Citrus Sinensis ID: 019795
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 335 | 2.2.26 [Sep-21-2011] | |||||||
| Q42605 | 351 | UDP-glucose 4-epimerase 1 | yes | no | 0.985 | 0.940 | 0.750 | 1e-155 | |
| Q43070 | 350 | UDP-glucose 4-epimerase O | N/A | no | 0.994 | 0.951 | 0.729 | 1e-151 | |
| O65780 | 354 | UDP-glucose 4-epimerase G | N/A | no | 0.994 | 0.940 | 0.692 | 1e-143 | |
| O65781 | 350 | UDP-glucose 4-epimerase G | N/A | no | 0.976 | 0.934 | 0.628 | 1e-126 | |
| Q9SN58 | 351 | UDP-glucose 4-epimerase 2 | no | no | 0.979 | 0.934 | 0.609 | 1e-124 | |
| Q9T0A7 | 350 | UDP-glucose 4-epimerase 3 | no | no | 0.961 | 0.92 | 0.611 | 1e-121 | |
| P55180 | 339 | UDP-glucose 4-epimerase O | yes | no | 0.961 | 0.949 | 0.548 | 1e-107 | |
| Q553X7 | 344 | UDP-glucose 4-epimerase O | yes | no | 0.967 | 0.941 | 0.505 | 1e-100 | |
| Q8R059 | 347 | UDP-glucose 4-epimerase O | yes | no | 0.961 | 0.927 | 0.514 | 2e-98 | |
| Q5R8D0 | 348 | UDP-glucose 4-epimerase O | yes | no | 0.970 | 0.933 | 0.512 | 2e-97 |
| >sp|Q42605|GALE1_ARATH UDP-glucose 4-epimerase 1 OS=Arabidopsis thaliana GN=At1g12780 PE=1 SV=2 | Back alignment and function desciption |
|---|
Score = 547 bits (1410), Expect = e-155, Method: Compositional matrix adjust.
Identities = 259/345 (75%), Positives = 292/345 (84%), Gaps = 15/345 (4%)
Query: 4 EKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFH 63
E+NILVTGGAGFIGTH +QLL+ GFKV +IDN NSV EAVDRV++L GP+L+KKL+F+
Sbjct: 6 EQNILVTGGAGFIGTHTVVQLLKDGFKVSIIDNFDNSVIEAVDRVRELVGPDLSKKLDFN 65
Query: 64 VGDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYN 123
+GDLRNK D++KLFS Q+F+AVIHF LKAV ESV++P RYFDNNL+GTINLY+ MAKYN
Sbjct: 66 LGDLRNKGDIEKLFSKQRFDAVIHFAGLKAVGESVENPRRYFDNNLVGTINLYETMAKYN 125
Query: 124 CKKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKADPEWRIILLR 183
CK +VFSSSAT+YGQPEKIPC+EDF AMNPYGRTK + EEIA D+QKA+PEWRIILLR
Sbjct: 126 CKMMVFSSSATVYGQPEKIPCMEDFELKAMNPYGRTKLFLEEIARDIQKAEPEWRIILLR 185
Query: 184 YFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAVRDYIHV 243
YFNPVGAHESG +GEDPKGIPNNLMPYIQQVAVGR PELNVYG DYPT+DGSAVRDYIHV
Sbjct: 186 YFNPVGAHESGSIGEDPKGIPNNLMPYIQQVAVGRLPELNVYGHDYPTEDGSAVRDYIHV 245
Query: 244 MDLAD---------------GCIAYNLGNGKGISVLEMVAAFEKASGKKIPIKFCPRRVG 288
MDLAD GC AYNLG G+G SVLEMVAAFEKASGKKIPIK CPRR G
Sbjct: 246 MDLADGHIAALRKLFADPKIGCTAYNLGTGQGTSVLEMVAAFEKASGKKIPIKLCPRRSG 305
Query: 289 DATAVYAATDKAHKELGWKPKYGIEDMCAHQWNWAKNNPMGYQTK 333
DATAVYA+T+KA KELGWK KYG+++MC QW WA NNP GYQ K
Sbjct: 306 DATAVYASTEKAEKELGWKAKYGVDEMCRDQWKWANNNPWGYQNK 350
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Arabidopsis thaliana (taxid: 3702) EC: 5EC: .EC: 1EC: .EC: 3EC: .EC: 2 |
| >sp|Q43070|GALE1_PEA UDP-glucose 4-epimerase OS=Pisum sativum GN=GALE PE=2 SV=1 | Back alignment and function description |
|---|
Score = 535 bits (1379), Expect = e-151, Method: Compositional matrix adjust.
Identities = 254/348 (72%), Positives = 286/348 (82%), Gaps = 15/348 (4%)
Query: 1 MASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKL 60
+AS + ILVTG AGFIGTH +QLL GF V +IDN NSV EAV+RV+++ G L++ L
Sbjct: 2 VASSQKILVTGSAGFIGTHTVVQLLNNGFNVSIIDNFDNSVMEAVERVREVVGSNLSQNL 61
Query: 61 EFHVGDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMA 120
EF +GDLRNKDDL+KLFS KF+AVIHF LKAV ESV++P RYFDNNL+GTINLY+ MA
Sbjct: 62 EFTLGDLRNKDDLEKLFSKSKFDAVIHFAGLKAVGESVENPRRYFDNNLVGTINLYEVMA 121
Query: 121 KYNCKKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKADPEWRII 180
K+NCKK+VFSSSAT+YGQPEKIPCVEDF AMNPYGRTK + EEIA D+QKA+PEWRI+
Sbjct: 122 KHNCKKMVFSSSATVYGQPEKIPCVEDFKLQAMNPYGRTKLFLEEIARDIQKAEPEWRIV 181
Query: 181 LLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAVRDY 240
LLRYFNPVGAHESGKLGEDP+GIPNNLMPYIQQVAVGR PELNVYG DYPT+DGSA+RDY
Sbjct: 182 LLRYFNPVGAHESGKLGEDPRGIPNNLMPYIQQVAVGRLPELNVYGHDYPTRDGSAIRDY 241
Query: 241 IHVMDLAD---------------GCIAYNLGNGKGISVLEMVAAFEKASGKKIPIKFCPR 285
IHVMDLAD GC AYNLG G+G SVLEMVAAFEKASGKKI +K CPR
Sbjct: 242 IHVMDLADGHIAALRKLFTSENIGCTAYNLGTGRGSSVLEMVAAFEKASGKKIALKLCPR 301
Query: 286 RVGDATAVYAATDKAHKELGWKPKYGIEDMCAHQWNWAKNNPMGYQTK 333
R GDAT VYA+T KA KELGWK KYG+E+MC QWNWAKNNP GY K
Sbjct: 302 RPGDATEVYASTAKAEKELGWKAKYGVEEMCRDQWNWAKNNPWGYSGK 349
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Pisum sativum (taxid: 3888) EC: 5 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
| >sp|O65780|GALE1_CYATE UDP-glucose 4-epimerase GEPI42 OS=Cyamopsis tetragonoloba PE=2 SV=1 | Back alignment and function description |
|---|
Score = 507 bits (1306), Expect = e-143, Method: Compositional matrix adjust.
Identities = 241/348 (69%), Positives = 278/348 (79%), Gaps = 15/348 (4%)
Query: 1 MASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKL 60
MAS + ILVTGGAGFIG+H +QLL+ GF V +IDNL+NSV +AV RV+ L GP L+ L
Sbjct: 6 MASGETILVTGGAGFIGSHTVVQLLKQGFHVSIIDNLYNSVIDAVHRVRLLVGPLLSSNL 65
Query: 61 EFHVGDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMA 120
FH GDLRN DLD LFS KF+AVIHF LK V ESV +P Y+DNNL+ TINL+Q M+
Sbjct: 66 HFHHGDLRNIHDLDILFSKTKFDAVIHFAGLKGVGESVLNPSNYYDNNLVATINLFQVMS 125
Query: 121 KYNCKKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKADPEWRII 180
K+NCKKLV SSSAT+YGQP++IPCVED AMNPYGR+K + EE+A D+Q+A+ EWRII
Sbjct: 126 KFNCKKLVISSSATVYGQPDQIPCVEDSNLHAMNPYGRSKLFVEEVARDIQRAEAEWRII 185
Query: 181 LLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAVRDY 240
LLRYFNPVGAHESG++GEDP+G+PNNLMPYIQQVAV R PELN+YG DYPTKDG+A+RDY
Sbjct: 186 LLRYFNPVGAHESGQIGEDPRGLPNNLMPYIQQVAVARLPELNIYGHDYPTKDGTAIRDY 245
Query: 241 IHVMDLAD---------------GCIAYNLGNGKGISVLEMVAAFEKASGKKIPIKFCPR 285
IHVMDLAD GC AYNLG G+G SVLEMVAAFEKASGKKIPIK CPR
Sbjct: 246 IHVMDLADGHIAALRKLFTTDNIGCTAYNLGTGRGTSVLEMVAAFEKASGKKIPIKMCPR 305
Query: 286 RVGDATAVYAATDKAHKELGWKPKYGIEDMCAHQWNWAKNNPMGYQTK 333
R GDATAVYA+T+KA KELGWK KYG+E+MC QW WA NNP GYQ K
Sbjct: 306 RPGDATAVYASTEKAEKELGWKAKYGVEEMCRDQWKWASNNPWGYQGK 353
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Cyamopsis tetragonoloba (taxid: 3832) EC: 5 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
| >sp|O65781|GALE2_CYATE UDP-glucose 4-epimerase GEPI48 OS=Cyamopsis tetragonoloba PE=2 SV=1 | Back alignment and function description |
|---|
Score = 451 bits (1159), Expect = e-126, Method: Compositional matrix adjust.
Identities = 215/342 (62%), Positives = 257/342 (75%), Gaps = 15/342 (4%)
Query: 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEF 62
S + +LVTGGAG+IG+H LQLL GGFK V++DNL NS A+ RVK+LAG + A L F
Sbjct: 2 SSQTVLVTGGAGYIGSHTVLQLLLGGFKAVVVDNLDNSSETAIHRVKELAG-KFAGNLSF 60
Query: 63 HVGDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKY 122
H DLR++D L+K+FSS KF++VIHF LKAV ESVQ P Y+DNNLIGTI L++ MA +
Sbjct: 61 HKLDLRDRDALEKIFSSTKFDSVIHFAGLKAVGESVQKPLLYYDNNLIGTIVLFEVMAAH 120
Query: 123 NCKKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKADPEWRIILL 182
CKKLVFSSSAT+YG P+++PC E+FP A NPYGRTK EEI D+ +A+ EW+IILL
Sbjct: 121 GCKKLVFSSSATVYGLPKEVPCTEEFPLSAANPYGRTKLIIEEICRDIYRAEQEWKIILL 180
Query: 183 RYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAVRDYIH 242
RYFNPVGAH SG +GEDP+GIPNNLMP++QQVAVGR P L V+G DY T DG+ VRDYIH
Sbjct: 181 RYFNPVGAHPSGYIGEDPRGIPNNLMPFVQQVAVGRRPALTVFGNDYTTSDGTGVRDYIH 240
Query: 243 VMDLAD--------------GCIAYNLGNGKGISVLEMVAAFEKASGKKIPIKFCPRRVG 288
V+DLAD GC YNLG GKG SVLEMV AFE+ASGKKIP+ RR G
Sbjct: 241 VVDLADGHIAALRKLNDPKIGCEVYNLGTGKGTSVLEMVKAFEQASGKKIPLVMAGRRPG 300
Query: 289 DATAVYAATDKAHKELGWKPKYGIEDMCAHQWNWAKNNPMGY 330
DA VYA+T+KA +EL WK KYGI++MC QWNWA NP GY
Sbjct: 301 DAEVVYASTNKAERELNWKAKYGIDEMCRDQWNWASKNPYGY 342
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Cyamopsis tetragonoloba (taxid: 3832) EC: 5 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
| >sp|Q9SN58|GALE2_ARATH UDP-glucose 4-epimerase 2 OS=Arabidopsis thaliana GN=At4g10960 PE=2 SV=3 | Back alignment and function description |
|---|
Score = 444 bits (1141), Expect = e-124, Method: Compositional matrix adjust.
Identities = 209/343 (60%), Positives = 255/343 (74%), Gaps = 15/343 (4%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHV 64
+N+LV+GGAG+IG+H LQLL GG+ VV++DNL NS ++ RVK LA E ++L FH
Sbjct: 4 RNVLVSGGAGYIGSHTVLQLLLGGYSVVVVDNLDNSSAVSLQRVKKLAA-EHGERLSFHQ 62
Query: 65 GDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNC 124
DLR++ L+K+FS KF+AVIHF LKAV ESV+ P Y++NNL+GTI L + MA++ C
Sbjct: 63 VDLRDRSALEKIFSETKFDAVIHFAGLKAVGESVEKPLLYYNNNLVGTITLLEVMAQHGC 122
Query: 125 KKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKADPEWRIILLRY 184
K LVFSSSAT+YG P+++PC E+FP A+NPYGRTK + EEI DV +DPEW+IILLRY
Sbjct: 123 KNLVFSSSATVYGSPKEVPCTEEFPISALNPYGRTKLFIEEICRDVYGSDPEWKIILLRY 182
Query: 185 FNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAVRDYIHVM 244
FNPVGAH SG +GEDP+GIPNNLMP++QQVAVGR P L V+G DY TKDG+ VRDYIHV+
Sbjct: 183 FNPVGAHPSGDIGEDPRGIPNNLMPFVQQVAVGRRPHLTVFGNDYNTKDGTGVRDYIHVI 242
Query: 245 DLAD--------------GCIAYNLGNGKGISVLEMVAAFEKASGKKIPIKFCPRRVGDA 290
DLAD GC YNLG G G SVLEMV AFEKASGKKIP+ RR GDA
Sbjct: 243 DLADGHIAALRKLEDCKIGCEVYNLGTGNGTSVLEMVDAFEKASGKKIPLVIAGRRPGDA 302
Query: 291 TAVYAATDKAHKELGWKPKYGIEDMCAHQWNWAKNNPMGYQTK 333
VYA+T++A EL WK KYGIE+MC WNWA NNP GY +
Sbjct: 303 EVVYASTERAESELNWKAKYGIEEMCRDLWNWASNNPYGYDSS 345
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Arabidopsis thaliana (taxid: 3702) EC: 5 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
| >sp|Q9T0A7|GALE3_ARATH UDP-glucose 4-epimerase 3 OS=Arabidopsis thaliana GN=At4g23920 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 434 bits (1116), Expect = e-121, Method: Compositional matrix adjust.
Identities = 206/337 (61%), Positives = 249/337 (73%), Gaps = 15/337 (4%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHV 64
K++LVTGGAG+IG+H LQLL+GG+ V++DN NS ++ RVK LAG E +L FH
Sbjct: 3 KSVLVTGGAGYIGSHTVLQLLEGGYSAVVVDNYDNSSAASLQRVKKLAG-ENGNRLSFHQ 61
Query: 65 GDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNC 124
DLR++ L+K+FS KF+AVIHF LKAV ESV+ P Y++NN++GT+ L + MA+Y C
Sbjct: 62 VDLRDRPALEKIFSETKFDAVIHFAGLKAVGESVEKPLLYYNNNIVGTVTLLEVMAQYGC 121
Query: 125 KKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKADPEWRIILLRY 184
K LVFSSSAT+YG P+++PC E+ P A NPYGRTK + EEI DV ++D EW+IILLRY
Sbjct: 122 KNLVFSSSATVYGWPKEVPCTEESPISATNPYGRTKLFIEEICRDVHRSDSEWKIILLRY 181
Query: 185 FNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAVRDYIHVM 244
FNPVGAH SG +GEDP G+PNNLMPY+QQVAVGR P L V+G DY TKDG+ VRDYIHVM
Sbjct: 182 FNPVGAHPSGYIGEDPLGVPNNLMPYVQQVAVGRRPHLTVFGTDYKTKDGTGVRDYIHVM 241
Query: 245 DLADG--------------CIAYNLGNGKGISVLEMVAAFEKASGKKIPIKFCPRRVGDA 290
DLADG C YNLG G G SVLEMVAAFEKASGKKIP+ RR GDA
Sbjct: 242 DLADGHIAALRKLDDLKISCEVYNLGTGNGTSVLEMVAAFEKASGKKIPLVMAGRRPGDA 301
Query: 291 TAVYAATDKAHKELGWKPKYGIEDMCAHQWNWAKNNP 327
VYA+T+KA +EL WK K GIE+MC WNWA NNP
Sbjct: 302 EVVYASTEKAERELNWKAKNGIEEMCRDLWNWASNNP 338
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Arabidopsis thaliana (taxid: 3702) EC: 5 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
| >sp|P55180|GALE_BACSU UDP-glucose 4-epimerase OS=Bacillus subtilis (strain 168) GN=galE PE=3 SV=1 | Back alignment and function description |
|---|
Score = 389 bits (1000), Expect = e-107, Method: Compositional matrix adjust.
Identities = 186/339 (54%), Positives = 238/339 (70%), Gaps = 17/339 (5%)
Query: 7 ILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGD 66
ILVTGGAG+IG+H ++LL G+++V++DNL NS EA++RVK++ G K L F+ D
Sbjct: 3 ILVTGGAGYIGSHTCVELLNSGYEIVVLDNLSNSSAEALNRVKEITG----KDLTFYEAD 58
Query: 67 LRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKK 126
L +++ +D +F+ + EAVIHF LKAV ESV P +Y+ NNL GT L +AM KY KK
Sbjct: 59 LLDREAVDSVFAENEIEAVIHFAGLKAVGESVAIPLKYYHNNLTGTFILCEAMEKYGVKK 118
Query: 127 LVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKADPEWRIILLRYFN 186
+VFSSSAT+YG PE P EDFP GA NPYG+TK E+I D+ AD EW + LLRYFN
Sbjct: 119 IVFSSSATVYGVPETSPITEDFPLGATNPYGQTKLMLEQILRDLHTADNEWSVALLRYFN 178
Query: 187 PVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAVRDYIHVMDL 246
P GAH SG++GEDP GIPNNLMPY+ QVAVG+ +L+V+G DYPTKDG+ VRDYIHV+DL
Sbjct: 179 PFGAHPSGRIGEDPNGIPNNLMPYVAQVAVGKLEQLSVFGNDYPTKDGTGVRDYIHVVDL 238
Query: 247 ADGCI-------------AYNLGNGKGISVLEMVAAFEKASGKKIPIKFCPRRVGDATAV 293
A+G + AYNLG G G SVLEMV AFEK SGK++P +F RR GD
Sbjct: 239 AEGHVKALEKVLNSTGADAYNLGTGTGYSVLEMVKAFEKVSGKEVPYRFADRRPGDIATC 298
Query: 294 YAATDKAHKELGWKPKYGIEDMCAHQWNWAKNNPMGYQT 332
+A KA +ELGW+ K G+E+MCA W W +N GY++
Sbjct: 299 FADPAKAKRELGWEAKRGLEEMCADSWRWQSSNVNGYKS 337
|
Bacillus subtilis (strain 168) (taxid: 224308) EC: 5 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
| >sp|Q553X7|GALE_DICDI UDP-glucose 4-epimerase OS=Dictyostelium discoideum GN=galE PE=1 SV=1 | Back alignment and function description |
|---|
Score = 366 bits (939), Expect = e-100, Method: Compositional matrix adjust.
Identities = 173/342 (50%), Positives = 228/342 (66%), Gaps = 18/342 (5%)
Query: 4 EKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFH 63
+ I+VTGGAG+IG+H ++L++ G+ V++DNL NS EA+ RV+ + G K++EFH
Sbjct: 5 DDRIMVTGGAGYIGSHTVIELIEAGYTPVIVDNLSNSSLEAIKRVESITG----KEIEFH 60
Query: 64 VGDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYN 123
D+ N+ LD++F + +VIHF LKAV ES + P +Y++NN+ GT+ L M K+
Sbjct: 61 HVDIMNEKALDEIFETGNIRSVIHFAGLKAVGESNKLPLKYYNNNIAGTLTLLNLMDKHR 120
Query: 124 CKKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKADPEWRIILLR 183
KKLVFSSSAT+YG P +P EDFP A NPYGRTK + E I D+ +DPEW I+LR
Sbjct: 121 VKKLVFSSSATVYGDPHTVPITEDFPLSATNPYGRTKLYVEGILQDLCASDPEWNCIMLR 180
Query: 184 YFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAVRDYIHV 243
YFNPVGAH SG +GEDPK IPNNLMPY+ Q A+G+ P L+++G DY T DG+ VRD+IHV
Sbjct: 181 YFNPVGAHPSGLIGEDPKDIPNNLMPYVTQTAIGKRPILSIFGNDYNTPDGTGVRDFIHV 240
Query: 244 MDLA--------------DGCIAYNLGNGKGISVLEMVAAFEKASGKKIPIKFCPRRVGD 289
+DLA GC+AYNLG G+G SVLEMV A ++AS K+IP + RR GD
Sbjct: 241 VDLAKGHISALSSLHSKKQGCVAYNLGTGRGYSVLEMVGALKQASHKEIPYQIVSRRKGD 300
Query: 290 ATAVYAATDKAHKELGWKPKYGIEDMCAHQWNWAKNNPMGYQ 331
+ +A KA KELGWK + +DMC W W NP GY
Sbjct: 301 VASSFADPSKALKELGWKATHNQDDMCRDAWKWQSLNPNGYS 342
|
Catalyzes two distinct but analogous reactions: the epimerization of UDP-glucose to UDP-galactose and the epimerization of UDP-N-acetylglucosamine to UDP-N-acetylgalactosamine. Dictyostelium discoideum (taxid: 44689) EC: 5 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
| >sp|Q8R059|GALE_MOUSE UDP-glucose 4-epimerase OS=Mus musculus GN=Gale PE=2 SV=1 | Back alignment and function description |
|---|
Score = 359 bits (921), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 178/346 (51%), Positives = 225/346 (65%), Gaps = 24/346 (6%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHN------SVPEAVDRVKDLAGPELAK 58
+ +LVTGGAG+IG+H L+LL+ G+ V+IDN HN S+PE++ RV++L G +
Sbjct: 2 EKVLVTGGAGYIGSHTVLELLEAGYSPVVIDNFHNAIRGEDSMPESLRRVQELTG----R 57
Query: 59 KLEFHVGDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQA 118
+EF D+ ++ L LF F+AVIHF LKAV ESVQ P Y+ NL GTI L +
Sbjct: 58 SVEFEEMDILDQAALQHLFKKHSFKAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEI 117
Query: 119 MAKYNCKKLVFSSSATIYGQPEKIPCVEDFPYGA-MNPYGRTKQWCEEIAFDVQKADPEW 177
M + K LVFSSSAT+YG P+ +P E P G NPYG++K + EE+ D+ +AD W
Sbjct: 118 MRAHGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCRADTAW 177
Query: 178 RIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAV 237
+LLRYFNP+GAH SG++GEDP+GIPNNLMPY+ QVA+GR LNV+G DY T+DG+ V
Sbjct: 178 NAVLLRYFNPIGAHASGRIGEDPQGIPNNLMPYVSQVAIGRREALNVFGDDYATEDGTGV 237
Query: 238 RDYIHVMDLAD-------------GCIAYNLGNGKGISVLEMVAAFEKASGKKIPIKFCP 284
RDYIHV+DLA GC YNLG G G SVL+MV A EKASGKKIP K
Sbjct: 238 RDYIHVVDLAKGHIAALKKLKEQCGCRTYNLGTGTGYSVLQMVQAMEKASGKKIPYKVVA 297
Query: 285 RRVGDATAVYAATDKAHKELGWKPKYGIEDMCAHQWNWAKNNPMGY 330
RR GD A YA AH+ELGW G++ MC W W K NP G+
Sbjct: 298 RREGDVAACYANPSLAHEELGWTAALGLDRMCEDLWRWQKQNPSGF 343
|
Catalyzes two distinct but analogous reactions: the epimerization of UDP-glucose to UDP-galactose and the epimerization of UDP-N-acetylglucosamine to UDP-N-acetylgalactosamine. Mus musculus (taxid: 10090) EC: 5 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
| >sp|Q5R8D0|GALE_PONAB UDP-glucose 4-epimerase OS=Pongo abelii GN=GALE PE=2 SV=1 | Back alignment and function description |
|---|
Score = 355 bits (911), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 179/349 (51%), Positives = 225/349 (64%), Gaps = 24/349 (6%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHN------SVPEAVDRVKDLAGPELAK 58
+ +LVTGGAG+IG+H L+LL+ G+ V+IDN HN S+PE++ RV++L G +
Sbjct: 3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTG----R 58
Query: 59 KLEFHVGDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQA 118
+EF D+ ++ L +LF F AVIHF LKAV ESVQ P Y+ NL GTI L +
Sbjct: 59 SVEFEEMDILDQGALQRLFKKHSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEI 118
Query: 119 MAKYNCKKLVFSSSATIYGQPEKIPCVEDFPYGA-MNPYGRTKQWCEEIAFDVQKADPEW 177
M + K LVFSSSAT+YG P+ +P E P G NPYG++K + EE+ D+ +AD W
Sbjct: 119 MKAHGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQADKTW 178
Query: 178 RIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAV 237
+LLRYFNP GAH SG +GEDP+GIPNNLMPY+ QVA+GR LNV+G DY T+DG+ V
Sbjct: 179 NAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGV 238
Query: 238 RDYIHVMDLAD-------------GCIAYNLGNGKGISVLEMVAAFEKASGKKIPIKFCP 284
RDYIHV+DLA GC YNLG G G SVL+MV A EKASGKKIP K
Sbjct: 239 RDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGKKIPYKVVA 298
Query: 285 RRVGDATAVYAATDKAHKELGWKPKYGIEDMCAHQWNWAKNNPMGYQTK 333
RR GD A YA AH+ELGW G++ MC W W K NP G+ T+
Sbjct: 299 RREGDVAACYANPSLAHEELGWTAALGLDRMCEDLWRWQKQNPSGFGTQ 347
|
Catalyzes two distinct but analogous reactions: the epimerization of UDP-glucose to UDP-galactose and the epimerization of UDP-N-acetylglucosamine to UDP-N-acetylgalactosamine. Pongo abelii (taxid: 9601) EC: 5 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 335 | ||||||
| 224074891 | 350 | predicted protein [Populus trichocarpa] | 0.982 | 0.94 | 0.764 | 1e-154 | |
| 297849662 | 351 | UDP-D-glucose/UDP-D-galactose 4-epimeras | 0.985 | 0.940 | 0.750 | 1e-153 | |
| 15222072 | 351 | UDP-D-glucose/UDP-D-galactose 4-epimeras | 0.985 | 0.940 | 0.750 | 1e-153 | |
| 1143392 | 351 | uridine diphosphate glucose epimerase [A | 0.985 | 0.940 | 0.747 | 1e-152 | |
| 139001604 | 350 | UDP-galactose [Malus x domestica] | 0.985 | 0.942 | 0.742 | 1e-151 | |
| 356527995 | 350 | PREDICTED: UDP-glucose 4-epimerase-like | 0.994 | 0.951 | 0.729 | 1e-151 | |
| 33186647 | 351 | UDP-Glc-4-epimerase [Solanum tuberosum] | 0.985 | 0.940 | 0.739 | 1e-150 | |
| 229365688 | 350 | UDP-glucose 4-epimerase [Pisum sativum] | 0.994 | 0.951 | 0.732 | 1e-150 | |
| 225426811 | 350 | PREDICTED: UDP-glucose 4-epimerase [Viti | 0.985 | 0.942 | 0.744 | 1e-150 | |
| 11386762 | 350 | RecName: Full=UDP-glucose 4-epimerase; A | 0.994 | 0.951 | 0.729 | 1e-150 |
| >gi|224074891|ref|XP_002304478.1| predicted protein [Populus trichocarpa] gi|222841910|gb|EEE79457.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 549 bits (1414), Expect = e-154, Method: Compositional matrix adjust.
Identities = 263/344 (76%), Positives = 290/344 (84%), Gaps = 15/344 (4%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHV 64
+ ILVTGGAGFIGTH +QLL+ GFKV +IDNL NSV EAVDRVK++ GP+L+K LEF++
Sbjct: 4 QTILVTGGAGFIGTHTVVQLLKEGFKVSIIDNLDNSVTEAVDRVKEVVGPQLSKNLEFNL 63
Query: 65 GDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNC 124
GDLRNKDDL+KLFS KF+AVIHF LKAV ESV +P RYFDNNL+GTINLY+ MAKYNC
Sbjct: 64 GDLRNKDDLEKLFSRTKFDAVIHFAGLKAVGESVANPRRYFDNNLVGTINLYEVMAKYNC 123
Query: 125 KKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKADPEWRIILLRY 184
KK+VFSSSAT+YGQPEKIPCVEDF AMNPYGRTK + EEIA D+QKA+PEW IILLRY
Sbjct: 124 KKMVFSSSATVYGQPEKIPCVEDFNLMAMNPYGRTKLFLEEIARDIQKAEPEWSIILLRY 183
Query: 185 FNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAVRDYIHVM 244
FNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGR PELNVYG DYPTKDGSAVRDYIHVM
Sbjct: 184 FNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRLPELNVYGHDYPTKDGSAVRDYIHVM 243
Query: 245 DLAD---------------GCIAYNLGNGKGISVLEMVAAFEKASGKKIPIKFCPRRVGD 289
DLAD GCIAYNLG G G SVLEMV AFEKASGKKIP+K CPRR GD
Sbjct: 244 DLADGHVAALRKISTSKDIGCIAYNLGTGCGTSVLEMVTAFEKASGKKIPVKLCPRRPGD 303
Query: 290 ATAVYAATDKAHKELGWKPKYGIEDMCAHQWNWAKNNPMGYQTK 333
ATAVYA+T+KA +ELGWK KYG+E+MC QW WA NNP GYQ+K
Sbjct: 304 ATAVYASTEKAERELGWKAKYGVEEMCRDQWKWASNNPWGYQSK 347
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297849662|ref|XP_002892712.1| UDP-D-glucose/UDP-D-galactose 4-epimerase 1 [Arabidopsis lyrata subsp. lyrata] gi|297338554|gb|EFH68971.1| UDP-D-glucose/UDP-D-galactose 4-epimerase 1 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 548 bits (1413), Expect = e-153, Method: Compositional matrix adjust.
Identities = 259/345 (75%), Positives = 292/345 (84%), Gaps = 15/345 (4%)
Query: 4 EKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFH 63
E+NILVTGGAGFIGTH +QLL+ GFKV +IDNL NSV EAVDRV++L GP+L+KKL+F+
Sbjct: 6 EQNILVTGGAGFIGTHTVVQLLKDGFKVSIIDNLDNSVIEAVDRVRELVGPDLSKKLDFN 65
Query: 64 VGDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYN 123
+GDLRNK D++KLFS Q+F+AVIHF LKAV ESV +P RYFDNNL+GTINLY+ MAKYN
Sbjct: 66 LGDLRNKGDIEKLFSKQRFDAVIHFAGLKAVGESVGNPRRYFDNNLVGTINLYETMAKYN 125
Query: 124 CKKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKADPEWRIILLR 183
CK +VFSSSAT+YGQPE IPC+EDF AMNPYGRTK + EEIA D+Q+A+PEWRI+LLR
Sbjct: 126 CKTMVFSSSATVYGQPETIPCMEDFELKAMNPYGRTKLFLEEIARDIQRAEPEWRIVLLR 185
Query: 184 YFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAVRDYIHV 243
YFNPVGAHESG +GEDPKGIPNNLMPYIQQVAVGR PELNVYG DYPTKDGSAVRDYIHV
Sbjct: 186 YFNPVGAHESGSIGEDPKGIPNNLMPYIQQVAVGRLPELNVYGHDYPTKDGSAVRDYIHV 245
Query: 244 MDLAD---------------GCIAYNLGNGKGISVLEMVAAFEKASGKKIPIKFCPRRVG 288
MDLAD GC AYNLG G+G SVLEMVAAFEKASGKKIPIK CPRR G
Sbjct: 246 MDLADGHIAALRKLFADPKIGCTAYNLGTGQGTSVLEMVAAFEKASGKKIPIKLCPRRSG 305
Query: 289 DATAVYAATDKAHKELGWKPKYGIEDMCAHQWNWAKNNPMGYQTK 333
DATAVYA+T+KA KELGWK KYG+++MC QWNWA NNP GYQ K
Sbjct: 306 DATAVYASTEKAEKELGWKAKYGVDEMCRDQWNWANNNPWGYQKK 350
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|15222072|ref|NP_172738.1| UDP-D-glucose/UDP-D-galactose 4-epimerase 1 [Arabidopsis thaliana] gi|12643760|sp|Q42605.2|GALE1_ARATH RecName: Full=UDP-glucose 4-epimerase 1; AltName: Full=Galactowaldenase 1; AltName: Full=UDP-galactose 4-epimerase 1 gi|8698725|gb|AAF78483.1|AC012187_3 Strong similarity to UDPglucose 4-epimerase from Arabidopsis thaliana gi|2129759 and is a member of the NAD dependent Epimerase/Dehydratase PF|01370 family. ESTs gb|AI100184, gb|T22969, gb|T22968, gb|H76416, gb|AI998807 come from this gene [Arabidopsis thaliana] gi|12248021|gb|AAG50102.1|AF334724_1 putative uridine diphosphate glucose epimerase [Arabidopsis thaliana] gi|15809880|gb|AAL06868.1| At1g12780/F13K23_21 [Arabidopsis thaliana] gi|21539429|gb|AAM53267.1| uridine diphosphate glucose epimerase [Arabidopsis thaliana] gi|23197648|gb|AAN15351.1| uridine diphosphate glucose epimerase [Arabidopsis thaliana] gi|332190807|gb|AEE28928.1| UDP-D-glucose/UDP-D-galactose 4-epimerase 1 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 547 bits (1410), Expect = e-153, Method: Compositional matrix adjust.
Identities = 259/345 (75%), Positives = 292/345 (84%), Gaps = 15/345 (4%)
Query: 4 EKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFH 63
E+NILVTGGAGFIGTH +QLL+ GFKV +IDN NSV EAVDRV++L GP+L+KKL+F+
Sbjct: 6 EQNILVTGGAGFIGTHTVVQLLKDGFKVSIIDNFDNSVIEAVDRVRELVGPDLSKKLDFN 65
Query: 64 VGDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYN 123
+GDLRNK D++KLFS Q+F+AVIHF LKAV ESV++P RYFDNNL+GTINLY+ MAKYN
Sbjct: 66 LGDLRNKGDIEKLFSKQRFDAVIHFAGLKAVGESVENPRRYFDNNLVGTINLYETMAKYN 125
Query: 124 CKKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKADPEWRIILLR 183
CK +VFSSSAT+YGQPEKIPC+EDF AMNPYGRTK + EEIA D+QKA+PEWRIILLR
Sbjct: 126 CKMMVFSSSATVYGQPEKIPCMEDFELKAMNPYGRTKLFLEEIARDIQKAEPEWRIILLR 185
Query: 184 YFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAVRDYIHV 243
YFNPVGAHESG +GEDPKGIPNNLMPYIQQVAVGR PELNVYG DYPT+DGSAVRDYIHV
Sbjct: 186 YFNPVGAHESGSIGEDPKGIPNNLMPYIQQVAVGRLPELNVYGHDYPTEDGSAVRDYIHV 245
Query: 244 MDLAD---------------GCIAYNLGNGKGISVLEMVAAFEKASGKKIPIKFCPRRVG 288
MDLAD GC AYNLG G+G SVLEMVAAFEKASGKKIPIK CPRR G
Sbjct: 246 MDLADGHIAALRKLFADPKIGCTAYNLGTGQGTSVLEMVAAFEKASGKKIPIKLCPRRSG 305
Query: 289 DATAVYAATDKAHKELGWKPKYGIEDMCAHQWNWAKNNPMGYQTK 333
DATAVYA+T+KA KELGWK KYG+++MC QW WA NNP GYQ K
Sbjct: 306 DATAVYASTEKAEKELGWKAKYGVDEMCRDQWKWANNNPWGYQNK 350
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|1143392|emb|CAA90941.1| uridine diphosphate glucose epimerase [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 542 bits (1397), Expect = e-152, Method: Compositional matrix adjust.
Identities = 258/345 (74%), Positives = 290/345 (84%), Gaps = 15/345 (4%)
Query: 4 EKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFH 63
E+NILVTGGAGFIGTH +QLL+ GFKV +IDN NSV EAVDRV++L GP+L+KKL+F+
Sbjct: 6 EQNILVTGGAGFIGTHTVVQLLKDGFKVSIIDNFDNSVIEAVDRVRELVGPDLSKKLDFN 65
Query: 64 VGDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYN 123
+GDLRNK D++KLFS Q+F+AVIHF LKAV ESV+ RYFDNNL+GTINLY+ MAKYN
Sbjct: 66 LGDLRNKGDIEKLFSKQRFDAVIHFAGLKAVGESVEKGRRYFDNNLVGTINLYETMAKYN 125
Query: 124 CKKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKADPEWRIILLR 183
CK +VFSSSAT+YGQPEKIPC+EDF AMNPYGRTK + EEIA D+QKA+PEWRIILLR
Sbjct: 126 CKMMVFSSSATVYGQPEKIPCMEDFELKAMNPYGRTKLFLEEIARDIQKAEPEWRIILLR 185
Query: 184 YFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAVRDYIHV 243
YFNPVGAHESG +GEDPKGIPNNLMPYIQQVAVGR PELNVYG DYPT+DGSAVRDYIHV
Sbjct: 186 YFNPVGAHESGSIGEDPKGIPNNLMPYIQQVAVGRLPELNVYGHDYPTEDGSAVRDYIHV 245
Query: 244 MDLAD---------------GCIAYNLGNGKGISVLEMVAAFEKASGKKIPIKFCPRRVG 288
MDLAD GC AYNLG G+G SVLEMVAAFEKASGKKIPIK CPRR G
Sbjct: 246 MDLADGHIAALRKLFADPKIGCTAYNLGTGQGTSVLEMVAAFEKASGKKIPIKLCPRRSG 305
Query: 289 DATAVYAATDKAHKELGWKPKYGIEDMCAHQWNWAKNNPMGYQTK 333
DATAVYA+T+KA KELGWK KYG+++MC QW WA NNP GYQ K
Sbjct: 306 DATAVYASTEKAEKELGWKAKYGVDEMCRDQWKWAFNNPWGYQNK 350
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|139001604|dbj|BAF51705.1| UDP-galactose [Malus x domestica] | Back alignment and taxonomy information |
|---|
Score = 542 bits (1396), Expect = e-151, Method: Compositional matrix adjust.
Identities = 256/345 (74%), Positives = 288/345 (83%), Gaps = 15/345 (4%)
Query: 4 EKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFH 63
E+ ILVTGGAGFIG+H +QLL+ GF+V +IDNL NSV EAVDRV+DL GP+L++KL F
Sbjct: 5 EQTILVTGGAGFIGSHTVVQLLEAGFRVSVIDNLDNSVAEAVDRVRDLVGPKLSQKLHFQ 64
Query: 64 VGDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYN 123
+GDLRNKDDL+KLFS KF+AVIHF LKAV ESV HP RY+DNNL+GTINLY MAKYN
Sbjct: 65 LGDLRNKDDLEKLFSQTKFDAVIHFAGLKAVGESVAHPHRYYDNNLVGTINLYAVMAKYN 124
Query: 124 CKKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKADPEWRIILLR 183
CKK+VFSSSAT+YGQPEKIPCVEDF A+NPYGRTK + EEIA D+ ADP+W+IILLR
Sbjct: 125 CKKMVFSSSATVYGQPEKIPCVEDFNLVALNPYGRTKLFLEEIARDMHNADPDWQIILLR 184
Query: 184 YFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAVRDYIHV 243
YFNPVGAHESGK+GEDPKGIPNNLMPYIQQVAVGR PELNVYG DYPTKDG+A+RDYIHV
Sbjct: 185 YFNPVGAHESGKIGEDPKGIPNNLMPYIQQVAVGRLPELNVYGHDYPTKDGTAIRDYIHV 244
Query: 244 MDLAD---------------GCIAYNLGNGKGISVLEMVAAFEKASGKKIPIKFCPRRVG 288
MDLAD GC AYNLG G+G SVLEMVA FEKASGKKIPIK CPRR G
Sbjct: 245 MDLADGHIAALQKLFTTENIGCAAYNLGTGQGTSVLEMVAGFEKASGKKIPIKLCPRRSG 304
Query: 289 DATAVYAATDKAHKELGWKPKYGIEDMCAHQWNWAKNNPMGYQTK 333
DATAVYA+T+KA +ELGWK KYGIE+MC QW WA NNP GY++K
Sbjct: 305 DATAVYASTEKAERELGWKAKYGIEEMCRDQWKWAVNNPHGYKSK 349
|
Source: Malus x domestica Species: Malus x domestica Genus: Malus Family: Rosaceae Order: Rosales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356527995|ref|XP_003532591.1| PREDICTED: UDP-glucose 4-epimerase-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 538 bits (1387), Expect = e-151, Method: Compositional matrix adjust.
Identities = 254/348 (72%), Positives = 285/348 (81%), Gaps = 15/348 (4%)
Query: 1 MASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKL 60
+ S + ILVTGGAGFIGTH +QLL+GGF V +IDN NSV EAVDRV+ + GP+L++ L
Sbjct: 2 VTSSQKILVTGGAGFIGTHTVVQLLKGGFSVSIIDNFDNSVVEAVDRVRQVVGPQLSQNL 61
Query: 61 EFHVGDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMA 120
EF GDLRN+DDL+KLFS F+AVIHF LKAVAESV P RYFD NL+GTINLYQ MA
Sbjct: 62 EFTQGDLRNRDDLEKLFSRTTFDAVIHFAGLKAVAESVSKPRRYFDFNLVGTINLYQVMA 121
Query: 121 KYNCKKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKADPEWRII 180
KYNC+K+VFSSSAT+YGQPEKIPC EDF AMNPYGRTK + EEIA D+QKA+PEW+II
Sbjct: 122 KYNCRKMVFSSSATVYGQPEKIPCEEDFRLQAMNPYGRTKLFLEEIARDIQKAEPEWKII 181
Query: 181 LLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAVRDY 240
LLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGR PELNVYG DYPT+DGSA+RDY
Sbjct: 182 LLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRLPELNVYGHDYPTRDGSAIRDY 241
Query: 241 IHVMDLAD---------------GCIAYNLGNGKGISVLEMVAAFEKASGKKIPIKFCPR 285
IHVMDLAD GC AYNLG G+G SVLEMV AFEKASGKKIP+K CPR
Sbjct: 242 IHVMDLADGHIAALRKLFTTENIGCTAYNLGTGRGTSVLEMVTAFEKASGKKIPVKLCPR 301
Query: 286 RVGDATAVYAATDKAHKELGWKPKYGIEDMCAHQWNWAKNNPMGYQTK 333
R GDAT VYA+T++A KELGWK KYG+++MC QWNWAKNNP GY K
Sbjct: 302 RPGDATEVYASTERAEKELGWKAKYGVDEMCRDQWNWAKNNPQGYTGK 349
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|33186647|gb|AAP97493.1| UDP-Glc-4-epimerase [Solanum tuberosum] | Back alignment and taxonomy information |
|---|
Score = 538 bits (1386), Expect = e-150, Method: Compositional matrix adjust.
Identities = 255/345 (73%), Positives = 286/345 (82%), Gaps = 15/345 (4%)
Query: 4 EKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFH 63
++NILVTGGAGFIGTH +QLL GFKV +IDN HNSV EAVDRV++L GP+L++ LEFH
Sbjct: 6 QENILVTGGAGFIGTHTVVQLLNEGFKVTIIDNFHNSVEEAVDRVRELVGPQLSQNLEFH 65
Query: 64 VGDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYN 123
+GD+RNKDDL+KLFS ++F AV+HF LKAV ESV PF YF+NNLIG+I LY MAKYN
Sbjct: 66 LGDIRNKDDLEKLFSKKEFAAVVHFAGLKAVGESVVQPFLYFENNLIGSITLYSVMAKYN 125
Query: 124 CKKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKADPEWRIILLR 183
CKKLVFSSSAT+YGQPEK+PCVEDF AMNPYGRTK + E+IA D+QKAD EW IILLR
Sbjct: 126 CKKLVFSSSATVYGQPEKVPCVEDFELKAMNPYGRTKLFLEDIARDIQKADQEWNIILLR 185
Query: 184 YFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAVRDYIHV 243
YFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGR PELNVYG DYPT DG+A+RDYIHV
Sbjct: 186 YFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRLPELNVYGNDYPTPDGTAIRDYIHV 245
Query: 244 MDLAD---------------GCIAYNLGNGKGISVLEMVAAFEKASGKKIPIKFCPRRVG 288
MDLAD GC+AYNLG GKG SVLEMVAAFE+ASGKKIP+K CPRR G
Sbjct: 246 MDLADGHVVALQRLLRQNHLGCVAYNLGTGKGKSVLEMVAAFERASGKKIPLKMCPRRPG 305
Query: 289 DATAVYAATDKAHKELGWKPKYGIEDMCAHQWNWAKNNPMGYQTK 333
DATAVYA+T+KA KELGWK KYGI +MC QW WA NP GYQ+K
Sbjct: 306 DATAVYASTEKAEKELGWKAKYGINEMCRDQWKWASQNPWGYQSK 350
|
Source: Solanum tuberosum Species: Solanum tuberosum Genus: Solanum Family: Solanaceae Order: Solanales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|229365688|dbj|BAG09236.2| UDP-glucose 4-epimerase [Pisum sativum] | Back alignment and taxonomy information |
|---|
Score = 537 bits (1384), Expect = e-150, Method: Compositional matrix adjust.
Identities = 255/348 (73%), Positives = 287/348 (82%), Gaps = 15/348 (4%)
Query: 1 MASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKL 60
+AS + ILVTGGAGFIGTH +QLL GF V +IDN NSV EAV+RV+++ G L++ L
Sbjct: 2 VASSQKILVTGGAGFIGTHTVVQLLNNGFNVSIIDNFDNSVMEAVERVREVVGSNLSQNL 61
Query: 61 EFHVGDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMA 120
EF +GDLRNKDDL+KLFS KF+AVIHF LKAV ESV++P RYFDNNL+GTINLY+ MA
Sbjct: 62 EFTLGDLRNKDDLEKLFSKSKFDAVIHFAGLKAVGESVENPRRYFDNNLVGTINLYEVMA 121
Query: 121 KYNCKKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKADPEWRII 180
K+NCKK+VFSSSAT+YGQPEKIPCVEDF AMNPYGRTK + EEIA D+QKA+PEWRI+
Sbjct: 122 KHNCKKMVFSSSATVYGQPEKIPCVEDFKLQAMNPYGRTKLFLEEIARDIQKAEPEWRIV 181
Query: 181 LLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAVRDY 240
LLRYFNPVGAHESGKLGEDP+GIPNNLMPYIQQVAVGR PELNVYG DYPT+DGSA+RDY
Sbjct: 182 LLRYFNPVGAHESGKLGEDPRGIPNNLMPYIQQVAVGRLPELNVYGHDYPTRDGSAIRDY 241
Query: 241 IHVMDLAD---------------GCIAYNLGNGKGISVLEMVAAFEKASGKKIPIKFCPR 285
IHVMDLAD GC AYNLG G+G SVLEMVAAFEKASGKKI +K CPR
Sbjct: 242 IHVMDLADGHIAALRKLFTSENIGCTAYNLGTGRGSSVLEMVAAFEKASGKKIALKLCPR 301
Query: 286 RVGDATAVYAATDKAHKELGWKPKYGIEDMCAHQWNWAKNNPMGYQTK 333
R GDAT VYA+T KA KELGWK KYG+E+MC QWNWAKNNP GY K
Sbjct: 302 RPGDATEVYASTAKAEKELGWKAKYGVEEMCRDQWNWAKNNPWGYSGK 349
|
Source: Pisum sativum Species: Pisum sativum Genus: Pisum Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225426811|ref|XP_002283103.1| PREDICTED: UDP-glucose 4-epimerase [Vitis vinifera] gi|297742582|emb|CBI34731.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 537 bits (1383), Expect = e-150, Method: Compositional matrix adjust.
Identities = 257/345 (74%), Positives = 287/345 (83%), Gaps = 15/345 (4%)
Query: 4 EKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFH 63
++ ILVTGGAGFIGTH +QLL GF V +IDNL NSV EA++RV+DL G EL++KL F+
Sbjct: 5 DRTILVTGGAGFIGTHTVVQLLSEGFTVWIIDNLDNSVLEAIERVRDLVGAELSRKLHFN 64
Query: 64 VGDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYN 123
+GDLRNK DL+KLFS KF+AVIHF LKAV ESV +P RYFDNNLIGTINLY+ MAKYN
Sbjct: 65 LGDLRNKADLEKLFSQTKFDAVIHFAGLKAVGESVVNPRRYFDNNLIGTINLYEIMAKYN 124
Query: 124 CKKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKADPEWRIILLR 183
CKK+VFSSSAT+YGQP+KIPCVEDF AMNPYGRTK + EEIA D+QKA+P+W+IILLR
Sbjct: 125 CKKMVFSSSATVYGQPDKIPCVEDFNLMAMNPYGRTKLFLEEIARDIQKAEPDWKIILLR 184
Query: 184 YFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAVRDYIHV 243
YFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGR PELNVYG DYPT+DGSA+RDYIHV
Sbjct: 185 YFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRLPELNVYGHDYPTRDGSAIRDYIHV 244
Query: 244 MDLAD---------------GCIAYNLGNGKGISVLEMVAAFEKASGKKIPIKFCPRRVG 288
MDLAD GC AYNLG G+G SVLEMVAAFEKASGKKIPIK CPRR G
Sbjct: 245 MDLADGHIAALRKLFTSEDIGCTAYNLGTGQGTSVLEMVAAFEKASGKKIPIKLCPRRAG 304
Query: 289 DATAVYAATDKAHKELGWKPKYGIEDMCAHQWNWAKNNPMGYQTK 333
DATAVYA+T+KA KELGWK KYGI +MC QW WA NNP GY +K
Sbjct: 305 DATAVYASTEKAAKELGWKAKYGIAEMCRDQWKWASNNPWGYHSK 349
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|11386762|sp|Q43070.1|GALE1_PEA RecName: Full=UDP-glucose 4-epimerase; AltName: Full=Galactowaldenase; AltName: Full=UDP-galactose 4-epimerase gi|1173555|gb|AAA86532.1| UDP-galactose-4-epimerase [Pisum sativum] | Back alignment and taxonomy information |
|---|
Score = 535 bits (1379), Expect = e-150, Method: Compositional matrix adjust.
