114 ~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~~~  193 (336)
                      .+|.++|+|+..... .....+..+.+.+|+.++..+++++...-         -.++|++||.+. ++.....++++..
T Consensus        54 ~~d~v~~~a~~~~~~-~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~---------v~~~i~~SS~~v-yg~~~~~~~~E~~  122 (315)
T d1e6ua_          54 RIDQVYLAAAKVGGI-VANNTYPADFIYQNMMIESNIIHAAHQND---------VNKLLFLGSSCI-YPKLAKQPMAESE  122 (315)
T ss_dssp             CCSEEEECCCCCCCH-HHHHHCHHHHHHHHHHHHHHHHHHHHHTT---------CCEEEEECCGGG-SCTTCCSSBCGGG
T ss_pred             CCCEEEEcchhcccc-ccchhhHHHHHHHHHHHHHHHHHHHHHcC---------CCEEEEECCceE-cCCCCCCCccCCc
Confidence            689999999765432 11234456678899999999888775531         248999998654 3333333333332


Q ss_pred             cCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCC
Q 019722          194 SRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTR  247 (336)
Q Consensus       194 ~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~  247 (336)
                      ..+....+....|+.||.+.|.+++.+.++.   |  +++..+.|+.|.+|...
T Consensus       123 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---g--l~~~ilR~~~vyGp~~~  171 (315)
T d1e6ua_         123 LLQGTLEPTNEPYAIAKIAGIKLCESYNRQY---G--RDYRSVMPTNLYGPHDN  171 (315)
T ss_dssp             TTSSCCCGGGHHHHHHHHHHHHHHHHHHHHH---C--CEEEEEEECEEESTTCC
T ss_pred             cccCCCCCCCCHHHHHHHHHHHHHHHHHHHh---C--CCEEEEeeccEECCCCC
Confidence            2233334556679999999999999998775   3  99999999999987543

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=99.62  E-value=1.3e-13  Score=123.84  Aligned_cols=262  Identities=15%  Similarity=0.084  Sum_probs=157.3

Q ss_pred             EEEEeCCCChHHHHHHHHHHHCCCEEEEeeCC-hHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCCCc
Q 019722           37 TAIITGATSGIGAETARVLAKRGARLVLPARS-LKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLPL  115 (336)
Q Consensus        37 ~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~-~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i  115 (336)
                      .+|||||+|.||++++++|+++|++|+.+++- .....+....+..   ..++.++.+|+++.+++..+++..     ++
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~~~~~~~~~---~~~~~~i~~Di~~~~~l~~~~~~~-----~~   73 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSS---LGNFEFVHGDIRNKNDVTRLITKY-----MP   73 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHT---TCCCEEEECCTTCHHHHHHHHHHH-----CC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhHHHHhhc---cCCcEEEEcccCCHHHHHHHHHhc-----CC
Confidence            58999999999999999999999999998742 1222223333333   358999999999999999988765     68


Q ss_pred             cEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccccccc---
Q 019722          116 NLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQ---  192 (336)
Q Consensus       116 d~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~~---  192 (336)
                      |++||+|+.....  ...++....+++|+.|+..+++++...-         ..+.|++||................   
T Consensus        74 d~Vih~aa~~~~~--~~~~~~~~~~~~Nv~gt~nll~~~~~~~---------~~~~i~~sS~~~~~~~~~~~~~~~~~~~  142 (338)
T d1orra_          74 DSCFHLAGQVAMT--TSIDNPCMDFEINVGGTLNLLEAVRQYN---------SNCNIIYSSTNKVYGDLEQYKYNETETR  142 (338)
T ss_dssp             SEEEECCCCCCHH--HHHHCHHHHHHHHHHHHHHHHHHHHHHC---------TTCEEEEEEEGGGGTTCTTSCEEECSSC
T ss_pred             ceEEeeccccccc--ccccChHHHHHHHHHHHHHHHHhhhccc---------cccccccccccccccccccccccccccc
Confidence            9999999875432  1234557889999999999998766542         2355666665444433222111110   


Q ss_pred             --------ccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCcc--chhHHHHHHHHHH
Q 019722          193 --------ISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRER--EGFITDLVFFLTS  262 (336)
Q Consensus       193 --------~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~--~~~~~~~~~~~~~  262 (336)
                              .............|+.+|...+.+.......+.     +....+.|..+..+.....  .............
T Consensus       143 ~~~~~~~~~~~~~~~~~~~~~y~~~k~~~e~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (338)
T d1orra_         143 YTCVDKPNGYDESTQLDFHSPYGCSKGAADQYMLDYARIFG-----LNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVE  217 (338)
T ss_dssp             EEETTCTTCBCTTSCCCCCHHHHHHHHHHHHHHHHHHHHHC-----CEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHH
T ss_pred             ccccccccCcccCCccccccccccccchhhhhhhhhhhccC-----cccccccccceeeccccccccccccchhhHHHHH
Confidence                    011112234567899999999999999888765     3444444433332222111  1112222222111


Q ss_pred             h------------------hcCChHHHHHHHHHHHhcCccccCCceeeccCcc--cccccCCCCHHHHHHHHHHHHHhhc
Q 019722          263 K------------------LLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNE--AWTSKLGSNSNEASRLWAASELLVS  322 (336)
Q Consensus       263 ~------------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~--~~~~~~~~~~~~~~~~w~~~~~~~~  322 (336)
                      .                  .....+|.+.+++.++..+.  ...|+.+.....  ....-        .++-+.+...++
T Consensus       218 ~~~~~~~~~~~~g~g~~~r~~~~v~D~~~~~~~~l~~~~--~~~~~~~~i~~~~~~~~s~--------~e~~~~i~~~~~  287 (338)
T d1orra_         218 IKNGINKPFTISGNGKQVRDVLHAEDMISLYFTALANVS--KIRGNAFNIGGTIVNSLSL--------LELFKLLEDYCN  287 (338)
T ss_dssp             HHTTCCCCEEEESSSCCEEECEEHHHHHHHHHHHHHTHH--HHTTCEEEESSCGGGEEEH--------HHHHHHHHHHHT
T ss_pred             HHhccCCceEEeCCCceeEeeecccchhhHHHHHHhccc--cccCccccccccccccccH--------HHHHHHHHHHHC
Confidence            0                  01235788888888876432  235665554332  22221        233445556666


Q ss_pred             cCCCCCCCCC
Q 019722          323 RDPKSVFDPL  332 (336)
Q Consensus       323 ~~~~~~~~p~  332 (336)
                      ..++..+.|.
T Consensus       288 ~~~~~~~~~~  297 (338)
T d1orra_         288 IDMRFTNLPV  297 (338)
T ss_dssp             CCCCEEEECC
T ss_pred             CCceeEeCCC
Confidence            6555444443

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.59  E-value=1.6e-14  Score=131.06  Aligned_cols=223  Identities=14%  Similarity=0.114  Sum_probs=140.2

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCCC
Q 019722           35 SVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLP  114 (336)
Q Consensus        35 gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  114 (336)
                      -|.||||||||.||.+++++|+++|++|.+++++.-.-......+. ...+.++.++.+|++|.+.+..+++       .
T Consensus         2 ~mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~~~~~~-~~~~~~i~~~~~Di~d~~~~~~~~~-------~   73 (346)
T d1oc2a_           2 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLE-AILGDRVELVVGDIADAELVDKLAA-------K   73 (346)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTG-GGCSSSEEEEECCTTCHHHHHHHHT-------T
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCccccHHHHH-HhhcCCeEEEEccCCCHHHHHHHHh-------h
Confidence            3789999999999999999999999865555432100000000111 1124689999999999999988764       5


Q ss_pred             ccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCcccccc--CCcccccc-
Q 019722          115 LNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFS--GDMIRYLG-  191 (336)
Q Consensus       115 id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~--~~~~~~~~-  191 (336)
                      .|.++|.|+.....  ....+..+.+++|+.+...++..+...          +.++|++||.......  .+...... 
T Consensus        74 ~~~v~~~a~~~~~~--~~~~~~~~~~~~N~~g~~nll~~~~~~----------~~k~i~~ss~~vyg~~~~~~~~~~~~~  141 (346)
T d1oc2a_          74 ADAIVHYAAESHND--NSLNDPSPFIHTNFIGTYTLLEAARKY----------DIRFHHVSTDEVYGDLPLREDLPGHGE  141 (346)
T ss_dssp             CSEEEECCSCCCHH--HHHHCCHHHHHHHTHHHHHHHHHHHHH----------TCEEEEEEEGGGGCCBCCGGGSTTTTC
T ss_pred             hhhhhhhhhccccc--chhhCcccceeeehHhHHhhhhhhccc----------cccccccccceEecccCcccccccccc
Confidence            78889998865432  123445678999999999998766443          2477777775432110  01110000 


Q ss_pred             ---cccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHHHHHHHHh-----
Q 019722          192 ---QISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSK-----  263 (336)
Q Consensus       192 ---~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~-----  263 (336)
                         ..........+...|+.+|.+.+.+++.+.++.   +  +++..+.|+.+.+|...... ............     
T Consensus       142 ~~~~~~~e~~~~~p~s~Y~~sK~~~E~~~~~~~~~~---~--i~~~ilR~~~vyGp~~~~~~-~~~~~i~~~~~~~~~~i  215 (346)
T d1oc2a_         142 GPGEKFTAETNYNPSSPYSSTKAASDLIVKAWVRSF---G--VKATISNCSNNYGPYQHIEK-FIPRQITNILAGIKPKL  215 (346)
T ss_dssp             STTSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---C--CEEEEEEECCEESTTCCTTS-HHHHHHHHHHHTCCCEE
T ss_pred             CcccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHc---C--CCEEEEeecceeCCCCCccc-hhHHHHHHHHcCCceeE
Confidence               011111223344679999999999999988775   3  99999999999987543322 222222222111     


Q ss_pred             --------hcCChHHHHHHHHHHHhcCc
Q 019722          264 --------LLKTIPQGAATTCYVAIHPR  283 (336)
Q Consensus       264 --------~~~~~~~~a~~~~~l~~~~~  283 (336)
                              .....+|.+.+++.++.++.
T Consensus       216 ~~~g~~~r~~i~v~D~a~a~~~~~~~~~  243 (346)
T d1oc2a_         216 YGEGKNVRDWIHTNDHSTGVWAILTKGR  243 (346)
T ss_dssp             ETTSCCEEECEEHHHHHHHHHHHHHHCC
T ss_pred             eCCCCccccccchhhHHHHHHHHHhhcc
Confidence                    11234788888887776443

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.59  E-value=2.5e-14  Score=130.47  Aligned_cols=255  Identities=12%  Similarity=-0.015  Sum_probs=161.3

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCC
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNL  113 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  113 (336)
                      ++..+|||||+|.||.+++++|+++|++|+++++......      ...  .....+..+|+.+.+.+..+++       
T Consensus        14 ~nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~------~~~--~~~~~~~~~D~~~~~~~~~~~~-------   78 (363)
T d2c5aa1          14 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHM------TED--MFCDEFHLVDLRVMENCLKVTE-------   78 (363)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSS------CGG--GTCSEEEECCTTSHHHHHHHHT-------
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccch------hhh--cccCcEEEeechhHHHHHHHhh-------
Confidence            5667999999999999999999999999999986543210      000  1345778889999888776654       


Q ss_pred             CccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccccccc-
Q 019722          114 PLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQ-  192 (336)
Q Consensus       114 ~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~~-  192 (336)
                      .+|++||.|+...... ...+.....+.+|+.++..++.++...-         -.++|++||........ ..+..+. 
T Consensus        79 ~~d~Vih~a~~~~~~~-~~~~~~~~~~~~n~~gt~~ll~~~~~~~---------vk~~i~~SS~~~~~~~~-~~~~~~~~  147 (363)
T d2c5aa1          79 GVDHVFNLAADMGGMG-FIQSNHSVIMYNNTMISFNMIEAARING---------IKRFFYASSACIYPEFK-QLETTNVS  147 (363)
T ss_dssp             TCSEEEECCCCCCCHH-HHTTCHHHHHHHHHHHHHHHHHHHHHTT---------CSEEEEEEEGGGSCGGG-SSSSSSCE
T ss_pred             cCCeEeeccccccccc-ccccccccccccccchhhHHHHhHHhhC---------ccccccccccccccccc-cccccccc
Confidence            6899999998654321 1235567788899999988888766642         24899999965443211 1111111 


Q ss_pred             -ccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccc---hhH-HHHHHHHHH-----
Q 019722          193 -ISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTRERE---GFI-TDLVFFLTS-----  262 (336)
Q Consensus       193 -~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~---~~~-~~~~~~~~~-----  262 (336)
                       ...+..+..+...|+.+|.+.+.+++.+.++.+     +.+..+.|+.+.++......   ... .........     
T Consensus       148 ~~~~e~~~~~p~~~Yg~sK~~~E~~~~~~~~~~g-----l~~~ilR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (363)
T d2c5aa1         148 LKESDAWPAEPQDAFGLEKLATEELCKHYNKDFG-----IECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFE  222 (363)
T ss_dssp             ECGGGGSSBCCSSHHHHHHHHHHHHHHHHHHHHC-----CEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEE
T ss_pred             cccccCCcCCCCCHHHHHHHHHHHHHHHHHHHhC-----CCEEEEEeeeEeccCCccccccccccccccccccccccccc
Confidence             111111223355799999999999999887763     99999999999987543221   111 111111110     


Q ss_pred             --------hhcCChHHHHHHHHHHHhcCccccCCceeeccCcccccccCCCCHHHHHHHHHHHHHhhccCCCCCCCCC
Q 019722          263 --------KLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWTSKLGSNSNEASRLWAASELLVSRDPKSVFDPL  332 (336)
Q Consensus       263 --------~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~p~  332 (336)
                              ......+|.+.+++.++..+     .|..++..+....+.        .++-+.+..+++...+..+.|.
T Consensus       223 ~~g~g~~~rd~i~v~D~~~~~~~~~~~~-----~~~~~ni~~~~~~s~--------~~l~~~i~~~~g~~~~i~~~~~  287 (363)
T d2c5aa1         223 MWGDGLQTRSFTFIDECVEGVLRLTKSD-----FREPVNIGSDEMVSM--------NEMAEMVLSFEEKKLPIHHIPG  287 (363)
T ss_dssp             EESCSCCEECCEEHHHHHHHHHHHHHSS-----CCSCEEECCCCCEEH--------HHHHHHHHHTTTCCCCEEEECC
T ss_pred             ccCCCCeEEEEeehhHHHHHHHHHHhCC-----CCCeEEEecCCcccH--------HHHHHHHHHHhCCCCceEeCCC
Confidence                    01233577888888877532     244455555544442        4555556666666655544443

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=99.56  E-value=5.8e-13  Score=122.24  Aligned_cols=192  Identities=13%  Similarity=0.102  Sum_probs=130.6

Q ss_pred             CEEEEeCCCChHHHHHHHHHHH-CCCEEEEeeC---------ChHHHHHHHHHHHhh------CCCCceEEEeccCCCHH
Q 019722           36 VTAIITGATSGIGAETARVLAK-RGARLVLPAR---------SLKAAEEAKARLASD------CPGSDIVVLPLDLSSLS   99 (336)
Q Consensus        36 k~~lItGgs~gIG~aia~~L~~-~G~~V~~~~r---------~~~~~~~~~~~l~~~------~~~~~~~~~~~Dl~~~~   99 (336)
                      -.||||||+|.||++++++|++ .|++|+++++         ..+..++....+...      ..+.++.++.+|++|.+
T Consensus         3 MKVLITG~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~   82 (383)
T d1gy8a_           3 MRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNED   82 (383)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCHH
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHhCCCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECcccCHH
Confidence            3689999999999999999986 6899999863         111122232333221      12356889999999999


Q ss_pred             HHHHHHHHHHhcCCCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCcc
Q 019722          100 SVRNFVSQFHSLNLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIH  179 (336)
Q Consensus       100 ~v~~~~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~  179 (336)
                      .++++++.    ..++|+|||.|+.....  ...+.....+.+|+.+...++.++....         ..+++++++...
T Consensus        83 ~l~~~~~~----~~~~d~ViH~Aa~~~~~--~~~~~~~~~~~~N~~~t~~~l~~~~~~~---------~~~~~~~~s~~~  147 (383)
T d1gy8a_          83 FLNGVFTR----HGPIDAVVHMCAFLAVG--ESVRDPLKYYDNNVVGILRLLQAMLLHK---------CDKIIFSSSAAI  147 (383)
T ss_dssp             HHHHHHHH----SCCCCEEEECCCCCCHH--HHHHCHHHHHHHHHHHHHHHHHHHHHTT---------CCEEEEEEEGGG
T ss_pred             Hhhhhhhc----cceeehhhccccccccc--ccccccccccccccccccccchhhhccC---------Cccccccccccc
Confidence            99888865    34789999999975432  1234455678899999999887777532         247777766544


Q ss_pred             ccccCCc-ccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCC
Q 019722          180 SWFSGDM-IRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTR  247 (336)
Q Consensus       180 ~~~~~~~-~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~  247 (336)
                      ....... ......+...+....+...|+.+|.+.+.+++.+...+.     +.+.++.|+.+..+...
T Consensus       148 ~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~g-----l~~~~lR~~~vyG~~~~  211 (383)
T d1gy8a_         148 FGNPTMGSVSTNAEPIDINAKKSPESPYGESKLIAERMIRDCAEAYG-----IKGICLRYFNACGAHED  211 (383)
T ss_dssp             TBSCCC-----CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHHC-----CEEEEEEECEEECCCTT
T ss_pred             ccccccccccccccccccccCCCCCCHHHhhHhHHHHHHHHHHHHhC-----CCEEEEecceeeccCcc
Confidence            3321111 111111122223345567899999999999999887653     89999999999877554

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=99.54  E-value=7.2e-14  Score=125.38  Aligned_cols=229  Identities=17%  Similarity=0.103  Sum_probs=150.4

Q ss_pred             EEEEeCCCChHHHHHHHHHHHCCCEE------EEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHh
Q 019722           37 TAIITGATSGIGAETARVLAKRGARL------VLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHS  110 (336)
Q Consensus        37 ~~lItGgs~gIG~aia~~L~~~G~~V------~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  110 (336)
                      .+|||||+|.||.+++++|+++|+.|      +.+++.......  ..+.......++.++.+|.++.........    
T Consensus         2 kIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~--~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~----   75 (322)
T d1r6da_           2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNR--ANLAPVDADPRLRFVHGDIRDAGLLARELR----   75 (322)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCG--GGGGGGTTCTTEEEEECCTTCHHHHHHHTT----
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccccH--hHhhhhhcCCCeEEEEeccccchhhhcccc----
Confidence            48999999999999999999999744      444322111000  011111125689999999999987765432    


Q ss_pred             cCCCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccccc
Q 019722          111 LNLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYL  190 (336)
Q Consensus       111 ~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~  190 (336)
                         .+|+++|+|+.....  ......++.+++|+.++..+++++...    +     ..++|++||.... +.....++ 
T Consensus        76 ---~~d~vi~~a~~~~~~--~~~~~~~~~~~~N~~gt~~ll~~~~~~----~-----~~~~I~~Ss~~~y-g~~~~~~~-  139 (322)
T d1r6da_          76 ---GVDAIVHFAAESHVD--RSIAGASVFTETNVQGTQTLLQCAVDA----G-----VGRVVHVSTNQVY-GSIDSGSW-  139 (322)
T ss_dssp             ---TCCEEEECCSCCCHH--HHHHCCHHHHHHHTHHHHHHHHHHHHT----T-----CCEEEEEEEGGGG-CCCSSSCB-
T ss_pred             ---ccceEEeeccccccc--ccccchHHHhhhhHHHHHHHHHHHHHc----C-----CceEEEeecceee-cCCCCCCC-
Confidence               789999999864332  234556778899999999999888643    1     3589998886433 32222222 


Q ss_pred             ccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHHHHHHHHh-------
Q 019722          191 GQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSK-------  263 (336)
Q Consensus       191 ~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~-------  263 (336)
                          +++....+...|+.+|.+.+.+++.++++.   +  +++..+.|+.+.++.... ......+.......       
T Consensus       140 ----~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~--~~~~~lR~~~vyGp~~~~-~~~i~~~i~~~~~~~~i~v~~  209 (322)
T d1r6da_         140 ----TESSPLEPNSPYAASKAGSDLVARAYHRTY---G--LDVRITRCCNNYGPYQHP-EKLIPLFVTNLLDGGTLPLYG  209 (322)
T ss_dssp             ----CTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---C--CCEEEEEECEEECTTCCT-TSHHHHHHHHHHTTCCEEEET
T ss_pred             ----CCCCCCCCCCHHHHHHHHHHHHHHHHHHHh---C--CCEEEEEeeeEECcCCCc-CcHHHHHHHHHHcCCCcEEec
Confidence                222234445679999999999999998775   3  999999999999875432 22333333332221       


Q ss_pred             ------hcCChHHHHHHHHHHHhcCccccCCceeeccCcccccc
Q 019722          264 ------LLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWTS  301 (336)
Q Consensus       264 ------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~~  301 (336)
                            .....+|+|.+++.++.++.    .|..++.......+
T Consensus       210 ~g~~~r~~i~v~D~a~ai~~~~~~~~----~~~~~ni~~~~~~s  249 (322)
T d1r6da_         210 DGANVREWVHTDDHCRGIALVLAGGR----AGEIYHIGGGLELT  249 (322)
T ss_dssp             TSCCEEEEEEHHHHHHHHHHHHHHCC----TTCEEEECCCCEEE
T ss_pred             CCCeEEccEEHHHHHHHHHHHHhCCC----CCCeeEEeecccch
Confidence                  11245888999999987544    46565555544333

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.49  E-value=1.4e-13  Score=117.23  Aligned_cols=214  Identities=13%  Similarity=0.026  Sum_probs=133.3

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHCCC--EEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCC
Q 019722           36 VTAIITGATSGIGAETARVLAKRGA--RLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNL  113 (336)
Q Consensus        36 k~~lItGgs~gIG~aia~~L~~~G~--~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  113 (336)
                      ++||||||+|.||++++++|+++|+  .|+.+.|++++....         ..++.++.+|+++.+++.++++       
T Consensus         4 ~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~~---------~~~~~~~~~d~~~~~~~~~~~~-------   67 (252)
T d2q46a1           4 PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI---------GGEADVFIGDITDADSINPAFQ-------   67 (252)
T ss_dssp             CEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHHT---------TCCTTEEECCTTSHHHHHHHHT-------
T ss_pred             CEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHhc---------cCCcEEEEeeeccccccccccc-------
Confidence            7999999999999999999999996  466677887654321         3578899999999999888775       


Q ss_pred             CccEEEEcccCCCCC-----------CCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccc
Q 019722          114 PLNLLINNAGKFAHQ-----------HAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWF  182 (336)
Q Consensus       114 ~id~lv~nAg~~~~~-----------~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~  182 (336)
                      .+|.+||+|+.....           .......+.....+|+.+...++.......         .+.....++......
T Consensus        68 ~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~s~~~~~~~  138 (252)
T d2q46a1          68 GIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAG---------VKHIVVVGSMGGTNP  138 (252)
T ss_dssp             TCSEEEECCCCCCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHT---------CSEEEEEEETTTTCT
T ss_pred             cceeeEEEEeeccccccccchhhhhhcccccccchhhhccccccceeecccccccc---------ccccccccccccCCC
Confidence            689999999865421           112233456677889888887776555433         356777766543322


Q ss_pred             cCCcccccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHHHH-HHH
Q 019722          183 SGDMIRYLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVF-FLT  261 (336)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~-~~~  261 (336)
                      .....            ......|...+..    ...+..   ..+  +++..++||.+..+.............. ...
T Consensus       139 ~~~~~------------~~~~~~~~~~~~~----~~~~~~---~~~--~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~  197 (252)
T d2q46a1         139 DHPLN------------KLGNGNILVWKRK----AEQYLA---DSG--TPYTIIRAGGLLDKEGGVRELLVGKDDELLQT  197 (252)
T ss_dssp             TCGGG------------GGGGCCHHHHHHH----HHHHHH---HSS--SCEEEEEECEEECSCTTSSCEEEESTTGGGGS
T ss_pred             Ccccc------------cccccchhhhhhh----hhhhhh---ccc--ccceeecceEEECCCcchhhhhhccCcccccC
Confidence            10000            1111223333322    222222   234  8999999999987754332110000000 000


Q ss_pred             HhhcCChHHHHHHHHHHHhcCccccCCceeeccCccc
Q 019722          262 SKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEA  298 (336)
Q Consensus       262 ~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  298 (336)
                      .....+.+|+|.+++.++.++..   .|+.|+..+..
T Consensus       198 ~~~~i~~~Dva~a~~~~l~~~~~---~g~~~~i~~~~  231 (252)
T d2q46a1         198 DTKTVPRADVAEVCIQALLFEEA---KNKAFDLGSKP  231 (252)
T ss_dssp             SCCEEEHHHHHHHHHHHTTCGGG---TTEEEEEEECC
T ss_pred             CCCeEEHHHHHHHHHHHhCCccc---cCcEEEEeeCC
Confidence            11234578999999999886654   57777666543

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.47  E-value=5.3e-14  Score=120.53  Aligned_cols=194  Identities=14%  Similarity=0.069  Sum_probs=130.2

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCC--EEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHH
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGA--RLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQF  108 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~--~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~  108 (336)
                      +.|++|++|||||||.||.+++++|+++|.  +|++++|++......      .  ..++....+|+.+.+++...+   
T Consensus        10 ~~m~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~------~--~~~i~~~~~D~~~~~~~~~~~---   78 (232)
T d2bkaa1          10 FRMQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEE------A--YKNVNQEVVDFEKLDDYASAF---   78 (232)
T ss_dssp             HHHTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSG------G--GGGCEEEECCGGGGGGGGGGG---
T ss_pred             hCCCCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhccc------c--cceeeeeeecccccccccccc---
Confidence            347889999999999999999999999995  899999976432210      0  246777778887765544333   


Q ss_pred             HhcCCCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccc
Q 019722          109 HSLNLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIR  188 (336)
Q Consensus       109 ~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~  188 (336)
                          ...|++||++|...     ..........+|+.++..+++.+..    .+     -.++|++|+.....       
T Consensus        79 ----~~~d~vi~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~a~~----~~-----v~~fi~~Ss~~~~~-------  133 (232)
T d2bkaa1          79 ----QGHDVGFCCLGTTR-----GKAGAEGFVRVDRDYVLKSAELAKA----GG-----CKHFNLLSSKGADK-------  133 (232)
T ss_dssp             ----SSCSEEEECCCCCH-----HHHHHHHHHHHHTHHHHHHHHHHHH----TT-----CCEEEEECCTTCCT-------
T ss_pred             ----cccccccccccccc-----cccchhhhhhhcccccceeeecccc----cC-----ccccccCCcccccc-------
Confidence                36899999998632     2344566788899888888877643    22     35899999875432       


Q ss_pred             ccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcE-EEEEeeCCceeCCCCCccchhHHHHHHHHH------
Q 019722          189 YLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANV-TVNCVHPGIVRTRLTREREGFITDLVFFLT------  261 (336)
Q Consensus       189 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I-~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~------  261 (336)
                                  .....|+.+|...+...+.       .+  . ++..+.||.+..+......  .........      
T Consensus       134 ------------~~~~~Y~~~K~~~E~~l~~-------~~--~~~~~IlRP~~i~G~~~~~~~--~~~~~~~~~~~~~~~  190 (232)
T d2bkaa1         134 ------------SSNFLYLQVKGEVEAKVEE-------LK--FDRYSVFRPGVLLCDRQESRP--GEWLVRKFFGSLPDS  190 (232)
T ss_dssp             ------------TCSSHHHHHHHHHHHHHHT-------TC--CSEEEEEECCEEECTTGGGSH--HHHHHHHHHCSCCTT
T ss_pred             ------------CccchhHHHHHHhhhcccc-------cc--ccceEEecCceeecCCCcCcH--HHHHHHHHhhccCCc
Confidence                        1233599999888765433       22  3 4677899999887543321  111111111      


Q ss_pred             --HhhcCChHHHHHHHHHHHhcCc
Q 019722          262 --SKLLKTIPQGAATTCYVAIHPR  283 (336)
Q Consensus       262 --~~~~~~~~~~a~~~~~l~~~~~  283 (336)
                        .......+++|.+++.++..+.
T Consensus       191 ~~~~~~I~~~dvA~a~i~~~~~~~  214 (232)
T d2bkaa1         191 WASGHSVPVVTVVRAMLNNVVRPR  214 (232)
T ss_dssp             GGGGTEEEHHHHHHHHHHHHTSCC
T ss_pred             ccCCCeEEHHHHHHHHHHHHhcCc
Confidence              1112345889999999887554

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=99.28  E-value=2.3e-12  Score=113.92  Aligned_cols=233  Identities=9%  Similarity=0.000  Sum_probs=134.1

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHH----HHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHh
Q 019722           35 SVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAE----EAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHS  110 (336)
Q Consensus        35 gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~----~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  110 (336)
                      .+++|||||||.||++++++|+++|++|+++.|+.....    +....+.    ..++.++++|+++.+.+.++++    
T Consensus         3 k~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~----~~~v~~v~~d~~d~~~~~~~~~----   74 (312)
T d1qyda_           3 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFK----QLGAKLIEASLDDHQRLVDALK----   74 (312)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHH----TTTCEEECCCSSCHHHHHHHHT----
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhHHHHHhhhc----cCCcEEEEeecccchhhhhhcc----
Confidence            356999999999999999999999999999999753211    1122221    4578999999999998887765    


Q ss_pred             cCCCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccccc
Q 019722          111 LNLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYL  190 (336)
Q Consensus       111 ~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~  190 (336)
                         ..+.++++++......             |..+...++.++    .+..     ..+.++.||.......       
T Consensus        75 ---~~~~~~~~~~~~~~~~-------------~~~~~~~~l~~a----~~~~-----~~~~v~~Ss~g~~~~~-------  122 (312)
T d1qyda_          75 ---QVDVVISALAGGVLSH-------------HILEQLKLVEAI----KEAG-----NIKRFLPSEFGMDPDI-------  122 (312)
T ss_dssp             ---TCSEEEECCCCSSSST-------------TTTTHHHHHHHH----HHSC-----CCSEEECSCCSSCTTS-------
T ss_pred             ---Ccchhhhhhhhccccc-------------chhhhhHHHHHH----HHhc-----CCcEEEEeeccccCCC-------
Confidence               6788888887533221             111222222222    2221     2466666664322110       


Q ss_pred             ccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhH-------HHH---HHHH
Q 019722          191 GQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFI-------TDL---VFFL  260 (336)
Q Consensus       191 ~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~-------~~~---~~~~  260 (336)
                           ..........|..+|...+.+    ..   ..+  +.+..+.|+.+..+.........       ...   ...-
T Consensus       123 -----~~~~~~~~~~~~~~~~~~~~~----~~---~~~--~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~  188 (312)
T d1qyda_         123 -----MEHALQPGSITFIDKRKVRRA----IE---AAS--IPYTYVSSNMFAGYFAGSLAQLDGHMMPPRDKVLIYGDGN  188 (312)
T ss_dssp             -----CCCCCSSTTHHHHHHHHHHHH----HH---HTT--CCBCEEECCEEHHHHTTTSSCTTCCSSCCSSEECCBTTSC
T ss_pred             -----cccccchhhhhhHHHHHHHHh----hc---ccc--cceEEeccceeecCCccchhhHHHHhhhcccccccccccc
Confidence                 001122333455555554432    22   223  77788888888543221110000       000   0000


Q ss_pred             HHhhcCChHHHHHHHHHHHhcCccccCCceeeccCcccccccCCCCHHHHHHHHHHHHHhhccCCCCCCCC
Q 019722          261 TSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWTSKLGSNSNEASRLWAASELLVSRDPKSVFDP  331 (336)
Q Consensus       261 ~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~p  331 (336)
                      .......++|+|.+++.++..+..  .++.++...+....+-        +++++.+.++++...+..+.|
T Consensus       189 ~~~~~i~v~Dva~a~~~~l~~~~~--~~~~~~~~~~~~~~s~--------~e~~~~~~~~~g~~~~~~~i~  249 (312)
T d1qyda_         189 VKGIWVDEDDVGTYTIKSIDDPQT--LNKTMYIRPPMNILSQ--------KEVIQIWERLSEQNLDKIYIS  249 (312)
T ss_dssp             SEEEEECHHHHHHHHHHHTTCGGG--SSSEEECCCGGGEEEH--------HHHHHHHHHHHTCCCEECCBC
T ss_pred             cccceeeHHHHHHHHHHHhcCccc--cCceEEEeCCCcCCCH--------HHHHHHHHHHHCCCCeEEECC
Confidence            011235668999999999876543  3445555555555553        788888888888776655544

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=99.27  E-value=3.9e-11  Score=104.51  Aligned_cols=216  Identities=17%  Similarity=0.166  Sum_probs=135.3

Q ss_pred             EEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCCCccE
Q 019722           38 AIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLPLNL  117 (336)
Q Consensus        38 ~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~  117 (336)
                      +|||||||.||.+++++|.++|++|+.++|+.                       +|++|..+++++++..     ++|+
T Consensus         4 IlItGasGfiG~~l~~~L~~~g~~Vi~~~r~~-----------------------~D~~d~~~~~~~l~~~-----~~d~   55 (281)
T d1vl0a_           4 ILITGANGQLGREIQKQLKGKNVEVIPTDVQD-----------------------LDITNVLAVNKFFNEK-----KPNV   55 (281)
T ss_dssp             EEEESTTSHHHHHHHHHHTTSSEEEEEECTTT-----------------------CCTTCHHHHHHHHHHH-----CCSE
T ss_pred             EEEECCCCHHHHHHHHHHHhCCCEEEEeechh-----------------------ccCCCHHHHHHHHHHc-----CCCE
Confidence            89999999999999999999999999998752                       4899999999888754     6899


Q ss_pred             EEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcccccccccCCC
Q 019722          118 LINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRNK  197 (336)
Q Consensus       118 lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~~~~~~~  197 (336)
                      +||+|+.....  ......+..+..|+.....+.......          ...++..||... +......++     .+.
T Consensus        56 vih~a~~~~~~--~~~~~~~~~~~~n~~~~~~~~~~~~~~----------~~~~~~~ss~~v-~~~~~~~~~-----~e~  117 (281)
T d1vl0a_          56 VINCAAHTAVD--KCEEQYDLAYKINAIGPKNLAAAAYSV----------GAEIVQISTDYV-FDGEAKEPI-----TEF  117 (281)
T ss_dssp             EEECCCCCCHH--HHHHCHHHHHHHHTHHHHHHHHHHHHH----------TCEEEEEEEGGG-SCSCCSSCB-----CTT
T ss_pred             EEeeccccccc--cccccchhhcccccccccccccccccc----------ccccccccccee-eeccccccc-----ccc
Confidence            99999864322  122334556666766666655544332          245566655433 222211111     122


Q ss_pred             CCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchhHHHHHHHHHHh-----------hcC
Q 019722          198 SHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGFITDLVFFLTSK-----------LLK  266 (336)
Q Consensus       198 ~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~-----------~~~  266 (336)
                      ........|+.+|...+.+.+.    .   +  .+...+.|+.+..+-...    ...........           ...
T Consensus       118 ~~~~~~~~~~~~k~~~e~~~~~----~---~--~~~~i~R~~~vyG~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~i  184 (281)
T d1vl0a_         118 DEVNPQSAYGKTKLEGENFVKA----L---N--PKYYIVRTAWLYGDGNNF----VKTMINLGKTHDELKVVHDQVGTPT  184 (281)
T ss_dssp             SCCCCCSHHHHHHHHHHHHHHH----H---C--SSEEEEEECSEESSSSCH----HHHHHHHHHHCSEEEEESSCEECCE
T ss_pred             ccccchhhhhhhhhHHHHHHHH----h---C--CCccccceeEEeCCCccc----ccchhhhhccCCceeecCCceeccc
Confidence            2244556799999887765533    2   2  567779999998875432    22222222211           123


Q ss_pred             ChHHHHHHHHHHHhcCccccCCceeeccCcccccccCCCCHHHHHHHHHHHHHhhccCC
Q 019722          267 TIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWTSKLGSNSNEASRLWAASELLVSRDP  325 (336)
Q Consensus       267 ~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~  325 (336)
                      ..+|.+.++..++..+    .+|.+...++. ..+.        .++.+.+.+.++...
T Consensus       185 ~v~D~~~~~~~~~~~~----~~g~~~~~~~~-~~s~--------~e~~~~i~~~~g~~~  230 (281)
T d1vl0a_         185 STVDLARVVLKVIDEK----NYGTFHCTCKG-ICSW--------YDFAVEIFRLTGIDV  230 (281)
T ss_dssp             EHHHHHHHHHHHHHHT----CCEEEECCCBS-CEEH--------HHHHHHHHHHHCCCC
T ss_pred             hhhhhhhhhhhhhhhc----ccCceeEeCCC-ccch--------HHHHHHHHHHhCCCc
Confidence            5688899999988643    25655544443 3332        555566666666543

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=99.12  E-value=9.1e-11  Score=102.69  Aligned_cols=83  Identities=23%  Similarity=0.245  Sum_probs=63.4

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHH--HHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhc
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAE--EAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSL  111 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~--~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  111 (336)
                      +.|++|||||||.||++++++|+++|++|++++|+.....  +....+.... ...+.++.+|+.+.......++     
T Consensus         2 ~kkKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~-----   75 (307)
T d1qyca_           2 SRSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFK-ASGANIVHGSIDDHASLVEAVK-----   75 (307)
T ss_dssp             CCCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHH-TTTCEEECCCTTCHHHHHHHHH-----
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhHHHHHHhhc-cCCcEEEEeecccchhhhhhhh-----
Confidence            4688999999999999999999999999999998754321  1111122211 3568899999999998877775     


Q ss_pred             CCCccEEEEcccC
Q 019722          112 NLPLNLLINNAGK  124 (336)
Q Consensus       112 ~~~id~lv~nAg~  124 (336)
                        ..+.++++++.
T Consensus        76 --~~~~vi~~~~~   86 (307)
T d1qyca_          76 --NVDVVISTVGS   86 (307)
T ss_dssp             --TCSEEEECCCG
T ss_pred             --hceeeeecccc
Confidence              57889988874

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=99.11  E-value=9.5e-11  Score=105.76  Aligned_cols=229  Identities=17%  Similarity=0.060  Sum_probs=127.2

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHH-HHHHHHHHHhcC
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSS-VRNFVSQFHSLN  112 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~-v~~~~~~~~~~~  112 (336)
                      +.|+++||||||.||.+++++|+++|++|+++.|+.++...  ..+..   ..++.++++|+.|..+ ++.++       
T Consensus         2 ~kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~--~~~~~---~~~v~~~~gD~~d~~~~~~~a~-------   69 (350)
T d1xgka_           2 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIA--EELQA---IPNVTLFQGPLLNNVPLMDTLF-------   69 (350)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHH--HHHHT---STTEEEEESCCTTCHHHHHHHH-------
T ss_pred             CCCEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcchhhh--hhhcc---cCCCEEEEeeCCCcHHHHHHHh-------
Confidence            46999999999999999999999999999999998765432  22222   3578999999998654 33333       


Q ss_pred             CCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccccccc
Q 019722          113 LPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQ  192 (336)
Q Consensus       113 ~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~~  192 (336)
                      ...|.++.+......      .        ++.....++.+    ..+.+     ..+++..||........        
T Consensus        70 ~~~~~~~~~~~~~~~------~--------~~~~~~~~~~a----a~~ag-----v~~~v~~Ss~~~~~~~~--------  118 (350)
T d1xgka_          70 EGAHLAFINTTSQAG------D--------EIAIGKDLADA----AKRAG-----TIQHYIYSSMPDHSLYG--------  118 (350)
T ss_dssp             TTCSEEEECCCSTTS------C--------HHHHHHHHHHH----HHHHS-----CCSEEEEEECCCGGGTS--------
T ss_pred             cCCceEEeecccccc------h--------hhhhhhHHHHH----HHHhC-----CCceEEEeeccccccCC--------
Confidence            367887776543211      1        11112223333    23332     24677777754332211        


Q ss_pred             ccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccchh-----HHHHHHH--------
Q 019722          193 ISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREGF-----ITDLVFF--------  259 (336)
Q Consensus       193 ~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~~-----~~~~~~~--------  259 (336)
                             ......|..+|...+.+.+.       .+  +....+.|+....+........     .......        
T Consensus       119 -------~~~~~~~~~~k~~~~~~~~~-------~~--~~~~~vr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (350)
T d1xgka_         119 -------PWPAVPMWAPKFTVENYVRQ-------LG--LPSTFVYAGIYNNNFTSLPYPLFQMELMPDGTFEWHAPFDPD  182 (350)
T ss_dssp             -------SCCCCTTTHHHHHHHHHHHT-------SS--SCEEEEEECEEGGGCBSSSCSSCBEEECTTSCEEEEESSCTT
T ss_pred             -------cccchhhhhhHHHHHHHHHh-------hc--cCceeeeeceeeccccccccccccccccccccceeeecccCC
Confidence                   11223455667665544332       22  6677788887654432211000     0000000        


Q ss_pred             HHHhhcCChHHHHHHHHHHHhcCccccCCceeeccCcccccccCCCCHHHHHHHHHHHHHhhccCCCCCCCC
Q 019722          260 LTSKLLKTIPQGAATTCYVAIHPRLVNVSGKYFADCNEAWTSKLGSNSNEASRLWAASELLVSRDPKSVFDP  331 (336)
Q Consensus       260 ~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~p  331 (336)
                      .........+|++..+..++..+ .....|+.+...+.. .+.        +++-+.+.+++|++......|
T Consensus       183 ~~~~~i~~~~Dva~~v~~~l~~~-~~~~~G~~~~~~g~~-~T~--------~eia~~l~~~~G~~v~~~~vp  244 (350)
T d1xgka_         183 IPLPWLDAEHDVGPALLQIFKDG-PQKWNGHRIALTFET-LSP--------VQVCAAFSRALNRRVTYVQVP  244 (350)
T ss_dssp             SCEEEECHHHHHHHHHHHHHHHC-HHHHTTCEEEECSEE-ECH--------HHHHHHHHHHHTSCEEEEECS
T ss_pred             CcceEEEeHHHHHHHHHHHHhCC-hhhcCCeEEEEeCCc-CCH--------HHHHHHHHHHHCCcceEEECC
Confidence            00000111357777777777533 234578888777653 342        566666667777665443333

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=99.10  E-value=1.6e-10  Score=101.16  Aligned_cols=140  Identities=20%  Similarity=0.164  Sum_probs=95.4

Q ss_pred             EEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCCCcc
Q 019722           37 TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLPLN  116 (336)
Q Consensus        37 ~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id  116 (336)
                      .+|||||+|.||.+++++|.++|. ++.++++..              .     +.+|++|.+.++++++..     ++|
T Consensus         2 KILItG~tGfiG~~l~~~L~~~g~-~v~~~~~~~--------------~-----~~~Dl~~~~~~~~~i~~~-----~~D   56 (298)
T d1n2sa_           2 NILLFGKTGQVGWELQRSLAPVGN-LIALDVHSK--------------E-----FCGDFSNPKGVAETVRKL-----RPD   56 (298)
T ss_dssp             EEEEECTTSHHHHHHHHHTTTTSE-EEEECTTCS--------------S-----SCCCTTCHHHHHHHHHHH-----CCS
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCC-EEEEECCCc--------------c-----ccCcCCCHHHHHHHHHHc-----CCC
Confidence            389999999999999999999985 444444321              0     347999999999988765     689


Q ss_pred             EEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCcccccccccCC
Q 019722          117 LLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQISRN  196 (336)
Q Consensus       117 ~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~~~~~~  196 (336)
                      +|||+||.....  ...+.....+.+|+.+...+++++...          +.+++++||...... ....++     .+
T Consensus        57 ~Vih~Aa~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~----------~~~~~~~ss~~~~~~-~~~~~~-----~E  118 (298)
T d1n2sa_          57 VIVNAAAHTAVD--KAESEPELAQLLNATSVEAIAKAANET----------GAWVVHYSTDYVFPG-TGDIPW-----QE  118 (298)
T ss_dssp             EEEECCCCCCHH--HHTTCHHHHHHHHTHHHHHHHHHHTTT----------TCEEEEEEEGGGSCC-CTTCCB-----CT
T ss_pred             EEEEeccccccc--ccccCccccccccccccccchhhhhcc----------ccccccccccccccC-CCCCCC-----cc
Confidence            999999965432  123444678889999988887776432          357777777654332 222211     12


Q ss_pred             CCCCChhhHhHHHHHHHHHHHHH
Q 019722          197 KSHYDATRAYALSKLANVLHTKE  219 (336)
Q Consensus       197 ~~~~~~~~~Y~~sK~a~~~l~~~  219 (336)
                      .....+...|+.+|.+.+.+.+.
T Consensus       119 ~~~~~p~~~y~~~k~~~e~~~~~  141 (298)
T d1n2sa_         119 TDATSPLNVYGKTKLAGEKALQD  141 (298)
T ss_dssp             TSCCCCSSHHHHHHHHHHHHHHH
T ss_pred             ccccCCCchHhhhhhhhhhhHHh
Confidence            22233456799999888765543

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.05  E-value=7.3e-10  Score=92.61  Aligned_cols=188  Identities=13%  Similarity=0.055  Sum_probs=115.2

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCC--EEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcC
Q 019722           35 SVTAIITGATSGIGAETARVLAKRGA--RLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLN  112 (336)
Q Consensus        35 gk~~lItGgs~gIG~aia~~L~~~G~--~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  112 (336)
                      -|++|||||||.||++++++|+++|+  +|+...|++..          .  ..++   ..+..+..++.      ....
T Consensus         2 ~KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~----------~--~~~~---~~~~~d~~~~~------~~~~   60 (212)
T d2a35a1           2 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA----------E--HPRL---DNPVGPLAELL------PQLD   60 (212)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC----------C--CTTE---ECCBSCHHHHG------GGCC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchh----------h--cccc---cccccchhhhh------hccc
Confidence            38999999999999999999999997  67777776321          0  1233   33444443321      1234


Q ss_pred             CCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccccccc
Q 019722          113 LPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQ  192 (336)
Q Consensus       113 ~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~~  192 (336)
                      ..+|.+|+++|.....    ...-+...++|+.++..+++++..    .+     -.++|++||..+..           
T Consensus        61 ~~~d~vi~~~g~~~~~----~~~~~~~~~~~~~~~~~~~~~a~~----~~-----v~~~i~~Ss~~~~~-----------  116 (212)
T d2a35a1          61 GSIDTAFCCLGTTIKE----AGSEEAFRAVDFDLPLAVGKRALE----MG-----ARHYLVVSALGADA-----------  116 (212)
T ss_dssp             SCCSEEEECCCCCHHH----HSSHHHHHHHHTHHHHHHHHHHHH----TT-----CCEEEEECCTTCCT-----------
T ss_pred             cchheeeeeeeeeccc----cccccccccchhhhhhhccccccc----cc-----cccccccccccccc-----------
Confidence            5789999999864221    122356788899988888876533    22     35899999865432           


Q ss_pred             ccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCCccch-hHHHH-HHHHH-HhhcCChH
Q 019722          193 ISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTREREG-FITDL-VFFLT-SKLLKTIP  269 (336)
Q Consensus       193 ~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~~~~~-~~~~~-~~~~~-~~~~~~~~  269 (336)
                              .....|..+|...|.+.+       ..+ .-++..++|+.+..+....... ..... ...+. .......+
T Consensus       117 --------~~~~~y~~~K~~~E~~l~-------~~~-~~~~~I~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  180 (212)
T d2a35a1         117 --------KSSIFYNRVKGELEQALQ-------EQG-WPQLTIARPSLLFGPREEFRLAEILAAPIARILPGKYHGIEAC  180 (212)
T ss_dssp             --------TCSSHHHHHHHHHHHHHT-------TSC-CSEEEEEECCSEESTTSCEEGGGGTTCCCC----CHHHHHHHH
T ss_pred             --------ccccchhHHHHHHhhhcc-------ccc-cccceeeCCcceeCCcccccHHHHHHHHHhhccCCCCcEEEHH
Confidence                    223469999988776543       222 0257788999998764332110 00000 00000 00113468


Q ss_pred             HHHHHHHHHHhcCc
Q 019722          270 QGAATTCYVAIHPR  283 (336)
Q Consensus       270 ~~a~~~~~l~~~~~  283 (336)
                      |.|.+++.++..+.
T Consensus       181 DvA~ai~~~~~~~~  194 (212)
T d2a35a1         181 DLARALWRLALEEG  194 (212)
T ss_dssp             HHHHHHHHHHTCCC
T ss_pred             HHHHHHHHHHcCCC
Confidence            89999999887443

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=98.93  E-value=1.5e-09  Score=95.14  Aligned_cols=170  Identities=12%  Similarity=0.067  Sum_probs=102.2

Q ss_pred             EEEeCCCChHHHHHHHHHHHCCC-EEEEeeCCh--HHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHh--cC
Q 019722           38 AIITGATSGIGAETARVLAKRGA-RLVLPARSL--KAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHS--LN  112 (336)
Q Consensus        38 ~lItGgs~gIG~aia~~L~~~G~-~V~~~~r~~--~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~--~~  112 (336)
                      +|||||+|.||.+++++|+++|+ .|+++++-.  .+....    .    .       .++.+........+....  .+
T Consensus         2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~~~~~~~----~----~-------~~~~~~~~~~~~~~~~~~~~~~   66 (307)
T d1eq2a_           2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNL----V----D-------LNIADYMDKEDFLIQIMAGEEF   66 (307)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGGHHH----H----T-------SCCSEEEEHHHHHHHHHTTCCC
T ss_pred             EEEecCccHHHHHHHHHHHhCCCCeEEEEECCCCcchhhcc----c----c-------cchhhhccchHHHHHHhhhhcc
Confidence            79999999999999999999997 577775322  111111    1    1       112221112223333322  34


Q ss_pred             CCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccccccc
Q 019722          113 LPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIRYLGQ  192 (336)
Q Consensus       113 ~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~~~~~  192 (336)
                      ..++++++.|+....    .....+.....|+.+...+++++...    .      -++|+.||......+....     
T Consensus        67 ~~~~~i~~~aa~~~~----~~~~~~~~~~~~~~~~~~~l~~~~~~----~------i~~v~~ss~~~~~~~~~~~-----  127 (307)
T d1eq2a_          67 GDVEAIFHEGACSST----TEWDGKYMMDNNYQYSKELLHYCLER----E------IPFLYASSAATYGGRTSDF-----  127 (307)
T ss_dssp             SSCCEEEECCSCCCT----TCCCHHHHHHHTHHHHHHHHHHHHHH----T------CCEEEEEEGGGGTTCCSCB-----
T ss_pred             cchhhhhhhcccccc----cccccccccccccccccccccccccc----c------ccccccccccccccccccc-----
Confidence            678899998875432    22344566777788877776654433    1      3455565554443322111     


Q ss_pred             ccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEeeCCceeCCCCC
Q 019722          193 ISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVHPGIVRTRLTR  247 (336)
Q Consensus       193 ~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~PG~v~T~~~~  247 (336)
                       .+......+...|+.+|.+.+.+++.+..+.   +  +.+..+.|..+..+...
T Consensus       128 -~~~~~~~~~~~~Y~~~K~~~e~~~~~~~~~~---~--~~~~~~r~~~vyGp~~~  176 (307)
T d1eq2a_         128 -IESREYEKPLNVYGYSKFLFDEYVRQILPEA---N--SQIVGFRYFNVYGPREG  176 (307)
T ss_dssp             -CSSGGGCCCSSHHHHHHHHHHHHHHHHGGGC---S--SCEEEEEECEEESSSCG
T ss_pred             -cccccccccccccccccchhhhhcccccccc---c--cccccccceeEeecccc
Confidence             1111113445679999999999988876543   3  78889999999887543

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=98.74  E-value=5.8e-13  Score=110.26  Aligned_cols=46  Identities=26%  Similarity=0.297  Sum_probs=41.9

Q ss_pred             EEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhC
Q 019722           38 AIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDC   83 (336)
Q Consensus        38 ~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~   83 (336)
                      +.|+||+|++|.++|+.|+++|++|++.+|++++++++.+++....
T Consensus         3 i~vigGaG~iG~alA~~la~~G~~V~l~~R~~e~~~~l~~~i~~~~   48 (212)
T d1jaya_           3 VALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIA   48 (212)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHHHH
T ss_pred             EEEEeCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC
Confidence            5677888999999999999999999999999999999999887654

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=98.13  E-value=7.4e-06  Score=66.07  Aligned_cols=84  Identities=20%  Similarity=0.224  Sum_probs=64.6

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHH---HHHHhhCCCCceEEEeccCCCHHHHHHHHH
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGA-RLVLPARSLKAAEEAK---ARLASDCPGSDIVVLPLDLSSLSSVRNFVS  106 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~---~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~  106 (336)
                      .+++||+|+|.|+ ||.|++++..|++.|. +++++.|+.+..++..   +++...   ........|+.+.+.+.....
T Consensus        14 ~~l~~k~vlIlGa-GGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~---~~~~~~~~~~~~~~~~~~~~~   89 (182)
T d1vi2a1          14 FDIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNEN---TDCVVTVTDLADQQAFAEALA   89 (182)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHH---SSCEEEEEETTCHHHHHHHHH
T ss_pred             CCcCCCEEEEECC-cHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhh---cCcceEeeecccccchhhhhc
Confidence            4789999999996 7999999999999998 8999999876655443   344333   345566778888887766554


Q ss_pred             HHHhcCCCccEEEEcccCC
Q 019722          107 QFHSLNLPLNLLINNAGKF  125 (336)
Q Consensus       107 ~~~~~~~~id~lv~nAg~~  125 (336)
                             ..|++||+....
T Consensus        90 -------~~diiIN~Tp~G  101 (182)
T d1vi2a1          90 -------SADILTNGTKVG  101 (182)
T ss_dssp             -------TCSEEEECSSTT
T ss_pred             -------ccceeccccCCc
Confidence                   679999998653

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.00  E-value=1.6e-05  Score=63.39  Aligned_cols=79  Identities=11%  Similarity=0.261  Sum_probs=56.6

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCC
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNL  113 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  113 (336)
                      .|.++||+||+|++|...++.+...|++|+.+.+++++.+.+ +++     +..- +  .|.++.+..+.+.+....  .
T Consensus        28 ~g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~~~~~-~~~-----Ga~~-v--i~~~~~~~~~~i~~~t~~--~   96 (174)
T d1yb5a2          28 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIV-LQN-----GAHE-V--FNHREVNYIDKIKKYVGE--K   96 (174)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHT-----TCSE-E--EETTSTTHHHHHHHHHCT--T
T ss_pred             CCCEEEEEeccccccccccccccccCcccccccccccccccc-ccc-----Cccc-c--cccccccHHHHhhhhhcc--C
Confidence            578999999999999999999999999999999987765433 222     3322 2  366665555554444322  3


Q ss_pred             CccEEEEccc
Q 019722          114 PLNLLINNAG  123 (336)
Q Consensus       114 ~id~lv~nAg  123 (336)
                      ++|+++.+.|
T Consensus        97 g~d~v~d~~g  106 (174)
T d1yb5a2          97 GIDIIIEMLA  106 (174)
T ss_dssp             CEEEEEESCH
T ss_pred             CceEEeeccc
Confidence            6999998876

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=97.96  E-value=2.3e-05  Score=63.01  Aligned_cols=79  Identities=16%  Similarity=0.248  Sum_probs=56.3

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCC
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNL  113 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  113 (336)
                      .|.++||+||+|++|.+.++-....|++|+.+.+++++.+.+.+    .  +....+   |-.+++..+.+.+...  ..
T Consensus        29 ~G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~----~--Ga~~vi---~~~~~~~~~~~~~~~~--~~   97 (182)
T d1v3va2          29 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQ----I--GFDAAF---NYKTVNSLEEALKKAS--PD   97 (182)
T ss_dssp             SSCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----T--TCSEEE---ETTSCSCHHHHHHHHC--TT
T ss_pred             CCCEEEEEeCCCchhHHHHHHHHccCCEEEEeCCCHHHHHHHHh----h--hhhhhc---ccccccHHHHHHHHhh--cC
Confidence            58999999999999999999999999999999999876544332    1  333333   3333333344333322  24


Q ss_pred             CccEEEEccc
Q 019722          114 PLNLLINNAG  123 (336)
Q Consensus       114 ~id~lv~nAg  123 (336)
                      ++|+++.+.|
T Consensus        98 Gvd~v~D~vG  107 (182)
T d1v3va2          98 GYDCYFDNVG  107 (182)
T ss_dssp             CEEEEEESSC
T ss_pred             CCceeEEecC
Confidence            7999999887

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=97.92  E-value=3.2e-05  Score=61.35  Aligned_cols=75  Identities=19%  Similarity=0.315  Sum_probs=56.1

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCC
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNL  113 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  113 (336)
                      +.|.++|.|| |.+|+.+|+.|+++|++|++++|+.++++++.+++      ........+..........+.       
T Consensus         1 ~~K~IliiGa-G~~G~~~a~~L~~~g~~V~v~dr~~~~a~~l~~~~------~~~~~~~~~~~~~~~~~~~i~-------   66 (182)
T d1e5qa1           1 ATKSVLMLGS-GFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGV------QHSTPISLDVNDDAALDAEVA-------   66 (182)
T ss_dssp             CCCEEEEECC-STTHHHHHHHHHTTTCEEEEEESCHHHHHHHHTTC------TTEEEEECCTTCHHHHHHHHT-------
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECChHHHHHHHhcc------cccccccccccchhhhHhhhh-------
Confidence            4689999986 99999999999999999999999999888766532      344555556666666655543       


Q ss_pred             CccEEEEcc
Q 019722          114 PLNLLINNA  122 (336)
Q Consensus       114 ~id~lv~nA  122 (336)
                      ..|.++...
T Consensus        67 ~~~~~i~~~   75 (182)
T d1e5qa1          67 KHDLVISLI   75 (182)
T ss_dssp             TSSEEEECS
T ss_pred             ccceeEeec
Confidence            456666544

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=97.84  E-value=3.6e-05  Score=61.46  Aligned_cols=80  Identities=15%  Similarity=0.221  Sum_probs=58.5

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCC
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNL  113 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  113 (336)
                      .|++++|+||+|++|...++-....|++|+.+++++++.+.+. ++     +.. ++  .|.++++-.+++.+...  -.
T Consensus        28 ~g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~~~~~-~l-----Ga~-~v--i~~~~~d~~~~v~~~t~--g~   96 (179)
T d1qora2          28 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSAL-KA-----GAW-QV--INYREEDLVERLKEITG--GK   96 (179)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH-HH-----TCS-EE--EETTTSCHHHHHHHHTT--TC
T ss_pred             CCCEEEEEccccccchHHHHHHHHhCCeEeecccchHHHHHHH-hc-----CCe-EE--EECCCCCHHHHHHHHhC--CC
Confidence            4789999999999999999999999999999999988875543 33     333 22  36666555555433221  23


Q ss_pred             CccEEEEcccC
Q 019722          114 PLNLLINNAGK  124 (336)
Q Consensus       114 ~id~lv~nAg~  124 (336)
                      .+|+++.+.|.
T Consensus        97 g~d~v~d~~g~  107 (179)
T d1qora2          97 KVRVVYDSVGR  107 (179)
T ss_dssp             CEEEEEECSCG
T ss_pred             CeEEEEeCccH
Confidence            68999988873

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=97.81  E-value=7.2e-05  Score=58.63  Aligned_cols=75  Identities=19%  Similarity=0.368  Sum_probs=58.1

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGA-RLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      .+++++.++|.|+ |++|..+++.|..+|+ +|.++.|+.++++++.+++     +.  .+.     ..+++...+.   
T Consensus        20 ~~l~~~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~-----~~--~~~-----~~~~~~~~l~---   83 (159)
T d1gpja2          20 GSLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDL-----GG--EAV-----RFDELVDHLA---   83 (159)
T ss_dssp             SCCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHH-----TC--EEC-----CGGGHHHHHH---
T ss_pred             CCcccCeEEEECC-CHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhh-----hc--ccc-----cchhHHHHhc---
Confidence            3689999999997 9999999999999998 7999999999988887765     22  222     2234444333   


Q ss_pred             hcCCCccEEEEcccCC
Q 019722          110 SLNLPLNLLINNAGKF  125 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~  125 (336)
                          ..|++|++.+..
T Consensus        84 ----~~Divi~atss~   95 (159)
T d1gpja2          84 ----RSDVVVSATAAP   95 (159)
T ss_dssp             ----TCSEEEECCSSS
T ss_pred             ----cCCEEEEecCCC
Confidence                579999998853

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.81  E-value=3.2e-05  Score=61.98  Aligned_cols=79  Identities=20%  Similarity=0.244  Sum_probs=55.2

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCC
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNL  113 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  113 (336)
                      .|.++||+||+|++|...++.+...|++|+++.+++++.+. +   ++.  +.. ++  .|-.+++-.+.+.+...  ..
T Consensus        25 ~g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~~~~~~-l---~~~--Ga~-~v--i~~~~~~~~~~v~~~t~--~~   93 (183)
T d1pqwa_          25 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREM-L---SRL--GVE-YV--GDSRSVDFADEILELTD--GY   93 (183)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHH-H---HTT--CCS-EE--EETTCSTHHHHHHHHTT--TC
T ss_pred             CCCEEEEECCCCCcccccchhhccccccceeeecccccccc-c---ccc--ccc-cc--ccCCccCHHHHHHHHhC--CC
Confidence            47899999999999999999999999999999998776543 2   222  333 22  24455444444333221  23


Q ss_pred             CccEEEEccc
Q 019722          114 PLNLLINNAG  123 (336)
Q Consensus       114 ~id~lv~nAg  123 (336)
                      ++|+++.+.|
T Consensus        94 g~d~v~d~~g  103 (183)
T d1pqwa_          94 GVDVVLNSLA  103 (183)
T ss_dssp             CEEEEEECCC
T ss_pred             CEEEEEeccc
Confidence            6999999887

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=97.72  E-value=0.00011  Score=58.12  Aligned_cols=78  Identities=19%  Similarity=0.243  Sum_probs=59.1

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      ..+++||.++|.| +||.+++++..|.+.|.+|.++.|+.++++++.+.+...   ..+..+..|  +.           
T Consensus        13 ~~~~~~k~vlIlG-aGGaarai~~al~~~g~~i~I~nRt~~ka~~l~~~~~~~---~~~~~~~~~--~~-----------   75 (170)
T d1nyta1          13 SFIRPGLRILLIG-AGGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHT---GSIQALSMD--EL-----------   75 (170)
T ss_dssp             TCCCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGG---SSEEECCSG--GG-----------
T ss_pred             CCCCCCCEEEEEC-CcHHHHHHHHHhcccceEEEeccchHHHHHHHHHHHhhc---ccccccccc--cc-----------
Confidence            3578899999999 589999999999999999999999999999888776553   233333322  11           


Q ss_pred             hcCCCccEEEEcccCC
Q 019722          110 SLNLPLNLLINNAGKF  125 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~  125 (336)
                       .....|++||+..+.
T Consensus        76 -~~~~~dliIN~Tp~G   90 (170)
T d1nyta1          76 -EGHEFDLIINATSSG   90 (170)
T ss_dssp             -TTCCCSEEEECCSCG
T ss_pred             -cccccceeecccccC
Confidence             123689999997643

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=97.66  E-value=5.6e-05  Score=61.00  Aligned_cols=86  Identities=17%  Similarity=0.156  Sum_probs=55.9

Q ss_pred             CCEEEE-eCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH-hcC
Q 019722           35 SVTAII-TGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH-SLN  112 (336)
Q Consensus        35 gk~~lI-tGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~-~~~  112 (336)
                      |.+++| +||+|++|.+.++-.-..|++|+.+.|+.+..++..+.+++.  +....+. .|-.+.......++++. ...
T Consensus        29 g~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~~~~~~~~~l--Gad~vi~-~~~~~~~~~~~~v~~~~~~~g  105 (189)
T d1gu7a2          29 GKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKEL--GATQVIT-EDQNNSREFGPTIKEWIKQSG  105 (189)
T ss_dssp             TTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHH--TCSEEEE-HHHHHCGGGHHHHHHHHHHHT
T ss_pred             CCEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEecccccchHHhhhhhc--cccEEEe-ccccchhHHHHHHHHHHhhcc
Confidence            555555 799999999999998899999999998877776666666554  3333222 22111222333333333 334


Q ss_pred             CCccEEEEccc
Q 019722          113 LPLNLLINNAG  123 (336)
Q Consensus       113 ~~id~lv~nAg  123 (336)
                      +++|+++.+.|
T Consensus       106 ~~vdvv~D~vg  116 (189)
T d1gu7a2         106 GEAKLALNCVG  116 (189)
T ss_dssp             CCEEEEEESSC
T ss_pred             CCceEEEECCC
Confidence            57999998876

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=97.60  E-value=0.00015  Score=57.95  Aligned_cols=82  Identities=20%  Similarity=0.295  Sum_probs=54.4

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcC
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGA-RLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLN  112 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  112 (336)
                      .|.+++|+|+ |+||...++.+...|+ +|+++++++++.+.+ +++     +... ++...-.+..+..+.+.++.. -
T Consensus        28 ~G~~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a-~~l-----Ga~~-vi~~~~~~~~~~~~~i~~~~~-~   98 (182)
T d1vj0a2          28 AGKTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSPNRLKLA-EEI-----GADL-TLNRRETSVEERRKAIMDITH-G   98 (182)
T ss_dssp             BTCEEEEECC-SHHHHHHHHHHHHTTBSEEEEEESCHHHHHHH-HHT-----TCSE-EEETTTSCHHHHHHHHHHHTT-T
T ss_pred             CCCEEEEECC-Cccchhheeccccccccccccccccccccccc-ccc-----cceE-EEeccccchHHHHHHHHHhhC-C
Confidence            5899999986 8999999999999998 899999999887543 333     3322 332222233333332222221 1


Q ss_pred             CCccEEEEcccC
Q 019722          113 LPLNLLINNAGK  124 (336)
Q Consensus       113 ~~id~lv~nAg~  124 (336)
                      .++|++|.+.|.
T Consensus        99 ~g~Dvvid~vG~  110 (182)
T d1vj0a2          99 RGADFILEATGD  110 (182)
T ss_dssp             SCEEEEEECSSC
T ss_pred             CCceEEeecCCc
Confidence            259999999885

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=97.58  E-value=0.00024  Score=56.27  Aligned_cols=77  Identities=18%  Similarity=0.195  Sum_probs=60.5

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHh
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHS  110 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  110 (336)
                      .+++||.++|.| +||.+++++..|.+.+.+|+++.|+.++++...+.+...   ..+..+..|..              
T Consensus        14 ~~~~~k~vlIlG-aGGaarai~~aL~~~~~~i~I~nR~~~~a~~l~~~~~~~---~~~~~~~~~~~--------------   75 (171)
T d1p77a1          14 WLRPNQHVLILG-AGGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPY---GNIQAVSMDSI--------------   75 (171)
T ss_dssp             CCCTTCEEEEEC-CSHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGG---SCEEEEEGGGC--------------
T ss_pred             CCCCCCEEEEEC-CcHHHHHHHHHHcccCceeeeccchHHHHHHHHHHHhhc---cccchhhhccc--------------
Confidence            467899999998 588899999999998889999999999999988887653   35555554421              


Q ss_pred             cCCCccEEEEcccCC
Q 019722          111 LNLPLNLLINNAGKF  125 (336)
Q Consensus       111 ~~~~id~lv~nAg~~  125 (336)
                      .....|++||+....
T Consensus        76 ~~~~~diiIN~tp~g   90 (171)
T d1p77a1          76 PLQTYDLVINATSAG   90 (171)
T ss_dssp             CCSCCSEEEECCCC-
T ss_pred             cccccceeeeccccc
Confidence            134689999998754

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=97.55  E-value=0.0003  Score=55.33  Aligned_cols=82  Identities=24%  Similarity=0.288  Sum_probs=56.1

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcC-
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLN-  112 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~-  112 (336)
                      .|.+++|+| +|++|...++.+...|++|+++++++++.+.+.+ +     +....+ ..|-. .+......+++.+.. 
T Consensus        26 ~g~~vlV~G-~G~vG~~~~~~ak~~Ga~vi~v~~~~~r~~~a~~-~-----ga~~~~-~~~~~-~~~~~~~~~~~~~~~g   96 (170)
T d1e3ja2          26 LGTTVLVIG-AGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKN-C-----GADVTL-VVDPA-KEEESSIIERIRSAIG   96 (170)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-T-----TCSEEE-ECCTT-TSCHHHHHHHHHHHSS
T ss_pred             CCCEEEEEc-ccccchhhHhhHhhhcccccccchHHHHHHHHHH-c-----CCcEEE-ecccc-ccccchhhhhhhcccc
Confidence            467899997 6899999999999999999999999988754433 2     333322 22222 223344444554444 


Q ss_pred             CCccEEEEcccC
Q 019722          113 LPLNLLINNAGK  124 (336)
Q Consensus       113 ~~id~lv~nAg~  124 (336)
                      ..+|++|.++|.
T Consensus        97 ~g~D~vid~~g~  108 (170)
T d1e3ja2          97 DLPNVTIDCSGN  108 (170)
T ss_dssp             SCCSEEEECSCC
T ss_pred             cCCceeeecCCC
Confidence            369999999984

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.52  E-value=0.00017  Score=54.47  Aligned_cols=71  Identities=21%  Similarity=0.278  Sum_probs=56.9

Q ss_pred             EEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCCCcc
Q 019722           37 TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLPLN  116 (336)
Q Consensus        37 ~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id  116 (336)
                      .++|.|+ |.+|+.+++.|.++|+.|++++++++..++..++       ....++..|.++++.++++-      ....|
T Consensus         2 ~IvI~G~-G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~~-------~~~~vi~Gd~~~~~~l~~~~------i~~a~   67 (132)
T d1lssa_           2 YIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAE-------IDALVINGDCTKIKTLEDAG------IEDAD   67 (132)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH-------CSSEEEESCTTSHHHHHHTT------TTTCS
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCCcceecCChhhhhhhhhh-------hhhhhccCcccchhhhhhcC------hhhhh
Confidence            4788886 9999999999999999999999999887765442       25678899999999877652      23567


Q ss_pred             EEEEc
Q 019722          117 LLINN  121 (336)
Q Consensus       117 ~lv~n  121 (336)
                      .++..
T Consensus        68 ~vv~~   72 (132)
T d1lssa_          68 MYIAV   72 (132)
T ss_dssp             EEEEC
T ss_pred             hhccc
Confidence            77764

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.49  E-value=8.1e-05  Score=50.60  Aligned_cols=42  Identities=24%  Similarity=0.353  Sum_probs=37.4

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHH
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEA   75 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~   75 (336)
                      .+.++||+||+||+|...++.+...|++|+.+.+++++.+.+
T Consensus        31 ~~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k~~~~   72 (77)
T d1o8ca2          31 QDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYL   72 (77)
T ss_dssp             GGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHH
T ss_pred             CCCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCHHHHHHH
Confidence            578999999999999999999899999999999998776543

>d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB)
species: Escherichia coli [TaxId: 562]

Probab=97.45  E-value=0.00021  Score=59.04  Aligned_cols=81  Identities=17%  Similarity=0.176  Sum_probs=57.6

Q ss_pred             CCCCCCEEEEeCC----------------CChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEecc
Q 019722           31 PNLSSVTAIITGA----------------TSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLD   94 (336)
Q Consensus        31 ~~l~gk~~lItGg----------------s~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D   94 (336)
                      .||+|+.+|||+|                ||-.|.+||+++..+|++|.++.-....           .+...+..+.  
T Consensus         2 ~dl~g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~Ga~V~li~g~~~~-----------~~p~~~~~~~--   68 (223)
T d1u7za_           2 NDLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSL-----------PTPPFVKRVD--   68 (223)
T ss_dssp             CTTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCC-----------CCCTTEEEEE--
T ss_pred             cccCCCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcCCchhhhhccccc-----------Ccccccccce--
Confidence            5899999999998                6789999999999999999987654321           1133555554  


Q ss_pred             CCCHHHHHHHHHHHHhcCCCccEEEEcccCCCC
Q 019722           95 LSSLSSVRNFVSQFHSLNLPLNLLINNAGKFAH  127 (336)
Q Consensus        95 l~~~~~v~~~~~~~~~~~~~id~lv~nAg~~~~  127 (336)
                      +....+....+.+..   ...|++|++|++...
T Consensus        69 ~~t~~~m~~~~~~~~---~~~D~~i~aAAvsDf   98 (223)
T d1u7za_          69 VMTALEMEAAVNASV---QQQNIFIGCAAVADY   98 (223)
T ss_dssp             CCSHHHHHHHHHHHG---GGCSEEEECCBCCSE
T ss_pred             ehhhHHHHHHHHhhh---ccceeEeeeechhhh
Confidence            444555554444333   357999999997543

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.43  E-value=0.0059  Score=46.60  Aligned_cols=120  Identities=14%  Similarity=0.165  Sum_probs=76.9

Q ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCC--EEEEeeCChHHHHHHHHHHHhhC--CCCceEEEeccCCCHHHHHHHHHH
Q 019722           32 NLSSVTAIITGATSGIGAETARVLAKRGA--RLVLPARSLKAAEEAKARLASDC--PGSDIVVLPLDLSSLSSVRNFVSQ  107 (336)
Q Consensus        32 ~l~gk~~lItGgs~gIG~aia~~L~~~G~--~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~~Dl~~~~~v~~~~~~  107 (336)
                      +-.++.+.|+|+ |.+|.+++..|+.+|.  +|++++++++.++-....+....  ....+.+...|..           
T Consensus         3 ~~~~~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~~~~~d~~-----------   70 (148)
T d1ldna1           3 NNGGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDYD-----------   70 (148)
T ss_dssp             TTTSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCGG-----------
T ss_pred             CCCCCeEEEECc-CHHHHHHHHHHHhcCCCceEEEEeeccccccchhccHhhCccccCCCeEEEECCHH-----------
Confidence            345677888896 9999999999999985  79999999988766555565431  1233444443331           


Q ss_pred             HHhcCCCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCc
Q 019722          108 FHSLNLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSI  178 (336)
Q Consensus       108 ~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~  178 (336)
                         ....-|++|.++|....+.. +.   .+.+..|    ..+++.+.+.+.+..    +.+.++++|.+.
T Consensus        71 ---~l~daDvvvitag~~~~~~~-~R---~dl~~~N----~~i~~~i~~~i~~~~----p~a~~ivvtNPv  126 (148)
T d1ldna1          71 ---DCRDADLVVICAGANQKPGE-TR---LDLVDKN----IAIFRSIVESVMASG----FQGLFLVATNPV  126 (148)
T ss_dssp             ---GTTTCSEEEECCSCCCCTTT-CS---GGGHHHH----HHHHHHHHHHHHHHT----CCSEEEECSSSH
T ss_pred             ---HhccceeEEEecccccccCc-ch---hHHHHHH----HHHHHHHHHHHHhhC----CCceEEEecCcc
Confidence               12357999999997544321 21   2333334    345666667766653    257777777753

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=97.42  E-value=0.00038  Score=54.76  Aligned_cols=80  Identities=19%  Similarity=0.269  Sum_probs=56.4

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcC
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGA-RLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLN  112 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  112 (336)
                      .|.+++|.|++|++|..++..+...|. +|+++++++++.+.+. ++     +.. +++  |.++.+..+.+.+...  -
T Consensus        27 ~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~~-~~-----Ga~-~~i--~~~~~~~~~~~~~~~~--~   95 (170)
T d1jvba2          27 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAK-RA-----GAD-YVI--NASMQDPLAEIRRITE--S   95 (170)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHH-HH-----TCS-EEE--ETTTSCHHHHHHHHTT--T
T ss_pred             CCCEEEEEeccccceeeeeecccccccccccccccchhhHHHHH-Hc-----CCc-eee--ccCCcCHHHHHHHHhh--c
Confidence            478999999999999999999999996 8999999988765443 22     333 223  3444444444443322  2


Q ss_pred             CCccEEEEcccC
Q 019722          113 LPLNLLINNAGK  124 (336)
Q Consensus       113 ~~id~lv~nAg~  124 (336)
                      +.+|++|.++|.
T Consensus        96 ~~~d~vid~~g~  107 (170)
T d1jvba2          96 KGVDAVIDLNNS  107 (170)
T ss_dssp             SCEEEEEESCCC
T ss_pred             ccchhhhccccc
Confidence            369999999884

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.42  E-value=7.6e-05  Score=59.52  Aligned_cols=79  Identities=19%  Similarity=0.264  Sum_probs=52.5

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcC
Q 019722           33 LSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLN  112 (336)
Q Consensus        33 l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  112 (336)
                      -.|.++||+||+||+|...++-....|++|+.+.+++++.+.+. ++     +....+   |-.+  ...+..+.+  .-
T Consensus        30 ~~g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~~~~~-~l-----Ga~~vi---~~~~--~~~~~~~~~--~~   96 (176)
T d1xa0a2          30 PERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLR-VL-----GAKEVL---ARED--VMAERIRPL--DK   96 (176)
T ss_dssp             GGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHH-HT-----TCSEEE---ECC-----------C--CS
T ss_pred             CCCCEEEEEeccchHHHHHHHHHHHcCCceEEecCchHHHHHHH-hc-----ccceee---ecch--hHHHHHHHh--hc
Confidence            45889999999999999999999999999999999988765443 22     333322   2221  112222211  22


Q ss_pred             CCccEEEEcccC
Q 019722          113 LPLNLLINNAGK  124 (336)
Q Consensus       113 ~~id~lv~nAg~  124 (336)
                      +++|++|.+.|-
T Consensus        97 ~gvD~vid~vgg  108 (176)
T d1xa0a2          97 QRWAAAVDPVGG  108 (176)
T ss_dssp             CCEEEEEECSTT
T ss_pred             cCcCEEEEcCCc
Confidence            479999999883

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.39  E-value=0.0013  Score=51.65  Aligned_cols=81  Identities=23%  Similarity=0.271  Sum_probs=56.6

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcC
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGA-RLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLN  112 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  112 (336)
                      .|.+++|.|+ |++|...+..+...|+ +|+++++++++++.+ +++     +.. +++..+-.+.....+.++...  -
T Consensus        26 ~gd~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a-~~~-----Ga~-~~~~~~~~~~~~~~~~~~~~~--g   95 (171)
T d1pl8a2          26 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKA-KEI-----GAD-LVLQISKESPQEIARKVEGQL--G   95 (171)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHH-HHT-----TCS-EEEECSSCCHHHHHHHHHHHH--T
T ss_pred             CCCEEEEECC-CccHHHHHHHHHHcCCceEEeccCCHHHHHHH-HHh-----CCc-ccccccccccccccccccccC--C
Confidence            4678999986 9999999999999999 899999998887643 332     333 233334444555544444332  2


Q ss_pred             CCccEEEEcccC
Q 019722          113 LPLNLLINNAGK  124 (336)
Q Consensus       113 ~~id~lv~nAg~  124 (336)
                      .++|++|.+.|.
T Consensus        96 ~g~Dvvid~~G~  107 (171)
T d1pl8a2          96 CKPEVTIECTGA  107 (171)
T ss_dssp             SCCSEEEECSCC
T ss_pred             CCceEEEeccCC
Confidence            379999999984

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.36  E-value=0.00034  Score=55.23  Aligned_cols=74  Identities=15%  Similarity=0.224  Sum_probs=51.7

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCC
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNL  113 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  113 (336)
                      .|++++|+||+|++|...++.+...|++|+.+.+++++.+... ++     +....+   |..+  .+    +++.. ..
T Consensus        27 ~g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~~~~~-~l-----Ga~~~i---~~~~--~~----~~~~~-~~   90 (171)
T d1iz0a2          27 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPL-AL-----GAEEAA---TYAE--VP----ERAKA-WG   90 (171)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHH-HT-----TCSEEE---EGGG--HH----HHHHH-TT
T ss_pred             CCCEEEEEeccccchhhhhhhhccccccccccccccccccccc-cc-----ccceee---ehhh--hh----hhhhc-cc
Confidence            6899999999999999999999999999999999887665433 22     333222   3221  11    22222 34


Q ss_pred             CccEEEEccc
Q 019722          114 PLNLLINNAG  123 (336)
Q Consensus       114 ~id~lv~nAg  123 (336)
                      ++|++|.+.|
T Consensus        91 g~D~v~d~~G  100 (171)
T d1iz0a2          91 GLDLVLEVRG  100 (171)
T ss_dssp             SEEEEEECSC
T ss_pred             cccccccccc
Confidence            7999998766

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=97.29  E-value=0.0018  Score=49.40  Aligned_cols=117  Identities=17%  Similarity=0.185  Sum_probs=70.2

Q ss_pred             EEEEeCCCChHHHHHHHHHHHCCC--EEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCCC
Q 019722           37 TAIITGATSGIGAETARVLAKRGA--RLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLP  114 (336)
Q Consensus        37 ~~lItGgs~gIG~aia~~L~~~G~--~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  114 (336)
                      .+.|+||+|.+|.+++..|+.+|.  ++++++.++.+.+.  ..+...  .. +.....-+ ...+....++       .
T Consensus         2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~a--~Dl~~~--~~-~~~~~~~~-~~~~~~~~~~-------~   68 (144)
T d1mlda1           2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVA--ADLSHI--ET-RATVKGYL-GPEQLPDCLK-------G   68 (144)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHH--HHHTTS--SS-SCEEEEEE-SGGGHHHHHT-------T
T ss_pred             eEEEECCCChHHHHHHHHHHhCCccceEEEEeccccchhh--HHHhhh--hh-hcCCCeEE-cCCChHHHhC-------C
Confidence            578999999999999999999985  79999987654332  233221  11 11111112 2233333332       5