Identities = 254/348 (72%), Positives = 286/348 (82%), Gaps = 15/348 (4%)
Query: 1 MASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKL 60
+AS + ILVTG AGFIGTH +QLL GF V +IDN NSV EAV+RV+++ G L++ L
Sbjct: 2 VASSQKILVTGSAGFIGTHTVVQLLNNGFNVSIIDNFDNSVMEAVERVREVVGSNLSQNL 61
Query: 61 EFHVGDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMA 120
EF +GDLRNKDDL+KLFS KF+AVIHF LKAV ESV++P RYFDNNL+GTINLY+ MA
Sbjct: 62 EFTLGDLRNKDDLEKLFSKSKFDAVIHFAGLKAVGESVENPRRYFDNNLVGTINLYEVMA 121
Query: 121 KYNCKKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKADPEWRII 180
K+NCKK+VFSSSAT+YGQPEKIPCVEDF AMNPYGRTK + EEIA D+QKA+PEWRI+
Sbjct: 122 KHNCKKMVFSSSATVYGQPEKIPCVEDFKLQAMNPYGRTKLFLEEIARDIQKAEPEWRIV 181
Query: 181 LLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAVRDY 240
LLRYFNPVGAHESGKLGEDP+GIPNNLMPYIQQVAVGR PELNVYG DYPT+DGSA+RDY
Sbjct: 182 LLRYFNPVGAHESGKLGEDPRGIPNNLMPYIQQVAVGRLPELNVYGHDYPTRDGSAIRDY 241
Query: 241 IHVMDLAD---------------GCIAYNLGNGKGISVLEMVAAFEKASGKKIPIKFCPR 285
IHVMDLAD GC AYNLG G+G SVLEMVAAFEKASGKKI +K CPR
Sbjct: 242 IHVMDLADGHIAALRKLFTSENIGCTAYNLGTGRGSSVLEMVAAFEKASGKKIALKLCPR 301
Query: 286 RVGDATAVYAATDKAHKELGWKPKYGIEDMCAHQWNWAKNNPMGYQTK 333
R GDAT VYA+T KA KELGWK KYG+E+MC QWNWAKNNP GY K
Sbjct: 302 RPGDATEVYASTAKAEKELGWKAKYGVEEMCRDQWNWAKNNPWGYSGK 349
|
Source: Pisum sativum Species: Pisum sativum Genus: Pisum Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 335 | ||||||
| TAIR|locus:2010371 | 351 | UGE1 "UDP-D-glucose/UDP-D-gala | 0.985 | 0.940 | 0.750 | 4.3e-141 | |
| TAIR|locus:2015253 | 351 | UGE3 "UDP-D-glucose/UDP-D-gala | 0.985 | 0.940 | 0.727 | 1.5e-136 | |
| TAIR|locus:2123466 | 351 | UGE5 "UDP-D-glucose/UDP-D-gala | 0.976 | 0.931 | 0.611 | 1.1e-112 | |
| TAIR|locus:2138121 | 350 | UGE2 "UDP-D-glucose/UDP-D-gala | 0.976 | 0.934 | 0.608 | 7.6e-112 | |
| TAIR|locus:2014235 | 348 | RHD1 "ROOT HAIR DEFECTIVE 1" [ | 0.967 | 0.931 | 0.613 | 1e-109 | |
| TIGR_CMR|BA_5700 | 338 | BA_5700 "UDP-glucose 4-epimera | 0.958 | 0.949 | 0.529 | 3.3e-95 | |
| TIGR_CMR|SO_1664 | 337 | SO_1664 "UDP-glucose 4-epimera | 0.958 | 0.952 | 0.529 | 1e-91 | |
| DICTYBASE|DDB_G0275295 | 344 | galE "UDP-glucose 4-epimerase" | 0.964 | 0.938 | 0.507 | 1.3e-91 | |
| UNIPROTKB|Q4QRB0 | 348 | Gale "Gale protein" [Rattus no | 0.964 | 0.928 | 0.518 | 6.5e-90 | |
| UNIPROTKB|Q9KLH0 | 338 | VC_A0774 "UDP-glucose 4-epimer | 0.955 | 0.946 | 0.525 | 1.1e-89 |
| TAIR|locus:2010371 UGE1 "UDP-D-glucose/UDP-D-galactose 4-epimerase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1380 (490.8 bits), Expect = 4.3e-141, P = 4.3e-141
Identities = 259/345 (75%), Positives = 292/345 (84%)
Query: 4 EKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFH 63
E+NILVTGGAGFIGTH +QLL+ GFKV +IDN NSV EAVDRV++L GP+L+KKL+F+
Sbjct: 6 EQNILVTGGAGFIGTHTVVQLLKDGFKVSIIDNFDNSVIEAVDRVRELVGPDLSKKLDFN 65
Query: 64 VGDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYN 123
+GDLRNK D++KLFS Q+F+AVIHF LKAV ESV++P RYFDNNL+GTINLY+ MAKYN
Sbjct: 66 LGDLRNKGDIEKLFSKQRFDAVIHFAGLKAVGESVENPRRYFDNNLVGTINLYETMAKYN 125
Query: 124 CKKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKADPEWRIILLR 183
CK +VFSSSAT+YGQPEKIPC+EDF AMNPYGRTK + EEIA D+QKA+PEWRIILLR
Sbjct: 126 CKMMVFSSSATVYGQPEKIPCMEDFELKAMNPYGRTKLFLEEIARDIQKAEPEWRIILLR 185
Query: 184 YFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAVRDYIHV 243
YFNPVGAHESG +GEDPKGIPNNLMPYIQQVAVGR PELNVYG DYPT+DGSAVRDYIHV
Sbjct: 186 YFNPVGAHESGSIGEDPKGIPNNLMPYIQQVAVGRLPELNVYGHDYPTEDGSAVRDYIHV 245
Query: 244 MDLADG---------------CIAYNLGNGKGISVLEMVAAFEKASGKKIPIKFCPRRVG 288
MDLADG C AYNLG G+G SVLEMVAAFEKASGKKIPIK CPRR G
Sbjct: 246 MDLADGHIAALRKLFADPKIGCTAYNLGTGQGTSVLEMVAAFEKASGKKIPIKLCPRRSG 305
Query: 289 DATAVYAATDKAHKELGWKPKYGIEDMCAHQWNWAKNNPMGYQTK 333
DATAVYA+T+KA KELGWK KYG+++MC QW WA NNP GYQ K
Sbjct: 306 DATAVYASTEKAEKELGWKAKYGVDEMCRDQWKWANNNPWGYQNK 350
|
|
| TAIR|locus:2015253 UGE3 "UDP-D-glucose/UDP-D-galactose 4-epimerase 3" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1337 (475.7 bits), Expect = 1.5e-136, P = 1.5e-136
Identities = 251/345 (72%), Positives = 286/345 (82%)
Query: 4 EKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFH 63
E+NILVTGGAGFIGTH +QLL GFKV +IDNL NSV EAV RV++L GP+L+ KLEF+
Sbjct: 6 EQNILVTGGAGFIGTHTVVQLLNQGFKVTIIDNLDNSVVEAVHRVRELVGPDLSTKLEFN 65
Query: 64 VGDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYN 123
+GDLRNK D++KLFS+Q+F+AVIHF LKAV ESV +P RYFDNNL+GTINLY+ MAKYN
Sbjct: 66 LGDLRNKGDIEKLFSNQRFDAVIHFAGLKAVGESVGNPRRYFDNNLVGTINLYETMAKYN 125
Query: 124 CKKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKADPEWRIILLR 183
CK +VFSSSAT+YGQPE +PCVEDF AMNPYGRTK + EEIA D+ A+PEW+IILLR
Sbjct: 126 CKMMVFSSSATVYGQPEIVPCVEDFELQAMNPYGRTKLFLEEIARDIHAAEPEWKIILLR 185
Query: 184 YFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAVRDYIHV 243
YFNPVGAHESG++GEDPKGIPNNLMPYIQQVAVGR PELNV+G DYPT DGSAVRDYIHV
Sbjct: 186 YFNPVGAHESGRIGEDPKGIPNNLMPYIQQVAVGRLPELNVFGHDYPTMDGSAVRDYIHV 245
Query: 244 MDLADG---------------CIAYNLGNGKGISVLEMVAAFEKASGKKIPIKFCPRRVG 288
MDLADG C AYNLG G+G SVLEMV++FEKASGKKIPIK CPRR G
Sbjct: 246 MDLADGHVAALNKLFSDSKIGCTAYNLGTGQGTSVLEMVSSFEKASGKKIPIKLCPRRAG 305
Query: 289 DATAVYAATDKAHKELGWKPKYGIEDMCAHQWNWAKNNPMGYQTK 333
DATAVYA+T KA KELGWK KYG+++MC QWNWA NP G+Q K
Sbjct: 306 DATAVYASTQKAEKELGWKAKYGVDEMCRDQWNWANKNPWGFQKK 350
|
|
| TAIR|locus:2123466 UGE5 "UDP-D-glucose/UDP-D-galactose 4-epimerase 5" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1112 (396.5 bits), Expect = 1.1e-112, P = 1.1e-112
Identities = 209/342 (61%), Positives = 255/342 (74%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHV 64
+N+LV+GGAG+IG+H LQLL GG+ VV++DNL NS ++ RVK LA E ++L FH
Sbjct: 4 RNVLVSGGAGYIGSHTVLQLLLGGYSVVVVDNLDNSSAVSLQRVKKLAA-EHGERLSFHQ 62
Query: 65 GDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNC 124
DLR++ L+K+FS KF+AVIHF LKAV ESV+ P Y++NNL+GTI L + MA++ C
Sbjct: 63 VDLRDRSALEKIFSETKFDAVIHFAGLKAVGESVEKPLLYYNNNLVGTITLLEVMAQHGC 122
Query: 125 KKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKADPEWRIILLRY 184
K LVFSSSAT+YG P+++PC E+FP A+NPYGRTK + EEI DV +DPEW+IILLRY
Sbjct: 123 KNLVFSSSATVYGSPKEVPCTEEFPISALNPYGRTKLFIEEICRDVYGSDPEWKIILLRY 182
Query: 185 FNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAVRDYIHVM 244
FNPVGAH SG +GEDP+GIPNNLMP++QQVAVGR P L V+G DY TKDG+ VRDYIHV+
Sbjct: 183 FNPVGAHPSGDIGEDPRGIPNNLMPFVQQVAVGRRPHLTVFGNDYNTKDGTGVRDYIHVI 242
Query: 245 DLADG--------------CIAYNLGNGKGISVLEMVAAFEKASGKKIPIKFCPRRVGDA 290
DLADG C YNLG G G SVLEMV AFEKASGKKIP+ RR GDA
Sbjct: 243 DLADGHIAALRKLEDCKIGCEVYNLGTGNGTSVLEMVDAFEKASGKKIPLVIAGRRPGDA 302
Query: 291 TAVYAATDKAHKELGWKPKYGIEDMCAHQWNWAKNNPMGYQT 332
VYA+T++A EL WK KYGIE+MC WNWA NNP GY +
Sbjct: 303 EVVYASTERAESELNWKAKYGIEEMCRDLWNWASNNPYGYDS 344
|
|
| TAIR|locus:2138121 UGE2 "UDP-D-glucose/UDP-D-galactose 4-epimerase 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1104 (393.7 bits), Expect = 7.6e-112, P = 7.6e-112
Identities = 208/342 (60%), Positives = 252/342 (73%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHV 64
K++LVTGGAG+IG+H LQLL+GG+ V++DN NS ++ RVK LAG E +L FH
Sbjct: 3 KSVLVTGGAGYIGSHTVLQLLEGGYSAVVVDNYDNSSAASLQRVKKLAG-ENGNRLSFHQ 61
Query: 65 GDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNC 124
DLR++ L+K+FS KF+AVIHF LKAV ESV+ P Y++NN++GT+ L + MA+Y C
Sbjct: 62 VDLRDRPALEKIFSETKFDAVIHFAGLKAVGESVEKPLLYYNNNIVGTVTLLEVMAQYGC 121
Query: 125 KKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKADPEWRIILLRY 184
K LVFSSSAT+YG P+++PC E+ P A NPYGRTK + EEI DV ++D EW+IILLRY
Sbjct: 122 KNLVFSSSATVYGWPKEVPCTEESPISATNPYGRTKLFIEEICRDVHRSDSEWKIILLRY 181
Query: 185 FNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAVRDYIHVM 244
FNPVGAH SG +GEDP G+PNNLMPY+QQVAVGR P L V+G DY TKDG+ VRDYIHVM
Sbjct: 182 FNPVGAHPSGYIGEDPLGVPNNLMPYVQQVAVGRRPHLTVFGTDYKTKDGTGVRDYIHVM 241
Query: 245 DLADG--------------CIAYNLGNGKGISVLEMVAAFEKASGKKIPIKFCPRRVGDA 290
DLADG C YNLG G G SVLEMVAAFEKASGKKIP+ RR GDA
Sbjct: 242 DLADGHIAALRKLDDLKISCEVYNLGTGNGTSVLEMVAAFEKASGKKIPLVMAGRRPGDA 301
Query: 291 TAVYAATDKAHKELGWKPKYGIEDMCAHQWNWAKNNPMGYQT 332
VYA+T+KA +EL WK K GIE+MC WNWA NNP GY +
Sbjct: 302 EVVYASTEKAERELNWKAKNGIEEMCRDLWNWASNNPYGYNS 343
|
|
| TAIR|locus:2014235 RHD1 "ROOT HAIR DEFECTIVE 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1084 (386.6 bits), Expect = 1.0e-109, P = 1.0e-109
Identities = 208/339 (61%), Positives = 247/339 (72%)
Query: 6 NILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVG 65
NILVTGGAG+IG+H LQLL GG+ V+IDNL NS ++ RVKDLAG + L H
Sbjct: 4 NILVTGGAGYIGSHTVLQLLLGGYNTVVIDNLDNSSLVSIQRVKDLAGDH-GQNLTVHQV 62
Query: 66 DLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCK 125
DLR+K L+K+FS KF+AV+HF LKAV ESV P Y++NNLI TI L + MA + CK
Sbjct: 63 DLRDKPALEKVFSETKFDAVMHFAGLKAVGESVAKPLLYYNNNLIATITLLEVMAAHGCK 122
Query: 126 KLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKADPEWRIILLRYF 185
KLVFSSSAT+YG P+++PC E+ P M+PYGRTK + E+I DVQ+ DPEWRII+LRYF
Sbjct: 123 KLVFSSSATVYGWPKEVPCTEESPLSGMSPYGRTKLFIEDICRDVQRGDPEWRIIMLRYF 182
Query: 186 NPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAVRDYIHVMD 245
NPVGAH SG++GEDP G PNNLMPY+QQV VGR P L +YG DY TKDG+ VRDYIHV+D
Sbjct: 183 NPVGAHPSGRIGEDPCGTPNNLMPYVQQVVVGRLPNLKIYGTDYTTKDGTGVRDYIHVVD 242
Query: 246 LADG--------------CIAYNLGNGKGISVLEMVAAFEKASGKKIPIKFCPRRVGDAT 291
LADG C YNLG GKG +VLEMV AFEKASG KIP+ RR GDA
Sbjct: 243 LADGHICALQKLDDTEIGCEVYNLGTGKGTTVLEMVDAFEKASGMKIPLVKVGRRPGDAE 302
Query: 292 AVYAATDKAHKELGWKPKYGIEDMCAHQWNWAKNNPMGY 330
VYA+T+KA +EL WK +GIE+MC QWNWA NNP GY
Sbjct: 303 TVYASTEKAERELNWKANFGIEEMCRDQWNWASNNPFGY 341
|
|
| TIGR_CMR|BA_5700 BA_5700 "UDP-glucose 4-epimerase" [Bacillus anthracis str. Ames (taxid:198094)] | Back alignment and assigned GO terms |
|---|
Score = 947 (338.4 bits), Expect = 3.3e-95, P = 3.3e-95
Identities = 179/338 (52%), Positives = 230/338 (68%)
Query: 7 ILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGD 66
IL+TGGAG+IG+H ++LL +K++++DNL NS E+++RVK++ G K+ EF+ +
Sbjct: 3 ILITGGAGYIGSHTCVELLNNNYKIIVVDNLSNSSIESLNRVKEITG----KQFEFYKEN 58
Query: 67 LRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKK 126
+ N++ ++++F EAVIHF KAV ES P Y+ NN+I I L M K+N K
Sbjct: 59 VLNREKMNEIFLENNIEAVIHFAGFKAVGESTTTPLAYYYNNIISAIVLCDVMQKHNVKN 118
Query: 127 LVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKADPEWRIILLRYFN 186
+FSSSAT+YG P+ +P E+FP NPYG+TK E+I DV KAD EW I LLRYFN
Sbjct: 119 FIFSSSATVYGIPKTLPITEEFPLSVTNPYGQTKLMIEQIMRDVAKADDEWSIALLRYFN 178
Query: 187 PVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAVRDYIHVMDL 246
P GAH+SG++GEDP GIPNNLMPY+ QVAVG+ ELN++G DYPTKDG+ VRDYIHV+DL
Sbjct: 179 PFGAHQSGRIGEDPNGIPNNLMPYVTQVAVGKLKELNIFGNDYPTKDGTGVRDYIHVVDL 238
Query: 247 ADGCI-------------AYNLGNGKGISVLEMVAAFEKASGKKIPIKFCPRRVGDATAV 293
A G + AYNLG GKG SVLEMV AFEK SGKKIP K RR GD
Sbjct: 239 AKGHVKALEKVLKTKGIEAYNLGTGKGYSVLEMVKAFEKVSGKKIPYKVIGRRPGDVAIC 298
Query: 294 YAATDKAHKELGWKPKYGIEDMCAHQWNWAKNNPMGYQ 331
+A KA +ELGW+ +YG+E+MC W W NN GYQ
Sbjct: 299 FADVSKAKRELGWEAEYGLEEMCVDSWRWQVNNKNGYQ 336
|
|
| TIGR_CMR|SO_1664 SO_1664 "UDP-glucose 4-epimerase" [Shewanella oneidensis MR-1 (taxid:211586)] | Back alignment and assigned GO terms |
|---|
Score = 914 (326.8 bits), Expect = 1.0e-91, P = 1.0e-91
Identities = 179/338 (52%), Positives = 223/338 (65%)
Query: 7 ILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGD 66
ILVTGGAG+IGTH ++LL G +V+++DNL NS EA+DRV+ + G K + F+ GD
Sbjct: 3 ILVTGGAGYIGTHTVVELLNAGSEVIVLDNLSNSSIEALDRVERITG----KSVTFYQGD 58
Query: 67 LRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKK 126
+ NK L K+FS +AVIHF LKAV ESV P +Y++NN+ GT+ L Q MA++ K
Sbjct: 59 ILNKALLQKVFSDHSIDAVIHFAGLKAVGESVAKPLKYYENNVTGTLILCQVMAEFKVKN 118
Query: 127 LVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKADPEWRIILLRYFN 186
LVFSSSAT+YG P +P EDFP GA NPYG++K E I D+ +DP W I LRYFN
Sbjct: 119 LVFSSSATVYGDPASLPITEDFPTGATNPYGQSKLMVEHILADLHHSDPSWNIARLRYFN 178
Query: 187 PVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAVRDYIHVMDL 246
PVGAH SG +GEDP IPNNLMP+I QVAVG+ L+V+G DYPT DG+ VRDYIHV+DL
Sbjct: 179 PVGAHASGLIGEDPNDIPNNLMPFIAQVAVGKREALSVFGNDYPTHDGTGVRDYIHVVDL 238
Query: 247 A-------------DGCIAYNLGNGKGISVLEMVAAFEKASGKKIPIKFCPRRVGDATAV 293
A G + YNLG G+G SVL+MV AFEKA GK I PRR GD A
Sbjct: 239 AIGHLKALEKLATKPGLVTYNLGTGQGYSVLDMVKAFEKACGKSIAYLIAPRRPGDIAAC 298
Query: 294 YAATDKAHKELGWKPKYGIEDMCAHQWNWAKNNPMGYQ 331
YA D A +L W+ + +EDM W+W NP GY+
Sbjct: 299 YADPDHAKTDLDWQATHSLEDMANSSWHWQSTNPNGYK 336
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| DICTYBASE|DDB_G0275295 galE "UDP-glucose 4-epimerase" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
Score = 913 (326.5 bits), Expect = 1.3e-91, P = 1.3e-91
Identities = 173/341 (50%), Positives = 228/341 (66%)
Query: 4 EKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFH 63
+ I+VTGGAG+IG+H ++L++ G+ V++DNL NS EA+ RV+ + G K++EFH
Sbjct: 5 DDRIMVTGGAGYIGSHTVIELIEAGYTPVIVDNLSNSSLEAIKRVESITG----KEIEFH 60
Query: 64 VGDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYN 123
D+ N+ LD++F + +VIHF LKAV ES + P +Y++NN+ GT+ L M K+
Sbjct: 61 HVDIMNEKALDEIFETGNIRSVIHFAGLKAVGESNKLPLKYYNNNIAGTLTLLNLMDKHR 120
Query: 124 CKKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKADPEWRIILLR 183
KKLVFSSSAT+YG P +P EDFP A NPYGRTK + E I D+ +DPEW I+LR
Sbjct: 121 VKKLVFSSSATVYGDPHTVPITEDFPLSATNPYGRTKLYVEGILQDLCASDPEWNCIMLR 180
Query: 184 YFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAVRDYIHV 243
YFNPVGAH SG +GEDPK IPNNLMPY+ Q A+G+ P L+++G DY T DG+ VRD+IHV
Sbjct: 181 YFNPVGAHPSGLIGEDPKDIPNNLMPYVTQTAIGKRPILSIFGNDYNTPDGTGVRDFIHV 240
Query: 244 MDLA--------------DGCIAYNLGNGKGISVLEMVAAFEKASGKKIPIKFCPRRVGD 289
+DLA GC+AYNLG G+G SVLEMV A ++AS K+IP + RR GD
Sbjct: 241 VDLAKGHISALSSLHSKKQGCVAYNLGTGRGYSVLEMVGALKQASHKEIPYQIVSRRKGD 300
Query: 290 ATAVYAATDKAHKELGWKPKYGIEDMCAHQWNWAKNNPMGY 330
+ +A KA KELGWK + +DMC W W NP GY
Sbjct: 301 VASSFADPSKALKELGWKATHNQDDMCRDAWKWQSLNPNGY 341
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| UNIPROTKB|Q4QRB0 Gale "Gale protein" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 897 (320.8 bits), Expect = 6.5e-90, P = 6.5e-90
Identities = 180/347 (51%), Positives = 227/347 (65%)
Query: 4 EKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSV------PEAVDRVKDLAGPELA 57
E+ +LVTGGAG+IG+H L+LL+ G+ V+IDN HNS+ PE++ RV++L G
Sbjct: 2 EEKVLVTGGAGYIGSHTVLELLEAGYSPVVIDNFHNSIRGEDSMPESLRRVQELTG---- 57
Query: 58 KKLEFHVGDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQ 117
+ +EF D+ ++ L LF F+AVIHF LKAV ESVQ P Y+ NL GTI L +
Sbjct: 58 RSVEFEEMDILDQAALQHLFKKHNFKAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLE 117
Query: 118 AMAKYNCKKLVFSSSATIYGQPEKIPCVEDFPYGAM-NPYGRTKQWCEEIAFDVQKADPE 176
M + K LVFSSSAT+YG P+ +P E P G NPYG++K + EE+ D+ +AD
Sbjct: 118 IMRAHGVKSLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIQDLCRADTA 177
Query: 177 WRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSA 236
W +LLRYFNP+GAH SG++GEDP+GIPNNLMPY+ QVA+GR LNV+G DY T+DG+
Sbjct: 178 WNAVLLRYFNPIGAHASGRIGEDPQGIPNNLMPYVSQVAIGRREALNVFGDDYATEDGTG 237
Query: 237 VRDYIHVMDLADGCIA-------------YNLGNGKGISVLEMVAAFEKASGKKIPIKFC 283
VRDYIHV+DLA G IA YNLG G G SVL+MV A EKASGKKIP K
Sbjct: 238 VRDYIHVVDLAKGHIAALKKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGKKIPYKVV 297
Query: 284 PRRVGDATAVYAATDKAHKELGWKPKYGIEDMCAHQWNWAKNNPMGY 330
RR GD A YA AH+ELGW G++ MC W W K NP G+
Sbjct: 298 ARREGDVAACYANPSLAHEELGWTAALGLDRMCEDLWRWQKQNPSGF 344
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| UNIPROTKB|Q9KLH0 VC_A0774 "UDP-glucose 4-epimerase" [Vibrio cholerae O1 biovar El Tor str. N16961 (taxid:243277)] | Back alignment and assigned GO terms |
|---|
Score = 895 (320.1 bits), Expect = 1.1e-89, P = 1.1e-89
Identities = 177/337 (52%), Positives = 221/337 (65%)
Query: 7 ILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGD 66
+LVTGG G+IG+H +Q++Q G V++DNL+NS +DR++ + G + +F GD
Sbjct: 3 VLVTGGMGYIGSHTCIQMIQAGMTPVILDNLYNSKVTVLDRIEKVIGV----RPQFVQGD 58
Query: 67 LRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKK 126
+R+K L L EAV+HF LKAV ESVQ P Y+DNN+ GT+ L AM + K
Sbjct: 59 IRDKALLVDLMQQHNIEAVVHFAGLKAVGESVQKPLEYYDNNVNGTLVLVAAMREAGVKS 118
Query: 127 LVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKADPEWRIILLRYFN 186
LVFSSSAT+YG+P +P E FP A NPYGR+K EE D QKA+P+W I LLRYFN
Sbjct: 119 LVFSSSATVYGEPTSVPITESFPTKAANPYGRSKLMVEECLTDFQKANPDWSITLLRYFN 178
Query: 187 PVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAVRDYIHVMDL 246
PVG+H SG+LGEDP+GIPNNLMP++ QVAVGR L+V+G DYPTKDG+ VRDYIHVMDL
Sbjct: 179 PVGSHPSGELGEDPQGIPNNLMPFVTQVAVGRREYLSVFGSDYPTKDGTGVRDYIHVMDL 238
Query: 247 ADGCIA-------------YNLGNGKGISVLEMVAAFEKASGKKIPIKFCPRRVGDATAV 293
ADG IA YNLG GKG SVL++V AFE ASG+ +P K RR GD
Sbjct: 239 ADGHIAALKKVGTCAGLHIYNLGTGKGYSVLDVVKAFETASGRTVPYKLVDRRPGDIAEY 298
Query: 294 YAATDKAHKELGWKPKYGIEDMCAHQWNWAKNNPMGY 330
+A KA ++LGWK + M W W NNP GY
Sbjct: 299 WADPTKAAQDLGWKATRNLHTMAQDAWCWQSNNPQGY 335
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q9KDV3 | GALE_BACHD | 5, ., 1, ., 3, ., 2 | 0.4109 | 0.9134 | 0.9161 | yes | no |
| Q9Y7X5 | UGE1_SCHPO | No assigned EC number | 0.4885 | 0.9791 | 0.9239 | yes | no |
| Q45291 | GALE_CORGL | 5, ., 1, ., 3, ., 2 | 0.3702 | 0.8567 | 0.8723 | yes | no |
| Q9F7D4 | GALE_YERPE | 5, ., 1, ., 3, ., 2 | 0.5 | 0.9552 | 0.9467 | yes | no |
| P55180 | GALE_BACSU | 5, ., 1, ., 3, ., 2 | 0.5486 | 0.9611 | 0.9498 | yes | no |
| P56997 | GALE_NEIMA | 5, ., 1, ., 3, ., 2 | 0.4941 | 0.9611 | 0.9498 | yes | no |
| P22715 | GALE_SALTY | 5, ., 1, ., 3, ., 2 | 0.5147 | 0.9552 | 0.9467 | yes | no |
| Q5R8D0 | GALE_PONAB | 5, ., 1, ., 3, ., 2 | 0.5128 | 0.9701 | 0.9339 | yes | no |
| P33119 | GALE_CORDI | 5, ., 1, ., 3, ., 2 | 0.3904 | 0.8537 | 0.8719 | yes | no |
| Q9W0P5 | GALE_DROME | 5, ., 1, ., 3, ., 2 | 0.4914 | 0.9671 | 0.9257 | yes | no |
| Q9CNY5 | GALE_PASMU | 5, ., 1, ., 3, ., 2 | 0.4955 | 0.9582 | 0.9497 | yes | no |
| Q05026 | GALE_NEIGO | 5, ., 1, ., 3, ., 2 | 0.4808 | 0.9582 | 0.9497 | yes | no |
| O65781 | GALE2_CYATE | 5, ., 1, ., 3, ., 2 | 0.6286 | 0.9761 | 0.9342 | N/A | no |
| O65780 | GALE1_CYATE | 5, ., 1, ., 3, ., 2 | 0.6925 | 0.9940 | 0.9406 | N/A | no |
| Q8R059 | GALE_MOUSE | 5, ., 1, ., 3, ., 2 | 0.5144 | 0.9611 | 0.9279 | yes | no |
| Q42605 | GALE1_ARATH | 5, ., 1, ., 3, ., 2 | 0.7507 | 0.9850 | 0.9401 | yes | no |
| P56985 | GALE_NEIMB | 5, ., 1, ., 3, ., 2 | 0.4882 | 0.9611 | 0.9498 | yes | no |
| O84903 | GALE_LACCA | 5, ., 1, ., 3, ., 2 | 0.4081 | 0.9194 | 0.9305 | yes | no |
| P09147 | GALE_ECOLI | 5, ., 1, ., 3, ., 2 | 0.5029 | 0.9552 | 0.9467 | N/A | no |
| Q7WTB1 | GALE_LACHE | 5, ., 1, ., 3, ., 2 | 0.3988 | 0.9373 | 0.9515 | yes | no |
| P24325 | GALE_HAEIN | 5, ., 1, ., 3, ., 2 | 0.5044 | 0.9582 | 0.9497 | yes | no |
| Q43070 | GALE1_PEA | 5, ., 1, ., 3, ., 2 | 0.7298 | 0.9940 | 0.9514 | N/A | no |
| P35673 | GALE_ERWAM | 5, ., 1, ., 3, ., 2 | 0.5059 | 0.9552 | 0.9495 | yes | no |
| P26503 | EXOB_RHIME | 5, ., 1, ., 3, ., 2 | 0.3805 | 0.9194 | 0.9390 | yes | no |
| Q553X7 | GALE_DICDI | 5, ., 1, ., 3, ., 2 | 0.5058 | 0.9671 | 0.9418 | yes | no |
| Q56093 | GALE_SALTI | 5, ., 1, ., 3, ., 2 | 0.5132 | 0.9582 | 0.9497 | N/A | no |
| Q14376 | GALE_HUMAN | 5, ., 1, ., 3, ., 2 | 0.5100 | 0.9701 | 0.9339 | yes | no |
| P75517 | GALE_MYCPN | 5, ., 1, ., 3, ., 2 | 0.3061 | 0.8895 | 0.8816 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 5.1.3.2 | 0.979 |
| 3rd Layer | 1.1.1 | LOW CONFIDENCE prediction! |
| 3rd Layer | 5.1.3 | 0.983 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
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 | estExt_fgenesh4_pg.C_LG_III1010 | SubName- Full=Putative uncharacterized protein; (350 aa) | |||||||||
(Populus trichocarpa) | |||||||||||
Predicted Functional Partners: | |||||||||||
 | eugene3.00101501 | UDP-glucose 6-dehydrogenase (EC-1.1.1.22) (480 aa) | • | • | • | 0.970 | |||||
 | estExt_fgenesh4_pm.C_LG_XVII0156 | UDP-glucose 6-dehydrogenase (EC-1.1.1.22) (481 aa) | • | • | • | 0.970 | |||||
 | estExt_fgenesh4_pm.C_LG_VIII0382 | UDP-glucose 6-dehydrogenase (EC-1.1.1.22) (480 aa) | • | • | • | 0.969 | |||||
 | eugene3.00061661 | galactose-1-phosphate uridylyltransferase (EC-2.7.7.10) (348 aa) | • | • | • | 0.914 | |||||
 | gw1.XIII.2344.1 | hypothetical protein (409 aa) | • | 0.899 | |||||||
 | gw1.5051.2.1 | hypothetical protein (250 aa) | • | 0.899 | |||||||
 | eugene3.40280001 | UTP--glucose-1-phosphate uridylyltransferase (308 aa) | • | 0.899 | |||||||
 | eugene3.01470010 | UDP-glucose 4,6-dehydratase (EC-4.2.1.76) (660 aa) | • | • | 0.899 | ||||||
 | eugene3.00440223 | UTP--glucose-1-phosphate uridylyltransferase (EC-2.7.7.9) (469 aa) | • | 0.899 | |||||||
 | estExt_fgenesh4_pg.C_LG_VI1540 | UDP-sulfoquinovose synthase (EC-3.13.1.1) (483 aa) | • | • | 0.899 | ||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 335 | |||
| PLN02240 | 352 | PLN02240, PLN02240, UDP-glucose 4-epimerase | 0.0 | |
| cd05247 | 323 | cd05247, UDP_G4E_1_SDR_e, UDP-glucose 4 epimerase, | 1e-177 | |
| COG1087 | 329 | COG1087, GalE, UDP-glucose 4-epimerase [Cell envel | 1e-162 | |
| TIGR01179 | 328 | TIGR01179, galE, UDP-glucose-4-epimerase GalE | 1e-146 | |
| PRK10675 | 338 | PRK10675, PRK10675, UDP-galactose-4-epimerase; Pro | 1e-140 | |
| cd05256 | 304 | cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-e | 3e-66 | |
| COG0451 | 314 | COG0451, WcaG, Nucleoside-diphosphate-sugar epimer | 2e-58 | |
| pfam01370 | 233 | pfam01370, Epimerase, NAD dependent epimerase/dehy | 4e-55 | |
| cd05253 | 332 | cd05253, UDP_GE_SDE_e, UDP glucuronic acid epimera | 4e-52 | |
| cd05264 | 300 | cd05264, UDP_G4E_5_SDR_e, UDP-glucose 4-epimerase | 1e-43 | |
| cd05234 | 305 | cd05234, UDP_G4E_2_SDR_e, UDP-glucose 4 epimerase, | 2e-42 | |
| cd08946 | 200 | cd08946, SDR_e, extended (e) SDRs | 2e-39 | |
| cd05257 | 316 | cd05257, Arna_like_SDR_e, Arna decarboxylase_like, | 2e-36 | |
| pfam13950 | 62 | pfam13950, Epimerase_Csub, UDP-glucose 4-epimerase | 2e-33 | |
| cd05258 | 337 | cd05258, CDP_TE_SDR_e, CDP-tyvelose 2-epimerase, e | 2e-33 | |
| cd05246 | 315 | cd05246, dTDP_GD_SDR_e, dTDP-D-glucose 4,6-dehydra | 7e-33 | |
| cd05230 | 305 | cd05230, UGD_SDR_e, UDP-glucuronate decarboxylase | 2e-30 | |
| TIGR04180 | 297 | TIGR04180, EDH_00030, NAD dependent epimerase/dehy | 3e-29 | |
| cd05260 | 316 | cd05260, GDP_MD_SDR_e, GDP-mannose 4,6 dehydratase | 6e-29 | |
| cd05248 | 317 | cd05248, ADP_GME_SDR_e, ADP-L-glycero-D-mannohepto | 5e-27 | |
| TIGR02197 | 314 | TIGR02197, heptose_epim, ADP-L-glycero-D-manno-hep | 1e-24 | |
| COG1088 | 340 | COG1088, RfbB, dTDP-D-glucose 4,6-dehydratase [Cel | 3e-24 | |
| TIGR01181 | 317 | TIGR01181, dTDP_gluc_dehyt, dTDP-glucose 4,6-dehyd | 4e-23 | |
| PLN02166 | 436 | PLN02166, PLN02166, dTDP-glucose 4,6-dehydratase | 3e-21 | |
| cd05252 | 336 | cd05252, CDP_GD_SDR_e, CDP-D-glucose 4,6-dehydrata | 4e-21 | |
| cd05237 | 287 | cd05237, UDP_invert_4-6DH_SDR_e, UDP-Glcnac (UDP-l | 1e-20 | |
| cd05273 | 328 | cd05273, GME-like_SDR_e, Arabidopsis thaliana GDP- | 3e-20 | |
| cd05238 | 305 | cd05238, Gne_like_SDR_e, Escherichia coli Gne (a n | 1e-18 | |
| PRK15181 | 348 | PRK15181, PRK15181, Vi polysaccharide biosynthesis | 4e-18 | |
| cd09813 | 335 | cd09813, 3b-HSD-NSDHL-like_SDR_e, human NSDHL (NAD | 5e-18 | |
| cd05241 | 331 | cd05241, 3b-HSD-like_SDR_e, 3beta-hydroxysteroid d | 5e-18 | |
| PLN02206 | 442 | PLN02206, PLN02206, UDP-glucuronate decarboxylase | 2e-17 | |
| cd08957 | 307 | cd08957, WbmH_like_SDR_e, Bordetella bronchiseptic | 2e-17 | |
| cd05239 | 300 | cd05239, GDP_FS_SDR_e, GDP-fucose synthetase, exte | 1e-16 | |
| COG1089 | 345 | COG1089, Gmd, GDP-D-mannose dehydratase [Cell enve | 2e-16 | |
| cd05240 | 306 | cd05240, UDP_G4E_3_SDR_e, UDP-glucose 4 epimerase | 2e-16 | |
| COG1086 | 588 | COG1086, COG1086, Predicted nucleoside-diphosphate | 3e-15 | |
| PLN02260 | 668 | PLN02260, PLN02260, probable rhamnose biosynthetic | 4e-15 | |
| cd05255 | 382 | cd05255, SQD1_like_SDR_e, UDP_sulfoquinovose_synth | 3e-14 | |
| PRK10217 | 355 | PRK10217, PRK10217, dTDP-glucose 4,6-dehydratase; | 6e-14 | |
| cd05226 | 176 | cd05226, SDR_e_a, Extended (e) and atypical (a) SD | 1e-13 | |
| cd05228 | 318 | cd05228, AR_FR_like_1_SDR_e, uncharacterized subgr | 2e-13 | |
| pfam01073 | 280 | pfam01073, 3Beta_HSD, 3-beta hydroxysteroid dehydr | 8e-13 | |
| pfam02719 | 280 | pfam02719, Polysacc_synt_2, Polysaccharide biosynt | 1e-12 | |
| cd05232 | 303 | cd05232, UDP_G4E_4_SDR_e, UDP-glucose 4 epimerase, | 2e-12 | |
| cd05265 | 250 | cd05265, SDR_a1, atypical (a) SDRs, subgroup 1 | 5e-12 | |
| TIGR02622 | 349 | TIGR02622, CDP_4_6_dhtase, CDP-glucose 4,6-dehydra | 7e-12 | |
| PLN02725 | 306 | PLN02725, PLN02725, GDP-4-keto-6-deoxymannose-3,5- | 1e-11 | |
| cd05227 | 301 | cd05227, AR_SDR_e, aldehyde reductase, extended (e | 6e-11 | |
| PRK10084 | 352 | PRK10084, PRK10084, dTDP-glucose 4,6 dehydratase; | 6e-11 | |
| PLN02572 | 442 | PLN02572, PLN02572, UDP-sulfoquinovose synthase | 4e-10 | |
| TIGR03466 | 328 | TIGR03466, HpnA, hopanoid-associated sugar epimera | 5e-10 | |
| cd05233 | 234 | cd05233, SDR_c, classical (c) SDRs | 3e-09 | |
| PLN02695 | 370 | PLN02695, PLN02695, GDP-D-mannose-3',5'-epimerase | 4e-09 | |
| COG1028 | 251 | COG1028, FabG, Dehydrogenases with different speci | 6e-09 | |
| cd05263 | 293 | cd05263, MupV_like_SDR_e, Pseudomonas fluorescens | 7e-09 | |
| pfam04321 | 284 | pfam04321, RmlD_sub_bind, RmlD substrate binding d | 1e-08 | |
| COG3320 | 382 | COG3320, COG3320, Putative dehydrogenase domain of | 2e-08 | |
| TIGR01472 | 343 | TIGR01472, gmd, GDP-mannose 4,6-dehydratase | 2e-08 | |
| pfam13460 | 182 | pfam13460, NAD_binding_10, NADH(P)-binding | 4e-08 | |
| cd05254 | 280 | cd05254, dTDP_HR_like_SDR_e, dTDP-6-deoxy-L-lyxo-4 | 2e-07 | |
| cd09811 | 354 | cd09811, 3b-HSD_HSDB1_like_SDR_e, human 3beta-HSD | 2e-07 | |
| PRK11150 | 308 | PRK11150, rfaD, ADP-L-glycero-D-mannoheptose-6-epi | 4e-07 | |
| COG1091 | 281 | COG1091, RfbD, dTDP-4-dehydrorhamnose reductase [C | 5e-07 | |
| cd05243 | 203 | cd05243, SDR_a5, atypical (a) SDRs, subgroup 5 | 8e-07 | |
| TIGR01214 | 287 | TIGR01214, rmlD, dTDP-4-dehydrorhamnose reductase | 1e-06 | |
| cd05323 | 244 | cd05323, ADH_SDR_c_like, insect type alcohol dehyd | 2e-06 | |
| TIGR03589 | 324 | TIGR03589, PseB, UDP-N-acetylglucosamine 4,6-dehyd | 2e-06 | |
| cd05352 | 252 | cd05352, MDH-like_SDR_c, mannitol dehydrogenase (M | 2e-06 | |
| cd05235 | 290 | cd05235, SDR_e1, extended (e) SDRs, subgroup 1 | 5e-06 | |
| cd05271 | 273 | cd05271, NDUFA9_like_SDR_a, NADH dehydrogenase (ub | 6e-06 | |
| cd05366 | 257 | cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol | 7e-06 | |
| cd05193 | 295 | cd05193, AR_like_SDR_e, aldehyde reductase, flavon | 8e-06 | |
| PRK05653 | 246 | PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein) | 1e-05 | |
| cd05262 | 291 | cd05262, SDR_a7, atypical (a) SDRs, subgroup 7 | 1e-05 | |
| pfam07993 | 245 | pfam07993, NAD_binding_4, Male sterility protein | 1e-05 | |
| cd08958 | 293 | cd08958, FR_SDR_e, flavonoid reductase (FR), exten | 1e-05 | |
| COG1090 | 297 | COG1090, COG1090, Predicted nucleoside-diphosphate | 1e-05 | |
| TIGR01746 | 367 | TIGR01746, Thioester-redct, thioester reductase do | 2e-05 | |
| COG4221 | 246 | COG4221, COG4221, Short-chain alcohol dehydrogenas | 2e-05 | |
| cd08953 | 436 | cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup | 2e-05 | |
| cd05272 | 308 | cd05272, TDH_SDR_e, L-threonine dehydrogenase, ext | 3e-05 | |
| PRK09186 | 256 | PRK09186, PRK09186, flagellin modification protein | 3e-05 | |
| PRK11908 | 347 | PRK11908, PRK11908, NAD-dependent epimerase/dehydr | 3e-05 | |
| cd05344 | 253 | cd05344, BKR_like_SDR_like, putative beta-ketoacyl | 3e-05 | |
| pfam00106 | 167 | pfam00106, adh_short, short chain dehydrogenase | 3e-05 | |
| TIGR04130 | 337 | TIGR04130, FnlA, UDP-N-acetylglucosamine 4,6-dehyd | 4e-05 | |
| cd09812 | 339 | cd09812, 3b-HSD_like_1_SDR_e, 3beta-hydroxysteroid | 4e-05 | |
| PRK12825 | 249 | PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein) | 5e-05 | |
| PRK05557 | 248 | PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) | 5e-05 | |
| cd05244 | 207 | cd05244, BVR-B_like_SDR_a, biliverdin IX beta redu | 7e-05 | |
| COG0702 | 275 | COG0702, COG0702, Predicted nucleoside-diphosphate | 1e-04 | |
| PRK09135 | 249 | PRK09135, PRK09135, pteridine reductase; Provision | 1e-04 | |
| cd08939 | 239 | cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine | 2e-04 | |
| cd05358 | 253 | cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (Glc | 4e-04 | |
| PRK08642 | 253 | PRK08642, fabG, 3-ketoacyl-(acyl-carrier-protein) | 5e-04 | |
| cd02266 | 186 | cd02266, SDR, Short-chain dehydrogenases/reductase | 5e-04 | |
| cd05339 | 243 | cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hy | 6e-04 | |
| TIGR01777 | 291 | TIGR01777, yfcH, TIGR01777 family protein | 7e-04 | |
| cd05362 | 243 | cd05362, THN_reductase-like_SDR_c, tetrahydroxynap | 7e-04 | |
| PLN02653 | 340 | PLN02653, PLN02653, GDP-mannose 4,6-dehydratase | 8e-04 | |
| PLN02427 | 386 | PLN02427, PLN02427, UDP-apiose/xylose synthase | 0.001 | |
| cd05242 | 296 | cd05242, SDR_a8, atypical (a) SDRs, subgroup 8 | 0.002 | |
| cd05359 | 242 | cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_c | 0.002 | |
| PRK05565 | 247 | PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein) | 0.002 | |
| TIGR02415 | 254 | TIGR02415, 23BDH, acetoin reductases | 0.002 | |
| cd08930 | 250 | cd08930, SDR_c8, classical (c) SDR, subgroup 8 | 0.003 | |
| cd05267 | 203 | cd05267, SDR_a6, atypical (a) SDRs, subgroup 6 | 0.003 | |
| PRK12939 | 250 | PRK12939, PRK12939, short chain dehydrogenase; Pro | 0.003 | |
| cd08931 | 227 | cd08931, SDR_c9, classical (c) SDR, subgroup 9 | 0.003 | |
| TIGR03443 | 1389 | TIGR03443, alpha_am_amid, L-aminoadipate-semialdeh | 0.004 |
| >gnl|CDD|177883 PLN02240, PLN02240, UDP-glucose 4-epimerase | Back alignment and domain information |
|---|
Score = 648 bits (1675), Expect = 0.0
Identities = 231/348 (66%), Positives = 269/348 (77%), Gaps = 16/348 (4%)
Query: 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLE 61
+ ILVTGGAG+IG+H LQLL G+KVV+IDNL NS EA+ RVK+LAG +L L
Sbjct: 3 LMGRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAG-DLGDNLV 61
Query: 62 FHVGDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAK 121
FH DLR+K+ L+K+F+S +F+AVIHF LKAV ESV P Y+DNNL+GTINL + MAK
Sbjct: 62 FHKVDLRDKEALEKVFASTRFDAVIHFAGLKAVGESVAKPLLYYDNNLVGTINLLEVMAK 121
Query: 122 YNCKKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKADPEWRIIL 181
+ CKKLVFSSSAT+YGQPE++PC E+FP A NPYGRTK + EEI D+ +DPEW+IIL
Sbjct: 122 HGCKKLVFSSSATVYGQPEEVPCTEEFPLSATNPYGRTKLFIEEICRDIHASDPEWKIIL 181
Query: 182 LRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAVRDYI 241
LRYFNPVGAH SG++GEDPKGIPNNLMPY+QQVAVGR PEL V+G DYPTKDG+ VRDYI
Sbjct: 182 LRYFNPVGAHPSGRIGEDPKGIPNNLMPYVQQVAVGRRPELTVFGNDYPTKDGTGVRDYI 241
Query: 242 HVMDLADG---------------CIAYNLGNGKGISVLEMVAAFEKASGKKIPIKFCPRR 286
HVMDLADG C AYNLG GKG SVLEMVAAFEKASGKKIP+K PRR
Sbjct: 242 HVMDLADGHIAALRKLFTDPDIGCEAYNLGTGKGTSVLEMVAAFEKASGKKIPLKLAPRR 301
Query: 287 VGDATAVYAATDKAHKELGWKPKYGIEDMCAHQWNWAKNNPMGYQTKR 334
GDA VYA+T+KA KELGWK KYGI++MC QWNWA NP GY +
Sbjct: 302 PGDAEEVYASTEKAEKELGWKAKYGIDEMCRDQWNWASKNPYGYGSSP 349
|
Length = 352 |
| >gnl|CDD|187558 cd05247, UDP_G4E_1_SDR_e, UDP-glucose 4 epimerase, subgroup 1, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 493 bits (1273), Expect = e-177
Identities = 172/332 (51%), Positives = 226/332 (68%), Gaps = 22/332 (6%)
Query: 6 NILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVG 65
+LVTGGAG+IG+H ++LL+ G+ VV++DNL N EA+ R++ + ++EF+ G
Sbjct: 1 KVLVTGGAGYIGSHTVVELLEAGYDVVVLDNLSNGHREALPRIEKI-------RIEFYEG 53
Query: 66 DLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCK 125
D+R++ LDK+F+ K +AVIHF ALKAV ESVQ P +Y+DNN++GT+NL +AM + K
Sbjct: 54 DIRDRAALDKVFAEHKIDAVIHFAALKAVGESVQKPLKYYDNNVVGTLNLLEAMRAHGVK 113
Query: 126 KLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKADPEWRIILLRYF 185
VFSSSA +YG+PE +P E+ P NPYGRTK E+I D+ KA P ++LRYF
Sbjct: 114 NFVFSSSAAVYGEPETVPITEEAPLNPTNPYGRTKLMVEQILRDLAKA-PGLNYVILRYF 172
Query: 186 NPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAVRDYIHVMD 245
NP GAH SG +GEDP+ IPNNL+PY+ QVA+GR +L ++G DYPT DG+ VRDYIHV+D
Sbjct: 173 NPAGAHPSGLIGEDPQ-IPNNLIPYVLQVALGRREKLAIFGDDYPTPDGTCVRDYIHVVD 231
Query: 246 LADG-------------CIAYNLGNGKGISVLEMVAAFEKASGKKIPIKFCPRRVGDATA 292
LAD YNLG G+G SVLE+V AFEK SGK IP + PRR GD +
Sbjct: 232 LADAHVLALEKLENGGGSEIYNLGTGRGYSVLEVVEAFEKVSGKPIPYEIAPRRAGDPAS 291
Query: 293 VYAATDKAHKELGWKPKYGIEDMCAHQWNWAK 324
+ A KA +ELGWKPK +EDMC WNW
Sbjct: 292 LVADPSKAREELGWKPKRDLEDMCEDAWNWQS 323
|
UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 323 |
| >gnl|CDD|224012 COG1087, GalE, UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Score = 455 bits (1172), Expect = e-162
Identities = 140/341 (41%), Positives = 208/341 (60%), Gaps = 27/341 (7%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHV 64
+LVTGGAG+IG+H QLL+ G +VV++DNL N A+ +++ +F+
Sbjct: 1 MKVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLKLQ----------FKFYE 50
Query: 65 GDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNC 124
GDL ++ L +F K +AV+HF A +V ESVQ+P +Y+DNN++GT+NL +AM +
Sbjct: 51 GDLLDRALLTAVFEENKIDAVVHFAASISVGESVQNPLKYYDNNVVGTLNLIEAMLQTGV 110
Query: 125 KKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKADPEWRIILLRY 184
KK +FSS+A +YG+P P E P +NPYGR+K EEI D KA+P +++++LRY
Sbjct: 111 KKFIFSSTAAVYGEPTTSPISETSPLAPINPYGRSKLMSEEILRDAAKANP-FKVVILRY 169
Query: 185 FNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAVRDYIHVM 244
FN GA G LG+ G L+P + A+G+ +L ++G DY TKDG+ +RDYIHV
Sbjct: 170 FNVAGACPDGTLGQRYPGA-TLLIPVAAEAALGKRDKLFIFGDDYDTKDGTCIRDYIHVD 228
Query: 245 DLADGCIA-------------YNLGNGKGISVLEMVAAFEKASGKKIPIKFCPRRVGDAT 291
DLAD + +NLG+G G SVLE++ A +K +G+ IP++ PRR GD
Sbjct: 229 DLADAHVLALKYLKEGGSNNIFNLGSGNGFSVLEVIEAAKKVTGRDIPVEIAPRRAGDPA 288
Query: 292 AVYAATDKAHKELGWKPKY-GIEDMCAHQWNW-AKNNPMGY 330
+ A + KA + LGW+P Y +ED+ W+W + + GY
Sbjct: 289 ILVADSSKARQILGWQPTYDDLEDIIKDAWDWHQQRHGDGY 329
|
Length = 329 |
| >gnl|CDD|213592 TIGR01179, galE, UDP-glucose-4-epimerase GalE | Back alignment and domain information |
|---|
Score = 415 bits (1069), Expect = e-146
Identities = 167/335 (49%), Positives = 220/335 (65%), Gaps = 21/335 (6%)
Query: 6 NILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVG 65
ILVTGGAG+IG+H QLL+ G +VV++DNL N EA+ R + + F G
Sbjct: 1 KILVTGGAGYIGSHTVRQLLESGHEVVILDNLSNGSREALPRGERITPVT------FVEG 54
Query: 66 DLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCK 125
DLR+++ LD+LF K +AVIHF L AV ESVQ P +Y+ NN++GT+NL +AM + K
Sbjct: 55 DLRDRELLDRLFEEHKIDAVIHFAGLIAVGESVQKPLKYYRNNVVGTLNLLEAMQQAGVK 114
Query: 126 KLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKADPEWRIILLRYF 185
K +FSSSA +YG+P IP ED P G +NPYGR+K E+I D+QKADP+W ++LRYF
Sbjct: 115 KFIFSSSAAVYGEPSSIPISEDSPLGPINPYGRSKLMSEQILRDLQKADPDWSYVILRYF 174
Query: 186 NPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAVRDYIHVMD 245
N GAH SG +GEDP GI +L+PY QVAVG+ +L ++G DYPT DG+ VRDYIHVMD
Sbjct: 175 NVAGAHPSGDIGEDPPGIT-HLIPYACQVAVGKRDKLTIFGTDYPTPDGTCVRDYIHVMD 233
Query: 246 LADGCIA-------------YNLGNGKGISVLEMVAAFEKASGKKIPIKFCPRRVGDATA 292
LAD +A YNLG G+G SVLE++ AF+K SGK P++ PRR GD +
Sbjct: 234 LADAHLAALEYLLNGGGSHVYNLGYGQGFSVLEVIEAFKKVSGKDFPVELAPRRPGDPAS 293
Query: 293 VYAATDKAHKELGWKPKYG-IEDMCAHQWNWAKNN 326
+ A K +ELGW+PKY +E++ W W N
Sbjct: 294 LVADASKIRRELGWQPKYTDLEEIIKDAWRWESRN 328
|
Alternate name: UDPgalactose 4-epimerase This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from This model and described by a separate model [Energy metabolism, Sugars]. Length = 328 |
| >gnl|CDD|182639 PRK10675, PRK10675, UDP-galactose-4-epimerase; Provisional | Back alignment and domain information |
|---|
Score = 400 bits (1030), Expect = e-140
Identities = 174/339 (51%), Positives = 218/339 (64%), Gaps = 18/339 (5%)
Query: 6 NILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVG 65
+LVTGG+G+IG+H +QLLQ G VV++DNL NS + ++ L G K F G
Sbjct: 2 RVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERLGG----KHPTFVEG 57
Query: 66 DLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCK 125
D+RN+ L ++ + VIHF LKAV ESVQ P Y+DNN+ GT+ L AM N K
Sbjct: 58 DIRNEALLTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVK 117
Query: 126 KLVFSSSATIYGQPEKIPCVEDFPYGA-MNPYGRTKQWCEEIAFDVQKADPEWRIILLRY 184
L+FSSSAT+YG KIP VE FP G +PYG++K E+I D+QKA P+W I LLRY
Sbjct: 118 NLIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPDWSIALLRY 177
Query: 185 FNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAVRDYIHVM 244
FNPVGAH SG +GEDP+GIPNNLMPYI QVAVGR L ++G DYPT+DG+ VRDYIHVM
Sbjct: 178 FNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVM 237
Query: 245 DLADGCIA-------------YNLGNGKGISVLEMVAAFEKASGKKIPIKFCPRRVGDAT 291
DLADG +A YNLG G G SVL++V AF KA GK + F PRR GD
Sbjct: 238 DLADGHVAAMEKLANKPGVHIYNLGAGVGSSVLDVVNAFSKACGKPVNYHFAPRREGDLP 297
Query: 292 AVYAATDKAHKELGWKPKYGIEDMCAHQWNWAKNNPMGY 330
A +A KA +EL W+ +++M W+W +P GY
Sbjct: 298 AYWADASKADRELNWRVTRTLDEMAQDTWHWQSRHPQGY 336
|
Length = 338 |
| >gnl|CDD|187566 cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-epimerase, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 210 bits (536), Expect = 3e-66
Identities = 101/328 (30%), Positives = 159/328 (48%), Gaps = 36/328 (10%)
Query: 6 NILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVG 65
+LVTGGAGFIG+H +LL+ G +V+++DNL E + VK ++F G
Sbjct: 1 RVLVTGGAGFIGSHLVERLLERGHEVIVLDNLSTGKKENLPEVKP--------NVKFIEG 52
Query: 66 DLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCK 125
D+R+ + ++ F + + V H A +V S++ P + + N++GT+NL +A K K
Sbjct: 53 DIRDDELVEFAF--EGVDYVFHQAAQASVPRSIEDPIKDHEVNVLGTLNLLEAARKAGVK 110
Query: 126 KLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKADPEWRIILLRYF 185
+ V++SS+++YG P +P ED P ++PY +K E V + LRYF
Sbjct: 111 RFVYASSSSVYGDPPYLPKDEDHPPNPLSPYAVSKYAGELYC-QVFARLYGLPTVSLRYF 169
Query: 186 NPVGAHESGKLGEDPKGIPNNLMP-YIQQVAVGRHPELNVYGQDYPTKDGSAVRDYIHVM 244
N G +DP G ++P +I++ G P +YG DG RD+ +V
Sbjct: 170 NVYGP------RQDPNGGYAAVIPIFIERALKGEPPT--IYG------DGEQTRDFTYVE 215
Query: 245 DLADGCIA----------YNLGNGKGISVLEMVAAFEKASGKKIPIKFCPRRVGDATAVY 294
D+ + + YN+G GK SV E+ + GK++ + P R GD
Sbjct: 216 DVVEANLLAATAGAGGEVYNIGTGKRTSVNELAELIREILGKELEPVYAPPRPGDVRHSL 275
Query: 295 AATDKAHKELGWKPKYGIEDMCAHQWNW 322
A KA K LGW+PK E+ W
Sbjct: 276 ADISKAKKLLGWEPKVSFEEGLRLTVEW 303
|
This subgroup contains UDP-N-acetylglucosamine 4-epimerase of Pseudomonas aeruginosa, WbpP, an extended SDR, that catalyzes the NAD+ dependent conversion of UDP-GlcNAc and UDPGalNA to UDP-Glc and UDP-Gal. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 304 |
| >gnl|CDD|223528 COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 190 bits (484), Expect = 2e-58
Identities = 100/327 (30%), Positives = 153/327 (46%), Gaps = 43/327 (13%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHV 64
ILVTGGAGFIG+H +LL G V +D L + + + V EF V
Sbjct: 1 MRILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLLSGV------------EFVV 48
Query: 65 GDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESV-QHPFRYFDNNLIGTINLYQAMAKYN 123
DL ++D +D+L +AVIH A +V +S P + D N+ GT+NL +A
Sbjct: 49 LDLTDRDLVDELA-KGVPDAVIHLAAQSSVPDSNASDPAEFLDVNVDGTLNLLEAARAAG 107
Query: 124 CKKLVFSSS-ATIYGQPEKIPCVED-FPYGAMNPYGRTKQWCEEIAFDVQKADPEWRIIL 181
K+ VF+SS + +YG P +P ED P +NPYG +K E++ + +++
Sbjct: 108 VKRFVFASSVSVVYGDPPPLPIDEDLGPPRPLNPYGVSKLAAEQLLRAYAR-LYGLPVVI 166
Query: 182 LRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAVRDYI 241
LR FN G D + + ++ + + P + + G DGS RD++
Sbjct: 167 LRPFNVYGPG-------DKPDLSSGVVSAFIRQLLKGEPIIVIGG------DGSQTRDFV 213
Query: 242 HVMDLADGCI---------AYNLGNGKG-ISVLEMVAAFEKASGKKIP-IKFCP--RRVG 288
+V D+AD + +N+G+G I+V E+ A +A G K P I + P RR
Sbjct: 214 YVDDVADALLLALENPDGGVFNIGSGTAEITVRELAEAVAEAVGSKAPLIVYIPLGRRGD 273
Query: 289 DATAVYAATDKAHKELGWKPKYGIEDM 315
KA LGW+PK +E+
Sbjct: 274 LREGKLLDISKARAALGWEPKVSLEEG 300
|
Length = 314 |
| >gnl|CDD|216461 pfam01370, Epimerase, NAD dependent epimerase/dehydratase family | Back alignment and domain information |
|---|
Score = 179 bits (456), Expect = 4e-55
Identities = 77/260 (29%), Positives = 123/260 (47%), Gaps = 37/260 (14%)
Query: 7 ILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGD 66
ILVTGG GFIG+H +LLQ G++V+++ S R + FH GD
Sbjct: 1 ILVTGGTGFIGSHLVRRLLQEGYEVIVLGRRRRSESLNTGR------------IRFHEGD 48
Query: 67 LRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKK 126
L + D L++L + + +AVIH A V S + P + N++GT+ L +A + K+
Sbjct: 49 LTDPDALERLLAEVQPDAVIHLAAQSGVGASFEDPADFIRANVLGTLRLLEAARRAGVKR 108
Query: 127 LVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKADPEWRIILLRYFN 186
VF+SS+ +YG P ED P G ++PY K E + +A R ++LR FN
Sbjct: 109 FVFASSSEVYGDVADPPITEDTPLGPLSPYAAAKLAAERLVEAYARAY-GLRAVILRLFN 167
Query: 187 PVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAVRDYIHVMDL 246
G +P +++P + + + P L + G DG+ RD+++V D+
Sbjct: 168 VYGPG-------NPDPFVTHVIPALIRRILEGKPIL-LLG------DGTQRRDFLYVDDV 213
Query: 247 ADGCIA----------YNLG 256
A + YN+G
Sbjct: 214 ARAILLALEHPDGGEIYNIG 233
|
This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions. Length = 233 |
| >gnl|CDD|187563 cd05253, UDP_GE_SDE_e, UDP glucuronic acid epimerase, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 174 bits (444), Expect = 4e-52
Identities = 106/363 (29%), Positives = 168/363 (46%), Gaps = 72/363 (19%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHN--SVPEAVDRVKDLAGPELAKKLEF 62
ILVTG AGFIG H A +LL+ G +VV IDNL++ V R++ L K F
Sbjct: 1 MKILVTGAAGFIGFHVAKRLLERGDEVVGIDNLNDYYDVRLKEARLELLGKSGGFK---F 57
Query: 63 HVGDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKY 122
GDL +++ L +LF +F+AVIH A V S+++P Y D+N++G +NL + +
Sbjct: 58 VKGDLEDREALRRLFKDHEFDAVIHLAAQAGVRYSLENPHAYVDSNIVGFLNLLELCRHF 117
Query: 123 NCKKLVFSSSATIYGQPEKIPCVE----DFPYGAMNPYGRTKQWCEEIA------FDVQK 172
K LV++SS+++YG K+P E D P ++ Y TK+ E +A + +
Sbjct: 118 GVKHLVYASSSSVYGLNTKMPFSEDDRVDHP---ISLYAATKKANELMAHTYSHLYGIP- 173
Query: 173 ADPEWRIILLRYFNPVGAHESGKLGEDPKGIPN-NLMPYIQQVAVGRHPELNVYGQDYPT 231
LR+F G P G P+ L + + + G+ ++V+
Sbjct: 174 ------TTGLRFFTVYG----------PWGRPDMALFLFTKAILEGK--PIDVFN----- 210
Query: 232 KDGSAVRDYIHVMDLADGCIA----------------------------YNLGNGKGISV 263
DG+ RD+ ++ D+ +G + YN+GN + +
Sbjct: 211 -DGNMSRDFTYIDDIVEGVVRALDTPAKPNPNWDAEAPDPSTSSAPYRVYNIGNNSPVKL 269
Query: 264 LEMVAAFEKASGKKIPIKFCPRRVGDATAVYAATDKAHKELGWKPKYGIEDMCAHQWNWA 323
++ + A EKA GKK + P + GD YA K + LG+KPK +E+ W
Sbjct: 270 MDFIEALEKALGKKAKKNYLPMQKGDVPETYADISKLQRLLGYKPKTSLEEGVKRFVEWY 329
Query: 324 KNN 326
K N
Sbjct: 330 KEN 332
|