Q ss_pred             ccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCc
Q 019722          115 LNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSI  178 (336)
Q Consensus       115 id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~  178 (336)
                      -|++|..||....+. .+.   .+.++.|..    .++...+.+.+..    +.+.++++|.+.
T Consensus        69 aDivVitag~~~~~g-~sR---~~ll~~N~~----i~~~i~~~i~~~~----p~~iiivvtNPv  120 (144)
T d1mlda1          69 CDVVVIPAGVPRKPG-MTR---DDLFNTNAT----IVATLTAACAQHC----PDAMICIISNPV  120 (144)
T ss_dssp             CSEEEECCSCCCCTT-CCG---GGGHHHHHH----HHHHHHHHHHHHC----TTSEEEECSSCH
T ss_pred             CCEEEECCCcCCCCC-CCc---chHHHHHHH----HHHHHHHHHHhcC----CCeEEEEecCch
Confidence            799999999743331 222   334555544    4455666665543    257888888764

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=97.28  E-value=0.0037  Score=47.68  Aligned_cols=116  Identities=12%  Similarity=0.159  Sum_probs=70.3

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHCC--CEEEEeeCChHHHHHHHHHHHhhC-CCCceEEEeccCCCHHHHHHHHHHHHhc
Q 019722           35 SVTAIITGATSGIGAETARVLAKRG--ARLVLPARSLKAAEEAKARLASDC-PGSDIVVLPLDLSSLSSVRNFVSQFHSL  111 (336)
Q Consensus        35 gk~~lItGgs~gIG~aia~~L~~~G--~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  111 (336)
                      ++.+.|.|+ |.+|..++..|+.+|  .+|+++++++++++-....+.... ..........|.   +           .
T Consensus         5 ~~KI~IIGa-G~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~a~~~~~~~~~~~~d~---~-----------~   69 (146)
T d1ez4a1           5 HQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEY---S-----------D   69 (146)
T ss_dssp             BCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECCG---G-----------G
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhccccccCCceEeeccH---H-----------H
Confidence            457777885 999999999999998  489999999987765555554321 122334444443   1           1


Q ss_pred             CCCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCC
Q 019722          112 NLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSS  177 (336)
Q Consensus       112 ~~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~  177 (336)
                      ...-|++|.+||....+.    ..-.+.+..|.    .+++...+.+.+..    +++.++++|.+
T Consensus        70 ~~~adivvitag~~~~~g----~~r~~l~~~N~----~i~~~~~~~i~~~~----p~aivivvtNP  123 (146)
T d1ez4a1          70 CKDADLVVITAGAPQKPG----ESRLDLVNKNL----NILSSIVKPVVDSG----FDGIFLVAANP  123 (146)
T ss_dssp             GTTCSEEEECCCC--------------CHHHHH----HHHHHHHHHHHHTT----CCSEEEECSSS
T ss_pred             hccccEEEEecccccCCC----CCHHHHHHHHH----HHHHHHHHHHhhcC----CCcEEEEeCCc
Confidence            235799999999654321    11223344443    46666777776653    25666666654

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.24  E-value=0.00029  Score=56.54  Aligned_cols=79  Identities=15%  Similarity=0.197  Sum_probs=52.5

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCE-EEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcC
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGAR-LVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLN  112 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~~-V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  112 (336)
                      .+.+|||+||+||+|...++-.-..|++ |+.+.+++++..++.+++     +.. .++  |..+++. .+.++++..  
T Consensus        30 ~~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~-----gad-~vi--~~~~~~~-~~~~~~~~~--   98 (187)
T d1vj1a2          30 SNQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSEL-----GFD-AAV--NYKTGNV-AEQLREACP--   98 (187)
T ss_dssp             SCCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHS-----CCS-EEE--ETTSSCH-HHHHHHHCT--
T ss_pred             CCCEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhcc-----cce-EEe--eccchhH-HHHHHHHhc--
Confidence            3589999999999999999998889985 555677766666555443     322 222  4444333 333333322  


Q ss_pred             CCccEEEEccc
Q 019722          113 LPLNLLINNAG  123 (336)
Q Consensus       113 ~~id~lv~nAg  123 (336)
                      .++|+++.+.|
T Consensus        99 ~GvDvv~D~vG  109 (187)
T d1vj1a2          99 GGVDVYFDNVG  109 (187)
T ss_dssp             TCEEEEEESSC
T ss_pred             cCceEEEecCC
Confidence            36999998887

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=97.17  E-value=0.0058  Score=46.53  Aligned_cols=120  Identities=13%  Similarity=0.142  Sum_probs=73.1

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHCCC--EEEEeeCChHHHHHHHHHHHhhC--CCCceEEEeccCCCHHHHHHHHHHHHhc
Q 019722           36 VTAIITGATSGIGAETARVLAKRGA--RLVLPARSLKAAEEAKARLASDC--PGSDIVVLPLDLSSLSSVRNFVSQFHSL  111 (336)
Q Consensus        36 k~~lItGgs~gIG~aia~~L~~~G~--~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  111 (336)
                      |.+.|+| +|.+|.+++..|+.+|.  +++++++++++++-....+....  .+........|.   +.           
T Consensus         2 kKI~IIG-aG~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl~~a~~~~~~~~~~~~~d~---~~-----------   66 (146)
T d1hyha1           2 RKIGIIG-LGNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVINDW---AA-----------   66 (146)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESCG---GG-----------
T ss_pred             CeEEEEC-cCHHHHHHHHHHHhcCCCceEEEEecccchhhhHHHhhhccccccCCccceeccCH---HH-----------
Confidence            5666778 59999999999999984  89999999988765555555431  123334333332   11           


Q ss_pred             CCCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCc
Q 019722          112 NLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSI  178 (336)
Q Consensus       112 ~~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~  178 (336)
                      ...-|++|.+||......+-...+=.+.+..|    ..+++.+.+.+.+..    +++-+|++|.+.
T Consensus        67 l~~adiVVitaG~~~~~~~~~g~~R~~l~~~N----~~i~~~i~~~i~~~~----p~aivivvtNPv  125 (146)
T d1hyha1          67 LADADVVISTLGNIKLQQDNPTGDRFAELKFT----SSMVQSVGTNLKESG----FHGVLVVISNPV  125 (146)
T ss_dssp             GTTCSEEEECCSCGGGTC-------CTTHHHH----HHHHHHHHHHHHHTT----CCSEEEECSSSH
T ss_pred             hccccEEEEeccccccccccCCccHHHHHHHH----HHHHHHHHHHHhhcC----CCeEEEEecCcH
Confidence            12579999999965432111111112233444    356677777777653    356777777753

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=97.15  E-value=0.00038  Score=52.39  Aligned_cols=73  Identities=8%  Similarity=0.079  Sum_probs=54.9

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCCCc
Q 019722           36 VTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLPL  115 (336)
Q Consensus        36 k~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i  115 (336)
                      |.++|.|+ |-+|.++++.|.++|..|++++.+++..+++.        .....++.+|.++++.+.++-      ....
T Consensus         1 k~~iIiG~-G~~G~~la~~L~~~g~~vvvid~d~~~~~~~~--------~~~~~~~~gd~~~~~~l~~a~------i~~a   65 (134)
T d2hmva1           1 KQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYA--------SYATHAVIANATEENELLSLG------IRNF   65 (134)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHHTT--------TTCSEEEECCTTCTTHHHHHT------GGGC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCeEEEecCcHHHHHHHH--------HhCCcceeeecccchhhhccC------Cccc
Confidence            55777765 89999999999999999999999998877643        223456778999988776641      1246


Q ss_pred             cEEEEccc
Q 019722          116 NLLINNAG  123 (336)
Q Consensus       116 d~lv~nAg  123 (336)
                      |.+|...+
T Consensus        66 ~~vi~~~~   73 (134)
T d2hmva1          66 EYVIVAIG   73 (134)
T ss_dssp             SEEEECCC
T ss_pred             cEEEEEcC
Confidence            77776554

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=97.13  E-value=0.0024  Score=49.22  Aligned_cols=124  Identities=14%  Similarity=0.084  Sum_probs=72.7

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhhC--CCCceEEEeccCCCHHHHHHHHHHHHh
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGA-RLVLPARSLKAAEEAKARLASDC--PGSDIVVLPLDLSSLSSVRNFVSQFHS  110 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~~Dl~~~~~v~~~~~~~~~  110 (336)
                      +.+.+.|.|+ |.+|..++..|+.++. ++++++.+++.++-....+....  .+........  ++.   +..++    
T Consensus         6 k~~KI~IIGa-G~VG~~lA~~l~~~~~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~--~~~---~~~~~----   75 (154)
T d1pzga1           6 RRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAE--YSY---EAALT----   75 (154)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEE--CSH---HHHHT----
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHhCCCceEEEEEeccccchhHHHHHhhhccccCCeeEEecc--Cch---hhhhc----
Confidence            4566777786 9999999999998885 89999988877665555544321  1112222211  111   11111    


Q ss_pred             cCCCccEEEEcccCCCCCCCCCch-hhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCc
Q 019722          111 LNLPLNLLINNAGKFAHQHAISED-GIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSI  178 (336)
Q Consensus       111 ~~~~id~lv~nAg~~~~~~~~~~~-~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~  178 (336)
                         .-|++|..||....+.+.+.+ .-.+.+..|.    .+++...+.+.+..    +++.++++|.+.
T Consensus        76 ---~adiVvitag~~~~~g~~~~~~tR~~l~~~n~----~iv~~i~~~i~~~~----p~aiviivsNPv  133 (154)
T d1pzga1          76 ---GADCVIVTAGLTKVPGKPDSEWSRNDLLPFNS----KIIREIGQNIKKYC----PKTFIIVVTNPL  133 (154)
T ss_dssp             ---TCSEEEECCSCSSCTTCCGGGCCGGGGHHHHH----HHHHHHHHHHHHHC----TTCEEEECCSSH
T ss_pred             ---CCCeEEEecccccCCCCCCcccchhhhhhhhH----HHHHHHHHHHHhcC----CCcEEEEeCCcH
Confidence               579999999976554322211 2223344443    45566666666543    256777777754

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=97.10  E-value=0.02  Score=44.07  Aligned_cols=122  Identities=14%  Similarity=0.147  Sum_probs=78.8

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCC--EEEEeeCChHHHHHHHHHHHhhC--CCCceEEEeccCCCHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGA--RLVLPARSLKAAEEAKARLASDC--PGSDIVVLPLDLSSLSSVRNFV  105 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~--~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~~Dl~~~~~v~~~~  105 (336)
                      ...+.++.+.|.|+ |.+|.+++..|+.+|.  ++++++++++.++-....+....  .+........|..+        
T Consensus        15 ~~~~~~~KV~IIGa-G~VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alDl~h~~~~~~~~~~~~~~d~~~--------   85 (160)
T d1i0za1          15 EATVPNNKITVVGV-GQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQHGSLFLQTPKIVADKDYSV--------   85 (160)
T ss_dssp             CCCCCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCCCSEEEECSSGGG--------
T ss_pred             cccCCCCeEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHHHhccccccCCCeEEeccchhh--------
Confidence            34456678888885 9999999999999996  89999999888765555554421  12223323233321        


Q ss_pred             HHHHhcCCCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCc
Q 019722          106 SQFHSLNLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSI  178 (336)
Q Consensus       106 ~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~  178 (336)
                            ...-|++|..||....+ ..+.   .+.+..|    ..+++...+.+.+...    ++-+|++|.+.
T Consensus        86 ------~~~adiVVitAg~~~~~-g~tR---~~l~~~N----~~i~~~i~~~i~~~~p----~aiiivvtNPv  140 (160)
T d1i0za1          86 ------TANSKIVVVTAGVRQQE-GESR---LNLVQRN----VNVFKFIIPQIVKYSP----DCIIIVVSNPV  140 (160)
T ss_dssp             ------GTTCSEEEECCSCCCCT-TCCG---GGGHHHH----HHHHHHHHHHHHHHCT----TCEEEECSSSH
T ss_pred             ------cccccEEEEecCCcccc-Ccch---HHHHHHH----HHHHHHHHHHHHhcCC----CcEEEEeCCch
Confidence                  22579999999975433 1222   2334444    3477778888877542    57777777754

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=97.08  E-value=0.00084  Score=53.08  Aligned_cols=79  Identities=15%  Similarity=0.170  Sum_probs=53.6

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcC
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGA-RLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLN  112 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  112 (336)
                      .|.+++|.|+ |++|...++.+...|+ +|+++++++++.+.+ +++     +.. +++  |..+.+..+.+.+...  -
T Consensus        27 ~g~~VlI~Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a-~~l-----Ga~-~~i--~~~~~~~~~~v~~~t~--g   94 (174)
T d1jqba2          27 MGSSVVVIGI-GAVGLMGIAGAKLRGAGRIIGVGSRPICVEAA-KFY-----GAT-DIL--NYKNGHIEDQVMKLTN--G   94 (174)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHTTTCSCEEEECCCHHHHHHH-HHH-----TCS-EEE--CGGGSCHHHHHHHHTT--T
T ss_pred             CCCEEEEEcC-CcchhhhhhhhhcccccccccccchhhhHHHH-Hhh-----Ccc-ccc--cccchhHHHHHHHHhh--c
Confidence            4778999975 8999999999999998 799999998876544 333     322 233  3433333333333221  1


Q ss_pred             CCccEEEEcccC
Q 019722          113 LPLNLLINNAGK  124 (336)
Q Consensus       113 ~~id~lv~nAg~  124 (336)
                      .++|++|.++|.
T Consensus        95 ~G~D~vid~~g~  106 (174)
T d1jqba2          95 KGVDRVIMAGGG  106 (174)
T ss_dssp             SCEEEEEECSSC
T ss_pred             cCcceEEEccCC
Confidence            359999999984

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=97.04  E-value=0.0016  Score=49.96  Aligned_cols=85  Identities=18%  Similarity=0.192  Sum_probs=58.4

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      .++..-|++.|.||.|.+|..+++.|.++|++|.+.+|+.....+...+      +..+.+...+   ...+...+.++.
T Consensus         4 ~~~~~~~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~~~~~~~~~~------~~~~v~~~~~---~~~~~~v~~~~~   74 (152)
T d2pv7a2           4 TINSDIHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWAVAESILA------NADVVIVSVP---INLTLETIERLK   74 (152)
T ss_dssp             CSCTTCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGGGHHHHHT------TCSEEEECSC---GGGHHHHHHHHG
T ss_pred             ccCCCCCeEEEEcCCCHHHHHHHHHHHHcCCCcEecccccccccchhhh------hccccccccc---hhhheeeeeccc
Confidence            3556668999999999999999999999999999999987654433221      3455555444   456666676766


Q ss_pred             hcCCCccEEEEccc
Q 019722          110 SLNLPLNLLINNAG  123 (336)
Q Consensus       110 ~~~~~id~lv~nAg  123 (336)
                      ....+=.+++..+.
T Consensus        75 ~~~~~~~iiiD~~S   88 (152)
T d2pv7a2          75 PYLTENMLLADLTS   88 (152)
T ss_dssp             GGCCTTSEEEECCS
T ss_pred             ccccCCceEEEecc
Confidence            55433334554443

>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.00  E-value=0.006  Score=47.15  Aligned_cols=122  Identities=16%  Similarity=0.202  Sum_probs=77.7

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCC--EEEEeeCChHHHHHHHHHHHhhCC--CCceEEEeccCCCHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGA--RLVLPARSLKAAEEAKARLASDCP--GSDIVVLPLDLSSLSSVRNFV  105 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~--~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~~Dl~~~~~v~~~~  105 (336)
                      ...++...+.|+|+ |.+|..++..|+.+|.  ++++++++++.++-....+.....  +........|..         
T Consensus        14 ~~~~~~~KI~IIGa-G~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~~~~~~~~~~~~~~~d~~---------   83 (159)
T d2ldxa1          14 EDKLSRCKITVVGV-GDVGMACAISILLKGLADELALVDADTDKLRGEALDLQHGSLFLSTPKIVFGKDYN---------   83 (159)
T ss_dssp             CCCCCCCEEEEECC-SHHHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHHHHHHTTTTCSCCEEEEESSGG---------
T ss_pred             cccCCCCeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCchhhhccHHHHhCcchhcCCCeEEeccchh---------
Confidence            34466667888885 9999999999999985  799999998887766666654221  222222223321         


Q ss_pred             HHHHhcCCCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCc
Q 019722          106 SQFHSLNLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSI  178 (336)
Q Consensus       106 ~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~  178 (336)
                           ....-|++|..||....+. .+..   +.++.|    ..+++...+.+.+..    +.+.++++|.+.
T Consensus        84 -----~~~~adivvitag~~~~~~-~~R~---dll~~N----~~i~~~i~~~i~~~~----p~~ivivvtNPv  139 (159)
T d2ldxa1          84 -----VSANSKLVIITAGARMVSG-QTRL---DLLQRN----VAIMKAIVPGVIQNS----PDCKIIVVTNPV  139 (159)
T ss_dssp             -----GGTTEEEEEECCSCCCCTT-TCSS---CTTHHH----HHHHHHHTTTHHHHS----TTCEEEECSSSH
T ss_pred             -----hhccccEEEEecccccCCC-CCHH---HHHHHH----HHHHHHHHHHHhccC----CCeEEEEeCCcH
Confidence                 1236799999999755442 2222   223333    345666777776653    257888887754

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=96.93  E-value=0.0042  Score=48.93  Aligned_cols=80  Identities=18%  Similarity=0.268  Sum_probs=54.6

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcC
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGA-RLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLN  112 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  112 (336)
                      .|.+++|.|+ ||+|...++.+...|+ +|+++++++++++... ++     +....+-.-|-.+  ..+.+.+...  .
T Consensus        29 ~g~tVlI~G~-GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~Ak-~~-----GA~~~in~~~~~~--~~~~~~~~~~--g   97 (176)
T d1d1ta2          29 PGSTCVVFGL-GGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAM-AV-----GATECISPKDSTK--PISEVLSEMT--G   97 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-HH-----TCSEEECGGGCSS--CHHHHHHHHH--T
T ss_pred             CCCEEEEECC-CchhHHHHHHHHHcCCceEEEecCcHHHHHHHH-hc-----CCcEEECccccch--HHHHHHHHhc--c
Confidence            5789999985 9999999999999996 8999999999877443 33     4433332223222  1222332222  2


Q ss_pred             CCccEEEEcccC
Q 019722          113 LPLNLLINNAGK  124 (336)
Q Consensus       113 ~~id~lv~nAg~  124 (336)
                      .++|++|.+.|.
T Consensus        98 ~G~d~vi~~~g~  109 (176)
T d1d1ta2          98 NNVGYTFEVIGH  109 (176)
T ss_dssp             SCCCEEEECSCC
T ss_pred             ccceEEEEeCCc
Confidence            379999999884

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=96.90  E-value=0.0043  Score=48.13  Aligned_cols=82  Identities=22%  Similarity=0.208  Sum_probs=55.0

Q ss_pred             EEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHH--------hhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           38 AIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLA--------SDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        38 ~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~--------~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      +.|.| .|-+|.++++.|.++|++|++.+|+++..++..+.-.        +...+..+.++.+   .+..+.++++++.
T Consensus         3 I~iIG-~G~mG~~lA~~l~~~g~~V~~~d~~~~~~~~a~~~~~~~~~~~~~~~~~~~DiIilav---p~~~~~~vl~~l~   78 (165)
T d2f1ka2           3 IGVVG-LGLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQLVDEAGQDLSLLQTAKIIFLCT---PIQLILPTLEKLI   78 (165)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTSCSEEESCGGGGTTCSEEEECS---CHHHHHHHHHHHG
T ss_pred             EEEEe-ecHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHhhccceeeeecccccccccccccC---cHhhhhhhhhhhh
Confidence            44554 6999999999999999999999999887765443210        1112344555533   3577888888887


Q ss_pred             hcCCCccEEEEccc
Q 019722          110 SLNLPLNLLINNAG  123 (336)
Q Consensus       110 ~~~~~id~lv~nAg  123 (336)
                      ....+=.+++..++
T Consensus        79 ~~l~~~~iv~~~~s   92 (165)
T d2f1ka2          79 PHLSPTAIVTDVAS   92 (165)
T ss_dssp             GGSCTTCEEEECCS
T ss_pred             hhcccccceeeccc
Confidence            66544445555543

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=96.87  E-value=0.00037  Score=56.53  Aligned_cols=46  Identities=24%  Similarity=0.445  Sum_probs=40.5

Q ss_pred             CCCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHH
Q 019722           29 GCPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEA   75 (336)
Q Consensus        29 ~~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~   75 (336)
                      |..+|+||+++|-| .|.+|.++++.|.+.|++|++.+.+.......
T Consensus        21 g~~~L~gk~v~IqG-~G~VG~~~A~~L~~~Gakvvv~d~d~~~~~~~   66 (201)
T d1c1da1          21 GLGSLDGLTVLVQG-LGAVGGSLASLAAEAGAQLLVADTDTERVAHA   66 (201)
T ss_dssp             TCCCSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred             CCCCCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEecchHHHHHHH
Confidence            45579999999998 88899999999999999999999998776543

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=96.87  E-value=0.0023  Score=50.28  Aligned_cols=80  Identities=19%  Similarity=0.282  Sum_probs=54.8

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcC
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGA-RLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLN  112 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  112 (336)
                      .|.+++|.|+ +|+|...+..+...|+ +|+++++++++.+...+ +     +....+...|.  .+.+....+...  .
T Consensus        28 ~GdtVlV~Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a~~-~-----Ga~~~i~~~~~--~~~~~~~~~~~~--~   96 (176)
T d2jhfa2          28 QGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKE-V-----GATECVNPQDY--KKPIQEVLTEMS--N   96 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH-T-----TCSEEECGGGC--SSCHHHHHHHHT--T
T ss_pred             CCCEEEEECC-CCcHHHHHHHHHHcCCceEEeecCcHHHHHHHHH-h-----CCeeEEecCCc--hhHHHHHHHHHh--c
Confidence            5789999998 7899999999999996 89999999988664432 2     32222222222  233444444443  2


Q ss_pred             CCccEEEEcccC
Q 019722          113 LPLNLLINNAGK  124 (336)
Q Consensus       113 ~~id~lv~nAg~  124 (336)
                      +++|++|.+.|.
T Consensus        97 ~G~D~vid~~G~  108 (176)
T d2jhfa2          97 GGVDFSFEVIGR  108 (176)
T ss_dssp             SCBSEEEECSCC
T ss_pred             CCCCEEEecCCc
Confidence            479999999885

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=96.84  E-value=0.009  Score=46.75  Aligned_cols=42  Identities=21%  Similarity=0.163  Sum_probs=36.6

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHH
Q 019722           35 SVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKA   77 (336)
Q Consensus        35 gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~   77 (336)
                      .|++.|.|+ |.+|.+++..|+++|++|.+++|+++..+...+
T Consensus         1 sk~iaIiGa-G~~G~~~A~~l~~~G~~V~~~~r~~~~~~~~~~   42 (184)
T d1bg6a2           1 SKTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQD   42 (184)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred             CCEEEEECc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH
Confidence            378888986 999999999999999999999999887766543

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.82  E-value=0.0039  Score=48.59  Aligned_cols=76  Identities=21%  Similarity=0.302  Sum_probs=51.5

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCC
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNL  113 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  113 (336)
                      .|.+++|.|+ |++|...++.+...|++|+++++++++.+.. +++     +....+..-+-.+      +.+   ...+
T Consensus        27 ~g~~vlI~Ga-G~vG~~a~q~ak~~G~~vi~~~~~~~k~~~a-~~l-----Ga~~~i~~~~~~~------~~~---~~~~   90 (168)
T d1piwa2          27 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDA-MKM-----GADHYIATLEEGD------WGE---KYFD   90 (168)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHH-HHH-----TCSEEEEGGGTSC------HHH---HSCS
T ss_pred             CCCEEEEECC-CCcchhHHHHhhhccccccccccchhHHHHh-hcc-----CCcEEeeccchHH------HHH---hhhc
Confidence            5789999986 8999999988888999999999998877643 333     4333222222211      111   2234


Q ss_pred             CccEEEEcccCC
Q 019722          114 PLNLLINNAGKF  125 (336)
Q Consensus       114 ~id~lv~nAg~~  125 (336)
                      ..|+++.+.+..
T Consensus        91 ~~d~vi~~~~~~  102 (168)
T d1piwa2          91 TFDLIVVCASSL  102 (168)
T ss_dssp             CEEEEEECCSCS
T ss_pred             ccceEEEEecCC
Confidence            789999987753

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=96.80  E-value=0.00045  Score=54.37  Aligned_cols=43  Identities=33%  Similarity=0.478  Sum_probs=37.8

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHH
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAK   76 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~   76 (336)
                      .|.++||+||+||+|.+.++-....|++|+.+.+++++.+.+.
T Consensus        23 ~~~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~~~~~   65 (167)
T d1tt7a2          23 EKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLK   65 (167)
T ss_dssp             GGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHH
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHcCCceEEEecCHHHHHHHH
Confidence            5678999999999999999988889999999999988766543

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=96.78  E-value=0.0028  Score=49.41  Aligned_cols=74  Identities=19%  Similarity=0.270  Sum_probs=52.4

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCC
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNL  113 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  113 (336)
                      .|.+++|.|+ |++|...++.+...|++++++++++++.+ .++++     +... +  .|..+.....       ....
T Consensus        30 ~G~~VlI~Ga-G~vG~~a~qlak~~Ga~~i~~~~~~~~~~-~a~~l-----Gad~-~--i~~~~~~~~~-------~~~~   92 (168)
T d1uufa2          30 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKRE-AAKAL-----GADE-V--VNSRNADEMA-------AHLK   92 (168)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHH-HHHHH-----TCSE-E--EETTCHHHHH-------TTTT
T ss_pred             CCCEEEEecc-chHHHHHHHHhhcccccchhhccchhHHH-HHhcc-----CCcE-E--EECchhhHHH-------HhcC
Confidence            5789999985 99999999988889999999999888654 34444     3332 2  2455444322       1224


Q ss_pred             CccEEEEcccC
Q 019722          114 PLNLLINNAGK  124 (336)
Q Consensus       114 ~id~lv~nAg~  124 (336)
                      ++|++|.+.|.
T Consensus        93 ~~D~vid~~g~  103 (168)
T d1uufa2          93 SFDFILNTVAA  103 (168)
T ss_dssp             CEEEEEECCSS
T ss_pred             CCceeeeeeec
Confidence            79999999884

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=96.76  E-value=0.00082  Score=53.33  Aligned_cols=42  Identities=24%  Similarity=0.353  Sum_probs=37.2

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHH
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEA   75 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~   75 (336)
                      .+.++||+||+||+|...++..-..|++|+.+++++++.+.+
T Consensus        31 ~~~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k~~~~   72 (177)
T d1o89a2          31 QDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYL   72 (177)
T ss_dssp             GGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHH
T ss_pred             CCCcEEEEEccccchHHHHHHHHHcCCCeEEEecchhHHHHH
Confidence            456899999999999999999999999999999998876543

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=96.75  E-value=0.024  Score=42.54  Aligned_cols=114  Identities=19%  Similarity=0.168  Sum_probs=71.5

Q ss_pred             EEEeCCCChHHHHHHHHHHHCCC--EEEEeeCChHHHHHHHHHHHhhCC-CCceEEEeccCCCHHHHHHHHHHHHhcCCC
Q 019722           38 AIITGATSGIGAETARVLAKRGA--RLVLPARSLKAAEEAKARLASDCP-GSDIVVLPLDLSSLSSVRNFVSQFHSLNLP  114 (336)
Q Consensus        38 ~lItGgs~gIG~aia~~L~~~G~--~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  114 (336)
                      +.|.|+ |.+|.+++..|+.++.  +++++++++++++-....+....+ ..+......|.   +.           ...
T Consensus         3 I~IIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~~~~~~~~~~~~~~~~---~~-----------~~~   67 (140)
T d1a5za1           3 IGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGDY---AD-----------LKG   67 (140)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECCG---GG-----------GTT
T ss_pred             EEEECc-CHHHHHHHHHHHhCCCCCEEEEEecccccccchhccccccccccccccccCCcH---HH-----------hcC
Confidence            455686 8999999999999984  899999998877755555444211 22334333332   11           125


Q ss_pred             ccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCc
Q 019722          115 LNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSI  178 (336)
Q Consensus       115 id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~  178 (336)
                      -|++|.+||....+. .+   -.+.+..|    ..+++...+.+.+..    +++.++++|.+.
T Consensus        68 adivvitag~~~~~g-~~---r~dl~~~N----~~I~~~i~~~i~~~~----p~aivivvtNPv  119 (140)
T d1a5za1          68 SDVVIVAAGVPQKPG-ET---RLQLLGRN----ARVMKEIARNVSKYA----PDSIVIVVTNPV  119 (140)
T ss_dssp             CSEEEECCCCCCCSS-CC---HHHHHHHH----HHHHHHHHHHHHHHC----TTCEEEECSSSH
T ss_pred             CCEEEEecccccCCC-cc---hhhhhccc----cchHHHHHHHHHhcC----CCcEEEEeCCcH
Confidence            799999999754432 11   12344444    346777777777653    256777777653

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=96.72  E-value=0.0042  Score=48.75  Aligned_cols=78  Identities=18%  Similarity=0.238  Sum_probs=52.0

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcC
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGA-RLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLN  112 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  112 (336)
                      .|.+++|.|+ |++|...+..+...|+ +|+++++++++.+.+. ++     +. .+++  |..+.+..+ .++++.  .
T Consensus        28 ~g~~VlI~G~-G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a~-~~-----Ga-~~~i--~~~~~~~~~-~i~~~t--~   94 (174)
T d1f8fa2          28 PASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELAK-QL-----GA-THVI--NSKTQDPVA-AIKEIT--D   94 (174)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHH-HH-----TC-SEEE--ETTTSCHHH-HHHHHT--T
T ss_pred             CCCEEEEeCC-CHHHhhhhhcccccccceeeeeccHHHHHHHHH-Hc-----CC-eEEE--eCCCcCHHH-HHHHHc--C
Confidence            5788999987 8999999999988998 5666778887665433 33     32 2333  444433333 233332  2


Q ss_pred             CCccEEEEcccC
Q 019722          113 LPLNLLINNAGK  124 (336)
Q Consensus       113 ~~id~lv~nAg~  124 (336)
                      +++|++|.+.|.
T Consensus        95 gg~D~vid~~G~  106 (174)
T d1f8fa2          95 GGVNFALESTGS  106 (174)
T ss_dssp             SCEEEEEECSCC
T ss_pred             CCCcEEEEcCCc
Confidence            479999999984

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=96.69  E-value=0.039  Score=41.61  Aligned_cols=114  Identities=23%  Similarity=0.238  Sum_probs=67.7

Q ss_pred             EEEEeCCCChHHHHHHHHHHHCCC--EEEEeeCChH--HHHHHHHHHHh---hCC-CCceEEEeccCCCHHHHHHHHHHH
Q 019722           37 TAIITGATSGIGAETARVLAKRGA--RLVLPARSLK--AAEEAKARLAS---DCP-GSDIVVLPLDLSSLSSVRNFVSQF  108 (336)
Q Consensus        37 ~~lItGgs~gIG~aia~~L~~~G~--~V~~~~r~~~--~~~~~~~~l~~---~~~-~~~~~~~~~Dl~~~~~v~~~~~~~  108 (336)
                      .+.|+||+|.+|.+++..|+.+|.  +++++++++.  +++-....+..   ..+ ..++.....+  +.          
T Consensus         2 KV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~--d~----------   69 (145)
T d1hyea1           2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDE--NL----------   69 (145)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETT--CG----------
T ss_pred             EEEEECCCChHHHHHHHHHHhCCcccccccccchhhhHhhhcccccchhcccccccCCccccCCcc--hH----------
Confidence            378999999999999999999994  8999998763  33333333433   111 2223333221  11          


Q ss_pred             HhcCCCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcC
Q 019722          109 HSLNLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSS  176 (336)
Q Consensus       109 ~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS  176 (336)
                       +....-|++|.+||....+. .+.   .+.+..|.    .+++...+.+.+..     +..|+.+|.
T Consensus        70 -~~l~~aDvVVitAG~~~~~g-~sR---~dl~~~Na----~iv~~i~~~i~~~~-----~~~iivVtN  123 (145)
T d1hyea1          70 -RIIDESDVVIITSGVPRKEG-MSR---MDLAKTNA----KIVGKYAKKIAEIC-----DTKIFVITN  123 (145)
T ss_dssp             -GGGTTCSEEEECCSCCCCTT-CCH---HHHHHHHH----HHHHHHHHHHHHHC-----CCEEEECSS
T ss_pred             -HHhccceEEEEecccccCCC-CCh---hhhhhhhH----HHHHHHHHHHhccC-----CCeEEEEcC
Confidence             11235799999999754322 222   23444443    45666777776653     345555544

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.67  E-value=0.0049  Score=47.77  Aligned_cols=41  Identities=17%  Similarity=0.136  Sum_probs=35.7

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHH
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEA   75 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~   75 (336)
                      .|.+++|.|+ |++|...++.+...|++|+++++++++.+..
T Consensus        27 ~g~~VlV~Ga-G~vG~~~~~~ak~~G~~Vi~~~~~~~~~~~a   67 (166)
T d1llua2          27 PGQWVAISGI-GGLGHVAVQYARAMGLHVAAIDIDDAKLELA   67 (166)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred             CCCEEEEeec-cccHHHHHHHHHHcCCccceecchhhHHHhh
Confidence            4789999875 9999999999989999999999998887643

>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=96.63  E-value=0.022  Score=42.98  Aligned_cols=116  Identities=13%  Similarity=0.033  Sum_probs=72.1

Q ss_pred             EEEEeCCCChHHHHHHHHHHHCCC--EEEEeeCC--hHHHHHHHHHHHh-hCCCCceEEEeccCCCHHHHHHHHHHHHhc
Q 019722           37 TAIITGATSGIGAETARVLAKRGA--RLVLPARS--LKAAEEAKARLAS-DCPGSDIVVLPLDLSSLSSVRNFVSQFHSL  111 (336)
Q Consensus        37 ~~lItGgs~gIG~aia~~L~~~G~--~V~~~~r~--~~~~~~~~~~l~~-~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  111 (336)
                      .+.|+||+|.+|.+++..|+.++.  ++++++.+  .+.++-....+.. .....+..+...|.   +.           
T Consensus         2 KV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~~g~a~Dl~~~~~~~~~~~i~~~~~---~~-----------   67 (142)
T d1o6za1           2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGGY---ED-----------   67 (142)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECCG---GG-----------
T ss_pred             eEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecCCcccccceeecchhhcccccCCceEeeCCH---HH-----------
Confidence            578999999999999999999985  79999854  3334333333432 11133444444443   21           


Q ss_pred             CCCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCc
Q 019722          112 NLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSI  178 (336)
Q Consensus       112 ~~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~  178 (336)
                      ...-|++|..||....+. .+   =.+.++.|    ..+++...+.+.+..    +++.++++|.+.
T Consensus        68 ~~~aDiVvitaG~~~~~g-~~---R~dl~~~N----~~I~~~i~~~i~~~~----p~~i~ivvtNPv  122 (142)
T d1o6za1          68 TAGSDVVVITAGIPRQPG-QT---RIDLAGDN----APIMEDIQSSLDEHN----DDYISLTTSNPV  122 (142)
T ss_dssp             GTTCSEEEECCCCCCCTT-CC---HHHHHHHH----HHHHHHHHHHHHTTC----SCCEEEECCSSH
T ss_pred             hhhcCEEEEecccccccC-Cc---hhhHHHHH----HHHHHHHHHHHHhcC----CCceEEEecChH
Confidence            126799999999654322 22   23344444    356777777777653    357777776653

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=96.62  E-value=0.0055  Score=47.86  Aligned_cols=78  Identities=17%  Similarity=0.225  Sum_probs=51.5

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcC
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGA-RLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLN  112 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  112 (336)
                      .|.+++|.|+ |++|...++.+...|+ +|+++++++++++.+.+ +     +. .+++  |.. .+.++...+...  .
T Consensus        32 ~g~~vli~Ga-G~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~~~~-~-----ga-~~~i--~~~-~~~~~~~~~~~~--~   98 (172)
T d1h2ba2          32 PGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAER-L-----GA-DHVV--DAR-RDPVKQVMELTR--G   98 (172)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHH-T-----TC-SEEE--ETT-SCHHHHHHHHTT--T
T ss_pred             CCCEEEEeCC-ChHHHHHHHHHHhhcCcccccccchhHHHHHHhh-c-----cc-ceee--cCc-ccHHHHHHHhhC--C
Confidence            4789999885 9999999999988887 77888899877654332 1     22 2333  222 233444443221  2


Q ss_pred             CCccEEEEcccC
Q 019722          113 LPLNLLINNAGK  124 (336)
Q Consensus       113 ~~id~lv~nAg~  124 (336)
                      .++|++|.++|.
T Consensus        99 ~g~d~vid~~g~  110 (172)
T d1h2ba2          99 RGVNVAMDFVGS  110 (172)
T ss_dssp             CCEEEEEESSCC
T ss_pred             CCceEEEEecCc
Confidence            369999999984

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=96.60  E-value=0.002  Score=50.87  Aligned_cols=81  Identities=17%  Similarity=0.160  Sum_probs=56.8

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHh
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHS  110 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  110 (336)
                      .+++||.|+|.| +||.+++++..|.+.| +|.++.|+.++++++.+.+...........+..            ..+..
T Consensus        14 ~~~~~k~vlIlG-aGG~arai~~aL~~~~-~i~I~nR~~~ka~~l~~~~~~~~~~~~~~~~~~------------~~~~~   79 (177)
T d1nvta1          14 GRVKDKNIVIYG-AGGAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKKFGEEVKF------------SGLDV   79 (177)
T ss_dssp             CCCCSCEEEEEC-CSHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCCHHHHEEE------------ECTTC
T ss_pred             CCcCCCEEEEEC-CcHHHHHHHHHHcccc-ceeeehhhhhHHHHHHHHHHHhhchhhhhhhhh------------hhhhh
Confidence            468999999998 5789999999998777 999999999999988887765433221111110            00111


Q ss_pred             cCCCccEEEEcccCC
Q 019722          111 LNLPLNLLINNAGKF  125 (336)
Q Consensus       111 ~~~~id~lv~nAg~~  125 (336)
                      .....|++||+....
T Consensus        80 ~~~~~dliIn~tp~g   94 (177)
T d1nvta1          80 DLDGVDIIINATPIG   94 (177)
T ss_dssp             CCTTCCEEEECSCTT
T ss_pred             ccchhhhhccCCccc
Confidence            234679999987653

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=96.59  E-value=0.034  Score=42.21  Aligned_cols=121  Identities=12%  Similarity=0.051  Sum_probs=73.8

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhhC--CCCceEEEeccCCCHHHHHHHHHHHHhcC
Q 019722           36 VTAIITGATSGIGAETARVLAKRGA-RLVLPARSLKAAEEAKARLASDC--PGSDIVVLPLDLSSLSSVRNFVSQFHSLN  112 (336)
Q Consensus        36 k~~lItGgs~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  112 (336)
                      ..+.|.|+ |.+|.+++..|+.++. ++++++++++.++-....+....  ...+..+...+-  .           +..
T Consensus         4 ~KI~IIGa-G~VG~~~a~~l~~~~l~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~v~~~~~--~-----------~~~   69 (150)
T d1t2da1           4 AKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSNT--Y-----------DDL   69 (150)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEECC--G-----------GGG
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccCCcceeeecchhhhccccCCCcEEEeccc--c-----------ccc
Confidence            35666785 9999999998888885 89999998877665555554321  123333333221  1           112


Q ss_pred             CCccEEEEcccCCCCCCCCCc-hhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCc
Q 019722          113 LPLNLLINNAGKFAHQHAISE-DGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSI  178 (336)
Q Consensus       113 ~~id~lv~nAg~~~~~~~~~~-~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~  178 (336)
                      ..-|++|.++|....+.+.+. .+=.+.+..|.    .+++.+.+.+.+..    +++.++++|.+.
T Consensus        70 ~~advvvitag~~~~~g~~~~~~~R~~l~~~N~----~iv~~i~~~i~~~~----p~aivivvtNPv  128 (150)
T d1t2da1          70 AGADVVIVTAGFTKAPGKSDKEWNRDDLLPLNN----KIMIEIGGHIKKNC----PNAFIIVVTNPV  128 (150)
T ss_dssp             TTCSEEEECCSCSSCTTCCSTTCCGGGGHHHHH----HHHHHHHHHHHHHC----TTSEEEECSSSH
T ss_pred             CCCcEEEEecccccCCCCCccccchhHHHHHHH----HHHHHHHHHHHhcC----CCeEEEEecCch
Confidence            357999999997654422211 12233455553    56666777776653    256777777754

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=96.58  E-value=0.0066  Score=47.40  Aligned_cols=80  Identities=10%  Similarity=0.128  Sum_probs=53.1

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcC
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGA-RLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLN  112 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  112 (336)
                      .|.+++|.|+ +|+|...++.+...|+ +|+++++++++.+ .++++     +..- ++..+- +.+.+.+.++...  .
T Consensus        28 ~G~tVlI~Ga-GGvG~~aiq~ak~~G~~~vi~~~~~~~k~~-~ak~l-----Ga~~-~i~~~~-~~~~~~~~~~~~~--~   96 (176)
T d2fzwa2          28 PGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFA-RAKEF-----GATE-CINPQD-FSKPIQEVLIEMT--D   96 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHH-HHHHH-----TCSE-EECGGG-CSSCHHHHHHHHT--T
T ss_pred             CCCEEEEecc-hhHHHHHHHHHHHHhcCceEEEcccHHHHH-HHHHh-----CCcE-EEeCCc-hhhHHHHHHHHHc--C
Confidence            5789999987 6999999999999997 6778888887754 34444     3332 222111 1233444444432  2


Q ss_pred             CCccEEEEcccC
Q 019722          113 LPLNLLINNAGK  124 (336)
Q Consensus       113 ~~id~lv~nAg~  124 (336)
                      +++|++|.+.|.
T Consensus        97 ~g~D~vid~~G~  108 (176)
T d2fzwa2          97 GGVDYSFECIGN  108 (176)
T ss_dssp             SCBSEEEECSCC
T ss_pred             CCCcEeeecCCC
Confidence            479999999984

>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=96.49  E-value=0.02  Score=43.78  Aligned_cols=118  Identities=14%  Similarity=0.055  Sum_probs=69.2

Q ss_pred             EEEEeCCCChHHHHHHHHHHHCCC---------EEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHH
Q 019722           37 TAIITGATSGIGAETARVLAKRGA---------RLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQ  107 (336)
Q Consensus        37 ~~lItGgs~gIG~aia~~L~~~G~---------~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~  107 (336)
                      .+.|+||+|.+|.+++..|+..+.         +++...++.+.++.....+..... .....+...-.+    ...   
T Consensus         6 KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~----~~~---   77 (154)
T d1y7ta1           6 RVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAF-PLLAGLEATDDP----KVA---   77 (154)
T ss_dssp             EEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTC-TTEEEEEEESCH----HHH---
T ss_pred             EEEEECCCCHHHHHHHHHHHhccccccccchhHhHhccccchhhHcCchhhhhcccc-ccccccccCCch----hhh---
Confidence            789999999999999999998753         233345666666665555554322 233333322211    111   


Q ss_pred             HHhcCCCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCC
Q 019722          108 FHSLNLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSS  177 (336)
Q Consensus       108 ~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~  177 (336)
                          +...|++|..||....+ ..+.   ++.+..|    ...++.+.+.+.+...   ..+.|+++|.+
T Consensus        78 ----~~~advViitaG~~~~p-g~~r---~dl~~~N----~~i~~~~~~~i~k~a~---~~~~vivvsNP  132 (154)
T d1y7ta1          78 ----FKDADYALLVGAAPRKA-GMER---RDLLQVN----GKIFTEQGRALAEVAK---KDVKVLVVGNP  132 (154)
T ss_dssp             ----TTTCSEEEECCCCCCCT-TCCH---HHHHHHH----HHHHHHHHHHHHHHSC---TTCEEEECSSS
T ss_pred             ----cccccEEEeecCcCCCC-CCcH---HHHHHHH----HHHHHHHHHHHHHhCC---CCcEEEEecCc
Confidence                23689999999975432 2222   2333333    4567777777766421   13566666654

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=96.47  E-value=0.0049  Score=48.40  Aligned_cols=80  Identities=18%  Similarity=0.236  Sum_probs=53.8

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHH-HHHHHHHHHHh
Q 019722           33 LSSVTAIITGATSGIGAETARVLAKRGA-RLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLS-SVRNFVSQFHS  110 (336)
Q Consensus        33 l~gk~~lItGgs~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~-~v~~~~~~~~~  110 (336)
                      -.|.+++|.|+ ||+|...++.+...|+ +|+++++++++++... ++     +... ++  |.++.+ .+....+... 
T Consensus        26 ~~G~~VlV~Ga-GgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a~-~l-----Ga~~-~i--~~~~~d~~~~~~~~~~~-   94 (174)
T d1p0fa2          26 TPGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAI-EL-----GATE-CL--NPKDYDKPIYEVICEKT-   94 (174)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH-HT-----TCSE-EE--CGGGCSSCHHHHHHHHT-
T ss_pred             CCCCEEEEECC-CchhHHHHHHHHHcCCceeeccCChHHHHHHHH-Hc-----CCcE-EE--cCCCchhHHHHHHHHhc-
Confidence            35789999985 9999999999999997 8999999988876543 22     3332 22  222211 2333333222 


Q ss_pred             cCCCccEEEEcccC
Q 019722          111 LNLPLNLLINNAGK  124 (336)
Q Consensus       111 ~~~~id~lv~nAg~  124 (336)
                       .+++|++|-+.|.
T Consensus        95 -~~G~d~vid~~g~  107 (174)
T d1p0fa2          95 -NGGVDYAVECAGR  107 (174)
T ss_dssp             -TSCBSEEEECSCC
T ss_pred             -CCCCcEEEEcCCC
Confidence             3479999999884

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=96.46  E-value=0.058  Score=40.54  Aligned_cols=115  Identities=14%  Similarity=0.148  Sum_probs=69.6

Q ss_pred             EEEEeCCCChHHHHHHHHHHHCCC--EEEEeeCChHHHHHHHHHHHhhCC-CCceEEEeccCCCHHHHHHHHHHHHhcCC
Q 019722           37 TAIITGATSGIGAETARVLAKRGA--RLVLPARSLKAAEEAKARLASDCP-GSDIVVLPLDLSSLSSVRNFVSQFHSLNL  113 (336)
Q Consensus        37 ~~lItGgs~gIG~aia~~L~~~G~--~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  113 (336)
                      .+.|+|+ |.+|.+++..|+.+|.  ++++++++++.++-....++...+ .....+...+-  .+.           ..
T Consensus         3 Ki~IIGa-G~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~Dl~~a~~~~~~~~i~~~~~--~~~-----------~~   68 (143)
T d1llda1           3 KLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGSDD--PEI-----------CR   68 (143)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEESC--GGG-----------GT
T ss_pred             EEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccccchhHHHHHHhccccCCCceeecCCC--HHH-----------hh
Confidence            3556685 9999999999999995  899999999877655555543211 11222222211  111           11


Q ss_pred             CccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCC
Q 019722          114 PLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSS  177 (336)
Q Consensus       114 ~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~  177 (336)
                      .-|++|..||....+. .+.   .+.+..|.    .+++...+.+.+..    +++.++++|.+
T Consensus        69 daDvVVitaG~~~~~g-~~R---~dl~~~N~----~i~~~i~~~i~~~~----p~ai~ivvtNP  120 (143)
T d1llda1          69 DADMVVITAGPRQKPG-QSR---LELVGATV----NILKAIMPNLVKVA----PNAIYMLITNP  120 (143)
T ss_dssp             TCSEEEECCCCCCCTT-CCH---HHHHHHHH----HHHHHHHHHHHHHC----TTSEEEECCSS
T ss_pred             CCcEEEEecccccCCC-Cch---hhhhhhhH----HHHHHHHHHHHhhC----CCeEEEEeCCc
Confidence            4699999999754331 222   23444443    56677777776653    24666666664

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=96.43  E-value=0.0026  Score=49.74  Aligned_cols=45  Identities=20%  Similarity=0.356  Sum_probs=39.4

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHH
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGA-RLVLPARSLKAAEEAKARL   79 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~l   79 (336)
                      ++|.++|.|+ ||.+++++..|.+.|+ +|.++.|+.++++.+.+.+
T Consensus        16 ~~~~vlIlGa-GGaarai~~aL~~~g~~~I~I~nR~~~ka~~L~~~~   61 (167)
T d1npya1          16 KNAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALY   61 (167)
T ss_dssp             TTSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHH
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEecccHHHHHHHHHhh
Confidence            5788999985 9999999999999997 8999999999888776654

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=96.42  E-value=0.0048  Score=48.46  Aligned_cols=80  Identities=15%  Similarity=0.153  Sum_probs=53.2

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcC
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGA-RLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLN  112 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  112 (336)
                      .|.+|+|.| +|+||...++.+...|+ +|+++++++++.+. .+++     +.. .++...- ..+.+....+.+.  .
T Consensus        28 ~G~~VlV~G-~G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~~-a~~~-----Ga~-~~i~~~~-~~~~~~~~~~~~~--~   96 (174)
T d1e3ia2          28 PGSTCAVFG-LGCVGLSAIIGCKIAGASRIIAIDINGEKFPK-AKAL-----GAT-DCLNPRE-LDKPVQDVITELT--A   96 (174)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEECSCGGGHHH-HHHT-----TCS-EEECGGG-CSSCHHHHHHHHH--T
T ss_pred             CCCEEEEEC-CChHHHHHHHHHHHhCCceeeeeccchHHHHH-HHHh-----CCC-cccCCcc-chhhhhhhHhhhh--c
Confidence            568999997 59999999999999998 78889999887543 3332     322 2232111 1223333333333  3


Q ss_pred             CCccEEEEcccC
Q 019722          113 LPLNLLINNAGK  124 (336)
Q Consensus       113 ~~id~lv~nAg~  124 (336)
                      +++|++|.+.|.
T Consensus        97 ~G~d~vie~~G~  108 (174)
T d1e3ia2          97 GGVDYSLDCAGT  108 (174)
T ss_dssp             SCBSEEEESSCC
T ss_pred             CCCcEEEEeccc
Confidence            479999999984

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=96.41  E-value=0.0014  Score=45.97  Aligned_cols=38  Identities=13%  Similarity=0.203  Sum_probs=34.1

Q ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChH
Q 019722           32 NLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLK   70 (336)
Q Consensus        32 ~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~   70 (336)
                      +++||+++|.|. |..|.++|+.|.++|++|++.+.+..
T Consensus         2 ~~~~K~v~ViGl-G~sG~s~a~~L~~~g~~v~~~D~~~~   39 (93)
T d2jfga1           2 DYQGKNVVIIGL-GLTGLSCVDFFLARGVTPRVMDTRMT   39 (93)
T ss_dssp             CCTTCCEEEECC-SHHHHHHHHHHHHTTCCCEEEESSSS
T ss_pred             CcCCCEEEEEeE-CHHHHHHHHHHHHCCCEEEEeeCCcC
Confidence            689999999986 77899999999999999999997654

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=96.39  E-value=0.015  Score=43.84  Aligned_cols=114  Identities=20%  Similarity=0.167  Sum_probs=65.2

Q ss_pred             EEEEeCCCChHHHHHHHHHHHCCC--EEEEeeCChHHHHHHHHHHHhhCCC-CceEEEeccCCCHHHHHHHHHHHHhcCC
Q 019722           37 TAIITGATSGIGAETARVLAKRGA--RLVLPARSLKAAEEAKARLASDCPG-SDIVVLPLDLSSLSSVRNFVSQFHSLNL  113 (336)
Q Consensus        37 ~~lItGgs~gIG~aia~~L~~~G~--~V~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  113 (336)
                      .+.|.|+ |.+|.+++..|+.++.  ++++++++++.++-....+....+- ........|   .+           ...
T Consensus         3 KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~---~~-----------~~~   67 (142)
T d1y6ja1           3 KVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAGD---YS-----------DVK   67 (142)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC--C---GG-----------GGT
T ss_pred             eEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeeccCcccCCCeeEeeCc---HH-----------HhC
Confidence            4555586 9999999999999985  8999999988765555555542211 122222211   11           123


Q ss_pred             CccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCC
Q 019722          114 PLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSS  177 (336)
Q Consensus       114 ~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~  177 (336)
                      .-|++|..||....+.    +.-.+.+..|.    .+++.+.+.+.+..    +++.++++|.+
T Consensus        68 ~adivvitag~~~~~~----~~r~~l~~~N~----~i~~~i~~~i~~~~----p~ai~ivvtNP  119 (142)
T d1y6ja1          68 DCDVIVVTAGANRKPG----ETRLDLAKKNV----MIAKEVTQNIMKYY----NHGVILVVSNP  119 (142)
T ss_dssp             TCSEEEECCCC----------CHHHHHHHHH----HHHHHHHHHHHHHC----CSCEEEECSSS
T ss_pred             CCceEEEecccccCcC----cchhHHhhHHH----HHHHHHHHHhhccC----CCceEEEecCh
Confidence            5799999999654321    12223444443    56667777776653    24667777665

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=96.38  E-value=0.0065  Score=48.63  Aligned_cols=80  Identities=15%  Similarity=0.111  Sum_probs=53.3

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcC
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGA-RLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLN  112 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  112 (336)
                      .|.+|+|.|+ |++|...+..+...|+ +|+++++++++++.+.+ +     +.. ++  .|-.+.+..+.+.+..  ..
T Consensus        25 ~G~tVlV~Ga-G~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a~~-~-----Ga~-~~--~~~~~~~~~~~i~~~t--~g   92 (195)
T d1kola2          25 PGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHAKA-Q-----GFE-IA--DLSLDTPLHEQIAALL--GE   92 (195)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH-T-----TCE-EE--ETTSSSCHHHHHHHHH--SS
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHhhcccceeeecccchhhHhhhh-c-----ccc-EE--EeCCCcCHHHHHHHHh--CC
Confidence            5789999985 8999888888888887 89999999887764332 2     322 22  2333333333333322  22


Q ss_pred             CCccEEEEcccCC
Q 019722          113 LPLNLLINNAGKF  125 (336)
Q Consensus       113 ~~id~lv~nAg~~  125 (336)
                      .++|++|.+.|..
T Consensus        93 ~g~D~vid~vG~~  105 (195)
T d1kola2          93 PEVDCAVDAVGFE  105 (195)
T ss_dssp             SCEEEEEECCCTT
T ss_pred             CCcEEEEECcccc
Confidence            4699999999853

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=96.33  E-value=0.0057  Score=50.79  Aligned_cols=81  Identities=21%  Similarity=0.318  Sum_probs=60.3

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCC-------------------hHHHHHHHHHHHhhCCCCceEEEe
Q 019722           33 LSSVTAIITGATSGIGAETARVLAKRGA-RLVLPARS-------------------LKAAEEAKARLASDCPGSDIVVLP   92 (336)
Q Consensus        33 l~gk~~lItGgs~gIG~aia~~L~~~G~-~V~~~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~~~   92 (336)
                      |++++|+|.| .||+|.+++..|+..|. ++.+++.+                   ..+.+.+.+.+++.+|+.++..+.
T Consensus        28 L~~~~VliiG-~GglGs~va~~La~~Gvg~i~lvD~D~Ve~sNL~RQ~l~~~~diG~~K~~~a~~~l~~~np~~~i~~~~  106 (247)
T d1jw9b_          28 LKDSRVLIVG-LGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVN  106 (247)
T ss_dssp             HHHCEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEEC
T ss_pred             HhCCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCcccchhhhhhhccccHhhcCchHHHHHHHHHHHhhcccchhhhh
Confidence            6789999999 88999999999999998 89998754                   236777778888888777787776


Q ss_pred             ccCCCHHHHHHHHHHHHhcCCCccEEEEcc
Q 019722           93 LDLSSLSSVRNFVSQFHSLNLPLNLLINNA  122 (336)
Q Consensus        93 ~Dl~~~~~v~~~~~~~~~~~~~id~lv~nA  122 (336)
                      ..+++. ......+       ..|++|.+.
T Consensus       107 ~~~~~~-~~~~~~~-------~~divid~~  128 (247)
T d1jw9b_         107 ALLDDA-ELAALIA-------EHDLVLDCT  128 (247)
T ss_dssp             SCCCHH-HHHHHHH-------TSSEEEECC
T ss_pred             hhhhhc-ccccccc-------ccceeeecc
Confidence            655433 3333222       568887654

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=96.29  E-value=0.0061  Score=44.13  Aligned_cols=60  Identities=20%  Similarity=0.264  Sum_probs=43.5

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCC
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLS   96 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~   96 (336)
                      ..+++||+++|.|| |.+|..-++.|++.|++|++++........   .+..   ..++.+..-+..
T Consensus         7 ~l~l~~k~vlVvG~-G~va~~ka~~ll~~ga~v~v~~~~~~~~~~---~~~~---~~~i~~~~~~~~   66 (113)
T d1pjqa1           7 FCQLRDRDCLIVGG-GDVAERKARLLLEAGARLTVNALTFIPQFT---VWAN---EGMLTLVEGPFD   66 (113)
T ss_dssp             EECCBTCEEEEECC-SHHHHHHHHHHHHTTBEEEEEESSCCHHHH---HHHT---TTSCEEEESSCC
T ss_pred             EEEeCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeccCChHHH---HHHh---cCCceeeccCCC
Confidence            45899999999995 569999999999999999999876543222   1111   245666665543

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=96.28  E-value=0.031  Score=42.23  Aligned_cols=117  Identities=16%  Similarity=0.159  Sum_probs=68.7

Q ss_pred             EEEEeCCCChHHHHHHHHHHHC-C--CEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCC
Q 019722           37 TAIITGATSGIGAETARVLAKR-G--ARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNL  113 (336)
Q Consensus        37 ~~lItGgs~gIG~aia~~L~~~-G--~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  113 (336)
                      .+.|+|++|.+|.+++..|+.+ +  .++++++..+. .+-....+...........+ ..-.+.   ..+.        
T Consensus         2 KV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~~-~~g~a~Dl~h~~~~~~~~~~-~~~~~~---~~~~--------   68 (145)
T d2cmda1           2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPV-TPGVAVDLSHIPTAVKIKGF-SGEDAT---PALE--------   68 (145)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSSTT-HHHHHHHHHTSCSSCEEEEE-CSSCCH---HHHT--------
T ss_pred             EEEEEcCCChHHHHHHHHHHhCCCCCcEEEEeccccc-chhHHHHHHCCccccCCcEE-EcCCCc---cccC--------
Confidence            4679999999999999988754 4  58999998654 33333444432112222222 122222   2211        


Q ss_pred             CccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCc
Q 019722          114 PLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSI  178 (336)
Q Consensus       114 ~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~  178 (336)
                      .-|++|..||....+. .+.   .+.+..|.    ..++...+.+.+..    +++.+|++|.+.
T Consensus        69 ~aDvvvitaG~~~k~g-~~R---~dl~~~N~----~i~~~v~~~i~~~~----p~aivivvtNPv  121 (145)
T d2cmda1          69 GADVVLISAGVRRKPG-MDR---SDLFNVNA----GIVKNLVQQVAKTC----PKACIGIITNPV  121 (145)
T ss_dssp             TCSEEEECCSCCCCTT-CCG---GGGHHHHH----HHHHHHHHHHHHHC----TTSEEEECSSSH
T ss_pred             CCCEEEECCCccCCCC-cch---hhHHHHHH----HHHHHHHHHHHhhC----CCcEEEEccCCc
Confidence            4699999999754332 222   33455553    45566666666543    256788888764

>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

Probab=96.27  E-value=0.054  Score=42.21  Aligned_cols=118  Identities=14%  Similarity=-0.052  Sum_probs=68.2

Q ss_pred             EEEEeCCCChHHHHHHHHHHHCCC-------EEEEeeCCh--HHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHH
Q 019722           37 TAIITGATSGIGAETARVLAKRGA-------RLVLPARSL--KAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQ  107 (336)
Q Consensus        37 ~~lItGgs~gIG~aia~~L~~~G~-------~V~~~~r~~--~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~  107 (336)
                      .+.||||+|.||.+++..|++...       .+.+.+.+.  ..++....++........-.....  ++..   .    
T Consensus        26 kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~~~l~g~~mdl~d~a~~~~~~~~~~--~~~~---~----   96 (175)
T d7mdha1          26 NIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVSIG--IDPY---E----   96 (175)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEE--SCHH---H----
T ss_pred             EEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccccchhcchhhhhcccccccccCcccc--ccch---h----
Confidence            699999999999999999997532       566666554  344555555544322111122211  1111   1    


Q ss_pred             HHhcCCCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCC
Q 019722          108 FHSLNLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSS  177 (336)
Q Consensus       108 ~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~  177 (336)
                         .+...|++|..+|....+ .   +.-.+.+..|    ..+++...+.+.+...   ...+|+.++.+
T Consensus        97 ---~~~~aDvVvi~ag~~rkp-g---~tR~Dll~~N----~~I~k~~~~~i~~~a~---~~~~vlvv~NP  152 (175)
T d7mdha1          97 ---VFEDVDWALLIGAKPRGP-G---MERAALLDIN----GQIFADQGKALNAVAS---KNVKVLVVGNP  152 (175)
T ss_dssp             ---HTTTCSEEEECCCCCCCT-T---CCHHHHHHHH----HHHHHHHHHHHHHHSC---TTCEEEECSSS
T ss_pred             ---hccCCceEEEeeccCCCC-C---CcHHHHHHHH----HHHHHHHHHHHHhhCC---CCcEEEEecCc
Confidence               133789999999975432 2   2334455555    4566777777766421   12456666554

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=96.27  E-value=0.0088  Score=46.19  Aligned_cols=41  Identities=20%  Similarity=0.151  Sum_probs=35.2

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHH
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEA   75 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~   75 (336)
                      .|.+++|.| +|++|...+..+...|++|+++++++++.+..
T Consensus        27 ~g~~vlv~G-~G~iG~~a~~~a~~~g~~v~~~~~~~~r~~~~   67 (168)
T d1rjwa2          27 PGEWVAIYG-IGGLGHVAVQYAKAMGLNVVAVDIGDEKLELA   67 (168)
T ss_dssp             TTCEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred             CCCEEEEee-cccchhhhhHHHhcCCCeEeccCCCHHHhhhh
Confidence            467899986 59999999999999999999999999887644

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.15  E-value=0.0063  Score=48.59  Aligned_cols=44  Identities=23%  Similarity=0.300  Sum_probs=38.2

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHH
Q 019722           36 VTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLA   80 (336)
Q Consensus        36 k~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~   80 (336)
                      |.+.|.|+ |-+|..||..++..|++|++.+++++.+++..+.++
T Consensus         5 kkvaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~a~~~i~   48 (192)
T d1f0ya2           5 KHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGIE   48 (192)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHH
T ss_pred             EEEEEECc-CHHHHHHHHHHHhCCCcEEEEECChHHHHHHHhhHH
Confidence            67888886 789999999999999999999999988776666554

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=96.15  E-value=0.011  Score=45.13  Aligned_cols=76  Identities=16%  Similarity=0.132  Sum_probs=59.2

Q ss_pred             EEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCCCcc
Q 019722           37 TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLPLN  116 (336)
Q Consensus        37 ~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id  116 (336)
                      .++|.|. +.+|..+++.|.++|.+|+++..+++...+..++..    ...+.++.+|.++++.++++-      ....+
T Consensus         5 HiII~G~-g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~~~~----~~~~~vi~Gd~~d~~~L~~a~------i~~a~   73 (153)
T d1id1a_           5 HFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRL----GDNADVIPGDSNDSSVLKKAG------IDRCR   73 (153)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHH----CTTCEEEESCTTSHHHHHHHT------TTTCS
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCEEEEeccchhHHHHHHHhh----cCCcEEEEccCcchHHHHHhc------cccCC
Confidence            4677775 799999999999999999999999887666666554    347889999999998776643      23578


Q ss_pred             EEEEccc
Q 019722          117 LLINNAG  123 (336)
Q Consensus       117 ~lv~nAg  123 (336)
                      .+|...+
T Consensus        74 ~vi~~~~   80 (153)
T d1id1a_          74 AILALSD   80 (153)
T ss_dssp             EEEECSS
T ss_pred             EEEEccc
Confidence            8876654

>d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: UBA3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.14  E-value=0.0028  Score=57.28  Aligned_cols=103  Identities=19%  Similarity=0.297  Sum_probs=69.0

Q ss_pred             hHHHHHhhcCCCCCCCCCccccccCCCCC----CCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCC----------
Q 019722            4 TVKYLLGSAGASGYGSKSTAEQVTDGCPN----LSSVTAIITGATSGIGAETARVLAKRGA-RLVLPARS----------   68 (336)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----l~gk~~lItGgs~gIG~aia~~L~~~G~-~V~~~~r~----------   68 (336)
                      .|..|+.+.|+     |+.++-.+ |.-.    |.+..|||.|+ ||||.++++.|+..|. ++.+++.+          
T Consensus         8 ~~~~~~~r~~~-----~~~~~~~~-~~e~~~~~l~~~kVlvvG~-GglG~ei~k~L~~~Gvg~i~lvD~D~Ve~sNL~RQ   80 (426)
T d1yovb1           8 HVKKFLERSGP-----FTHPDFEP-STESLQFLLDTCKVLVIGA-GGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQ   80 (426)
T ss_dssp             HHHHHHHSCCT-----TCCTTCCC-CSSHHHHHHHHCCEEEECS-STTHHHHHHHHHTTTCCCEEEECCCBCCGGGGGTC
T ss_pred             hHHHHHhcCCC-----CcCccccc-ChHHHHHHHhcCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEECCCcchhhhccc
Confidence            45667776654     44333222 2222    46678999996 7899999999999998 88888754          


Q ss_pred             ---------hHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCCCccEEEEcc
Q 019722           69 ---------LKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLPLNLLINNA  122 (336)
Q Consensus        69 ---------~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~lv~nA  122 (336)
                               ..+++.+.+.+++.+|+.++..+..++.+..  ..++       ...|++|.+.
T Consensus        81 flf~~~diG~~Ka~~a~~~l~~~np~v~i~~~~~~i~~~~--~~~~-------~~~DlVi~~~  134 (426)
T d1yovb1          81 FLFRPKDIGRPKAEVAAEFLNDRVPNCNVVPHFNKIQDFN--DTFY-------RQFHIIVCGL  134 (426)
T ss_dssp             TTCCGGGTTSBHHHHHHHHHHHHSTTCCCEEECSCGGGBC--HHHH-------TTCSEEEECC
T ss_pred             ccCChhHcCcHHHHHHHHHHHhhCCCCceEeeeccccchH--HHHH-------Hhcchheecc
Confidence                     2366667777777777778887777665432  1222       2568887654

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=96.11  E-value=0.023  Score=44.34  Aligned_cols=85  Identities=14%  Similarity=0.151  Sum_probs=58.6

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHH---------------HhhCCCCceEEEeccCCCHHH
Q 019722           36 VTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARL---------------ASDCPGSDIVVLPLDLSSLSS  100 (336)
Q Consensus        36 k~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l---------------~~~~~~~~~~~~~~Dl~~~~~  100 (336)
                      +.+-|.| -|-+|.++|+.|+++|++|++++|++++.+++.++-               ....  .....+...+.+.+.
T Consensus         3 ~nIg~IG-lG~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~--~~~~~ii~~~~~~~~   79 (176)
T d2pgda2           3 ADIALIG-LAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVLGAHSLEEMVSKL--KKPRRIILLVKAGQA   79 (176)
T ss_dssp             BSEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHHB--CSSCEEEECSCTTHH
T ss_pred             CcEEEEe-EhHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHhccccccccchhhhhhhhhhh--cccceEEEecCchHH
Confidence            4456676 599999999999999999999999999888765431               1111  122233334666778


Q ss_pred             HHHHHHHHHhcCCCccEEEEccc
Q 019722          101 VRNFVSQFHSLNLPLNLLINNAG  123 (336)
Q Consensus       101 v~~~~~~~~~~~~~id~lv~nAg  123 (336)
                      +..+.+.+.....+=+++|.+..
T Consensus        80 v~~v~~~l~~~~~~g~iiid~sT  102 (176)
T d2pgda2          80 VDNFIEKLVPLLDIGDIIIDGGN  102 (176)
T ss_dssp             HHHHHHHHHHHCCTTCEEEECSC
T ss_pred             HHHHHHHHHhccccCcEEEecCc
Confidence            88888777765544466666554

>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=96.10  E-value=0.003  Score=47.97  Aligned_cols=116  Identities=18%  Similarity=0.178  Sum_probs=67.8

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhhC--CCCceEEEe-ccCCCHHHHHHHHHHHHhc
Q 019722           36 VTAIITGATSGIGAETARVLAKRGA-RLVLPARSLKAAEEAKARLASDC--PGSDIVVLP-LDLSSLSSVRNFVSQFHSL  111 (336)
Q Consensus        36 k~~lItGgs~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~-~Dl~~~~~v~~~~~~~~~~  111 (336)
                      |.+.|+|+ |.+|.++|..|+.++. ++++++.+++.++.....+....  .+....+.. .|.   +.           
T Consensus         2 ~KI~IIGa-G~VG~~~A~~l~~~~l~dl~l~D~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~d~---~~-----------   66 (142)
T d1uxja1           2 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNNY---AD-----------   66 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCG---GG-----------
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCcceEEEEeeccccchhHHHHhhccccccCCCCEEEecCcH---HH-----------
Confidence            56667785 9999999999999885 99999988876655444443210  011222221 122   11           


Q ss_pred             CCCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCc
Q 019722          112 NLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSI  178 (336)
Q Consensus       112 ~~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~  178 (336)
                      ...-|++|.+||....+. .+.   .+.+..|.    .+++...+.+.+..    +++.++++|.+.
T Consensus        67 ~~~advvvitag~~~~~~-~~r---~dl~~~N~----~i~~~i~~~i~k~~----p~aivivvtNPv  121 (142)
T d1uxja1          67 TANSDVIVVTSGAPRKPG-MSR---EDLIKVNA----DITRACISQAAPLS----PNAVIIMVNNPL  121 (142)
T ss_dssp             GTTCSEEEECCSCC-------------CHHHHH----HHHHHHHHHHGGGC----TTCEEEECSSSH
T ss_pred             hcCCCEEEEeeeccCCcC-cch---hHHHhHHH----HHHHHHHHHHhccC----CCceEEEeCCch
Confidence            125799999999754331 121   23344443    47778888877643    256777766653

>d1wy7a1 c.66.1.32 (A:4-204) Hypothetical protein PH1948 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein PH1948
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=96.04  E-value=0.038  Score=44.11  Aligned_cols=78  Identities=17%  Similarity=0.108  Sum_probs=58.9

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGA-RLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQF  108 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~  108 (336)
                      ..+++|+++|=.|+++|.   ++..++.+|+ +|+.++.++..++.+.+.++..  +.+..++..|+...          
T Consensus        42 ~~dl~g~~vLDlg~GtG~---l~i~a~~~g~~~v~~vdi~~~~~~~a~~N~~~~--~~~~~~~~~d~~~~----------  106 (201)
T d1wy7a1          42 LGDIEGKVVADLGAGTGV---LSYGALLLGAKEVICVEVDKEAVDVLIENLGEF--KGKFKVFIGDVSEF----------  106 (201)
T ss_dssp             TTSSTTCEEEEETCTTCH---HHHHHHHTTCSEEEEEESCHHHHHHHHHHTGGG--TTSEEEEESCGGGC----------
T ss_pred             cCCCCCCEEEECcCcchH---HHHHHHHcCCCEEEEEcCcHHHHHHHHHHHHHc--CCCceEEECchhhh----------
Confidence            567899999988877662   2334567786 8999999999888887776654  56788888886432          


Q ss_pred             HhcCCCccEEEEcccCC
Q 019722          109 HSLNLPLNLLINNAGKF  125 (336)
Q Consensus       109 ~~~~~~id~lv~nAg~~  125 (336)
                         ..++|++|.|..+.
T Consensus       107 ---~~~fD~Vi~nPP~~  120 (201)
T d1wy7a1         107 ---NSRVDIVIMNPPFG  120 (201)
T ss_dssp             ---CCCCSEEEECCCCS
T ss_pred             ---CCcCcEEEEcCccc
Confidence               35799999998753

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=95.96  E-value=0.024  Score=43.95  Aligned_cols=79  Identities=18%  Similarity=0.271  Sum_probs=51.7

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHH-HHHHHHHHHHhc
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGA-RLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLS-SVRNFVSQFHSL  111 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~-~v~~~~~~~~~~  111 (336)
                      .|.+++|.| ++|+|...+..+...|. +|+.+++++++++...+ +     +.. +++  |..+.+ .+....+...  
T Consensus        28 ~g~~VlI~G-~Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a~~-~-----GAd-~~i--n~~~~~~~~~~~~~~~~--   95 (175)
T d1cdoa2          28 PGSTCAVFG-LGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKV-F-----GAT-DFV--NPNDHSEPISQVLSKMT--   95 (175)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH-T-----TCC-EEE--CGGGCSSCHHHHHHHHH--
T ss_pred             CCCEEEEEe-cCCccchHHHHHHHHhhchheeecchHHHHHHHHH-c-----CCc-EEE--cCCCcchhHHHHHHhhc--
Confidence            578999998 47788888888888887 79999999887754332 2     322 233  222222 2233333332  


Q ss_pred             CCCccEEEEcccC
Q 019722          112 NLPLNLLINNAGK  124 (336)
Q Consensus       112 ~~~id~lv~nAg~  124 (336)
                      -+++|+++.+.|.
T Consensus        96 ~~G~d~vid~~G~  108 (175)
T d1cdoa2          96 NGGVDFSLECVGN  108 (175)
T ss_dssp             TSCBSEEEECSCC
T ss_pred             cCCcceeeeecCC
Confidence            2479999999984

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=95.94  E-value=0.089  Score=39.29  Aligned_cols=115  Identities=19%  Similarity=0.148  Sum_probs=67.4

Q ss_pred             EEEeCCCChHHHHHHHHHHHCCC--EEEEeeCChHHHHHHHHHHHhhC--CCCceEEEeccCCCHHHHHHHHHHHHhcCC
Q 019722           38 AIITGATSGIGAETARVLAKRGA--RLVLPARSLKAAEEAKARLASDC--PGSDIVVLPLDLSSLSSVRNFVSQFHSLNL  113 (336)
Q Consensus        38 ~lItGgs~gIG~aia~~L~~~G~--~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  113 (336)
                      +.|+|+ |.+|.+++..|+.+|.  ++++++.+++.++-....+....  ...+..+...+  +.+.           +.
T Consensus         3 I~IIGa-G~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d~~~~~~~~~~~~~i~~~~--~~~~-----------~~   68 (142)
T d1guza1           3 ITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGSN--DYAD-----------TA   68 (142)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEES--CGGG-----------GT
T ss_pred             EEEECc-CHHHHHHHHHHHhCCCCceEEEeccccccchhhhhhhhcccchhcccceEEecC--CHHH-----------hc
Confidence            556685 9999999999999984  89999998876654443333210  02233333221  1211           22


Q ss_pred             CccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCc
Q 019722          114 PLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSI  178 (336)
Q Consensus       114 ~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~  178 (336)
                      .-|++|.+||....+.. +   =.+.++.|.    .+++...+.+.+..    +++-++++|.+.
T Consensus        69 dadvvvitag~~~~~g~-~---r~~l~~~N~----~i~~~i~~~i~~~~----p~aivivvtNPv  121 (142)
T d1guza1          69 NSDIVIITAGLPRKPGM-T---REDLLMKNA----GIVKEVTDNIMKHS----KNPIIIVVSNPL  121 (142)
T ss_dssp             TCSEEEECCSCCCCTTC-C---HHHHHHHHH----HHHHHHHHHHHHHC----SSCEEEECCSSH
T ss_pred             CCeEEEEEEecCCCCCC-c---hHHHHHHHH----HHHHHHHHHhhccC----CCeEEEEecCCh
Confidence            57999999997543311 1   123334343    35566666665543    246677666643

>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=95.90  E-value=0.03  Score=42.16  Aligned_cols=114  Identities=18%  Similarity=0.123  Sum_probs=69.2

Q ss_pred             EEEeCCCChHHHHHHHHHHHCCC--EEEEeeCChHHHHHHHHHHHhhC--CCCceEEEe-ccCCCHHHHHHHHHHHHhcC
Q 019722           38 AIITGATSGIGAETARVLAKRGA--RLVLPARSLKAAEEAKARLASDC--PGSDIVVLP-LDLSSLSSVRNFVSQFHSLN  112 (336)
Q Consensus        38 ~lItGgs~gIG~aia~~L~~~G~--~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~-~Dl~~~~~v~~~~~~~~~~~  112 (336)
                      +.|.|+ |.+|.+++..|+.+|.  ++++++.+++.++-....+....  .+....... .|.   +           ..
T Consensus         3 I~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~alDl~~~~~~~~~~~~i~~~~d~---~-----------~~   67 (142)
T d1ojua1           3 LGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGADY---S-----------LL   67 (142)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESCG---G-----------GG
T ss_pred             EEEECc-CHHHHHHHHHHHhcCcCceEEEEecccchhhHHHHHHhhhccccCCCCccccCCCH---H-----------Hh
Confidence            456685 9999999999999985  79999999988765555554321  122223332 232   1           12


Q ss_pred             CCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCc
Q 019722          113 LPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSI  178 (336)
Q Consensus       113 ~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~  178 (336)
                      ..-|++|..||....+. .+   -.+.+..|    ...++...+.+.+..    +++.++++|.+.
T Consensus        68 ~~adiVvitag~~~~~g-~~---r~~l~~~n----~~i~~~i~~~i~~~~----p~aivivvtNPv  121 (142)
T d1ojua1          68 KGSEIIVVTAGLARKPG-MT---RLDLAHKN----AGIIKDIAKKIVENA----PESKILVVTNPM  121 (142)
T ss_dssp             TTCSEEEECCCCCCCSS-CC---HHHHHHHH----HHHHHHHHHHHHTTS----TTCEEEECSSSH
T ss_pred             ccccEEEEeccccCCCC-Cc---hHHHHHHh----hHHHHHHHHHHHhhC----CCcEEEEecCCh
Confidence            25799999999654331 12   23333333    346666677776643    256777777653

>d1p9oa_ c.72.3.1 (A:) Phosphopantothenoylcysteine synthetase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Phosphopantothenoylcysteine synthetase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.82  E-value=0.013  Score=49.92  Aligned_cols=25  Identities=20%  Similarity=0.294  Sum_probs=22.0

Q ss_pred             CChHHHHHHHHHHHCCCEEEEeeCC
Q 019722           44 TSGIGAETARVLAKRGARLVLPARS   68 (336)
Q Consensus        44 s~gIG~aia~~L~~~G~~V~~~~r~   68 (336)
                      ||-.|.++|++|..+|+.|+++.+.
T Consensus        45 SGk~G~alA~~~~~~Ga~V~li~g~   69 (290)
T d1p9oa_          45 SGRRGATSAEAFLAAGYGVLFLYRA   69 (290)
T ss_dssp             CCHHHHHHHHHHHHTTCEEEEEEET
T ss_pred             chHHHHHHHHHHHHcCCEEEEEecC
Confidence            5689999999999999999988643

>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=95.69  E-value=0.12  Score=39.21  Aligned_cols=118  Identities=13%  Similarity=0.012  Sum_probs=65.0

Q ss_pred             EEEEeCCCChHHHHHHHHHHHCCC-------EEEEeeCCh--HHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHH
Q 019722           37 TAIITGATSGIGAETARVLAKRGA-------RLVLPARSL--KAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQ  107 (336)
Q Consensus        37 ~~lItGgs~gIG~aia~~L~~~G~-------~V~~~~r~~--~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~  107 (336)
                      .+.|+||+|.+|.+++..|++.+.       .+++.+.+.  ..++....++..... .....+..-- +.   ...   
T Consensus         5 KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~-~~---~~~---   76 (154)
T d5mdha1           5 RVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCAL-PLLKDVIATD-KE---EIA---   76 (154)
T ss_dssp             EEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCC-TTEEEEEEES-CH---HHH---
T ss_pred             EEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCccchhhhhhhhhhhccccc-ccccccccCc-cc---ccc---
Confidence            688999999999999999987652       466666544  334444333333221 1222222111 11   111   


Q ss_pred             HHhcCCCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCC
Q 019722          108 FHSLNLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSS  177 (336)
Q Consensus       108 ~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~  177 (336)
                          +...|++|..+|....+. .+.+   +.+..|    ...++...+.+.+...   ..+.++.+|.+
T Consensus        77 ----~~~~dvVVitag~~~~~g-~sr~---dll~~N----~~i~k~~~~~i~k~a~---~~~~iivvsNP  131 (154)
T d5mdha1          77 ----FKDLDVAILVGSMPRRDG-MERK---DLLKAN----VKIFKCQGAALDKYAK---KSVKVIVVGNP  131 (154)
T ss_dssp             ----TTTCSEEEECCSCCCCTT-CCTT---TTHHHH----HHHHHHHHHHHHHHSC---TTCEEEECSSS
T ss_pred             ----cCCceEEEEecccCCCCC-Cchh---HHHHHh----HHHHHHHHHHHHhhCC---CceEEEEecCc
Confidence                236899999999765432 2222   233333    3566777777766421   12455566654