This subgroup contains UDP-D-glucuronic acid 4-epimerase, an extended SDR, which catalyzes the conversion of UDP-alpha-D-glucuronic acid to UDP-alpha-D-galacturonic acid. This group has the SDR's canonical catalytic tetrad and the TGxxGxxG NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 332 |
| >gnl|CDD|187574 cd05264, UDP_G4E_5_SDR_e, UDP-glucose 4-epimerase (G4E), subgroup 5, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 151 bits (384), Expect = 1e-43
Identities = 91/338 (26%), Positives = 149/338 (44%), Gaps = 58/338 (17%)
Query: 6 NILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVG 65
+L+ GG GFIG+H LL+ G +V + D + P + +++ G
Sbjct: 1 RVLIVGGNGFIGSHLVDALLEEGPQVRVFD--RSIPPYELP----------LGGVDYIKG 48
Query: 66 DLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCK 125
D N+ DL+ + VIH + A S ++P N+ T+ L +A A
Sbjct: 49 DYENRADLESALVGI--DTVIHLASTTNPATSNKNPILDIQTNVAPTVQLLEACAAAGIG 106
Query: 126 KLVF-SSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQWCEEI--AFDVQKADPEWRIILL 182
K++F SS T+YG PE++P E P ++ YG +K E+ + +L
Sbjct: 107 KIIFASSGGTVYGVPEQLPISESDPTLPISSYGISKLAIEKYLRLYQYLYGLD---YTVL 163
Query: 183 RYFNPVGAHESGKLGEDPKG----IPNNLMPYIQQVAVGRHPE---LNVYGQDYPTKDGS 235
R NP G G+ P G IP +A+ + + ++G DG
Sbjct: 164 RISNPYGP------GQRPDGKQGVIP---------IALNKILRGEPIEIWG------DGE 202
Query: 236 AVRDYIHVMDLADGCIA----------YNLGNGKGISVLEMVAAFEKASGKKIPIKFCPR 285
++RDYI++ DL + +A +N+G+G G S+ E++A EK +G+ + + + P
Sbjct: 203 SIRDYIYIDDLVEALMALLRSKGLEEVFNIGSGIGYSLAELIAEIEKVTGRSVQVIYTPA 262
Query: 286 RVGDATAVYAATDKAHKELGWKPKYGIEDMCAHQWNWA 323
R D + +A ELGW PK +ED W W
Sbjct: 263 RTTDVPKIVLDISRARAELGWSPKISLEDGLEKTWQWI 300
|
This subgroup partially conserves the characteristic active site tetrad and NAD-binding motif of the extended SDRs, and has been identified as possible UDP-glucose 4-epimerase (aka UDP-galactose 4-epimerase), a homodimeric member of the extended SDR family. UDP-glucose 4-epimerase catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 300 |
| >gnl|CDD|187545 cd05234, UDP_G4E_2_SDR_e, UDP-glucose 4 epimerase, subgroup 2, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 148 bits (377), Expect = 2e-42
Identities = 98/337 (29%), Positives = 142/337 (42%), Gaps = 72/337 (21%)
Query: 6 NILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKK-LEFHV 64
ILVTGGAGFIG+H +LL+ G +VV++DNL + E ++ PE K F
Sbjct: 1 RILVTGGAGFIGSHLVDRLLEEGNEVVVVDNLSSGRRENIE-------PEFENKAFRFVK 53
Query: 65 GDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNC 124
DL + D + + + V H A V P + N++ T N+ +AM
Sbjct: 54 RDLLDTADK---VAKKDGDTVFHLAANPDVRLGATDPDIDLEENVLATYNVLEAMRANGV 110
Query: 125 KKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQWCEEI------AFDVQKADPEWR 178
K++VF+SS+T+YG+ + IP ED+P ++ YG +K E + F Q W
Sbjct: 111 KRIVFASSSTVYGEAKVIPTPEDYPPLPISVYGASKLAAEALISAYAHLFGFQA----W- 165
Query: 179 IILLRYFNPVGAHESG--------KLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYP 230
+ R+ N VG + KL +P EL V G
Sbjct: 166 --IFRFANIVGPRSTHGVIYDFINKLKRNPN-------------------ELEVLG---- 200
Query: 231 TKDGSAVRDYIHVMDLADG-----------CIAYNLGNGKGISVLEMVAAFEKASGKKIP 279
DG + Y++V D D +NLGN ISV E+ + G K
Sbjct: 201 --DGRQRKSYLYVSDCVDAMLLAWEKSTEGVNIFNLGNDDTISVNEIAEIVIEELGLKPR 258
Query: 280 IKF-CPRR--VGDATAVYAATDKAHKELGWKPKYGIE 313
K+ R GD + +K K LGWKP+Y E
Sbjct: 259 FKYSGGDRGWKGDVPYMRLDIEKL-KALGWKPRYNSE 294
|
UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup is comprised of archaeal and bacterial proteins, and has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 305 |
| >gnl|CDD|212494 cd08946, SDR_e, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 137 bits (348), Expect = 2e-39
Identities = 73/256 (28%), Positives = 114/256 (44%), Gaps = 62/256 (24%)
Query: 7 ILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGD 66
ILVTGGAGFIG+H +LL+ G +VV+ID
Sbjct: 1 ILVTGGAGFIGSHLVRRLLERGHEVVVIDR------------------------------ 30
Query: 67 LRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKK 126
+ V+H AL V S +P F+ N++GT+NL +A K K+
Sbjct: 31 ---------------LDVVVHLAALVGVPASWDNPDEDFETNVVGTLNLLEAARKAGVKR 75
Query: 127 LVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKADPEWRIILLRYFN 186
V++SSA++YG PE +P E+ P ++PYG +K E + ++ +++LR N
Sbjct: 76 FVYASSASVYGSPEGLPEEEETPPRPLSPYGVSKLAAEHLLRSYGESY-GLPVVILRLAN 134
Query: 187 PVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAVRDYIHVMDL 246
G + +L G+ N+ I++ G+ L V+G G+ RD+IHV D+
Sbjct: 135 VYGPGQRPRL----DGVVNDF---IRRALEGK--PLTVFG------GGNQTRDFIHVDDV 179
Query: 247 ADGCIAYNLGNGKGIS 262
I + L N
Sbjct: 180 VR-AILHALENPLEGG 194
|
Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 200 |
| >gnl|CDD|187567 cd05257, Arna_like_SDR_e, Arna decarboxylase_like, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 132 bits (335), Expect = 2e-36
Identities = 96/346 (27%), Positives = 151/346 (43%), Gaps = 55/346 (15%)
Query: 6 NILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVG 65
N+LVTG GFIG+H +LL+ G +V +D ++NS L + + F G
Sbjct: 1 NVLVTGADGFIGSHLTERLLREGHEVRALD-IYNS-----FNSWGLLDNAVHDRFHFISG 54
Query: 66 DLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCK 125
D+R+ +++ L K + V H AL A+ S P Y + N+ GT+N+ +A K
Sbjct: 55 DVRDASEVEYLVK--KCDVVFHLAALIAIPYSYTAPLSYVETNVFGTLNVLEAACVLYRK 112
Query: 126 KLVFSSSATIYG--QPEKIPCVEDFPYGAMN----PYGRTKQWCEEIAFDVQKAD--PEW 177
++V +S++ +YG Q I ED P +N PY +KQ + +A+ ++ P
Sbjct: 113 RVVHTSTSEVYGTAQDVPID--EDHPLLYINKPRSPYSASKQGADRLAYSYGRSFGLPVT 170
Query: 178 RIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAV 237
++R FN G +S IP I Q A+G+ +N+ DGS
Sbjct: 171 ---IIRPFNTYGPRQS-----ARAVIPT----IISQRAIGQ-RLINL-------GDGSPT 210
Query: 238 RDYIHVMDLADGCIA-----------YNLGNGKGISVLEM-VAAFEKASGKKIPIKFCPR 285
RD+ V D A G I N G+G+ IS+ V + G+ + I +
Sbjct: 211 RDFNFVKDTARGFIDILDAIEAVGEIINNGSGEEISIGNPAVELIVEELGEMVLIVYDDH 270
Query: 286 RV-----GDATAVYAATDKAHKELGWKPKYGIEDMCAHQWNWAKNN 326
R + KA + LGW+PKY + D W K+
Sbjct: 271 REYRPGYSEVERRIPDIRKAKRLLGWEPKYSLRDGLRETIEWFKDQ 316
|
Decarboxylase domain of ArnA. ArnA, is an enzyme involved in the modification of outer membrane protein lipid A of gram-negative bacteria. It is a bifunctional enzyme that catalyzes the NAD-dependent decarboxylation of UDP-glucuronic acid and N-10-formyltetrahydrofolate-dependent formylation of UDP-4-amino-4-deoxy-l-arabinose; its NAD-dependent decaboxylating activity is in the C-terminal 360 residues. This subgroup belongs to the extended SDR family, however the NAD binding motif is not a perfect match and the upstream Asn of the canonical active site tetrad is not conserved. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 316 |
| >gnl|CDD|206121 pfam13950, Epimerase_Csub, UDP-glucose 4-epimerase C-term subunit | Back alignment and domain information |
|---|
Score = 117 bits (295), Expect = 2e-33
Identities = 37/62 (59%), Positives = 40/62 (64%)
Query: 269 AFEKASGKKIPIKFCPRRVGDATAVYAATDKAHKELGWKPKYGIEDMCAHQWNWAKNNPM 328
AFEKASGKKIP + PRR GD YA KA KELGWK + G+EDMC W W NP
Sbjct: 1 AFEKASGKKIPYEIVPRRPGDVAECYADPSKAEKELGWKAERGLEDMCRDSWRWQSKNPN 60
Query: 329 GY 330
GY
Sbjct: 61 GY 62
|
This domain is the very C-terminal subunit of UDP-glucose 4-epimerase. Length = 62 |
| >gnl|CDD|187568 cd05258, CDP_TE_SDR_e, CDP-tyvelose 2-epimerase, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 125 bits (316), Expect = 2e-33
Identities = 89/355 (25%), Positives = 154/355 (43%), Gaps = 70/355 (19%)
Query: 7 ILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGD 66
+L+TGGAGFIG++ A L+ G++V+ DNL + + L + F GD
Sbjct: 3 VLITGGAGFIGSNLARFFLKQGWEVIGFDNL--MRRGSFGNLAWLKANREDGGVRFVHGD 60
Query: 67 LRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKK 126
+RN++DL+ LF + +IH A +V S P F+ N +GT+N+ +A ++
Sbjct: 61 IRNRNDLEDLFED--IDLIIHTAAQPSVTTSASSPRLDFETNALGTLNVLEAARQHAPNA 118
Query: 127 -LVFSSSATIYG-QPEKIPCV-------------------EDFPY-GAMNPYGRTK---- 160
+F+S+ +YG P +P E FP + + YG +K
Sbjct: 119 PFIFTSTNKVYGDLPNYLPLEELETRYELAPEGWSPAGISESFPLDFSHSLYGASKGAAD 178
Query: 161 QWCEEIA--FDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGR 218
Q+ +E F + + ++ R G + G ED +G + + AV
Sbjct: 179 QYVQEYGRIFGL-------KTVVFRCGCLTGPRQFGT--ED-QGWVAYFL----KCAVTG 224
Query: 219 HPELNVYGQDYPTKDGSAVRDYIHVMDLAD------------GCIAYNLGNGKG--ISVL 264
P L ++G G VRD +H DL + +N+G G+ +S+L
Sbjct: 225 KP-LTIFGY-----GGKQVRDVLHSADLVNLYLRQFQNPDRRKGEVFNIGGGRENSVSLL 278
Query: 265 EMVAAFEKASGKKIPIKFCPRRVGDATAVYAATDKAHKELGWKPKY----GIEDM 315
E++A E+ +G+K+ R GD + K ++ GWKP+ + ++
Sbjct: 279 ELIALCEEITGRKMESYKDENRPGDQIWYISDIRKIKEKPGWKPERDPREILAEI 333
|
CDP-tyvelose 2-epimerase is a tetrameric SDR that catalyzes the conversion of CDP-D-paratose to CDP-D-tyvelose, the last step in tyvelose biosynthesis. This subgroup is a member of the extended SDR subfamily, with a characteristic active site tetrad and NAD-binding motif. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 337 |
| >gnl|CDD|187557 cd05246, dTDP_GD_SDR_e, dTDP-D-glucose 4,6-dehydratase, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 123 bits (312), Expect = 7e-33
Identities = 94/343 (27%), Positives = 147/343 (42%), Gaps = 49/343 (14%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGG--FKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEF 62
ILVTGGAGFIG++ LL +K++ +D L +++L + + F
Sbjct: 1 MKILVTGGAGFIGSNFVRYLLNKYPDYKIINLDKL-----TYAGNLENLEDVSSSPRYRF 55
Query: 63 HVGDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKY 122
GD+ + + +D+LF +K +AVIHF A V S+ P + N++GT L +A KY
Sbjct: 56 VKGDICDAELVDRLFEEEKIDAVIHFAAESHVDRSISDPEPFIRTNVLGTYTLLEAARKY 115
Query: 123 NCKKLVFSSSATIYGQ-PEKIPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKADPEWR--- 178
K+ V S+ +YG + E P +PY +K + + V+ R
Sbjct: 116 GVKRFVHISTDEVYGDLLDDGEFTETSPLAPTSPYSASKAAADLL---VRAY---HRTYG 169
Query: 179 --IILLRYFNPVGAHESGKLGEDPKGIPNNLMP-YIQQVAVGRHPELNVYGQDYPTKDGS 235
+++ R N G P P L+P +I G+ L +YG DG
Sbjct: 170 LPVVITRCSNNYG----------PYQFPEKLIPLFILNALDGKP--LPIYG------DGL 211
Query: 236 AVRDYIHVMDLADG--CIA--------YNLGNGKGISVLEMVAAFEKASGKKIP-IKFCP 284
VRD+++V D A + YN+G G ++ LE+V + GK I +
Sbjct: 212 NVRDWLYVEDHARAIELVLEKGRVGEIYNIGGGNELTNLELVKLILELLGKDESLITYVK 271
Query: 285 RRVGDATAVYAATDKAHKELGWKPKYGIEDMCAHQWNWAKNNP 327
R G + K +ELGW+PK E+ W N
Sbjct: 272 DRPGHDRRYAIDSSKIRRELGWRPKVSFEEGLRKTVRWYLENR 314
|
This subgroup contains dTDP-D-glucose 4,6-dehydratase and related proteins, members of the extended-SDR family, with the characteristic Rossmann fold core region, active site tetrad and NAD(P)-binding motif. dTDP-D-glucose 4,6-dehydratase is closely related to other sugar epimerases of the SDR family. dTDP-D-dlucose 4,6,-dehydratase catalyzes the second of four steps in the dTDP-L-rhamnose pathway (the dehydration of dTDP-D-glucose to dTDP-4-keto-6-deoxy-D-glucose) in the synthesis of L-rhamnose, a cell wall component of some pathogenic bacteria. In many gram negative bacteria, L-rhamnose is an important constituent of lipopoylsaccharide O-antigen. The larger N-terminal portion of dTDP-D-Glucose 4,6-dehydratase forms a Rossmann fold NAD-binding domain, while the C-terminus binds the sugar substrate. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 315 |
| >gnl|CDD|187541 cd05230, UGD_SDR_e, UDP-glucuronate decarboxylase (UGD) and related proteins, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 116 bits (293), Expect = 2e-30
Identities = 86/327 (26%), Positives = 140/327 (42%), Gaps = 49/327 (14%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHV 64
K IL+TGGAGF+G+H +LL+ G +V+ +DN ++ L G EF
Sbjct: 1 KRILITGGAGFLGSHLCDRLLEDGHEVICVDNFFTGRKR---NIEHLIGHP---NFEFIR 54
Query: 65 GDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNC 124
D+ + + + H + +P + N++GT+N+ +AK
Sbjct: 55 HDVTE-------PLYLEVDQIYHLACPASPVHYQYNPIKTLKTNVLGTLNMLG-LAKRVG 106
Query: 125 KKLVFSSSATIYGQPEKIPCVEDFPYGAMNP------YGRTKQWCEEIAFDVQKADP-EW 177
+++ +S++ +YG PE P E + +G +NP Y K+ E + + +
Sbjct: 107 ARVLLASTSEVYGDPEVHPQPESY-WGNVNPIGPRSCYDEGKRVAETLCMAYHRQHGVDV 165
Query: 178 RIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAV 237
RI R FN G D + + N +I Q G + VYG DG+
Sbjct: 166 RIA--RIFNTYG---PRMHPNDGRVVSN----FIVQALRGE--PITVYG------DGTQT 208
Query: 238 RDYIHVMDLADGCIA----------YNLGNGKGISVLEMVAAFEKASGKKIPIKFCPRRV 287
R + +V DL +G I NLGN + ++LE+ +K +G K I F P
Sbjct: 209 RSFQYVSDLVEGLIRLMNSDYFGGPVNLGNPEEFTILELAELVKKLTGSKSEIVFLPLPE 268
Query: 288 GDATAVYAATDKAHKELGWKPKYGIED 314
D KA + LGW+PK +E+
Sbjct: 269 DDPKRRRPDISKAKELLGWEPKVPLEE 295
|
UGD catalyzes the formation of UDP-xylose from UDP-glucuronate; it is an extended-SDR, and has the characteristic glycine-rich NAD-binding pattern, TGXXGXXG, and active site tetrad. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 305 |
| >gnl|CDD|200431 TIGR04180, EDH_00030, NAD dependent epimerase/dehydratase, LLPSF_EDH_00030 family | Back alignment and domain information |
|---|
Score = 113 bits (285), Expect = 3e-29
Identities = 90/330 (27%), Positives = 146/330 (44%), Gaps = 58/330 (17%)
Query: 7 ILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVP-----EAVDRVKDLAGPELAKKLE 61
+LVTG GFIG+H L++ G++V L+NS + PE+ K+E
Sbjct: 1 VLVTGADGFIGSHLVEALVRQGYEVRAF-VLYNSFNSWGWLDTSP-------PEVKDKIE 52
Query: 62 FHVGDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAK 121
GD+R+ D + K + + + V H AL A+ S P Y D N+ GT+N+ QA
Sbjct: 53 VVTGDIRDPDSVRK--AMKGCDVVFHLAALIAIPYSYIAPDSYVDTNVTGTLNVLQAARD 110
Query: 122 YNCKKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKADPEWR--- 178
+K+V +S++ +YG + +P E P +PY +K I D Q A +R
Sbjct: 111 LGVEKVVHTSTSEVYGTAQYVPIDEKHPLQGQSPYSASK-----IGAD-QLALSFYRSFN 164
Query: 179 --IILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSA 236
+ ++R FN G +S + IP I Q+A G+ + + G PT
Sbjct: 165 TPVTIIRPFNTYGPRQSAR-----AVIPT----IITQIASGK-RRIKL-GSLSPT----- 208
Query: 237 VRDYIHVMDLADGCIA-----------YNLGNGKGISVLEMVAAFEKASGKKIPIKFCPR 285
RD+ +V D G IA N+G+ IS+ + V + G ++ I+
Sbjct: 209 -RDFNYVTDTVRGFIAIAESDKTVGEVINIGSNFEISIGDTVKLIAEIMGSEVEIETDEE 267
Query: 286 RVGDATA----VYAATDKAHKELGWKPKYG 311
R+ + ++ K + GW+PKY
Sbjct: 268 RLRPEKSEVERLWCDNSKIKELTGWQPKYS 297
|
This clade within the NAD dependent epimerase/dehydratase superfamily (pfam01370) is characterized by inclusion of its members within a cassette of seven distinctive enzymes. These include four genes homologous to the elements of the neuraminic (sialic) acid biosynthesis cluster (NeuABCD), an aminotransferase and a nucleotidyltransferase in addition to the epimerase/dehydratase. Together it is very likely that these enzymes direct the biosynthesis of a nine-carbon sugar analagous to CMP-neuraminic acid. These seven genes form the core of the cassette, although they are often accompanied by additional genes that may further modify the product sugar. Although this cassette is widely distributed in bacteria, the family nomenclature arises from the instance in Leptospira interrogans serovar Lai, str. 56601, where it appears as the 30th gene in the 91-gene lipopolysaccharide biosynthesis cluster. Length = 297 |
| >gnl|CDD|187570 cd05260, GDP_MD_SDR_e, GDP-mannose 4,6 dehydratase, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 113 bits (284), Expect = 6e-29
Identities = 79/328 (24%), Positives = 134/328 (40%), Gaps = 42/328 (12%)
Query: 6 NILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVG 65
L+TG G G++ A LL+ G++V I + S DR+ L + ++ H G
Sbjct: 1 RALITGITGQDGSYLAEFLLEKGYEVHGI--VRRSSSFNTDRIDHLYINK--DRITLHYG 56
Query: 66 DLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCK 125
DL + L + + + + H A V S P + N +GT+NL +A+
Sbjct: 57 DLTDSSSLRRAIEKVRPDEIYHLAAQSHVKVSFDDPEYTAEVNAVGTLNLLEAIRILGLD 116
Query: 126 -KLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKADPEWRIILLRY 184
+ +SS+ YG+ +++P E P+ +PY +K + + I + ++A + R
Sbjct: 117 ARFYQASSSEEYGKVQELPQSETTPFRPRSPYAVSKLYADWITRNYREAYG-LFAVNGRL 175
Query: 185 FNPVGAHESGKLGED--PKGIPNNLMPYIQQVAVGRHPEL---NVYGQDYPTKDGSAVRD 239
FN HE + GE + I + ++ G P L N+ A RD
Sbjct: 176 FN----HEGPRRGETFVTRKITRQVA----RIKAGLQPVLKLGNL----------DAKRD 217
Query: 240 YIHVMDLADGCI---------AYNLGNGKGISVLEMV-AAFEKASGKKIPI-KFCPRRV- 287
+ D + Y + G+ SV E V AFE++ + PR
Sbjct: 218 WGDARDYVEAYWLLLQQGEPDDYVIATGETHSVREFVELAFEESGLTGDIEVEIDPRYFR 277
Query: 288 -GDATAVYAATDKAHKELGWKPKYGIED 314
+ + KA +ELGWKP+ E+
Sbjct: 278 PTEVDLLLGDPSKAREELGWKPEVSFEE 305
|
GDP-mannose 4,6 dehydratase, a homodimeric SDR, catalyzes the NADP(H)-dependent conversion of GDP-(D)-mannose to GDP-4-keto, 6-deoxy-(D)-mannose in the fucose biosynthesis pathway. These proteins have the canonical active site triad and NAD-binding pattern, however the active site Asn is often missing and may be substituted with Asp. A Glu residue has been identified as an important active site base. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 316 |
| >gnl|CDD|187559 cd05248, ADP_GME_SDR_e, ADP-L-glycero-D-mannoheptose 6-epimerase (GME), extended (e) SDRs | Back alignment and domain information |
|---|
Score = 107 bits (270), Expect = 5e-27
Identities = 78/330 (23%), Positives = 145/330 (43%), Gaps = 43/330 (13%)
Query: 7 ILVTGGAGFIGTHCALQLLQGGF-KVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVG 65
I+VTGGAGFIG++ L + G ++++DNL N ++ K+L G ++A ++
Sbjct: 2 IIVTGGAGFIGSNLVKALNERGITDILVVDNLSNG-----EKFKNLVGLKIADYIDKD-- 54
Query: 66 DLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYF-DNNLIGTINLYQAMAKYNC 124
D + D + K + K EA+ H GA E+ +Y DNN T L +
Sbjct: 55 DFK--DWVRKGDENFKIEAIFHQGACSDTTETDG---KYMMDNNYQYTKELLHYCLEKKI 109
Query: 125 KKLVFSSSATIYG--QPEKIPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKADPEWRIILL 182
+ +++SSA +YG +E +N YG +K ++ A + +++ L
Sbjct: 110 -RFIYASSAAVYGNGSLGFAEDIETPNLRPLNVYGYSKLLFDQWARR-HGKEVLSQVVGL 167
Query: 183 RYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAVRDYIH 242
RYFN G E K + +L I+ ++ ++ DG +RD+++
Sbjct: 168 RYFNVYGPREYHK--GRMASVVFHLFNQIKA-----GEKVKLFKSSDGYADGEQLRDFVY 220
Query: 243 VMDLADGCIA----------YNLGNGKGISVLEMVAAFEKASGKKIPIKF--CPRRVGDA 290
V D+ + +N+G G+ S ++ +A KA GK++ I++ P +
Sbjct: 221 VKDVVKVNLFFLENPSVSGIFNVGTGRARSFNDLASATFKALGKEVKIEYIDFPEDLRGK 280
Query: 291 TAVYAATDKAHK-ELGWKPKY-----GIED 314
+ D + G+ ++ G++D
Sbjct: 281 YQSFTEADISKLRAAGYTKEFHSLEEGVKD 310
|
This subgroup contains ADP-L-glycero-D-mannoheptose 6-epimerase, an extended SDR, which catalyzes the NAD-dependent interconversion of ADP-D-glycero-D-mannoheptose and ADP-L-glycero-D-mannoheptose. This subgroup has the canonical active site tetrad and NAD(P)-binding motif. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 317 |
| >gnl|CDD|233775 TIGR02197, heptose_epim, ADP-L-glycero-D-manno-heptose-6-epimerase | Back alignment and domain information |
|---|
Score = 101 bits (253), Expect = 1e-24
Identities = 78/292 (26%), Positives = 125/292 (42%), Gaps = 37/292 (12%)
Query: 7 ILVTGGAGFIGTHCALQLLQGGFKVVLI-DNLHNSVPEAVDRVKDLAGPELAKKLEFHVG 65
I+VTGGAGFIG++ L + G +L+ DNL + + +LA +A
Sbjct: 1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDG-----HKFLNLADLVIA-------D 48
Query: 66 DLRNKDDLDKLFSS--QKFEAVIHFGALKAVAESVQHPFRY-FDNNLIGTINLYQAMAKY 122
+ +D LD+L K EA+ H GA E+ Y +NN + L A+
Sbjct: 49 YIDKEDFLDRLEKGAFGKIEAIFHQGACSDTTETDG---EYMMENNYQYSKRLLDWCAEK 105
Query: 123 NCKKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQWCEEIAFD-VQKADPEWRIIL 181
+++SSA YG E +N YG +K ++ V +++
Sbjct: 106 G-IPFIYASSAATYGDGEAGFREGRELERPLNVYGYSKFLFDQYVRRRVLPEALSAQVVG 164
Query: 182 LRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAVRDYI 241
LRYFN G E K + +L Q+ G + +L + + KDG +RD++
Sbjct: 165 LRYFNVYGPREYHK--GKMASVAFHLF---NQIKAGGNVKLFKSSEGF--KDGEQLRDFV 217
Query: 242 HVMDLADGCI---------AYNLGNGKGISVLEMVAAFEKASGKKIPIKFCP 284
+V D+ D + +NLG G+ S ++ A KA GK I++ P
Sbjct: 218 YVKDVVDVNLWLLENGVSGIFNLGTGRARSFNDLADAVFKALGKDEKIEYIP 269
|
This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370) [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. Length = 314 |
| >gnl|CDD|224013 COG1088, RfbB, dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Score = 100 bits (252), Expect = 3e-24
Identities = 100/352 (28%), Positives = 147/352 (41%), Gaps = 63/352 (17%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGG--FKVVLIDNL-HNSVPEAVDRVKDLAGPELAKKLE 61
ILVTGGAGFIG++ +L VV +D L + E + V+D +
Sbjct: 1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADVEDSP------RYR 54
Query: 62 FHVGDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAK 121
F GD+ +++ +D+LF + +AV+HF A V S+ P + N++GT L +A K
Sbjct: 55 FVQGDICDRELVDRLFKEYQPDAVVHFAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARK 114
Query: 122 YNCK-KLVFSSSATIYG-QPEKIPCV-EDFPYGAMNPYGRTKQWCEEIAFDVQKADPEWR 178
Y K + S+ +YG E PY +PY +K + + +A +
Sbjct: 115 YWGKFRFHHISTDEVYGDLGLDDDAFTETTPYNPSSPYSASKAASDLLV----RA---YV 167
Query: 179 ------IILLRYFNPVGA-HESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPT 231
+ R N G KL P I N L+ G+ L VYG
Sbjct: 168 RTYGLPATITRCSNNYGPYQFPEKL--IPLMIINALL--------GKP--LPVYG----- 210
Query: 232 KDGSAVRDYIHVMD--------LADGCIA--YNLGNGKGISVLEMVAAFEKASGKKIP-- 279
DG +RD+++V D L G I YN+G G + LE+V + GK P
Sbjct: 211 -DGLQIRDWLYVEDHCRAIDLVLTKGKIGETYNIGGGNERTNLEVVKTICELLGKDKPDY 269
Query: 280 ---IKFCPRRVG-DATAVYAAT-DKAHKELGWKPKYGIEDMCAHQWNWAKNN 326
I F R G D YA K +ELGW+P+ E +W +N
Sbjct: 270 RDLITFVEDRPGHDRR--YAIDASKIKRELGWRPQETFETGLRKTVDWYLDN 319
|
Length = 340 |
| >gnl|CDD|130249 TIGR01181, dTDP_gluc_dehyt, dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Score = 97.5 bits (243), Expect = 4e-23
Identities = 95/342 (27%), Positives = 147/342 (42%), Gaps = 50/342 (14%)
Query: 6 NILVTGGAGFIGTHCALQLLQ--GGFKVVLIDNL-HNSVPEAVDRVKDLAGPELAKKLEF 62
ILVTGGAGFIG++ +L +V+++D L + E + ++D + F
Sbjct: 1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLEDNP------RYRF 54
Query: 63 HVGDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKY 122
GD+ +++ + +LF+ + +AV+HF A V S+ P + + N++GT L +A+ KY
Sbjct: 55 VKGDIGDRELVSRLFTEHQPDAVVHFAAESHVDRSISGPAAFIETNVVGTYTLLEAVRKY 114
Query: 123 NCK-KLVFSSSATIYGQPEKIPC-VEDFPYGAMNPYGRTKQWCEEIAFDVQKADPEWRII 180
+ + S+ +YG EK E P +PY +K +D R
Sbjct: 115 WHEFRFHHISTDEVYGDLEKGDAFTETTPLAPSSPYSASK----------AASDHLVRAY 164
Query: 181 LLRYFNPVG-AHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAVRD 239
Y P S G P P L+P + A+ P L VYG DG VRD
Sbjct: 165 HRTYGLPALITRCSNNYG--PYQFPEKLIPLMITNALAGKP-LPVYG------DGQQVRD 215
Query: 240 YIHVMD--------LADGCIA--YNLGNGKGISVLEMVAAFEKASGK-KIPIKFCPRRVG 288
+++V D L G + YN+G G + LE+V + GK + I R G
Sbjct: 216 WLYVEDHCRAIYLVLEKGRVGETYNIGGGNERTNLEVVETILELLGKDEDLITHVEDRPG 275
Query: 289 DATAVYAATDKAHKELGWKPKYGIEDMCA--------HQWNW 322
K +ELGW PKY E+ ++W W
Sbjct: 276 HDRRYAIDASKIKRELGWAPKYTFEEGLRKTVQWYLDNEWWW 317
|
This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. Length = 317 |
| >gnl|CDD|165812 PLN02166, PLN02166, dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Score = 93.5 bits (232), Expect = 3e-21
Identities = 89/339 (26%), Positives = 145/339 (42%), Gaps = 78/339 (23%)
Query: 7 ILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGD 66
I+VTGGAGF+G+H +L+ G +V++IDN F G
Sbjct: 123 IVVTGGAGFVGSHLVDKLIGRGDEVIVIDN-------------------------FFTG- 156
Query: 67 LRNKDDLDKLFSSQKFEAVIH------------FGALKAVAESVQH---PFRYFDNNLIG 111
K++L LF + +FE + H L A V + P + N++G
Sbjct: 157 --RKENLVHLFGNPRFELIRHDVVEPILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMG 214
Query: 112 TINLYQAMAKYNCKKLVFSSSATIYGQPEKIPCVEDFPYGAMNP------YGRTKQWCEE 165
T+N+ +AK + + +S++ +YG P + P E + +G +NP Y K+ E
Sbjct: 215 TLNML-GLAKRVGARFLLTSTSEVYGDPLEHPQKETY-WGNVNPIGERSCYDEGKRTAET 272
Query: 166 IAFDVQK-ADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNV 224
+A D + A E RI R FN G ++ D + +N ++ Q + + P + V
Sbjct: 273 LAMDYHRGAGVEVRIA--RIFNTYGP----RMCLDDGRVVSN---FVAQ-TIRKQP-MTV 321
Query: 225 YGQDYPTKDGSAVRDYIHVMDLADGCIA---------YNLGNGKGISVLEMVAAFEKASG 275
YG DG R + +V DL DG +A +NLGN ++LE+ ++
Sbjct: 322 YG------DGKQTRSFQYVSDLVDGLVALMEGEHVGPFNLGNPGEFTMLELAEVVKETID 375
Query: 276 KKIPIKFCPRRVGDATAVYAATDKAHKELGWKPKYGIED 314
I+F P D KA + L W+PK + +
Sbjct: 376 SSATIEFKPNTADDPHKRKPDISKAKELLNWEPKISLRE 414
|
Length = 436 |
| >gnl|CDD|187562 cd05252, CDP_GD_SDR_e, CDP-D-glucose 4,6-dehydratase, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 92.0 bits (229), Expect = 4e-21
Identities = 82/359 (22%), Positives = 137/359 (38%), Gaps = 55/359 (15%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHV 64
K +LVTG GF G+ +L L + G KV+ + P + L K+
Sbjct: 5 KRVLVTGHTGFKGSWLSLWLQELGAKVIGYSLDPPTNPNLFELA------NLDNKISSTR 58
Query: 65 GDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNC 124
GD+R+ + L + + E V H A V S + P F+ N++GT+NL +A+ +
Sbjct: 59 GDIRDLNALREAIREYEPEIVFHLAAQPLVRLSYKDPVETFETNVMGTVNLLEAIRETGS 118
Query: 125 -KKLVFSSSATIYGQPEKI-PCVEDFPYGAMNPYGRTKQWCEEIA-------FDVQKADP 175
K +V +S Y E E+ P G +PY +K E I F+ +
Sbjct: 119 VKAVVNVTSDKCYENKEWGWGYRENDPLGGHDPYSSSKGCAELIISSYRNSFFNPENYGK 178
Query: 176 E-WRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDG 234
I R N +G G ED + +P+ I+ G + ++
Sbjct: 179 HGIAIASARAGNVIGG---GDWAED-RIVPD----CIRAFEAGERVII---------RNP 221
Query: 235 SAVRDYIHVMDLADG---------------CIAYNLGNG--KGISVLEMVAAFEKASG-K 276
+A+R + HV++ G A+N G ++VLE+V A + G
Sbjct: 222 NAIRPWQHVLEPLSGYLLLAEKLYERGEEYAEAWNFGPDDEDAVTVLELVEAMARYWGED 281
Query: 277 KIPIKFCPRRVGDATAVYAATDKAHKELGWKPKYGIEDMCAHQWNWAKNNPMGYQTKRT 335
+A + KA LGW+P++ +E+ W K + +
Sbjct: 282 ARWDLDGNSHPHEANLLKLDCSKAKTMLGWRPRWNLEETLEFTVAWYKE----WLSGED 336
|
This subgroup contains CDP-D-glucose 4,6-dehydratase, an extended SDR, which catalyzes the conversion of CDP-D-glucose to CDP-4-keto-6-deoxy-D-glucose. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 336 |
| >gnl|CDD|187548 cd05237, UDP_invert_4-6DH_SDR_e, UDP-Glcnac (UDP-linked N-acetylglucosamine) inverting 4,6-dehydratase, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 89.6 bits (223), Expect = 1e-20
Identities = 76/308 (24%), Positives = 124/308 (40%), Gaps = 67/308 (21%)
Query: 3 SEKNILVTGGAGFIGTHCALQLLQGG-FKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLE 61
K ILVTGGAG IG+ Q+L+ G K+++ D N + V++L KL
Sbjct: 1 KGKTILVTGGAGSIGSELVRQILKFGPKKLIVFDRDENK---LHELVRELRSRFPHDKLR 57
Query: 62 FHVGDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAK 121
F +GD+R+K+ L + F + + V H ALK V +P N++GT N+ A +
Sbjct: 58 FIIGDVRDKERLRRAFKERGPDIVFHAAALKHVPSMEDNPEEAIKTNVLGTKNVIDAAIE 117
Query: 122 YNCKKLVFSSSATIYGQPEKIPCVEDFPYGAMNP---YGRTKQWCEEIAFDVQKADPEWR 178
+K V S+ +K A+NP G TK+ E++ + +
Sbjct: 118 NGVEKFVCIST-------DK----------AVNPVNVMGATKRVAEKLLLAKNEYSSSTK 160
Query: 179 IILLRYFNPVGAHESGKLGEDPKGIPNNLMP-YIQQVAVGRHPELNVYGQDYPTKDGSAV 237
+R+ N +G+ S ++P + +Q+ G L V D +
Sbjct: 161 FSTVRFGNVLGSRGS-------------VLPLFKKQIKKGG--PLTVTDPD--------M 197
Query: 238 RDYIHVMDLADGC----IAYNLGNGKGISVLEM-------------VAAFEKASGKKIPI 280
+ M + + A LG+G GI +L+M + + IPI
Sbjct: 198 TRFF--MTIPEAVDLVLQACILGDGGGIFLLDMGPPVKILDLAEALIELLGYEPYEDIPI 255
Query: 281 KFCPRRVG 288
F R G
Sbjct: 256 FFTGLRPG 263
|
UDP-Glcnac inverting 4,6-dehydratase was identified in Helicobacter pylori as the hexameric flaA1 gene product (FlaA1). FlaA1 is hexameric, possesses UDP-GlcNAc-inverting 4,6-dehydratase activity, and catalyzes the first step in the creation of a pseudaminic acid derivative in protein glycosylation. Although this subgroup has the NADP-binding motif characteristic of extended SDRs, its members tend to have a Met substituted for the active site Tyr found in most SDR families. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 287 |
| >gnl|CDD|187581 cd05273, GME-like_SDR_e, Arabidopsis thaliana GDP-mannose-3',5'-epimerase (GME)-like, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 89.1 bits (221), Expect = 3e-20
Identities = 75/346 (21%), Positives = 127/346 (36%), Gaps = 55/346 (15%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHV 64
+ LVTG GFIG+H A +L G V D + EFH+
Sbjct: 1 QRALVTGAGGFIGSHLAERLKAEGHYVRGADWKSPEH-----------MTQPTDDDEFHL 49
Query: 65 GDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQ-HPFRYFDNNLIGTINLYQAMAKYN 123
DLR ++ K +++ + V H A +Q + NN + N+ +A
Sbjct: 50 VDLREMENCLK--ATEGVDHVFHLAADMGGMGYIQSNHAVIMYNNTLINFNMLEAARING 107
Query: 124 CKKLVFSSSATIYGQ-----PEKIPCVEDFPYGAMNP---YGRTKQWCEEI--AFDVQKA 173
++ +F+SSA +Y + + E+ + A P YG K E + ++ +
Sbjct: 108 VERFLFASSACVYPEFKQLETTVVRLREEDAWPA-EPQDAYGWEKLATERLCQHYN-EDY 165
Query: 174 DPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHP-ELNVYGQDYPTK 232
E RI+ R+ N G G G ++VA + ++G
Sbjct: 166 GIETRIV--RFHNIYGP-----RGTWDGGREKAPAAMCRKVATAKDGDRFEIWG------ 212
Query: 233 DGSAVRDYIHVMDLADGCI---------AYNLGNGKGISVLEMVAAFEKASGKKIPIKFC 283
DG R + ++ D +G NLG+ + +S+ E+ SGK + I
Sbjct: 213 DGLQTRSFTYIDDCVEGLRRLMESDFGEPVNLGSDEMVSMNELAEMVLSFSGKPLEII-- 270
Query: 284 PRRVGDATAV--YAA-TDKAHKELGWKPKYGIEDMCAHQWNWAKNN 326
V + +ELGW+P +E+ + W K
Sbjct: 271 -HHTPGPQGVRGRNSDNTLLKEELGWEPNTPLEEGLRITYFWIKEQ 315
|
This subgroup of NDP-sugar epimerase/dehydratases are extended SDRs; they have the characteristic active site tetrad, and an NAD-binding motif: TGXXGXX[AG], which is a close match to the canonical NAD-binding motif. Members include Arabidopsis thaliana GDP-mannose-3',5'-epimerase (GME) which catalyzes the epimerization of two positions of GDP-alpha-D-mannose to form GDP-beta-L-galactose. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 328 |
| >gnl|CDD|187549 cd05238, Gne_like_SDR_e, Escherichia coli Gne (a nucleoside-diphosphate-sugar 4-epimerase)-like, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 84.4 bits (209), Expect = 1e-18
Identities = 73/325 (22%), Positives = 118/325 (36%), Gaps = 39/325 (12%)
Query: 6 NILVTGGAGFIGTHCALQLLQGG--FKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFH 63
+L+TG +GF+G A +LL +++LID + P RV
Sbjct: 2 KVLITGASGFVGQRLAERLLSDVPNERLILIDVVSPKAPSGAPRVTQ------------I 49
Query: 64 VGDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYN 123
GDL ++ L + + + V H A+ + + + N+ GT NL +A+ K
Sbjct: 50 AGDLAVPALIEALANG-RPDVVFHLAAIVS-GGAEADFDLGYRVNVDGTRNLLEALRKNG 107
Query: 124 CK-KLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKADPEWRIILL 182
K + VF+SS +YG P P + + YG K CE + D + L
Sbjct: 108 PKPRFVFTSSLAVYGLPLPNPVTDHTALDPASSYGAQKAMCELLLNDYSRRGFVDGRTLR 167
Query: 183 RYFNPVGAHESGKLGEDPKGIPNNLMP-YIQQVAVGRHPELNVYGQD--YPTKDGSAVRD 239
P G+ P + I++ VG L V Q + +AV +
Sbjct: 168 L---PTVCVRPGR----PNKAASAFASTIIREPLVGEEAGLPVAEQLRYWLKSVATAVAN 220
Query: 240 YIH-VMDLADGCIAYNLGNGKGISVL--EMVAAFEKASGKKIP--IKFCP-----RRVGD 289
++H A+ G+SV E + A +G I F P R V
Sbjct: 221 FVHAAELPAEKFGPRRDLTLPGLSVTVGEELRALIPVAGLPALMLITFEPDEEIKRIVFG 280
Query: 290 ATAVYAATDKAHKELGWKPKYGIED 314
+ AT + LG+ +
Sbjct: 281 WPTRFDAT--RAQSLGFVADSSLAA 303
|
Nucleoside-diphosphate-sugar 4-epimerase has the characteristic active site tetrad and NAD-binding motif of the extended SDR, and is related to more specifically defined epimerases such as UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), which catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup includes Escherichia coli 055:H7 Gne, a UDP-GlcNAc 4-epimerase, essential for O55 antigen synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 305 |
| >gnl|CDD|185103 PRK15181, PRK15181, Vi polysaccharide biosynthesis protein TviC; Provisional | Back alignment and domain information |
|---|
Score = 83.6 bits (206), Expect = 4e-18
Identities = 83/338 (24%), Positives = 138/338 (40%), Gaps = 37/338 (10%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHV 64
K L+TG AGFIG+ +LL V+ +DN +D V+ E + F
Sbjct: 16 KRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQ 75
Query: 65 GDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNC 124
GD+R D K + + + V+H AL +V S++ P N+ G +N+ A +
Sbjct: 76 GDIRKFTDCQK--ACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHV 133
Query: 125 KKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKADPEWRIILLRY 184
+++S++ YG +P +E+ ++PY TK + E+ DV E+ I LRY
Sbjct: 134 SSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTK-YVNELYADVFARSYEFNAIGLRY 192
Query: 185 FNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAVRDYIHVM 244
FN G ++P G + ++P + P Y DGS RD+ ++
Sbjct: 193 FNVFGRR------QNPNGAYSAVIPRWILSLLKDEP-------IYINGDGSTSRDFCYIE 239
Query: 245 -------------DLADGCIAYNLGNGKGISVLEM-------VAAFEKASGKKIPIKFCP 284
DLA YN+ G S+ E+ + + + PI +
Sbjct: 240 NVIQANLLSATTNDLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPI-YKD 298
Query: 285 RRVGDATAVYAATDKAHKELGWKPKYGIEDMCAHQWNW 322
R GD A K L ++P++ I++ W
Sbjct: 299 FRDGDVKHSQADITKIKTFLSYEPEFDIKEGLKQTLKW 336
|
Length = 348 |
| >gnl|CDD|187673 cd09813, 3b-HSD-NSDHL-like_SDR_e, human NSDHL (NAD(P)H steroid dehydrogenase-like protein)-like, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 83.2 bits (206), Expect = 5e-18
Identities = 50/166 (30%), Positives = 76/166 (45%), Gaps = 22/166 (13%)
Query: 6 NILVTGGAGFIGTHCALQLLQ-GGFKVVLID--NLHNSVPEAVDRVKDLAGPELAKKLEF 62
+ LV GG+GF+G H QLL+ G V + D P + RV+ F
Sbjct: 1 SCLVVGGSGFLGRHLVEQLLRRGNPTVHVFDIRPTFELDPSSSGRVQ------------F 48
Query: 63 HVGDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKY 122
H GDL + DL+K F+ + V H + + + Y+ N+ GT N+ +A K
Sbjct: 49 HTGDLTDPQDLEKAFNEKGPNVVFHTAS----PDHGSNDDLYYKVNVQGTRNVIEACRKC 104
Query: 123 NCKKLVFSSSAT-IYGQPEKIPCVEDFPY--GAMNPYGRTKQWCEE 165
KKLV++SSA+ ++ + I E PY + Y TK E+
Sbjct: 105 GVKKLVYTSSASVVFNGQDIINGDESLPYPDKHQDAYNETKALAEK 150
|
This subgroup includes human NSDHL and related proteins. These proteins have the characteristic active site tetrad of extended SDRs, and also have a close match to their NAD(P)-binding motif. Human NSDHL is a 3beta-hydroxysteroid dehydrogenase (3 beta-HSD) which functions in the cholesterol biosynthetic pathway. 3 beta-HSD catalyzes the oxidative conversion of delta 5-3 beta-hydroxysteroids to the delta 4-3-keto configuration; this activity is essential for the biosynthesis of all classes of hormonal steroids. Mutations in the gene encoding NSDHL cause CHILD syndrome (congenital hemidysplasia with ichthyosiform nevus and limb defects), an X-linked dominant, male-lethal trait. This subgroup also includes an unusual bifunctional [3beta-hydroxysteroid dehydrogenase (3b-HSD)/C-4 decarboxylase from Arabidopsis thaliana, and Saccharomyces cerevisiae ERG26, a 3b-HSD/C-4 decarboxylase, involved in the synthesis of ergosterol, the major sterol of yeast. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 335 |
| >gnl|CDD|187552 cd05241, 3b-HSD-like_SDR_e, 3beta-hydroxysteroid dehydrogenases (3b-HSD)-like, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 82.9 bits (205), Expect = 5e-18
Identities = 84/367 (22%), Positives = 138/367 (37%), Gaps = 87/367 (23%)
Query: 6 NILVTGGAGFIGTHCALQLL-QGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHV 64
++LVTGG+GF G QLL +GG V D EA+ +EF
Sbjct: 1 SVLVTGGSGFFGERLVKQLLERGGTYVRSFDI--APPGEALSA----WQHP---NIEFLK 51
Query: 65 GDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNC 124
GD+ +++D+++ + + V H A+ Y++ N+ GT N+ A +
Sbjct: 52 GDITDRNDVEQ--ALSGADCVFH---TAAIVPLAGPRDLYWEVNVGGTQNVLDACQRCGV 106
Query: 125 KKLVFSSSATIY--GQPEKIPCVEDFPYGA--MNPYGRTKQWCEEIAFDVQKADPE--WR 178
+K V++SS+++ GQ E PY + Y TK E I V +A+
Sbjct: 107 QKFVYTSSSSVIFGGQNIHNGD-ETLPYPPLDSDMYAETKAIAEII---VLEANGRDDLL 162
Query: 179 IILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAVR 238
LR P G G L+P + + + V+G G+ +
Sbjct: 163 TCALR---PAGIFGPGD---------QGLVPILFE-WAEKGLVKFVFG------RGNNLV 203
Query: 239 DYIHVMDLADGCI---------------AYNLGNGKGISVLEMVAAFEKASG----KKIP 279
D+ +V +LA I Y + + + ++ E++ KA G KI
Sbjct: 204 DFTYVHNLAHAHILAAAALVKGKTISGQTYFITDAEPHNMFELLRPVWKALGFGSRPKIR 263
Query: 280 IK-----------------------FCPRRV-GDATAVYAATDKAHKELGWKPKYGIEDM 315
+ F P V T +Y + KA K+LG+ P+Y E+
Sbjct: 264 LSGPLAYCAALLSELVSFMLGPYFVFSPFYVRALVTPMYFSIAKAQKDLGYAPRYSNEEG 323
Query: 316 CAHQWNW 322
NW
Sbjct: 324 LIETLNW 330
|
Extended SDR family domains belonging to this subgroup have the characteristic active site tetrad and a fairly well-conserved NAD(P)-binding motif. 3b-HSD catalyzes the NAD-dependent conversion of various steroids, such as pregnenolone to progesterone, or androstenediol to testosterone. This subgroup includes an unusual bifunctional 3b-HSD/C-4 decarboxylase from Arabidopsis thaliana, and Saccharomyces cerevisiae ERG26, a 3b-HSD/C-4 decarboxylase, involved in the synthesis of ergosterol, the major sterol of yeast. It also includes human 3 beta-HSD/HSD3B1 and C(27) 3beta-HSD/ [3beta-hydroxy-delta(5)-C(27)-steroid oxidoreductase; HSD3B7]. C(27) 3beta-HSD/HSD3B7 is a membrane-bound enzyme of the endoplasmic reticulum, that catalyzes the isomerization and oxidation of 7alpha-hydroxylated sterol intermediates, an early step in bile acid biosynthesis. Mutations in the human NSDHL (NAD(P)H steroid dehydrogenase-like protein) cause CHILD syndrome (congenital hemidysplasia with ichthyosiform nevus and limb defects), an X-linked dominant, male-lethal trait. Mutations in the human gene encoding C(27) 3beta-HSD underlie a rare autosomal recessive form of neonatal cholestasis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 331 |
| >gnl|CDD|177856 PLN02206, PLN02206, UDP-glucuronate decarboxylase | Back alignment and domain information |
|---|
Score = 82.3 bits (203), Expect = 2e-17
Identities = 82/319 (25%), Positives = 142/319 (44%), Gaps = 48/319 (15%)
Query: 7 ILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGD 66
++VTGGAGF+G+H +L+ G V+++DN E V + + P +
Sbjct: 122 VVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKENV--MHHFSNPNF---------E 170
Query: 67 LRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKK 126
L D ++ + + + + H + +P + N++GT+N+ +AK +
Sbjct: 171 LIRHDVVEPIL--LEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNML-GLAKRVGAR 227
Query: 127 LVFSSSATIYGQPEKIPCVEDFPYGAMNP------YGRTKQWCEEIAFDVQK-ADPEWRI 179
+ +S++ +YG P + P VE + +G +NP Y K+ E + D + A+ E RI
Sbjct: 228 FLLTSTSEVYGDPLQHPQVETY-WGNVNPIGVRSCYDEGKRTAETLTMDYHRGANVEVRI 286
Query: 180 ILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAVRD 239
R FN G ++ D + +N ++ Q A+ + P L VYG DG R
Sbjct: 287 A--RIFNTYGP----RMCIDDGRVVSN---FVAQ-ALRKEP-LTVYG------DGKQTRS 329
Query: 240 YIHVMDLADGCI---------AYNLGNGKGISVLEMVAAFEKASGKKIPIKFCPRRVGDA 290
+ V DL +G + +NLGN ++LE+ ++ I+F P D
Sbjct: 330 FQFVSDLVEGLMRLMEGEHVGPFNLGNPGEFTMLELAKVVQETIDPNAKIEFRPNTEDDP 389
Query: 291 TAVYAATDKAHKELGWKPK 309
KA + LGW+PK
Sbjct: 390 HKRKPDITKAKELLGWEPK 408
|
Length = 442 |
| >gnl|CDD|187660 cd08957, WbmH_like_SDR_e, Bordetella bronchiseptica enzymes WbmH and WbmG-like, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 80.6 bits (199), Expect = 2e-17
Identities = 77/337 (22%), Positives = 136/337 (40%), Gaps = 62/337 (18%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHV 64
+L+TGGAG IG+H LL+ G +VV+IDN E + D L
Sbjct: 1 MKVLITGGAGQIGSHLIEHLLERGHQVVVIDNFATGRREH---LPDHPN------LTVVE 51
Query: 65 GDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDN---NLIGTINLYQAMAK 121
G + +K +DKLF K +AV+H A + + P ++++ N++G N+ QA K
Sbjct: 52 GSIADKALVDKLFGDFKPDAVVH------TAAAYKDPDDWYEDTLTNVVGGANVVQAAKK 105
Query: 122 YNCKKLVFSSSATIYG-QPEKIPCVEDFP-YGAMNPYGRTKQWCEEIAFDVQKADPEWRI 179
K+L++ +A YG +P + P D P + Y +K E +
Sbjct: 106 AGVKRLIYFQTALCYGLKPMQQPIRLDHPRAPPGSSYAISKTAGE--YYLELSGVD---F 160
Query: 180 ILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAVRD 239
+ R N G P+ + L + Q++ G+ + + T RD
Sbjct: 161 VTFRLANVTG----------PRNVIGPLPTFYQRLKAGK--------KCFVTD---TRRD 199
Query: 240 YIHVMDLA----------DGCIAYNLGNGKGISVLEMVAAFEKASG----KKIPIKFCPR 285
++ V DLA G AY+ +G+ +S+ E+ A +A ++ +
Sbjct: 200 FVFVKDLARVVDKALDGIRGHGAYHFSSGEDVSIKELFDAVVEALDLPLRPEVEVV--EL 257
Query: 286 RVGDATAVYAATDKAHKELGWKPKYGIEDMCAHQWNW 322
D ++ + ++ GWK + + + W
Sbjct: 258 GPDDVPSILLDPSRTFQDFGWKEFTPLSETVSAALAW 294
|
Bordetella bronchiseptica enzymes WbmH and WbmG, and related proteins. This subgroup exhibits the active site tetrad and NAD-binding motif of the extended SDR family. It has been proposed that the active site in Bordetella WbmG and WbmH cannot function as an epimerase, and that it plays a role in O-antigen synthesis pathway from UDP-2,3-diacetamido-2,3-dideoxy-l-galacturonic acid. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 307 |
| >gnl|CDD|187550 cd05239, GDP_FS_SDR_e, GDP-fucose synthetase, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 78.8 bits (195), Expect = 1e-16
Identities = 76/341 (22%), Positives = 123/341 (36%), Gaps = 85/341 (24%)
Query: 7 ILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGD 66
ILVTG G +G+ L + G++ V+ + K+L D
Sbjct: 2 ILVTGHRGLVGSAIVRVLARRGYENVV-------FRTS----KEL--------------D 36
Query: 67 LRNKDDLDKLFSSQKFEAVIHF----GALKAVAESVQHPFRYFDNNLIGTINLYQAMAKY 122
L +++ + F +K + VIH G + A +P + +NL+ N+ A ++
Sbjct: 37 LTDQEAVRAFFEKEKPDYVIHLAAKVGGIVANMT---YPADFLRDNLLINDNVIHAAHRF 93
Query: 123 NCKKLVFSSSATIYGQPEKIPCVEDF-----PYGAMNPYGRTKQWCEEIAFDVQ----KA 173
KKLVF S+ IY P E P Y K A +
Sbjct: 94 GVKKLVFLGSSCIYPDLAPQPIDESDLLTGPPEPTNEGYAIAK-----RAGLKLCEAYRK 148
Query: 174 DPEWRIILLRYFNPVGAHESGKLGEDPKG---IPNNLMPYIQQVAVGRHPELNVYGQDYP 230
I + N G H++ DP+ IP L+ + + E+ V+G
Sbjct: 149 QYGCDYISVMPTNLYGPHDNF----DPENSHVIP-ALIRKFHEAKLRGGKEVTVWG---- 199
Query: 231 TKDGSAVRDYIHVMDLADGCI----------AYNLGNGKGISVLEMVAAFEKASGKKIPI 280
G+ R++++ DLA + N+G+G IS+ E+ A + G K I
Sbjct: 200 --SGTPRREFLYSDDLARAIVFLLENYDEPIIVNVGSGVEISIRELAEAIAEVVGFKGEI 257
Query: 281 KF-------CPRRVGDATAVYAATDKAHKELGWKPKYGIED 314
F PR++ K LGW P +E
Sbjct: 258 VFDTSKPDGQPRKL-------LDVSKLRA-LGWFPFTPLEQ 290
|
GDP-fucose synthetase (aka 3, 5-epimerase-4-reductase) acts in the NADP-dependent synthesis of GDP-fucose from GDP-mannose. Two activities have been proposed for the same active site: epimerization and reduction. Proteins in this subgroup are extended SDRs, which have a characteristic active site tetrad and an NADP-binding motif, [AT]GXXGXXG, that is a close match to the archetypical form. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 300 |
| >gnl|CDD|224014 COG1089, Gmd, GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Score = 78.9 bits (195), Expect = 2e-16
Identities = 84/353 (23%), Positives = 145/353 (41%), Gaps = 53/353 (15%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHV 64
K L+TG G G++ A LL+ G++V I +S + + +L H
Sbjct: 3 KVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYED-PHLNDPRLHLHY 61
Query: 65 GDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNC 124
GDL + +L ++ + + + + A V S + P D + IGT+ L +A+
Sbjct: 62 GDLTDSSNLLRILEEVQPDEIYNLAAQSHVGVSFEQPEYTADVDAIGTLRLLEAIRILGE 121
Query: 125 KKLVF--SSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKADPEWRI--I 180
KK F +S++ +YG ++IP E P+ +PY K + I + +++ + I
Sbjct: 122 KKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYRESYGLFACNGI 181
Query: 181 LLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAVRDY 240
L FN HES GE + + + ++ +G +L + G +D +DY
Sbjct: 182 L---FN----HESPLRGET--FVTRKITRAVARIKLGLQDKLYL-GNLDAKRDWGHAKDY 231
Query: 241 IHVMDL---ADGCIAYNLGNGKGISVLEMV-AAFE------------------KASGKKI 278
+ M L + Y + G+ SV E V AFE A KI
Sbjct: 232 VEAMWLMLQQEEPDDYVIATGETHSVREFVELAFEMVGIDLEWEGTGVDEKGVDAKTGKI 291