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=95.64  E-value=0.015  Score=44.80  Aligned_cols=83  Identities=20%  Similarity=0.237  Sum_probs=51.2

Q ss_pred             EEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhC-------CCCceEEEeccCCCHHHHHHHH---HH
Q 019722           38 AIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDC-------PGSDIVVLPLDLSSLSSVRNFV---SQ  107 (336)
Q Consensus        38 ~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~-------~~~~~~~~~~Dl~~~~~v~~~~---~~  107 (336)
                      +-|.| .|-+|..+|+.|+++|++|++.+|++++.+++.+.-....       ...++.++  -+.++..++.++   +.
T Consensus         3 IgiIG-lG~MG~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~e~~~~~d~ii~--~v~~~~~v~~v~~~~~~   79 (161)
T d1vpda2           3 VGFIG-LGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAGAETASTAKAIAEQCDVIIT--MLPNSPHVKEVALGENG   79 (161)
T ss_dssp             EEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECSSHHHHHHHCSEEEE--CCSSHHHHHHHHHSTTC
T ss_pred             EEEEe-hhHHHHHHHHHHHHCCCeEEEEeCCcchhHHHHHhhhhhcccHHHHHhCCCeEEE--EcCCHHHHHHHHhCCcc
Confidence            34454 7999999999999999999999999988776554211000       01233333  356677777765   22


Q ss_pred             HHhcCCCccEEEEccc
Q 019722          108 FHSLNLPLNLLINNAG  123 (336)
Q Consensus       108 ~~~~~~~id~lv~nAg  123 (336)
                      +.....+=+++|.+..
T Consensus        80 ~~~~~~~g~iiid~sT   95 (161)
T d1vpda2          80 IIEGAKPGTVLIDMSS   95 (161)
T ss_dssp             HHHHCCTTCEEEECSC
T ss_pred             hhhccCCCCEEEECCC
Confidence            3333333345555443

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=95.60  E-value=0.0084  Score=47.55  Aligned_cols=68  Identities=16%  Similarity=0.156  Sum_probs=46.4

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHH
Q 019722           36 VTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQF  108 (336)
Q Consensus        36 k~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~  108 (336)
                      |++.|.|+ |-+|..+|..++..|++|++.+++++.+++..+.+......    .+.-....+.........+
T Consensus         5 ~~vaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~~~~~i~~~l~~----~~~~~~~~~~~~~~~~~~i   72 (186)
T d1wdka3           5 KQAAVLGA-GIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEAAKLLVG----RVDKGRMTPAKMAEVLNGI   72 (186)
T ss_dssp             SSEEEECC-HHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHHHHHHH----HHTTTSSCHHHHHHHHHHE
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCeEEEEECCHHHHhhhhhhhhhhHHh----hhcccccchhhhhhhhcee
Confidence            45777886 88999999999999999999999998877766655432100    0111233455666666554

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.54  E-value=0.017  Score=44.51  Aligned_cols=42  Identities=21%  Similarity=0.308  Sum_probs=37.5

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHH
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAE   73 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~   73 (336)
                      ..|.||+++|.| .|-||+.+|+.|...|++|+++..++-++-
T Consensus        20 ~~l~Gk~v~V~G-yG~iG~g~A~~~rg~G~~V~v~e~dp~~al   61 (163)
T d1li4a1          20 VMIAGKVAVVAG-YGDVGKGCAQALRGFGARVIITEIDPINAL   61 (163)
T ss_dssp             CCCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHH
T ss_pred             ceecCCEEEEec-cccccHHHHHHHHhCCCeeEeeecccchhH
Confidence            358999999998 779999999999999999999999986543

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.44  E-value=0.0042  Score=47.49  Aligned_cols=38  Identities=18%  Similarity=0.321  Sum_probs=33.7

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCC
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARS   68 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~   68 (336)
                      ...++||++||+|| |.+|..-++.|++.|++|++++..
T Consensus         8 ~~~l~gkrvLViGg-G~va~~ka~~Ll~~GA~VtVvap~   45 (150)
T d1kyqa1           8 AHQLKDKRILLIGG-GEVGLTRLYKLMPTGCKLTLVSPD   45 (150)
T ss_dssp             EECCTTCEEEEEEE-SHHHHHHHHHHGGGTCEEEEEEEE
T ss_pred             heeeCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCC
Confidence            34799999999998 669999999999999999999744

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=95.19  E-value=0.03  Score=45.71  Aligned_cols=48  Identities=21%  Similarity=0.319  Sum_probs=42.3

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKAR   78 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~   78 (336)
                      ..+|+||+++|-| .|.+|..+++.|.+.|++|++.+.+..........
T Consensus        34 ~~~l~g~~v~IqG-~GnVG~~~a~~L~~~Gakvv~~d~~~~~~~~~~~~   81 (230)
T d1leha1          34 SDSLEGLAVSVQG-LGNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAE   81 (230)
T ss_dssp             SCCCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHH
T ss_pred             CCCCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEeecccHHHHHHHHHh
Confidence            5679999999998 88999999999999999999999998877665544

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=95.10  E-value=0.17  Score=38.53  Aligned_cols=85  Identities=14%  Similarity=0.147  Sum_probs=54.9

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHCCC--EEEEeeCChHHHHHHHHHHHh----------hCCCCceEEEeccCCCHHHHHH
Q 019722           36 VTAIITGATSGIGAETARVLAKRGA--RLVLPARSLKAAEEAKARLAS----------DCPGSDIVVLPLDLSSLSSVRN  103 (336)
Q Consensus        36 k~~lItGgs~gIG~aia~~L~~~G~--~V~~~~r~~~~~~~~~~~l~~----------~~~~~~~~~~~~Dl~~~~~v~~  103 (336)
                      |.++|.| .|-+|.++|+.|.+.|+  +|+.++++++..+.+.+.-..          ......+.++.   .-+..+..
T Consensus         2 k~I~IIG-~G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~dlIila---~p~~~~~~   77 (171)
T d2g5ca2           2 QNVLIVG-VGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVMLS---SPVRTFRE   77 (171)
T ss_dssp             CEEEEES-CSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCGGGGGGTCCSEEEEC---SCHHHHHH
T ss_pred             CEEEEEc-cCHHHHHHHHHHHhcCCCeEEEEEECChHHHHHHHHhhcchhhhhhhhhhhcccccccccc---CCchhhhh
Confidence            4577886 69999999999999996  788899998877655442110          00012233332   23677888


Q ss_pred             HHHHHHhcCCCccEEEEcccC
Q 019722          104 FVSQFHSLNLPLNLLINNAGK  124 (336)
Q Consensus       104 ~~~~~~~~~~~id~lv~nAg~  124 (336)
                      +++++......=.+++..++.
T Consensus        78 vl~~l~~~~~~~~ii~d~~s~   98 (171)
T d2g5ca2          78 IAKKLSYILSEDATVTDQGSV   98 (171)
T ss_dssp             HHHHHHHHSCTTCEEEECCSC
T ss_pred             hhhhhhccccccccccccccc
Confidence            888887765444455555543

>d2esra1 c.66.1.46 (A:28-179) Putative methyltransferase SPy1538 {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Putative methyltransferase SPy1538
species: Streptococcus pyogenes [TaxId: 1314]

Probab=95.03  E-value=0.15  Score=38.42  Aligned_cols=79  Identities=14%  Similarity=0.154  Sum_probs=56.9

Q ss_pred             CCCCCEEEEeCCC-ChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           32 NLSSVTAIITGAT-SGIGAETARVLAKRGA-RLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        32 ~l~gk~~lItGgs-~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      +++|+.+|=.|++ |.+|.    +++.+|+ +|+.+..+++..+.+.+.++......++.+++.|..+      +++   
T Consensus        12 ~~~g~~vlDl~~GtG~~~i----ea~~rga~~v~~ve~~~~a~~~~~~n~~~~~~~~~~~ii~~D~~~------~l~---   78 (152)
T d2esra1          12 YFNGGRVLDLFAGSGGLAI----EAVSRGMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAER------AID---   78 (152)
T ss_dssp             CCCSCEEEEETCTTCHHHH----HHHHTTCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHH------HHH---
T ss_pred             hCCCCeEEEcCCccCHHHH----HHHHhCcceeeeehhchhhhhhhhhhhhhcccccchhhhcccccc------ccc---
Confidence            4789999866555 44555    4567887 8999999999888888877766545679999988532      222   


Q ss_pred             hcCCCccEEEEccc
Q 019722          110 SLNLPLNLLINNAG  123 (336)
Q Consensus       110 ~~~~~id~lv~nAg  123 (336)
                      ....+.|+++.++.
T Consensus        79 ~~~~~fDiIf~DPP   92 (152)
T d2esra1          79 CLTGRFDLVFLDPP   92 (152)
T ss_dssp             HBCSCEEEEEECCS
T ss_pred             ccccccceeEechh
Confidence            22457899988764

>d1nv8a_ c.66.1.30 (A:) N5-glutamine methyltransferase, HemK {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: N5-glutamine methyltransferase, HemK
domain: N5-glutamine methyltransferase, HemK
species: Thermotoga maritima [TaxId: 2336]

Probab=94.91  E-value=0.11  Score=43.36  Aligned_cols=81  Identities=20%  Similarity=0.156  Sum_probs=57.0

Q ss_pred             CEEEEeCCCCh-HHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCCC
Q 019722           36 VTAIITGATSG-IGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLP  114 (336)
Q Consensus        36 k~~lItGgs~g-IG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  114 (336)
                      ++++-.|+++| |+.+++ +  ...++|+.++.++..++-+.++.+...-..++.+...|+.+.         ....+++
T Consensus       112 ~~vld~g~GsG~i~~~la-~--~~~~~v~a~Dis~~Al~~A~~Na~~~~~~~~~~i~~~~~~~~---------~~~~~~~  179 (271)
T d1nv8a_         112 KTVADIGTGSGAIGVSVA-K--FSDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEP---------FKEKFAS  179 (271)
T ss_dssp             CEEEEESCTTSHHHHHHH-H--HSSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGG---------GGGGTTT
T ss_pred             cEEEEeeeeeehhhhhhh-h--cccceeeechhhhhHHHHHHHHHHHcCCCceeEEeecccccc---------cccccCc
Confidence            45665555555 555543 3  356799999999999988888877654455788888888643         2233578


Q ss_pred             ccEEEEcccCCCCC
Q 019722          115 LNLLINNAGKFAHQ  128 (336)
Q Consensus       115 id~lv~nAg~~~~~  128 (336)
                      +|++|.|..+....
T Consensus       180 fDlIVsNPPYI~~~  193 (271)
T d1nv8a_         180 IEMILSNPPYVKSS  193 (271)
T ss_dssp             CCEEEECCCCBCGG
T ss_pred             ccEEEEcccccCcc
Confidence            99999999977543

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=94.91  E-value=0.19  Score=38.55  Aligned_cols=82  Identities=18%  Similarity=0.251  Sum_probs=59.7

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      .+....-.++|.| .|-.|++.++.....|++|.+++.+.++++++.....     .++.+.   .++.+.+.+.++   
T Consensus        27 ~~gv~pa~V~ViG-aGvaG~~A~~~A~~lGA~V~~~D~~~~~l~~l~~~~~-----~~~~~~---~~~~~~l~~~~~---   94 (168)
T d1pjca1          27 VPGVKPGKVVILG-GGVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFG-----SRVELL---YSNSAEIETAVA---   94 (168)
T ss_dssp             BTTBCCCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG-----GGSEEE---ECCHHHHHHHHH---
T ss_pred             CCCCCCcEEEEEC-CChHHHHHHHHHhhCCCEEEEEeCcHHHHHHHHHhhc-----ccceee---hhhhhhHHHhhc---
Confidence            3445567888988 5788999999999999999999999998876655442     234443   445566655544   


Q ss_pred             hcCCCccEEEEcccCCCC
Q 019722          110 SLNLPLNLLINNAGKFAH  127 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~~  127 (336)
                          .-|++|..+=+...
T Consensus        95 ----~aDivI~aalipG~  108 (168)
T d1pjca1          95 ----EADLLIGAVLVPGR  108 (168)
T ss_dssp             ----TCSEEEECCCCTTS
T ss_pred             ----cCcEEEEeeecCCc
Confidence                56999999876544

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=94.79  E-value=0.14  Score=39.61  Aligned_cols=36  Identities=22%  Similarity=0.285  Sum_probs=32.9

Q ss_pred             CCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHH
Q 019722           43 ATSGIGAETARVLAKRGARLVLPARSLKAAEEAKAR   78 (336)
Q Consensus        43 gs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~   78 (336)
                      |.|-+|.++++.|++.|++|++.+|++++.+++.++
T Consensus         8 GlG~MG~~ma~~L~~~G~~V~~~dr~~~~~~~l~~~   43 (178)
T d1pgja2           8 GLGVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKA   43 (178)
T ss_dssp             CCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHH
T ss_pred             eehHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHc
Confidence            589999999999999999999999999988877665

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=94.78  E-value=0.092  Score=40.09  Aligned_cols=86  Identities=19%  Similarity=0.070  Sum_probs=51.2

Q ss_pred             EEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCC-----CCceEEEeccCCCHHHHHHHHHH---H
Q 019722           37 TAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCP-----GSDIVVLPLDLSSLSSVRNFVSQ---F  108 (336)
Q Consensus        37 ~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-----~~~~~~~~~Dl~~~~~v~~~~~~---~  108 (336)
                      .+-|. |.|-+|.++|+.|+++|++|.+.+|++++.+.+...-.....     -....++..-+.+...++.++..   +
T Consensus         3 kIg~I-GlG~MG~~iA~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~~e~~~~~diii~~v~~~~~~~~v~~~~~~~   81 (162)
T d3cuma2           3 QIAFI-GLGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAARSARDAVQGADVVISMLPASQHVEGLYLDDDGL   81 (162)
T ss_dssp             EEEEE-CCSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECSSHHHHHTSCSEEEECCSCHHHHHHHHHSTTCH
T ss_pred             EEEEE-EEHHHHHHHHHHHHHCCCeEEEEECchhhhhhhhhhhccccchhhhhccccCeeeecccchhhHHHHHhccccc
Confidence            35555 479999999999999999999999998877654432111000     01122333345666777766543   2


Q ss_pred             HhcCCCccEEEEccc
Q 019722          109 HSLNLPLNLLINNAG  123 (336)
Q Consensus       109 ~~~~~~id~lv~nAg  123 (336)
                      .....+=+++|.+..
T Consensus        82 ~~~l~~g~iiid~st   96 (162)
T d3cuma2          82 LAHIAPGTLVLECST   96 (162)
T ss_dssp             HHHSCTTCEEEECSC
T ss_pred             cccCCCCCEEEECCC
Confidence            222222245554444

>d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein Ta1320
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=94.65  E-value=0.14  Score=40.60  Aligned_cols=72  Identities=22%  Similarity=0.145  Sum_probs=53.7

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGA-RLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      .++.||+||=.|+++|+   ++..++..|+ +|+.++.++..++.+.+.      -.++.++.+|+.+.           
T Consensus        45 ~dl~Gk~VLDlGcGtG~---l~i~a~~~ga~~V~~vDid~~a~~~ar~N------~~~~~~~~~D~~~l-----------  104 (197)
T d1ne2a_          45 GNIGGRSVIDAGTGNGI---LACGSYLLGAESVTAFDIDPDAIETAKRN------CGGVNFMVADVSEI-----------  104 (197)
T ss_dssp             TSSBTSEEEEETCTTCH---HHHHHHHTTBSEEEEEESCHHHHHHHHHH------CTTSEEEECCGGGC-----------
T ss_pred             CCCCCCEEEEeCCCCcH---HHHHHHHcCCCcccccccCHHHHHHHHHc------cccccEEEEehhhc-----------
Confidence            46899999999988873   3345777886 799999998876654443      24678899998532           


Q ss_pred             hcCCCccEEEEcccC
Q 019722          110 SLNLPLNLLINNAGK  124 (336)
Q Consensus       110 ~~~~~id~lv~nAg~  124 (336)
                        .+++|++|.|..+
T Consensus       105 --~~~fD~Vi~NPPf  117 (197)
T d1ne2a_         105 --SGKYDTWIMNPPF  117 (197)
T ss_dssp             --CCCEEEEEECCCC
T ss_pred             --CCcceEEEeCccc
Confidence              3579999999765

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=94.61  E-value=0.018  Score=42.44  Aligned_cols=70  Identities=19%  Similarity=0.112  Sum_probs=50.9

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCCCc
Q 019722           36 VTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLPL  115 (336)
Q Consensus        36 k~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i  115 (336)
                      |.++|.| .+.+|..+++.|.  |.+|+++..+++..+...        ...+.++.+|.++++.++++-      ..+.
T Consensus         1 kHivI~G-~g~~g~~l~~~L~--~~~i~vi~~d~~~~~~~~--------~~~~~~i~Gd~~~~~~L~~a~------i~~A   63 (129)
T d2fy8a1           1 RHVVICG-WSESTLECLRELR--GSEVFVLAEDENVRKKVL--------RSGANFVHGDPTRVSDLEKAN------VRGA   63 (129)
T ss_dssp             CCEEEES-CCHHHHHHHHTSC--GGGEEEEESCTTHHHHHH--------HTTCEEEESCTTSHHHHHHTT------CTTC
T ss_pred             CEEEEEC-CCHHHHHHHHHHc--CCCCEEEEcchHHHHHHH--------hcCccccccccCCHHHHHHhh------hhcC
Confidence            4677887 5889999999994  567888888888765443        136788999999987776632      3356


Q ss_pred             cEEEEcc
Q 019722          116 NLLINNA  122 (336)
Q Consensus       116 d~lv~nA  122 (336)
                      +.+|...
T Consensus        64 ~~vi~~~   70 (129)
T d2fy8a1          64 RAVIVNL   70 (129)
T ss_dssp             SEEEECC
T ss_pred             cEEEEec
Confidence            7777544

>d2as0a2 c.66.1.51 (A:73-396) Hypothetical protein PH1915, middle and C-terminal domains {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein PH1915, middle and C-terminal domains
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=94.45  E-value=0.14  Score=43.91  Aligned_cols=119  Identities=14%  Similarity=0.128  Sum_probs=74.4

Q ss_pred             CCCEEEEeCCC-ChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhc
Q 019722           34 SSVTAIITGAT-SGIGAETARVLAKRGA-RLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSL  111 (336)
Q Consensus        34 ~gk~~lItGgs-~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  111 (336)
                      .|++||=.|+. |+++.+    ++..|+ +|+.++.++..++.+.++++......++.++..|+.      ...+.+...
T Consensus       145 ~g~~VLDl~~g~G~~si~----~a~~ga~~V~~vD~s~~al~~a~~N~~~ngl~~~~~~~~~d~~------~~~~~~~~~  214 (324)
T d2as0a2         145 PGDRVLDVFTYTGGFAIH----AAIAGADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAF------EEMEKLQKK  214 (324)
T ss_dssp             TTCEEEETTCTTTHHHHH----HHHTTCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHH------HHHHHHHHT
T ss_pred             CCCeeecccCcccchhhh----hhhcCCcEEEeecCCHHHHHHHHHHHHHcCCCccceeeechhh------hhhHHHHhc
Confidence            47888866654 555544    345676 899999999998888888776544457888888763      223333334


Q ss_pred             CCCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCC
Q 019722          112 NLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSS  177 (336)
Q Consensus       112 ~~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~  177 (336)
                      ..+.|++|.++......    ..+....    ......+++.+++.++.       +|.+|..|++
T Consensus       215 ~~~fD~Vi~DpP~~~~~----~~~~~~~----~~~y~~l~~~a~~ll~p-------GG~lv~~s~s  265 (324)
T d2as0a2         215 GEKFDIVVLDPPAFVQH----EKDLKAG----LRAYFNVNFAGLNLVKD-------GGILVTCSCS  265 (324)
T ss_dssp             TCCEEEEEECCCCSCSS----GGGHHHH----HHHHHHHHHHHHTTEEE-------EEEEEEEECC
T ss_pred             cCCCCchhcCCccccCC----HHHHHHH----HHHHHHHHHHHHHHcCC-------CcEEEEEeCC
Confidence            45799999998754432    2222222    22344466666666543       3666665543

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=94.42  E-value=0.03  Score=43.17  Aligned_cols=43  Identities=19%  Similarity=0.203  Sum_probs=37.5

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAA   72 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~   72 (336)
                      ..++.||+++|.|-+.-+|+-++..|.++|++|.++......+
T Consensus        32 ~i~l~GK~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~t~~l   74 (166)
T d1b0aa1          32 NIDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKNL   74 (166)
T ss_dssp             TCCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCSCH
T ss_pred             CcccccceEEEEeccccccHHHHHHHHHhhccccccccccchh
Confidence            4579999999999999999999999999999999887654433

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=94.14  E-value=0.05  Score=43.15  Aligned_cols=40  Identities=18%  Similarity=0.150  Sum_probs=36.2

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLK   70 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~   70 (336)
                      ..++.||++.|.| .|.||+++++.|...|++|+..++...
T Consensus        44 ~~eL~gktvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~~   83 (193)
T d1mx3a1          44 AARIRGETLGIIG-LGRVGQAVALRAKAFGFNVLFYDPYLS   83 (193)
T ss_dssp             CCCCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECTTSC
T ss_pred             ceeeeCceEEEec-cccccccceeeeeccccceeeccCccc
Confidence            6779999999997 899999999999999999999987644

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.13  E-value=0.029  Score=43.52  Aligned_cols=44  Identities=14%  Similarity=0.142  Sum_probs=38.6

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAE   73 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~   73 (336)
                      ..+++||.++|.|-|.-+|+-++..|+++|+.|.++......+.
T Consensus        34 ~i~l~Gk~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~t~~l~   77 (170)
T d1a4ia1          34 GVPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTAHLD   77 (170)
T ss_dssp             TCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSHH
T ss_pred             CcccccceEEEEecCCccchHHHHHHHhccCceEEEecccccHH
Confidence            45799999999999999999999999999999999887654443

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=94.08  E-value=0.019  Score=45.91  Aligned_cols=40  Identities=15%  Similarity=0.164  Sum_probs=35.9

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLK   70 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~   70 (336)
                      ..++.||++.|.| .|.||+.+++.|..-|++|+..++...
T Consensus        38 g~el~gk~vgIiG-~G~IG~~va~~l~~fg~~V~~~d~~~~   77 (197)
T d1j4aa1          38 GREVRDQVVGVVG-TGHIGQVFMQIMEGFGAKVITYDIFRN   77 (197)
T ss_dssp             BCCGGGSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             CccccCCeEEEec-ccccchhHHHhHhhhcccccccCcccc
Confidence            4578999999998 899999999999999999999987654

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=93.97  E-value=0.16  Score=36.16  Aligned_cols=71  Identities=13%  Similarity=0.166  Sum_probs=54.3

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCC
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNL  113 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  113 (336)
                      .+.++.|.| +|-+|+-++....+.|+++++.+.+++.-..          ..--.++..|..|.+.+..++++.     
T Consensus        10 ~~~kigIlG-gGQL~rMla~aA~~lG~~v~v~d~~~~~PA~----------~va~~~i~~~~~d~~~l~~~~~~~-----   73 (111)
T d1kjqa2          10 AATRVMLLG-SGELGKEVAIECQRLGVEVIAVDRYADAPAM----------HVAHRSHVINMLDGDALRRVVELE-----   73 (111)
T ss_dssp             TCCEEEEES-CSHHHHHHHHHHHTTTCEEEEEESSTTCGGG----------GGSSEEEECCTTCHHHHHHHHHHH-----
T ss_pred             CCCEEEEEe-CCHHHHHHHHHHHHCCCEEEEEcCCCCCchh----------hcCCeEEECCCCCHHHHHHHHHhh-----
Confidence            445799998 7899999999999999999999987652110          112356778999999999988754     


Q ss_pred             CccEEEE
Q 019722          114 PLNLLIN  120 (336)
Q Consensus       114 ~id~lv~  120 (336)
                      .+|++..
T Consensus        74 ~~DviT~   80 (111)
T d1kjqa2          74 KPHYIVP   80 (111)
T ss_dssp             CCSEEEE
T ss_pred             CCceEEE
Confidence            5788753

>d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein TTHA1280, middle and C-terminal domains
species: Thermus thermophilus [TaxId: 274]

Probab=93.91  E-value=0.73  Score=39.02  Aligned_cols=83  Identities=16%  Similarity=0.141  Sum_probs=56.6

Q ss_pred             CCCCEEEEeCCC-ChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhc
Q 019722           33 LSSVTAIITGAT-SGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSL  111 (336)
Q Consensus        33 l~gk~~lItGgs-~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  111 (336)
                      .+|++||=.++. |+++.+    ++..+.+|+.++.++..++.+.+.++...- .++.++.+|..+      +.+.+...
T Consensus       144 ~~g~rVLDl~~gtG~~s~~----~a~g~~~V~~vD~s~~al~~a~~n~~~ngl-~~~~~i~~d~~~------~~~~~~~~  212 (318)
T d1wxxa2         144 FRGERALDVFSYAGGFALH----LALGFREVVAVDSSAEALRRAEENARLNGL-GNVRVLEANAFD------LLRRLEKE  212 (318)
T ss_dssp             CCEEEEEEETCTTTHHHHH----HHHHEEEEEEEESCHHHHHHHHHHHHHTTC-TTEEEEESCHHH------HHHHHHHT
T ss_pred             hCCCeeeccCCCCcHHHHH----HHhcCCcEEeecchHHHHHHHHHHHHHcCC-CCcceeeccHHH------HhhhhHhh
Confidence            578899866654 555443    344566999999999998888877766532 468888888742      22233333


Q ss_pred             CCCccEEEEcccCCC
Q 019722          112 NLPLNLLINNAGKFA  126 (336)
Q Consensus       112 ~~~id~lv~nAg~~~  126 (336)
                      ....|++|.++..+.
T Consensus       213 ~~~fD~Vi~DpP~~~  227 (318)
T d1wxxa2         213 GERFDLVVLDPPAFA  227 (318)
T ss_dssp             TCCEEEEEECCCCSC
T ss_pred             hcCCCEEEEcCCccc
Confidence            457999999986543

>d2fhpa1 c.66.1.46 (A:1-182) Putative methylase EF2452 {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Putative methylase EF2452
species: Enterococcus faecalis [TaxId: 1351]

Probab=93.74  E-value=0.21  Score=38.91  Aligned_cols=82  Identities=17%  Similarity=0.258  Sum_probs=59.2

Q ss_pred             CCCCCEEE-EeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           32 NLSSVTAI-ITGATSGIGAETARVLAKRGA-RLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        32 ~l~gk~~l-ItGgs~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      .+.|+.+| +-.|+|.+|.+    .+.+|+ +|+.+..+....+.+.+.++......++.++..|+.      ++++++.
T Consensus        39 ~~~~~~vLDlfaGsG~~g~e----a~srGa~~v~~ve~~~~a~~~~~~N~~~~~~~~~~~i~~~D~~------~~l~~~~  108 (182)
T d2fhpa1          39 YFDGGMALDLYSGSGGLAIE----AVSRGMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDAN------RALEQFY  108 (182)
T ss_dssp             CCSSCEEEETTCTTCHHHHH----HHHTTCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHH------HHHHHHH
T ss_pred             hcCCCEEEEcccccccccce----eeecchhHHHHHHHHHHHHHHHHHHhhhhhcccccccccccch------hhhhhhc
Confidence            46788887 44556777775    567898 799999999988888777776544558899998873      3444444


Q ss_pred             hcCCCccEEEEccc
Q 019722          110 SLNLPLNLLINNAG  123 (336)
Q Consensus       110 ~~~~~id~lv~nAg  123 (336)
                      +...+.|+++....
T Consensus       109 ~~~~~fDlIflDPP  122 (182)
T d2fhpa1         109 EEKLQFDLVLLDPP  122 (182)
T ss_dssp             HTTCCEEEEEECCC
T ss_pred             ccCCCcceEEechh
Confidence            44457899987764

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=93.57  E-value=0.057  Score=40.92  Aligned_cols=40  Identities=18%  Similarity=0.263  Sum_probs=33.8

Q ss_pred             EEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHH
Q 019722           39 IITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARL   79 (336)
Q Consensus        39 lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l   79 (336)
                      .|. |+|-+|.++++.|.+.|++|++..|+.++.+++.++.
T Consensus         4 g~I-G~G~mG~al~~~l~~~~~~i~v~~r~~~~~~~l~~~~   43 (152)
T d2ahra2           4 GII-GVGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQL   43 (152)
T ss_dssp             EEE-CCSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHH
T ss_pred             EEE-eccHHHHHHHHHHHhCCCeEEEEcChHHhHHhhcccc
Confidence            344 5899999999999999999999999998877766554

>d2b78a2 c.66.1.51 (A:69-385) Hypothetical protein SMu776, middle and C-terminal domains {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein SMu776, middle and C-terminal domains
species: Streptococcus mutans [TaxId: 1309]

Probab=93.57  E-value=1.7  Score=36.64  Aligned_cols=83  Identities=13%  Similarity=0.148  Sum_probs=56.9

Q ss_pred             CCCEEEEeCC-CChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhhCC-CCceEEEeccCCCHHHHHHHHHHHHh
Q 019722           34 SSVTAIITGA-TSGIGAETARVLAKRGA-RLVLPARSLKAAEEAKARLASDCP-GSDIVVLPLDLSSLSSVRNFVSQFHS  110 (336)
Q Consensus        34 ~gk~~lItGg-s~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~  110 (336)
                      .|+++|=..+ +|+++.+    ++..|+ .|+.++.++..++.+.++++.... ..++.+++.|+.      .+++...+
T Consensus       144 ~g~~VLdlf~~~G~~sl~----aa~~ga~~V~~vD~s~~a~~~a~~N~~~n~l~~~~~~~i~~d~~------~~l~~~~~  213 (317)
T d2b78a2         144 AGKTVLNLFSYTAAFSVA----AAMGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVF------DYFKYARR  213 (317)
T ss_dssp             BTCEEEEETCTTTHHHHH----HHHTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHH------HHHHHHHH
T ss_pred             CCCceeecCCCCcHHHHH----HHhCCCceEEEecCCHHHHHHHHHHHHHhcccCcceEEEEccHH------HHHHHHHh
Confidence            5888885544 5665543    455787 799999999988888887765432 357899998873      33344444


Q ss_pred             cCCCccEEEEcccCCC
Q 019722          111 LNLPLNLLINNAGKFA  126 (336)
Q Consensus       111 ~~~~id~lv~nAg~~~  126 (336)
                      ...+.|++|.++..+.
T Consensus       214 ~~~~fD~Ii~DPP~f~  229 (317)
T d2b78a2         214 HHLTYDIIIIDPPSFA  229 (317)
T ss_dssp             TTCCEEEEEECCCCC-
T ss_pred             hcCCCCEEEEcChhhc
Confidence            4457999999976544

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=93.37  E-value=0.041  Score=41.91  Aligned_cols=34  Identities=18%  Similarity=0.182  Sum_probs=30.2

Q ss_pred             EEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHH
Q 019722           37 TAIITGATSGIGAETARVLAKRGARLVLPARSLKA   71 (336)
Q Consensus        37 ~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~   71 (336)
                      .+.|.|+ |.+|..++..|++.|++|.+++|+++.
T Consensus         2 kI~IiGa-G~iG~~~a~~L~~~G~~V~~~~r~~~~   35 (167)
T d1ks9a2           2 KITVLGC-GALGQLWLTALCKQGHEVQGWLRVPQP   35 (167)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCS
T ss_pred             EEEEECc-CHHHHHHHHHHHHCCCceEEEEcCHHH
Confidence            4677786 999999999999999999999998753

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=93.33  E-value=0.074  Score=41.85  Aligned_cols=39  Identities=21%  Similarity=0.174  Sum_probs=35.6

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCCh
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSL   69 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~   69 (336)
                      ..+++|+++.|.| .|.||+++++.|...|++|+..++..
T Consensus        39 ~~~l~~~~vgiiG-~G~IG~~va~~l~~fg~~v~~~d~~~   77 (188)
T d2naca1          39 AYDLEAMHVGTVA-AGRIGLAVLRRLAPFDVHLHYTDRHR   77 (188)
T ss_dssp             CCCCTTCEEEEEC-CSHHHHHHHHHHGGGTCEEEEECSSC
T ss_pred             ceeccccceeecc-ccccchhhhhhhhccCceEEEEeecc
Confidence            6689999999998 78999999999999999999999754

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=93.32  E-value=0.16  Score=36.32  Aligned_cols=34  Identities=18%  Similarity=0.273  Sum_probs=29.9

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChH
Q 019722           36 VTAIITGATSGIGAETARVLAKRGARLVLPARSLK   70 (336)
Q Consensus        36 k~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~   70 (336)
                      |.++|.| +|.+|.++|..|++.|.+|.++.|.+.
T Consensus        23 ~~v~IiG-gG~ig~E~A~~l~~~G~~Vtlve~~~~   56 (117)
T d1ebda2          23 KSLVVIG-GGYIGIELGTAYANFGTKVTILEGAGE   56 (117)
T ss_dssp             SEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CeEEEEC-CCccceeeeeeecccccEEEEEEecce
Confidence            6788887 689999999999999999999987743

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=93.25  E-value=0.067  Score=41.99  Aligned_cols=41  Identities=22%  Similarity=0.180  Sum_probs=36.5

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKA   71 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~   71 (336)
                      ..++.||++.|.| .|.||+++++.+...|++|+..++....
T Consensus        39 ~~~l~~k~vgiiG-~G~IG~~va~~~~~fg~~v~~~d~~~~~   79 (184)
T d1ygya1          39 GTEIFGKTVGVVG-LGRIGQLVAQRIAAFGAYVVAYDPYVSP   79 (184)
T ss_dssp             BCCCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECTTSCH
T ss_pred             cccccceeeeecc-ccchhHHHHHHhhhccceEEeecCCCCh
Confidence            5679999999998 7999999999999999999999987554

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=93.18  E-value=0.062  Score=41.62  Aligned_cols=39  Identities=21%  Similarity=0.210  Sum_probs=35.7

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCC
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARS   68 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~   68 (336)
                      ..+++||.++|.|-|.=+|+-++..|+++|+.|..+..+
T Consensus        24 g~~l~GK~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~   62 (171)
T d1edza1          24 GNRLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVN   62 (171)
T ss_dssp             TCTTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSS
T ss_pred             cCCCCCCEEEEECCccccHHHHHHHHHHCCCEEEEeccc
Confidence            458999999999999999999999999999999988755

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=93.17  E-value=0.078  Score=41.87  Aligned_cols=40  Identities=18%  Similarity=0.040  Sum_probs=35.6

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLK   70 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~   70 (336)
                      ..++.||++.|.| .|.||+++++.+...|++|+..++...
T Consensus        42 ~~~l~g~tvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~~   81 (191)
T d1gdha1          42 GEKLDNKTLGIYG-FGSIGQALAKRAQGFDMDIDYFDTHRA   81 (191)
T ss_dssp             BCCCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECSSCC
T ss_pred             cceecccceEEee-cccchHHHHHHHHhhcccccccccccc
Confidence            5679999999998 789999999999999999999987543

>d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 3, PRMT3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.17  E-value=0.19  Score=42.64  Aligned_cols=77  Identities=14%  Similarity=0.122  Sum_probs=56.0

Q ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHh
Q 019722           32 NLSSVTAIITGATSGIGAETARVLAKRGA-RLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHS  110 (336)
Q Consensus        32 ~l~gk~~lItGgs~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  110 (336)
                      .++||+||-.|+++|+   ++..+++.|+ +|+.++.++.. ..+.+..++.....++.++..|+.+...          
T Consensus        33 ~~~~~~VLDiGcG~G~---lsl~aa~~Ga~~V~aid~s~~~-~~a~~~~~~~~~~~~i~~~~~~~~~l~~----------   98 (311)
T d2fyta1          33 IFKDKVVLDVGCGTGI---LSMFAAKAGAKKVLGVDQSEIL-YQAMDIIRLNKLEDTITLIKGKIEEVHL----------   98 (311)
T ss_dssp             GTTTCEEEEETCTTSH---HHHHHHHTTCSEEEEEESSTHH-HHHHHHHHHTTCTTTEEEEESCTTTSCC----------
T ss_pred             cCCcCEEEEECCCCCH---HHHHHHHcCCCEEEEEeCHHHH-HHHHHHHHHhCCCccceEEEeeHHHhcC----------
Confidence            4679999999999886   5667788897 89999988753 4445555555446789999999876531          


Q ss_pred             cCCCccEEEEcc
Q 019722          111 LNLPLNLLINNA  122 (336)
Q Consensus       111 ~~~~id~lv~nA  122 (336)
                      ...+.|+++...
T Consensus        99 ~~~~~D~Ivse~  110 (311)
T d2fyta1          99 PVEKVDVIISEW  110 (311)
T ss_dssp             SCSCEEEEEECC
T ss_pred             ccccceEEEEee
Confidence            124789998753

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=93.14  E-value=0.093  Score=39.56  Aligned_cols=40  Identities=23%  Similarity=0.330  Sum_probs=33.0

Q ss_pred             EEEeCCCChHHHHHHHHHHHCC-CEEEEeeCChHHHHHHHHH
Q 019722           38 AIITGATSGIGAETARVLAKRG-ARLVLPARSLKAAEEAKAR   78 (336)
Q Consensus        38 ~lItGgs~gIG~aia~~L~~~G-~~V~~~~r~~~~~~~~~~~   78 (336)
                      +.+.| +|-+|.++++.|++.| ++|++.+|++++.+++.++
T Consensus         3 I~fIG-~G~MG~ai~~~l~~~~~~~i~v~~r~~~~~~~l~~~   43 (152)
T d1yqga2           3 VYFLG-GGNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKE   43 (152)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHH
T ss_pred             EEEEc-CcHHHHHHHHHHHHCCCCcEEEEeCChhHHHHhhhh
Confidence            44555 5999999999999988 7999999999887766554

>d1yova1 c.111.1.2 (A:6-534) Amyloid beta precursor protein-binding protein 1, APPBP1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: Amyloid beta precursor protein-binding protein 1, APPBP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.11  E-value=0.048  Score=50.28  Aligned_cols=58  Identities=19%  Similarity=0.152  Sum_probs=42.8

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCC-------------------hHHHHHHHHHHHhhCCCCceEEE
Q 019722           33 LSSVTAIITGATSGIGAETARVLAKRGA-RLVLPARS-------------------LKAAEEAKARLASDCPGSDIVVL   91 (336)
Q Consensus        33 l~gk~~lItGgs~gIG~aia~~L~~~G~-~V~~~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~~   91 (336)
                      |.+..|+|.|+ ||+|.++++.|+..|. ++.+++.+                   ..+++.+.+.+++.+|..++.++
T Consensus        23 L~~s~VlvvG~-gglG~Ei~knLvl~GVg~itivD~d~v~~sdL~rqf~~~~~diGk~ka~~~~~~L~~lNp~v~i~~~  100 (529)
T d1yova1          23 LESAHVCLINA-TATGTEILKNLVLPGIGSFTIIDGNQVSGEDAGNNFFLQRSSIGKNRAEAAMEFLQELNSDVSGSFV  100 (529)
T ss_dssp             HHHCEEEECCC-SHHHHHHHHHHHTTTCSEEEEECCSBCCHHHHHHCTTCCGGGTTSBHHHHHHHHHHTTCTTSBCCEE
T ss_pred             HhCCCEEEECC-CHHHHHHHHHHHHhcCCEEEEEcCCcCChhhcCchhcCChhhCCCHHHHHHHHHHHHhCCCCcEEEE
Confidence            55678999985 8999999999999997 88887543                   13566667777776665544444

>d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Alpha-glucosidase AglA
species: Thermotoga maritima [TaxId: 2336]

Probab=93.10  E-value=0.4  Score=36.74  Aligned_cols=119  Identities=14%  Similarity=0.130  Sum_probs=64.0

Q ss_pred             EEEeCC-CChHHHHHHHHHHHC----CCEEEEeeCChHHHHHHHHHHHh---hCCCCceEEEeccCCCHHHHHHHHHHHH
Q 019722           38 AIITGA-TSGIGAETARVLAKR----GARLVLPARSLKAAEEAKARLAS---DCPGSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        38 ~lItGg-s~gIG~aia~~L~~~----G~~V~~~~r~~~~~~~~~~~l~~---~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      +.|.|| +-|...+++..|+..    +.++++++.++++++.....++.   .. +....+...  +|.   +..++   
T Consensus         5 I~iIGaGsvg~t~~~~~~l~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~-~~~~~i~~~--td~---~eaL~---   75 (171)
T d1obba1           5 IGIIGAGSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEV-GADLKFEKT--MNL---DDVII---   75 (171)
T ss_dssp             EEEETTTCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHT-TCCCEEEEE--SCH---HHHHT---
T ss_pred             EEEECCCHHHhHHHHHHHHHhccccCCCEEEEEeCCchHHHHHHHHHHHHHHhc-CCCeEEEEe--CCh---hhccc---
Confidence            445554 334555566666643    35999999999887654443333   22 223333321  222   22222   