Query: 279 PIKFCPRR---------VGDATAVYAATDKAHKELGWKPKYGIEDMCAHQWNW 322
++ PR +GD T KA ++LGW+P+ +E++
Sbjct: 292 IVEIDPRYFRPAEVDLLLGDPT-------KAKEKLGWRPEVSLEELVREMVEA 337
|
Length = 345 |
| >gnl|CDD|187551 cd05240, UDP_G4E_3_SDR_e, UDP-glucose 4 epimerase (G4E), subgroup 3, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 78.2 bits (193), Expect = 2e-16
Identities = 74/334 (22%), Positives = 119/334 (35%), Gaps = 71/334 (21%)
Query: 7 ILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGD 66
ILVTG AG +G + L +V+ +D +DR + P K+E+ D
Sbjct: 1 ILVTGAAGGLG-RLLARRLAASPRVIGVD--------GLDRRRPPGSPP---KVEYVRLD 48
Query: 67 LRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKK 126
+R +F ++ +AV+H + R+ N+ GT N+ A A +
Sbjct: 49 IR-DPAAADVFREREADAVVHLAF--ILDPPRDGAERH-RINVDGTQNVLDACAAAGVPR 104
Query: 127 LVFSSSATIYGQ--PEKIPCVEDFPYGAMNP---YGRTKQWCEEIAFDVQKADPEWRIIL 181
+V +SS +YG P ED P +P Y R K E++ + ++ PE + +
Sbjct: 105 VVVTSSVAVYGAHPDNPAPLTEDAP-LRGSPEFAYSRDKAEVEQLLAEFRRRHPELNVTV 163
Query: 182 LRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAVRDYI 241
LR +G N P G D P + ++
Sbjct: 164 LRPATILGPGTR------------NTTRDFLSPRRLPVP----GGFDPPFQ-------FL 200
Query: 242 HVMDLADGCIA---------YNLGNGKGISVLEMVAAFEKASGKKIPIKFCP-----RRV 287
H D+A + +N+ G G L +V A +P RR+
Sbjct: 201 HEDDVARALVLAVRAGATGIFNVA-GDGPVPLSLVLALLGRRPVPLPSPLPAALAAARRL 259
Query: 288 GDATA-----------VYAATDKAHKELGWKPKY 310
G T +A ELGW+PK+
Sbjct: 260 GLRPLPPEQLDFLQYPPVMDTTRARVELGWQPKH 293
|
Members of this bacterial subgroup are identified as possible sugar epimerases, such as UDP-glucose 4 epimerase. However, while the NAD(P)-binding motif is fairly well conserved, not all members retain the canonical active site tetrad of the extended SDRs. UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 306 |
| >gnl|CDD|224011 COG1086, COG1086, Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 76.2 bits (188), Expect = 3e-15
Identities = 54/195 (27%), Positives = 90/195 (46%), Gaps = 26/195 (13%)
Query: 1 MASEKNILVTGGAGFIGTHCALQLLQGGFK-VVLIDNLHNSVPEAVDRVKDLAGPELAKK 59
M + K +LVTGG G IG+ Q+L+ K ++L + +D +L K
Sbjct: 247 MLTGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKL-YLID--MELREKFPELK 303
Query: 60 LEFHVGDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAM 119
L F++GD+R++D +++ K + V H ALK V +P N++GT N+ +A
Sbjct: 304 LRFYIGDVRDRDRVERAMEGHKVDIVFHAAALKHVPLVEYNPEEAIKTNVLGTENVAEAA 363
Query: 120 AKYNCKKLVFSSSATIYGQPEKIPCVEDFPYGAMNP---YGRTKQWCEEI--AFDVQKAD 174
K KK V S+ +K A+NP G TK+ E++ A + +
Sbjct: 364 IKNGVKKFVLIST-------DK----------AVNPTNVMGATKRLAEKLFQAANRNVSG 406
Query: 175 PEWRIILLRYFNPVG 189
R ++R+ N +G
Sbjct: 407 TGTRFCVVRFGNVLG 421
|
Length = 588 |
| >gnl|CDD|215146 PLN02260, PLN02260, probable rhamnose biosynthetic enzyme | Back alignment and domain information |
|---|
Score = 75.9 bits (187), Expect = 4e-15
Identities = 91/355 (25%), Positives = 153/355 (43%), Gaps = 70/355 (19%)
Query: 5 KNILVTGGAGFIGTHCALQLLQG--GFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEF 62
KNIL+TG AGFI +H A +L++ +K+V++D L + +K+L + + +F
Sbjct: 7 KNILITGAAGFIASHVANRLIRNYPDYKIVVLDKL-----DYCSNLKNLNPSKSSPNFKF 61
Query: 63 HVGDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKY 122
GD+ + D ++ L ++ + ++HF A V S + F + NN+ GT L +A
Sbjct: 62 VKGDIASADLVNYLLITEGIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEA---- 117
Query: 123 NCK------KLVFSSSATIYGQPEKIPCVEDFPYGAM---NPYGRTKQWCEEI--AFDVQ 171
CK + + S+ +YG+ ++ V + + NPY TK E + A+
Sbjct: 118 -CKVTGQIRRFIHVSTDEVYGETDEDADVGNHEASQLLPTNPYSATKAGAEMLVMAYGRS 176
Query: 172 KADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPT 231
P +I R N G ++ P L+P +A+ P L ++G
Sbjct: 177 YGLP---VITTRGNNVYGPNQ----------FPEKLIPKFILLAMQGKP-LPIHG----- 217
Query: 232 KDGSAVRDYIHVMDLADG--CI--------AYNLGNGKGISVLEMVA-----AFEKASGK 276
DGS VR Y++ D+A+ + YN+G K V++ VA F K
Sbjct: 218 -DGSNVRSYLYCEDVAEAFEVVLHKGEVGHVYNIGTKKERRVID-VAKDICKLFGLDPEK 275
Query: 277 KIPI----KFCPRRVGDATAVYAATDKAHKELGWKPKYGIEDMCAHQWNWAKNNP 327
I F +R Y D+ K+LGW+ + E+ W +NP
Sbjct: 276 SIKFVENRPFNDQR-------YFLDDQKLKKLGWQERTSWEEGLKKTMEWYTSNP 323
|
Length = 668 |
| >gnl|CDD|187565 cd05255, SQD1_like_SDR_e, UDP_sulfoquinovose_synthase (Arabidopsis thaliana SQD1 and related proteins), extended (e) SDRs | Back alignment and domain information |
|---|
Score = 72.4 bits (178), Expect = 3e-14
Identities = 41/132 (31%), Positives = 66/132 (50%), Gaps = 23/132 (17%)
Query: 7 ILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHN----------------SVPEAVDRVKD 50
+L+ GG G+ G AL L + G +V ++DNL S+ E + K+
Sbjct: 3 VLILGGDGYCGWPTALHLSKRGHEVCIVDNLVRRRIDVELGLESLTPIASIHERLRAWKE 62
Query: 51 LAGPELAKKLEFHVGDLRNKDDLDKLFSSQKFEAVIHFGALKAVAES---VQHPFRYFDN 107
L G K +EF+VGD + + L +L +S + +AV+HF ++ S +H N
Sbjct: 63 LTG----KTIEFYVGDACDYEFLAELLASHEPDAVVHFAEQRSAPYSMIDREHANYTQHN 118
Query: 108 NLIGTINLYQAM 119
N+IGT+NL A+
Sbjct: 119 NVIGTLNLLFAI 130
|
Arabidopsis thaliana UDP-sulfoquinovose-synthase ( SQD1), an extended SDR, catalyzes the transfer of SO(3)(-) to UDP-glucose in the biosynthesis of plant sulfolipids. Members of this subgroup share the conserved SDR catalytic residues, and a partial match to the characteristic extended-SDR NAD-binding motif. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 382 |
| >gnl|CDD|182313 PRK10217, PRK10217, dTDP-glucose 4,6-dehydratase; Provisional | Back alignment and domain information |
|---|
Score = 71.6 bits (175), Expect = 6e-14
Identities = 88/347 (25%), Positives = 141/347 (40%), Gaps = 65/347 (18%)
Query: 5 KNILVTGGAGFIGTHCALQLLQ-GGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFH 63
+ IL+TGGAGFIG+ ++ VV++D L + + LA +++ F
Sbjct: 2 RKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYA-----GNLMSLAPVAQSERFAFE 56
Query: 64 VGDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKY- 122
D+ ++ +L ++F+ + + V+H A V S+ P + + N++GT L +A Y
Sbjct: 57 KVDICDRAELARVFTEHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYW 116
Query: 123 ----NCKKLVFS----SSATIYGQPEKIPCVEDF-----PYGAMNPYGRTKQWCEEIAFD 169
KK F S+ +YG + +DF PY +PY +K
Sbjct: 117 NALTEDKKSAFRFHHISTDEVYGD---LHSTDDFFTETTPYAPSSPYSASK--------- 164
Query: 170 VQKADPEWRIILLRYFNP-VGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQD 228
+D R L Y P + + S G P P L+P + A+ P L VYG
Sbjct: 165 -ASSDHLVRAWLRTYGLPTLITNCSNNYG--PYHFPEKLIPLMILNALAGKP-LPVYG-- 218
Query: 229 YPTKDGSAVRDYIHVMDLADG--CIA--------YNLGNG---KGISVLEMVAAFEKASG 275
+G +RD+++V D A C+A YN+G K + V+E + +
Sbjct: 219 ----NGQQIRDWLYVEDHARALYCVATTGKVGETYNIGGHNERKNLDVVETICELLEELA 274
Query: 276 KKIP---------IKFCPRRVGDATAVYAATDKAHKELGWKPKYGIE 313
P I F R G K +ELGW P+ E
Sbjct: 275 PNKPQGVAHYRDLITFVADRPGHDLRYAIDASKIARELGWLPQETFE 321
|
Length = 355 |
| >gnl|CDD|187537 cd05226, SDR_e_a, Extended (e) and atypical (a) SDRs | Back alignment and domain information |
|---|
Score = 67.8 bits (166), Expect = 1e-13
Identities = 39/174 (22%), Positives = 64/174 (36%), Gaps = 27/174 (15%)
Query: 7 ILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGD 66
IL+ G GFIG A +LL+ G +V L+ + + GD
Sbjct: 1 ILILGATGFIGRALARELLEQGHEVTLLVRNTKRLSKEDQEPVA-----------VVEGD 49
Query: 67 LRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKK 126
LR+ D L + VIH + + ++ GT N+ +A + K
Sbjct: 50 LRDLDSLSDAVQGV--DVVIHLAGAPRDTRD------FCEVDVEGTRNVLEAAKEAGVKH 101
Query: 127 LVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKADPEWRII 180
+F SS YG E+ +PY K E + +++A + I+
Sbjct: 102 FIFISSLGAYGDL-----HEETEPSPSSPYLAVKAKTEAV---LREASLPYTIV 147
|
Extended or atypical short-chain dehydrogenases/reductases (SDRs, aka tyrosine-dependent oxidoreductases) are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 176 |
| >gnl|CDD|187539 cd05228, AR_FR_like_1_SDR_e, uncharacterized subgroup of aldehyde reductase and flavonoid reductase related proteins, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 69.2 bits (170), Expect = 2e-13
Identities = 72/353 (20%), Positives = 120/353 (33%), Gaps = 83/353 (23%)
Query: 7 ILVTGGAGFIGTHCALQLLQGGFKV-VLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVG 65
ILVTG GF+G++ LL G++V L+ + L G +E G
Sbjct: 1 ILVTGATGFLGSNLVRALLAQGYRVRALV--------RSGSDAVLLDGLP----VEVVEG 48
Query: 66 DLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCK 125
DL + L + + V H A + + + N+ GT N+ A + +
Sbjct: 49 DLTDAASLAAAM--KGCDRVFHLAAF--TSLWAKDRKELYRTNVEGTRNVLDAALEAGVR 104
Query: 126 KLVFSSSATIYGQPEKIPCVEDFPYGAM---NPYGRTKQWCEEIAFDVQKADPEWRIILL 182
++V +SS G P E P+ N Y R+K E + + ++++
Sbjct: 105 RVVHTSSIAALGGPPDGRIDETTPWNERPFPNDYYRSKLLAELEVLEAAAEGLD--VVIV 162
Query: 183 RYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAVRDYIH 242
G D L + G+ P YP G ++
Sbjct: 163 NPSAVFGPG-------DEGPTSTGLD--VLDYLNGKLPA-------YP--PGGT--SFVD 202
Query: 243 VMDLADGCIA----------YNLGNGKGISVLEMVAAFEKASGKKIPIKFCPRRV----- 287
V D+A+G IA Y LG G+ +S ++ + +G K P + P +
Sbjct: 203 VRDVAEGHIAAMEKGRRGERYILG-GENLSFKQLFETLAEITGVKPPRRTIPPWLLKAVA 261
Query: 288 GDATAVYAAT----------------------DKAHKELGWKP---KYGIEDM 315
+ T DKA +ELG+ P + + D
Sbjct: 262 ALSELKARLTGKPPLLTPRTARVLRRNYLYSSDKARRELGYSPRPLEEALRDT 314
|
This subgroup contains proteins of unknown function related to aldehyde reductase and flavonoid reductase of the extended SDR-type. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. The related flavonoid reductases act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 318 |
| >gnl|CDD|216283 pfam01073, 3Beta_HSD, 3-beta hydroxysteroid dehydrogenase/isomerase family | Back alignment and domain information |
|---|
Score = 67.4 bits (165), Expect = 8e-13
Identities = 52/172 (30%), Positives = 75/172 (43%), Gaps = 31/172 (18%)
Query: 8 LVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLA-GPELAKKLE----- 61
LVTGG GF+G H LL+ G + E RV DL PEL +
Sbjct: 1 LVTGGGGFLGRHIVRLLLREG-----------ELQEV--RVFDLRFSPELLEDFSKLQVI 47
Query: 62 -FHVGDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMA 120
+ GD+ +K DL + + Q + VIH A+ V + N+ GT N+ A
Sbjct: 48 TYIEGDVTDKQDLRR--ALQGSDVVIHTAAIIDVF-GKAYRDTIMKVNVKGTQNVLDACV 104
Query: 121 KYNCKKLVFSSSATI-----YGQPEKIPCVEDFPYGA--MNPYGRTKQWCEE 165
K + LV++SS + YGQP + E PY + +PY +K E+
Sbjct: 105 KAGVRVLVYTSSMEVVGPNSYGQP-IVNGDETTPYESTHQDPYPESKALAEK 155
|
The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyzes the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones. Length = 280 |
| >gnl|CDD|217199 pfam02719, Polysacc_synt_2, Polysaccharide biosynthesis protein | Back alignment and domain information |
|---|
Score = 66.7 bits (164), Expect = 1e-12
Identities = 48/198 (24%), Positives = 86/198 (43%), Gaps = 44/198 (22%)
Query: 7 ILVTGGAGFIGTHCALQLLQGGFKVVLI--------DNLHNSVPEAVDRVKDLAGPELAK 58
+LVTGG G IG+ Q+L+ K +++ + ++L
Sbjct: 1 VLVTGGGGSIGSELCRQILKFNPKKIILFSRDEFKLYEIR----------QELRQEYNDP 50
Query: 59 KLEFHVGDLRNKDDLDKLFSSQKFEAVIHFGALKAV--AESVQHPFRYFDNNLIGTINLY 116
KL F +GD+R+++ L++ + V H ALK V E +P N++GT N+
Sbjct: 51 KLRFFIGDVRDRERLERAMEQHGVDTVFHAAALKHVPLVE--YNPMEAIKTNVLGTENVA 108
Query: 117 QAMAKYNCKKLVFSSSATIYGQPEKIPCVEDFPYGAMNP---YGRTKQWCEEI--AFDVQ 171
+A + +K V S+ +K A+NP G TK+ E++ A + +
Sbjct: 109 EAAIENGVEKFVLIST-------DK----------AVNPTNVMGATKRLAEKLFQAANRE 151
Query: 172 KADPEWRIILLRYFNPVG 189
+ R ++R+ N +G
Sbjct: 152 SGSGKTRFSVVRFGNVLG 169
|
This is a family of diverse bacterial polysaccharide biosynthesis proteins including the CapD protein, WalL protein mannosyl-transferase and several putative epimerases (e.g. WbiI). Length = 280 |
| >gnl|CDD|187543 cd05232, UDP_G4E_4_SDR_e, UDP-glucose 4 epimerase, subgroup 4, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 66.6 bits (163), Expect = 2e-12
Identities = 74/344 (21%), Positives = 110/344 (31%), Gaps = 83/344 (24%)
Query: 6 NILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVG 65
+LVTG GFIG +LL G +V + AV ++
Sbjct: 1 KVLVTGANGFIGRALVDKLLSRGEEVRI----------AVRNAENAEP----------SV 40
Query: 66 DLRNKDDLDKL-FSSQKFEAVIHFGALKAVAESVQHP--FRYFDNNLIGTINLYQAMAKY 122
L D+D +AV+H A V Y N T L +A A+
Sbjct: 41 VLAELPDIDSFTDLFLGVDAVVHLAARVHVMNDQGADPLSDYRKVNTELTRRLARAAARQ 100
Query: 123 NCKKLVFSSSATIYGQP-EKIPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKADPE--WRI 179
K+ VF SS + G+ P E P + YGR+K E A + + +
Sbjct: 101 GVKRFVFLSSVKVNGEGTVGAPFDETDPPAPQDAYGRSK-LEAERA--LLELGASDGMEV 157
Query: 180 ILLR----YFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGS 235
++LR Y G G LM + R L P
Sbjct: 158 VILRPPMVY----GPGVRGNFA--------RLMR-----LIDRGLPL-------PPGAVK 193
Query: 236 AVRDYIHVMDLADG---CI--------AYNLGNGKGISVLEMVAAFEKASGKKIPIKFCP 284
R + + +L D CI + + +G +S E+V +A GK + P
Sbjct: 194 NRRSLVSLDNLVDAIYLCISLPKAANGTFLVSDGPPVSTAELVDEIRRALGKPTRLLPVP 253
Query: 285 RRV--------GDATAVY-----AATDKAH--KELGWKPKYGIE 313
+ G + D ELGW+P +E
Sbjct: 254 AGLLRFAAKLLGKRAVIQRLFGSLQYDPEKTQNELGWRPPISLE 297
|
UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup is comprised of bacterial proteins, and includes the Staphylococcus aureus capsular polysaccharide Cap5N, which may have a role in the synthesis of UDP-N-acetyl-d-fucosamine. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 303 |
| >gnl|CDD|187575 cd05265, SDR_a1, atypical (a) SDRs, subgroup 1 | Back alignment and domain information |
|---|
Score = 64.6 bits (158), Expect = 5e-12
Identities = 68/303 (22%), Positives = 110/303 (36%), Gaps = 76/303 (25%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLID--NLHNSVPEAVDRVKDLAGPELAKKLEF 62
IL+ GG FIG +LL G V + + +PE V E
Sbjct: 1 MKILIIGGTRFIGKALVEELLAAGHDVTVFNRGRTKPDLPEGV---------------EH 45
Query: 63 HVGDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKY 122
VGD ++D L++L + F+ V+ A V+ F
Sbjct: 46 IVGDRNDRDALEELLGGEDFDVVVDTIA--YTPRQVERALDAFKG--------------- 88
Query: 123 NCKKLVFSSSATIYGQP-----EKIPCVEDFPYGAMNP--YGRTKQWCEEIAFDVQKADP 175
K+ +F SSA++Y +P E P E G +P YGR K+ E++ +
Sbjct: 89 RVKQYIFISSASVYLKPGRVITESTPLREPDAVGLSDPWDYGRGKRAAEDVLIE----AA 144
Query: 176 EWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPY-IQQVAVGRHPELNVYGQDYPTKDG 234
+ ++R G + + Y ++A GR + V G DG
Sbjct: 145 AFPYTIVRPPYIYGPGD-----------YTGRLAYFFDRLARGR--PILVPG------DG 185
Query: 235 SAVRDYIHVMDLAD---GCI--------AYNLGNGKGISVLEMVAAFEKASGKKIPIKFC 283
++ +IHV DLA G +N+ + ++ E++ A KA GK+ I
Sbjct: 186 HSLVQFIHVKDLARALLGAAGNPKAIGGIFNITGDEAVTWDELLEACAKALGKEAEIVHV 245
Query: 284 PRR 286
Sbjct: 246 EED 248
|
Atypical SDRs in this subgroup are poorly defined and have been identified putatively as isoflavones reductase, sugar dehydratase, mRNA binding protein etc. Atypical SDRs are distinct from classical SDRs. Members of this subgroup retain the canonical active site triad (though not the upstream Asn found in most SDRs) but have an unusual putative glycine-rich NAD(P)-binding motif, GGXXXXG, in the usual location. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 250 |
| >gnl|CDD|233954 TIGR02622, CDP_4_6_dhtase, CDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Score = 65.0 bits (159), Expect = 7e-12
Identities = 93/356 (26%), Positives = 146/356 (41%), Gaps = 63/356 (17%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHV 64
K +LVTG GF G+ +L LL+ G +V +L P + +L LAKK+E H
Sbjct: 5 KKVLVTGHTGFKGSWLSLWLLELGAEVYGY-SLD---PPTSPNLFELLN--LAKKIEDHF 58
Query: 65 GDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAM-AKYN 123
GD+R+ L K + K E V H A V +S P F+ N++GT+NL +A+ A +
Sbjct: 59 GDIRDAAKLRKAIAEFKPEIVFHLAAQPLVRKSYADPLETFETNVMGTVNLLEAIRAIGS 118
Query: 124 CKKLVFSSSATIYGQPEKI-PCVEDFPYGAMNPYGRTKQWCEEIAFDVQKA----DPEWR 178
K +V +S Y E + E P G +PY +K E + + +
Sbjct: 119 VKAVVNVTSDKCYRNDEWVWGYRETDPLGGHDPYSSSKACAELVIASYRSSFFGVANFHG 178
Query: 179 IIL--LRYFNPVGAHESGKLGEDPKGIPNNLMPYIQ--QVAVGRHPELNVYGQDYPTKDG 234
I + R N +G G ED + IP+ + + V + R+P+
Sbjct: 179 IKIASARAGNVIGG---GDWAED-RLIPDVIRAFSSNKIVII-RNPD------------- 220
Query: 235 SAVRDYIHVMDLADGCI---------------AYNLG--NGKGISVLEMVA-AFEKASGK 276
A R + HV++ G + A+N G V+E+V A E G
Sbjct: 221 -ATRPWQHVLEPLSGYLLLAEKLFTGQAEFAGAWNFGPRASDNARVVELVVDALEFWWGD 279
Query: 277 KIPIKFCPRRVGDATAVYAA------TDKAHKELGWKPKYGIEDMCAHQWNWAKNN 326
+ D + A + KA LGW P++G+E+ + +W K
Sbjct: 280 DAEWE----DDSDLNHPHEARLLKLDSSKARTLLGWHPRWGLEEAVSRTVDWYKAW 331
|
Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. Length = 349 |
| >gnl|CDD|178326 PLN02725, PLN02725, GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase | Back alignment and domain information |
|---|
Score = 64.3 bits (157), Expect = 1e-11
Identities = 66/282 (23%), Positives = 115/282 (40%), Gaps = 42/282 (14%)
Query: 65 GDLRNKDDLDKLFSSQKFEAVIHFGA-LKAVAESVQHPFRYFDNNLIGTINLYQAMAKYN 123
DL + D++ F+ +K VI A + + ++ +P + NL N+ A ++
Sbjct: 33 LDLTRQADVEAFFAKEKPTYVILAAAKVGGIHANMTYPADFIRENLQIQTNVIDAAYRHG 92
Query: 124 CKKLVFSSSATIYGQPEKIPCVEDFPY-------GAMNPYGRTKQW--CEEIAFDVQ--- 171
KKL+F S+ IY P+ P P G P T +W +IA
Sbjct: 93 VKKLLFLGSSCIY--PKFAP----QPIPETALLTGPPEP---TNEWYAIAKIAGIKMCQA 143
Query: 172 -KADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYP 230
+ W I N G H++ E+ IP L+ + PE+ V+G
Sbjct: 144 YRIQYGWDAISGMPTNLYGPHDNFHP-ENSHVIP-ALIRRFHEAKANGAPEVVVWGS--- 198
Query: 231 TKDGSAVRDYIHVMDLADGCI----AY------NLGNGKGISVLEMVAAFEKASGKKIPI 280
GS +R+++HV DLAD + Y N+G+G +++ E+ ++ G + +
Sbjct: 199 ---GSPLREFLHVDDLADAVVFLMRRYSGAEHVNVGSGDEVTIKELAELVKEVVGFEGEL 255
Query: 281 KFCPRRVGDATAVYAATDKAHKELGWKPKYGIEDMCAHQWNW 322
+ + D T + LGW PK+ ++D + W
Sbjct: 256 VWDTSK-PDGTPRKLMDSSKLRSLGWDPKFSLKDGLQETYKW 296
|
Length = 306 |
| >gnl|CDD|187538 cd05227, AR_SDR_e, aldehyde reductase, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 61.9 bits (151), Expect = 6e-11
Identities = 47/208 (22%), Positives = 84/208 (40%), Gaps = 47/208 (22%)
Query: 7 ILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSV--PEAVDRVKDLAGPELAK-KLEFH 63
+LVTG GFI +H QLL+ G+KV +V ++K L +LEF
Sbjct: 2 VLVTGATGFIASHIVEQLLKAGYKV------RGTVRSLSKSAKLKALLKAAGYNDRLEFV 55
Query: 64 VGDLRNKDD-LDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNN---------LIGTI 113
+ D + D+ + + VIH + PF + + + GT+
Sbjct: 56 IVDDLTAPNAWDEAL--KGVDYVIHVAS----------PFPFTGPDAEDDVIDPAVEGTL 103
Query: 114 NLYQAMAKY-NCKKLVFSSS--ATIYGQPE--KIPCVED------FPYGA-MNPYGRTKQ 161
N+ +A + K++V +SS A E E+ ++ Y +K
Sbjct: 104 NVLEAAKAAGSVKRVVLTSSVAAVGDPTAEDPGKVFTEEDWNDLTISKSNGLDAYIASKT 163
Query: 162 WCEEIAFD-VQKADPEWRIILLRYFNPV 188
E+ A++ V++ P++ +I + NP
Sbjct: 164 LAEKAAWEFVKENKPKFELITI---NPG 188
|
This subgroup contains aldehyde reductase of the extended SDR-type and related proteins. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 301 |
| >gnl|CDD|236649 PRK10084, PRK10084, dTDP-glucose 4,6 dehydratase; Provisional | Back alignment and domain information |
|---|
Score = 62.5 bits (152), Expect = 6e-11
Identities = 93/353 (26%), Positives = 147/353 (41%), Gaps = 77/353 (21%)
Query: 7 ILVTGGAGFIGTHCALQLLQGGFKVV--LIDNLHNSVPEAVDRV------KDLAGPELAK 58
ILVTGGAGFIG+ VV +I+N +SV VD++ + LA ++
Sbjct: 3 ILVTGGAGFIGS-----------AVVRHIINNTQDSVVN-VDKLTYAGNLESLADVSDSE 50
Query: 59 KLEFHVGDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQA 118
+ F D+ ++ +LD++F+ + +AV+H A V S+ P + + N++GT L +A
Sbjct: 51 RYVFEHADICDRAELDRIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEA 110
Query: 119 MAKY-----NCKKLVFS----SSATIYG---------QPEKIPC-VEDFPYGAMNPYGRT 159
Y KK F S+ +YG E++P E Y +PY +
Sbjct: 111 ARNYWSALDEDKKNAFRFHHISTDEVYGDLPHPDEVENSEELPLFTETTAYAPSSPYSAS 170
Query: 160 KQWCEEIAFDVQKADPEWRIILLRYFNP-VGAHESGKLGEDPKGIPNNLMPYIQQVAVGR 218
K +D R L Y P + + S G P P L+P + A+
Sbjct: 171 K----------ASSDHLVRAWLRTYGLPTIVTNCSNNYG--PYHFPEKLIPLVILNALEG 218
Query: 219 HPELNVYGQDYPTKDGSAVRDYIHVMDLA--------DGCIA--YNLG---NGKGISVLE 265
P L +YG+ G +RD+++V D A +G YN+G K + V+
Sbjct: 219 KP-LPIYGK------GDQIRDWLYVEDHARALYKVVTEGKAGETYNIGGHNEKKNLDVVL 271
Query: 266 MVAAF-----EKASGKKIPIKFCPRRVGDATAVYAATDKAHKELGWKPKYGIE 313
+ KA+ + I + R G K +ELGWKP+ E
Sbjct: 272 TICDLLDEIVPKATSYREQITYVADRPGHDRRYAIDASKISRELGWKPQETFE 324
|
Length = 352 |
| >gnl|CDD|215310 PLN02572, PLN02572, UDP-sulfoquinovose synthase | Back alignment and domain information |
|---|
Score = 60.2 bits (146), Expect = 4e-10
Identities = 41/133 (30%), Positives = 71/133 (53%), Gaps = 23/133 (17%)
Query: 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHN----------------SVPEAV 45
+ +K ++V GG G+ G AL L + G++V ++DNL S+ E V
Sbjct: 45 SKKKKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERV 104
Query: 46 DRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYF 105
R K+++G K++E +VGD+ + + L + F S + +AV+HFG ++ S+ R
Sbjct: 105 RRWKEVSG----KEIELYVGDICDFEFLSEAFKSFEPDAVVHFGEQRSAPYSMIDRSRAV 160
Query: 106 ---DNNLIGTINL 115
NN+IGT+N+
Sbjct: 161 FTQHNNVIGTLNV 173
|
Length = 442 |
| >gnl|CDD|163279 TIGR03466, HpnA, hopanoid-associated sugar epimerase | Back alignment and domain information |
|---|
Score = 59.2 bits (144), Expect = 5e-10
Identities = 80/355 (22%), Positives = 135/355 (38%), Gaps = 104/355 (29%)
Query: 8 LVTGGAGFIGTHCALQLLQGGFKV-VLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGD 66
LVTG GF+G+ LL+ G +V VL V DR ++L G +E GD
Sbjct: 4 LVTGATGFVGSAVVRLLLEQGEEVRVL-------VRPTSDR-RNLEG----LDVEIVEGD 51
Query: 67 LRNKDDLDKLFSSQKFEAVIHFGALKAVAES----VQHPFRYFDNNLIGTINLYQAMAKY 122
LR+ L K + A+ H VA P + N+ GT NL +A +
Sbjct: 52 LRDPASLRKAVAG--CRALFH------VAADYRLWAPDPEEMYAANVEGTRNLLRAALEA 103
Query: 123 NCKKLVFSSS-ATIYGQPEKIPCVEDFPYGAMN---PYGRTKQWCEEIAFDVQKADPEWR 178
+++V++SS AT+ + + P E P + Y R+K E+ A ++
Sbjct: 104 GVERVVYTSSVATLGVRGDGTPADETTPSSLDDMIGHYKRSKFLAEQAALEMAAEKGLPV 163
Query: 179 IILLRYFN---PVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPE-----LNVYGQDYP 230
+I+ N P+G D K P + I G+ P LN+
Sbjct: 164 VIV----NPSTPIGPR-------DIKPTPTGRI--IVDFLNGKMPAYVDTGLNL------ 204
Query: 231 TKDGSAVRDYIHVMDLADGCIA----------YNLGNGKGISVLEMVAAFEKASGKKIPI 280
+HV D+A+G + Y LG G+ +++ +++ + +G+ P
Sbjct: 205 ----------VHVDDVAEGHLLALERGRIGERYILG-GENLTLKQILDKLAEITGRPAPR 253
Query: 281 KFCPRRVGDATA---------------------------VYAATDKAHKELGWKP 308
PR + A ++ ++ KA +ELG++
Sbjct: 254 VKLPRWLLLPVAWGAEALARLTGKEPRVTVDGVRMAKKKMFFSSAKAVRELGYRQ 308
|
The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene. This gene and its association with hopene biosynthesis in Zymomonas mobilis has been noted in the literature where the gene symbol hpnA was assigned. Hopanoids are known to be components of the plasma membrane and to have polar sugar head groups in Z. mobilis and other species. Length = 328 |
| >gnl|CDD|212491 cd05233, SDR_c, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 56.1 bits (136), Expect = 3e-09
Identities = 41/164 (25%), Positives = 62/164 (37%), Gaps = 34/164 (20%)
Query: 7 ILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGD 66
LVTG + IG A +L + G KVVL D EA+ + + L D
Sbjct: 1 ALVTGASSGIGRAIARRLAREGAKVVLADR----NEEALAELAAIE--ALGGNAVAVQAD 54
Query: 67 LRNKDDLDKLFSSQKFEAVIHFGALKAV--AESVQHPF-----------RYFDNNLIGTI 113
+ +++D++ L EA+ FG L + + P R D NL G
Sbjct: 55 VSDEEDVEALVE----EALEEFGRLDILVNNAGIARPGPLEELTDEDWDRVLDVNLTGVF 110
Query: 114 NLYQAMAKYNCKK----LVF-SSSATIYGQPEKIPCVEDFPYGA 152
L +A + K+ +V SS A + P + Y A
Sbjct: 111 LLTRAALPHMKKQGGGRIVNISSVAGLRPLPGQA------AYAA 148
|
SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 234 |
| >gnl|CDD|178298 PLN02695, PLN02695, GDP-D-mannose-3',5'-epimerase | Back alignment and domain information |
|---|
Score = 56.7 bits (137), Expect = 4e-09
Identities = 81/347 (23%), Positives = 130/347 (37%), Gaps = 58/347 (16%)
Query: 2 ASEK-NILVTGGAGFIGTHCALQLLQGGFKVVLID---NLHNSVPEAVDRVKDLAGPELA 57
SEK I +TG GFI +H A +L G ++ D N H S
Sbjct: 18 PSEKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEHMSEDMFCH----------- 66
Query: 58 KKLEFHVGDLRNKDDLDKLFS--SQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINL 115
EFH+ DLR ++ K+ F G + + + H ++N +I + N+
Sbjct: 67 ---EFHLVDLRVMENCLKVTKGVDHVFNLAADMGGMGFIQSN--HSVIMYNNTMI-SFNM 120
Query: 116 YQAMAKYNCKKLVFSSSATIY---GQPEKIPCVED---FPYGAMNPYGRTKQWCEEIAFD 169
+A K+ ++SSA IY Q E +++ +P + YG K EE+
Sbjct: 121 LEAARINGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLATEELCKH 180
Query: 170 VQKADP-EWRIILLRYFNPVGAHESGKLGED--PKGIPNNLMPYIQQVAVGRHPELNVYG 226
K E RI R+ N G + K G + P A+ E ++G
Sbjct: 181 YTKDFGIECRIG--RFHNIYGPFGTWKGGREKAPAAFCRK--------ALTSTDEFEMWG 230
Query: 227 QDYPTKDGSAVRDYIHVMDLADG---------CIAYNLGNGKGISVLEMVAAFEKASGKK 277
DG R + + + +G N+G+ + +S+ EM KK
Sbjct: 231 ------DGKQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIALSFENKK 284
Query: 278 IPIKFCPRRVGDATAVYAATDKAHKELGWKPKYGIEDMCAHQWNWAK 324
+PIK P G + ++LGW P ++D + W K
Sbjct: 285 LPIKHIPGPEG-VRGRNSDNTLIKEKLGWAPTMRLKDGLRITYFWIK 330
|
Length = 370 |
| >gnl|CDD|223959 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only] | Back alignment and domain information |
|---|
Score = 55.6 bits (134), Expect = 6e-09
Identities = 33/155 (21%), Positives = 55/155 (35%), Gaps = 22/155 (14%)
Query: 1 MASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKL 60
S K LVTG + IG A L + G +VV+ S EA + + +
Sbjct: 2 DLSGKVALVTGASSGIGRAIARALAREGARVVVAA--RRSEEEAAEALAAAIKEAGGGRA 59
Query: 61 EFHVGDLRNK-DDLDKLFSSQKFEAVIHFGAL-------------KAVAESVQHPFRY-F 105
D+ + + ++ L + A FG + + E + +
Sbjct: 60 AAVAADVSDDEESVEALVA----AAEEEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVI 115
Query: 106 DNNLIGTINLYQAMAKYN-CKKLVFSSSATIYGQP 139
D NL+G L +A +++V SS G P
Sbjct: 116 DVNLLGAFLLTRAALPLMKKQRIVNISSVAGLGGP 150
|
Length = 251 |
| >gnl|CDD|187573 cd05263, MupV_like_SDR_e, Pseudomonas fluorescens MupV-like, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 55.8 bits (135), Expect = 7e-09
Identities = 39/180 (21%), Positives = 70/180 (38%), Gaps = 13/180 (7%)
Query: 7 ILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGD 66
+ VTGG GF+G H +LL+ GFKV+++ S + A ++ GD
Sbjct: 1 VFVTGGTGFLGRHLVKRLLENGFKVLVLV---RSESLGEAHERIEEAGLEADRVRVLEGD 57
Query: 67 LRNK----DDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKY 122
L + K + VIH A + +R N+ GT ++ + A+
Sbjct: 58 LTQPNLGLSAAASRELAGKVDHVIHCAASYDFQAPNEDAWR---TNIDGTEHVLELAARL 114
Query: 123 NCKKLVFSSSATIYGQPEKI--PCVEDFPYGAMNPYGRTKQWCEEIAFDVQKADPEWRII 180
+ ++ + S+A + G E + NPY ++K E++ P +
Sbjct: 115 DIQRFHYVSTAYVAGNREGNIRETELNPGQNFKNPYEQSKAEAEQLVRAAATQIP-LTVY 173
|
This subgroup of extended SDR family domains have the characteristic active site tetrad and a well-conserved NAD(P)-binding motif. This subgroup is not well characterized, its members are annotated as having a variety of putative functions. One characterized member is Pseudomonas fluorescens MupV a protein involved in the biosynthesis of Mupirocin, a polyketide-derived antibiotic. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293 |
| >gnl|CDD|218026 pfam04321, RmlD_sub_bind, RmlD substrate binding domain | Back alignment and domain information |
|---|
Score = 54.9 bits (133), Expect = 1e-08
Identities = 70/256 (27%), Positives = 99/256 (38%), Gaps = 73/256 (28%)
Query: 7 ILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGD 66
ILVTG G +G L + G +VV A+DR PEL D
Sbjct: 1 ILVTGANGQLGRELTRLLAERGVEVV-----------ALDR------PEL---------D 34
Query: 67 LRNKDDLDKLFSSQKFEAVIHFGALKAV--AESVQHPFRYFDNNLIGTINLYQAMAKYNC 124
L + + + L + + V++ A AV AES P + N +G NL +A A
Sbjct: 35 LTDPEAVAALVREARPDVVVNAAAYTAVDKAES--EPELAYAVNALGPGNLAEACAARGA 92
Query: 125 KKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKADPEWRIILLR- 183
L+ S+ ++ + P ED P G +N YGRTK E A V A+P ++LR
Sbjct: 93 -PLIHISTDYVFDGAKGGPYREDDPTGPLNVYGRTK-LAGEQA--VLAANPRH--LILRT 146
Query: 184 ---YFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNV----YGQDYPTKDGSA 236
Y G + NN + + ++A EL V G PT
Sbjct: 147 AWVY----GEY------------GNNFVKTMLRLA-AERDELRVVDDQLGS--PT----- 182
Query: 237 VRDYIHVMDLADGCIA 252
DLAD +A
Sbjct: 183 -----SARDLADALLA 193
|
L-rhamnose is a saccharide required for the virulence of some bacteria. Its precursor, dTDP-L-rhamnose, is synthesised by four different enzymes the final one of which is RmlD. The RmlD substrate binding domain is responsible for binding a sugar nucleotide. Length = 284 |
| >gnl|CDD|225857 COG3320, COG3320, Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Score = 54.7 bits (132), Expect = 2e-08
Identities = 46/188 (24%), Positives = 73/188 (38%), Gaps = 39/188 (20%)
Query: 5 KNILVTGGAGFIGTHCALQLLQG-GFKVV-LIDNLHNSVPEAVDRVKDLAGP------EL 56
+N+L+TG GF+G + L+LL KV+ L+ S A+ R++
Sbjct: 1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRA--QSDEAALARLEKTFDLYRHWDELS 58
Query: 57 AKKLEFHVGDLRNKDDLDKLFSSQKFEA-------VIHFGALKAVAESVQHPFRY---FD 106
A ++E GDL + DL S + ++ +IH AL V H F Y
Sbjct: 59 ADRVEVVAGDL-AEPDLG--LSERTWQELAENVDLIIHNAAL------VNHVFPYSELRG 109
Query: 107 NNLIGTINLYQAMAKYNCKKLVFSSSATIYGQP------EKIPCVEDFPYGA---MNPYG 157
N++GT + + A K L + SS ++ + YG
Sbjct: 110 ANVLGTAEVLRLAATGKPKPLHYVSSISVGETEYYSNFTVDFDEISPTRNVGQGLAGGYG 169
Query: 158 RTKQWCEE 165
R+K W E
Sbjct: 170 RSK-WVAE 176
|
Length = 382 |
| >gnl|CDD|233427 TIGR01472, gmd, GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Score = 54.5 bits (131), Expect = 2e-08
Identities = 88/348 (25%), Positives = 150/348 (43%), Gaps = 54/348 (15%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGGFKVV-LIDNLHNSVPEAVDRVKDLAGPELAKKLEFH 63
K L+TG G G++ A LL+ G++V LI + + ++ + + +++ H
Sbjct: 1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLH 60
Query: 64 VGDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKY- 122
GDL + +L ++ K + + A V S + P D + IGT+ L +A+
Sbjct: 61 YGDLTDSSNLRRIIDEIKPTEIYNLAAQSHVKVSFEIPEYTADVDGIGTLRLLEAVRTLG 120
Query: 123 NCKKLVF--SSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKADPEWRI- 179
K + F +S++ +YG+ ++IP E P+ +PY K + I + ++A + +
Sbjct: 121 LIKSVKFYQASTSELYGKVQEIPQNETTPFYPRSPYAAAKLYAHWITVNYREAYGLFAVN 180
Query: 180 -ILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAVR 238
IL FN HES + GE+ + + ++ +G +L + G +D +
Sbjct: 181 GIL---FN----HESPRRGEN--FVTRKITRAAAKIKLGLQEKLYL-GNLDAKRDWGHAK 230
Query: 239 DYIHVMDL---ADGCIAYNLGNGKGISVLEMV-AAFE-------------------KASG 275
DY+ M L D Y + G+ SV E V +FE K +G
Sbjct: 231 DYVEAMWLMLQQDKPDDYVIATGETHSVREFVEVSFEYIGKTLNWKDKGINEVGRCKETG 290
Query: 276 KKI----PIKFCPRRV----GDATAVYAATDKAHKELGWKPKYGIEDM 315
K P F P V GDAT KA ++LGWKP+ E +
Sbjct: 291 KVHVEIDPRYFRPTEVDLLLGDAT-------KAKEKLGWKPEVSFEKL 331
|
Alternate name: GDP-D-mannose dehydratase. This enzyme converts GDP-mannose to GDP-4-dehydro-6-deoxy-D-mannose, the first of three steps for the conversion of GDP-mannose to GDP-fucose in animals, plants, and bacteria. In bacteria, GDP-L-fucose acts as a precursor of surface antigens such as the extracellular polysaccharide colanic acid of E. coli. Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116) [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. Length = 343 |
| >gnl|CDD|222146 pfam13460, NAD_binding_10, NADH(P)-binding | Back alignment and domain information |
|---|
Score = 51.9 bits (125), Expect = 4e-08
Identities = 38/175 (21%), Positives = 64/175 (36%), Gaps = 36/175 (20%)
Query: 7 ILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGD 66
I V G G G +LL G +V + A + D
Sbjct: 1 IAVIGATGKTGRRLVKELLARGHQVTAL----------SRNPSKAP----APGVTPVQKD 46
Query: 67 LRNKDDLDKLFSSQKFEAVIH-FGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCK 125
L + DL + + +AV+ FGA ++ V+H L A A+ +
Sbjct: 47 LFDLADLAEALAG--VDAVVDAFGARPDDSDGVKH--------------LLDAAARAGVR 90
Query: 126 KLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKADPEWRII 180
++V S+A +Y ++D P PY R K EE+ ++ + +W I+
Sbjct: 91 RIVVVSAAGLYRDEPGTFRLDDAP--LFPPYARAKAAAEEL---LRASGLDWTIV 140
|
Length = 182 |
| >gnl|CDD|187564 cd05254, dTDP_HR_like_SDR_e, dTDP-6-deoxy-L-lyxo-4-hexulose reductase and related proteins, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 51.5 bits (124), Expect = 2e-07
Identities = 61/286 (21%), Positives = 98/286 (34%), Gaps = 65/286 (22%)
Query: 6 NILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVG 65
IL+TG G +G L + G++V+
Sbjct: 1 KILITGATGMLGRALVRLLKERGYEVIGTGRSR---------------------ASLFKL 39
Query: 66 DLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCK 125
DL + D +++ K + +I+ A V + P + N++ NL +A + +
Sbjct: 40 DLTDPDAVEEAIRDYKPDVIINCAAYTRVDKCESDPELAYRVNVLAPENLARAAKEVGAR 99
Query: 126 KLVFSSSATIY---GQPEKIP-CVEDFPYGAMNPYGRTKQWCEEIAFDVQKADPEWRIIL 181
+ S T Y G +K P ED P +N YG++K E V A+P + I+
Sbjct: 100 LIHIS---TDYVFDG--KKGPYKEEDAP-NPLNVYGKSKLLGEVA---VLNANPRYLILR 150
Query: 182 LRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAVRDYI 241
S GE G N + ++ A + E+NV D +
Sbjct: 151 T----------SWLYGELKNGE-NFVEWMLRLAAERK--EVNVV------HD--QIGSPT 189
Query: 242 HVMDLADGCIA----------YNLGNGKGISVLEMVAAFEKASGKK 277
+ DLAD + Y+L N IS E A G
Sbjct: 190 YAADLADAILELIERNSLTGIYHLSNSGPISKYEFAKLIADALGLP 235
|
dTDP-6-deoxy-L-lyxo-4-hexulose reductase, an extended SDR, synthesizes dTDP-L-rhamnose from alpha-D-glucose-1-phosphate, providing the precursor of L-rhamnose, an essential cell wall component of many pathogenic bacteria. This subgroup has the characteristic active site tetrad and NADP-binding motif. This subgroup also contains human MAT2B, the regulatory subunit of methionine adenosyltransferase (MAT); MAT catalyzes S-adenosylmethionine synthesis. The human gene encoding MAT2B encodes two major splicing variants which are induced in human cell liver cancer and regulate HuR, an mRNA-binding protein which stabilizes the mRNA of several cyclins, to affect cell proliferation. Both MAT2B variants include this extended SDR domain. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 280 |
| >gnl|CDD|187671 cd09811, 3b-HSD_HSDB1_like_SDR_e, human 3beta-HSD (hydroxysteroid dehydrogenase) and HSD3B1(delta 5-delta 4-isomerase)-like, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 51.7 bits (124), Expect = 2e-07
Identities = 51/167 (30%), Positives = 76/167 (45%), Gaps = 15/167 (8%)
Query: 8 LVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSV-PEAVDRVKDLAGPELAKKLEFHVGD 66
LVTGG GF+G H LL+ ++ I L + PE ++ + G +E GD
Sbjct: 3 LVTGGGGFLGQHIIRLLLERKEELKEIRVLDKAFGPELIEHFEKSQGKTYVTDIE---GD 59
Query: 67 LRNKDDLDKLFSS-QKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCK 125
++ DL LF + Q VIH A+ V + + N+ GT + +A + N K
Sbjct: 60 IK---DLSFLFRACQGVSVVIHTAAIVDV-FGPPNYEELEEVNVNGTQAVLEACVQNNVK 115
Query: 126 KLVFSSSATIYGQPEK----IPCVEDFPYGAMN--PYGRTKQWCEEI 166
+LV++SS + G K VED PY + PY +K E I
Sbjct: 116 RLVYTSSIEVAGPNFKGRPIFNGVEDTPYEDTSTPPYASSKLLAENI 162
|
This extended-SDR subgroup includes human 3 beta-HSD/HSD3B1 and C(27) 3beta-HSD/ [3beta-hydroxy-delta(5)-C(27)-steroid oxidoreductase; HSD3B7], and related proteins. These proteins have the characteristic active site tetrad and NAD(P)-binding motif of extended SDRs. 3 beta-HSD catalyzes the oxidative conversion of delta 5-3 beta-hydroxysteroids to the delta 4-3-keto configuration; this activity is essential for the biosynthesis of all classes of hormonal steroids. C(27) 3beta-HSD is a membrane-bound enzyme of the endoplasmic reticulum, it catalyzes the isomerization and oxidation of 7alpha-hydroxylated sterol intermediates, an early step in bile acid biosynthesis. Mutations in the human gene encoding C(27) 3beta-HSD underlie a rare autosomal recessive form of neonatal cholestasis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 354 |
| >gnl|CDD|182998 PRK11150, rfaD, ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional | Back alignment and domain information |
|---|
Score = 50.5 bits (121), Expect = 4e-07
Identities = 71/286 (24%), Positives = 116/286 (40%), Gaps = 45/286 (15%)
Query: 7 ILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGD 66
I+VTGGAGFIG++ L G +L+ VD +KD G + ++ + D
Sbjct: 2 IIVTGGAGFIGSNIVKALNDKGITDILV----------VDNLKD--GTKFVNLVDLDIAD 49
Query: 67 LRNKDD-LDKLFSSQKF---EAVIHFGALKAVAESVQHPFRY-FDNNLIGTINLYQAMAK 121
+K+D L ++ + F EA+ H GA + E +Y DNN + L +
Sbjct: 50 YMDKEDFLAQIMAGDDFGDIEAIFHEGACSSTTE---WDGKYMMDNNYQYSKELLHYCLE 106
Query: 122 YNCKKLVFSSSATIYGQPEKIPCVEDFPY-GAMNPYGRTKQWCEEIAFDVQKADPEWRII 180
L SS+AT G+ + +E+ Y +N YG +K +E + + +I
Sbjct: 107 REIPFLYASSAATYGGRTDDF--IEEREYEKPLNVYGYSKFLFDEYVRQIL-PEANSQIC 163
Query: 181 LLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAVRDY 240
RYFN G E K N Q+ G +P+L +++ RD+
Sbjct: 164 GFRYFNVYGPREGHKGSMASVAFHLN-----NQLNNGENPKLFEGSENF-------KRDF 211
Query: 241 IHVMDLADGCI---------AYNLGNGKGISVLEMVAAFEKASGKK 277
++V D+A + +N G G+ S + A K
Sbjct: 212 VYVGDVAAVNLWFWENGVSGIFNCGTGRAESFQAVADAVLAYHKKG 257
|
Length = 308 |
| >gnl|CDD|224016 COG1091, RfbD, dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Score = 50.0 bits (120), Expect = 5e-07
Identities = 47/175 (26%), Positives = 73/175 (41%), Gaps = 31/175 (17%)
Query: 6 NILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVG 65
IL+TG G +GT + L G F+V+ A DR EL
Sbjct: 2 KILITGANGQLGTELR-RALPGEFEVI-----------ATDR------AEL--------- 34
Query: 66 DLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCK 125
D+ + D + ++ + + VI+ A AV ++ P F N G NL +A A+
Sbjct: 35 DITDPDAVLEVIRETRPDVVINAAAYTAVDKAESEPELAFAVNATGAENLARAAAEVGA- 93
Query: 126 KLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKADPEWRII 180
+LV S+ ++ + P E +N YGR+K EE V+ A P I+
Sbjct: 94 RLVHISTDYVFDGEKGGPYKETDTPNPLNVYGRSKLAGEE---AVRAAGPRHLIL 145
|
Length = 281 |
| >gnl|CDD|187554 cd05243, SDR_a5, atypical (a) SDRs, subgroup 5 | Back alignment and domain information |
|---|
Score = 48.8 bits (117), Expect = 8e-07
Identities = 35/127 (27%), Positives = 48/127 (37%), Gaps = 18/127 (14%)
Query: 6 NILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVG 65
+LV G G +G H +LL G++V A+ R A A E VG
Sbjct: 1 KVLVVGATGKVGRHVVRELLDRGYQVR-----------ALVRDPSQAEKLEAAGAEVVVG 49
Query: 66 DLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCK 125
DL + + L + +AVI A + R + G INL A K K
Sbjct: 50 DLTDAESLAAAL--EGIDAVIS-----AAGSGGKGGPRTEAVDYDGNINLIDAAKKAGVK 102
Query: 126 KLVFSSS 132
+ V SS
Sbjct: 103 RFVLVSS 109
|
This subgroup contains atypical SDRs, some of which are identified as putative NAD(P)-dependent epimerases, one as a putative NAD-dependent epimerase/dehydratase. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif that is very similar to the extended SDRs, GXXGXXG, and binds NADP. Generally, this subgroup has poor conservation of the active site tetrad; however, individual sequences do contain matches to the YXXXK active site motif, the upstream Ser, and there is a highly conserved Asp in place of the usual active site Asn throughout the subgroup. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 203 |
| >gnl|CDD|200085 TIGR01214, rmlD, dTDP-4-dehydrorhamnose reductase | Back alignment and domain information |
|---|
Score = 48.9 bits (117), Expect = 1e-06
Identities = 49/177 (27%), Positives = 74/177 (41%), Gaps = 36/177 (20%)
Query: 7 ILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVK-DLAGPELAKKLEFHVG 65
IL+TG G +G QL G VV A+ R + DL PE
Sbjct: 2 ILITGANGQLGRELVQQLSPEGRVVV-----------ALTRSQLDLTDPE---------- 40
Query: 66 DLRNKDDLDKLFSSQKFEAVIHFGALKAV--AESVQHPFRYFDNNLIGTINLYQAMAKYN 123
L++L + + +AV++ A V AES P + F N + NL +A A++
Sbjct: 41 ------ALERLLRAIRPDAVVNTAAYTDVDGAES--DPEKAFAVNALAPQNLARAAARHG 92
Query: 124 CKKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKADPEWRII 180
+ + S+ G+ K P ED +N YG++K E A V+ A P I+
Sbjct: 93 ARLVHISTDYVFDGE-GKRPYREDDATNPLNVYGQSKL-AGEQA--VRAAGPNALIV 145
|
This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. Length = 287 |
| >gnl|CDD|187584 cd05323, ADH_SDR_c_like, insect type alcohol dehydrogenase (ADH)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 48.1 bits (115), Expect = 2e-06
Identities = 34/153 (22%), Positives = 52/153 (33%), Gaps = 33/153 (21%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHV 64
K ++TGGA IG A LL+ G KV ++D E +L K F
Sbjct: 1 KVAIITGGASGIGLATAKLLLKKGAKVAILD-----RNENPGAAAELQAINPKVKATFVQ 55
Query: 65 GDLRNKDDLDKLFSSQKFEAVIHFGALKAV---------------AESVQHPFRYFDNNL 109
D+ + + L F +A+ FG + + + + D NL
Sbjct: 56 CDVTSWEQLAAAF----KKAIEKFGRVDILINNAGILDEKSYLFAGKLPPPWEKTIDVNL 111
Query: 110 IGTINLYQAMAKYNCKK--------LVFSSSAT 134
G IN +A + K +V S
Sbjct: 112 TGVINTTY-LALHYMDKNKGGKGGVIVNIGSVA 143
|
This subgroup contains insect type ADH, and 15-hydroxyprostaglandin dehydrogenase (15-PGDH) type I; these proteins are classical SDRs. ADH catalyzes the NAD+-dependent oxidation of alcohols to aldehydes/ketones. This subgroup is distinct from the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase/reductase family, and evolved in fruit flies to allow the digestion of fermenting fruit. 15-PGDH catalyzes the NAD-dependent interconversion of (5Z,13E)-(15S)-11alpha,15-dihydroxy-9-oxoprost-13-enoate and (5Z,13E)-11alpha-hydroxy-9,15-dioxoprost-13-enoate, and has a typical SDR glycine-rich NAD-binding motif, which is not fully present in ADH. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244 |
| >gnl|CDD|132628 TIGR03589, PseB, UDP-N-acetylglucosamine 4,6-dehydratase | Back alignment and domain information |
|---|
Score = 48.5 bits (116), Expect = 2e-06
Identities = 36/130 (27%), Positives = 59/130 (45%), Gaps = 11/130 (8%)
Query: 1 MASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVK--DLAGPELAK 58
M + K+IL+TGG G G +LL+ N + + D +K ++ A
Sbjct: 1 MFNNKSILITGGTGSFGKAFISRLLEN-------YNPKKIIIYSRDELKQWEMQQKFPAP 53
Query: 59 KLEFHVGDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQA 118
L F +GD+R+K+ L + + V+H ALK V + +PF N+ G N+ A
Sbjct: 54 CLRFFIGDVRDKERLTRALRGVDY--VVHAAALKQVPAAEYNPFECIRTNINGAQNVIDA 111
Query: 119 MAKYNCKKLV 128
K++V
Sbjct: 112 AIDNGVKRVV 121
|
This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family. Length = 324 |
| >gnl|CDD|187610 cd05352, MDH-like_SDR_c, mannitol dehydrogenase (MDH)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 47.7 bits (114), Expect = 2e-06
Identities = 43/156 (27%), Positives = 68/156 (43%), Gaps = 25/156 (16%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHV 64
K +VTGG+ IG A L + G V +I NS P A ++ ++LA + K + +
Sbjct: 9 KVAIVTGGSRGIGLAIARALAEAGADVAIIY---NSAPRAEEKAEELAK-KYGVKTKAYK 64
Query: 65 GDLRNKDDLDKLFSSQ-----KFEAVI-------HFGALKAVAESVQHPFRYFDNNLIGT 112
D+ +++ ++K F K + +I H AL E D NL G
Sbjct: 65 CDVSSQESVEKTFKQIQKDFGKIDILIANAGITVHKPALDYTYEQWNK---VIDVNLNGV 121
Query: 113 INLYQAMAKYNCKK----LVFSSS--ATIYGQPEKI 142
N QA AK K+ L+ ++S TI +P+
Sbjct: 122 FNCAQAAAKIFKKQGKGSLIITASMSGTIVNRPQPQ 157
|
NADP-mannitol dehydrogenase catalyzes the conversion of fructose to mannitol, an acyclic 6-carbon sugar. MDH is a tetrameric member of the SDR family. This subgroup also includes various other tetrameric SDRs, including Pichia stipitis D-arabinitol dehydrogenase (aka polyol dehydrogenase), Candida albicans Sou1p, a sorbose reductase, and Candida parapsilosis (S)-specific carbonyl reductase (SCR, aka S-specific alcohol dehydrogenase) which catalyzes the enantioselective reduction of 2-hydroxyacetophenone into (S)-1-phenyl-1,2-ethanediol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 252 |
| >gnl|CDD|187546 cd05235, SDR_e1, extended (e) SDRs, subgroup 1 | Back alignment and domain information |
|---|
Score = 47.3 bits (113), Expect = 5e-06