Q ss_pred             hcCCCccEEEEcccCCCCCCCCCchhhhhHHHH------------------------HHhHHHHHHHHHHHHHHHhhccC
Q 019722          110 SLNLPLNLLINNAGKFAHQHAISEDGIEMTFAT------------------------NYLGHFLLTKLLLKKMIETAKAT  165 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~v------------------------n~~~~~~l~~~~~~~l~~~~~~~  165 (336)
                          ..|++|+.+++....      .++....+                        ......-.++.+.+.+.+..   
T Consensus        76 ----dad~Vv~~~~~g~~~------~~~~~~~i~~~~g~~~~~~~~~~~~~g~~~~~~~~rn~~i~~~i~~~i~~~~---  142 (171)
T d1obba1          76 ----DADFVINTAMVGGHT------YLEKVRQIGEKYGYYRGIDAQEFNMVSDYYTFSNYNQLKYFVDIARKIEKLS---  142 (171)
T ss_dssp             ----TCSEEEECCCTTHHH------HHHHHHHHHHHTTCTTCTTCBTTBCCTTCCSSSCHHHHHHHHHHHHHHHHHC---
T ss_pred             ----CCCeEeeeccccccc------ceeeehhcchhhhhccCCCccccCCCCCcceeeecchHHHHHHHHHHHHHHC---
Confidence                679999998864321      11100000                        01235567778888887653   


Q ss_pred             CCCCeEEEEcCCcc
Q 019722          166 GIQGRIVNVSSSIH  179 (336)
Q Consensus       166 ~~~grIV~vsS~~~  179 (336)
                       +++-++++|.+..
T Consensus       143 -p~a~~i~~TNPvd  155 (171)
T d1obba1         143 -PKAWYLQAANPIF  155 (171)
T ss_dssp             -TTCEEEECSSCHH
T ss_pred             -cCeEEEEECChHH
Confidence             2578888887643

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=93.10  E-value=0.16  Score=36.78  Aligned_cols=33  Identities=21%  Similarity=0.261  Sum_probs=29.2

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCCh
Q 019722           36 VTAIITGATSGIGAETARVLAKRGARLVLPARSL   69 (336)
Q Consensus        36 k~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~   69 (336)
                      |.++|.| +|-||.++|..|++.|.+|.++.+++
T Consensus        24 ~~~vIiG-~G~ig~E~A~~l~~lG~~Vtii~~~~   56 (122)
T d1v59a2          24 KRLTIIG-GGIIGLEMGSVYSRLGSKVTVVEFQP   56 (122)
T ss_dssp             SEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CeEEEEC-CCchHHHHHHHHHhhCcceeEEEecc
Confidence            6777887 68999999999999999999998764

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=93.05  E-value=0.049  Score=41.30  Aligned_cols=48  Identities=25%  Similarity=0.281  Sum_probs=34.9

Q ss_pred             ccccccCCCCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCCh
Q 019722           22 TAEQVTDGCPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSL   69 (336)
Q Consensus        22 ~~~~~~~~~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~   69 (336)
                      |+++...+.-.+.+++++|-.|++.||.++|..|+++|.+|.++.+.+
T Consensus        27 t~~d~l~~~~~~~~~vvi~d~ggg~ig~e~A~~la~~G~~Vtlv~~~~   74 (156)
T d1djqa2          27 TPEQVMDGKKKIGKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH   74 (156)
T ss_dssp             CHHHHHHTCSCCCSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             CHHHHhcCccccCCceEEEecCCChHHHHHHHHHHHcCCeEEEEecCC
Confidence            344444433344444555556779999999999999999999998875

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.03  E-value=0.21  Score=36.17  Aligned_cols=33  Identities=27%  Similarity=0.328  Sum_probs=29.0

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCCh
Q 019722           36 VTAIITGATSGIGAETARVLAKRGARLVLPARSL   69 (336)
Q Consensus        36 k~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~   69 (336)
                      |.++|.| +|.||.++|..|++.|.+|.++.|++
T Consensus        23 k~vvIvG-gG~iG~E~A~~l~~~G~~Vtlv~~~~   55 (125)
T d3grsa2          23 GRSVIVG-AGYIAVEMAGILSALGSKTSLMIRHD   55 (125)
T ss_dssp             SEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CEEEEEc-CCccHHHHHHHHhcCCcEEEEEeecc
Confidence            6788888 46799999999999999999999863

>d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 1, PRMT1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=92.73  E-value=0.43  Score=40.35  Aligned_cols=77  Identities=13%  Similarity=0.124  Sum_probs=54.2

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhc
Q 019722           33 LSSVTAIITGATSGIGAETARVLAKRGA-RLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSL  111 (336)
Q Consensus        33 l~gk~~lItGgs~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  111 (336)
                      ++||+||-.|++.|+   ++..++++|+ +|+.++.++. .....+.+++.....++.++..|+.+...          .
T Consensus        32 ~~~~~VLDiGcG~G~---ls~~aa~~Ga~~V~avd~s~~-~~~a~~~~~~n~~~~~v~~~~~~~~~~~~----------~   97 (316)
T d1oria_          32 FKDKVVLDVGSGTGI---LCMFAAKAGARKVIGIECSSI-SDYAVKIVKANKLDHVVTIIKGKVEEVEL----------P   97 (316)
T ss_dssp             HTTCEEEEETCTTSH---HHHHHHHTTCSEEEEEECSTT-HHHHHHHHHHTTCTTTEEEEESCTTTCCC----------S
T ss_pred             CCcCEEEEEecCCcH---HHHHHHHhCCCEEEEEcCcHH-HhhhhhHHHHhCCccccceEeccHHHccc----------c
Confidence            478999999998885   4566788886 7999998764 44444444444445679999999876431          1


Q ss_pred             CCCccEEEEccc
Q 019722          112 NLPLNLLINNAG  123 (336)
Q Consensus       112 ~~~id~lv~nAg  123 (336)
                      ..++|+++....
T Consensus        98 ~~~~D~ivs~~~  109 (316)
T d1oria_          98 VEKVDIIISEWM  109 (316)
T ss_dssp             SSCEEEEEECCC
T ss_pred             cceeEEEeeeee
Confidence            247899987643

>d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Putative methyltransferase CAC2371
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=92.72  E-value=0.2  Score=40.63  Aligned_cols=77  Identities=18%  Similarity=0.118  Sum_probs=58.4

Q ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhc
Q 019722           32 NLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSL  111 (336)
Q Consensus        32 ~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  111 (336)
                      ...++++|=.|++.|.   ++..|+++|.+|+.++.++.-++.+.+.....  +.++.++.+|+.+..           .
T Consensus        35 ~~~~~~vLDiGCG~G~---~~~~l~~~g~~v~GvD~S~~ml~~A~~~~~~~--~~~v~~~~~d~~~~~-----------~   98 (246)
T d1y8ca_          35 NLVFDDYLDLACGTGN---LTENLCPKFKNTWAVDLSQEMLSEAENKFRSQ--GLKPRLACQDISNLN-----------I   98 (246)
T ss_dssp             TCCTTEEEEETCTTST---THHHHGGGSSEEEEECSCHHHHHHHHHHHHHT--TCCCEEECCCGGGCC-----------C
T ss_pred             CCCCCeEEEEeCcCCH---HHHHHHHhCCccEeeccchhhhhhcccccccc--Cccceeeccchhhhc-----------c
Confidence            3567889999998885   77889999999999999998877766655544  457899999886532           1


Q ss_pred             CCCccEEEEcccC
Q 019722          112 NLPLNLLINNAGK  124 (336)
Q Consensus       112 ~~~id~lv~nAg~  124 (336)
                      .+..|++++..+.
T Consensus        99 ~~~fD~i~~~~~~  111 (246)
T d1y8ca_          99 NRKFDLITCCLDS  111 (246)
T ss_dssp             SCCEEEEEECTTG
T ss_pred             cccccccceeeee
Confidence            3478999876543

>d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Precorrin-6Y methyltransferase (CbiT)
domain: Precorrin-6Y methyltransferase (CbiT)
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=92.68  E-value=0.49  Score=36.56  Aligned_cols=77  Identities=16%  Similarity=0.170  Sum_probs=55.7

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCC
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNL  113 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  113 (336)
                      .|.++|=.|+++|   .++..|++.+.+|+.++.++..++.+.+++++..-..++.++++|..          ++.....
T Consensus        33 ~g~~VLDiGcGsG---~~s~~lA~~~~~V~avD~~~~~l~~a~~n~~~~gl~~~v~~~~gda~----------~~~~~~~   99 (186)
T d1l3ia_          33 KNDVAVDVGCGTG---GVTLELAGRVRRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAP----------EALCKIP   99 (186)
T ss_dssp             TTCEEEEESCTTS---HHHHHHHTTSSEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHH----------HHHTTSC
T ss_pred             CCCEEEEEECCeE---cccccccccceEEEEecCCHHHHHHHHHHHHHcCCCcceEEEECchh----------hcccccC
Confidence            5778887887766   33445667778999999999999988888877644468999998851          2222345


Q ss_pred             CccEEEEccc
Q 019722          114 PLNLLINNAG  123 (336)
Q Consensus       114 ~id~lv~nAg  123 (336)
                      .+|.++.+.+
T Consensus       100 ~~D~v~~~~~  109 (186)
T d1l3ia_         100 DIDIAVVGGS  109 (186)
T ss_dssp             CEEEEEESCC
T ss_pred             CcCEEEEeCc
Confidence            7899987643

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=92.56  E-value=0.11  Score=37.73  Aligned_cols=35  Identities=23%  Similarity=0.313  Sum_probs=30.4

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCCh
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGARLVLPARSL   69 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~   69 (336)
                      ++|.++|.| +|.+|.++|..|++.|.+|.++.+.+
T Consensus        29 ~~k~vvViG-gG~iG~E~A~~l~~~g~~Vtlie~~~   63 (123)
T d1nhpa2          29 EVNNVVVIG-SGYIGIEAAEAFAKAGKKVTVIDILD   63 (123)
T ss_dssp             TCCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             CCCEEEEEC-ChHHHHHHHHHhhccceEEEEEEecC
Confidence            467888886 68999999999999999999997764

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=92.53  E-value=0.077  Score=41.81  Aligned_cols=41  Identities=17%  Similarity=0.222  Sum_probs=33.6

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHH
Q 019722           36 VTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKA   77 (336)
Q Consensus        36 k~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~   77 (336)
                      +.+.|.| +|..|.++|..|++.|.+|.+.+|+++..+.+.+
T Consensus         8 ~KI~ViG-aG~wGtAlA~~La~~g~~V~l~~r~~~~~~~i~~   48 (189)
T d1n1ea2           8 NKAVVFG-SGAFGTALAMVLSKKCREVCVWHMNEEEVRLVNE   48 (189)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHHTTEEEEEEECSCHHHHHHHHH
T ss_pred             ceEEEEC-CCHHHHHHHHHHHHcCCeEEEEEecHHHHHHHhh
Confidence            3577787 5679999999999999999999999887665443

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=92.36  E-value=0.27  Score=35.16  Aligned_cols=33  Identities=24%  Similarity=0.205  Sum_probs=29.2

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCCh
Q 019722           36 VTAIITGATSGIGAETARVLAKRGARLVLPARSL   69 (336)
Q Consensus        36 k~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~   69 (336)
                      |.++|.| +|.+|.++|..|++.|.+|.++.|..
T Consensus        23 ~~v~IiG-gG~iG~E~A~~l~~~g~~Vtlv~~~~   55 (117)
T d1onfa2          23 KKIGIVG-SGYIAVELINVIKRLGIDSYIFARGN   55 (117)
T ss_dssp             SEEEEEC-CSHHHHHHHHHHHTTTCEEEEECSSS
T ss_pred             CEEEEEC-CchHHHHHHHHHHhccccceeeehhc
Confidence            6778887 68999999999999999999999863

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=92.33  E-value=0.11  Score=37.67  Aligned_cols=35  Identities=23%  Similarity=0.279  Sum_probs=30.6

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChH
Q 019722           35 SVTAIITGATSGIGAETARVLAKRGARLVLPARSLK   70 (336)
Q Consensus        35 gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~   70 (336)
                      +|.++|.| +|.+|.++|..|+++|.+|.++.+.+.
T Consensus        30 ~~~vvIIG-gG~iG~E~A~~l~~~g~~Vtli~~~~~   64 (121)
T d1d7ya2          30 QSRLLIVG-GGVIGLELAATARTAGVHVSLVETQPR   64 (121)
T ss_dssp             TCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CCeEEEEC-cchhHHHHHHHhhcccceEEEEeeccc
Confidence            57888887 789999999999999999999987753

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=92.29  E-value=0.12  Score=40.32  Aligned_cols=39  Identities=26%  Similarity=0.379  Sum_probs=34.7

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChH
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLK   70 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~   70 (336)
                      +.+.||++.|.| .|.||+.+++.|...|++|+..+|++.
T Consensus        38 ~~l~gk~vgIiG-~G~IG~~va~~l~~~g~~v~~~d~~~~   76 (181)
T d1qp8a1          38 PLIQGEKVAVLG-LGEIGTRVGKILAALGAQVRGFSRTPK   76 (181)
T ss_dssp             CCCTTCEEEEES-CSTHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             CcccCceEEEec-cccccccceeeeecccccccccccccc
Confidence            458999999999 566999999999999999999998753

>d1u0sy_ c.23.1.1 (Y:) CheY protein {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: CheY protein
species: Thermotoga maritima [TaxId: 2336]

Probab=92.28  E-value=0.95  Score=32.01  Aligned_cols=82  Identities=12%  Similarity=0.231  Sum_probs=56.4

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCCC
Q 019722           35 SVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLP  114 (336)
Q Consensus        35 gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  114 (336)
                      ||++||.=-...+-..+...|-+.|++|+..+.+...+-+   .+++.  ...+.++-.++-+.+.+ .+++++++....
T Consensus         1 GkrILivDD~~~~~~~l~~~L~~~g~~v~~~a~~~~~al~---~~~~~--~~dliilD~~mp~~~G~-e~~~~ir~~~~~   74 (118)
T d1u0sy_           1 GKRVLIVDDAAFMRMMLKDIITKAGYEVAGEATNGREAVE---KYKEL--KPDIVTMDITMPEMNGI-DAIKEIMKIDPN   74 (118)
T ss_dssp             CCEEEEECSCHHHHHHHHHHHHHTTCEEEEEESSHHHHHH---HHHHH--CCSEEEEECSCGGGCHH-HHHHHHHHHCTT
T ss_pred             CCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCHHHHHH---HHHhc--cCCEEEEecCCCCCCHH-HHHHHHHHhCCC
Confidence            7899999999999999999999999999877777554433   33333  23565555555444444 455566666666


Q ss_pred             ccEEEEcc
Q 019722          115 LNLLINNA  122 (336)
Q Consensus       115 id~lv~nA  122 (336)
                      +-+++..+
T Consensus        75 ~pvi~ls~   82 (118)
T d1u0sy_          75 AKIIVCSA   82 (118)
T ss_dssp             CCEEEEEC
T ss_pred             CcEEEEEc
Confidence            77776653

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=92.08  E-value=0.18  Score=38.36  Aligned_cols=41  Identities=22%  Similarity=0.258  Sum_probs=37.0

Q ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHH
Q 019722           32 NLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAE   73 (336)
Q Consensus        32 ~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~   73 (336)
                      -++||+++|.| =|-+|+.+|+.|...|++|+++..++-.+-
T Consensus        20 ~laGk~vvV~G-YG~vGrG~A~~~rg~Ga~V~V~E~DPi~al   60 (163)
T d1v8ba1          20 LISGKIVVICG-YGDVGKGCASSMKGLGARVYITEIDPICAI   60 (163)
T ss_dssp             CCTTSEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSCHHHHH
T ss_pred             eecCCEEEEec-ccccchhHHHHHHhCCCEEEEEecCchhhH
Confidence            47999999998 789999999999999999999999986543

>d1s6ya1 c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=92.06  E-value=0.74  Score=35.06  Aligned_cols=120  Identities=12%  Similarity=0.031  Sum_probs=62.1

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHCC----CEEEEeeCChHHHH-HHHHHH----HhhCCCCceEEEeccCCCHHHHHHHHH
Q 019722           36 VTAIITGATSGIGAETARVLAKRG----ARLVLPARSLKAAE-EAKARL----ASDCPGSDIVVLPLDLSSLSSVRNFVS  106 (336)
Q Consensus        36 k~~lItGgs~gIG~aia~~L~~~G----~~V~~~~r~~~~~~-~~~~~l----~~~~~~~~~~~~~~Dl~~~~~v~~~~~  106 (336)
                      |.++|=+|+.|.+.+++.-+....    .++++++.+++..+ +..+.+    .... +..+.+.  ..+|..+   .++
T Consensus         3 KI~iIGaGs~~~~~~~~~l~~~~~~~~~~eI~L~Di~e~~~~~~~~d~~~~~~~~~~-~~~~~~~--~~td~~~---al~   76 (169)
T d1s6ya1           3 KIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEGKEKLEIVGALAKRMVEKA-GVPIEIH--LTLDRRR---ALD   76 (169)
T ss_dssp             EEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGHHHHHHHHHHHHHHHHHT-TCCCEEE--EESCHHH---HHT
T ss_pred             EEEEECCChhhHHHHHHHHHHhccccCCCEEEEEcCCccHHHHHHHHHHHHHHHHhc-CCCceee--ecCCchh---hcC
Confidence            344444456677777777666542    38999998875421 222221    1111 2222222  2333321   121


Q ss_pred             HHHhcCCCccEEEEcccCCCCCCCCCchhhhhHHH------------------HHHhHHHHHHHHHHHHHHHhhccCCCC
Q 019722          107 QFHSLNLPLNLLINNAGKFAHQHAISEDGIEMTFA------------------TNYLGHFLLTKLLLKKMIETAKATGIQ  168 (336)
Q Consensus       107 ~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~------------------vn~~~~~~l~~~~~~~l~~~~~~~~~~  168 (336)
                             .-|++|+.||+...+      .+.+...                  ........+++.+.+.+.+..    +.
T Consensus        77 -------gaDvVv~ta~~~~~~------~~~r~~~i~~~~gi~~~~t~g~~~~~~~~~n~~i~~~i~~~i~~~~----pd  139 (169)
T d1s6ya1          77 -------GADFVTTQFRVGGLE------ARAKDERIPLKYGVIGQETNGPGGLFKGLRTIPVILDIIRDMEELC----PD  139 (169)
T ss_dssp             -------TCSEEEECCCTTHHH------HHHHHHHTGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHC----TT
T ss_pred             -------CCCEEEEccccCCCC------CeehhhhhhhhcCceeccccCcchhhhccccHHHHHHHHHHHhhcC----CC
Confidence                   569999999975421      1111100                  112334456677777776653    35


Q ss_pred             CeEEEEcCCc
Q 019722          169 GRIVNVSSSI  178 (336)
Q Consensus       169 grIV~vsS~~  178 (336)
                      +-++++|.+.
T Consensus       140 a~~i~vtNPv  149 (169)
T d1s6ya1         140 AWLINFTNPA  149 (169)
T ss_dssp             CEEEECSSSH
T ss_pred             eEEEEeCChH
Confidence            7777777653

>d2igta1 c.66.1.51 (A:1-309) Putative methyltransferase Atu0340 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Putative methyltransferase Atu0340
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=91.94  E-value=1.2  Score=37.44  Aligned_cols=84  Identities=17%  Similarity=0.082  Sum_probs=56.7

Q ss_pred             CCCEEEEeC-CCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCC-CCceEEEeccCCCHHHHHHHHHHHHhc
Q 019722           34 SSVTAIITG-ATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCP-GSDIVVLPLDLSSLSSVRNFVSQFHSL  111 (336)
Q Consensus        34 ~gk~~lItG-gs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~~  111 (336)
                      +++.||=.. ++|+++.+    ++..|++|+.++.+...++.+.++++.... +.++.++..|+.      +++++..+.
T Consensus       132 ~~~rVLdlf~~tG~~sl~----aa~~GA~V~~VD~s~~al~~a~~N~~ln~~~~~~~~~i~~D~~------~~l~~~~~~  201 (309)
T d2igta1         132 RPLKVLNLFGYTGVASLV----AAAAGAEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAM------KFIQREERR  201 (309)
T ss_dssp             SCCEEEEETCTTCHHHHH----HHHTTCEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHH------HHHHHHHHH
T ss_pred             CCCeEEEecCCCcHHHHH----HHhCCCeEEEEeChHHHHHHHHHhhhhhcccCCcEEEEeCCHH------HhHHHHhhc
Confidence            467787444 45555544    456799999999999988888777765432 346899988873      333443333


Q ss_pred             CCCccEEEEcccCCCC
Q 019722          112 NLPLNLLINNAGKFAH  127 (336)
Q Consensus       112 ~~~id~lv~nAg~~~~  127 (336)
                      -.+.|+||.+...+..
T Consensus       202 ~~~fD~IilDPP~f~~  217 (309)
T d2igta1         202 GSTYDIILTDPPKFGR  217 (309)
T ss_dssp             TCCBSEEEECCCSEEE
T ss_pred             CCCCCEEEECCCcccc
Confidence            4578999999765443

>d2fr1a2 c.2.1.2 (A:1448-1656) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=91.92  E-value=1.3  Score=34.45  Aligned_cols=145  Identities=9%  Similarity=-0.069  Sum_probs=77.8

Q ss_pred             CCCCCCEEEEeCCC--ChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHH
Q 019722           31 PNLSSVTAIITGAT--SGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQF  108 (336)
Q Consensus        31 ~~l~gk~~lItGgs--~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~  108 (336)
                      ....|+++++....  ..+..+++..|...|..|+.+.-+..                         .+.   ..+.+. 
T Consensus        21 ~~~~g~~lv~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~-------------------------~~~---~~l~~~-   71 (209)
T d2fr1a2          21 ARLDGTWLVAKYAGTADETSTAAREALESAGARVRELVVDAR-------------------------CGR---DELAER-   71 (209)
T ss_dssp             CCCCSEEEEEECTTSSHHHHHHHHHHHHTTSCEEEEEECCTT-------------------------CCH---HHHHHH-
T ss_pred             CCCCCcEEEEeCCCCchHHHHHHHHHHHhCCCeEEEecCCCc-------------------------cCH---HHHHHH-
Confidence            34566666665433  34777888888888887765543311                         112   222222 


Q ss_pred             HhcCCCccEEEEcccCCCCCCCCCchhhhhHHHHHHhHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCccccccCCccc
Q 019722          109 HSLNLPLNLLINNAGKFAHQHAISEDGIEMTFATNYLGHFLLTKLLLKKMIETAKATGIQGRIVNVSSSIHSWFSGDMIR  188 (336)
Q Consensus       109 ~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~~~grIV~vsS~~~~~~~~~~~~  188 (336)
                      ....+.++.+|+..+......... +.    ....+...+.++|++..    ..    ...++.+++..+......    
T Consensus        72 ~~~~~~~~~vv~l~~~~~~~~~~~-~~----~~~~~~~~l~l~qal~~----~~----~~~~l~~vT~~a~~~~~~----  134 (209)
T d2fr1a2          72 LRSVGEVAGVLSLLAVDEAEPEEA-PL----ALASLADTLSLVQAMVS----AE----LGCPLWTVTESAVATGPF----  134 (209)
T ss_dssp             HTTSCCCSEEEECTTTTCCCCSSC-GG----GCHHHHHHHHHHHHHHH----TT----CCCCEEEEEESCSCSSTT----
T ss_pred             hhccCCCCeEEEeCCCCCCCCcch-hH----HHHHHHHHHHHHHHHHh----CC----CCCcEEEEEcCCcccCCC----
Confidence            233467888888776543321111 11    11234555666666532    21    135677776643322110    


Q ss_pred             ccccccCCCCCCChhhHhHHHHHHHHHHHHHHHHHHccCCCcEEEEEee
Q 019722          189 YLGQISRNKSHYDATRAYALSKLANVLHTKELAQRLKQMEANVTVNCVH  237 (336)
Q Consensus       189 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g~~I~vn~v~  237 (336)
                                    -..-....+++.+|+|.++.|+....  ++...+.
T Consensus       135 --------------d~~~~p~~A~l~Gl~r~~~~E~P~l~--~~~vDl~  167 (209)
T d2fr1a2         135 --------------ERVRNAAHGALWGVGRVIALENPAVW--GGLVDVP  167 (209)
T ss_dssp             --------------SCCSCGGGHHHHHHHHHHHHHCGGGE--EEEEEEC
T ss_pred             --------------cccCCHhHHhHHHHHHHHHHhCCCce--EEEEECC
Confidence                          00113456789999999999987643  5555553

>d1m6ya2 c.66.1.23 (A:2-114,A:216-294) TM0872, methyltransferase domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermotoga maritima [TaxId: 2336]

Probab=91.82  E-value=0.28  Score=38.52  Aligned_cols=77  Identities=9%  Similarity=0.075  Sum_probs=59.2

Q ss_pred             EeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCCCccEEE
Q 019722           40 ITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLPLNLLI  119 (336)
Q Consensus        40 ItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~lv  119 (336)
                      +|-|+||...++.+.+ . +.+|+.++++++.++...+.+...  +.++.++..+.++...+   ++...  ...+|.++
T Consensus        30 ~t~G~Gghs~~il~~~-~-~~~vi~~D~d~~~l~~a~~~l~~~--~~r~~~~~~~f~~~~~~---~~~~~--~~~vdgIl  100 (192)
T d1m6ya2          30 CTVGEGGHSRAILEHC-P-GCRIIGIDVDSEVLRIAEEKLKEF--SDRVSLFKVSYREADFL---LKTLG--IEKVDGIL  100 (192)
T ss_dssp             TTCTTSHHHHHHHHHC-T-TCEEEEEESCHHHHHHHHHHTGGG--TTTEEEEECCGGGHHHH---HHHTT--CSCEEEEE
T ss_pred             ecCCCcHHHHHHHhcC-C-CCeEEEeechHHHHHHHHHhhccc--cccccchhHHHhhHHHH---HHHcC--CCCcceee
Confidence            6888999999998877 3 469999999999888777776554  56899999988765443   22221  35899999


Q ss_pred             EcccCC
Q 019722          120 NNAGKF  125 (336)
Q Consensus       120 ~nAg~~  125 (336)
                      ...|+.
T Consensus       101 ~DlGvS  106 (192)
T d1m6ya2         101 MDLGVS  106 (192)
T ss_dssp             EECSCC
T ss_pred             eccchh
Confidence            999974

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=91.80  E-value=0.13  Score=39.96  Aligned_cols=32  Identities=16%  Similarity=0.288  Sum_probs=27.7

Q ss_pred             EEEeCCCChHHHHHHHHHHHCCCEEEEeeCChH
Q 019722           38 AIITGATSGIGAETARVLAKRGARLVLPARSLK   70 (336)
Q Consensus        38 ~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~   70 (336)
                      +.|.| +|..|.++|..|++.|.+|.+.+|+.+
T Consensus         3 I~ViG-aG~~GtalA~~la~~g~~V~l~~r~~~   34 (180)
T d1txga2           3 VSILG-AGAMGSALSVPLVDNGNEVRIWGTEFD   34 (180)
T ss_dssp             EEEES-CCHHHHHHHHHHHHHCCEEEEECCGGG
T ss_pred             EEEEC-CCHHHHHHHHHHHHCCCEEEEEEeccc
Confidence            55676 689999999999999999999999654

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=91.74  E-value=0.37  Score=35.08  Aligned_cols=73  Identities=21%  Similarity=0.296  Sum_probs=54.4

Q ss_pred             EEEEeCCCChHHHHHHHHHHHCCCEEEEe-eCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCCCc
Q 019722           37 TAIITGATSGIGAETARVLAKRGARLVLP-ARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLPL  115 (336)
Q Consensus        37 ~~lItGgs~gIG~aia~~L~~~G~~V~~~-~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i  115 (336)
                      .+.|.|++|-.|+++++.+.++|+.++.. +++...          ......   +-.|+|.|+.+.+.++.+.+.  ++
T Consensus         2 ki~i~G~~GrMG~~i~~~~~~~~~~l~~~id~~~~~----------~~~~~D---VvIDFS~p~~~~~~l~~~~~~--~~   66 (128)
T d1vm6a3           2 KYGIVGYSGRMGQEIQKVFSEKGHELVLKVDVNGVE----------ELDSPD---VVIDFSSPEALPKTVDLCKKY--RA   66 (128)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEEETTEEE----------ECSCCS---EEEECSCGGGHHHHHHHHHHH--TC
T ss_pred             EEEEECCCCHHHHHHHHHHhcCCCeEEEEECCCcHH----------HhccCC---EEEEecCHHHHHHHHHHHHhc--CC
Confidence            47899999999999999999999976643 443221          111222   456999999999999988776  67


Q ss_pred             cEEEEcccC
Q 019722          116 NLLINNAGK  124 (336)
Q Consensus       116 d~lv~nAg~  124 (336)
                      -+++-..|.
T Consensus        67 p~ViGTTG~   75 (128)
T d1vm6a3          67 GLVLGTTAL   75 (128)
T ss_dssp             EEEECCCSC
T ss_pred             CEEEEcCCC
Confidence            788877775

>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Pseudomonas syringae [TaxId: 317]

Probab=91.61  E-value=0.21  Score=38.50  Aligned_cols=64  Identities=14%  Similarity=0.091  Sum_probs=47.6

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhC-----------CCCceEEEeccCCCHHH
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDC-----------PGSDIVVLPLDLSSLSS  100 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~-----------~~~~~~~~~~Dl~~~~~  100 (336)
                      .|.+||..|++.|   ..+..|+++|++|+.++.++..++.+.+......           .+..+.++.+|..+...
T Consensus        20 ~~~rvLd~GCG~G---~~a~~la~~G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~   94 (201)
T d1pjza_          20 PGARVLVPLCGKS---QDMSWLSGQGYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTA   94 (201)
T ss_dssp             TTCEEEETTTCCS---HHHHHHHHHCCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTH
T ss_pred             CCCEEEEecCcCC---HHHHHHHHcCCceEeecccHHHHHHHHHHhccccchhhhhhhhhccccccceeccccccccc
Confidence            6789999999887   4777999999999999999988877766554321           02345677778766443

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=91.54  E-value=0.092  Score=43.29  Aligned_cols=34  Identities=15%  Similarity=0.112  Sum_probs=29.1

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCCh
Q 019722           35 SVTAIITGATSGIGAETARVLAKRGARLVLPARSL   69 (336)
Q Consensus        35 gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~   69 (336)
                      +|.|+|.| +|--|...|.+|+++|++|.++.+++
T Consensus         1 ~KkV~IIG-aG~aGL~aA~~La~~G~~V~vlE~~~   34 (373)
T d1seza1           1 AKRVAVIG-AGVSGLAAAYKLKIHGLNVTVFEAEG   34 (373)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHTTSCEEEEECSSS
T ss_pred             CCEEEEEC-cCHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            58888887 56778999999999999999998653

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=91.50  E-value=0.12  Score=41.07  Aligned_cols=40  Identities=20%  Similarity=0.216  Sum_probs=35.8

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLK   70 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~   70 (336)
                      ..++.||++.|.| .|.||+.+++.|..-|++|+..++...
T Consensus        40 ~~~l~~ktvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~~   79 (199)
T d1dxya1          40 GKELGQQTVGVMG-TGHIGQVAIKLFKGFGAKVIAYDPYPM   79 (199)
T ss_dssp             CCCGGGSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             cccccceeeeeee-cccccccccccccccceeeeccCCccc
Confidence            4579999999998 789999999999999999999988643

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=91.44  E-value=0.19  Score=39.29  Aligned_cols=39  Identities=13%  Similarity=0.023  Sum_probs=35.0

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCCh
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSL   69 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~   69 (336)
                      ..++.++++.|.| .|.||+.+++.+...|++|+..++..
T Consensus        39 ~~~l~~~~vgiiG-~G~IG~~va~~l~~fg~~v~~~d~~~   77 (188)
T d1sc6a1          39 SFEARGKKLGIIG-YGHIGTQLGILAESLGMYVYFYDIEN   77 (188)
T ss_dssp             CCCSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred             cccccceEEEEee-cccchhhhhhhcccccceEeeccccc
Confidence            4579999999996 89999999999999999999998764

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=91.32  E-value=0.15  Score=40.38  Aligned_cols=37  Identities=22%  Similarity=0.146  Sum_probs=31.0

Q ss_pred             EEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHH
Q 019722           38 AIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEA   75 (336)
Q Consensus        38 ~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~   75 (336)
                      +.|. |.|.+|..+|..|+++|++|+.++.+++..+.+
T Consensus         3 I~Vi-GlG~vGl~~a~~la~~g~~V~g~D~n~~~i~~l   39 (202)
T d1mv8a2           3 ISIF-GLGYVGAVCAGCLSARGHEVIGVDVSSTKIDLI   39 (202)
T ss_dssp             EEEE-CCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred             EEEE-CCCHhHHHHHHHHHhCCCcEEEEeCCHHHHHHh
Confidence            3444 689999999999999999999999998765543

>d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Thermotoga maritima [TaxId: 2336]

Probab=91.22  E-value=0.57  Score=37.15  Aligned_cols=81  Identities=15%  Similarity=0.058  Sum_probs=59.4

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCC
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNL  113 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  113 (336)
                      .|.+||-.|+++|--.++..++...+.+|+.++.+++..+...+.++... -.++.++..|..+..          ...+
T Consensus        75 ~g~~VLdiG~GtG~~s~~la~~~~~~g~V~~id~~~~~~~~a~~~~~~~~-~~n~~~~~~d~~~~~----------~~~~  143 (213)
T d1dl5a1          75 KGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLG-IENVIFVCGDGYYGV----------PEFS  143 (213)
T ss_dssp             TTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTT-CCSEEEEESCGGGCC----------GGGC
T ss_pred             ccceEEEecCccchhHHHHHHHhCCCCcEEEeecchhhHHHhhhhHhhhc-ccccccccCchHHcc----------cccc
Confidence            56789999988887777776677666799999999998888877776543 357777777764311          1124


Q ss_pred             CccEEEEcccCC
Q 019722          114 PLNLLINNAGKF  125 (336)
Q Consensus       114 ~id~lv~nAg~~  125 (336)
                      ..|+++.+++..
T Consensus       144 ~fD~I~~~~~~~  155 (213)
T d1dl5a1         144 PYDVIFVTVGVD  155 (213)
T ss_dssp             CEEEEEECSBBS
T ss_pred             chhhhhhhccHH
Confidence            689999888753

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=91.22  E-value=0.22  Score=36.81  Aligned_cols=76  Identities=14%  Similarity=0.172  Sum_probs=52.7

Q ss_pred             EEEEeCCCChHHHHHHHHHHHC-CCEEEE-eeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCCC
Q 019722           37 TAIITGATSGIGAETARVLAKR-GARLVL-PARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLP  114 (336)
Q Consensus        37 ~~lItGgs~gIG~aia~~L~~~-G~~V~~-~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  114 (336)
                      ++.|.|++|-.|+++++.+.+. ++.++. +++... ...    +...  +..   +..|++.|+.+...++.+.+.  +
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~d~~~~-~~~----~~~~--~~D---vvIDFS~p~~~~~~~~~~~~~--~   68 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGDP-LSL----LTDG--NTE---VVIDFTHPDVVMGNLEFLIDN--G   68 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTSEEEEEECTTCC-THH----HHTT--TCS---EEEECCCTTTHHHHHHHHHHT--T
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCc-hhh----hccc--cCC---EEEEcccHHHHHHHHHHHHhc--C
Confidence            4789999999999999987765 456553 444322 111    1111  122   557999999999999988776  6


Q ss_pred             ccEEEEcccC
Q 019722          115 LNLLINNAGK  124 (336)
Q Consensus       115 id~lv~nAg~  124 (336)
                      +-+|+-..|+
T Consensus        69 ~~~ViGTTG~   78 (135)
T d1yl7a1          69 IHAVVGTTGF   78 (135)
T ss_dssp             CEEEECCCCC
T ss_pred             CCEEEecccc
Confidence            7788877775

>d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Maltose-6'-phosphate glucosidase GlvA
species: Bacillus subtilis [TaxId: 1423]

Probab=91.21  E-value=0.26  Score=37.75  Aligned_cols=121  Identities=11%  Similarity=0.096  Sum_probs=61.0

Q ss_pred             EEEEeCCCChHHHHHHHHHHHC-----CCEEEEeeCChHHHHHHHHHHHh---hCCCCceEEEeccCCCHHHHHHHHHHH
Q 019722           37 TAIITGATSGIGAETARVLAKR-----GARLVLPARSLKAAEEAKARLAS---DCPGSDIVVLPLDLSSLSSVRNFVSQF  108 (336)
Q Consensus        37 ~~lItGgs~gIG~aia~~L~~~-----G~~V~~~~r~~~~~~~~~~~l~~---~~~~~~~~~~~~Dl~~~~~v~~~~~~~  108 (336)
                      .+.|.||++.....++..|+.+     +.+|++++.++++++...+.+..   .. +........  +|   ..+.++  
T Consensus         5 KI~iIGaGsv~~~~~~~~ll~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~-~~~~~~~~~--~d---~~eal~--   76 (167)
T d1u8xx1           5 SIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREK-APDIEFAAT--TD---PEEAFT--   76 (167)
T ss_dssp             EEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHH-CTTSEEEEE--SC---HHHHHS--
T ss_pred             eEEEECCChhhhHHHHHHHHhhhhhcCCCEEEEEcCChhHHHHHHHHHHHHHHHh-CCCcceEec--CC---hhhccC--
Confidence            4556666553333344444432     23899999999987744443332   21 222322221  11   222222  


Q ss_pred             HhcCCCccEEEEcccCCCCCCCCCchhhhhHHHHHH----------------hHHHHHHHHHHHHHHHhhccCCCCCeEE
Q 019722          109 HSLNLPLNLLINNAGKFAHQHAISEDGIEMTFATNY----------------LGHFLLTKLLLKKMIETAKATGIQGRIV  172 (336)
Q Consensus       109 ~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~vn~----------------~~~~~l~~~~~~~l~~~~~~~~~~grIV  172 (336)
                           .-|++|..+|.....    ...-++.+..|+                .-....++.+.+.+.+.    ++.+-++
T Consensus        77 -----~AD~Vvitag~~~~~----g~~rd~~i~~~~Gi~~~~t~g~gg~~~~~r~i~ii~~i~~~i~~~----~P~A~li  143 (167)
T d1u8xx1          77 -----DVDFVMAHIRVGKYA----MRALDEQIPLKYGVVGQETCGPGGIAYGMRSIGGVLEILDYMEKY----SPDAWML  143 (167)
T ss_dssp             -----SCSEEEECCCTTHHH----HHHHHHHHHHTTTCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHHH----CTTCEEE
T ss_pred             -----CCCEEEECCCcCCCC----ceeHHHhhchhcCceeeccccCcchheehhhHHHHHHHHHHHHhh----CCCeEEE
Confidence                 679999999974332    111112222221                12334555666666554    3357777


Q ss_pred             EEcCCc
Q 019722          173 NVSSSI  178 (336)
Q Consensus       173 ~vsS~~  178 (336)
                      ++|.+.
T Consensus       144 ~~TNPv  149 (167)
T d1u8xx1         144 NYSNPA  149 (167)
T ss_dssp             ECCSCH
T ss_pred             EeCCHH
Confidence            777754

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=91.21  E-value=0.15  Score=38.35  Aligned_cols=33  Identities=15%  Similarity=0.162  Sum_probs=28.0

Q ss_pred             CCChHHHHHHHHHHHCCCEEEEeeCChHHHHHH
Q 019722           43 ATSGIGAETARVLAKRGARLVLPARSLKAAEEA   75 (336)
Q Consensus        43 gs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~   75 (336)
                      |.|-+|.++++.|+++|++|++.++++.+....
T Consensus         7 G~G~mG~~ia~~l~~~g~~v~~~~~~~~~~~~~   39 (152)
T d1i36a2           7 GFGEVAQTLASRLRSRGVEVVTSLEGRSPSTIE   39 (152)
T ss_dssp             SCSHHHHHHHHHHHHTTCEEEECCTTCCHHHHH
T ss_pred             cHHHHHHHHHHHHHHCCCeEEEEcCchhHHHHH
Confidence            579999999999999999999998877655443

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=90.94  E-value=0.15  Score=39.67  Aligned_cols=39  Identities=21%  Similarity=0.221  Sum_probs=33.7