Identities = 41/186 (22%), Positives = 72/186 (38%), Gaps = 33/186 (17%)
Query: 6 NILVTGGAGFIGTHCALQLLQ--GGFKVV-LIDNLHNSVPEAVDRVKD--------LAGP 54
+L+TG GF+G + +LL+ K+ L+ A++R+ D L
Sbjct: 1 TVLLTGATGFLGAYLLRELLKRKNVSKIYCLVRA--KDEEAALERLIDNLKEYGLNLWDE 58
Query: 55 ELAKKLEFHVGDLRNK----DDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRY---FDN 107
+++ VGDL D D +++ + +IH GA V + Y
Sbjct: 59 LELSRIKVVVGDLSKPNLGLSDDDYQELAEEVDVIIHNGAN------VNWVYPYEELKPA 112
Query: 108 NLIGTINLYQAMAKYNCKKLVF-SSSATIYGQPEKIPCVED------FPYGAMNPYGRTK 160
N++GT L + A K L F S+ + + E+ G N Y ++K
Sbjct: 113 NVLGTKELLKLAATGKLKPLHFVSTLSVFSAEEYNALDDEESDDMLESQNGLPNGYIQSK 172
Query: 161 QWCEEI 166
E++
Sbjct: 173 WVAEKL 178
|
This family consists of an SDR module of multidomain proteins identified as putative polyketide sythases fatty acid synthases (FAS), and nonribosomal peptide synthases, among others. However, unlike the usual ketoreductase modules of FAS and polyketide synthase, these domains are related to the extended SDRs, and have canonical NAD(P)-binding motifs and an active site tetrad. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 290 |
| >gnl|CDD|187579 cd05271, NDUFA9_like_SDR_a, NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, subunit 9, 39 kDa, (NDUFA9) -like, atypical (a) SDRs | Back alignment and domain information |
|---|
Score = 46.5 bits (111), Expect = 6e-06
Identities = 20/108 (18%), Positives = 38/108 (35%), Gaps = 24/108 (22%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHV 64
+ V G GFIG + +L + G +V++ + A + ++ F
Sbjct: 1 MVVTVFGATGFIGRYVVNRLAKRGSQVIV---PYRCEAYARRLLVMGDLG----QVLFVE 53
Query: 65 GDLRNKDDLDKLFS----------------SQKFEAVIHFGALKAVAE 96
DLR+ + + K + FE V H + +A+
Sbjct: 54 FDLRDDESIRKALEGSDVVINLVGRLYETKNFSFEDV-HVEGPERLAK 100
|
This subgroup of extended SDR-like proteins are atypical SDRs. They have a glycine-rich NAD(P)-binding motif similar to the typical SDRs, GXXGXXG, and have the YXXXK active site motif (though not the other residues of the SDR tetrad). Members identified include NDUFA9 (mitochondrial) and putative nucleoside-diphosphate-sugar epimerase. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 273 |
| >gnl|CDD|187624 cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol dehydrogenase-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 46.6 bits (111), Expect = 7e-06
Identities = 42/178 (23%), Positives = 69/178 (38%), Gaps = 45/178 (25%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLID-NLHNSVPEAVDRVKDLAGPELAKKLEFH 63
K ++TG A IG A +L GF +VL D NL + + + + +A
Sbjct: 3 KVAIITGAAQGIGRAIAERLAADGFNIVLADLNLEEAAKSTIQEISEAGYNAVAVGA--- 59
Query: 64 VGDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQH-------PF---------RYFDN 107
D+ +KDD++ L AV FG+ + V + P + +
Sbjct: 60 --DVTDKDDVEALIDQ----AVEKFGSFDVM---VNNAGIAPITPLLTITEEDLKKVYAV 110
Query: 108 NLIGTINLYQAMAKYNCK-----KLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTK 160
N+ G + QA A+ K K++ +SS I V+ FP + Y +K
Sbjct: 111 NVFGVLFGIQAAARQFKKLGHGGKIINASS---------IAGVQGFPN--LGAYSASK 157
|
2,3-butanediol dehydrogenases (BDHs) catalyze the NAD+ dependent conversion of 2,3-butanediol to acetonin; BDHs are classified into types according to their stereospecificity as to substrates and products. Included in this subgroup are Klebsiella pneumonia meso-BDH which catalyzes meso-2,3-butanediol to D(-)-acetonin, and Corynebacterium glutamicum L-BDH which catalyzes lX+)-2,3-butanediol to L(+)-acetonin. This subgroup is comprised of classical SDRs with the characteristic catalytic triad and NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257 |
| >gnl|CDD|187536 cd05193, AR_like_SDR_e, aldehyde reductase, flavonoid reductase, and related proteins, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 46.5 bits (110), Expect = 8e-06
Identities = 37/145 (25%), Positives = 55/145 (37%), Gaps = 28/145 (19%)
Query: 7 ILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGD 66
+LVTG +GF+ +H QLL+ G+K V+ K H+ D
Sbjct: 1 VLVTGASGFVASHVVEQLLERGYK-----------------VRATVRDPSKVKKVNHLLD 43
Query: 67 LRNKDDLDKLF-----SSQKFEAVIHFGALKAVAESVQHPFRYFDNNLI-----GTINLY 116
L K +L Q F+ VI A + N +I GT+N
Sbjct: 44 LDAKPGRLELAVADLTDEQSFDEVIKGCAGVFHVATPVSFSSKDPNEVIKPAIGGTLNAL 103
Query: 117 QAMAKY-NCKKLVFSSSATIYGQPE 140
+A A + K+ V +SSA P+
Sbjct: 104 KAAAAAKSVKRFVLTSSAGSVLIPK 128
|
This subgroup contains aldehyde reductase and flavonoid reductase of the extended SDR-type and related proteins. Proteins in this subgroup have a complete SDR-type active site tetrad and a close match to the canonical extended SDR NADP-binding motif. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. The related flavonoid reductases act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 295 |
| >gnl|CDD|235546 PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Score = 45.9 bits (110), Expect = 1e-05
Identities = 27/90 (30%), Positives = 38/90 (42%), Gaps = 9/90 (10%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHV 64
K LVTG + IG AL+L G KVV+ D S EA + + + V
Sbjct: 6 KTALVTGASRGIGRAIALRLAADGAKVVIYD----SNEEAAEALAA-ELRAAGGEARVLV 60
Query: 65 GDLRNKDDLDKLFSSQKFEAVIHFGALKAV 94
D+ ++ + L AV FGAL +
Sbjct: 61 FDVSDEAAVRALIE----AAVEAFGALDIL 86
|
Length = 246 |
| >gnl|CDD|187572 cd05262, SDR_a7, atypical (a) SDRs, subgroup 7 | Back alignment and domain information |
|---|
Score = 45.8 bits (109), Expect = 1e-05
Identities = 78/331 (23%), Positives = 107/331 (32%), Gaps = 78/331 (23%)
Query: 7 ILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGD 66
+ VTG GFIG+ +L+ G +VV + R A A + H GD
Sbjct: 3 VFVTGATGFIGSAVVRELVAAGHEVV-----------GLARSDAGAAKLEAAGAQVHRGD 51
Query: 67 LRNKDDLDKLFS-SQKFEAVIHFGALKAVAESVQHPFRYF------DNNLIGTINLYQAM 119
L DLD L + + +AVIH H F F D I L +A+
Sbjct: 52 LE---DLDILRKAAAEADAVIHLAF--------THDFDNFAQACEVDRRAIEA--LGEAL 98
Query: 120 AKYNCKKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKADPEWRI 179
K L+++S + G E+ P P R E A ++ + +
Sbjct: 99 RGTG-KPLIYTSGIWLLGPTGGQEEDEEAPDDPPTPAARAV--SEAAALELAERGVRASV 155
Query: 180 ILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAVRD 239
+ L P H G G P I A+ R E V Y DG
Sbjct: 156 VRL----PPVVHGRGDHGFVPMLI-----------AIAR--EKGVSA--YVG-DGKNRWP 195
Query: 240 YIHVMDLADGCIAYNL--GNGK-----------GISV---LEMVAAFEKASGKKIPIKFC 283
+H D A Y L GK GI V E + IP +
Sbjct: 196 AVHRDDAAR---LYRLALEKGKAGSVYHAVAEEGIPVKDIAEAIGRRLGVPVVSIPAEEA 252
Query: 284 PRRVGDATAVYAA-----TDKAHKELGWKPK 309
G A + K + LGWKP+
Sbjct: 253 AAHFGWLAMFVALDQPVSSQKTRRRLGWKPQ 283
|
This subgroup contains atypical SDRs of unknown function. Members of this subgroup have a glycine-rich NAD(P)-binding motif consensus that matches the extended SDRs, TGXXGXXG, but lacks the characteristic active site residues of the SDRs. This subgroup has basic residues (HXXXR) in place of the active site motif YXXXK, these may have a catalytic role. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 291 |
| >gnl|CDD|219687 pfam07993, NAD_binding_4, Male sterility protein | Back alignment and domain information |
|---|
Score = 45.7 bits (109), Expect = 1e-05
Identities = 37/203 (18%), Positives = 78/203 (38%), Gaps = 41/203 (20%)
Query: 9 VTGGAGFIGTHCALQLL--QGGFKV-VLIDNLHNSVPEAVDRVKD------LAGPELA-K 58
+TG GF+G +LL K+ L+ A++R++ L A +
Sbjct: 1 LTGATGFLGKVLLEKLLRSTPEVKIYCLVRA--KDGESALERLRQELLKYGLFDRLKALE 58
Query: 59 KLEFHVGDLRNKDDL-----DKLFSSQKFEAVIHFGALKAVAESVQHPFRY---FDNNLI 110
++ GDL ++ +L D +++ + +IH A +V Y N++
Sbjct: 59 RIIPVAGDL-SEPNLGLSDEDFQELAEEVDVIIHNAA------TVNFVEPYSDLRATNVL 111
Query: 111 GTINLYQAMAKYNCKKLVFSSSATIYGQPEKIPCVEDFPYGAM---------NPYGRTKQ 161
GT + + + S+A + G+ + + + N Y ++K
Sbjct: 112 GTREVLRLAKQMKKLPFHHVSTAYVNGERGGLLEEKPYKLDEDEPALLGGLPNGYTQSK- 170
Query: 162 WC-EEIAFDVQKADPEWRIILLR 183
W E++ V++A +++ R
Sbjct: 171 WLAEQL---VREAAGGLPVVIYR 190
|
This family represents the C-terminal region of the male sterility protein in a number of arabidopsis and drosophila. A sequence-related jojoba acyl CoA reductase is also included. Length = 245 |
| >gnl|CDD|187661 cd08958, FR_SDR_e, flavonoid reductase (FR), extended (e) SDRs | Back alignment and domain information |
|---|
Score = 45.6 bits (109), Expect = 1e-05
Identities = 35/133 (26%), Positives = 58/133 (43%), Gaps = 19/133 (14%)
Query: 9 VTGGAGFIGTHCALQLLQGGFKVVL-IDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDL 67
VTG +GFIG+ +LLQ G+ V + + + + V + +L ++L+ DL
Sbjct: 3 VTGASGFIGSWLVKRLLQRGYTVRATVRDPGD--EKKVAHLLEL--EGAKERLKLFKADL 58
Query: 68 RNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLI-----GTINLYQAMAKY 122
+ D + V H VA V + +I GT+N+ +A AK
Sbjct: 59 LDYGSFDAAIDG--CDGVFH------VASPVDFDSEDPEEEMIEPAVKGTLNVLEACAKA 110
Query: 123 NC-KKLVFSSSAT 134
K++VF+SS
Sbjct: 111 KSVKRVVFTSSVA 123
|
This subgroup contains FRs of the extended SDR-type and related proteins. These FRs act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites; they have the characteristic active site triad of the SDRs (though not the upstream active site Asn) and a NADP-binding motif that is very similar to the typical extended SDR motif. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293 |
| >gnl|CDD|224015 COG1090, COG1090, Predicted nucleoside-diphosphate sugar epimerase [General function prediction only] | Back alignment and domain information |
|---|
Score = 45.7 bits (109), Expect = 1e-05
Identities = 43/185 (23%), Positives = 69/185 (37%), Gaps = 34/185 (18%)
Query: 7 ILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGD 66
IL+TGG G IG +L +GG +V ++ + H
Sbjct: 1 ILITGGTGLIGRALTARLRKGGHQVTIL-------------TRRPPKAS----QNLHPN- 42
Query: 67 LRNKDDLDKLFSSQKFEAVIHFGALKAVAE---SVQHPFRYFDNNLIGTINLYQAMAKYN 123
+ + L + +AVI+ A + +AE + + + + T L + +A
Sbjct: 43 VTLWEGLADA-LTLGIDAVINL-AGEPIAERRWTEKQKEEIRQSRINTTEKLVELIAASE 100
Query: 124 CK-KLVFSSSAT-IYGQPEKIPCVEDFPYGAMNPYGRTKQWC---EEIAFDVQKADPEWR 178
K K++ S+SA YG E+ P G Q C EE A Q R
Sbjct: 101 TKPKVLISASAVGYYGHSGDRVVTEESPPGD----DFLAQLCQDWEEEALQAQ--QLGTR 154
Query: 179 IILLR 183
++LLR
Sbjct: 155 VVLLR 159
|
Length = 297 |
| >gnl|CDD|233557 TIGR01746, Thioester-redct, thioester reductase domain | Back alignment and domain information |
|---|
Score = 45.9 bits (109), Expect = 2e-05
Identities = 40/180 (22%), Positives = 77/180 (42%), Gaps = 27/180 (15%)
Query: 6 NILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPE-AVDRVKD------LAGPELA- 57
+L+TG GF+G + +LL+ + +I + + E A++R+++ L +LA
Sbjct: 1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWHEDLAR 60
Query: 58 KKLEFHVGDLRNK----DDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRY---FDNNLI 110
+++E GDL D + ++ + ++H GAL V + Y N++
Sbjct: 61 ERIEVVAGDLSEPRLGLSDAEWERLAENVDTIVHNGAL------VNWVYPYSELRGANVL 114
Query: 111 GTINLYQAMAKYNCKKLVFSSSATIYGQPEKIPCVEDFPY-----GAMNPYGRTKQWCEE 165
GT + + A K L + S+ ++ + ED G Y ++K W E
Sbjct: 115 GTREVLRLAASGRAKPLHYVSTISVGAAIDLSTVTEDDATVTPPPGLAGGYAQSK-WVAE 173
|
This model includes the terminal domain from the fungal alpha aminoadipate reductase enzyme (also known as aminoadipate semialdehyde dehydrogenase) which is involved in the biosynthesis of lysine , as well as the reductase-containing component of the myxochelin biosynthetic gene cluster, MxcG. The mechanism of reduction involves activation of the substrate by adenylation and transfer to a covalently-linked pantetheine cofactor as a thioester. This thioester is then reduced to give an aldehyde (thus releasing the product) and a regenerated pantetheine thiol. (In myxochelin biosynthesis this aldehyde is further reduced to an alcohol or converted to an amine by an aminotransferase.) This is a fundamentally different reaction than beta-ketoreductase domains of polyketide synthases which act at a carbonyl two carbons removed from the thioester and forms an alcohol as a product. This domain is invariably found at the C-terminus of the proteins which contain it (presumably because it results in the release of the product). The majority of hits to this model are non-ribosomal peptide synthetases in which this domain is similarly located proximal to a thiolation domain (pfam00550). In some cases this domain is found at the end of a polyketide synthetase enzyme, but is unlike ketoreductase domains which are found before the thiolase domains. Exceptions to this observed relationship with the thiolase domain include three proteins which consist of stand-alone reductase domains (GP|466833 from M. leprae, GP|435954 from Anabaena and OMNI|NTL02SC1199 from Strep. coelicolor) and one protein (OMNI|NTL01NS2636 from Nostoc) which contains N-terminal homology with a small group of hypothetical proteins but no evidence of a thiolation domain next to the putative reductase domain. Below the noise cutoff to this model are proteins containing more distantly related ketoreductase and dehydratase/epimerase domains. It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold. Length = 367 |
| >gnl|CDD|226674 COG4221, COG4221, Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only] | Back alignment and domain information |
|---|
Score = 44.9 bits (107), Expect = 2e-05
Identities = 35/180 (19%), Positives = 62/180 (34%), Gaps = 31/180 (17%)
Query: 1 MASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKL 60
K L+TG + IG A L + G KVVL +R++ LA A
Sbjct: 3 TLKGKVALITGASSGIGEATARALAEAGAKVVLAA-------RREERLEALADEIGAGAA 55
Query: 61 EFHVGDLRNKDDLDKLFSS-----QKFEAVIHFGAL----KAVAESVQHPFRYFDNNLIG 111
D+ ++ ++ + + + +++ L + R D N+ G
Sbjct: 56 LALALDVTDRAAVEAAIEALPEEFGRIDILVNNAGLALGDPLDEADLDDWDRMIDTNVKG 115
Query: 112 TINLYQA----MAKYNCKKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQWCEEIA 167
+N +A M + ++ S I G+ +PY YG TK +
Sbjct: 116 LLNGTRAVLPGMVERKSGHIINLGS--IAGR---------YPYPGGAVYGATKAAVRAFS 164
|
Length = 246 |
| >gnl|CDD|187656 cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup 2, complex (x) SDRs | Back alignment and domain information |
|---|
Score = 45.4 bits (108), Expect = 2e-05
Identities = 34/150 (22%), Positives = 58/150 (38%), Gaps = 29/150 (19%)
Query: 8 LVTGGAGFIGTHCALQLL-QGGFKVVLI-----DNLHNSVPEAVDRVKDLAGPELAKKLE 61
LVTGGAG IG A L + G ++VL+ + + ++ L +
Sbjct: 209 LVTGGAGGIGRALARALARRYGARLVLLGRSPLPPEEEWKAQTLAALEALGAR-----VL 263
Query: 62 FHVGDLRNKDDLDKLFSSQKFEAVIHFGALKAV---AESVQHPF------RYFDNNL--- 109
+ D+ + + +L + +GA+ V A ++ F+ L
Sbjct: 264 YISADVTDAAAVRRLLE----KVRERYGAIDGVIHAAGVLRDALLAQKTAEDFEAVLAPK 319
Query: 110 -IGTINLYQAMAKYNCKKLV-FSSSATIYG 137
G +NL QA+A V FSS + +G
Sbjct: 320 VDGLLNLAQALADEPLDFFVLFSSVSAFFG 349
|
Ketoreductase, a module of the multidomain polyketide synthase (PKS), has 2 subdomains, each corresponding to a SDR family monomer. The C-terminal subdomain catalyzes the NADPH-dependent reduction of the beta-carbonyl of a polyketide to a hydroxyl group, a step in the biosynthesis of polyketides, such as erythromycin. The N-terminal subdomain, an interdomain linker, is a truncated Rossmann fold which acts to stabilizes the catalytic subdomain. Unlike typical SDRs, the isolated domain does not oligomerize but is composed of 2 subdomains, each resembling an SDR monomer. The active site resembles that of typical SDRs, except that the usual positions of the catalytic Asn and Tyr are swapped, so that the canonical YXXXK motif changes to YXXXN. Modular PKSs are multifunctional structures in which the makeup recapitulates that found in (and may have evolved from) FAS. Polyketide synthesis also proceeds via the addition of 2-carbon units as in fatty acid synthesis. The complex SDR NADP-binding motif, GGXGXXG, is often present, but is not strictly conserved in each instance of the module. This subfamily includes both KR domains of the Bacillus subtilis Pks J,-L, and PksM, and all three KR domains of PksN, components of the megacomplex bacillaene synthase, which synthesizes the antibiotic bacillaene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 436 |
| >gnl|CDD|187580 cd05272, TDH_SDR_e, L-threonine dehydrogenase, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 45.0 bits (107), Expect = 3e-05
Identities = 36/127 (28%), Positives = 59/127 (46%), Gaps = 16/127 (12%)
Query: 7 ILVTGGAGFIGTHCALQLL-QGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVG 65
IL+TGG G IG+ A L + G V+ A D K A L+ E+
Sbjct: 2 ILITGGLGQIGSELAKLLRKRYGKDNVI----------ASDIRKPPAHVVLSGPFEY--L 49
Query: 66 DLRNKDDLDKLFSSQKFEAVIHFGA-LKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNC 124
D+ + L+++ + K +IH A L AV E ++P +D N+ G N+ + ++N
Sbjct: 50 DVLDFKSLEEIVVNHKITWIIHLAALLSAVGE--KNPPLAWDVNMNGLHNVLELAREHNL 107
Query: 125 KKLVFSS 131
+ V S+
Sbjct: 108 RIFVPST 114
|
This subgroup contains members identified as L-threonine dehydrogenase (TDH). TDH catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. This group is distinct from TDHs that are members of the medium chain dehydrogenase/reductase family. This group has the NAD-binding motif and active site tetrad of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 308 |
| >gnl|CDD|236399 PRK09186, PRK09186, flagellin modification protein A; Provisional | Back alignment and domain information |
|---|
Score = 44.6 bits (106), Expect = 3e-05
Identities = 20/80 (25%), Positives = 35/80 (43%), Gaps = 3/80 (3%)
Query: 1 MASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKL 60
M K IL+TG G IG+ +L+ G V+ D + ++ L +KKL
Sbjct: 1 MLKGKTILITGAGGLIGSALVKAILEAGGIVIAAD---IDKEALNELLESLGKEFKSKKL 57
Query: 61 EFHVGDLRNKDDLDKLFSSQ 80
D+ +++ L++ S
Sbjct: 58 SLVELDITDQESLEEFLSKS 77
|
Length = 256 |
| >gnl|CDD|183375 PRK11908, PRK11908, NAD-dependent epimerase/dehydratase family protein; Provisional | Back alignment and domain information |
|---|
Score = 44.7 bits (106), Expect = 3e-05
Identities = 89/359 (24%), Positives = 146/359 (40%), Gaps = 83/359 (23%)
Query: 5 KNILVTGGAGFIGTHCALQLLQG-GFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFH 63
K +L+ G GFIG H + ++L+ ++V +D DR+ DL ++ F
Sbjct: 2 KKVLILGVNGFIGHHLSKRILETTDWEVYGMD-------MQTDRLGDLVNHP---RMHFF 51
Query: 64 VGDLR-NKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKY 122
GD+ NK+ ++ + +K + ++ A+ A V+ P R F+ + + + ++ KY
Sbjct: 52 EGDITINKEWIE--YHVKKCDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKY 109
Query: 123 NCKKLVFSSSATIYG-------QPEKIPCVEDFPYGAMNP----YGRTKQWCEEI--AFD 169
K LVF S++ +YG PE P V YG +N Y +KQ + + A+
Sbjct: 110 G-KHLVFPSTSEVYGMCPDEEFDPEASPLV----YGPINKPRWIYACSKQLMDRVIWAYG 164
Query: 170 VQKADPEWRIILLRYFNPVGAHESGKLGED----PKGIPNNLMPYIQQVAVGRHPELNVY 225
+++ L R FN +G G D PK + ++ V P V
Sbjct: 165 MEEG---LNFTLFRPFNWIGP------GLDSIYTPKEGSSRVVTQFLGHIVRGEPISLVD 215
Query: 226 GQDYPTKDGSAVRDYIHVMD--------------LADGCIAYNLGNGKGI-SV------- 263
G GS R + + D +A G I YN+GN K SV
Sbjct: 216 G-------GSQKRAFTDIDDGIDALMKIIENKDGVASGKI-YNIGNPKNNHSVRELANKM 267
Query: 264 LEMVAAFE--KASGKKIPI------KFCPRRVGDATAVYAATDKAHKELGWKPKYGIED 314
LE+ A + S KK+ + + + D D +ELGW PK ++D
Sbjct: 268 LELAAEYPEYAESAKKVKLVETTSGAYYGKGYQDVQNRVPKIDNTMQELGWAPKTTMDD 326
|
Length = 347 |
| >gnl|CDD|187602 cd05344, BKR_like_SDR_like, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR)-like, SDR | Back alignment and domain information |
|---|
Score = 44.2 bits (105), Expect = 3e-05
Identities = 35/154 (22%), Positives = 59/154 (38%), Gaps = 27/154 (17%)
Query: 4 EKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFH 63
K LVT + IG A L + G +V + E ++R A L
Sbjct: 1 GKVALVTAASSGIGLAIARALAREGARVAICA----RNRENLERAASELRAGGAGVLAV- 55
Query: 64 VGDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHP------------FRY-FDNNLI 110
V DL + +D+D+L +A FG + + + P + FD L+
Sbjct: 56 VADLTDPEDIDRLVE----KAGDAFGRVDILVNNAGGPPPGPFAELTDEDWLEAFDLKLL 111
Query: 111 GTINLYQAMAKYNCKK----LVFSSSATIYGQPE 140
I + +A+ ++ +V SS T+ +PE
Sbjct: 112 SVIRIVRAVLPGMKERGWGRIVNISSLTVK-EPE 144
|
This subgroup resembles the SDR family, but does not have a perfect match to the NAD-binding motif or the catalytic tetrad characteristic of the SDRs. It includes the SDRs, Q9HYA2 from Pseudomonas aeruginosa PAO1 and APE0912 from Aeropyrum pernix K1. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253 |
| >gnl|CDD|215720 pfam00106, adh_short, short chain dehydrogenase | Back alignment and domain information |
|---|
Score = 43.3 bits (103), Expect = 3e-05
Identities = 33/152 (21%), Positives = 55/152 (36%), Gaps = 26/152 (17%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHV 64
+L+TGG G +G A L G + +++ + P A + V +L L ++
Sbjct: 1 GTVLITGGTGGLGLALARWLAAEGARHLVLVSRRGPAPGAAELVAELE--ALGAEVTVAA 58
Query: 65 GDLRNKDDLDKLFSSQKFEAVIHFGALKAV----------------AESVQHPFRYFDNN 108
D+ ++D L L + G L V E + R
Sbjct: 59 CDVADRDALAALLA----ALPAALGPLDGVVHNAGVLDDGPLEELTPERFE---RVLAPK 111
Query: 109 LIGTINLYQAMAKYNCKKLV-FSSSATIYGQP 139
+ G NL++ + V FSS A + G P
Sbjct: 112 VTGAWNLHELTRDLDLGAFVLFSSVAGVLGSP 143
|
This family contains a wide variety of dehydrogenases. Length = 167 |
| >gnl|CDD|200381 TIGR04130, FnlA, UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase | Back alignment and domain information |
|---|
Score = 44.6 bits (105), Expect = 4e-05
Identities = 35/137 (25%), Positives = 62/137 (45%), Gaps = 9/137 (6%)
Query: 1 MASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKL 60
M +K +L+TGG G G + L K + I + + D+ KL
Sbjct: 1 MFKDKILLITGGTGSFGNAVLRRFLDTDIKEIRIFSRDEK------KQDDMRKKYNNSKL 54
Query: 61 EFHVGDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMA 120
+F++GD+R+ + L +++ + + H ALK V HP N++GT N+ +A
Sbjct: 55 KFYIGDVRDYRSI--LNATRGVDFIYHAAALKQVPSCEFHPMEAVKTNVLGTENVLEAAI 112
Query: 121 KYNCKKLV-FSSSATIY 136
K++V S+ +Y
Sbjct: 113 ANGVKRVVCLSTDKAVY 129
|
The FnlA enzyme is the first step in the biosynthesis of UDP-FucNAc from UDP-GlcNAc in E. coli (along with FnlB and FnlC). The proteins identified by this model include FnlA homologs in the O-antigen clusters of O4, O25, O26, O29 (Shigella D11), O118, O145 and O172 serotype strains, all of which produce O-antigens containing FucNAc (or the further modified FucNAm). A homolog from Pseudomonas aerugiosa serotype O11, WbjB, also involved in the biosynthesis of UDP-FucNAc has been characterized and is now believed to carry out both the initial 4,6-dehydratase reaction and the subsequent epimerization of the resulting methyl group at C-5. A phylogenetic tree of related sequences shows a distinct clade of enzymes involved in the biosynthesis of UDP-QuiNAc (Qui=qinovosamine). This clade appears to be descendant from the common ancestor of the Pseudomonas and E. coli fucose-biosynthesis enzymes. It has been hypothesized that the first step in the biosynthesis of these two compounds may be the same, and thus that these enzymes all have the same function. At present, lacking sufficient confirmation of this, the current model trusted cutoff only covers the tree segment surrounding the E. coli genes. The clades containing the Pseudomonas and QuiNAc biosynthesis enzymes score above the noise cutoff. Immediately below the noise cutoff are enzymes involved in the biosynthesis of UDP-RhaNAc (Rha=rhamnose), which again may or may not produce the same product. Length = 337 |
| >gnl|CDD|187672 cd09812, 3b-HSD_like_1_SDR_e, 3beta-hydroxysteroid dehydrogenase (3b-HSD)-like, subgroup1, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 44.4 bits (105), Expect = 4e-05
Identities = 76/373 (20%), Positives = 139/373 (37%), Gaps = 95/373 (25%)
Query: 7 ILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGD 66
+L+TGG G+ G L + G V+L D P+ EL + ++F D
Sbjct: 2 VLITGGGGYFGFRLGCALAKSGVHVILFD---IRRPQQ----------ELPEGIKFIQAD 48
Query: 67 LRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKK 126
+R+ L+K + + V H + + + N+ GT N+ Q + +
Sbjct: 49 VRDLSQLEKAVAGV--DCVFHIASYGMSGREQLNRELIEEINVRGTENIIQVCVRRRVPR 106
Query: 127 LVFSSSAT-IYGQPEKIPCVEDFPYGAMNP----YGRTKQWCEEI-----AFDVQKADPE 176
L+++S+ I+G E PY ++ Y RTK E++ +
Sbjct: 107 LIYTSTFNVIFGGQPIRNGDESLPYLPLDLHVDHYSRTKSIAEQLVLKANNMPLPNNGGV 166
Query: 177 WRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSA 236
R LR P G + G+ P+ ++ YI++ + VYG D +
Sbjct: 167 LRTCALR---PAGIYGPGEQRHLPR-----IVSYIEKGLF-----MFVYG------DPKS 207
Query: 237 VRDYIHVMDL-------------ADGCIA----YNLGNGKGISVLEMVAAFEKASGKKIP 279
+ +++HV +L A G IA Y + +G+ ++ E + G P
Sbjct: 208 LVEFVHVDNLVQAHILAAEALTTAKGYIASGQAYFISDGRPVNNFEFFRPLVEGLGYSFP 267
Query: 280 ------------------IKFCPRRVGD-----------ATAV--YAATDKAHKELGWKP 308
+ F + + T V Y + +KA ELG++P
Sbjct: 268 SLRLPLSLVYFFAFLTEMVHFALGPICNFQPLLTRTEVYKTGVTHYFSIEKARAELGYEP 327
Query: 309 K-YGIEDMCAHQW 320
+ + ++D A +W
Sbjct: 328 QPFDLQD--AVEW 338
|
An uncharacterized subgroup of the 3b-HSD-like extended-SDR family. Proteins in this subgroup have the characteristic active site tetrad and NAD(P)-binding motif of extended-SDRs. 3 beta-HSD catalyzes the oxidative conversion of delta 5-3 beta-hydroxysteroids to the delta 4-3-keto configuration; this activity is essential for the biosynthesis of all classes of hormonal steroids. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 339 |
| >gnl|CDD|237218 PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 43.7 bits (104), Expect = 5e-05
Identities = 23/90 (25%), Positives = 41/90 (45%), Gaps = 8/90 (8%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHV 64
+ LVTG A +G AL+L + G VV+ + S EA + + + L ++ +
Sbjct: 7 RVALVTGAARGLGRAIALRLARAGADVVVH---YRSDEEAAEELVEAV-EALGRRAQAVQ 62
Query: 65 GDLRNKDDLDKLFSSQKFEAVIHFGALKAV 94
D+ +K L+ + AV FG + +
Sbjct: 63 ADVTDKAALEAAVA----AAVERFGRIDIL 88
|
Length = 249 |
| >gnl|CDD|235500 PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Score = 43.6 bits (104), Expect = 5e-05
Identities = 38/157 (24%), Positives = 58/157 (36%), Gaps = 26/157 (16%)
Query: 1 MASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKL 60
K LVTG + IG A +L G VV+ N +S A V ++ L K
Sbjct: 2 SLEGKVALVTGASRGIGRAIAERLAAQGANVVI--NYASSEAGAEALVAEIG--ALGGKA 57
Query: 61 EFHVGDLRNKDDLDKLFSSQKFEAVIHFGAL------------KAVAE-SVQHPFRYFDN 107
GD+ + + +++ EA FG + + + R D
Sbjct: 58 LAVQGDVSDAESVERAVD----EAKAEFGGVDILVNNAGITRDNLLMRMKEEDWDRVIDT 113
Query: 108 NLIGTINLYQAMAKYNCKKLV-----FSSSATIYGQP 139
NL G NL +A+A+ K+ SS + G P
Sbjct: 114 NLTGVFNLTKAVARPMMKQRSGRIINISSVVGLMGNP 150
|
Length = 248 |
| >gnl|CDD|187555 cd05244, BVR-B_like_SDR_a, biliverdin IX beta reductase (BVR-B, aka flavin reductase)-like proteins; atypical (a) SDRs | Back alignment and domain information |
|---|
Score = 43.0 bits (102), Expect = 7e-05
Identities = 28/128 (21%), Positives = 47/128 (36%), Gaps = 21/128 (16%)
Query: 6 NILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVG 65
I + G G G+ + L G +V + D K P +KL+ G
Sbjct: 1 KIAIIGATGRTGSAIVREALARGHEVTAL---------VRDPAKL---PAEHEKLKVVQG 48
Query: 66 DLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCK 125
D+ + +D+ + Q +AVI A ++ + GT N+ AM K
Sbjct: 49 DVLDLEDVKEALEGQ--DAVI-------SALGTRNDLSPTTLHSEGTRNIVSAMKAAGVK 99
Query: 126 KLVFSSSA 133
+L+ A
Sbjct: 100 RLIVVGGA 107
|
Human BVR-B catalyzes pyridine nucleotide-dependent production of bilirubin-IX beta during fetal development; in the adult BVR-B has flavin and ferric reductase activities. Human BVR-B catalyzes the reduction of FMN, FAD, and riboflavin. Recognition of flavin occurs mostly by hydrophobic interactions, accounting for the broad substrate specificity. Atypical SDRs are distinct from classical SDRs. BVR-B does not share the key catalytic triad, or conserved tyrosine typical of SDRs. The glycine-rich NADP-binding motif of BVR-B is GXXGXXG, which is similar but not identical to the pattern seen in extended SDRs. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 207 |
| >gnl|CDD|223774 COG0702, COG0702, Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 43.0 bits (101), Expect = 1e-04
Identities = 30/113 (26%), Positives = 40/113 (35%), Gaps = 29/113 (25%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHV 64
ILVTG GF+G +LL G +V AV + A LA +E +
Sbjct: 1 MKILVTGATGFVGGAVVRELLARGHEVRA----------AVRNPEAAA--ALAGGVEVVL 48
Query: 65 GDLRNKDDLDKLF--------------SSQKFEAVIHFGAL---KAVAESVQH 100
GDLR+ L S F AV + +A V+H
Sbjct: 49 GDLRDPKSLVAGAKGVDGVLLISGLLDGSDAFRAVQVTAVVRAAEAAGAGVKH 101
|
Length = 275 |
| >gnl|CDD|181668 PRK09135, PRK09135, pteridine reductase; Provisional | Back alignment and domain information |
|---|
Score = 43.0 bits (102), Expect = 1e-04
Identities = 30/98 (30%), Positives = 40/98 (40%), Gaps = 15/98 (15%)
Query: 1 MASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDL----AGPEL 56
S K L+TGGA IG A L G++V + + H S EA +L G
Sbjct: 3 TDSAKVALITGGARRIGAAIARTLHAAGYRVAI--HYHRSAAEADALAAELNALRPGSAA 60
Query: 57 AKKLEFHVGDLRNKDDLDKLFSSQKFEAVIHFGALKAV 94
A DL + D L +L + V FG L A+
Sbjct: 61 A-----LQADLLDPDALPELVA----ACVAAFGRLDAL 89
|
Length = 249 |
| >gnl|CDD|187643 cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine reductase (KDSR) and related proteins, classical (c) SDR | Back alignment and domain information |
|---|
Score = 41.9 bits (99), Expect = 2e-04
Identities = 36/155 (23%), Positives = 72/155 (46%), Gaps = 28/155 (18%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHV 64
K++L+TGG+ IG A +L++ G V+++ + + EAV+ ++ A +K+ +
Sbjct: 2 KHVLITGGSSGIGKALAKELVKEGANVIIVARSESKLEEAVEEIEAEANAS-GQKVSYIS 60
Query: 65 GDLRNKDDLDKLF--SSQKF---EAVIH---------FGALKAVAESVQHPFRYFDNNLI 110
DL + +++++ F + +K + V++ F L + + R D N
Sbjct: 61 ADLSDYEEVEQAFAQAVEKGGPPDLVVNCAGISIPGLFEDL-----TAEEFERGMDVNYF 115
Query: 111 GTINL----YQAMAKYNCKKLVFSSSAT----IYG 137
G++N+ M + +VF SS IYG
Sbjct: 116 GSLNVAHAVLPLMKEQRPGHIVFVSSQAALVGIYG 150
|
These proteins include members identified as KDSR, ribitol type dehydrogenase, and others. The group shows strong conservation of the active site tetrad and glycine rich NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 239 |
| >gnl|CDD|187616 cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (GlcDH), classical (c) SDRs | Back alignment and domain information |
|---|
Score = 40.8 bits (96), Expect = 4e-04
Identities = 26/90 (28%), Positives = 41/90 (45%), Gaps = 14/90 (15%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEA---VDRVKDLAGPELAKKLE 61
K LVTG + IG A++L G VV+ N + A V+ +K + G +A +
Sbjct: 4 KVALVTGASSGIGKAIAIRLATAGANVVV--NYRSKEDAAEEVVEEIKAVGGKAIAVQ-- 59
Query: 62 FHVGDLRNKDDLDKLFSSQKFEAVIHFGAL 91
D+ ++D+ LF A+ FG L
Sbjct: 60 ---ADVSKEEDVVALFQ----SAIKEFGTL 82
|
GlcDH, is a tetrameric member of the SDR family, it catalyzes the NAD(P)-dependent oxidation of beta-D-glucose to D-glucono-delta-lactone. GlcDH has a typical NAD-binding site glycine-rich pattern as well as the canonical active site tetrad (YXXXK motif plus upstream Ser and Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253 |
| >gnl|CDD|181517 PRK08642, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 40.8 bits (96), Expect = 5e-04
Identities = 24/90 (26%), Positives = 41/90 (45%), Gaps = 11/90 (12%)
Query: 1 MASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKL 60
SE+ +LVTGG+ +G A + G +VV+ N H S A +L +A +
Sbjct: 2 QISEQTVLVTGGSRGLGAAIARAFAREGARVVV--NYHQSEDAAEALADELGDRAIALQ- 58
Query: 61 EFHVGDLRNKDDLDKLFSSQKFEAVIHFGA 90
D+ +++ + +F+ A HFG
Sbjct: 59 ----ADVTDREQVQAMFA----TATEHFGK 80
|
Length = 253 |
| >gnl|CDD|187535 cd02266, SDR, Short-chain dehydrogenases/reductases (SDR) | Back alignment and domain information |
|---|
Score = 40.2 bits (94), Expect = 5e-04
Identities = 23/92 (25%), Positives = 34/92 (36%), Gaps = 12/92 (13%)
Query: 7 ILVTGGAGFIGTHCALQLLQGG-FKVVLIDNLHNSVPEA----VDRVKDLAGPELAKKLE 61
+LVTGG+G IG A L G KV+++ V A R+ DL G + + +
Sbjct: 1 VLVTGGSGGIGGAIARWLASRGSPKVLVVSRRDVVVHNAAILDDGRLIDLTGSRIERAIR 60
Query: 62 FHVGDLRNKDDLDKLFSSQKFE----AVIHFG 89
+V R L + I
Sbjct: 61 ANVVGTRR---LLEAARELMKAKRLGRFILIS 89
|
SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase (KR) domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 186 |
| >gnl|CDD|187598 cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hydroxysteroid dehydrogenase XI-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 40.3 bits (95), Expect = 6e-04
Identities = 18/70 (25%), Positives = 35/70 (50%), Gaps = 5/70 (7%)
Query: 7 ILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGD 66
+L+TGG IG AL+ + G KVV++D E + V+ G K+ ++ D
Sbjct: 2 VLITGGGSGIGRLLALEFAKRGAKVVILDINEKGAEETANNVRKAGG-----KVHYYKCD 56
Query: 67 LRNKDDLDKL 76
+ ++++ +
Sbjct: 57 VSKREEVYEA 66
|
17-beta-hydroxysteroid dehydrogenases (17betaHSD) are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. 17betaHSD type XI, a classical SDR, preferentially converts 3alpha-adiol to androsterone but not numerous other tested steroids. This subgroup of classical SDRs also includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 243 |
| >gnl|CDD|233570 TIGR01777, yfcH, TIGR01777 family protein | Back alignment and domain information |
|---|
Score = 40.7 bits (96), Expect = 7e-04
Identities = 46/183 (25%), Positives = 74/183 (40%), Gaps = 29/183 (15%)
Query: 7 ILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGD 66
IL+TGG GFIG +L + G +V + L S P + + P
Sbjct: 1 ILITGGTGFIGRALTQRLTKRGHEVTI---LTRSPPPGANTKWEGYKPWAG--------- 48
Query: 67 LRNKDDLDKLFSSQKFEAVIHFGALKAVAE---SVQHPFRYFDNNLIGTINLYQAMAKYN 123
+D D L + +AVI+ A + +A+ + + D+ + T L +A+A
Sbjct: 49 ----EDADSL---EGADAVINL-AGEPIADKRWTEERKQEIRDSRIDTTRLLVEAIAAAE 100
Query: 124 CK-KLVFSSSAT-IYGQPEKIPCVEDFPYGAMNPYGRT-KQWCEEIAFDVQKADPEWRII 180
K K+ S+SA YG E E+ + + W EE A + R++
Sbjct: 101 QKPKVFISASAVGYYGPSEDREYTEEDSPAGDDFLAELCRDW-EEAAQAAEDLGT--RVV 157
Query: 181 LLR 183
LLR
Sbjct: 158 LLR 160
|
This model represents a clade of proteins of unknown function including the E. coli yfcH protein [Hypothetical proteins, Conserved]. Length = 291 |
| >gnl|CDD|187620 cd05362, THN_reductase-like_SDR_c, tetrahydroxynaphthalene/trihydroxynaphthalene reductase-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 40.3 bits (95), Expect = 7e-04
Identities = 40/154 (25%), Positives = 60/154 (38%), Gaps = 30/154 (19%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEA---VDRVKDLAGPELAKKLE 61
K LVTG + IG A +L + G VV+ N +S A V ++ G +A +
Sbjct: 4 KVALVTGASRGIGRAIAKRLARDGASVVV--NYASSKAAAEEVVAEIEAAGGKAIAVQ-- 59
Query: 62 FHVGDLRNKDDLDKLFSSQKFEAVIHFGAL------------KAVAESVQHPF-RYFDNN 108
D+ + + +LF A FG + K +AE+ + F R F N
Sbjct: 60 ---ADVSDPSQVARLFD----AAEKAFGGVDILVNNAGVMLKKPIAETSEEEFDRMFTVN 112
Query: 109 LIGTINLYQAMAKY---NCKKLVFSSSATIYGQP 139
G + Q AK + + SSS T P
Sbjct: 113 TKGAFFVLQEAAKRLRDGGRIINISSSLTAAYTP 146
|
1,3,6,8-tetrahydroxynaphthalene reductase (4HNR) of Magnaporthe grisea and the related 1,3,8-trihydroxynaphthalene reductase (3HNR) are typical members of the SDR family containing the canonical glycine rich NAD(P)-binding site and active site tetrad, and function in fungal melanin biosynthesis. This subgroup also includes an SDR from Norway spruce that may function to protect against both biotic and abitoic stress. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243 |
| >gnl|CDD|178259 PLN02653, PLN02653, GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Score = 40.5 bits (95), Expect = 8e-04
Identities = 69/279 (24%), Positives = 109/279 (39%), Gaps = 41/279 (14%)
Query: 59 KLEFHVGDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQA 118
+++ H GDL + L + K + V + A VA S + P D G + L +A
Sbjct: 61 RMKLHYGDLSDASSLRRWLDDIKPDEVYNLAAQSHVAVSFEMPDYTADVVATGALRLLEA 120
Query: 119 -----MAKYNCKKLVFSSSATIYGQ-PEKIPCVEDFPYGAMNPYGRTKQWCEEIAFDVQK 172
K + S+ +YG P P E P+ +PY K + ++
Sbjct: 121 VRLHGQETGRQIKYYQAGSSEMYGSTPP--PQSETTPFHPRSPYAVAKVAAHWYTVNYRE 178
Query: 173 ADPEWRI--ILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYP 230
A + IL FN HES + GE+ + + + ++ VG +L + G
Sbjct: 179 AYGLFACNGIL---FN----HESPRRGEN--FVTRKITRAVGRIKVGLQKKLFL-GNLDA 228
Query: 231 TKDGSAVRDYIHVMDL---ADGCIAYNLGNGKGISVLEMV-AAFEKA--SGKKI----PI 280
++D DY+ M L + Y + + +V E + AF + K P
Sbjct: 229 SRDWGFAGDYVEAMWLMLQQEKPDDYVVATEESHTVEEFLEEAFGYVGLNWKDHVEIDPR 288
Query: 281 KFCPRRV----GDATAVYAATDKAHKELGWKPKYGIEDM 315
F P V GDA+ KA + LGWKPK G E +
Sbjct: 289 YFRPAEVDNLKGDAS-------KAREVLGWKPKVGFEQL 320
|
Length = 340 |
| >gnl|CDD|178047 PLN02427, PLN02427, UDP-apiose/xylose synthase | Back alignment and domain information |
|---|
Score = 39.8 bits (93), Expect = 0.001
Identities = 77/365 (21%), Positives = 141/365 (38%), Gaps = 71/365 (19%)
Query: 7 ILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGD 66
I + G GFIG+H +L+ VL +++N + + + + + +++FH +
Sbjct: 17 ICMIGAGGFIGSHLCEKLMTETPHKVLALDVYN---DKIKHLLEPDTVPWSGRIQFHRIN 73
Query: 67 LRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKY---N 123
+++ L+ L + I+ A+ A+ P +N I + + KY N
Sbjct: 74 IKHDSRLEGLIKMA--DLTINLAAICTPADYNTRPLDTIYSNFIDAL----PVVKYCSEN 127
Query: 124 CKKLVFSSSATIYGQ------PEKIPCVEDFPYGAMN----------------PYGRTKQ 161
K+L+ S+ +YG+ P+ P +D + + Y KQ
Sbjct: 128 NKRLIHFSTCEVYGKTIGSFLPKDHPLRQDPAFYVLKEDESPCIFGSIEKQRWSYACAKQ 187
Query: 162 WCEEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGED--PKGIPNNLMPYIQQVAVGRH 219
E + + + A+ ++R FN +G G D +G+P L + +
Sbjct: 188 LIERLIY-AEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRREP 246
Query: 220 PELNVYGQDYPT----KDG-SAVRDYIHVMDLADGCIAYNLGNGKG-ISVLE----MVAA 269
+L GQ T KD AV I A+G I +N+GN ++V + M
Sbjct: 247 LKLVDGGQSQRTFVYIKDAIEAVLLMIENPARANGHI-FNVGNPNNEVTVRQLAEMMTEV 305
Query: 270 FEKASGK---KIPIKFCP-------------RRVGDATAVYAATDKAHKELGWKPKYGIE 313
+ K SG+ + P +R+ D T + +K+LGW PK +
Sbjct: 306 YAKVSGEPALEEPTVDVSSKEFYGEGYDDSDKRIPDMTII-------NKQLGWNPKTSLW 358
Query: 314 DMCAH 318
D+
Sbjct: 359 DLLES 363
|
Length = 386 |
| >gnl|CDD|187553 cd05242, SDR_a8, atypical (a) SDRs, subgroup 8 | Back alignment and domain information |
|---|
Score = 39.5 bits (93), Expect = 0.002
Identities = 41/185 (22%), Positives = 68/185 (36%), Gaps = 32/185 (17%)
Query: 6 NILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVG 65
I++TGG GFIG +L G +VV++ R G
Sbjct: 1 KIVITGGTGFIGRALTRRLTAAGHEVVVL-----------SRR---PGKAEGLAEVITWD 46
Query: 66 DLRNKDDLDKLFSSQKFEAVIHFGALKAVA-----ESVQHPFRYFDNNLIGTINLYQAMA 120
L +L + +AVI+ A + +A E+ + + + T L +A+A
Sbjct: 47 GL--SLGPWELPGA---DAVINL-AGEPIACRRWTEANKKEIL--SSRIESTRVLVEAIA 98
Query: 121 KYN--CKKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKADPEWR 178
K L+ +S+ YG E+ P G K W E+ A + R
Sbjct: 99 NAPAPPKVLISASAVGYYGHSGDEVLTENSPSGKDFLAEVCKAW-EKAAQPASELGT--R 155
Query: 179 IILLR 183
+++LR
Sbjct: 156 VVILR 160
|
This subgroup contains atypical SDRs of unknown function. Proteins in this subgroup have a glycine-rich NAD(P)-binding motif consensus that resembles that of the extended SDRs, (GXXGXXG or GGXGXXG), but lacks the characteristic active site residues of the SDRs. A Cys often replaces the usual Lys of the YXXXK active site motif, while the upstream Ser is generally present and Arg replaces the usual Asn. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 296 |
| >gnl|CDD|187617 cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_coenzyme A_reductase (ChcA)_like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 38.9 bits (91), Expect = 0.002
Identities = 31/124 (25%), Positives = 55/124 (44%), Gaps = 13/124 (10%)
Query: 8 LVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDL 67
LVTGG+ IG AL+L + G VV+ N S A + ++ EL K D+
Sbjct: 2 LVTGGSRGIGKAIALRLAERGADVVI--NYRKSKDAAAEVAAEIE--ELGGKAVVVRADV 57
Query: 68 RNKDDLDKLFSS--QKFEAVIHF------GALKAVAESVQHPFRY-FDNNLIGTINLYQA 118
D++++F++ ++F + GA + ++E + + NL ++ Q
Sbjct: 58 SQPQDVEEMFAAVKERFGRLDVLVSNAAAGAFRPLSELTPAHWDAKMNTNLKALVHCAQQ 117
Query: 119 MAKY 122
AK
Sbjct: 118 AAKL 121
|
This subgroup contains classical SDR proteins, including members identified as 1-cyclohexenylcarbonyl coenzyme A reductase. ChcA of Streptomyces collinus is implicated in the final reduction step of shikimic acid to ansatrienin. ChcA shows sequence similarity to the SDR family of NAD-binding proteins, but it lacks the conserved Tyr of the characteristic catalytic site. This subgroup also contains the NADH-dependent enoyl-[acyl-carrier-protein(ACP)] reductase FabL from Bacillus subtilis. This enzyme participates in bacterial fatty acid synthesis, in type II fatty-acid synthases and catalyzes the last step in each elongation cycle. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242 |
| >gnl|CDD|235506 PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 38.7 bits (91), Expect = 0.002
Identities = 22/90 (24%), Positives = 42/90 (46%), Gaps = 10/90 (11%)
Query: 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLH-NSVPEAVDRVKDLAGPELAKKLE 61
K +VTG +G IG A L + G KVV+ +++ + E ++ +K+ G
Sbjct: 4 MGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGG-----DAI 58
Query: 62 FHVGDLRNKDDLDKLFSSQKFEAVIHFGAL 91
D+ +++D++ L + V FG +
Sbjct: 59 AVKADVSSEEDVENLVE----QIVEKFGKI 84
|
Length = 247 |
| >gnl|CDD|131468 TIGR02415, 23BDH, acetoin reductases | Back alignment and domain information |
|---|
Score = 38.6 bits (90), Expect = 0.002
Identities = 26/87 (29%), Positives = 36/87 (41%), Gaps = 9/87 (10%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHV 64
K LVTGGA IG A +L + GF V + D + E + G +A KL
Sbjct: 1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKL---- 56
Query: 65 GDLRNKDDLDKLFSSQKFEAVIHFGAL 91
D+ +KD + +A FG
Sbjct: 57 -DVSDKDQVFSAID----QAAEKFGGF 78
|
One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PMID:11577733) [Energy metabolism, Fermentation]. Length = 254 |
| >gnl|CDD|187635 cd08930, SDR_c8, classical (c) SDR, subgroup 8 | Back alignment and domain information |
|---|
Score = 38.5 bits (90), Expect = 0.003
Identities = 31/151 (20%), Positives = 56/151 (37%), Gaps = 22/151 (14%)
Query: 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEF 62
+K IL+TG AG IG LL G +++L D ++ + + + +L ++
Sbjct: 1 EDKIILITGAAGLIGKAFCKALLSAGARLILADINAPALEQLKEELTNLYK----NRVIA 56
Query: 63 HVGDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDN------------NLI 110
D+ +K+ + +L S + + S + F+ NL
Sbjct: 57 LELDITSKESIKELIESYLEKFGRIDILINNAYPSPKVWGSRFEEFPYEQWNEVLNVNLG 116
Query: 111 GTINLYQA----MAKYNCKKLVFSSSATIYG 137
G QA K ++ +S IYG
Sbjct: 117 GAFLCSQAFIKLFKKQGKGSIINIAS--IYG 145
|
This subgroup has a fairly well conserved active site tetrad and domain size of the classical SDRs, but has an atypical NAD-binding motif ([ST]G[GA]XGXXG). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250 |
| >gnl|CDD|187577 cd05267, SDR_a6, atypical (a) SDRs, subgroup 6 | Back alignment and domain information |
|---|
Score = 38.1 bits (89), Expect = 0.003
Identities = 34/140 (24%), Positives = 48/140 (34%), Gaps = 27/140 (19%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHV 64
K +L+ G G I LL+ V L L N+ R+ L +E
Sbjct: 1 KKVLILGANGEIAREATTMLLENS-NVELTLFLRNA-----HRLLHLK-SARVTVVE--- 50
Query: 65 GDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNC 124
GD N DDL Q + + L Q N+ QAM
Sbjct: 51 GDALNSDDLKAAMRGQD----VVYANLGGTDLDQQ------------AENVVQAMKAVGV 94
Query: 125 KKLVFSSSATIY-GQPEKIP 143
K+L++++S IY P K
Sbjct: 95 KRLIWTTSLGIYDEVPGKFG 114
|
These atypical SDR family members of unknown function have only a partial match to a prototypical glycine-rich NAD(P)-binding motif consensus, GXXG, which conserves part of the motif of extended SDR. Furthermore, they lack the characteristic active site residues of the SDRs. This subgroup is related to phenylcoumaran benzylic ether reductase, an NADPH-dependent aromatic alcohol reductase. One member is identified as a putative NAD-dependent epimerase/dehydratase. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 203 |
| >gnl|CDD|183833 PRK12939, PRK12939, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 38.4 bits (90), Expect = 0.003
Identities = 21/90 (23%), Positives = 30/90 (33%), Gaps = 9/90 (10%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHV 64
K LVTG A +G A L + G V D L E ++ G +
Sbjct: 8 KRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGG-----RAHAIA 62
Query: 65 GDLRNKDDLDKLFSSQKFEAVIHFGALKAV 94
DL + + + F A G L +
Sbjct: 63 ADLADPASVQRFFD----AAAAALGGLDGL 88
|
Length = 250 |
| >gnl|CDD|187636 cd08931, SDR_c9, classical (c) SDR, subgroup 9 | Back alignment and domain information |
|---|
Score = 38.2 bits (89), Expect = 0.003
Identities = 41/158 (25%), Positives = 60/158 (37%), Gaps = 36/158 (22%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRV--KDLAGPELAKKLEF 62
K I +TG A IG AL + G+ V L D +D LA A+ +
Sbjct: 1 KAIFITGAASGIGRETALLFARNGWFVGLYD---------IDEDGLAALAAELGAENVVA 51
Query: 63 HVGDLRNKDD---------------LDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDN 107
D+ ++ LD LF++ V G + V + R D
Sbjct: 52 GALDVTDRAAWAAALADFAAATGGRLDALFNNA---GVGRGGPFEDV--PLAAHDRMVDI 106
Query: 108 NLIGTIN-LYQAMA--KYNCKKLVF--SSSATIYGQPE 140
N+ G +N Y A+ K V +SS+ IYGQP+
Sbjct: 107 NVKGVLNGAYAALPYLKATPGARVINTASSSAIYGQPD 144
|
This subgroup has the canonical active site tetrad and NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 227 |
| >gnl|CDD|234212 TIGR03443, alpha_am_amid, L-aminoadipate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 38.9 bits (91), Expect = 0.004
Identities = 40/153 (26%), Positives = 63/153 (41%), Gaps = 36/153 (23%)
Query: 3 SEKNILVTGGAGFIGTHCALQLL----QGGFKVVLIDNLH---NSVPEAVDRVKDLAG-- 53
+ + +TG GF+G+ LL FKV H S ++R++ G
Sbjct: 970 TPITVFLTGATGFLGSFILRDLLTRRSNSNFKVF----AHVRAKSEEAGLERLRK-TGTT 1024
Query: 54 -----PELAKKLEFHVGDLR------NKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPF 102
E A ++E +GDL + + L + + + +IH GAL V +
Sbjct: 1025 YGIWDEEWASRIEVVLGDLSKEKFGLSDEKWSDL--TNEVDVIIHNGAL------VHWVY 1076
Query: 103 RYF---DNNLIGTINLYQAMAKYNCKKLVFSSS 132
Y D N+IGTIN+ A+ K+ F SS
Sbjct: 1077 PYSKLRDANVIGTINVLNLCAEGKAKQFSFVSS 1109
|
Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal. Length = 1389 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 335 | |||
| COG1087 | 329 | GalE UDP-glucose 4-epimerase [Cell envelope biogen | 100.0 | |
| COG1088 | 340 | RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope | 100.0 | |
| KOG1371 | 343 | consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo | 100.0 | |
| PLN02240 | 352 | UDP-glucose 4-epimerase | 100.0 | |
| PRK15181 | 348 | Vi polysaccharide biosynthesis protein TviC; Provi | 100.0 | |
| PRK10675 | 338 | UDP-galactose-4-epimerase; Provisional | 100.0 | |
| TIGR01472 | 343 | gmd GDP-mannose 4,6-dehydratase. Excluded from thi | 100.0 | |
| PLN02166 | 436 | dTDP-glucose 4,6-dehydratase | 100.0 | |
| PRK10217 | 355 | dTDP-glucose 4,6-dehydratase; Provisional | 100.0 | |
| TIGR02622 | 349 | CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member | 100.0 | |
| PLN02653 | 340 | GDP-mannose 4,6-dehydratase | 100.0 | |
| PLN02206 | 442 | UDP-glucuronate decarboxylase | 100.0 | |
| PRK11908 | 347 | NAD-dependent epimerase/dehydratase family protein | 100.0 | |
| PLN02427 | 386 | UDP-apiose/xylose synthase | 100.0 | |
| PLN02572 | 442 | UDP-sulfoquinovose synthase | 100.0 | |
| KOG0747 | 331 | consensus Putative NAD+-dependent epimerases [Carb | 100.0 | |
| PLN02695 | 370 | GDP-D-mannose-3',5'-epimerase | 100.0 | |
| PRK10084 | 352 | dTDP-glucose 4,6 dehydratase; Provisional | 100.0 | |
| PLN02260 | 668 | probable rhamnose biosynthetic enzyme | 100.0 | |
| PRK08125 | 660 | bifunctional UDP-glucuronic acid decarboxylase/UDP | 100.0 | |
| TIGR01179 | 328 | galE UDP-glucose-4-epimerase. This enzyme intercon | 100.0 | |
| KOG1429 | 350 | consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro | 100.0 | |
| TIGR01181 | 317 | dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This | 100.0 | |
| PRK09987 | 299 | dTDP-4-dehydrorhamnose reductase; Provisional | 100.0 | |
| PLN02214 | 342 | cinnamoyl-CoA reductase | 100.0 | |
| PLN02725 | 306 | GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas | 100.0 | |
| PLN02989 | 325 | cinnamyl-alcohol dehydrogenase family protein | 100.0 | |
| PRK11150 | 308 | rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro | 100.0 | |
| PLN00198 | 338 | anthocyanidin reductase; Provisional | 100.0 | |
| PLN02662 | 322 | cinnamyl-alcohol dehydrogenase family protein | 100.0 | |
| PLN02896 | 353 | cinnamyl-alcohol dehydrogenase | 100.0 | |
| TIGR02197 | 314 | heptose_epim ADP-L-glycero-D-manno-heptose-6-epime | 100.0 | |
| PLN02650 | 351 | dihydroflavonol-4-reductase | 100.0 | |
| COG0451 | 314 | WcaG Nucleoside-diphosphate-sugar epimerases [Cell | 100.0 | |
| PLN02986 | 322 | cinnamyl-alcohol dehydrogenase family protein | 100.0 | |
| COG1089 | 345 | Gmd GDP-D-mannose dehydratase [Cell envelope bioge | 100.0 | |
| TIGR03466 | 328 | HpnA hopanoid-associated sugar epimerase. The sequ | 100.0 | |
| PF04321 | 286 | RmlD_sub_bind: RmlD substrate binding domain; Inte | 100.0 | |
| TIGR03589 | 324 | PseB UDP-N-acetylglucosamine 4,6-dehydratase. This | 100.0 | |
| TIGR01214 | 287 | rmlD dTDP-4-dehydrorhamnose reductase. This enzyme | 100.0 | |
| PLN00016 | 378 | RNA-binding protein; Provisional | 100.0 | |
| COG1091 | 281 | RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo | 100.0 | |
| KOG1502 | 327 | consensus Flavonol reductase/cinnamoyl-CoA reducta | 100.0 | |
| KOG1430 | 361 | consensus C-3 sterol dehydrogenase/3-beta-hydroxys | 100.0 | |
| PF01073 | 280 | 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso | 100.0 | |
| PLN02686 | 367 | cinnamoyl-CoA reductase | 100.0 | |
| KOG1431 | 315 | consensus GDP-L-fucose synthetase [Carbohydrate tr | 100.0 | |
| PF01370 | 236 | Epimerase: NAD dependent epimerase/dehydratase fam | 100.0 | |
| CHL00194 | 317 | ycf39 Ycf39; Provisional | 100.0 | |
| COG1086 | 588 | Predicted nucleoside-diphosphate sugar epimerases | 100.0 | |
| PRK05865 | 854 | hypothetical protein; Provisional | 100.0 | |
| PF02719 | 293 | Polysacc_synt_2: Polysaccharide biosynthesis prote | 100.0 | |
| TIGR01777 | 292 | yfcH conserved hypothetical protein TIGR01777. Thi | 100.0 | |
| PLN02996 | 491 | fatty acyl-CoA reductase | 100.0 | |
| PLN02778 | 298 | 3,5-epimerase/4-reductase | 100.0 | |
| PRK07201 | 657 | short chain dehydrogenase; Provisional | 100.0 | |
| PLN02583 | 297 | cinnamoyl-CoA reductase | 100.0 | |
| KOG1372 | 376 | consensus GDP-mannose 4,6 dehydratase [Carbohydrat | 99.97 | |
| PLN02657 | 390 | 3,8-divinyl protochlorophyllide a 8-vinyl reductas | 99.97 | |
| COG1090 | 297 | Predicted nucleoside-diphosphate sugar epimerase [ | 99.97 | |
| PLN02260 | 668 | probable rhamnose biosynthetic enzyme | 99.96 | |
| PLN02503 | 605 | fatty acyl-CoA reductase 2 | 99.96 | |
| TIGR01746 | 367 | Thioester-redct thioester reductase domain. It has | 99.96 | |
| PRK12320 | 699 | hypothetical protein; Provisional | 99.94 | |
| PF07993 | 249 | NAD_binding_4: Male sterility protein; InterPro: I | 99.94 | |
| PRK06482 | 276 | short chain dehydrogenase; Provisional | 99.93 | |
| TIGR03649 | 285 | ergot_EASG ergot alkaloid biosynthesis protein, AF | 99.92 | |
| COG3320 | 382 | Putative dehydrogenase domain of multifunctional n | 99.92 | |
| PRK13394 | 262 | 3-hydroxybutyrate dehydrogenase; Provisional | 99.92 | |
| TIGR03443 | 1389 | alpha_am_amid L-aminoadipate-semialdehyde dehydrog | 99.91 | |
| PRK09135 | 249 | pteridine reductase; Provisional | 99.91 | |
| PRK12429 | 258 | 3-hydroxybutyrate dehydrogenase; Provisional | 99.91 | |
| PRK06194 | 287 | hypothetical protein; Provisional | 99.91 | |
| PRK12825 | 249 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.9 | |
| KOG2865 | 391 | consensus NADH:ubiquinone oxidoreductase, NDUFA9/3 | 99.9 | |
| PRK05875 | 276 | short chain dehydrogenase; Provisional | 99.9 | |
| PRK12826 | 251 | 3-ketoacyl-(acyl-carrier-protein) reductase; Revie | 99.9 | |
| KOG2774 | 366 | consensus NAD dependent epimerase [General functio | 99.89 | |
| TIGR01963 | 255 | PHB_DH 3-hydroxybutyrate dehydrogenase. This model | 99.89 | |
| PRK08263 | 275 | short chain dehydrogenase; Provisional | 99.89 | |
| PLN00141 | 251 | Tic62-NAD(P)-related group II protein; Provisional | 99.89 | |
| PRK05876 | 275 | short chain dehydrogenase; Provisional | 99.89 | |
| PRK07067 | 257 | sorbitol dehydrogenase; Provisional | 99.89 | |
| PRK07774 | 250 | short chain dehydrogenase; Provisional | 99.88 | |
| PRK12829 | 264 | short chain dehydrogenase; Provisional | 99.88 | |
| PRK12745 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 99.88 | |
| PRK06180 | 277 | short chain dehydrogenase; Provisional | 99.88 | |
| PRK05653 | 246 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.88 | |
| PRK07074 | 257 | short chain dehydrogenase; Provisional | 99.88 | |
| PRK05717 | 255 | oxidoreductase; Validated | 99.88 | |
| PRK06914 | 280 | short chain dehydrogenase; Provisional | 99.88 | |
| PRK07890 | 258 | short chain dehydrogenase; Provisional | 99.88 | |
| PRK12384 | 259 | sorbitol-6-phosphate dehydrogenase; Provisional | 99.88 | |
| PRK07453 | 322 | protochlorophyllide oxidoreductase; Validated | 99.88 | |
| PRK07523 | 255 | gluconate 5-dehydrogenase; Provisional | 99.88 | |
| PRK08063 | 250 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.88 | |
| PRK07775 | 274 | short chain dehydrogenase; Provisional | 99.87 | |
| PRK12746 | 254 | short chain dehydrogenase; Provisional | 99.87 | |
| PRK06128 | 300 | oxidoreductase; Provisional | 99.87 | |
| PRK06077 | 252 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.87 | |
| COG0300 | 265 | DltE Short-chain dehydrogenases of various substra | 99.87 | |
| PRK05993 | 277 | short chain dehydrogenase; Provisional | 99.87 | |
| PRK12935 | 247 | acetoacetyl-CoA reductase; Provisional | 99.87 | |
| PRK07231 | 251 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.87 | |
| PRK09186 | 256 | flagellin modification protein A; Provisional | 99.87 | |
| PRK07806 | 248 | short chain dehydrogenase; Provisional | 99.87 | |
| PRK06179 | 270 | short chain dehydrogenase; Provisional | 99.87 | |
| PRK06196 | 315 | oxidoreductase; Provisional | 99.86 | |
| PRK12827 | 249 | short chain dehydrogenase; Provisional | 99.86 | |
| PF13460 | 183 | NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X | 99.86 | |
| COG4221 | 246 | Short-chain alcohol dehydrogenase of unknown speci | 99.86 | |
| PRK12828 | 239 | short chain dehydrogenase; Provisional | 99.86 | |
| PRK09134 | 258 | short chain dehydrogenase; Provisional | 99.86 | |
| PRK06138 | 252 | short chain dehydrogenase; Provisional | 99.86 | |
| TIGR03206 | 250 | benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr | 99.86 | |
| PRK12823 | 260 | benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat | 99.86 | |
| PLN02253 | 280 | xanthoxin dehydrogenase | 99.86 | |
| PRK07024 | 257 | short chain dehydrogenase; Provisional | 99.85 | |
| PLN03209 | 576 | translocon at the inner envelope of chloroplast su | 99.85 | |
| PRK06182 | 273 | short chain dehydrogenase; Validated | 99.85 | |
| PRK07060 | 245 | short chain dehydrogenase; Provisional | 99.85 | |
| PRK12939 | 250 | short chain dehydrogenase; Provisional | 99.85 | |
| KOG1221 | 467 | consensus Acyl-CoA reductase [Lipid transport and | 99.85 | |
| PRK05854 | 313 | short chain dehydrogenase; Provisional | 99.85 | |
| PRK06197 | 306 | short chain dehydrogenase; Provisional | 99.85 | |
| PRK08213 | 259 | gluconate 5-dehydrogenase; Provisional | 99.84 | |
| PRK05557 | 248 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.84 | |
| PRK07985 | 294 | oxidoreductase; Provisional | 99.84 | |
| PRK08628 | 258 | short chain dehydrogenase; Provisional | 99.84 | |
| PRK12747 | 252 | short chain dehydrogenase; Provisional | 99.84 | |
| PRK06500 | 249 | short chain dehydrogenase; Provisional | 99.84 | |
| PRK06101 | 240 | short chain dehydrogenase; Provisional | 99.84 | |
| PRK08643 | 256 | acetoin reductase; Validated | 99.83 | |
| PRK08219 | 227 | short chain dehydrogenase; Provisional | 99.83 | |
| PRK06398 | 258 | aldose dehydrogenase; Validated | 99.83 | |
| PRK06701 | 290 | short chain dehydrogenase; Provisional | 99.83 | |
| PRK07063 | 260 | short chain dehydrogenase; Provisional | 99.83 | |
| PRK07102 | 243 | short chain dehydrogenase; Provisional | 99.83 | |
| PRK08217 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.83 | |
| PRK07454 | 241 | short chain dehydrogenase; Provisional | 99.83 | |
| PRK08085 | 254 | gluconate 5-dehydrogenase; Provisional | 99.83 | |
| PRK07814 | 263 | short chain dehydrogenase; Provisional | 99.83 | |
| KOG1205 | 282 | consensus Predicted dehydrogenase [Secondary metab | 99.83 | |
| PRK07666 | 239 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.83 | |
| PRK08267 | 260 | short chain dehydrogenase; Provisional | 99.83 | |
| PRK07478 | 254 | short chain dehydrogenase; Provisional | 99.83 | |
| PRK10538 | 248 | malonic semialdehyde reductase; Provisional | 99.83 | |
| PRK08264 | 238 | short chain dehydrogenase; Validated | 99.83 | |
| PRK08339 | 263 | short chain dehydrogenase; Provisional | 99.83 | |
| PRK05866 | 293 | short chain dehydrogenase; Provisional | 99.83 | |
| PRK09291 | 257 | short chain dehydrogenase; Provisional | 99.83 | |
| PRK06172 | 253 | short chain dehydrogenase; Provisional | 99.83 | |
| PRK08589 | 272 | short chain dehydrogenase; Validated | 99.83 | |
| PRK08265 | 261 | short chain dehydrogenase; Provisional | 99.83 | |
| PRK06523 | 260 | short chain dehydrogenase; Provisional | 99.83 | |
| PRK07326 | 237 | short chain dehydrogenase; Provisional | 99.83 | |
| TIGR01832 | 248 | kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod | 99.83 | |
| PRK06181 | 263 | short chain dehydrogenase; Provisional | 99.83 | |
| PRK05693 | 274 | short chain dehydrogenase; Provisional | 99.82 | |
| PRK08277 | 278 | D-mannonate oxidoreductase; Provisional | 99.82 | |
| PRK08642 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.82 | |
| PRK09242 | 257 | tropinone reductase; Provisional | 99.82 | |
| PRK06949 | 258 | short chain dehydrogenase; Provisional | 99.82 | |
| PRK07097 | 265 | gluconate 5-dehydrogenase; Provisional | 99.82 | |
| PRK06935 | 258 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 99.82 | |
| PRK08324 | 681 | short chain dehydrogenase; Validated | 99.82 | |
| PRK06463 | 255 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.82 | |
| PRK08251 | 248 | short chain dehydrogenase; Provisional | 99.82 | |
| PRK08220 | 252 | 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | 99.82 | |
| PRK07035 | 252 | short chain dehydrogenase; Provisional | 99.82 | |
| PRK08017 | 256 | oxidoreductase; Provisional | 99.82 | |
| PRK07904 | 253 | short chain dehydrogenase; Provisional | 99.82 | |
| PRK12744 | 257 | short chain dehydrogenase; Provisional | 99.82 | |
| PRK12743 | 256 | oxidoreductase; Provisional | 99.82 | |
| PRK06123 | 248 | short chain dehydrogenase; Provisional | 99.82 | |
| PRK07825 | 273 | short chain dehydrogenase; Provisional | 99.81 | |
| PRK07577 | 234 | short chain dehydrogenase; Provisional | 99.81 | |
| PRK08703 | 239 | short chain dehydrogenase; Provisional | 99.81 | |
| PRK07109 | 334 | short chain dehydrogenase; Provisional | 99.81 | |
| PRK05650 | 270 | short chain dehydrogenase; Provisional | 99.81 | |
| PRK12748 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 99.81 | |
| PRK12937 | 245 | short chain dehydrogenase; Provisional | 99.81 | |
| PRK06139 | 330 | short chain dehydrogenase; Provisional | 99.81 | |
| PRK06113 | 255 | 7-alpha-hydroxysteroid dehydrogenase; Validated | 99.81 | |
| PRK07856 | 252 | short chain dehydrogenase; Provisional | 99.81 | |
| PRK08945 | 247 | putative oxoacyl-(acyl carrier protein) reductase; | 99.81 | |
| PRK12481 | 251 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 99.81 | |
| PRK09730 | 247 | putative NAD(P)-binding oxidoreductase; Provisiona | 99.81 | |
| PRK06114 | 254 | short chain dehydrogenase; Provisional | 99.81 | |
| PRK06124 | 256 | gluconate 5-dehydrogenase; Provisional | 99.81 | |
| PRK06057 | 255 | short chain dehydrogenase; Provisional | 99.81 | |
| PRK06841 | 255 | short chain dehydrogenase; Provisional | 99.81 | |
| PRK06200 | 263 | 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog | 99.81 | |
| PRK06171 | 266 | sorbitol-6-phosphate 2-dehydrogenase; Provisional | 99.8 | |
| PRK07576 | 264 | short chain dehydrogenase; Provisional | 99.8 | |
| PRK08993 | 253 | 2-deoxy-D-gluconate 3-dehydrogenase; Validated | 99.8 | |
| PRK07677 | 252 | short chain dehydrogenase; Provisional | 99.8 | |
| PRK08278 | 273 | short chain dehydrogenase; Provisional | 99.8 | |
| PRK12938 | 246 | acetyacetyl-CoA reductase; Provisional | 99.8 | |
| PF05368 | 233 | NmrA: NmrA-like family; InterPro: IPR008030 NmrA i | 99.8 | |
| PRK07023 | 243 | short chain dehydrogenase; Provisional | 99.8 | |
| PRK06953 | 222 | short chain dehydrogenase; Provisional | 99.8 | |
| PRK08226 | 263 | short chain dehydrogenase; Provisional | 99.8 | |
| PRK12824 | 245 | acetoacetyl-CoA reductase; Provisional | 99.8 | |
| TIGR03325 | 262 | BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro | 99.8 | |
| TIGR01289 | 314 | LPOR light-dependent protochlorophyllide reductase | 99.8 | |
| PRK07062 | 265 | short chain dehydrogenase; Provisional | 99.8 | |
| TIGR01830 | 239 | 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re | 99.8 | |
| PRK12936 | 245 | 3-ketoacyl-(acyl-carrier-protein) reductase NodG; | 99.8 | |
| PRK07831 | 262 | short chain dehydrogenase; Provisional | 99.79 | |
| PRK05867 | 253 | short chain dehydrogenase; Provisional | 99.79 | |
| PRK12742 | 237 | oxidoreductase; Provisional | 99.79 | |
| PRK05565 | 247 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.79 | |
| PRK06483 | 236 | dihydromonapterin reductase; Provisional | 99.79 | |
| PRK06079 | 252 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.79 | |
| PRK06505 | 271 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.79 | |
| PRK06198 | 260 | short chain dehydrogenase; Provisional | 99.79 | |
| PRK06947 | 248 | glucose-1-dehydrogenase; Provisional | 99.79 | |
| PRK08416 | 260 | 7-alpha-hydroxysteroid dehydrogenase; Provisional | 99.79 | |
| PRK05872 | 296 | short chain dehydrogenase; Provisional | 99.79 | |
| PRK06550 | 235 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.79 | |
| PRK08936 | 261 | glucose-1-dehydrogenase; Provisional | 99.78 | |
| PRK07041 | 230 | short chain dehydrogenase; Provisional | 99.78 | |
| PRK07069 | 251 | short chain dehydrogenase; Validated | 99.78 | |
| TIGR02415 | 254 | 23BDH acetoin reductases. One member of this famil | 99.78 | |
| PRK07832 | 272 | short chain dehydrogenase; Provisional | 99.78 | |
| PRK05786 | 238 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.77 | |
| PRK08594 | 257 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.77 | |
| PRK09072 | 263 | short chain dehydrogenase; Provisional | 99.77 | |
| TIGR01829 | 242 | AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy | 99.77 | |
| PRK07984 | 262 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.77 | |
| PRK07791 | 286 | short chain dehydrogenase; Provisional | 99.77 | |
| PRK08177 | 225 | short chain dehydrogenase; Provisional | 99.77 | |
| PRK08340 | 259 | glucose-1-dehydrogenase; Provisional | 99.77 | |
| PRK08415 | 274 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.77 | |
| PRK06940 | 275 | short chain dehydrogenase; Provisional | 99.77 | |
| PRK05855 | 582 | short chain dehydrogenase; Validated | 99.77 | |
| PRK07792 | 306 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.77 | |
| PRK06125 | 259 | short chain dehydrogenase; Provisional | 99.77 | |
| PRK06924 | 251 | short chain dehydrogenase; Provisional | 99.76 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 99.76 | |
| KOG1201 | 300 | consensus Hydroxysteroid 17-beta dehydrogenase 11 | 99.76 | |
| PRK07370 | 258 | enoyl-(acyl carrier protein) reductase; Validated | 99.76 | |
| PLN02780 | 320 | ketoreductase/ oxidoreductase | 99.76 | |
| PRK07201 | 657 | short chain dehydrogenase; Provisional | 99.76 | |
| TIGR01831 | 239 | fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas | 99.76 | |
| PRK07533 | 258 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.75 | |
| PRK05884 | 223 | short chain dehydrogenase; Provisional | 99.75 | |
| PRK08690 | 261 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.75 | |
| PRK08159 | 272 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.75 | |
| PRK12859 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 99.75 | |
| PRK08303 | 305 | short chain dehydrogenase; Provisional | 99.75 | |
| PRK06603 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.75 | |
| PRK06997 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.74 | |
| TIGR02685 | 267 | pter_reduc_Leis pteridine reductase. Pteridine red | 99.74 | |
| PF00106 | 167 | adh_short: short chain dehydrogenase alcohol dehyd | 99.73 | |
| TIGR02632 | 676 | RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc | 99.73 | |
| PRK07889 | 256 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.73 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 99.73 | |
| PRK05599 | 246 | hypothetical protein; Provisional | 99.73 | |
| PRK08862 | 227 | short chain dehydrogenase; Provisional | 99.73 | |
| smart00822 | 180 | PKS_KR This enzymatic domain is part of bacterial | 99.72 | |
| PRK07578 | 199 | short chain dehydrogenase; Provisional | 99.72 | |
| PLN00015 | 308 | protochlorophyllide reductase | 99.72 | |
| KOG1208 | 314 | consensus Dehydrogenases with different specificit | 99.72 | |
| PRK12367 | 245 | short chain dehydrogenase; Provisional | 99.72 | |
| TIGR01500 | 256 | sepiapter_red sepiapterin reductase. This model de | 99.71 | |
| KOG0725 | 270 | consensus Reductases with broad range of substrate | 99.7 | |
| PRK07424 | 406 | bifunctional sterol desaturase/short chain dehydro | 99.69 | |
| COG0702 | 275 | Predicted nucleoside-diphosphate-sugar epimerases | 99.69 | |
| PLN02730 | 303 | enoyl-[acyl-carrier-protein] reductase | 99.69 | |
| PRK08261 | 450 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.68 | |
| PRK09009 | 235 | C factor cell-cell signaling protein; Provisional | 99.65 | |
| KOG3019 | 315 | consensus Predicted nucleoside-diphosphate sugar e | 99.63 | |
| COG1028 | 251 | FabG Dehydrogenases with different specificities ( | 99.63 | |
| COG3967 | 245 | DltE Short-chain dehydrogenase involved in D-alani | 99.62 | |
| KOG1611 | 249 | consensus Predicted short chain-type dehydrogenase | 99.61 | |
| KOG1200 | 256 | consensus Mitochondrial/plastidial beta-ketoacyl-A | 99.61 | |
| KOG1209 | 289 | consensus 1-Acyl dihydroxyacetone phosphate reduct | 99.61 | |
| PRK12428 | 241 | 3-alpha-hydroxysteroid dehydrogenase; Provisional | 99.57 | |
| KOG1610 | 322 | consensus Corticosteroid 11-beta-dehydrogenase and | 99.56 | |
| KOG1207 | 245 | consensus Diacetyl reductase/L-xylulose reductase | 99.56 | |
| PRK06300 | 299 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.54 | |
| PF08659 | 181 | KR: KR domain; InterPro: IPR013968 This domain is | 99.54 | |
| PF13561 | 241 | adh_short_C2: Enoyl-(Acyl carrier protein) reducta | 99.54 | |
| TIGR02813 | 2582 | omega_3_PfaA polyketide-type polyunsaturated fatty | 99.53 | |
| KOG4169 | 261 | consensus 15-hydroxyprostaglandin dehydrogenase an | 99.53 | |
| COG2910 | 211 | Putative NADH-flavin reductase [General function p | 99.5 | |
| KOG1210 | 331 | consensus Predicted 3-ketosphinganine reductase [S | 99.49 | |
| KOG4039 | 238 | consensus Serine/threonine kinase TIP30/CC3 [Signa | 99.48 | |
| KOG1014 | 312 | consensus 17 beta-hydroxysteroid dehydrogenase typ | 99.48 | |
| KOG1204 | 253 | consensus Predicted dehydrogenase [Secondary metab | 99.38 | |
| PRK06720 | 169 | hypothetical protein; Provisional | 99.33 | |
| KOG1203 | 411 | consensus Predicted dehydrogenase [Carbohydrate tr | 99.3 | |
| KOG1199 | 260 | consensus Short-chain alcohol dehydrogenase/3-hydr | 99.28 | |
| PF13950 | 62 | Epimerase_Csub: UDP-glucose 4-epimerase C-term sub | 99.25 | |
| PTZ00325 | 321 | malate dehydrogenase; Provisional | 99.22 | |
| KOG4288 | 283 | consensus Predicted oxidoreductase [General functi | 99.22 | |
| KOG1478 | 341 | consensus 3-keto sterol reductase [Lipid transport | 99.18 | |
| PLN00106 | 323 | malate dehydrogenase | 99.15 | |
| PRK08309 | 177 | short chain dehydrogenase; Provisional | 99.13 | |
| PRK13656 | 398 | trans-2-enoyl-CoA reductase; Provisional | 98.89 | |
| COG1748 | 389 | LYS9 Saccharopine dehydrogenase and related protei | 98.86 | |
| PRK09620 | 229 | hypothetical protein; Provisional | 98.82 | |
| cd01336 | 325 | MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli | 98.68 | |
| cd01338 | 322 | MDH_choloroplast_like Chloroplast-like malate dehy | 98.62 | |
| COG0623 | 259 | FabI Enoyl-[acyl-carrier-protein] | 98.56 | |
| TIGR00715 | 256 | precor6x_red precorrin-6x reductase. This enzyme w | 98.54 | |
| PRK06732 | 229 | phosphopantothenate--cysteine ligase; Validated | 98.53 | |
| cd01078 | 194 | NAD_bind_H4MPT_DH NADP binding domain of methylene | 98.5 | |
| KOG2733 | 423 | consensus Uncharacterized membrane protein [Functi | 98.47 | |
| PF03435 | 386 | Saccharop_dh: Saccharopine dehydrogenase ; InterPr | 98.47 | |
| PRK05579 | 399 | bifunctional phosphopantothenoylcysteine decarboxy | 98.42 | |
| PRK05086 | 312 | malate dehydrogenase; Provisional | 98.38 | |
| cd00704 | 323 | MDH Malate dehydrogenase. Malate dehydrogenase (MD | 98.28 | |
| TIGR02114 | 227 | coaB_strep phosphopantothenate--cysteine ligase, s | 98.21 | |
| PRK12548 | 289 | shikimate 5-dehydrogenase; Provisional | 98.19 | |
| TIGR01758 | 324 | MDH_euk_cyt malate dehydrogenase, NAD-dependent. T | 98.18 | |
| PRK14982 | 340 | acyl-ACP reductase; Provisional | 98.12 | |
| PF00056 | 141 | Ldh_1_N: lactate/malate dehydrogenase, NAD binding | 98.11 | |
| TIGR00521 | 390 | coaBC_dfp phosphopantothenoylcysteine decarboxylas | 98.08 | |
| PRK07688 | 339 | thiamine/molybdopterin biosynthesis ThiF/MoeB-like | 98.01 | |
| PRK12475 | 338 | thiamine/molybdopterin biosynthesis MoeB-like prot | 98.0 | |
| KOG4022 | 236 | consensus Dihydropteridine reductase DHPR/QDPR [Am | 97.9 | |
| PRK14106 | 450 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 97.88 | |
| COG0569 | 225 | TrkA K+ transport systems, NAD-binding component [ | 97.78 | |
| TIGR02356 | 202 | adenyl_thiF thiazole biosynthesis adenylyltransfer | 97.78 | |
| PLN02819 | 1042 | lysine-ketoglutarate reductase/saccharopine dehydr | 97.73 | |
| PF04127 | 185 | DFP: DNA / pantothenate metabolism flavoprotein; I | 97.69 | |
| COG3268 | 382 | Uncharacterized conserved protein [Function unknow | 97.68 | |
| cd05291 | 306 | HicDH_like L-2-hydroxyisocapronate dehydrogenases | 97.68 | |
| PF01488 | 135 | Shikimate_DH: Shikimate / quinate 5-dehydrogenase; | 97.64 | |
| TIGR01759 | 323 | MalateDH-SF1 malate dehydrogenase. This model repr | 97.64 | |
| cd05294 | 309 | LDH-like_MDH_nadp A lactate dehydrogenases-like st | 97.64 | |
| PRK00066 | 315 | ldh L-lactate dehydrogenase; Reviewed | 97.63 | |
| PRK05442 | 326 | malate dehydrogenase; Provisional | 97.61 | |
| cd00757 | 228 | ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1 | 97.6 | |
| PTZ00082 | 321 | L-lactate dehydrogenase; Provisional | 97.54 | |
| PLN02968 | 381 | Probable N-acetyl-gamma-glutamyl-phosphate reducta | 97.52 | |
| PF00899 | 135 | ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a | 97.51 | |
| cd01337 | 310 | MDH_glyoxysomal_mitochondrial Glyoxysomal and mito | 97.51 | |
| cd05290 | 307 | LDH_3 A subgroup of L-lactate dehydrogenases. L-la | 97.49 | |
| PTZ00117 | 319 | malate dehydrogenase; Provisional | 97.47 | |
| PF01118 | 121 | Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi | 97.44 | |
| COG0039 | 313 | Mdh Malate/lactate dehydrogenases [Energy producti | 97.44 | |
| PRK05671 | 336 | aspartate-semialdehyde dehydrogenase; Reviewed | 97.43 | |
| PRK08762 | 376 | molybdopterin biosynthesis protein MoeB; Validated | 97.41 | |
| KOG1202 | 2376 | consensus Animal-type fatty acid synthase and rela | 97.41 | |
| cd00650 | 263 | LDH_MDH_like NAD-dependent, lactate dehydrogenase- | 97.39 | |
| COG4982 | 866 | 3-oxoacyl-[acyl-carrier protein] | 97.39 | |
| PRK14874 | 334 | aspartate-semialdehyde dehydrogenase; Provisional | 97.39 | |
| PRK05597 | 355 | molybdopterin biosynthesis protein MoeB; Validated | 97.36 | |
| PLN00112 | 444 | malate dehydrogenase (NADP); Provisional | 97.33 | |
| PRK06129 | 308 | 3-hydroxyacyl-CoA dehydrogenase; Validated | 97.33 | |
| PRK00436 | 343 | argC N-acetyl-gamma-glutamyl-phosphate reductase; | 97.3 | |
| PRK08328 | 231 | hypothetical protein; Provisional | 97.3 | |
| PRK06849 | 389 | hypothetical protein; Provisional | 97.29 | |
| TIGR01772 | 312 | MDH_euk_gproteo malate dehydrogenase, NAD-dependen | 97.28 | |
| PRK06223 | 307 | malate dehydrogenase; Reviewed | 97.27 | |
| PRK08644 | 212 | thiamine biosynthesis protein ThiF; Provisional | 97.27 | |
| PRK05690 | 245 | molybdopterin biosynthesis protein MoeB; Provision | 97.23 | |
| PRK02472 | 447 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 97.2 | |
| PRK09496 | 453 | trkA potassium transporter peripheral membrane com | 97.19 | |
| PRK05600 | 370 | thiamine biosynthesis protein ThiF; Validated | 97.19 | |
| cd01487 | 174 | E1_ThiF_like E1_ThiF_like. Member of superfamily o | 97.18 | |
| TIGR02355 | 240 | moeB molybdopterin synthase sulfurylase MoeB. This | 97.17 | |
| PRK08664 | 349 | aspartate-semialdehyde dehydrogenase; Reviewed | 97.15 | |
| cd05293 | 312 | LDH_1 A subgroup of L-lactate dehydrogenases. L-la | 97.15 | |
| KOG0023 | 360 | consensus Alcohol dehydrogenase, class V [Secondar | 97.14 | |
| PRK08223 | 287 | hypothetical protein; Validated | 97.13 | |
| cd01485 | 198 | E1-1_like Ubiquitin activating enzyme (E1), repeat | 97.12 | |
| cd05292 | 308 | LDH_2 A subgroup of L-lactate dehydrogenases. L-la | 97.12 | |
| COG0002 | 349 | ArgC Acetylglutamate semialdehyde dehydrogenase [A | 97.09 | |
| cd01492 | 197 | Aos1_SUMO Ubiquitin activating enzyme (E1) subunit | 97.05 | |
| PRK04148 | 134 | hypothetical protein; Provisional | 97.04 | |
| PRK09496 | 453 | trkA potassium transporter peripheral membrane com | 97.02 | |
| cd01483 | 143 | E1_enzyme_family Superfamily of activating enzymes | 97.01 | |
| cd05295 | 452 | MDH_like Malate dehydrogenase-like. These MDH-like | 97.01 | |
| TIGR02354 | 200 | thiF_fam2 thiamine biosynthesis protein ThiF, fami | 96.99 | |
| PLN02602 | 350 | lactate dehydrogenase | 96.98 | |
| COG1004 | 414 | Ugd Predicted UDP-glucose 6-dehydrogenase [Cell en | 96.93 | |
| PRK00258 | 278 | aroE shikimate 5-dehydrogenase; Reviewed | 96.9 | |
| TIGR01757 | 387 | Malate-DH_plant malate dehydrogenase, NADP-depende | 96.89 | |
| PRK08057 | 248 | cobalt-precorrin-6x reductase; Reviewed | 96.89 | |
| cd01065 | 155 | NAD_bind_Shikimate_DH NAD(P) binding domain of Shi | 96.87 | |
| PRK00048 | 257 | dihydrodipicolinate reductase; Provisional | 96.86 | |
| PF01113 | 124 | DapB_N: Dihydrodipicolinate reductase, N-terminus; | 96.84 | |
| PRK09288 | 395 | purT phosphoribosylglycinamide formyltransferase 2 | 96.84 | |
| PRK07878 | 392 | molybdopterin biosynthesis-like protein MoeZ; Vali | 96.83 | |
| cd01080 | 168 | NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of | 96.81 | |
| TIGR01763 | 305 | MalateDH_bact malate dehydrogenase, NAD-dependent. | 96.8 | |
| COG0604 | 326 | Qor NADPH:quinone reductase and related Zn-depende | 96.8 | |
| cd00755 | 231 | YgdL_like Family of activating enzymes (E1) of ubi | 96.8 | |
| TIGR01850 | 346 | argC N-acetyl-gamma-glutamyl-phosphate reductase, | 96.77 | |
| PRK08293 | 287 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 96.77 | |
| PF02254 | 116 | TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg | 96.72 | |
| KOG1198 | 347 | consensus Zinc-binding oxidoreductase [Energy prod | 96.72 | |
| PF03446 | 163 | NAD_binding_2: NAD binding domain of 6-phosphogluc | 96.72 | |
| COG0027 | 394 | PurT Formate-dependent phosphoribosylglycinamide f | 96.69 | |
| TIGR02853 | 287 | spore_dpaA dipicolinic acid synthetase, A subunit. | 96.69 | |
| PRK06019 | 372 | phosphoribosylaminoimidazole carboxylase ATPase su | 96.67 | |
| TIGR00507 | 270 | aroE shikimate 5-dehydrogenase. This model finds p | 96.65 | |
| PRK06130 | 311 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 96.64 | |
| cd00300 | 300 | LDH_like L-lactate dehydrogenase-like enzymes. Mem | 96.63 | |
| TIGR01296 | 339 | asd_B aspartate-semialdehyde dehydrogenase (peptid | 96.63 | |
| cd08293 | 345 | PTGR2 Prostaglandin reductase. Prostaglandins and | 96.63 | |
| PRK14192 | 283 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 96.61 | |
| cd01489 | 312 | Uba2_SUMO Ubiquitin activating enzyme (E1) subunit | 96.61 | |
| PRK13982 | 475 | bifunctional SbtC-like/phosphopantothenoylcysteine | 96.6 | |
| cd08295 | 338 | double_bond_reductase_like Arabidopsis alkenal dou | 96.6 | |
| PRK15116 | 268 | sulfur acceptor protein CsdL; Provisional | 96.59 | |
| COG1064 | 339 | AdhP Zn-dependent alcohol dehydrogenases [General | 96.59 | |
| COG1179 | 263 | Dinucleotide-utilizing enzymes involved in molybdo | 96.58 | |
| cd08253 | 325 | zeta_crystallin Zeta-crystallin with NADP-dependen | 96.58 | |
| PRK07877 | 722 | hypothetical protein; Provisional | 96.56 | |
| cd01484 | 234 | E1-2_like Ubiquitin activating enzyme (E1), repeat | 96.56 | |
| PRK07530 | 292 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 96.56 | |
| KOG1494 | 345 | consensus NAD-dependent malate dehydrogenase [Ener | 96.56 | |
| PRK12549 | 284 | shikimate 5-dehydrogenase; Reviewed | 96.56 | |
| PRK07819 | 286 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 96.52 | |
| PRK07411 | 390 | hypothetical protein; Validated | 96.52 | |
| PRK08306 | 296 | dipicolinate synthase subunit A; Reviewed | 96.51 | |
| TIGR02825 | 325 | B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15 | 96.49 | |
| PRK07066 | 321 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 96.48 | |
| TIGR00518 | 370 | alaDH alanine dehydrogenase. The family of known L | 96.47 | |
| cd08259 | 332 | Zn_ADH5 Alcohol dehydrogenases of the MDR family. | 96.45 | |
| TIGR01470 | 205 | cysG_Nterm siroheme synthase, N-terminal domain. T | 96.4 | |
| TIGR01915 | 219 | npdG NADPH-dependent F420 reductase. This model re | 96.37 | |
| PRK09260 | 288 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 96.35 | |
| PF03721 | 185 | UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogen | 96.33 | |
| COG2130 | 340 | Putative NADP-dependent oxidoreductases [General f | 96.32 | |
| cd01339 | 300 | LDH-like_MDH L-lactate dehydrogenase-like malate d | 96.31 | |
| PRK14175 | 286 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 96.31 | |
| PRK11064 | 415 | wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Pro | 96.31 | |
| cd08266 | 342 | Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam | 96.27 | |
| PRK12749 | 288 | quinate/shikimate dehydrogenase; Reviewed | 96.27 | |
| PF02571 | 249 | CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: | 96.26 | |
| TIGR01142 | 380 | purT phosphoribosylglycinamide formyltransferase 2 | 96.26 | |
| PF00670 | 162 | AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase | 96.26 | |
| PRK08040 | 336 | putative semialdehyde dehydrogenase; Provisional | 96.24 | |
| TIGR01809 | 282 | Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO | 96.21 | |
| PRK07531 | 495 | bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioe | 96.19 | |
| PRK14027 | 283 | quinate/shikimate dehydrogenase; Provisional | 96.17 | |
| KOG0172 | 445 | consensus Lysine-ketoglutarate reductase/saccharop | 96.15 | |
| PLN02383 | 344 | aspartate semialdehyde dehydrogenase | 96.15 | |
| PRK14851 | 679 | hypothetical protein; Provisional | 96.14 | |
| PRK11199 | 374 | tyrA bifunctional chorismate mutase/prephenate deh | 96.13 | |
| TIGR01771 | 299 | L-LDH-NAD L-lactate dehydrogenase. This model repr | 96.12 | |
| PRK14852 | 989 | hypothetical protein; Provisional | 96.12 | |
| PLN03154 | 348 | putative allyl alcohol dehydrogenase; Provisional | 96.1 | |
| COG0169 | 283 | AroE Shikimate 5-dehydrogenase [Amino acid transpo | 96.09 | |
| cd01075 | 200 | NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l | 96.07 | |
| cd01491 | 286 | Ube1_repeat1 Ubiquitin activating enzyme (E1), rep | 96.04 | |
| PRK05476 | 425 | S-adenosyl-L-homocysteine hydrolase; Provisional | 96.03 | |
| COG0026 | 375 | PurK Phosphoribosylaminoimidazole carboxylase (NCA | 96.02 | |
| COG2085 | 211 | Predicted dinucleotide-binding enzymes [General fu | 95.98 | |
| PF02882 | 160 | THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl | 95.97 | |
| PF10727 | 127 | Rossmann-like: Rossmann-like domain; InterPro: IPR | 95.91 | |
| PF02826 | 178 | 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy | 95.85 | |
| PRK13940 | 414 | glutamyl-tRNA reductase; Provisional | 95.84 | |
| PRK01438 | 480 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 95.84 | |
| PLN02545 | 295 | 3-hydroxybutyryl-CoA dehydrogenase | 95.83 | |
| PRK03659 | 601 | glutathione-regulated potassium-efflux system prot | 95.79 | |
| cd05188 | 271 | MDR Medium chain reductase/dehydrogenase (MDR)/zin | 95.78 | |
| PLN02494 | 477 | adenosylhomocysteinase | 95.78 | |
| PRK08655 | 437 | prephenate dehydrogenase; Provisional | 95.77 | |
| PRK06718 | 202 | precorrin-2 dehydrogenase; Reviewed | 95.74 | |
| TIGR00978 | 341 | asd_EA aspartate-semialdehyde dehydrogenase (non-p | 95.73 | |
| PF00070 | 80 | Pyr_redox: Pyridine nucleotide-disulphide oxidored | 95.72 | |
| PRK00045 | 423 | hemA glutamyl-tRNA reductase; Reviewed | 95.72 | |
| PRK08261 | 450 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 95.71 | |
| cd00401 | 413 | AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado | 95.7 | |
| cd08289 | 326 | MDR_yhfp_like Yhfp putative quinone oxidoreductase | 95.69 | |
| TIGR03366 | 280 | HpnZ_proposed putative phosphonate catabolism asso | 95.67 | |
| cd08294 | 329 | leukotriene_B4_DH_like 13-PGR is a bifunctional en | 95.67 | |
| cd05213 | 311 | NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain | 95.65 | |
| TIGR01035 | 417 | hemA glutamyl-tRNA reductase. This enzyme, togethe | 95.64 | |
| COG0136 | 334 | Asd Aspartate-semialdehyde dehydrogenase [Amino ac | 95.63 | |
| PTZ00075 | 476 | Adenosylhomocysteinase; Provisional | 95.6 | |
| cd08239 | 339 | THR_DH_like L-threonine dehydrogenase (TDH)-like. | 95.59 | |
| KOG1196 | 343 | consensus Predicted NAD-dependent oxidoreductase [ | 95.59 | |
| cd01490 | 435 | Ube1_repeat2 Ubiquitin activating enzyme (E1), rep | 95.59 | |
| cd08292 | 324 | ETR_like_2 2-enoyl thioester reductase (ETR) like | 95.55 | |
| PRK00094 | 325 | gpsA NAD(P)H-dependent glycerol-3-phosphate dehydr | 95.55 | |
| PRK10669 | 558 | putative cation:proton antiport protein; Provision | 95.54 | |
| COG0289 | 266 | DapB Dihydrodipicolinate reductase [Amino acid tra | 95.5 | |
| cd05280 | 325 | MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone | 95.49 | |
| cd05276 | 323 | p53_inducible_oxidoreductase PIG3 p53-inducible qu | 95.49 | |
| PF08643 | 299 | DUF1776: Fungal family of unknown function (DUF177 | 95.44 | |
| cd01488 | 291 | Uba3_RUB Ubiquitin activating enzyme (E1) subunit | 95.44 | |
| cd08244 | 324 | MDR_enoyl_red Possible enoyl reductase. Member ide | 95.43 | |
| PRK12767 | 326 | carbamoyl phosphate synthase-like protein; Provisi | 95.42 | |
| PRK06153 | 393 | hypothetical protein; Provisional | 95.4 | |
| TIGR00936 | 406 | ahcY adenosylhomocysteinase. This enzyme hydrolyze | 95.4 | |
| cd08250 | 329 | Mgc45594_like Mgc45594 gene product and other MDR | 95.38 | |
| PRK09880 | 343 | L-idonate 5-dehydrogenase; Provisional | 95.38 | |
| PF02737 | 180 | 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind | 95.36 | |
| PRK06598 | 369 | aspartate-semialdehyde dehydrogenase; Reviewed | 95.35 | |
| PRK10792 | 285 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 95.32 | |
| PRK04308 | 445 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 95.3 |
| >COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-61 Score=406.65 Aligned_cols=314 Identities=44% Similarity=0.821 Sum_probs=295.7
Q ss_pred CeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCCCE
Q 019795 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKFEA 84 (335)
Q Consensus 5 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~d~ 84 (335)
|+||||||.||||+|.+.+|++.|++|++++.-.....+.... ..+.++++|+.|.+.++++|.+.++|+
T Consensus 1 ~~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~----------~~~~f~~gDi~D~~~L~~vf~~~~ida 70 (329)
T COG1087 1 MKVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLK----------LQFKFYEGDLLDRALLTAVFEENKIDA 70 (329)
T ss_pred CeEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhh----------ccCceEEeccccHHHHHHHHHhcCCCE
Confidence 5899999999999999999999999999999877665554432 126899999999999999999999999
Q ss_pred EEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccCCCCCCCccCCCCCCCCChhHHhHHHHH
Q 019795 85 VIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQWCE 164 (335)
Q Consensus 85 vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~Y~~sK~~~E 164 (335)
|||+||...+.++.++|.++++.|+.||.+|+++|++.++++|||-||+++||.+...|++|+.|..|.++||.||++.|
T Consensus 71 ViHFAa~~~VgESv~~Pl~Yy~NNv~gTl~Ll~am~~~gv~~~vFSStAavYG~p~~~PI~E~~~~~p~NPYG~sKlm~E 150 (329)
T COG1087 71 VVHFAASISVGESVQNPLKYYDNNVVGTLNLIEAMLQTGVKKFIFSSTAAVYGEPTTSPISETSPLAPINPYGRSKLMSE 150 (329)
T ss_pred EEECccccccchhhhCHHHHHhhchHhHHHHHHHHHHhCCCEEEEecchhhcCCCCCcccCCCCCCCCCCcchhHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhCCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHHHhCCCCceeEecccCCCCCCceeeeeeeHh
Q 019795 165 EIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAVRDYIHVM 244 (335)
Q Consensus 165 ~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~v~~~ 244 (335)
++++.+++.+ +++.++||.+|+-|.++.+.+|+...+. ..++|.+..++.|+.+.+.++|++++.+||..+||||||.