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCCh
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSL   69 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~   69 (336)
                      .+.-+.|.++|.| +|.-|.+.|..|+++|++|.++.+++
T Consensus        38 ~~~~~~k~V~IIG-aGPAGL~AA~~la~~G~~Vtl~E~~~   76 (179)
T d1ps9a3          38 LPAVQKKNLAVVG-AGPAGLAFAINAAARGHQVTLFDAHS   76 (179)
T ss_dssp             CSCSSCCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred             CCCCCCcEEEEEC-ccHHHHHHHHHHHhhccceEEEeccC
Confidence            3456778999998 67889999999999999999998875

>d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=90.90  E-value=0.33  Score=38.83  Aligned_cols=79  Identities=20%  Similarity=0.158  Sum_probs=60.6

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCC
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNL  113 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  113 (336)
                      .|.+||..|+++|--.++..+|+  |.+|+.+.++++-.+...+.+.+.. -.++.++..|..+-          ....+
T Consensus        78 ~g~~VLeIGsGsGY~taila~l~--g~~V~~ie~~~~l~~~a~~~l~~~g-~~nv~~~~gd~~~g----------~~~~~  144 (215)
T d1jg1a_          78 PGMNILEVGTGSGWNAALISEIV--KTDVYTIERIPELVEFAKRNLERAG-VKNVHVILGDGSKG----------FPPKA  144 (215)
T ss_dssp             TTCCEEEECCTTSHHHHHHHHHH--CSCEEEEESCHHHHHHHHHHHHHTT-CCSEEEEESCGGGC----------CGGGC
T ss_pred             ccceEEEecCCCChhHHHHHHhh--CceeEEEeccHHHHHHHHHHHHHcC-CceeEEEECccccC----------CcccC
Confidence            57789999999999989888887  4679999999887777766666542 36899999998531          11235


Q ss_pred             CccEEEEcccCC
Q 019722          114 PLNLLINNAGKF  125 (336)
Q Consensus       114 ~id~lv~nAg~~  125 (336)
                      +.|.++.++++.
T Consensus       145 pfD~Iiv~~a~~  156 (215)
T d1jg1a_         145 PYDVIIVTAGAP  156 (215)
T ss_dssp             CEEEEEECSBBS
T ss_pred             cceeEEeecccc
Confidence            799999988864

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=90.79  E-value=0.15  Score=36.78  Aligned_cols=34  Identities=41%  Similarity=0.362  Sum_probs=29.5

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCCh
Q 019722           35 SVTAIITGATSGIGAETARVLAKRGARLVLPARSL   69 (336)
Q Consensus        35 gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~   69 (336)
                      +|.++|.| +|.+|.++|..|+++|.+|.++.|++
T Consensus        32 ~~~vvIiG-gG~iG~E~A~~l~~~g~~Vtlv~~~~   65 (122)
T d1xhca2          32 SGEAIIIG-GGFIGLELAGNLAEAGYHVKLIHRGA   65 (122)
T ss_dssp             HSEEEEEE-CSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCcEEEEC-CcHHHHHHHHHhhcccceEEEEeccc
Confidence            36777777 68999999999999999999998764

>d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PH1109
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=90.76  E-value=1.8  Score=31.68  Aligned_cols=87  Identities=9%  Similarity=0.029  Sum_probs=55.7

Q ss_pred             CCCEEEEeCCC---ChHHHHHHHHHHHCCCEEEEeeCChHHHH--HHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHH
Q 019722           34 SSVTAIITGAT---SGIGAETARVLAKRGARLVLPARSLKAAE--EAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQF  108 (336)
Q Consensus        34 ~gk~~lItGgs---~gIG~aia~~L~~~G~~V~~~~r~~~~~~--~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~  108 (336)
                      +-|++.|.|+|   +-.|..+++.|.+.|++|+.+..+.....  .....+...-....+..+   ...++.+..+++++
T Consensus        18 ~~ksIAVVGaS~~~~~~g~~v~~~L~~~g~~v~pVnP~~~~i~G~~~~~sl~dlp~~iD~v~i---~vp~~~~~~~~~e~   94 (139)
T d2d59a1          18 RYKKIALVGASPKPERDANIVMKYLLEHGYDVYPVNPKYEEVLGRKCYPSVLDIPDKIEVVDL---FVKPKLTMEYVEQA   94 (139)
T ss_dssp             HCCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEETTEECBSSGGGCSSCCSEEEE---CSCHHHHHHHHHHH
T ss_pred             cCCeEEEEeecCCCCCchHHHHHHHHHCCCEEEEECCcccccCCCcccccccccCccceEEEE---EeCHHHHHHHHHHH
Confidence            45899999998   57999999999999999998865432111  111111111001222222   24577888888887


Q ss_pred             HhcCCCccEEEEcccCC
Q 019722          109 HSLNLPLNLLINNAGKF  125 (336)
Q Consensus       109 ~~~~~~id~lv~nAg~~  125 (336)
                      .+.  ++..++...|..
T Consensus        95 ~~~--g~k~v~~~~G~~  109 (139)
T d2d59a1          95 IKK--GAKVVWFQYNTY  109 (139)
T ss_dssp             HHH--TCSEEEECTTCC
T ss_pred             HHh--CCCEEEEecccc
Confidence            765  567888877754

>d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ribosomal protein L11 methyltransferase PrmA
domain: PrmA-like protein TTHA0656 (TT0836)
species: Thermus thermophilus [TaxId: 274]

Probab=90.74  E-value=0.62  Score=38.14  Aligned_cols=73  Identities=21%  Similarity=0.172  Sum_probs=53.5

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcC
Q 019722           33 LSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLN  112 (336)
Q Consensus        33 l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  112 (336)
                      ..|+++|=.|+++|+   ++..+++.|++|+.++.++...+.+.++.+..  +.+..+++.|+.+      .   +  ..
T Consensus       119 ~~g~~VLDiGcGsG~---l~i~aa~~g~~V~gvDis~~av~~A~~na~~n--~~~~~~~~~d~~~------~---~--~~  182 (254)
T d2nxca1         119 RPGDKVLDLGTGSGV---LAIAAEKLGGKALGVDIDPMVLPQAEANAKRN--GVRPRFLEGSLEA------A---L--PF  182 (254)
T ss_dssp             CTTCEEEEETCTTSH---HHHHHHHTTCEEEEEESCGGGHHHHHHHHHHT--TCCCEEEESCHHH------H---G--GG
T ss_pred             CccCEEEEcccchhH---HHHHHHhcCCEEEEEECChHHHHHHHHHHHHc--CCceeEEeccccc------c---c--cc
Confidence            478899999999886   23456778999999999999888877776654  4566777776421      1   1  13


Q ss_pred             CCccEEEEc
Q 019722          113 LPLNLLINN  121 (336)
Q Consensus       113 ~~id~lv~n  121 (336)
                      ++.|+++.|
T Consensus       183 ~~fD~V~an  191 (254)
T d2nxca1         183 GPFDLLVAN  191 (254)
T ss_dssp             CCEEEEEEE
T ss_pred             cccchhhhc
Confidence            578999987

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=90.66  E-value=0.35  Score=34.81  Aligned_cols=32  Identities=28%  Similarity=0.334  Sum_probs=27.6

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCC
Q 019722           36 VTAIITGATSGIGAETARVLAKRGARLVLPARS   68 (336)
Q Consensus        36 k~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~   68 (336)
                      |.++|.| +|-||.++|..|.+.|.+|.++.|+
T Consensus        21 ~~vvIIG-gG~iG~E~A~~l~~lG~~Vtii~~~   52 (122)
T d1h6va2          21 GKTLVVG-ASYVALECAGFLAGIGLDVTVMVRS   52 (122)
T ss_dssp             CSEEEEC-CSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             CeEEEEC-CCccHHHHHHHHhhcCCeEEEEEec
Confidence            4566666 6899999999999999999999876

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=90.57  E-value=0.21  Score=40.10  Aligned_cols=34  Identities=29%  Similarity=0.499  Sum_probs=29.3

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCCh
Q 019722           35 SVTAIITGATSGIGAETARVLAKRGARLVLPARSL   69 (336)
Q Consensus        35 gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~   69 (336)
                      .|.|+|.| +|-.|.++|..|+++|++|.++.|+.
T Consensus         6 ~~kVvVIG-aGiaGl~~A~~L~~~G~~V~vier~~   39 (268)
T d1c0pa1           6 QKRVVVLG-SGVIGLSSALILARKGYSVHILARDL   39 (268)
T ss_dssp             SCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             CCcEEEEC-ccHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            35688887 68899999999999999999999863

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=90.32  E-value=0.21  Score=35.74  Aligned_cols=36  Identities=22%  Similarity=0.283  Sum_probs=31.4

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCCh
Q 019722           33 LSSVTAIITGATSGIGAETARVLAKRGARLVLPARSL   69 (336)
Q Consensus        33 l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~   69 (336)
                      ..+|.++|.| +|-||.++|..|++.|.+|.++.|.+
T Consensus        20 ~~~~~vvVvG-gG~ig~E~A~~l~~~g~~vt~i~~~~   55 (121)
T d1mo9a2          20 EPGSTVVVVG-GSKTAVEYGCFFNATGRRTVMLVRTE   55 (121)
T ss_dssp             CCCSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHhcchhheEeeccc
Confidence            3478888887 78999999999999999999998764

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=90.29  E-value=0.2  Score=35.70  Aligned_cols=33  Identities=24%  Similarity=0.195  Sum_probs=28.6

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCCh
Q 019722           36 VTAIITGATSGIGAETARVLAKRGARLVLPARSL   69 (336)
Q Consensus        36 k~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~   69 (336)
                      |.++|.| +|.+|.++|..|.+.|.+|.++.|.+
T Consensus        22 ~~vvIiG-gG~ig~E~A~~l~~~G~~Vtlve~~~   54 (116)
T d1gesa2          22 ERVAVVG-AGYIGVELGGVINGLGAKTHLFEMFD   54 (116)
T ss_dssp             SEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CEEEEEC-CChhhHHHHHHhhccccEEEEEeecc
Confidence            5667776 68999999999999999999998864

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=90.28  E-value=0.46  Score=34.10  Aligned_cols=33  Identities=18%  Similarity=0.287  Sum_probs=29.6

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCCh
Q 019722           36 VTAIITGATSGIGAETARVLAKRGARLVLPARSL   69 (336)
Q Consensus        36 k~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~   69 (336)
                      |.++|.| +|-||.++|..|.+.|.+|.++.|++
T Consensus        26 ~~~viiG-~G~iglE~A~~~~~~G~~Vtvi~~~~   58 (123)
T d1dxla2          26 KKLVVIG-AGYIGLEMGSVWGRIGSEVTVVEFAS   58 (123)
T ss_dssp             SEEEESC-CSHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CeEEEEc-cchHHHHHHHHHHhcCCeEEEEEEcc
Confidence            6788887 68999999999999999999998864

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=90.25  E-value=0.2  Score=42.06  Aligned_cols=35  Identities=26%  Similarity=0.420  Sum_probs=31.9

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEee
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGARLVLPA   66 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~   66 (336)
                      ++++||+++|-| .|.+|.++|+.|.+.|++|+.++
T Consensus        32 ~~L~gktvaIqG-fGnVG~~~A~~L~e~Gakvv~vs   66 (293)
T d1hwxa1          32 PGFGDKTFAVQG-FGNVGLHSMRYLHRFGAKCVAVG   66 (293)
T ss_dssp             SSSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEE
Confidence            479999999998 68999999999999999988775

>d1ws6a1 c.66.1.46 (A:15-185) Methyltransferase TTHA0928 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Methyltransferase TTHA0928
species: Thermus thermophilus [TaxId: 274]

Probab=90.23  E-value=0.6  Score=35.64  Aligned_cols=78  Identities=17%  Similarity=0.189  Sum_probs=49.1

Q ss_pred             CCCEEEEeCCC-ChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcC
Q 019722           34 SSVTAIITGAT-SGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLN  112 (336)
Q Consensus        34 ~gk~~lItGgs-~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  112 (336)
                      .|+.+|=.|++ |.+|    .+++.+|++|+.++.++...+.+.+.++...-..++....+|.        +........
T Consensus        41 ~g~~vLDl~~G~G~~~----i~a~~~ga~vv~vD~~~~a~~~~~~N~~~~~~~~~v~~~~~d~--------~~~~~~~~~  108 (171)
T d1ws6a1          41 RRGRFLDPFAGSGAVG----LEAASEGWEAVLVEKDPEAVRLLKENVRRTGLGARVVALPVEV--------FLPEAKAQG  108 (171)
T ss_dssp             TCCEEEEETCSSCHHH----HHHHHTTCEEEEECCCHHHHHHHHHHHHHHTCCCEEECSCHHH--------HHHHHHHTT
T ss_pred             CCCeEEEeccccchhh----hhhhhccchhhhcccCHHHHhhhhHHHHhhccccceeeeehhc--------ccccccccC
Confidence            57777755544 4444    4566789999999999998888877777653333433332222        122222334


Q ss_pred             CCccEEEEccc
Q 019722          113 LPLNLLINNAG  123 (336)
Q Consensus       113 ~~id~lv~nAg  123 (336)
                      .+.|+++.+..
T Consensus       109 ~~fD~If~DPP  119 (171)
T d1ws6a1         109 ERFTVAFMAPP  119 (171)
T ss_dssp             CCEEEEEECCC
T ss_pred             CccceeEEccc
Confidence            57999998864

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=90.15  E-value=0.12  Score=40.00  Aligned_cols=35  Identities=17%  Similarity=0.191  Sum_probs=29.4

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChH
Q 019722           35 SVTAIITGATSGIGAETARVLAKRGA-RLVLPARSLK   70 (336)
Q Consensus        35 gk~~lItGgs~gIG~aia~~L~~~G~-~V~~~~r~~~   70 (336)
                      +|.|+|.| +|-.|...|..|+++|+ .|.++.|+..
T Consensus         4 ~~kVaIIG-aGpaGl~aA~~l~~~G~~~V~v~E~~~~   39 (196)
T d1gtea4           4 SAKIALLG-AGPASISCASFLARLGYSDITIFEKQEY   39 (196)
T ss_dssp             GCCEEEEC-CSHHHHHHHHHHHHTTCCCEEEEESSSS
T ss_pred             CCEEEEEC-ChHHHHHHHHHHHHCCCCeEEEEEecCc
Confidence            47788887 68899999999999998 5989887653

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=89.85  E-value=0.24  Score=35.50  Aligned_cols=33  Identities=24%  Similarity=0.206  Sum_probs=29.2

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCCh
Q 019722           36 VTAIITGATSGIGAETARVLAKRGARLVLPARSL   69 (336)
Q Consensus        36 k~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~   69 (336)
                      +.++|.| +|-||.++|..|++.|.+|.++.+..
T Consensus        23 ~~i~IiG-~G~ig~E~A~~l~~~G~~Vtiv~~~~   55 (119)
T d3lada2          23 GKLGVIG-AGVIGLELGSVWARLGAEVTVLEAMD   55 (119)
T ss_dssp             SEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             CeEEEEC-CChHHHHHHHHHHHcCCceEEEEeec
Confidence            6788887 68999999999999999999988663

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=89.68  E-value=0.26  Score=36.14  Aligned_cols=35  Identities=20%  Similarity=0.231  Sum_probs=30.6

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCCh
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGARLVLPARSL   69 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~   69 (336)
                      .+|.++|.| +|.+|.++|..|++.|.+|.++.+.+
T Consensus        34 ~~k~v~VIG-gG~iG~E~A~~l~~~g~~Vtvie~~~   68 (133)
T d1q1ra2          34 ADNRLVVIG-GGYIGLEVAATAIKANMHVTLLDTAA   68 (133)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             cCCEEEEEC-CchHHHHHHHHHHhhCcceeeeeecc
Confidence            457888887 78999999999999999999998764

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=89.51  E-value=0.21  Score=35.47  Aligned_cols=33  Identities=21%  Similarity=0.235  Sum_probs=28.6

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCCh
Q 019722           36 VTAIITGATSGIGAETARVLAKRGARLVLPARSL   69 (336)
Q Consensus        36 k~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~   69 (336)
                      |.++|.| +|.+|.++|..|++.|.+|.++.+.+
T Consensus        22 ~~vvIiG-gG~~G~E~A~~l~~~g~~Vtlve~~~   54 (115)
T d1lvla2          22 QHLVVVG-GGYIGLELGIAYRKLGAQVSVVEARE   54 (115)
T ss_dssp             SEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CeEEEEC-CCHHHHHHHHHHhhcccceEEEeeec
Confidence            6677776 78999999999999999999998763

>d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical methyltransferase PH1305
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=89.48  E-value=0.57  Score=37.64  Aligned_cols=74  Identities=14%  Similarity=0.071  Sum_probs=55.0

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCC
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNL  113 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  113 (336)
                      ..+++|=.|+++|   .++..|+++|++|+.++.+++-++.+.+++...  +.++.++++|+.+..           ..+
T Consensus        41 ~~~~iLDiGcGtG---~~~~~l~~~~~~v~gvD~s~~mi~~a~~~~~~~--~~~i~~~~~d~~~l~-----------~~~  104 (251)
T d1wzna1          41 EVRRVLDLACGTG---IPTLELAERGYEVVGLDLHEEMLRVARRKAKER--NLKIEFLQGDVLEIA-----------FKN  104 (251)
T ss_dssp             CCCEEEEETCTTC---HHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCCEEEESCGGGCC-----------CCS
T ss_pred             CCCEEEEeCCCCC---ccchhhcccceEEEEEeeccccccccccccccc--cccchheehhhhhcc-----------ccc
Confidence            4578999998877   446678899999999999988777666665544  457999999986542           123


Q ss_pred             CccEEEEccc
Q 019722          114 PLNLLINNAG  123 (336)
Q Consensus       114 ~id~lv~nAg  123 (336)
                      ..|++++.-+
T Consensus       105 ~fD~I~~~~~  114 (251)
T d1wzna1         105 EFDAVTMFFS  114 (251)
T ss_dssp             CEEEEEECSS
T ss_pred             ccchHhhhhh
Confidence            6898887544

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=89.40  E-value=0.23  Score=40.54  Aligned_cols=35  Identities=29%  Similarity=0.369  Sum_probs=31.9

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEee
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGARLVLPA   66 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~   66 (336)
                      .+++||+++|-| .|.+|.++|+.|.+.|++|+.++
T Consensus        27 ~~l~g~~v~IqG-fGnVG~~~a~~L~~~Gakvv~vs   61 (242)
T d1v9la1          27 GGIEGKTVAIQG-MGNVGRWTAYWLEKMGAKVIAVS   61 (242)
T ss_dssp             SCCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEE
T ss_pred             CCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEee
Confidence            379999999997 89999999999999999988765

>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Clostridium symbiosum [TaxId: 1512]

Probab=89.32  E-value=0.2  Score=41.31  Aligned_cols=35  Identities=26%  Similarity=0.305  Sum_probs=31.8

Q ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEee
Q 019722           31 PNLSSVTAIITGATSGIGAETARVLAKRGARLVLPA   66 (336)
Q Consensus        31 ~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~   66 (336)
                      .+++||+++|-| .|.+|..+++.|.+.|++|+.++
T Consensus        32 ~~l~g~~v~IQG-fGnVG~~~a~~L~e~Gakvvavs   66 (255)
T d1bgva1          32 DTLVGKTVALAG-FGNVAWGAAKKLAELGAKAVTLS   66 (255)
T ss_dssp             CCSTTCEEEECC-SSHHHHHHHHHHHHHTCEEEEEE
T ss_pred             CCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEe
Confidence            469999999999 79999999999999999988764

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=88.77  E-value=0.25  Score=37.30  Aligned_cols=35  Identities=14%  Similarity=0.212  Sum_probs=29.6

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC--EEEEeeCCh
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGA--RLVLPARSL   69 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~--~V~~~~r~~   69 (336)
                      +||+++|.| +|..|..+|..|.+++.  +|+++.+++
T Consensus         1 ~gkrivIvG-gG~~G~e~A~~l~~~~~~~~Vtlie~~~   37 (186)
T d1fcda1           1 AGRKVVVVG-GGTGGATAAKYIKLADPSIEVTLIEPNT   37 (186)
T ss_dssp             CCCEEEEEC-CSHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred             CCCcEEEEC-ccHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence            589999999 57789999999999884  788887664

>d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.67  E-value=0.94  Score=36.16  Aligned_cols=82  Identities=12%  Similarity=0.082  Sum_probs=62.1

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCC----CCceEEEeccCCCHHHHHHHHHHHH
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCP----GSDIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~----~~~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      .|..||-.|+++|--.++..+++....+|+.+.++++-++.+.+.+++...    -.++.+...|..+..          
T Consensus        76 ~g~~VLdiG~GsGy~ta~la~l~~~~g~V~~ie~~~~l~~~a~~~l~~~~~~~~~~~~~~~~~gD~~~~~----------  145 (224)
T d1i1na_          76 EGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGY----------  145 (224)
T ss_dssp             TTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCC----------
T ss_pred             CCCeEEEecCCCCHHHHHHHHHhCCCceEEEEcCCHHHHHHHHHhccccCcccccccceEEEEeeccccc----------
Confidence            467999999999998888888888888999999999888877777765422    246778888864211          


Q ss_pred             hcCCCccEEEEcccCC
Q 019722          110 SLNLPLNLLINNAGKF  125 (336)
Q Consensus       110 ~~~~~id~lv~nAg~~  125 (336)
                      ...+..|+++.+++..
T Consensus       146 ~~~~~fD~I~~~~~~~  161 (224)
T d1i1na_         146 AEEAPYDAIHVGAAAP  161 (224)
T ss_dssp             GGGCCEEEEEECSBBS
T ss_pred             chhhhhhhhhhhcchh
Confidence            1134789999998753

>d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.63  E-value=0.35  Score=38.72  Aligned_cols=79  Identities=11%  Similarity=0.063  Sum_probs=54.3

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhh----------------CCCCceEEEeccCCC
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASD----------------CPGSDIVVLPLDLSS   97 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~----------------~~~~~~~~~~~Dl~~   97 (336)
                      .|.+||..|++.|   ..+..|+++|++|+.++-++...+.+.++....                ..+.++.++.+|+.+
T Consensus        45 ~~~rvLd~GCG~G---~~a~~LA~~G~~V~gvD~S~~ai~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~  121 (229)
T d2bzga1          45 SGLRVFFPLCGKA---VEMKWFADRGHSVVGVEISELGIQEFFTEQNLSYSEEPITEIPGTKVFKSSSGNISLYCCSIFD  121 (229)
T ss_dssp             CSCEEEETTCTTC---THHHHHHHTTCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCGGG
T ss_pred             CCCEEEEeCCCCc---HHHHHHHhCCCcEEEEeCCHHHHHHHHHHhhccccccchhcccccceeeecCCcEEEEEcchhh
Confidence            6789999999887   468888999999999999998877665543211                113467888888753


Q ss_pred             HHHHHHHHHHHHhcCCCccEEEEcccC
Q 019722           98 LSSVRNFVSQFHSLNLPLNLLINNAGK  124 (336)
Q Consensus        98 ~~~v~~~~~~~~~~~~~id~lv~nAg~  124 (336)
                      ...         ...+..|+++....+
T Consensus       122 l~~---------~~~~~fd~i~~~~~l  139 (229)
T d2bzga1         122 LPR---------TNIGKFDMIWDRGAL  139 (229)
T ss_dssp             GGG---------SCCCCEEEEEESSST
T ss_pred             ccc---------cccCceeEEEEEEEE
Confidence            321         112456777665544

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=88.51  E-value=0.82  Score=35.29  Aligned_cols=47  Identities=11%  Similarity=0.193  Sum_probs=37.1

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKA   77 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~   77 (336)
                      .+...--.++|.| .+-.|.+.++.....|++|.+++.+.++.+++..
T Consensus        24 ~g~V~pa~VvViG-aGvaG~~Aa~~A~~lGA~V~v~D~~~~~~~~l~~   70 (183)
T d1l7da1          24 AGTVPPARVLVFG-VGVAGLQAIATAKRLGAVVMATDVRAATKEQVES   70 (183)
T ss_dssp             TEEECCCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHH
T ss_pred             cCCcCCcEEEEEc-CcHHHHHHHHHHHHcCCEEEEEeccHHHHHHHHH
Confidence            3334445788888 5788999999999999999999999887665543

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=88.50  E-value=3.2  Score=30.71  Aligned_cols=44  Identities=23%  Similarity=0.266  Sum_probs=32.5

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHC--CCEEEEee--CChHHHHHHHHHH
Q 019722           36 VTAIITGATSGIGAETARVLAKR--GARLVLPA--RSLKAAEEAKARL   79 (336)
Q Consensus        36 k~~lItGgs~gIG~aia~~L~~~--G~~V~~~~--r~~~~~~~~~~~l   79 (336)
                      |.+.|.|+||-||.....-+.++  .++|+.+.  +|-+.+.+...+.
T Consensus         2 K~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~~N~~~L~~q~~~f   49 (151)
T d1q0qa2           2 KQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGKNVTRMVEQCLEF   49 (151)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEESSCHHHHHHHHHHH
T ss_pred             CeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEecCcHHHHHHHHHHH
Confidence            67899999999999999988876  36766544  5655555555444

>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glycine oxidase ThiO
species: Bacillus sp. [TaxId: 1409]

Probab=88.49  E-value=0.19  Score=41.17  Aligned_cols=31  Identities=29%  Similarity=0.305  Sum_probs=27.7

Q ss_pred             EEEeCCCChHHHHHHHHHHHCCCEEEEeeCCh
Q 019722           38 AIITGATSGIGAETARVLAKRGARLVLPARSL   69 (336)
Q Consensus        38 ~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~   69 (336)
                      |+|.| +|-.|.++|.+|+++|.+|+++.++.
T Consensus         7 vvIIG-aGi~Gls~A~~La~~G~~V~vlE~~~   37 (276)
T d1ryia1           7 AVVIG-GGIIGSAIAYYLAKENKNTALFESGT   37 (276)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEEC-cCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            67776 78999999999999999999999864

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=88.42  E-value=0.37  Score=38.62  Aligned_cols=37  Identities=27%  Similarity=0.377  Sum_probs=31.7

Q ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCCh
Q 019722           32 NLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSL   69 (336)
Q Consensus        32 ~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~   69 (336)
                      .-++|.++|.| +|--|.+.|..|+++|++|.++.++.
T Consensus        46 ~~~~k~VvIIG-aGpAGl~aA~~l~~~G~~v~l~E~~~   82 (233)
T d1djqa3          46 TKNKDSVLIVG-AGPSGSEAARVLMESGYTVHLTDTAE   82 (233)
T ss_dssp             CSSCCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             ccCCceEEEEc-ccHHHHHHHHHHHHhccceeeEeecc
Confidence            45788999998 56779999999999999999998664

>d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=88.39  E-value=1  Score=33.47  Aligned_cols=84  Identities=15%  Similarity=0.149  Sum_probs=53.5

Q ss_pred             EEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCC----CceEEEeccCCCHHHHHHHHHHHHhcCC
Q 019722           38 AIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPG----SDIVVLPLDLSSLSSVRNFVSQFHSLNL  113 (336)
Q Consensus        38 ~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~----~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  113 (336)
                      +-+.| .|-+|..+|+.|++.|+.+ +..|+.++..+..++.......    .....+-..+.+...+....+.+.....
T Consensus         3 Ig~IG-lG~MG~~ma~~L~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~v~~~~~~l~~~~~   80 (156)
T d2cvza2           3 VAFIG-LGAMGYPMAGHLARRFPTL-VWNRTFEKALRHQEEFGSEAVPLERVAEARVIFTCLPTTREVYEVAEALYPYLR   80 (156)
T ss_dssp             EEEEC-CSTTHHHHHHHHHTTSCEE-EECSSTHHHHHHHHHHCCEECCGGGGGGCSEEEECCSSHHHHHHHHHHHTTTCC
T ss_pred             EEEEe-HHHHHHHHHHHHHhCCCEE-EEeCCHHHHHHHHHHcCCcccccccccceeEEEecccchhhhhhhhcccccccc
Confidence            34455 5899999999999888754 6788888777766654321100    1222233345567788888877776655


Q ss_pred             CccEEEEccc
Q 019722          114 PLNLLINNAG  123 (336)
Q Consensus       114 ~id~lv~nAg  123 (336)
                      +-.++|.+..
T Consensus        81 ~~~~iid~sT   90 (156)
T d2cvza2          81 EGTYWVDATS   90 (156)
T ss_dssp             TTEEEEECSC
T ss_pred             cccccccccc
Confidence            5556665554

>d1g6q1_ c.66.1.6 (1:) Arginine methyltransferase, HMT1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Arginine methyltransferase, HMT1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=87.67  E-value=1.2  Score=37.72  Aligned_cols=77  Identities=19%  Similarity=0.163  Sum_probs=53.7

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhc
Q 019722           33 LSSVTAIITGATSGIGAETARVLAKRGA-RLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSL  111 (336)
Q Consensus        33 l~gk~~lItGgs~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  111 (336)
                      ++|++||-.|++.|+   ++..++++|+ +|+.++.++ .+..+.+..+......++.++..|+.+..          -.
T Consensus        37 ~~~~~VLDlGcGtG~---ls~~aa~~Ga~~V~avd~s~-~~~~a~~~~~~~~~~~~i~~i~~~~~~l~----------~~  102 (328)
T d1g6q1_          37 FKDKIVLDVGCGTGI---LSMFAAKHGAKHVIGVDMSS-IIEMAKELVELNGFSDKITLLRGKLEDVH----------LP  102 (328)
T ss_dssp             HTTCEEEEETCTTSH---HHHHHHHTCCSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTTSC----------CS
T ss_pred             CCcCEEEEeCCCCCH---HHHHHHHhCCCEEEEEeCCH-HHHHHHHHHHHhCccccceEEEeehhhcc----------Cc
Confidence            478999999998874   4556778897 798998875 34444444444444678999999987642          11


Q ss_pred             CCCccEEEEccc
Q 019722          112 NLPLNLLINNAG  123 (336)
Q Consensus       112 ~~~id~lv~nAg  123 (336)
                      ....|+++...-
T Consensus       103 ~~~~D~i~se~~  114 (328)
T d1g6q1_         103 FPKVDIIISEWM  114 (328)
T ss_dssp             SSCEEEEEECCC
T ss_pred             ccceeEEEEEec
Confidence            246899987653

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=87.40  E-value=0.38  Score=38.85  Aligned_cols=34  Identities=24%  Similarity=0.207  Sum_probs=28.6

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCCh
Q 019722           35 SVTAIITGATSGIGAETARVLAKRGARLVLPARSL   69 (336)
Q Consensus        35 gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~   69 (336)
                      .+.|+|.| +|--|..+|..|+++|.+|+++.|+.
T Consensus         4 ~~kV~IiG-aG~aGl~~A~~L~~~G~~v~v~Er~~   37 (265)
T d2voua1           4 TDRIAVVG-GSISGLTAALMLRDAGVDVDVYERSP   37 (265)
T ss_dssp             CSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCcEEEEC-cCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            36788887 57778888999999999999998864

>d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical protein PH0226
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=87.28  E-value=1.4  Score=34.35  Aligned_cols=75  Identities=16%  Similarity=0.038  Sum_probs=55.1

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCCC
Q 019722           35 SVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLP  114 (336)
Q Consensus        35 gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  114 (336)
                      +.++|=.|+++|.   ++..|++.|++|+.++.+++.++.+.+.+...  +.++..+..|..+..          -....
T Consensus        38 ~~~ILDiGcG~G~---~~~~la~~~~~v~giD~S~~~i~~ak~~~~~~--~~~~~~~~~d~~~l~----------~~~~~  102 (226)
T d1ve3a1          38 RGKVLDLACGVGG---FSFLLEDYGFEVVGVDISEDMIRKAREYAKSR--ESNVEFIVGDARKLS----------FEDKT  102 (226)
T ss_dssp             CCEEEEETCTTSH---HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCCEEEECCTTSCC----------SCTTC
T ss_pred             CCEEEEECCCcch---hhhhHhhhhcccccccccccchhhhhhhhccc--ccccccccccccccc----------ccCcC
Confidence            3578889988876   66788899999999999988887776666554  456778888876532          11246


Q ss_pred             ccEEEEcccC
Q 019722          115 LNLLINNAGK  124 (336)
Q Consensus       115 id~lv~nAg~  124 (336)
                      .|+++++..+
T Consensus       103 fD~I~~~~~l  112 (226)
T d1ve3a1         103 FDYVIFIDSI  112 (226)
T ss_dssp             EEEEEEESCG
T ss_pred             ceEEEEecch
Confidence            8998887543

>d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Sulfolobus tokodaii [TaxId: 111955]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Sulfolobus tokodaii [TaxId: 111955]

Probab=87.15  E-value=1.3  Score=35.41  Aligned_cols=75  Identities=15%  Similarity=0.026  Sum_probs=53.0

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCC
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNL  113 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  113 (336)
                      .|.+||-.|+++|--.+   .|++.+.+|+.+.++++..+.+.+.+..   ..++.++..|...-          ....+
T Consensus        70 ~g~~VLdIG~GsGy~ta---~La~l~~~V~aiE~~~~~~~~A~~~~~~---~~nv~~~~~d~~~g----------~~~~~  133 (224)
T d1vbfa_          70 KGQKVLEIGTGIGYYTA---LIAEIVDKVVSVEINEKMYNYASKLLSY---YNNIKLILGDGTLG----------YEEEK  133 (224)
T ss_dssp             TTCEEEEECCTTSHHHH---HHHHHSSEEEEEESCHHHHHHHHHHHTT---CSSEEEEESCGGGC----------CGGGC
T ss_pred             ccceEEEecCCCCHHHH---HHHHHhcccccccccHHHHHHHHHHHhc---ccccccccCchhhc----------chhhh
Confidence            66789999988886544   4555567999999998877766554433   35889998887531          01135


Q ss_pred             CccEEEEcccC
Q 019722          114 PLNLLINNAGK  124 (336)
Q Consensus       114 ~id~lv~nAg~  124 (336)
                      +.|.++.+++.
T Consensus       134 pfD~Iiv~~a~  144 (224)
T d1vbfa_         134 PYDRVVVWATA  144 (224)
T ss_dssp             CEEEEEESSBB
T ss_pred             hHHHHHhhcch
Confidence            78999988875

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=86.93  E-value=0.35  Score=40.90  Aligned_cols=35  Identities=26%  Similarity=0.307  Sum_probs=29.6

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCCh
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGARLVLPARSL   69 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~   69 (336)
                      +.|.++|.| +|--|+.+|..|+++|.+|.++.++.
T Consensus         1 k~KKI~IIG-aG~sGL~aA~~L~k~G~~V~viEk~~   35 (314)
T d2bi7a1           1 KSKKILIVG-AGFSGAVIGRQLAEKGHQVHIIDQRD   35 (314)
T ss_dssp             CCCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred             CCCEEEEEC-CcHHHHHHHHHHHhCCCCEEEEECCC
Confidence            368889998 57788899999999999999988664

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=86.89  E-value=0.39  Score=34.71  Aligned_cols=34  Identities=26%  Similarity=0.248  Sum_probs=29.5

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCCh
Q 019722           35 SVTAIITGATSGIGAETARVLAKRGARLVLPARSL   69 (336)
Q Consensus        35 gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~   69 (336)
                      .+.++|.| +|-||.++|..|.+.|.+|.++.+.+
T Consensus        26 p~~vvIiG-gG~IG~E~A~~~~~~G~~Vtive~~~   59 (125)
T d1ojta2          26 PGKLLIIG-GGIIGLEMGTVYSTLGSRLDVVEMMD   59 (125)
T ss_dssp             CSEEEEES-CSHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCeEEEEC-CCHHHHHHHHHhhcCCCEEEEEEeec
Confidence            36788887 68999999999999999999997653

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=86.61  E-value=0.3  Score=38.57  Aligned_cols=31  Identities=16%  Similarity=0.191  Sum_probs=27.5

Q ss_pred             EEEeCCCChHHHHHHHHHHHCCCEEEEeeCCh
Q 019722           38 AIITGATSGIGAETARVLAKRGARLVLPARSL   69 (336)
Q Consensus        38 ~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~   69 (336)
                      |+|.| +|--|..+|..|+++|.+|.++.++.
T Consensus         8 viViG-aG~~Gl~~A~~La~~G~~V~vlE~~~   38 (297)
T d2bcgg1           8 VIVLG-TGITECILSGLLSVDGKKVLHIDKQD   38 (297)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEEC-cCHHHHHHHHHHHHCCCCEEEEcCCC
Confidence            67887 78889999999999999999998764

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=86.28  E-value=0.42  Score=39.67  Aligned_cols=35  Identities=26%  Similarity=0.307  Sum_probs=29.7

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCCh
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGARLVLPARSL   69 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~   69 (336)
                      ..|.|+|.| +|--|.+.|..|+++|++|.++.+++
T Consensus        29 ~pkkV~IIG-aG~aGLsaA~~L~~~G~~V~vlE~~~   63 (370)
T d2iida1          29 NPKHVVIVG-AGMAGLSAAYVLAGAGHQVTVLEASE   63 (370)
T ss_dssp             SCCEEEEEC-CBHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCCeEEEEC-CCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            447888998 56779999999999999999998764

>d1iuka_ c.2.1.8 (A:) Hypothetical protein TT1466 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein TT1466
species: Thermus thermophilus [TaxId: 274]

Probab=86.22  E-value=2.9  Score=30.31  Aligned_cols=85  Identities=22%  Similarity=0.230  Sum_probs=49.5

Q ss_pred             CCEEEEeCCC---ChHHHHHHHHHHHCCCEEEEeeCChHH----HHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHH
Q 019722           35 SVTAIITGAT---SGIGAETARVLAKRGARLVLPARSLKA----AEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQ  107 (336)
Q Consensus        35 gk~~lItGgs---~gIG~aia~~L~~~G~~V~~~~r~~~~----~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~  107 (336)
                      -|++.|.|+|   +-.|..+++.|.+.|++++.+.-++..    .......+...-....+..+   ...++.+..++++
T Consensus        13 pksIAVVGaS~~~~k~g~~v~~~L~~~g~~~~~v~~~~~~~~i~g~~~~~~l~~i~~~iD~v~v---~~p~~~v~~~v~~   89 (136)
T d1iuka_          13 AKTIAVLGAHKDPSRPAHYVPRYLREQGYRVLPVNPRFQGEELFGEEAVASLLDLKEPVDILDV---FRPPSALMDHLPE   89 (136)
T ss_dssp             CCEEEEETCCSSTTSHHHHHHHHHHHTTCEEEEECGGGTTSEETTEECBSSGGGCCSCCSEEEE---CSCHHHHTTTHHH
T ss_pred             CCeEEEEeecCCCCCchHHHHHHHhcCCCCceEEEeccccceeeceecccchhhccCCCceEEE---eccHHHHHHHHHH
Confidence            4789999998   469999999999999998887543320    00011111111001122222   2346666777777


Q ss_pred             HHhcCCCccEEEEcccC
Q 019722          108 FHSLNLPLNLLINNAGK  124 (336)
Q Consensus       108 ~~~~~~~id~lv~nAg~  124 (336)
                      +.+.  ++..++...|.
T Consensus        90 ~~~~--g~k~i~~q~G~  104 (136)
T d1iuka_          90 VLAL--RPGLVWLQSGI  104 (136)
T ss_dssp             HHHH--CCSCEEECTTC
T ss_pred             HHhh--CCCeEEEecCc
Confidence            6654  45566666665

>d1yb2a1 c.66.1.13 (A:6-255) Hypothetical protein Ta0852 {Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein Ta0852
species: Thermoplasma acidophilum [TaxId: 2303]

Probab=85.65  E-value=2  Score=34.77  Aligned_cols=77  Identities=13%  Similarity=0.138  Sum_probs=56.8

Q ss_pred             CCCEEEEeCCCCh-HHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcC
Q 019722           34 SSVTAIITGATSG-IGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLN  112 (336)
Q Consensus        34 ~gk~~lItGgs~g-IG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  112 (336)
                      .|.++|=.|+++| +..++++.+.. +.+|+.++++++.++.+.+++++.....++.+...|+.+.-           ..
T Consensus        85 pG~rVLEiG~GsG~lt~~la~~v~~-~g~V~~vD~~e~~~~~A~~n~~~~~~~~nv~~~~~Di~~~~-----------~~  152 (250)
T d1yb2a1          85 PGMDILEVGVGSGNMSSYILYALNG-KGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIADFI-----------SD  152 (250)
T ss_dssp             TTCEEEEECCTTSHHHHHHHHHHTT-SSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTTCC-----------CS
T ss_pred             CcCEEEEeeeeCcHHHHHHHHHhCC-CcEEEEEECCHHHHHHHHHHHHHhcCCCceEEEEeeeeccc-----------cc
Confidence            5778998888766 45555655543 34999999999999988888877655678999999986521           12


Q ss_pred             CCccEEEEcc
Q 019722          113 LPLNLLINNA  122 (336)
Q Consensus       113 ~~id~lv~nA  122 (336)
                      ..+|.++.+.
T Consensus       153 ~~fD~V~ld~  162 (250)
T d1yb2a1         153 QMYDAVIADI  162 (250)
T ss_dssp             CCEEEEEECC
T ss_pred             ceeeeeeecC
Confidence            3689998753