T Consensus 151 ~iL~d~~~a~-~~~~v~LRYFN~aGA~~~G~iGe~~~~~-thLip~~~q~A~G~r~~l~ifG~DY~T~DGT~iRDYIHV~ 228 (329)
T COG1087 151 EILRDAAKAN-PFKVVILRYFNVAGACPDGTLGQRYPGA-TLLIPVAAEAALGKRDKLFIFGDDYDTKDGTCIRDYIHVD 228 (329)
T ss_pred HHHHHHHHhC-CCcEEEEEecccccCCCCCccCCCCCCc-chHHHHHHHHHhcCCceeEEeCCCCCCCCCCeeeeeeehh
Confidence 9999999998 7999999999999999999999998886 8899999999999999899999999999999999999999
Q ss_pred hhhc-------------cCceEEecCCccccHHHHHHHHHHHhCCCCCceeCCCCCCccceeeccHHHHHHhcCCcccc-
Q 019795 245 DLAD-------------GCIAYNLGNGKGISVLEMVAAFEKASGKKIPIKFCPRRVGDATAVYAATDKAHKELGWKPKY- 310 (335)
Q Consensus 245 D~~~-------------~~~~~nv~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~d~~k~~~~Lg~~p~~- 310 (335)
|+|+ ..++||+++|...|+.|+++.+.++.|++++....+++++++..++.|++|+++.|||+|++
T Consensus 229 DLA~aH~~Al~~L~~~g~~~~~NLG~G~G~SV~evi~a~~~vtg~~ip~~~~~RR~GDpa~l~Ad~~kA~~~Lgw~p~~~ 308 (329)
T COG1087 229 DLADAHVLALKYLKEGGSNNIFNLGSGNGFSVLEVIEAAKKVTGRDIPVEIAPRRAGDPAILVADSSKARQILGWQPTYD 308 (329)
T ss_pred HHHHHHHHHHHHHHhCCceeEEEccCCCceeHHHHHHHHHHHhCCcCceeeCCCCCCCCceeEeCHHHHHHHhCCCcccC
Confidence 9997 23699999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHh-cCCCCc
Q 019795 311 GIEDMCAHQWNWAK-NNPMGY 330 (335)
Q Consensus 311 ~~~~~~~~~~~~~~-~~~~~~ 330 (335)
++++.+++++.|.. +++.+|
T Consensus 309 ~L~~ii~~aw~W~~~~~~~g~ 329 (329)
T COG1087 309 DLEDIIKDAWDWHQQRHGDGY 329 (329)
T ss_pred CHHHHHHHHHHHhhhhcCCCC
Confidence 99999999999999 666553
|
|
| >COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-54 Score=359.49 Aligned_cols=304 Identities=29% Similarity=0.474 Sum_probs=266.0
Q ss_pred CeEEEEcCCChhhHHHHHHHHhCC--CeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCC
Q 019795 5 KNILVTGGAGFIGTHCALQLLQGG--FKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKF 82 (335)
Q Consensus 5 ~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~ 82 (335)
|++|||||.||||++++++++++. .+|++++.-.- ......+.... ..++..++++||+|.+.+..++++..+
T Consensus 1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTY--Agn~~~l~~~~---~~~~~~fv~~DI~D~~~v~~~~~~~~~ 75 (340)
T COG1088 1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTY--AGNLENLADVE---DSPRYRFVQGDICDRELVDRLFKEYQP 75 (340)
T ss_pred CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccc--cCCHHHHHhhh---cCCCceEEeccccCHHHHHHHHHhcCC
Confidence 589999999999999999999985 44677765321 12222232222 236899999999999999999998889
Q ss_pred CEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCC-EEEEeccccccCCCCC--CCccCCCCCCCCChhHHh
Q 019795 83 EAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCK-KLVFSSSATIYGQPEK--IPCVEDFPYGAMNPYGRT 159 (335)
Q Consensus 83 d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~-~~v~~Ss~~vyg~~~~--~~~~e~~~~~~~~~Y~~s 159 (335)
|+|+|+|+-.++..+...|...+++|+.||.+|++++++...+ +|+|+||..|||.... ..++|++|+.|.++|+.|
T Consensus 76 D~VvhfAAESHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~frf~HISTDEVYG~l~~~~~~FtE~tp~~PsSPYSAS 155 (340)
T COG1088 76 DAVVHFAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKYWGKFRFHHISTDEVYGDLGLDDDAFTETTPYNPSSPYSAS 155 (340)
T ss_pred CeEEEechhccccccccChhhhhhcchHHHHHHHHHHHHhcccceEEEeccccccccccCCCCCcccCCCCCCCCCcchh
Confidence 9999999999999999999999999999999999999998654 9999999999998754 379999999999999999
Q ss_pred HHHHHHHHHHHHhhCCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHHHhCCCCceeEecccCCCCCCceeee
Q 019795 160 KQWCEEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAVRD 239 (335)
Q Consensus 160 K~~~E~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 239 (335)
|+.+..+++++.+.+ |+++++.|++|-|||... +..++|.+...+..+.+ ++++| +|.+.||
T Consensus 156 KAasD~lVray~~TY-glp~~ItrcSNNYGPyqf----------pEKlIP~~I~nal~g~~-lpvYG------dG~~iRD 217 (340)
T COG1088 156 KAASDLLVRAYVRTY-GLPATITRCSNNYGPYQF----------PEKLIPLMIINALLGKP-LPVYG------DGLQIRD 217 (340)
T ss_pred hhhHHHHHHHHHHHc-CCceEEecCCCCcCCCcC----------chhhhHHHHHHHHcCCC-Cceec------CCcceee
Confidence 999999999999999 999999999999999644 66688865544444445 79999 9999999
Q ss_pred eeeHhhhhc----------cCceEEecCCccccHHHHHHHHHHHhCCCCC-----ceeCCCCCCccceeeccHHHHHHhc
Q 019795 240 YIHVMDLAD----------GCIAYNLGNGKGISVLEMVAAFEKASGKKIP-----IKFCPRRVGDATAVYAATDKAHKEL 304 (335)
Q Consensus 240 ~v~~~D~~~----------~~~~~nv~~~~~~s~~el~~~i~~~~g~~~~-----~~~~~~~~~~~~~~~~d~~k~~~~L 304 (335)
|+||+|-|+ .|++|||+++...+-.|+++.|++.++...+ +.++..+++--.+..+|.+|++++|
T Consensus 218 Wl~VeDh~~ai~~Vl~kg~~GE~YNIgg~~E~~Nlevv~~i~~~l~~~~~~~~~li~~V~DRpGHD~RYaid~~Ki~~eL 297 (340)
T COG1088 218 WLYVEDHCRAIDLVLTKGKIGETYNIGGGNERTNLEVVKTICELLGKDKPDYRDLITFVEDRPGHDRRYAIDASKIKREL 297 (340)
T ss_pred eEEeHhHHHHHHHHHhcCcCCceEEeCCCccchHHHHHHHHHHHhCccccchhhheEeccCCCCCccceeechHHHhhhc
Confidence 999999987 5999999999999999999999999998877 7788888888889999999999999
Q ss_pred CCccccCHHHHHHHHHHHHhcCCCCcc
Q 019795 305 GWKPKYGIEDMCAHQWNWAKNNPMGYQ 331 (335)
Q Consensus 305 g~~p~~~~~~~~~~~~~~~~~~~~~~~ 331 (335)
||.|+++|+++|+++++|+.+|..-|.
T Consensus 298 gW~P~~~fe~GlrkTv~WY~~N~~Ww~ 324 (340)
T COG1088 298 GWRPQETFETGLRKTVDWYLDNEWWWE 324 (340)
T ss_pred CCCcCCCHHHHHHHHHHHHHhchHHHh
Confidence 999999999999999999999887664
|
|
| >KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-52 Score=352.06 Aligned_cols=328 Identities=56% Similarity=0.949 Sum_probs=308.6
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCC
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKF 82 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~ 82 (335)
+.++||||||.||||+|.+.+|+++|+.|++++...........++..+... .+++.++++|++|.+.++++|+...+
T Consensus 1 ~~~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~~--~~~v~f~~~Dl~D~~~L~kvF~~~~f 78 (343)
T KOG1371|consen 1 GGKHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLLGE--GKSVFFVEGDLNDAEALEKLFSEVKF 78 (343)
T ss_pred CCcEEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhcCC--CCceEEEEeccCCHHHHHHHHhhcCC
Confidence 3579999999999999999999999999999998887777777777665543 37899999999999999999999999
Q ss_pred CEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccCCCCCCCccCCCCCC-CCChhHHhHH
Q 019795 83 EAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQPEKIPCVEDFPYG-AMNPYGRTKQ 161 (335)
Q Consensus 83 d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~-~~~~Y~~sK~ 161 (335)
|.|+|+|+...+..+.++|..+++.|+.|+.++++.|++.+++.+|+.||+.+||.+...|++|+++.. |.++|+.+|.
T Consensus 79 d~V~Hfa~~~~vgeS~~~p~~Y~~nNi~gtlnlLe~~~~~~~~~~V~sssatvYG~p~~ip~te~~~t~~p~~pyg~tK~ 158 (343)
T KOG1371|consen 79 DAVMHFAALAAVGESMENPLSYYHNNIAGTLNLLEVMKAHNVKALVFSSSATVYGLPTKVPITEEDPTDQPTNPYGKTKK 158 (343)
T ss_pred ceEEeehhhhccchhhhCchhheehhhhhHHHHHHHHHHcCCceEEEecceeeecCcceeeccCcCCCCCCCCcchhhhH
Confidence 999999999999999999999999999999999999999999999999999999999999999999998 9999999999
Q ss_pred HHHHHHHHHHhhCCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHHHhCCCCceeEecccCCCCCCceeeeee
Q 019795 162 WCEEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAVRDYI 241 (335)
Q Consensus 162 ~~E~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~v 241 (335)
..|++...+.... .+.++.||.++++|.++.+.+|+.+.+.+.++.|.+..++.++.+.+.+.|.++..-||+..|+++
T Consensus 159 ~iE~i~~d~~~~~-~~~~~~LRyfn~~ga~p~Gr~ge~p~~~~nnl~p~v~~vaigr~~~l~v~g~d~~t~dgt~vrdyi 237 (343)
T KOG1371|consen 159 AIEEIIHDYNKAY-GWKVTGLRYFNVIGAHPSGRIGEAPLGIPNNLLPYVFQVAIGRRPNLQVVGRDYTTIDGTIVRDYI 237 (343)
T ss_pred HHHHHHHhhhccc-cceEEEEEeccccCccccCccCCCCccCcccccccccchhhcccccceeecCcccccCCCeeecce
Confidence 9999999999888 699999999999999999999999999999999999999999999899999999999999999999
Q ss_pred eHhhhhc-------------cCceEEecCCccccHHHHHHHHHHHhCCCCCceeCCCCCCccceeeccHHHHHHhcCCcc
Q 019795 242 HVMDLAD-------------GCIAYNLGNGKGISVLEMVAAFEKASGKKIPIKFCPRRVGDATAVYAATDKAHKELGWKP 308 (335)
Q Consensus 242 ~~~D~~~-------------~~~~~nv~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~d~~k~~~~Lg~~p 308 (335)
|+-|.++ ..++||++++...|+.++++.+.++.|.++++...+.+..+......+++++.++|||+|
T Consensus 238 ~v~Dla~~h~~al~k~~~~~~~~i~Nlgtg~g~~V~~lv~a~~k~~g~~~k~~~v~~R~gdv~~~ya~~~~a~~elgwk~ 317 (343)
T KOG1371|consen 238 HVLDLADGHVAALGKLRGAAEFGVYNLGTGKGSSVLELVTAFEKALGVKIKKKVVPRRNGDVAFVYANPSKAQRELGWKA 317 (343)
T ss_pred eeEehHHHHHHHhhccccchheeeEeecCCCCccHHHHHHHHHHHhcCCCCccccCCCCCCceeeeeChHHHHHHhCCcc
Confidence 9999987 345999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCHHHHHHHHHHHHhcCCCCcccC
Q 019795 309 KYGIEDMCAHQWNWAKNNPMGYQTK 333 (335)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (335)
+++++++++++++|..+++.+|..+
T Consensus 318 ~~~iee~c~dlw~W~~~np~gy~~~ 342 (343)
T KOG1371|consen 318 KYGLQEMLKDLWRWQKQNPSGYDTK 342 (343)
T ss_pred ccCHHHHHHHHHHHHhcCCCcCCCC
Confidence 9999999999999999999998754
|
|
| >PLN02240 UDP-glucose 4-epimerase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-50 Score=367.76 Aligned_cols=333 Identities=69% Similarity=1.189 Sum_probs=279.0
Q ss_pred CCCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcC
Q 019795 1 MASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQ 80 (335)
Q Consensus 1 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~ 80 (335)
||++|+|+|||||||||++|++.|+++|++|++++|..........++.+... ....++.++.+|++|++++.++++..
T Consensus 2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~l~~~~~~~ 80 (352)
T PLN02240 2 SLMGRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAG-DLGDNLVFHKVDLRDKEALEKVFAST 80 (352)
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHhhc-ccCccceEEecCcCCHHHHHHHHHhC
Confidence 56779999999999999999999999999999998765433322222222211 01246889999999999999998866
Q ss_pred CCCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccCCCCCCCccCCCCCCCCChhHHhH
Q 019795 81 KFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTK 160 (335)
Q Consensus 81 ~~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~Y~~sK 160 (335)
++|+|||+|+..........+...+++|+.++.+++++|++.+++++|++||+++||.....+++|+.+..|.+.|+.+|
T Consensus 81 ~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~E~~~~~~~~~Y~~sK 160 (352)
T PLN02240 81 RFDAVIHFAGLKAVGESVAKPLLYYDNNLVGTINLLEVMAKHGCKKLVFSSSATVYGQPEEVPCTEEFPLSATNPYGRTK 160 (352)
T ss_pred CCCEEEEccccCCccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccHHHhCCCCCCCCCCCCCCCCCCHHHHHH
Confidence 89999999997544344567778999999999999999999888999999999999877677899999999999999999
Q ss_pred HHHHHHHHHHHhhCCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHHHhCCCCceeEecccCCCCCCceeeee
Q 019795 161 QWCEEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAVRDY 240 (335)
Q Consensus 161 ~~~E~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 240 (335)
..+|++++.+.....+++++++|++++||+++...+|+.....+..+.+++..+..++.+.+.++|+..+.++|.+.++|
T Consensus 161 ~~~e~~~~~~~~~~~~~~~~~~R~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~ 240 (352)
T PLN02240 161 LFIEEICRDIHASDPEWKIILLRYFNPVGAHPSGRIGEDPKGIPNNLMPYVQQVAVGRRPELTVFGNDYPTKDGTGVRDY 240 (352)
T ss_pred HHHHHHHHHHHHhcCCCCEEEEeecCcCCCCccccccCCCCCCcchHHHHHHHHHhCCCCceEEeCCCCCCCCCCEEEee
Confidence 99999999887654378999999999999998888887665556677788888887766557778755555578999999
Q ss_pred eeHhhhhc---------------cCceEEecCCccccHHHHHHHHHHHhCCCCCceeCCCCCCccceeeccHHHHHHhcC
Q 019795 241 IHVMDLAD---------------GCIAYNLGNGKGISVLEMVAAFEKASGKKIPIKFCPRRVGDATAVYAATDKAHKELG 305 (335)
Q Consensus 241 v~~~D~~~---------------~~~~~nv~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~d~~k~~~~Lg 305 (335)
+|++|+++ .+++||+++++.+|++|+++.+.+.+|.+.++...+.++.+......|++|+++.||
T Consensus 241 i~v~D~a~a~~~a~~~~~~~~~~~~~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg 320 (352)
T PLN02240 241 IHVMDLADGHIAALRKLFTDPDIGCEAYNLGTGKGTSVLEMVAAFEKASGKKIPLKLAPRRPGDAEEVYASTEKAEKELG 320 (352)
T ss_pred EEHHHHHHHHHHHHhhhhhccCCCCceEEccCCCcEeHHHHHHHHHHHhCCCCCceeCCCCCCChhhhhcCHHHHHHHhC
Confidence 99999985 147999999999999999999999999888777766666666667789999999999
Q ss_pred CccccCHHHHHHHHHHHHhcCCCCcccCC
Q 019795 306 WKPKYGIEDMCAHQWNWAKNNPMGYQTKR 334 (335)
Q Consensus 306 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (335)
|+|+++++++|+++++|+++++..||..+
T Consensus 321 ~~p~~~l~~~l~~~~~~~~~~~~~~~~~~ 349 (352)
T PLN02240 321 WKAKYGIDEMCRDQWNWASKNPYGYGSSP 349 (352)
T ss_pred CCCCCCHHHHHHHHHHHHHhCccccCCCC
Confidence 99999999999999999999999998764
|
|
| >PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-50 Score=366.91 Aligned_cols=313 Identities=25% Similarity=0.366 Sum_probs=249.3
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCC
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQK 81 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~ 81 (335)
+++|+|||||||||||++|+++|+++|++|++++|...........+....+.....++.++.+|++|.+.+.++++ +
T Consensus 13 ~~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~--~ 90 (348)
T PRK15181 13 LAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACK--N 90 (348)
T ss_pred ccCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhh--C
Confidence 46789999999999999999999999999999998654322222111110000111468899999999999999998 7
Q ss_pred CCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccCCCCCCCccCCCCCCCCChhHHhHH
Q 019795 82 FEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQ 161 (335)
Q Consensus 82 ~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~Y~~sK~ 161 (335)
+|+|||+|+......+..++..++++|+.|+.+++++|++.+++++||+||+++||.....+..|+.+..|.++|+.+|.
T Consensus 91 ~d~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~p~~~Y~~sK~ 170 (348)
T PRK15181 91 VDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKY 170 (348)
T ss_pred CCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeechHhhCCCCCCCCCCCCCCCCCChhhHHHH
Confidence 99999999986655566778889999999999999999999999999999999999766667778888888899999999
Q ss_pred HHHHHHHHHHhhCCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHHH-HHHHhCCCCceeEecccCCCCCCceeeee
Q 019795 162 WCEEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYI-QQVAVGRHPELNVYGQDYPTKDGSAVRDY 240 (335)
Q Consensus 162 ~~E~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 240 (335)
++|.+++.+.+.+ +++++++||++||||++. +.+....+++.+ ..++.++ + +.++| +|.+.++|
T Consensus 171 ~~e~~~~~~~~~~-~~~~~~lR~~~vyGp~~~------~~~~~~~~i~~~~~~~~~~~-~-i~~~g------~g~~~rd~ 235 (348)
T PRK15181 171 VNELYADVFARSY-EFNAIGLRYFNVFGRRQN------PNGAYSAVIPRWILSLLKDE-P-IYING------DGSTSRDF 235 (348)
T ss_pred HHHHHHHHHHHHh-CCCEEEEEecceeCcCCC------CCCccccCHHHHHHHHHcCC-C-cEEeC------CCCceEee
Confidence 9999999888777 999999999999999643 111123355544 4455554 4 67788 89999999
Q ss_pred eeHhhhhc-------------cCceEEecCCccccHHHHHHHHHHHhCCC------CCceeCCCCCCccceeeccHHHHH
Q 019795 241 IHVMDLAD-------------GCIAYNLGNGKGISVLEMVAAFEKASGKK------IPIKFCPRRVGDATAVYAATDKAH 301 (335)
Q Consensus 241 v~~~D~~~-------------~~~~~nv~~~~~~s~~el~~~i~~~~g~~------~~~~~~~~~~~~~~~~~~d~~k~~ 301 (335)
+|++|+|+ .+++|||++++.+|++|+++.+.+.++.. ..+...+..+.+.....+|++|++
T Consensus 236 i~v~D~a~a~~~~~~~~~~~~~~~~yni~~g~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~ 315 (348)
T PRK15181 236 CYIENVIQANLLSATTNDLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFRDGDVKHSQADITKIK 315 (348)
T ss_pred EEHHHHHHHHHHHHhcccccCCCCEEEecCCCcEeHHHHHHHHHHHhCcccccccCCCcccCCCCCCcccccccCHHHHH
Confidence 99999987 13699999999999999999999998732 122223334455567789999999
Q ss_pred HhcCCccccCHHHHHHHHHHHHhcCCC-Ccc
Q 019795 302 KELGWKPKYGIEDMCAHQWNWAKNNPM-GYQ 331 (335)
Q Consensus 302 ~~Lg~~p~~~~~~~~~~~~~~~~~~~~-~~~ 331 (335)
+.|||+|+++++++|+++++|++.+.. .|+
T Consensus 316 ~~lGw~P~~sl~egl~~~~~w~~~~~~~~~~ 346 (348)
T PRK15181 316 TFLSYEPEFDIKEGLKQTLKWYIDKHSTLYS 346 (348)
T ss_pred HHhCCCCCCCHHHHHHHHHHHHHHhccceec
Confidence 999999999999999999999988544 443
|
|
| >PRK10675 UDP-galactose-4-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-48 Score=350.42 Aligned_cols=323 Identities=53% Similarity=0.944 Sum_probs=266.1
Q ss_pred CeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCCCE
Q 019795 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKFEA 84 (335)
Q Consensus 5 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~d~ 84 (335)
|+|||||||||||++|+++|+++|++|++++|...........+....+ .++.++.+|++|.+.+.++++..++|+
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 76 (338)
T PRK10675 1 MRVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERLGG----KHPTFVEGDIRNEALLTEILHDHAIDT 76 (338)
T ss_pred CeEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHHHHHHhcC----CCceEEEccCCCHHHHHHHHhcCCCCE
Confidence 4799999999999999999999999999998754332222222222111 356788999999999999988667999
Q ss_pred EEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccCCCCCCCccCCCCC-CCCChhHHhHHHH
Q 019795 85 VIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQPEKIPCVEDFPY-GAMNPYGRTKQWC 163 (335)
Q Consensus 85 vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~-~~~~~Y~~sK~~~ 163 (335)
|||+|+..........+...+++|+.++.+++++|++.+++++|++||+++||.....+++|+.+. .|.+.|+.+|..+
T Consensus 77 vvh~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~yg~~~~~~~~E~~~~~~p~~~Y~~sK~~~ 156 (338)
T PRK10675 77 VIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNLIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMV 156 (338)
T ss_pred EEECCccccccchhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHhhCCCCCCccccccCCCCCCChhHHHHHHH
Confidence 999998754433445566889999999999999999999999999999999997766778898886 6788999999999
Q ss_pred HHHHHHHHhhCCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHHHhCCCCceeEecccCCCCCCceeeeeeeH
Q 019795 164 EEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAVRDYIHV 243 (335)
Q Consensus 164 E~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~v~~ 243 (335)
|++++.+.++.++++++++|++++||+++...+|+.....+..+++++.+++.+..+.+.++|+..+.+++.+.++|+|+
T Consensus 157 E~~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v 236 (338)
T PRK10675 157 EQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHV 236 (338)
T ss_pred HHHHHHHHHhcCCCcEEEEEeeeecCCCcccccccCCCCChhHHHHHHHHHHhcCCCceEEeCCcCCCCCCcEEEeeEEH
Confidence 99999887665588999999999999998888887655445567777777776655446777765555678899999999
Q ss_pred hhhhc-------------cCceEEecCCccccHHHHHHHHHHHhCCCCCceeCCCCCCccceeeccHHHHHHhcCCcccc
Q 019795 244 MDLAD-------------GCIAYNLGNGKGISVLEMVAAFEKASGKKIPIKFCPRRVGDATAVYAATDKAHKELGWKPKY 310 (335)
Q Consensus 244 ~D~~~-------------~~~~~nv~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~d~~k~~~~Lg~~p~~ 310 (335)
+|+++ .+++||+++++.+|+.|+++.+.+.+|.+.++...+....+....++|++|+++.|||+|++
T Consensus 237 ~D~a~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~p~~ 316 (338)
T PRK10675 237 MDLADGHVAAMEKLANKPGVHIYNLGAGVGSSVLDVVNAFSKACGKPVNYHFAPRREGDLPAYWADASKADRELNWRVTR 316 (338)
T ss_pred HHHHHHHHHHHHhhhccCCCceEEecCCCceeHHHHHHHHHHHhCCCCCeeeCCCCCCchhhhhcCHHHHHHHhCCCCcC
Confidence 99986 14699999999999999999999999988777666655555667788999999999999999
Q ss_pred CHHHHHHHHHHHHhcCCCCcc
Q 019795 311 GIEDMCAHQWNWAKNNPMGYQ 331 (335)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~ 331 (335)
+++++|+++++|+++++.+|.
T Consensus 317 ~~~~~~~~~~~~~~~~~~~~~ 337 (338)
T PRK10675 317 TLDEMAQDTWHWQSRHPQGYP 337 (338)
T ss_pred cHHHHHHHHHHHHHhhhhccC
Confidence 999999999999999877654
|
|
| >TIGR01472 gmd GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-46 Score=339.99 Aligned_cols=307 Identities=22% Similarity=0.286 Sum_probs=241.5
Q ss_pred CeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCc-hhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCCC
Q 019795 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSV-PEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKFE 83 (335)
Q Consensus 5 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~d 83 (335)
|+|||||||||||++|+++|+++|++|++++|+.... ......+..........++.++.+|++|.+.+.++++..++|
T Consensus 1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d 80 (343)
T TIGR01472 1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEIKPT 80 (343)
T ss_pred CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhCCCC
Confidence 6899999999999999999999999999999875421 111111110000001146889999999999999999976789
Q ss_pred EEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCC---EEEEeccccccCCCCCCCccCCCCCCCCChhHHhH
Q 019795 84 AVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCK---KLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTK 160 (335)
Q Consensus 84 ~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~---~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~Y~~sK 160 (335)
+|||+|+......+...+...+++|+.|+.+++++|++.+++ ++|++||.++||.....+.+|+.+..|.++|+.||
T Consensus 81 ~ViH~Aa~~~~~~~~~~~~~~~~~n~~gt~~ll~a~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK 160 (343)
T TIGR01472 81 EIYNLAAQSHVKVSFEIPEYTADVDGIGTLRLLEAVRTLGLIKSVKFYQASTSELYGKVQEIPQNETTPFYPRSPYAAAK 160 (343)
T ss_pred EEEECCcccccchhhhChHHHHHHHHHHHHHHHHHHHHhCCCcCeeEEEeccHHhhCCCCCCCCCCCCCCCCCChhHHHH
Confidence 999999986554455566788899999999999999987753 89999999999976666788999999999999999
Q ss_pred HHHHHHHHHHHhhCCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHHHhCCCCceeEecccCCCCCCceeeee
Q 019795 161 QWCEEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAVRDY 240 (335)
Q Consensus 161 ~~~E~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 240 (335)
..+|.+++.+++++ ++++++.|+.++|||... .......+...+.++..++.. ..++| +|.+.++|
T Consensus 161 ~~~e~~~~~~~~~~-~~~~~~~~~~~~~gp~~~------~~~~~~~~~~~~~~~~~~~~~-~~~~g------~g~~~rd~ 226 (343)
T TIGR01472 161 LYAHWITVNYREAY-GLFAVNGILFNHESPRRG------ENFVTRKITRAAAKIKLGLQE-KLYLG------NLDAKRDW 226 (343)
T ss_pred HHHHHHHHHHHHHh-CCceEEEeecccCCCCCC------ccccchHHHHHHHHHHcCCCC-ceeeC------CCccccCc
Confidence 99999999988877 899999999999998532 111122233345555556543 34567 78999999
Q ss_pred eeHhhhhc---------cCceEEecCCccccHHHHHHHHHHHhCCCCCc-------------------ee--CCCCCCcc
Q 019795 241 IHVMDLAD---------GCIAYNLGNGKGISVLEMVAAFEKASGKKIPI-------------------KF--CPRRVGDA 290 (335)
Q Consensus 241 v~~~D~~~---------~~~~~nv~~~~~~s~~el~~~i~~~~g~~~~~-------------------~~--~~~~~~~~ 290 (335)
+|++|+++ .+++|||++++.+|+.|+++.+.+.+|.+... .. .+..+.+.
T Consensus 227 i~V~D~a~a~~~~~~~~~~~~yni~~g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (343)
T TIGR01472 227 GHAKDYVEAMWLMLQQDKPDDYVIATGETHSVREFVEVSFEYIGKTLNWKDKGINEVGRCKETGKVHVEIDPRYFRPTEV 306 (343)
T ss_pred eeHHHHHHHHHHHHhcCCCccEEecCCCceeHHHHHHHHHHHcCCCcccccccccccccccccCceeEEeCccccCCCcc
Confidence 99999998 24689999999999999999999999965421 11 11234455
Q ss_pred ceeeccHHHHHHhcCCccccCHHHHHHHHHHHHhc
Q 019795 291 TAVYAATDKAHKELGWKPKYGIEDMCAHQWNWAKN 325 (335)
Q Consensus 291 ~~~~~d~~k~~~~Lg~~p~~~~~~~~~~~~~~~~~ 325 (335)
.....|++|+++.|||+|+++++++|+++++|+++
T Consensus 307 ~~~~~d~~k~~~~lgw~p~~~l~egi~~~~~~~~~ 341 (343)
T TIGR01472 307 DLLLGDATKAKEKLGWKPEVSFEKLVKEMVEEDLE 341 (343)
T ss_pred chhcCCHHHHHHhhCCCCCCCHHHHHHHHHHHHHh
Confidence 66678999999999999999999999999999874
|
Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116). |
| >PLN02166 dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-46 Score=344.92 Aligned_cols=298 Identities=24% Similarity=0.442 Sum_probs=240.0
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCCC
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKFE 83 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~d 83 (335)
.|+|||||||||||++|+++|+++|++|++++|........ +..... ...++++.+|+.+.. +. ++|
T Consensus 120 ~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~~~~---~~~~~~---~~~~~~~~~Di~~~~-----~~--~~D 186 (436)
T PLN02166 120 RLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKEN---LVHLFG---NPRFELIRHDVVEPI-----LL--EVD 186 (436)
T ss_pred CCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCccHhH---hhhhcc---CCceEEEECcccccc-----cc--CCC
Confidence 47899999999999999999999999999999864322211 111111 146788899987653 33 689
Q ss_pred EEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccCCCCCCCccCCC-----CCCCCChhHH
Q 019795 84 AVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQPEKIPCVEDF-----PYGAMNPYGR 158 (335)
Q Consensus 84 ~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~-----~~~~~~~Y~~ 158 (335)
+|||+|+.........++...+++|+.++.+++++|++.++ ++|++||+++||.....+.+|+. |..|.+.|+.
T Consensus 187 ~ViHlAa~~~~~~~~~~p~~~~~~Nv~gT~nLleaa~~~g~-r~V~~SS~~VYg~~~~~p~~E~~~~~~~p~~p~s~Yg~ 265 (436)
T PLN02166 187 QIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDE 265 (436)
T ss_pred EEEECceeccchhhccCHHHHHHHHHHHHHHHHHHHHHhCC-EEEEECcHHHhCCCCCCCCCccccccCCCCCCCCchHH
Confidence 99999997544444457788999999999999999999885 89999999999977666777763 5667788999
Q ss_pred hHHHHHHHHHHHHhhCCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHH-HHHHHHhCCCCceeEecccCCCCCCcee
Q 019795 159 TKQWCEEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMP-YIQQVAVGRHPELNVYGQDYPTKDGSAV 237 (335)
Q Consensus 159 sK~~~E~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 237 (335)
+|..+|++++.+.+.+ +++++++||+++||+++... ...+++ ++.+++.+. + +.++| ++.+.
T Consensus 266 SK~~aE~~~~~y~~~~-~l~~~ilR~~~vYGp~~~~~--------~~~~i~~~i~~~l~~~-~-i~v~g------~g~~~ 328 (436)
T PLN02166 266 GKRTAETLAMDYHRGA-GVEVRIARIFNTYGPRMCLD--------DGRVVSNFVAQTIRKQ-P-MTVYG------DGKQT 328 (436)
T ss_pred HHHHHHHHHHHHHHHh-CCCeEEEEEccccCCCCCCC--------ccchHHHHHHHHhcCC-C-cEEeC------CCCeE
Confidence 9999999999998877 99999999999999964311 122444 455555554 4 67788 78899
Q ss_pred eeeeeHhhhhc---------cCceEEecCCccccHHHHHHHHHHHhCCCCCceeCCCCCCccceeeccHHHHHHhcCCcc
Q 019795 238 RDYIHVMDLAD---------GCIAYNLGNGKGISVLEMVAAFEKASGKKIPIKFCPRRVGDATAVYAATDKAHKELGWKP 308 (335)
Q Consensus 238 ~~~v~~~D~~~---------~~~~~nv~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~d~~k~~~~Lg~~p 308 (335)
++|+|++|+++ ..++||+++++.+|+.|+++.|.+.+|.+..+.+.+....+.....+|++|+++.|||+|
T Consensus 329 rdfi~V~Dva~ai~~~~~~~~~giyNIgs~~~~Si~ela~~I~~~~g~~~~i~~~p~~~~~~~~~~~d~~Ka~~~LGw~P 408 (436)
T PLN02166 329 RSFQYVSDLVDGLVALMEGEHVGPFNLGNPGEFTMLELAEVVKETIDSSATIEFKPNTADDPHKRKPDISKAKELLNWEP 408 (436)
T ss_pred EeeEEHHHHHHHHHHHHhcCCCceEEeCCCCcEeHHHHHHHHHHHhCCCCCeeeCCCCCCCccccccCHHHHHHHcCCCC
Confidence 99999999997 357999999999999999999999999877776666655566677899999999999999
Q ss_pred ccCHHHHHHHHHHHHhcCCCCccc
Q 019795 309 KYGIEDMCAHQWNWAKNNPMGYQT 332 (335)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~ 332 (335)
+++++++++++++|++++-++-.+
T Consensus 409 ~~sl~egl~~~i~~~~~~~~~~~~ 432 (436)
T PLN02166 409 KISLREGLPLMVSDFRNRILNEDE 432 (436)
T ss_pred CCCHHHHHHHHHHHHHHHhcCccc
Confidence 999999999999999987665543
|
|
| >PRK10217 dTDP-glucose 4,6-dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-46 Score=338.72 Aligned_cols=301 Identities=25% Similarity=0.447 Sum_probs=237.2
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhCCCeEEE-EecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCC
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQGGFKVVL-IDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKF 82 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~-~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~ 82 (335)
||+|||||||||||++|++.|+++|+++++ +++.... .. ...+.... ....+.++.+|++|.+++.++++..++
T Consensus 1 ~~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~-~~-~~~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 75 (355)
T PRK10217 1 MRKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYA-GN-LMSLAPVA---QSERFAFEKVDICDRAELARVFTEHQP 75 (355)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCccc-cc-hhhhhhcc---cCCceEEEECCCcChHHHHHHHhhcCC
Confidence 579999999999999999999999987554 4443221 11 11111110 013578899999999999999986679
Q ss_pred CEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHc---------CCCEEEEeccccccCCCC--CCCccCCCCCC
Q 019795 83 EAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKY---------NCKKLVFSSSATIYGQPE--KIPCVEDFPYG 151 (335)
Q Consensus 83 d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~---------~~~~~v~~Ss~~vyg~~~--~~~~~e~~~~~ 151 (335)
|+|||+|+......+...+..++++|+.++.+++++|++. +++++|++||.++||... ..+++|+.+..
T Consensus 76 D~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~E~~~~~ 155 (355)
T PRK10217 76 DCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYA 155 (355)
T ss_pred CEEEECCcccCcchhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhcCCCCCCCCCcCCCCCCC
Confidence 9999999986544445667889999999999999999762 467999999999998642 34688988888
Q ss_pred CCChhHHhHHHHHHHHHHHHhhCCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHHH-HHHHhCCCCceeEecccCC
Q 019795 152 AMNPYGRTKQWCEEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYI-QQVAVGRHPELNVYGQDYP 230 (335)
Q Consensus 152 ~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~ 230 (335)
|.+.|+.||.++|.+++.+++++ +++++++||+++|||+.. +..+++.+ .+...+. + ++++|
T Consensus 156 p~s~Y~~sK~~~e~~~~~~~~~~-~~~~~i~r~~~v~Gp~~~----------~~~~~~~~~~~~~~~~-~-~~~~g---- 218 (355)
T PRK10217 156 PSSPYSASKASSDHLVRAWLRTY-GLPTLITNCSNNYGPYHF----------PEKLIPLMILNALAGK-P-LPVYG---- 218 (355)
T ss_pred CCChhHHHHHHHHHHHHHHHHHh-CCCeEEEeeeeeeCCCCC----------cccHHHHHHHHHhcCC-C-ceEeC----
Confidence 99999999999999999988877 999999999999999532 23355544 4444443 3 56777
Q ss_pred CCCCceeeeeeeHhhhhc----------cCceEEecCCccccHHHHHHHHHHHhCCCCC------------ceeCCCCCC
Q 019795 231 TKDGSAVRDYIHVMDLAD----------GCIAYNLGNGKGISVLEMVAAFEKASGKKIP------------IKFCPRRVG 288 (335)
Q Consensus 231 ~~~~~~~~~~v~~~D~~~----------~~~~~nv~~~~~~s~~el~~~i~~~~g~~~~------------~~~~~~~~~ 288 (335)
++++.++|+|++|+++ .+++||+++++.+|++|+++.+.+.++...+ +...+..+.
T Consensus 219 --~g~~~~~~i~v~D~a~a~~~~~~~~~~~~~yni~~~~~~s~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (355)
T PRK10217 219 --NGQQIRDWLYVEDHARALYCVATTGKVGETYNIGGHNERKNLDVVETICELLEELAPNKPQGVAHYRDLITFVADRPG 296 (355)
T ss_pred --CCCeeeCcCcHHHHHHHHHHHHhcCCCCCeEEeCCCCcccHHHHHHHHHHHhcccccccccccccccccceecCCCCC
Confidence 7899999999999987 3679999999999999999999999885321 111222333
Q ss_pred ccceeeccHHHHHHhcCCccccCHHHHHHHHHHHHhcCCC
Q 019795 289 DATAVYAATDKAHKELGWKPKYGIEDMCAHQWNWAKNNPM 328 (335)
Q Consensus 289 ~~~~~~~d~~k~~~~Lg~~p~~~~~~~~~~~~~~~~~~~~ 328 (335)
....+.+|++|+++.|||+|+++++++|+++++|++.+..
T Consensus 297 ~~~~~~~d~~k~~~~lg~~p~~~l~e~l~~~~~~~~~~~~ 336 (355)
T PRK10217 297 HDLRYAIDASKIARELGWLPQETFESGMRKTVQWYLANES 336 (355)
T ss_pred CCcccccCHHHHHHhcCCCCcCcHHHHHHHHHHHHHhCHH
Confidence 4456788999999999999999999999999999998765
|
|
| >TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-45 Score=332.33 Aligned_cols=306 Identities=26% Similarity=0.355 Sum_probs=243.8
Q ss_pred CCCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcC
Q 019795 1 MASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQ 80 (335)
Q Consensus 1 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~ 80 (335)
++++|+||||||+||||+++++.|+++|++|++++|+..........+. . ...+.++.+|++|.+++.++++..
T Consensus 1 ~~~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~-----~~~~~~~~~Dl~~~~~~~~~~~~~ 74 (349)
T TIGR02622 1 FWQGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLN-L-----AKKIEDHFGDIRDAAKLRKAIAEF 74 (349)
T ss_pred CcCCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHh-h-----cCCceEEEccCCCHHHHHHHHhhc
Confidence 4678999999999999999999999999999999987654432222221 0 135778999999999999999977
Q ss_pred CCCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcC-CCEEEEeccccccCCCCC-CCccCCCCCCCCChhHH
Q 019795 81 KFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYN-CKKLVFSSSATIYGQPEK-IPCVEDFPYGAMNPYGR 158 (335)
Q Consensus 81 ~~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~v~~Ss~~vyg~~~~-~~~~e~~~~~~~~~Y~~ 158 (335)
++|+|||+|+......+..++...+++|+.++.+++++|++.+ ++++|++||..+||.... .+.+|+.+..|.++|+.
T Consensus 75 ~~d~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~~e~~~~~p~~~Y~~ 154 (349)
T TIGR02622 75 KPEIVFHLAAQPLVRKSYADPLETFETNVMGTVNLLEAIRAIGSVKAVVNVTSDKCYRNDEWVWGYRETDPLGGHDPYSS 154 (349)
T ss_pred CCCEEEECCcccccccchhCHHHHHHHhHHHHHHHHHHHHhcCCCCEEEEEechhhhCCCCCCCCCccCCCCCCCCcchh
Confidence 7999999999765545566788999999999999999998876 789999999999987533 46788888889999999
Q ss_pred hHHHHHHHHHHHHhhC------CCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHHHhCCCCceeEecccCCCC
Q 019795 159 TKQWCEEIAFDVQKAD------PEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTK 232 (335)
Q Consensus 159 sK~~~E~~~~~~~~~~------~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 232 (335)
+|.++|.+++.+..++ ++++++++||+++|||+.. . ...+++.+...+..+.+ +.+ +
T Consensus 155 sK~~~e~~~~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~~~------~---~~~~~~~~~~~~~~g~~-~~~-~------ 217 (349)
T TIGR02622 155 SKACAELVIASYRSSFFGVANFHGIKIASARAGNVIGGGDW------A---EDRLIPDVIRAFSSNKI-VII-R------ 217 (349)
T ss_pred HHHHHHHHHHHHHHHhhcccccCCCcEEEEccCcccCCCcc------h---hhhhhHHHHHHHhcCCC-eEE-C------
Confidence 9999999999887653 3799999999999998531 0 12355666555544444 444 4
Q ss_pred CCceeeeeeeHhhhhc-------c--------CceEEecCC--ccccHHHHHHHHHHHhCC-CCCceeC--CCCCCccce
Q 019795 233 DGSAVRDYIHVMDLAD-------G--------CIAYNLGNG--KGISVLEMVAAFEKASGK-KIPIKFC--PRRVGDATA 292 (335)
Q Consensus 233 ~~~~~~~~v~~~D~~~-------~--------~~~~nv~~~--~~~s~~el~~~i~~~~g~-~~~~~~~--~~~~~~~~~ 292 (335)
++.+.++|+|++|+++ . +++|||+++ +++|+.|+++.+.+.++. ++.+... +..+.+...
T Consensus 218 ~g~~~rd~i~v~D~a~a~~~~~~~~~~~~~~~~~~yni~s~~~~~~s~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (349)
T TIGR02622 218 NPDATRPWQHVLEPLSGYLLLAEKLFTGQAEFAGAWNFGPRASDNARVVELVVDALEFWWGDDAEWEDDSDLNHPHEARL 297 (349)
T ss_pred CCCcccceeeHHHHHHHHHHHHHHHhhcCccccceeeeCCCcccCcCHHHHHHHHHHHhcCCCCceeeccCCCCCcccce
Confidence 5889999999999886 1 469999975 789999999999998763 3333332 233445566
Q ss_pred eeccHHHHHHhcCCccccCHHHHHHHHHHHHhcCCCC
Q 019795 293 VYAATDKAHKELGWKPKYGIEDMCAHQWNWAKNNPMG 329 (335)
Q Consensus 293 ~~~d~~k~~~~Lg~~p~~~~~~~~~~~~~~~~~~~~~ 329 (335)
..+|++|+++.|||+|+++++++|+++++|++++..+
T Consensus 298 ~~~d~~k~~~~lgw~p~~~l~~gi~~~i~w~~~~~~~ 334 (349)
T TIGR02622 298 LKLDSSKARTLLGWHPRWGLEEAVSRTVDWYKAWLRG 334 (349)
T ss_pred eecCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHhcC
Confidence 7889999999999999999999999999999986543
|
Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose. |
| >PLN02653 GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-45 Score=331.71 Aligned_cols=307 Identities=21% Similarity=0.241 Sum_probs=240.9
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCc-hhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCC
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSV-PEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQK 81 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~ 81 (335)
++|+||||||+||||++|+++|+++|++|++++|..... ......+.... .....++.++.+|++|.+++.++++...