>d2b3ta1 c.66.1.30 (A:2-275) N5-glutamine methyltransferase, HemK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: N5-glutamine methyltransferase, HemK
domain: N5-glutamine methyltransferase, HemK
species: Escherichia coli [TaxId: 562]

Probab=85.46  E-value=1.6  Score=35.95  Aligned_cols=77  Identities=16%  Similarity=0.118  Sum_probs=54.9

Q ss_pred             EEEEeC-CCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCCCc
Q 019722           37 TAIITG-ATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLPL  115 (336)
Q Consensus        37 ~~lItG-gs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i  115 (336)
                      .+|=.| |||-||.+++..+  ...+|+.++.++..++.+.++++.... .++.+++.|+.+.-           ...++
T Consensus       111 ~vlDlGtGSG~I~i~la~~~--p~~~v~avDis~~Al~~A~~Na~~~~~-~~v~~~~~d~~~~~-----------~~~~f  176 (274)
T d2b3ta1         111 RILDLGTGTGAIALALASER--PDCEIIAVDRMPDAVSLAQRNAQHLAI-KNIHILQSDWFSAL-----------AGQQF  176 (274)
T ss_dssp             EEEEETCTTSHHHHHHHHHC--TTSEEEEECSSHHHHHHHHHHHHHHTC-CSEEEECCSTTGGG-----------TTCCE
T ss_pred             ceeeeehhhhHHHHHHHhhC--CcceeeeccchhHHHhHHHHHHHHhCc-ccceeeeccccccc-----------CCCce
Confidence            455444 4566776666554  346999999999998888888776532 36999999986541           12479


Q ss_pred             cEEEEcccCCCC
Q 019722          116 NLLINNAGKFAH  127 (336)
Q Consensus       116 d~lv~nAg~~~~  127 (336)
                      |++|.|..+...
T Consensus       177 DlIvsNPPYi~~  188 (274)
T d2b3ta1         177 AMIVSNPPYIDE  188 (274)
T ss_dssp             EEEEECCCCBCT
T ss_pred             eEEEecchhhhh
Confidence            999999987654

>d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=85.22  E-value=0.51  Score=34.19  Aligned_cols=76  Identities=16%  Similarity=0.239  Sum_probs=52.4

Q ss_pred             CCCEEEEeCCCC----------hHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHH
Q 019722           34 SSVTAIITGATS----------GIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRN  103 (336)
Q Consensus        34 ~gk~~lItGgs~----------gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~  103 (336)
                      ..|.+||.|++.          .-+.+.+++|.+.|++++++..|++....-.+.      .+++.+-+.   ..+.+..
T Consensus         6 ~~kkvlilGsGp~~IGq~~EfDy~~~~a~~alke~g~~~iliN~NP~TVstd~d~------aD~lYfePl---t~e~v~~   76 (127)
T d1a9xa3           6 DIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVINVNSNPATIMTDPEM------ADATYIEPI---HWEVVRK   76 (127)
T ss_dssp             SCCEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHHTCEEEEECSCTTCGGGCGGG------SSEEECSCC---CHHHHHH
T ss_pred             CCCEEEEECCCcCcccccchhHHHHHHHHHHHHHcCCeEEEecCchHhhhcChhh------cceeeeecC---CHHHHHH
Confidence            457899998853          457788999999999999999998764321110      345555443   3567777


Q ss_pred             HHHHHHhcCCCccEEEEccc
Q 019722          104 FVSQFHSLNLPLNLLINNAG  123 (336)
Q Consensus       104 ~~~~~~~~~~~id~lv~nAg  123 (336)
                      +++.-     ++|.++...|
T Consensus        77 Ii~~E-----~pd~il~~~G   91 (127)
T d1a9xa3          77 IIEKE-----RPDAVLPTMG   91 (127)
T ss_dssp             HHHHH-----CCSEEECSSS
T ss_pred             HHHHh-----CcCCeEEEee
Confidence            66642     7898886666

>d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Peptidoglycan biosynthesis glycosyltransferase MurG
domain: Peptidoglycan biosynthesis glycosyltransferase MurG
species: Escherichia coli [TaxId: 562]

Probab=85.18  E-value=0.46  Score=39.92  Aligned_cols=33  Identities=15%  Similarity=0.269  Sum_probs=22.6

Q ss_pred             CEEEEeCCCCh--H--HHHHHHHHHHCCCEEEEeeCC
Q 019722           36 VTAIITGATSG--I--GAETARVLAKRGARLVLPARS   68 (336)
Q Consensus        36 k~~lItGgs~g--I--G~aia~~L~~~G~~V~~~~r~   68 (336)
                      |.++|++|++|  +  ..+++++|.++|++|.+++..
T Consensus         1 kkili~~~GtGGHv~~a~al~~~L~~~G~eV~~i~~~   37 (351)
T d1f0ka_           1 KRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTA   37 (351)
T ss_dssp             CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEECT
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHHHHhCCCEEEEEEeC
Confidence            45555554434  2  346889999999999887654

>d2csua3 c.23.4.1 (A:291-453) Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Succinyl-CoA synthetase domains
family: Succinyl-CoA synthetase domains
domain: Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=85.03  E-value=3.5  Score=30.56  Aligned_cols=82  Identities=21%  Similarity=0.130  Sum_probs=51.1

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCC----ceEEEeccCCCHHHHHHHHHHHH
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGS----DIVVLPLDLSSLSSVRNFVSQFH  109 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~----~~~~~~~Dl~~~~~v~~~~~~~~  109 (336)
                      +|+.+.|.+.+||.|--++..+.+.|.++--  -+++    +.++|++..|..    +..-+..+. +.+...++++.+.
T Consensus         2 ~G~rvaiit~sGG~~~l~aD~~~~~Gl~l~~--l~~~----t~~~L~~~lp~~~~~~NPlD~~~~~-~~~~~~~~l~~~~   74 (163)
T d2csua3           2 RGNKVAIMTNAGGPGVLTADELDKRGLKLAT--LEEK----TIEELRSFLPPMAAVKNPVDMIASA-RGEDYYRTAKLLL   74 (163)
T ss_dssp             SSSEEEEEESCHHHHHHHHHHHHTTTCEECC--CCHH----HHHHHHHHSCTTCEESSEEECCTTC-CHHHHHHHHHHHH
T ss_pred             CCCeEEEEECChHHHHHHHHHHHHcCCccCC--CCHH----HHHHHHHhCCCcccCCCcccccCCC-CHHHHHHHHHHHH
Confidence            5788888888999999999999999976533  2333    233333333332    233333332 4566677776665


Q ss_pred             hcCCCccEEEEccc
Q 019722          110 SLNLPLNLLINNAG  123 (336)
Q Consensus       110 ~~~~~id~lv~nAg  123 (336)
                      + .+.+|.++....
T Consensus        75 ~-d~~vd~v~v~~~   87 (163)
T d2csua3          75 Q-DPNVDMLIAICV   87 (163)
T ss_dssp             H-STTCSEEEEEEE
T ss_pred             c-CCCcCEEEEeec
Confidence            5 457887765543

>d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=84.74  E-value=0.24  Score=34.70  Aligned_cols=40  Identities=8%  Similarity=0.054  Sum_probs=32.3

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChH
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLK   70 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~   70 (336)
                      ..+++||+|+|.|+ |--|..+|..|+..+.++++..|+..
T Consensus        27 ~~~f~gK~VlVVG~-g~Sa~dia~~l~~~ak~v~~~~~r~~   66 (107)
T d2gv8a2          27 PELFVGESVLVVGG-ASSANDLVRHLTPVAKHPIYQSLLGG   66 (107)
T ss_dssp             GGGGTTCCEEEECS-SHHHHHHHHHHTTTSCSSEEEECTTC
T ss_pred             hhhcCCCeEEEECC-CCCHHHHHHHHHHhcCEEEEEEecCc
Confidence            34589999999995 47889999999998888877776543

>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Sarcosine oxidase
species: Bacillus sp., strain b0618 [TaxId: 1409]

Probab=84.12  E-value=0.47  Score=38.82  Aligned_cols=30  Identities=27%  Similarity=0.455  Sum_probs=26.5

Q ss_pred             EEEeCCCChHHHHHHHHHHHCCCEEEEeeCC
Q 019722           38 AIITGATSGIGAETARVLAKRGARLVLPARS   68 (336)
Q Consensus        38 ~lItGgs~gIG~aia~~L~~~G~~V~~~~r~   68 (336)
                      |+|.| +|-.|.++|.+|+++|.+|+++.+.
T Consensus         6 vvIIG-aGi~Gls~A~~La~~G~~V~viE~~   35 (281)
T d2gf3a1           6 VIVVG-AGSMGMAAGYQLAKQGVKTLLVDAF   35 (281)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred             EEEEC-cCHHHHHHHHHHHHCCCcEEEEeCC
Confidence            67776 6788999999999999999999875

>d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TehB-like
domain: Putative methyltransferase TehB
species: Salmonella typhimurium [TaxId: 90371]

Probab=83.68  E-value=3.3  Score=31.63  Aligned_cols=77  Identities=12%  Similarity=0.120  Sum_probs=54.5

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcC
Q 019722           33 LSSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLN  112 (336)
Q Consensus        33 l~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  112 (336)
                      +.+..||=.|++.|.   .+..|+++|++|+.++.++..++.+.+...... -.++.+...|+.+...           .
T Consensus        29 ~~~grvLDiGcG~G~---~~~~la~~g~~v~gvD~s~~~l~~a~~~~~~~~-~~~~~~~~~d~~~~~~-----------~   93 (198)
T d2i6ga1          29 VAPGRTLDLGCGNGR---NSLYLAANGYDVTAWDKNPASMANLERIKAAEG-LDNLQTDLVDLNTLTF-----------D   93 (198)
T ss_dssp             SCSCEEEEETCTTSH---HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-CTTEEEEECCTTTCCC-----------C
T ss_pred             CCCCcEEEECCCCCH---HHHHHHHHhhhhccccCcHHHHHHHHHHhhhcc-ccchhhhheecccccc-----------c
Confidence            345678988886554   556888999999999999988877665555432 2457888888765431           1


Q ss_pred             CCccEEEEcccC
Q 019722          113 LPLNLLINNAGK  124 (336)
Q Consensus       113 ~~id~lv~nAg~  124 (336)
                      +..|+++.+.-+
T Consensus        94 ~~fD~I~~~~~~  105 (198)
T d2i6ga1          94 GEYDFILSTVVM  105 (198)
T ss_dssp             CCEEEEEEESCG
T ss_pred             ccccEEEEeeee
Confidence            368999876654

>d1gtma1 c.2.1.7 (A:181-419) Glutamate dehydrogenase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=83.51  E-value=0.96  Score=36.56  Aligned_cols=36  Identities=22%  Similarity=0.313  Sum_probs=30.0

Q ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHH-CCCEEEEee
Q 019722           30 CPNLSSVTAIITGATSGIGAETARVLAK-RGARLVLPA   66 (336)
Q Consensus        30 ~~~l~gk~~lItGgs~gIG~aia~~L~~-~G~~V~~~~   66 (336)
                      ..+++||+++|-| .|.+|.++++.|++ .|++|+.+.
T Consensus        27 ~~~l~g~~v~IqG-fGnVG~~~a~~L~~~~G~kvv~vs   63 (239)
T d1gtma1          27 WDTLKGKTIAIQG-YGNAGYYLAKIMSEDFGMKVVAVS   63 (239)
T ss_dssp             CSCSTTCEEEEEC-CSHHHHHHHHHHHHTTCCEEEEEE
T ss_pred             CCCcCCCEEEEEC-CCHHHHHHHHHHHHhcCcceeecc
Confidence            4569999999998 57799999999986 488887664

>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: N,N-dimethylglycine oxidase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=83.34  E-value=0.52  Score=39.06  Aligned_cols=31  Identities=23%  Similarity=0.353  Sum_probs=26.3

Q ss_pred             EEEeCCCChHHHHHHHHHHHCCC-EEEEeeCCh
Q 019722           38 AIITGATSGIGAETARVLAKRGA-RLVLPARSL   69 (336)
Q Consensus        38 ~lItGgs~gIG~aia~~L~~~G~-~V~~~~r~~   69 (336)
                      |+|.| +|-+|.++|.+|+++|. +|.++.|+.
T Consensus         4 ViIIG-aGi~G~s~A~~La~~G~~~V~liE~~~   35 (305)
T d1pj5a2           4 IVIIG-AGIVGTNLADELVTRGWNNITVLDQGP   35 (305)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCCCEEEECSSC
T ss_pred             EEEEC-cCHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence            67777 56999999999999997 699998763

>d1peya_ c.23.1.1 (A:) Sporulation response regulator Spo0F {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: Sporulation response regulator Spo0F
species: Bacillus subtilis [TaxId: 1423]

Probab=83.02  E-value=5.7  Score=27.64  Aligned_cols=81  Identities=17%  Similarity=0.318  Sum_probs=53.1

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCCC
Q 019722           35 SVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLP  114 (336)
Q Consensus        35 gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  114 (336)
                      +|++||.=-...+-..+.+.|.+.|++|...... ..   ..+.+++.  ...+.++-..+-+.+.+ .+++++++....
T Consensus         1 NkrILvVDD~~~~~~~l~~~L~~~g~~v~~a~~g-~e---al~~~~~~--~~dlillD~~mP~~~G~-el~~~lr~~~~~   73 (119)
T d1peya_           1 NEKILIVDDQSGIRILLNEVFNKEGYQTFQAANG-LQ---ALDIVTKE--RPDLVLLDMKIPGMDGI-EILKRMKVIDEN   73 (119)
T ss_dssp             CCEEEEECSCHHHHHHHHHHHHHTTCEEEEESSH-HH---HHHHHHHH--CCSEEEEESCCTTCCHH-HHHHHHHHHCTT
T ss_pred             CCEEEEEeCCHHHHHHHHHHHHHcCCEEEEeCCH-HH---HHHHHHhC--CCCEEEEeccCCCCCHH-HHHHHHHHhCCC
Confidence            5789999888999999999999999998865433 33   23333443  23566665555555544 455566665556


Q ss_pred             ccEEEEcc
Q 019722          115 LNLLINNA  122 (336)
Q Consensus       115 id~lv~nA  122 (336)
                      +-+++..+
T Consensus        74 ~pvi~lt~   81 (119)
T d1peya_          74 IRVIIMTA   81 (119)
T ss_dssp             CEEEEEES
T ss_pred             CcEEEEec
Confidence            66666654

>d2eyqa5 c.37.1.19 (A:779-989) Transcription-repair coupling factor, TRCF {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Tandem AAA-ATPase domain
domain: Transcription-repair coupling factor, TRCF
species: Escherichia coli [TaxId: 562]

Probab=82.91  E-value=2.7  Score=33.04  Aligned_cols=68  Identities=18%  Similarity=0.227  Sum_probs=56.4

Q ss_pred             HHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCCCccEEEEccc
Q 019722           53 RVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLPLNLLINNAG  123 (336)
Q Consensus        53 ~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~lv~nAg  123 (336)
                      +.=.++|-.|++++.+-+..++..+.+++..|+.++..+...+ +.++.++.+..+.+  +.+|+||+..=
T Consensus        25 ~~El~rGgQvy~V~p~I~~~e~~~~~l~~~~p~~~i~~lHGkm-~~~eke~im~~F~~--g~~~ILv~Ttv   92 (211)
T d2eyqa5          25 LREILRGGQVYYLYNDVENIQKAAERLAELVPEARIAIGHGQM-RERELERVMNDFHH--QRFNVLVCTTI   92 (211)
T ss_dssp             HHHHTTTCEEEEECCCSSCHHHHHHHHHHHCTTSCEEECCSSC-CHHHHHHHHHHHHT--TSCCEEEESST
T ss_pred             HHHHHcCCeEEEEEcCccchhhHHHHHHHhCCceEEEEEEecc-CHHHHHHHHHHHHc--CCcceEEEehh
Confidence            3334578899999988777888888899889999999999999 57888888888876  48999998863

>d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Thermotoga maritima [TaxId: 2336]

Probab=82.89  E-value=0.66  Score=35.71  Aligned_cols=33  Identities=27%  Similarity=0.291  Sum_probs=26.6

Q ss_pred             EEEEeCCCChHHHHHHHHHHHCCC-EEEEeeCCh
Q 019722           37 TAIITGATSGIGAETARVLAKRGA-RLVLPARSL   69 (336)
Q Consensus        37 ~~lItGgs~gIG~aia~~L~~~G~-~V~~~~r~~   69 (336)
                      .|-|.||||-.|..+++.|+++-. ++..+..+.
T Consensus         3 kVaIvGATGyvG~eLirlL~~HP~~ei~~l~s~~   36 (176)
T d1vkna1           3 RAGIIGATGYTGLELVRLLKNHPEAKITYLSSRT   36 (176)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHCTTEEEEEEECST
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCCceEEEeeccc
Confidence            578999999999999999998764 666655443

>d1wg8a2 c.66.1.23 (A:5-108,A:207-284) TM0872, methyltransferase domain {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermus thermophilus [TaxId: 274]

Probab=82.46  E-value=1.8  Score=33.22  Aligned_cols=74  Identities=20%  Similarity=0.221  Sum_probs=48.5

Q ss_pred             CCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCCCccEEEEcc
Q 019722           43 ATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLPLNLLINNA  122 (336)
Q Consensus        43 gs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~lv~nA  122 (336)
                      ||-|-|-+ .+.+++++.+|+.++|+++....+.+ +    ...++.+++.+.++....   +...  ....+|.++..-
T Consensus        25 ~T~G~GGh-s~~iL~~~~~viaiD~D~~ai~~a~~-~----~~~~~~~~~~~f~~~~~~---l~~~--~~~~vdgIl~DL   93 (182)
T d1wg8a2          25 ATLGGAGH-ARGILERGGRVIGLDQDPEAVARAKG-L----HLPGLTVVQGNFRHLKRH---LAAL--GVERVDGILADL   93 (182)
T ss_dssp             TTCTTSHH-HHHHHHTTCEEEEEESCHHHHHHHHH-T----CCTTEEEEESCGGGHHHH---HHHT--TCSCEEEEEEEC
T ss_pred             eCCCCcHH-HHHHhcccCcEEEEhhhhhHHHHHhh-c----cccceeEeehHHHHHHHH---HHHc--CCCccCEEEEEc
Confidence            34333334 45556677799999999987654432 2    145899999888764443   3222  145799999999


Q ss_pred             cCCCC
Q 019722          123 GKFAH  127 (336)
Q Consensus       123 g~~~~  127 (336)
                      |+...
T Consensus        94 GvSs~   98 (182)
T d1wg8a2          94 GVSSF   98 (182)
T ss_dssp             SCCHH
T ss_pred             cCCHH
Confidence            98544

>d2fpoa1 c.66.1.46 (A:10-192) Methylase YhhF {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Methylase YhhF
species: Escherichia coli [TaxId: 562]

Probab=82.28  E-value=4.9  Score=30.45  Aligned_cols=78  Identities=13%  Similarity=0.064  Sum_probs=53.3

Q ss_pred             CCCCEEEEeC-CCChHHHHHHHHHHHCCC-EEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHh
Q 019722           33 LSSVTAIITG-ATSGIGAETARVLAKRGA-RLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHS  110 (336)
Q Consensus        33 l~gk~~lItG-gs~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  110 (336)
                      +.|+++|=.+ |||.+|.    +++.+|+ +|+++..+....+.+.+.+.... ..++.++..|+.         +.+..
T Consensus        42 ~~~~~vLDlfaGsG~~gi----ealsrGa~~v~~VE~~~~a~~~~k~N~~~~~-~~~~~ii~~d~~---------~~l~~  107 (183)
T d2fpoa1          42 IVDAQCLDCFAGSGALGL----EALSRYAAGATLIEMDRAVSQQLIKNLATLK-AGNARVVNSNAM---------SFLAQ  107 (183)
T ss_dssp             HTTCEEEETTCTTCHHHH----HHHHTTCSEEEEECSCHHHHHHHHHHHHHTT-CCSEEEECSCHH---------HHHSS
T ss_pred             cchhhhhhhhccccceee----eEEecCcceeEEEEEeechhhHHHHHHhhcc-ccceeeeeeccc---------ccccc
Confidence            5777777444 4555555    4577898 89999999998888887776543 356788877742         22223


Q ss_pred             cCCCccEEEEcccC
Q 019722          111 LNLPLNLLINNAGK  124 (336)
Q Consensus       111 ~~~~id~lv~nAg~  124 (336)
                      .....|+++.+..+
T Consensus       108 ~~~~fDlIf~DPPY  121 (183)
T d2fpoa1         108 KGTPHNIVFVDPPF  121 (183)
T ss_dssp             CCCCEEEEEECCSS
T ss_pred             cccccCEEEEcCcc
Confidence            34578999988653

>d1nt2a_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=81.85  E-value=1.4  Score=34.74  Aligned_cols=77  Identities=17%  Similarity=0.168  Sum_probs=53.8

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCC
Q 019722           34 SSVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNL  113 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  113 (336)
                      .|.+||=.|+++|.-...+..+...| +|+.++.++..++.+.+..+.   ..++.++..|..++......       +.
T Consensus        56 pg~~VLDlGcG~G~~~~~la~~v~~g-~V~gvDis~~~i~~a~~~a~~---~~ni~~i~~d~~~~~~~~~~-------~~  124 (209)
T d1nt2a_          56 GDERVLYLGAASGTTVSHLADIVDEG-IIYAVEYSAKPFEKLLELVRE---RNNIIPLLFDASKPWKYSGI-------VE  124 (209)
T ss_dssp             SSCEEEEETCTTSHHHHHHHHHTTTS-EEEEECCCHHHHHHHHHHHHH---CSSEEEECSCTTCGGGTTTT-------CC
T ss_pred             CCCEEEEeCCcCCHHHHHHHHhccCC-eEEEEeCCHHHHHHHHHHhhc---cCCceEEEeeccCccccccc-------cc
Confidence            47799999998886554444455445 999999999988877766554   35899999998876553222       23


Q ss_pred             CccEEEEc
Q 019722          114 PLNLLINN  121 (336)
Q Consensus       114 ~id~lv~n  121 (336)
                      .+|+++++
T Consensus       125 ~vd~v~~~  132 (209)
T d1nt2a_         125 KVDLIYQD  132 (209)
T ss_dssp             CEEEEEEC
T ss_pred             eEEEEEec
Confidence            56766654

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=81.82  E-value=1.3  Score=30.18  Aligned_cols=70  Identities=14%  Similarity=0.158  Sum_probs=42.8

Q ss_pred             CCEEEEeCCCChHH-HHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCC
Q 019722           35 SVTAIITGATSGIG-AETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNL  113 (336)
Q Consensus        35 gk~~lItGgs~gIG-~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  113 (336)
                      .|.+.+.| -+|+| .++|+.|.++|+.|...++......+   .+++.  +  +.+...+-.  ..+           .
T Consensus         8 ~~~ihfiG-igG~GMs~LA~~L~~~G~~VsGSD~~~~~~~~---~L~~~--G--i~v~~g~~~--~~i-----------~   66 (96)
T d1p3da1           8 VQQIHFIG-IGGAGMSGIAEILLNEGYQISGSDIADGVVTQ---RLAQA--G--AKIYIGHAE--EHI-----------E   66 (96)
T ss_dssp             CCEEEEET-TTSTTHHHHHHHHHHHTCEEEEEESCCSHHHH---HHHHT--T--CEEEESCCG--GGG-----------T
T ss_pred             CCEEEEEE-ECHHHHHHHHHHHHhCCCEEEEEeCCCChhhh---HHHHC--C--CeEEECCcc--ccC-----------C
Confidence            35566665 34455 55799999999999999987554333   33322  3  333333222  111           2


Q ss_pred             CccEEEEcccCC
Q 019722          114 PLNLLINNAGKF  125 (336)
Q Consensus       114 ~id~lv~nAg~~  125 (336)
                      ..|++|...++.
T Consensus        67 ~~d~vV~S~AI~   78 (96)
T d1p3da1          67 GASVVVVSSAIK   78 (96)
T ss_dssp             TCSEEEECTTSC
T ss_pred             CCCEEEECCCcC
Confidence            579999998874

>d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM1727
species: Thermotoga maritima [TaxId: 2336]

Probab=81.82  E-value=0.17  Score=37.87  Aligned_cols=37  Identities=16%  Similarity=0.045  Sum_probs=26.6

Q ss_pred             CCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHH
Q 019722           43 ATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARL   79 (336)
Q Consensus        43 gs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l   79 (336)
                      |+|-+|+++++.|.+.+..+.+.+|++++++++.++.
T Consensus         6 G~G~mg~~l~~~L~~~~~~~~v~~R~~~~~~~l~~~~   42 (153)
T d2i76a2           6 GTGTLTRFFLECLKDRYEIGYILSRSIDRARNLAEVY   42 (153)
T ss_dssp             SCCHHHHHHHHTTC----CCCEECSSHHHHHHHHHHT
T ss_pred             eCcHHHHHHHHHHHhCCCEEEEEeCChhhhcchhhcc
Confidence            4788999999988664434468899999988877654

>d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Arsenite-translocating ATPase ArsA
species: Escherichia coli [TaxId: 562]

Probab=81.70  E-value=0.49  Score=38.83  Aligned_cols=37  Identities=24%  Similarity=0.249  Sum_probs=31.8

Q ss_pred             CCCEEEEeCCCChHHHHH-----HHHHHHCCCEEEEeeCChH
Q 019722           34 SSVTAIITGATSGIGAET-----ARVLAKRGARLVLPARSLK   70 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~ai-----a~~L~~~G~~V~~~~r~~~   70 (336)
                      .|+.++|+.|=||+|+..     |..|+++|.+|.+++-++.
T Consensus        18 ~~~~iii~sGKGGVGKTT~a~nLA~~lA~~G~rVllvD~Dp~   59 (279)
T d1ihua2          18 NEHGLIMLMGKGGVGKTTMAAAIAVRLADMGFDVHLTTSDPA   59 (279)
T ss_dssp             TSCEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEESCCC
T ss_pred             CCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence            477888888899999987     6789999999999998865

>d2o57a1 c.66.1.18 (A:16-297) Putative sarcosine dimethylglycine methyltransferase {Red algae (Galdieria sulphuraria) [TaxId: 130081]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: Putative sarcosine dimethylglycine methyltransferase
species: Red algae (Galdieria sulphuraria) [TaxId: 130081]

Probab=81.69  E-value=3.3  Score=33.71  Aligned_cols=78  Identities=12%  Similarity=0.082  Sum_probs=55.2

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHC-CCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcC
Q 019722           34 SSVTAIITGATSGIGAETARVLAKR-GARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLN  112 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  112 (336)
                      .|.++|=.|++.|.   ++..|+++ |++|+.++-++.-.+.+.+.........++.++.+|..+...          ..
T Consensus        67 ~~~~vLDiGcG~G~---~~~~la~~~~~~v~gvD~s~~~i~~a~~~~~~~gl~~~v~~~~~d~~~l~~----------~~  133 (282)
T d2o57a1          67 RQAKGLDLGAGYGG---AARFLVRKFGVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIPC----------ED  133 (282)
T ss_dssp             TTCEEEEETCTTSH---HHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCSS----------CT
T ss_pred             CCCEEEEeCCCCcH---HHhhhhccCCcEEEEEeccchhhhhhhcccccccccccccccccccccccc----------cc
Confidence            57789988887663   34445554 789999999988877777666665445689999999865310          12


Q ss_pred             CCccEEEEcccC
Q 019722          113 LPLNLLINNAGK  124 (336)
Q Consensus       113 ~~id~lv~nAg~  124 (336)
                      +.+|+++.+-.+
T Consensus       134 ~sfD~V~~~~~l  145 (282)
T d2o57a1         134 NSYDFIWSQDAF  145 (282)
T ss_dssp             TCEEEEEEESCG
T ss_pred             cccchhhccchh
Confidence            468999876543

>d1r18a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=81.55  E-value=2.2  Score=33.87  Aligned_cols=82  Identities=20%  Similarity=0.176  Sum_probs=58.0

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHH-CC----CEEEEeeCChHHHHHHHHHHHhh----CCCCceEEEeccCCCHHHHHHH
Q 019722           34 SSVTAIITGATSGIGAETARVLAK-RG----ARLVLPARSLKAAEEAKARLASD----CPGSDIVVLPLDLSSLSSVRNF  104 (336)
Q Consensus        34 ~gk~~lItGgs~gIG~aia~~L~~-~G----~~V~~~~r~~~~~~~~~~~l~~~----~~~~~~~~~~~Dl~~~~~v~~~  104 (336)
                      .|..||..|+++|--.++..+++. .|    .+|+.+.++++-.+...+.+...    ..-.++.++..|..+.      
T Consensus        80 ~g~~VLeIGtGsGY~ta~la~l~g~~g~~~~~~V~~iE~~~~l~~~a~~~l~~~~~~~~~~~nv~~~~~d~~~~------  153 (223)
T d1r18a_          80 PGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKG------  153 (223)
T ss_dssp             TTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGGC------
T ss_pred             CCCeEEEecCCCCHHHHHHHHHhhhccCCcccEEEEEecCHHHHHHHHHhhhhcchhhcCccEEEEEecccccc------
Confidence            578999999999988888887764 34    48999999987766655544331    1124789999987531      


Q ss_pred             HHHHHhcCCCccEEEEcccCC
Q 019722          105 VSQFHSLNLPLNLLINNAGKF  125 (336)
Q Consensus       105 ~~~~~~~~~~id~lv~nAg~~  125 (336)
                          ....++.|.++.+++..
T Consensus       154 ----~~~~~~fD~Iiv~~a~~  170 (223)
T d1r18a_         154 ----YPPNAPYNAIHVGAAAP  170 (223)
T ss_dssp             ----CGGGCSEEEEEECSCBS
T ss_pred             ----cccccceeeEEEEeech
Confidence                11235789999988863

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=81.50  E-value=2.7  Score=28.03  Aligned_cols=68  Identities=19%  Similarity=0.149  Sum_probs=42.9

Q ss_pred             EEEeCCCChHHH-HHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCCCcc
Q 019722           38 AIITGATSGIGA-ETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLPLN  116 (336)
Q Consensus        38 ~lItGgs~gIG~-aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id  116 (336)
                      +-+.| -+|+|- ++|+.|.++|+.|...++......   ++|++.  +.++. ..-|..+              ....|
T Consensus         4 ihfiG-IgG~GMs~LA~~L~~~G~~VsGSD~~~~~~t---~~L~~~--Gi~i~-~gh~~~~--------------i~~~d   62 (89)
T d1j6ua1           4 IHFVG-IGGIGMSAVALHEFSNGNDVYGSNIEETERT---AYLRKL--GIPIF-VPHSADN--------------WYDPD   62 (89)
T ss_dssp             EEEET-TTSHHHHHHHHHHHHTTCEEEEECSSCCHHH---HHHHHT--TCCEE-SSCCTTS--------------CCCCS
T ss_pred             EEEEe-ECHHHHHHHHHHHHhCCCeEEEEeCCCChhH---HHHHHC--CCeEE-eeecccc--------------cCCCC
Confidence            44443 567776 679999999999999998865433   334443  43332 1122222              13689


Q ss_pred             EEEEcccCCC
Q 019722          117 LLINNAGKFA  126 (336)
Q Consensus       117 ~lv~nAg~~~  126 (336)
                      ++|...++..
T Consensus        63 ~vV~SsAI~~   72 (89)
T d1j6ua1          63 LVIKTPAVRD   72 (89)
T ss_dssp             EEEECTTCCT
T ss_pred             EEEEecCcCC
Confidence            9999998743

>d1c4oa2 c.37.1.19 (A:410-583) Nucleotide excision repair enzyme UvrB {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Tandem AAA-ATPase domain
domain: Nucleotide excision repair enzyme UvrB
species: Thermus thermophilus [TaxId: 274]

Probab=81.46  E-value=7.6  Score=29.28  Aligned_cols=66  Identities=20%  Similarity=0.208  Sum_probs=53.0

Q ss_pred             HHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCCCccEEEEccc
Q 019722           53 RVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLPLNLLINNAG  123 (336)
Q Consensus        53 ~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~lv~nAg  123 (336)
                      ++..++|-++++++.+...++.+.+.+...  +-++..+..++. ...-.++++.+.+  |.+++||+.--
T Consensus        25 ~~~~~~g~r~lvfc~t~~~~~~l~~~L~~~--Gi~a~~~Hg~~~-~~eR~~~l~~F~~--G~~~vLVaT~v   90 (174)
T d1c4oa2          25 RERAARGERTLVTVLTVRMAEELTSFLVEH--GIRARYLHHELD-AFKRQALIRDLRL--GHYDCLVGINL   90 (174)
T ss_dssp             HHHHHTTCEEEEECSSHHHHHHHHHHHHHT--TCCEEEECTTCC-HHHHHHHHHHHHT--TSCSEEEESCC
T ss_pred             HHHHhcCCcEEEEEcchhHHHHHHHHHHhc--CCceEEEecccc-hHHHHHHHHHHHC--CCeEEEEeeee
Confidence            334467889999999999999999999876  778999999985 5666677777765  58999998754

>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: p-Hydroxybenzoate hydroxylase, PHBH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=81.05  E-value=0.63  Score=38.21  Aligned_cols=33  Identities=27%  Similarity=0.279  Sum_probs=28.5

Q ss_pred             EEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChH
Q 019722           37 TAIITGATSGIGAETARVLAKRGARLVLPARSLK   70 (336)
Q Consensus        37 ~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~   70 (336)
                      .|+|.||+ -.|+.+|..|+++|.+|.++.++++
T Consensus         4 ~V~IvGaG-p~Gl~~A~~L~~~G~~v~vlE~~~~   36 (292)
T d1k0ia1           4 QVAIIGAG-PSGLLLGQLLHKAGIDNVILERQTP   36 (292)
T ss_dssp             SEEEECCS-HHHHHHHHHHHHHTCCEEEECSSCH
T ss_pred             CEEEECcC-HHHHHHHHHHHHCCCCEEEEeCCCC
Confidence            37778754 9999999999999999999998864

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=80.91  E-value=2.2  Score=31.61  Aligned_cols=43  Identities=26%  Similarity=0.397  Sum_probs=31.9

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHC--CCEEEEee--CChHHHHHHHHH
Q 019722           36 VTAIITGATSGIGAETARVLAKR--GARLVLPA--RSLKAAEEAKAR   78 (336)
Q Consensus        36 k~~lItGgs~gIG~aia~~L~~~--G~~V~~~~--r~~~~~~~~~~~   78 (336)
                      |.+.|.|+||-||.....-+.+.  .++|+.+.  +|-+.+.+...+
T Consensus         3 K~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~~N~~~L~~q~~e   49 (150)
T d1r0ka2           3 RTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANRNVKDLADAAKR   49 (150)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESSCHHHHHHHHHH
T ss_pred             cEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEeCCCHHHHHHHHHh
Confidence            78999999999999999888775  46776554  555555544443

>d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus halodurans [TaxId: 86665]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein BH2331
species: Bacillus halodurans [TaxId: 86665]

Probab=80.76  E-value=3.4  Score=32.21  Aligned_cols=77  Identities=9%  Similarity=0.034  Sum_probs=54.5

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEeeCChHHHHHHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHhcCCC
Q 019722           35 SVTAIITGATSGIGAETARVLAKRGARLVLPARSLKAAEEAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHSLNLP  114 (336)
Q Consensus        35 gk~~lItGgs~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~  114 (336)
                      +.++|=.|++.|.-   +..|+++|.+|+.++-++.-++.+.+.+.... ..++.++.+|..+..-          ..+.
T Consensus        16 ~~rVLDiGcG~G~~---~~~l~~~~~~v~gvD~s~~~i~~A~~~~~~~~-~~~i~~~~~d~~~l~~----------~~~~   81 (231)
T d1vl5a_          16 NEEVLDVATGGGHV---ANAFAPFVKKVVAFDLTEDILKVARAFIEGNG-HQQVEYVQGDAEQMPF----------TDER   81 (231)
T ss_dssp             CCEEEEETCTTCHH---HHHHGGGSSEEEEEESCHHHHHHHHHHHHHTT-CCSEEEEECCC-CCCS----------CTTC
T ss_pred             cCEEEEecccCcHH---HHHHHHhCCEEEEEECCHHHHhhhhhcccccc-cccccccccccccccc----------cccc
Confidence            57889899887754   35678889999999999887776655554432 4679999999876420          1246


Q ss_pred             ccEEEEcccCC
Q 019722          115 LNLLINNAGKF  125 (336)
Q Consensus       115 id~lv~nAg~~  125 (336)
                      .|+++++..+.
T Consensus        82 fD~v~~~~~l~   92 (231)
T d1vl5a_          82 FHIVTCRIAAH   92 (231)
T ss_dssp             EEEEEEESCGG
T ss_pred             ccccccccccc
Confidence            89998887653

>d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PF0725
species: Pyrococcus furiosus [TaxId: 2261]

Probab=80.68  E-value=7.1  Score=27.18  Aligned_cols=84  Identities=12%  Similarity=0.108  Sum_probs=50.6

Q ss_pred             CEEEEeCCC---ChHHHHHHHHHHHCCCEEEEeeCChHHHH--HHHHHHHhhCCCCceEEEeccCCCHHHHHHHHHHHHh
Q 019722           36 VTAIITGAT---SGIGAETARVLAKRGARLVLPARSLKAAE--EAKARLASDCPGSDIVVLPLDLSSLSSVRNFVSQFHS  110 (336)
Q Consensus        36 k~~lItGgs---~gIG~aia~~L~~~G~~V~~~~r~~~~~~--~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  110 (336)
                      |++.|.|+|   +-.|..+.+.|.+.|++|+.+..+.+...  .....+...-....+.++   ...++.+..+++++.+
T Consensus         2 KsIAVvGaS~~~~k~g~~v~~~L~~~g~~V~pVnP~~~~i~G~~~y~sl~~lp~~~D~vvi---~vp~~~~~~~l~~~~~   78 (116)
T d1y81a1           2 RKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNYDEIEGLKCYRSVRELPKDVDVIVF---VVPPKVGLQVAKEAVE   78 (116)
T ss_dssp             CEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEETTEECBSSGGGSCTTCCEEEE---CSCHHHHHHHHHHHHH
T ss_pred             cEEEEEcccCCCCCcHHHHHHHHHHCCCEEEEEccccccccCccccccchhccccceEEEE---EeCHHHHHHHHHHHHh
Confidence            788999998   56899999999999999888764432110  011111111001122222   2456777777877766


Q ss_pred             cCCCccEEEEcccC
Q 019722          111 LNLPLNLLINNAGK  124 (336)
Q Consensus       111 ~~~~id~lv~nAg~  124 (336)
                      .  ++..++...|.
T Consensus        79 ~--g~k~v~~~~g~   90 (116)
T d1y81a1          79 A--GFKKLWFQPGA   90 (116)
T ss_dssp             T--TCCEEEECTTS
T ss_pred             c--CCceEEeccch
Confidence            5  46667666654

>d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Dethiobiotin synthetase
species: Escherichia coli [TaxId: 562]

Probab=80.33  E-value=0.46  Score=37.16  Aligned_cols=31  Identities=16%  Similarity=0.175  Sum_probs=26.2

Q ss_pred             CEEEEeCCCChHHHH-----HHHHHHHCCCEEEEee
Q 019722           36 VTAIITGATSGIGAE-----TARVLAKRGARLVLPA   66 (336)
Q Consensus        36 k~~lItGgs~gIG~a-----ia~~L~~~G~~V~~~~   66 (336)
                      |.++|||-++|+|+.     ++..|+++|++|.+++
T Consensus         2 ~~~~i~gt~~GVGKTtvs~~La~aLa~~G~rVl~id   37 (224)
T d1byia_           2 KRYFVTGTDTEVGKTVASCALLQAAKAAGYRTAGYK   37 (224)
T ss_dssp             EEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred             ceEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEEC
Confidence            788999988899986     4567889999999975

>d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=80.19  E-value=1.1  Score=33.51  Aligned_cols=34  Identities=24%  Similarity=0.398  Sum_probs=26.6

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCC---EEEEeeCC
Q 019722           35 SVTAIITGATSGIGAETARVLAKRGA---RLVLPARS   68 (336)
Q Consensus        35 gk~~lItGgs~gIG~aia~~L~~~G~---~V~~~~r~   68 (336)
                      |-.|.|.||||..|.++++.|.++.+   ++..++.+
T Consensus         1 g~kVaIvGATGyvG~eLirlL~~H~fp~~~l~~~~s~   37 (154)
T d2gz1a1           1 GYTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASA   37 (154)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHTCCSCEEEEEEEECG
T ss_pred             CCEEEEECCCcHHHHHHHHHHHcCCCCceEEEEeccc
Confidence            44689999999999999999998864   44445443