T Consensus 5 ~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~Dl~d~~~~~~~~~~~~ 83 (340)
T PLN02653 5 PRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDP-HPNKARMKLHYGDLSDASSLRRWLDDIK 83 (340)
T ss_pred CCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhcccc-ccccCceEEEEecCCCHHHHHHHHHHcC
Confidence 578999999999999999999999999999998865421 11111111000 0112458899999999999999998767
Q ss_pred CCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCC-----EEEEeccccccCCCCCCCccCCCCCCCCChh
Q 019795 82 FEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCK-----KLVFSSSATIYGQPEKIPCVEDFPYGAMNPY 156 (335)
Q Consensus 82 ~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~-----~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~Y 156 (335)
+|+|||+|+.........++...+++|+.++.+++++|++.+++ ++|++||.++||.... +.+|+.+..|.+.|
T Consensus 84 ~d~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss~~vyg~~~~-~~~E~~~~~p~~~Y 162 (340)
T PLN02653 84 PDEVYNLAAQSHVAVSFEMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAGSSEMYGSTPP-PQSETTPFHPRSPY 162 (340)
T ss_pred CCEEEECCcccchhhhhhChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEeccHHHhCCCCC-CCCCCCCCCCCChh
Confidence 89999999986554455667788899999999999999988764 8999999999997654 78899999999999
Q ss_pred HHhHHHHHHHHHHHHhhCCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHHHhCCCCceeEecccCCCCCCce
Q 019795 157 GRTKQWCEEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSA 236 (335)
Q Consensus 157 ~~sK~~~E~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 236 (335)
+.||.++|.+++.++.++ ++.++..|+.++|||+.. .......+..++.++..+... ..++| ++++
T Consensus 163 ~~sK~~~e~~~~~~~~~~-~~~~~~~~~~~~~gp~~~------~~~~~~~~~~~~~~~~~~~~~-~~~~g------~g~~ 228 (340)
T PLN02653 163 AVAKVAAHWYTVNYREAY-GLFACNGILFNHESPRRG------ENFVTRKITRAVGRIKVGLQK-KLFLG------NLDA 228 (340)
T ss_pred HHHHHHHHHHHHHHHHHc-CCeEEEeeeccccCCCCC------cccchhHHHHHHHHHHcCCCC-ceEeC------CCcc
Confidence 999999999999988877 888889999999998532 111122122233444455433 23457 7899
Q ss_pred eeeeeeHhhhhc---------cCceEEecCCccccHHHHHHHHHHHhCCC--CCceeCC--CCCCccceeeccHHHHHHh
Q 019795 237 VRDYIHVMDLAD---------GCIAYNLGNGKGISVLEMVAAFEKASGKK--IPIKFCP--RRVGDATAVYAATDKAHKE 303 (335)
Q Consensus 237 ~~~~v~~~D~~~---------~~~~~nv~~~~~~s~~el~~~i~~~~g~~--~~~~~~~--~~~~~~~~~~~d~~k~~~~ 303 (335)
.++|+|++|+++ .++.||+++++.+|+.|+++.+.+.+|.+ ..+...+ ..+.+.....+|++|+++.
T Consensus 229 ~rd~i~v~D~a~a~~~~~~~~~~~~yni~~g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~ 308 (340)
T PLN02653 229 SRDWGFAGDYVEAMWLMLQQEKPDDYVVATEESHTVEEFLEEAFGYVGLNWKDHVEIDPRYFRPAEVDNLKGDASKAREV 308 (340)
T ss_pred eecceeHHHHHHHHHHHHhcCCCCcEEecCCCceeHHHHHHHHHHHcCCCCCcceeeCcccCCccccccccCCHHHHHHH
Confidence 999999999998 25789999999999999999999999864 2222222 2455566778899999999
Q ss_pred cCCccccCHHHHHHHHHHHHhc
Q 019795 304 LGWKPKYGIEDMCAHQWNWAKN 325 (335)
Q Consensus 304 Lg~~p~~~~~~~~~~~~~~~~~ 325 (335)
|||+|+++++++|+++++|+++
T Consensus 309 lgw~p~~~l~~gi~~~~~~~~~ 330 (340)
T PLN02653 309 LGWKPKVGFEQLVKMMVDEDLE 330 (340)
T ss_pred hCCCCCCCHHHHHHHHHHHHHH
Confidence 9999999999999999999885
|
|
| >PLN02206 UDP-glucuronate decarboxylase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-44 Score=336.53 Aligned_cols=295 Identities=24% Similarity=0.432 Sum_probs=234.8
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCC
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKF 82 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~ 82 (335)
+.|+|||||||||||++|++.|+++|++|+++++....... .+.... ...+++++.+|+.+.. +. ++
T Consensus 118 ~~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~~~---~~~~~~---~~~~~~~i~~D~~~~~-----l~--~~ 184 (442)
T PLN02206 118 KGLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKE---NVMHHF---SNPNFELIRHDVVEPI-----LL--EV 184 (442)
T ss_pred CCCEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCCccchh---hhhhhc---cCCceEEEECCccChh-----hc--CC
Confidence 45899999999999999999999999999999875332111 111111 1146788999997753 33 68
Q ss_pred CEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccCCCCCCCccCCC-----CCCCCChhH
Q 019795 83 EAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQPEKIPCVEDF-----PYGAMNPYG 157 (335)
Q Consensus 83 d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~-----~~~~~~~Y~ 157 (335)
|+|||+|+.........++...+++|+.++.+++++|++.++ ++|++||+.+||.....+.+|+. |..+.+.|+
T Consensus 185 D~ViHlAa~~~~~~~~~~p~~~~~~Nv~gt~nLleaa~~~g~-r~V~~SS~~VYg~~~~~p~~E~~~~~~~P~~~~s~Y~ 263 (442)
T PLN02206 185 DQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYD 263 (442)
T ss_pred CEEEEeeeecchhhhhcCHHHHHHHHHHHHHHHHHHHHHhCC-EEEEECChHHhCCCCCCCCCccccccCCCCCccchHH
Confidence 999999997654444557788999999999999999999885 89999999999876656677763 445567899
Q ss_pred HhHHHHHHHHHHHHhhCCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHH-HHHHHHhCCCCceeEecccCCCCCCce
Q 019795 158 RTKQWCEEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMP-YIQQVAVGRHPELNVYGQDYPTKDGSA 236 (335)
Q Consensus 158 ~sK~~~E~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~ 236 (335)
.+|.++|+++..+.+.+ +++++++||+++||++.... ...+++ ++..++.++ + +.++| ++.+
T Consensus 264 ~SK~~aE~~~~~y~~~~-g~~~~ilR~~~vyGp~~~~~--------~~~~v~~~i~~~l~~~-~-i~i~g------~G~~ 326 (442)
T PLN02206 264 EGKRTAETLTMDYHRGA-NVEVRIARIFNTYGPRMCID--------DGRVVSNFVAQALRKE-P-LTVYG------DGKQ 326 (442)
T ss_pred HHHHHHHHHHHHHHHHh-CCCeEEEEeccccCCCCCcc--------ccchHHHHHHHHHcCC-C-cEEeC------CCCE
Confidence 99999999999887776 99999999999999953211 122344 444544544 4 57788 7899
Q ss_pred eeeeeeHhhhhc---------cCceEEecCCccccHHHHHHHHHHHhCCCCCceeCCCCCCccceeeccHHHHHHhcCCc
Q 019795 237 VRDYIHVMDLAD---------GCIAYNLGNGKGISVLEMVAAFEKASGKKIPIKFCPRRVGDATAVYAATDKAHKELGWK 307 (335)
Q Consensus 237 ~~~~v~~~D~~~---------~~~~~nv~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~d~~k~~~~Lg~~ 307 (335)
.++|+|++|+++ .+++||+++++.+|+.|+++.+.+.++.+..+.+.+....+.....+|++|++++|||+
T Consensus 327 ~rdfi~V~Dva~ai~~a~e~~~~g~yNIgs~~~~sl~Elae~i~~~~g~~~~i~~~p~~~~~~~~~~~d~sKa~~~LGw~ 406 (442)
T PLN02206 327 TRSFQFVSDLVEGLMRLMEGEHVGPFNLGNPGEFTMLELAKVVQETIDPNAKIEFRPNTEDDPHKRKPDITKAKELLGWE 406 (442)
T ss_pred EEeEEeHHHHHHHHHHHHhcCCCceEEEcCCCceeHHHHHHHHHHHhCCCCceeeCCCCCCCccccccCHHHHHHHcCCC
Confidence 999999999997 35689999999999999999999999877766666655555667789999999999999
Q ss_pred cccCHHHHHHHHHHHHhcCCC
Q 019795 308 PKYGIEDMCAHQWNWAKNNPM 328 (335)
Q Consensus 308 p~~~~~~~~~~~~~~~~~~~~ 328 (335)
|+++|+++|+++++|+++...
T Consensus 407 P~~~l~egl~~~~~~~~~~~~ 427 (442)
T PLN02206 407 PKVSLRQGLPLMVKDFRQRVF 427 (442)
T ss_pred CCCCHHHHHHHHHHHHHHhhh
Confidence 999999999999999987544
|
|
| >PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-45 Score=331.12 Aligned_cols=300 Identities=21% Similarity=0.353 Sum_probs=231.7
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhC-CCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCC-CHHHHHHHHhcCC
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQG-GFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLR-NKDDLDKLFSSQK 81 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~-d~~~~~~~~~~~~ 81 (335)
||+|||||||||||++|+++|++. |++|++++|+.... ..+. . ...++++.+|++ +.+.+.++++ +
T Consensus 1 m~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~----~~~~---~---~~~~~~~~~Dl~~~~~~~~~~~~--~ 68 (347)
T PRK11908 1 MKKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRL----GDLV---N---HPRMHFFEGDITINKEWIEYHVK--K 68 (347)
T ss_pred CcEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHH----HHhc---c---CCCeEEEeCCCCCCHHHHHHHHc--C
Confidence 468999999999999999999986 69999998854221 1111 0 146889999998 6777888887 7
Q ss_pred CCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccCCCCCCCccCCCCC-------CCCC
Q 019795 82 FEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQPEKIPCVEDFPY-------GAMN 154 (335)
Q Consensus 82 ~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~-------~~~~ 154 (335)
+|+|||+|+.........+++..+++|+.++.+++++|++.+ +++|++||+.+||.....+++|+.+. .|.+
T Consensus 69 ~d~ViH~aa~~~~~~~~~~p~~~~~~n~~~~~~ll~aa~~~~-~~~v~~SS~~vyg~~~~~~~~ee~~~~~~~~~~~p~~ 147 (347)
T PRK11908 69 CDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYG-KHLVFPSTSEVYGMCPDEEFDPEASPLVYGPINKPRW 147 (347)
T ss_pred CCEEEECcccCChHHhhcCcHHHHHHHHHHHHHHHHHHHhcC-CeEEEEecceeeccCCCcCcCccccccccCcCCCccc
Confidence 999999999765444567788899999999999999999887 79999999999997655566666431 4567
Q ss_pred hhHHhHHHHHHHHHHHHhhCCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHHH-HHHHhCCCCceeEecccCCCCC
Q 019795 155 PYGRTKQWCEEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYI-QQVAVGRHPELNVYGQDYPTKD 233 (335)
Q Consensus 155 ~Y~~sK~~~E~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~ 233 (335)
.|+.+|.++|++++.+..++ +++++++||+++|||+......... + ...+++.+ .++..+. + +.+++ +
T Consensus 148 ~Y~~sK~~~e~~~~~~~~~~-~~~~~ilR~~~v~Gp~~~~~~~~~~-~-~~~~i~~~~~~~~~~~-~-~~~~~------~ 216 (347)
T PRK11908 148 IYACSKQLMDRVIWAYGMEE-GLNFTLFRPFNWIGPGLDSIYTPKE-G-SSRVVTQFLGHIVRGE-P-ISLVD------G 216 (347)
T ss_pred hHHHHHHHHHHHHHHHHHHc-CCCeEEEeeeeeeCCCccCCCcccc-C-CcchHHHHHHHHhCCC-c-eEEec------C
Confidence 89999999999999988777 9999999999999997543222111 1 23355544 4444444 4 56777 7
Q ss_pred CceeeeeeeHhhhhc--------c-----CceEEecCC-ccccHHHHHHHHHHHhCCCCCce---------eCCC-----
Q 019795 234 GSAVRDYIHVMDLAD--------G-----CIAYNLGNG-KGISVLEMVAAFEKASGKKIPIK---------FCPR----- 285 (335)
Q Consensus 234 ~~~~~~~v~~~D~~~--------~-----~~~~nv~~~-~~~s~~el~~~i~~~~g~~~~~~---------~~~~----- 285 (335)
+.+.++|+|++|+++ . +++||++++ ..+|++|+++.|.+.++..+.+. ..+.
T Consensus 217 g~~~r~~i~v~D~a~a~~~~~~~~~~~~~g~~yni~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (347)
T PRK11908 217 GSQKRAFTDIDDGIDALMKIIENKDGVASGKIYNIGNPKNNHSVRELANKMLELAAEYPEYAESAKKVKLVETTSGAYYG 296 (347)
T ss_pred CceeeccccHHHHHHHHHHHHhCccccCCCCeEEeCCCCCCcCHHHHHHHHHHHhcCcccccccccccccccCCchhccC
Confidence 889999999999997 1 579999987 47999999999999998543321 1111
Q ss_pred -CCCccceeeccHHHHHHhcCCccccCHHHHHHHHHHHHhcCC
Q 019795 286 -RVGDATAVYAATDKAHKELGWKPKYGIEDMCAHQWNWAKNNP 327 (335)
Q Consensus 286 -~~~~~~~~~~d~~k~~~~Lg~~p~~~~~~~~~~~~~~~~~~~ 327 (335)
..........|++|+++.|||+|+++++++++++++|++++.
T Consensus 297 ~~~~~~~~~~~d~~k~~~~lGw~p~~~l~~~l~~~~~~~~~~~ 339 (347)
T PRK11908 297 KGYQDVQNRVPKIDNTMQELGWAPKTTMDDALRRIFEAYRGHV 339 (347)
T ss_pred cCcchhccccCChHHHHHHcCCCCCCcHHHHHHHHHHHHHHHH
Confidence 011223556789999999999999999999999999998754
|
|
| >PLN02427 UDP-apiose/xylose synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-44 Score=333.88 Aligned_cols=308 Identities=19% Similarity=0.336 Sum_probs=228.2
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhC-CCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCC
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQG-GFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQK 81 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~ 81 (335)
+.|+|||||||||||++|+++|+++ |++|++++|+..... .+..........+++++.+|++|.+.+.++++ +
T Consensus 13 ~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~----~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~--~ 86 (386)
T PLN02427 13 KPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIK----HLLEPDTVPWSGRIQFHRINIKHDSRLEGLIK--M 86 (386)
T ss_pred cCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhh----hhhccccccCCCCeEEEEcCCCChHHHHHHhh--c
Confidence 4578999999999999999999998 599999988643221 11111000112468999999999999999998 7
Q ss_pred CCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccCCCCCCCccCCCCC-----------
Q 019795 82 FEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQPEKIPCVEDFPY----------- 150 (335)
Q Consensus 82 ~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~----------- 150 (335)
+|+|||+|+.........++...+..|+.++.+++++|++.+ +++|++||.++||.....+.+|+.|.
T Consensus 87 ~d~ViHlAa~~~~~~~~~~~~~~~~~n~~gt~~ll~aa~~~~-~r~v~~SS~~vYg~~~~~~~~e~~p~~~~~~~~~~~e 165 (386)
T PLN02427 87 ADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFSTCEVYGKTIGSFLPKDHPLRQDPAFYVLKE 165 (386)
T ss_pred CCEEEEcccccChhhhhhChHHHHHHHHHHHHHHHHHHHhcC-CEEEEEeeeeeeCCCcCCCCCcccccccccccccccc
Confidence 899999999754433344566677889999999999998887 79999999999987533233332221
Q ss_pred -----------CCCChhHHhHHHHHHHHHHHHhhCCCCeEEEEecccccCCCCCCCCCCC-CCCCCCChHHHHHHHHhCC
Q 019795 151 -----------GAMNPYGRTKQWCEEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGED-PKGIPNNLMPYIQQVAVGR 218 (335)
Q Consensus 151 -----------~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~ 218 (335)
.|.+.|+.+|.++|++++.+.+.+ +++++++||++||||+.....+.. +......+++.+...+..+
T Consensus 166 ~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 244 (386)
T PLN02427 166 DESPCIFGSIEKQRWSYACAKQLIERLIYAEGAEN-GLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRR 244 (386)
T ss_pred cccccccCCCCccccchHHHHHHHHHHHHHHHhhc-CCceEEecccceeCCCCCccccccccccccchHHHHHHHHHhcC
Confidence 234579999999999999887776 999999999999999753222210 1111223444444333334
Q ss_pred CCceeEecccCCCCCCceeeeeeeHhhhhc------------cCceEEecCC-ccccHHHHHHHHHHHhCCCC--C---c
Q 019795 219 HPELNVYGQDYPTKDGSAVRDYIHVMDLAD------------GCIAYNLGNG-KGISVLEMVAAFEKASGKKI--P---I 280 (335)
Q Consensus 219 ~~~~~~~g~~~~~~~~~~~~~~v~~~D~~~------------~~~~~nv~~~-~~~s~~el~~~i~~~~g~~~--~---~ 280 (335)
.+ +.++| ++.+.++|+|++|+++ .+++||++++ +.+|+.|+++.+.+.+|... + .
T Consensus 245 ~~-~~~~g------~g~~~r~~i~V~Dva~ai~~al~~~~~~~g~~yni~~~~~~~s~~el~~~i~~~~g~~~~~~~~~~ 317 (386)
T PLN02427 245 EP-LKLVD------GGQSQRTFVYIKDAIEAVLLMIENPARANGHIFNVGNPNNEVTVRQLAEMMTEVYAKVSGEPALEE 317 (386)
T ss_pred CC-eEEEC------CCCceECcEeHHHHHHHHHHHHhCcccccCceEEeCCCCCCccHHHHHHHHHHHhccccccccccc
Confidence 44 66777 7888999999999997 1469999987 59999999999999988421 1 1
Q ss_pred --eeCCC------CCCccceeeccHHHHHHhcCCccccCHHHHHHHHHHHHhc
Q 019795 281 --KFCPR------RVGDATAVYAATDKAHKELGWKPKYGIEDMCAHQWNWAKN 325 (335)
Q Consensus 281 --~~~~~------~~~~~~~~~~d~~k~~~~Lg~~p~~~~~~~~~~~~~~~~~ 325 (335)
...+. ...+......|.+|+++.|||+|+++++++|+++++|++.
T Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lGw~p~~~l~~gl~~~~~~~~~ 370 (386)
T PLN02427 318 PTVDVSSKEFYGEGYDDSDKRIPDMTIINKQLGWNPKTSLWDLLESTLTYQHK 370 (386)
T ss_pred cccccCcccccCccccchhhccCCHHHHHHhcCCCcCccHHHHHHHHHHHHHH
Confidence 01111 1124456788999999999999999999999999999876
|
|
| >PLN02572 UDP-sulfoquinovose synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-44 Score=335.59 Aligned_cols=314 Identities=27% Similarity=0.349 Sum_probs=232.7
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchh-------------hHHhhhhhcCCccccceeEEEccCC
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPE-------------AVDRVKDLAGPELAKKLEFHVGDLR 68 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-------------~~~~~~~~~~~~~~~~i~~~~~Dl~ 68 (335)
.+||+||||||+||||++|+++|+++|++|+++++....... ....+..... ....++.++.+|++
T Consensus 45 ~~~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~v~~v~~Dl~ 123 (442)
T PLN02572 45 SKKKKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKE-VSGKEIELYVGDIC 123 (442)
T ss_pred ccCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHH-hhCCcceEEECCCC
Confidence 467899999999999999999999999999998753221100 0011110000 00136889999999
Q ss_pred CHHHHHHHHhcCCCCEEEEcccccchhhhhcC---hHHHHHHhHHHHHHHHHHHHHcCCC-EEEEeccccccCCCCCCCc
Q 019795 69 NKDDLDKLFSSQKFEAVIHFGALKAVAESVQH---PFRYFDNNLIGTINLYQAMAKYNCK-KLVFSSSATIYGQPEKIPC 144 (335)
Q Consensus 69 d~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~---~~~~~~~nv~~~~~l~~~~~~~~~~-~~v~~Ss~~vyg~~~~~~~ 144 (335)
|.+.+.++++..++|+|||+|+......+..+ ++..+++|+.|+.+++++|++.+++ ++|++||.++||... .+.
T Consensus 124 d~~~v~~~l~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~gv~~~~V~~SS~~vYG~~~-~~~ 202 (442)
T PLN02572 124 DFEFLSEAFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFAPDCHLVKLGTMGEYGTPN-IDI 202 (442)
T ss_pred CHHHHHHHHHhCCCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhCCCccEEEEecceecCCCC-CCC
Confidence 99999999987779999999977443333322 3466789999999999999998875 899999999998643 222
Q ss_pred cC-----------C---CCCCCCChhHHhHHHHHHHHHHHHhhCCCCeEEEEecccccCCCCCCCCCC-------CCCCC
Q 019795 145 VE-----------D---FPYGAMNPYGRTKQWCEEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGE-------DPKGI 203 (335)
Q Consensus 145 ~e-----------~---~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~g~-------~~~~~ 203 (335)
+| + .+..|.++|+.||.++|.+++.+.+.+ +++++++||++||||++....-. .....
T Consensus 203 ~E~~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~~-gl~~v~lR~~~vyGp~~~~~~~~~~li~~~~~~~~ 281 (442)
T PLN02572 203 EEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW-GIRATDLNQGVVYGVRTDETMMDEELINRLDYDGV 281 (442)
T ss_pred cccccccccccccccccCCCCCCCcchhHHHHHHHHHHHHHHhc-CCCEEEEecccccCCCCcccccccccccccCcccc
Confidence 22 2 255677899999999999999888887 99999999999999964321000 00000
Q ss_pred CCChHH-HHHHHHhCCCCceeEecccCCCCCCceeeeeeeHhhhhc-----------cC--ceEEecCCccccHHHHHHH
Q 019795 204 PNNLMP-YIQQVAVGRHPELNVYGQDYPTKDGSAVRDYIHVMDLAD-----------GC--IAYNLGNGKGISVLEMVAA 269 (335)
Q Consensus 204 ~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~v~~~D~~~-----------~~--~~~nv~~~~~~s~~el~~~ 269 (335)
...+++ ++..++.++ + +.++| +|.+.|+|+|++|+++ .+ .+||+++ +.+|+.|+++.
T Consensus 282 ~~~~i~~~~~~~~~g~-~-i~v~g------~G~~~Rdfi~V~Dva~a~~~al~~~~~~g~~~i~Nigs-~~~si~el~~~ 352 (442)
T PLN02572 282 FGTALNRFCVQAAVGH-P-LTVYG------KGGQTRGFLDIRDTVRCIEIAIANPAKPGEFRVFNQFT-EQFSVNELAKL 352 (442)
T ss_pred hhhHHHHHHHHHhcCC-C-ceecC------CCCEEECeEEHHHHHHHHHHHHhChhhcCceeEEEeCC-CceeHHHHHHH
Confidence 012333 444555554 3 67788 8999999999999997 12 4799976 68999999999
Q ss_pred HHHH---hCCCCCceeCCCC--CCccceeeccHHHHHHhcCCcccc---CHHHHHHHHHHHHhcCCC
Q 019795 270 FEKA---SGKKIPIKFCPRR--VGDATAVYAATDKAHKELGWKPKY---GIEDMCAHQWNWAKNNPM 328 (335)
Q Consensus 270 i~~~---~g~~~~~~~~~~~--~~~~~~~~~d~~k~~~~Lg~~p~~---~~~~~~~~~~~~~~~~~~ 328 (335)
+.+. +|.+..+...+.+ ..+......|.+|++ .|||+|++ ++.+++.+++.|++++..
T Consensus 353 i~~~~~~~g~~~~~~~~p~~~~~~~~~~~~~d~~k~~-~LGw~p~~~~~~l~~~l~~~~~~~~~~~~ 418 (442)
T PLN02572 353 VTKAGEKLGLDVEVISVPNPRVEAEEHYYNAKHTKLC-ELGLEPHLLSDSLLDSLLNFAVKYKDRVD 418 (442)
T ss_pred HHHHHHhhCCCCCeeeCCCCcccccccccCccHHHHH-HcCCCCCCcHHHHHHHHHHHHHHHHhhcc
Confidence 9999 8877666555433 333346678999997 59999999 899999999999997655
|
|
| >KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-45 Score=303.48 Aligned_cols=300 Identities=26% Similarity=0.433 Sum_probs=252.2
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhC--CCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCC
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQG--GFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQK 81 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~ 81 (335)
.++++||||.||||++.+..+... .++.+.++.-.--.. ...+.. ....++..++.+|+.++..+..++....
T Consensus 6 ~~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~--~~~l~~---~~n~p~ykfv~~di~~~~~~~~~~~~~~ 80 (331)
T KOG0747|consen 6 EKNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSN--LKNLEP---VRNSPNYKFVEGDIADADLVLYLFETEE 80 (331)
T ss_pred cceEEEecCcCcchhhhhhhcccCCCCCcEEEEeecccccc--cchhhh---hccCCCceEeeccccchHHHHhhhccCc
Confidence 478999999999999999999986 577777654321111 112222 1224789999999999999999999889
Q ss_pred CCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHc-CCCEEEEeccccccCCCCCCCcc-CCCCCCCCChhHHh
Q 019795 82 FEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKY-NCKKLVFSSSATIYGQPEKIPCV-EDFPYGAMNPYGRT 159 (335)
Q Consensus 82 ~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~-~~~~~v~~Ss~~vyg~~~~~~~~-e~~~~~~~~~Y~~s 159 (335)
+|.|+|.|+..++..+.-++....+.|+.++..|+++++.. ++++|||+||..|||.....-.. |.+.+.|.++|+.+
T Consensus 81 id~vihfaa~t~vd~s~~~~~~~~~nnil~t~~Lle~~~~sg~i~~fvhvSTdeVYGds~~~~~~~E~s~~nPtnpyAas 160 (331)
T KOG0747|consen 81 IDTVIHFAAQTHVDRSFGDSFEFTKNNILSTHVLLEAVRVSGNIRRFVHVSTDEVYGDSDEDAVVGEASLLNPTNPYAAS 160 (331)
T ss_pred hhhhhhhHhhhhhhhhcCchHHHhcCCchhhhhHHHHHHhccCeeEEEEecccceecCccccccccccccCCCCCchHHH
Confidence 99999999999888888899999999999999999999988 57899999999999998665544 89999999999999
Q ss_pred HHHHHHHHHHHHhhCCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHHHhCCCCceeEecccCCCCCCceeee
Q 019795 160 KQWCEEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAVRD 239 (335)
Q Consensus 160 K~~~E~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 239 (335)
|+++|+.++++..++ +++++++|..+||||++. +-.++|-+...+..+.+ .++.| +|.+.|+
T Consensus 161 KaAaE~~v~Sy~~sy-~lpvv~~R~nnVYGP~q~----------~~klipkFi~l~~~~~~-~~i~g------~g~~~rs 222 (331)
T KOG0747|consen 161 KAAAEMLVRSYGRSY-GLPVVTTRMNNVYGPNQY----------PEKLIPKFIKLAMRGKE-YPIHG------DGLQTRS 222 (331)
T ss_pred HHHHHHHHHHHhhcc-CCcEEEEeccCccCCCcC----------hHHHhHHHHHHHHhCCC-cceec------Cccccee
Confidence 999999999999998 999999999999999765 45567755554433333 78888 9999999
Q ss_pred eeeHhhhhc----------cCceEEecCCccccHHHHHHHHHHHhCCC-------CCceeCCCCCCccceeeccHHHHHH
Q 019795 240 YIHVMDLAD----------GCIAYNLGNGKGISVLEMVAAFEKASGKK-------IPIKFCPRRVGDATAVYAATDKAHK 302 (335)
Q Consensus 240 ~v~~~D~~~----------~~~~~nv~~~~~~s~~el~~~i~~~~g~~-------~~~~~~~~~~~~~~~~~~d~~k~~~ 302 (335)
|+|++|+++ .+++|||++....+..|+++.|.+.+... +.+.+.+.++....+..++.+|++
T Consensus 223 ~l~veD~~ea~~~v~~Kg~~geIYNIgtd~e~~~~~l~k~i~eli~~~~~~~~~~p~~~~v~dRp~nd~Ry~~~~eKik- 301 (331)
T KOG0747|consen 223 YLYVEDVSEAFKAVLEKGELGEIYNIGTDDEMRVIDLAKDICELFEKRLPNIDTEPFIFFVEDRPYNDLRYFLDDEKIK- 301 (331)
T ss_pred eEeHHHHHHHHHHHHhcCCccceeeccCcchhhHHHHHHHHHHHHHHhccCCCCCCcceecCCCCcccccccccHHHHH-
Confidence 999999998 48999999999999999999999987642 233445556666667899999997
Q ss_pred hcCCccccCHHHHHHHHHHHHhcCC
Q 019795 303 ELGWKPKYGIEDMCAHQWNWAKNNP 327 (335)
Q Consensus 303 ~Lg~~p~~~~~~~~~~~~~~~~~~~ 327 (335)
.|||+|+++|+++++.+++|+.++-
T Consensus 302 ~LGw~~~~p~~eGLrktie~y~~~~ 326 (331)
T KOG0747|consen 302 KLGWRPTTPWEEGLRKTIEWYTKNF 326 (331)
T ss_pred hcCCcccCcHHHHHHHHHHHHHhhh
Confidence 9999999999999999999998865
|
|
| >PLN02695 GDP-D-mannose-3',5'-epimerase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-43 Score=325.25 Aligned_cols=297 Identities=23% Similarity=0.295 Sum_probs=233.4
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCC
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKF 82 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~ 82 (335)
.+|+|||||||||||++|++.|.++|++|++++|........ ......++.+|++|.+.+.+++. ++
T Consensus 20 ~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~~~~-----------~~~~~~~~~~Dl~d~~~~~~~~~--~~ 86 (370)
T PLN02695 20 EKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEHMSE-----------DMFCHEFHLVDLRVMENCLKVTK--GV 86 (370)
T ss_pred CCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEecccccccc-----------ccccceEEECCCCCHHHHHHHHh--CC
Confidence 468999999999999999999999999999999864321100 00135778899999998888887 78
Q ss_pred CEEEEcccccchhh-hhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccCCCCC----CCccCCC--CCCCCCh
Q 019795 83 EAVIHFGALKAVAE-SVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQPEK----IPCVEDF--PYGAMNP 155 (335)
Q Consensus 83 d~vi~~a~~~~~~~-~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~----~~~~e~~--~~~~~~~ 155 (335)
|+|||+|+...... ...++...+..|+.++.+++++|++.++++|||+||.++||.... .++.|+. +..|.+.
T Consensus 87 D~Vih~Aa~~~~~~~~~~~~~~~~~~N~~~t~nll~aa~~~~vk~~V~~SS~~vYg~~~~~~~~~~~~E~~~~p~~p~s~ 166 (370)
T PLN02695 87 DHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEAARINGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDA 166 (370)
T ss_pred CEEEEcccccCCccccccCchhhHHHHHHHHHHHHHHHHHhCCCEEEEeCchhhcCCccccCcCCCcCcccCCCCCCCCH
Confidence 99999998642111 122345667889999999999999999999999999999986532 2466654 6778889
Q ss_pred hHHhHHHHHHHHHHHHhhCCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHH-HHHHHHhCCCCceeEecccCCCCCC
Q 019795 156 YGRTKQWCEEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMP-YIQQVAVGRHPELNVYGQDYPTKDG 234 (335)
Q Consensus 156 Y~~sK~~~E~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~ 234 (335)
|+.+|..+|++++.+...+ +++++++||+++|||+.... .....+.+ ++.+++....+ +.++| ++
T Consensus 167 Yg~sK~~~E~~~~~~~~~~-g~~~~ilR~~~vyGp~~~~~------~~~~~~~~~~~~~~~~~~~~-i~~~g------~g 232 (370)
T PLN02695 167 YGLEKLATEELCKHYTKDF-GIECRIGRFHNIYGPFGTWK------GGREKAPAAFCRKALTSTDE-FEMWG------DG 232 (370)
T ss_pred HHHHHHHHHHHHHHHHHHh-CCCEEEEEECCccCCCCCcc------ccccccHHHHHHHHHcCCCC-eEEeC------CC
Confidence 9999999999999988877 99999999999999964311 00111222 44444443344 78888 89
Q ss_pred ceeeeeeeHhhhhc---------cCceEEecCCccccHHHHHHHHHHHhCCCCCceeCCCCCCccceeeccHHHHHHhcC
Q 019795 235 SAVRDYIHVMDLAD---------GCIAYNLGNGKGISVLEMVAAFEKASGKKIPIKFCPRRVGDATAVYAATDKAHKELG 305 (335)
Q Consensus 235 ~~~~~~v~~~D~~~---------~~~~~nv~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~d~~k~~~~Lg 305 (335)
++.++|+|++|+++ .+++||+++++.+|++|+++.+.+..|.+.++...+.... ......|++|+++.||
T Consensus 233 ~~~r~~i~v~D~a~ai~~~~~~~~~~~~nv~~~~~~s~~el~~~i~~~~g~~~~i~~~~~~~~-~~~~~~d~sk~~~~lg 311 (370)
T PLN02695 233 KQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIALSFENKKLPIKHIPGPEG-VRGRNSDNTLIKEKLG 311 (370)
T ss_pred CeEEeEEeHHHHHHHHHHHHhccCCCceEecCCCceeHHHHHHHHHHHhCCCCCceecCCCCC-ccccccCHHHHHHhcC
Confidence 99999999999998 4578999999999999999999999997766655543322 2345689999999999
Q ss_pred CccccCHHHHHHHHHHHHhcCC
Q 019795 306 WKPKYGIEDMCAHQWNWAKNNP 327 (335)
Q Consensus 306 ~~p~~~~~~~~~~~~~~~~~~~ 327 (335)
|+|+++++++|+++++|++++.
T Consensus 312 w~p~~~l~e~i~~~~~~~~~~~ 333 (370)
T PLN02695 312 WAPTMRLKDGLRITYFWIKEQI 333 (370)
T ss_pred CCCCCCHHHHHHHHHHHHHHHH
Confidence 9999999999999999998754
|
|
| >PRK10084 dTDP-glucose 4,6 dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-43 Score=324.29 Aligned_cols=300 Identities=26% Similarity=0.467 Sum_probs=233.4
Q ss_pred CeEEEEcCCChhhHHHHHHHHhCCCe-EEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCCC
Q 019795 5 KNILVTGGAGFIGTHCALQLLQGGFK-VVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKFE 83 (335)
Q Consensus 5 ~~vlItGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~d 83 (335)
|+|||||||||||++|+++|+++|++ |+++++...... ...+..+.. ...+.++.+|++|.+++.++++..++|
T Consensus 1 mkilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~--~~~~~~~~~---~~~~~~~~~Dl~d~~~~~~~~~~~~~d 75 (352)
T PRK10084 1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGN--LESLADVSD---SERYVFEHADICDRAELDRIFAQHQPD 75 (352)
T ss_pred CeEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccch--HHHHHhccc---CCceEEEEecCCCHHHHHHHHHhcCCC
Confidence 48999999999999999999999976 555554321111 111111110 145788999999999999999866799
Q ss_pred EEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHc---------CCCEEEEeccccccCCCC---------C-CCc
Q 019795 84 AVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKY---------NCKKLVFSSSATIYGQPE---------K-IPC 144 (335)
Q Consensus 84 ~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~---------~~~~~v~~Ss~~vyg~~~---------~-~~~ 144 (335)
+|||+|+.........+++.++++|+.|+.+++++|++. +++++|++||.++||... . .++
T Consensus 76 ~vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~ 155 (352)
T PRK10084 76 AVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDLPHPDEVENSEELPLF 155 (352)
T ss_pred EEEECCcccCCcchhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhcCCCCccccccccccCCCc
Confidence 999999975433344567789999999999999999864 456899999999998631 1 246
Q ss_pred cCCCCCCCCChhHHhHHHHHHHHHHHHhhCCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHHH-HHHHhCCCCcee
Q 019795 145 VEDFPYGAMNPYGRTKQWCEEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYI-QQVAVGRHPELN 223 (335)
Q Consensus 145 ~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~ 223 (335)
+|+.+..|.+.|+.||..+|++++.+++++ +++++++|+++||||+.. ...+++.+ ..+..+. + +.
T Consensus 156 ~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-g~~~vilr~~~v~Gp~~~----------~~~~~~~~~~~~~~~~-~-~~ 222 (352)
T PRK10084 156 TETTAYAPSSPYSASKASSDHLVRAWLRTY-GLPTIVTNCSNNYGPYHF----------PEKLIPLVILNALEGK-P-LP 222 (352)
T ss_pred cccCCCCCCChhHHHHHHHHHHHHHHHHHh-CCCEEEEeccceeCCCcC----------ccchHHHHHHHHhcCC-C-eE
Confidence 888888999999999999999999988877 999999999999999532 22355544 4444443 3 67
Q ss_pred EecccCCCCCCceeeeeeeHhhhhc----------cCceEEecCCccccHHHHHHHHHHHhCCCCCc--------eeCCC
Q 019795 224 VYGQDYPTKDGSAVRDYIHVMDLAD----------GCIAYNLGNGKGISVLEMVAAFEKASGKKIPI--------KFCPR 285 (335)
Q Consensus 224 ~~g~~~~~~~~~~~~~~v~~~D~~~----------~~~~~nv~~~~~~s~~el~~~i~~~~g~~~~~--------~~~~~ 285 (335)
++| ++.+.++|+|++|+++ .+++||+++++.+|++|+++.+.+.++...+. ...+.
T Consensus 223 ~~~------~g~~~~~~v~v~D~a~a~~~~l~~~~~~~~yni~~~~~~s~~~~~~~i~~~~~~~~p~~~~~~~~~~~~~~ 296 (352)
T PRK10084 223 IYG------KGDQIRDWLYVEDHARALYKVVTEGKAGETYNIGGHNEKKNLDVVLTICDLLDEIVPKATSYREQITYVAD 296 (352)
T ss_pred EeC------CCCeEEeeEEHHHHHHHHHHHHhcCCCCceEEeCCCCcCcHHHHHHHHHHHhccccccccchhhhcccccc
Confidence 777 7899999999999998 36799999999999999999999999853221 11122
Q ss_pred CCCccceeeccHHHHHHhcCCccccCHHHHHHHHHHHHhcCCC
Q 019795 286 RVGDATAVYAATDKAHKELGWKPKYGIEDMCAHQWNWAKNNPM 328 (335)
Q Consensus 286 ~~~~~~~~~~d~~k~~~~Lg~~p~~~~~~~~~~~~~~~~~~~~ 328 (335)
.+.....+.+|++|+++.|||+|+++++++|+++++|+++++.
T Consensus 297 ~~~~~~~~~~d~~k~~~~lg~~p~~~l~~~l~~~~~~~~~~~~ 339 (352)
T PRK10084 297 RPGHDRRYAIDASKISRELGWKPQETFESGIRKTVEWYLANTE 339 (352)
T ss_pred CCCCCceeeeCHHHHHHHcCCCCcCCHHHHHHHHHHHHHhCHH
Confidence 2333446678999999999999999999999999999998754
|
|
| >PLN02260 probable rhamnose biosynthetic enzyme | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-43 Score=347.67 Aligned_cols=306 Identities=27% Similarity=0.444 Sum_probs=244.2
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhC--CCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQG--GFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~ 79 (335)
.++|+|||||||||||++|+++|+++ +++|++++|...... ...+... ...+++.++.+|++|.+.+..++..
T Consensus 4 ~~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~--~~~l~~~---~~~~~v~~~~~Dl~d~~~~~~~~~~ 78 (668)
T PLN02260 4 YEPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSN--LKNLNPS---KSSPNFKFVKGDIASADLVNYLLIT 78 (668)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccch--hhhhhhc---ccCCCeEEEECCCCChHHHHHHHhh
Confidence 35789999999999999999999997 688999987432111 1111110 0115789999999999988887765
Q ss_pred CCCCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcC-CCEEEEeccccccCCCCCCC---ccCCCCCCCCCh
Q 019795 80 QKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYN-CKKLVFSSSATIYGQPEKIP---CVEDFPYGAMNP 155 (335)
Q Consensus 80 ~~~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~v~~Ss~~vyg~~~~~~---~~e~~~~~~~~~ 155 (335)
.++|+|||+|+......+..++...+++|+.++.+++++|++.+ +++|||+||..+||.....+ ..|+.+..|.++
T Consensus 79 ~~~D~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~vkr~I~~SS~~vyg~~~~~~~~~~~E~~~~~p~~~ 158 (668)
T PLN02260 79 EGIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDADVGNHEASQLLPTNP 158 (668)
T ss_pred cCCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcchHHhCCCccccccCccccCCCCCCCC
Confidence 68999999999866554455667889999999999999999987 78999999999999764432 367778888899
Q ss_pred hHHhHHHHHHHHHHHHhhCCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHHHhCCCCceeEecccCCCCCCc
Q 019795 156 YGRTKQWCEEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGS 235 (335)
Q Consensus 156 Y~~sK~~~E~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 235 (335)
|+.+|..+|++++.+.+++ +++++++||++|||++.. ...+++.+...+..+.+ ++++| ++.
T Consensus 159 Y~~sK~~aE~~v~~~~~~~-~l~~vilR~~~VyGp~~~----------~~~~i~~~~~~a~~g~~-i~i~g------~g~ 220 (668)
T PLN02260 159 YSATKAGAEMLVMAYGRSY-GLPVITTRGNNVYGPNQF----------PEKLIPKFILLAMQGKP-LPIHG------DGS 220 (668)
T ss_pred cHHHHHHHHHHHHHHHHHc-CCCEEEECcccccCcCCC----------cccHHHHHHHHHhCCCC-eEEec------CCC
Confidence 9999999999999988877 999999999999999532 23355655444433334 67788 789
Q ss_pred eeeeeeeHhhhhc----------cCceEEecCCccccHHHHHHHHHHHhCCCCC--ceeCCCCCCccceeeccHHHHHHh
Q 019795 236 AVRDYIHVMDLAD----------GCIAYNLGNGKGISVLEMVAAFEKASGKKIP--IKFCPRRVGDATAVYAATDKAHKE 303 (335)
Q Consensus 236 ~~~~~v~~~D~~~----------~~~~~nv~~~~~~s~~el~~~i~~~~g~~~~--~~~~~~~~~~~~~~~~d~~k~~~~ 303 (335)
+.++|+|++|+++ .+++||+++++.+|+.|+++.+.+.+|.+.. +...+.++.......+|++|++ .
T Consensus 221 ~~r~~ihV~Dva~a~~~~l~~~~~~~vyni~~~~~~s~~el~~~i~~~~g~~~~~~i~~~~~~p~~~~~~~~d~~k~~-~ 299 (668)
T PLN02260 221 NVRSYLYCEDVAEAFEVVLHKGEVGHVYNIGTKKERRVIDVAKDICKLFGLDPEKSIKFVENRPFNDQRYFLDDQKLK-K 299 (668)
T ss_pred ceEeeEEHHHHHHHHHHHHhcCCCCCEEEECCCCeeEHHHHHHHHHHHhCCCCcceeeecCCCCCCcceeecCHHHHH-H
Confidence 9999999999997 3679999999999999999999999997643 2233334444456779999996 7
Q ss_pred cCCccccCHHHHHHHHHHHHhcCCCCcc
Q 019795 304 LGWKPKYGIEDMCAHQWNWAKNNPMGYQ 331 (335)
Q Consensus 304 Lg~~p~~~~~~~~~~~~~~~~~~~~~~~ 331 (335)
|||+|+++++++++++++|+++++.-|+
T Consensus 300 lGw~p~~~~~egl~~~i~w~~~~~~~~~ 327 (668)
T PLN02260 300 LGWQERTSWEEGLKKTMEWYTSNPDWWG 327 (668)
T ss_pred cCCCCCCCHHHHHHHHHHHHHhChhhhh
Confidence 9999999999999999999999887554
|
|
| >PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-43 Score=347.22 Aligned_cols=307 Identities=19% Similarity=0.305 Sum_probs=237.4
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhC-CCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHH-HHHHHhcC
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQG-GFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDD-LDKLFSSQ 80 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~-~~~~~~~~ 80 (335)
.+|+|||||||||||++|+++|++. |++|++++|....... +.. ..+++++.+|++|..+ +.++++
T Consensus 314 ~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~----~~~------~~~~~~~~gDl~d~~~~l~~~l~-- 381 (660)
T PRK08125 314 RRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISR----FLG------HPRFHFVEGDISIHSEWIEYHIK-- 381 (660)
T ss_pred cCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhh----hcC------CCceEEEeccccCcHHHHHHHhc--
Confidence 4689999999999999999999985 7999999986532211 100 1468899999998655 567777
Q ss_pred CCCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccCCCCCCCccCCCCC-------CCC
Q 019795 81 KFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQPEKIPCVEDFPY-------GAM 153 (335)
Q Consensus 81 ~~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~-------~~~ 153 (335)
++|+|||+|+.........+++.++++|+.++.+++++|++.+ +++||+||+++||.....+++|+.+. .|.
T Consensus 382 ~~D~ViHlAa~~~~~~~~~~~~~~~~~Nv~~t~~ll~a~~~~~-~~~V~~SS~~vyg~~~~~~~~E~~~~~~~~p~~~p~ 460 (660)
T PRK08125 382 KCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIIRYCVKYN-KRIIFPSTSEVYGMCTDKYFDEDTSNLIVGPINKQR 460 (660)
T ss_pred CCCEEEECccccCchhhccCHHHHHHhhHHHHHHHHHHHHhcC-CeEEEEcchhhcCCCCCCCcCccccccccCCCCCCc
Confidence 7999999999865544556777889999999999999999988 79999999999997655678887643 245
Q ss_pred ChhHHhHHHHHHHHHHHHhhCCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHH-HHHHHhCCCCceeEecccCCCC
Q 019795 154 NPYGRTKQWCEEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPY-IQQVAVGRHPELNVYGQDYPTK 232 (335)
Q Consensus 154 ~~Y~~sK~~~E~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~ 232 (335)
+.|+.||.++|++++.+++.+ +++++++||+++|||+....... ......+++. +..+..+. + +.++|
T Consensus 461 s~Yg~sK~~~E~~~~~~~~~~-g~~~~ilR~~~vyGp~~~~~~~~--~~~~~~~i~~~i~~~~~~~-~-i~~~g------ 529 (660)
T PRK08125 461 WIYSVSKQLLDRVIWAYGEKE-GLRFTLFRPFNWMGPRLDNLNAA--RIGSSRAITQLILNLVEGS-P-IKLVD------ 529 (660)
T ss_pred cchHHHHHHHHHHHHHHHHhc-CCceEEEEEceeeCCCccccccc--cccccchHHHHHHHhcCCC-C-eEEeC------
Confidence 689999999999999998887 99999999999999964321100 0001234444 44444444 4 66777
Q ss_pred CCceeeeeeeHhhhhc--------c-----CceEEecCCc-cccHHHHHHHHHHHhCCCCCceeCCCC------------
Q 019795 233 DGSAVRDYIHVMDLAD--------G-----CIAYNLGNGK-GISVLEMVAAFEKASGKKIPIKFCPRR------------ 286 (335)
Q Consensus 233 ~~~~~~~~v~~~D~~~--------~-----~~~~nv~~~~-~~s~~el~~~i~~~~g~~~~~~~~~~~------------ 286 (335)
++.+.++|+|++|+++ . +++||+++++ .+|++|+++.+.+.+|.+......+..
T Consensus 530 ~g~~~rd~i~v~Dva~a~~~~l~~~~~~~~g~iyni~~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 609 (660)
T PRK08125 530 GGKQKRCFTDIRDGIEALFRIIENKDNRCDGQIINIGNPDNEASIRELAEMLLASFEKHPLRDHFPPFAGFRVVESSSYY 609 (660)
T ss_pred CCceeeceeeHHHHHHHHHHHHhccccccCCeEEEcCCCCCceeHHHHHHHHHHHhccCcccccCCcccccccccccccc
Confidence 7899999999999997 1 4689999885 799999999999999854211111110
Q ss_pred ---CCccceeeccHHHHHHhcCCccccCHHHHHHHHHHHHhcCCCCcccC
Q 019795 287 ---VGDATAVYAATDKAHKELGWKPKYGIEDMCAHQWNWAKNNPMGYQTK 333 (335)
Q Consensus 287 ---~~~~~~~~~d~~k~~~~Lg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (335)
..+.....+|++|+++.|||+|+++++++|+++++|++++.....|+
T Consensus 610 ~~~~~~~~~~~~d~~ka~~~LGw~P~~~lee~l~~~i~~~~~~~~~~~~~ 659 (660)
T PRK08125 610 GKGYQDVEHRKPSIRNARRLLDWEPKIDMQETIDETLDFFLRTVDLTEKA 659 (660)
T ss_pred ccccccccccCCChHHHHHHhCCCCCCcHHHHHHHHHHHHHhcccccccC
Confidence 01234556799999999999999999999999999999988776553
|
|
| >TIGR01179 galE UDP-glucose-4-epimerase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-43 Score=316.43 Aligned_cols=314 Identities=51% Similarity=0.924 Sum_probs=255.0
Q ss_pred eEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCCCEE
Q 019795 6 NILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKFEAV 85 (335)
Q Consensus 6 ~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~d~v 85 (335)
+||||||||+||+++++.|+++|++|++++|...........+.. ..++.++.+|+++.+++.++++..++|+|
T Consensus 1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~~~~~~~------~~~~~~~~~D~~~~~~~~~~~~~~~~d~v 74 (328)
T TIGR01179 1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEALKRGER------ITRVTFVEGDLRDRELLDRLFEEHKIDAV 74 (328)
T ss_pred CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhhhhhhcc------ccceEEEECCCCCHHHHHHHHHhCCCcEE
Confidence 589999999999999999999999999887643332221111110 02577889999999999999986689999
Q ss_pred EEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccCCCCCCCccCCCCCCCCChhHHhHHHHHH
Q 019795 86 IHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQWCEE 165 (335)
Q Consensus 86 i~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~Y~~sK~~~E~ 165 (335)
||+|+.........++...++.|+.++.+++++|.+.+++++|++||.++||.....+++|+.+..|.+.|+.+|..+|+
T Consensus 75 v~~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~ss~~~~g~~~~~~~~e~~~~~~~~~y~~sK~~~e~ 154 (328)
T TIGR01179 75 IHFAGLIAVGESVQDPLKYYRNNVVNTLNLLEAMQQTGVKKFIFSSSAAVYGEPSSIPISEDSPLGPINPYGRSKLMSER 154 (328)
T ss_pred EECccccCcchhhcCchhhhhhhHHHHHHHHHHHHhcCCCEEEEecchhhcCCCCCCCccccCCCCCCCchHHHHHHHHH
Confidence 99999754444455667889999999999999999988889999999999987766688999988898999999999999
Q ss_pred HHHHHHhhCCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHHHhCCCCceeEecccCCCCCCceeeeeeeHhh
Q 019795 166 IAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAVRDYIHVMD 245 (335)
Q Consensus 166 ~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~v~~~D 245 (335)
+++.++++.++++++++||+++||+.+.+.+++.... ...+++.+.....+....+.++|+..+..++...++|||++|
T Consensus 155 ~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~D 233 (328)
T TIGR01179 155 ILRDLSKADPGLSYVILRYFNVAGADPEGTIGEDPPG-ITHLIPYACQVAVGKRDKLTIFGTDYPTPDGTCVRDYIHVMD 233 (328)
T ss_pred HHHHHHHhccCCCEEEEecCcccCCCCCCccccCCcc-cchHHHHHHHHHHhCCCCeEEeCCcccCCCCceEEeeeeHHH
Confidence 9998877634999999999999999876665554332 334677776666644333667776555567888999999999
Q ss_pred hhc-------------cCceEEecCCccccHHHHHHHHHHHhCCCCCceeCCCCCCccceeeccHHHHHHhcCCccccC-
Q 019795 246 LAD-------------GCIAYNLGNGKGISVLEMVAAFEKASGKKIPIKFCPRRVGDATAVYAATDKAHKELGWKPKYG- 311 (335)
Q Consensus 246 ~~~-------------~~~~~nv~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~d~~k~~~~Lg~~p~~~- 311 (335)
+++ .+++||+++++++|++|+++.+.+.+|.+..+...+....+......|++|+++.|||+|+++
T Consensus 234 ~a~~~~~~~~~~~~~~~~~~~n~~~~~~~s~~ei~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~p~~~~ 313 (328)
T TIGR01179 234 LADAHLAALEYLLNGGESHVYNLGYGQGFSVLEVIEAFKKVSGVDFPVELAPRRPGDPASLVADASKIRRELGWQPKYTD 313 (328)
T ss_pred HHHHHHHHHhhhhcCCCcceEEcCCCCcccHHHHHHHHHHHhCCCcceEeCCCCCccccchhcchHHHHHHhCCCCCcch
Confidence 987 257999999999999999999999999887776655555555566789999999999999997
Q ss_pred HHHHHHHHHHHHhcC
Q 019795 312 IEDMCAHQWNWAKNN 326 (335)
Q Consensus 312 ~~~~~~~~~~~~~~~ 326 (335)
++++|+++++|+++|
T Consensus 314 l~~~~~~~~~~~~~~ 328 (328)
T TIGR01179 314 LEIIIKTAWRWESRN 328 (328)
T ss_pred HHHHHHHHHHHHhcC
Confidence 999999999999876
|
This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately. |
| >KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-44 Score=296.96 Aligned_cols=294 Identities=25% Similarity=0.449 Sum_probs=247.1
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCCC
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKFE 83 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~d 83 (335)
+++|+||||.||||+||+..|..+|++|++++.....-... +.+-.+ ...++.+.-|+..+ ++. .+|
T Consensus 27 ~lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~ftg~k~n---~~~~~~---~~~fel~~hdv~~p-----l~~--evD 93 (350)
T KOG1429|consen 27 NLRILITGGAGFIGSHLVDKLMTEGHEVIALDNYFTGRKEN---LEHWIG---HPNFELIRHDVVEP-----LLK--EVD 93 (350)
T ss_pred CcEEEEecCcchHHHHHHHHHHhcCCeEEEEecccccchhh---cchhcc---CcceeEEEeechhH-----HHH--Hhh
Confidence 47899999999999999999999999999998754432221 211111 25677777777665 666 789
Q ss_pred EEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccCCCCCCCccCCC-----CCCCCChhHH
Q 019795 84 AVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQPEKIPCVEDF-----PYGAMNPYGR 158 (335)
Q Consensus 84 ~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~-----~~~~~~~Y~~ 158 (335)
.|+|+|+......-..++.+++..|+.++.+++..|++.+ +||+++||+.|||.+...|..|+. |..|.+.|..
T Consensus 94 ~IyhLAapasp~~y~~npvktIktN~igtln~lglakrv~-aR~l~aSTseVYgdp~~hpq~e~ywg~vnpigpr~cyde 172 (350)
T KOG1429|consen 94 QIYHLAAPASPPHYKYNPVKTIKTNVIGTLNMLGLAKRVG-ARFLLASTSEVYGDPLVHPQVETYWGNVNPIGPRSCYDE 172 (350)
T ss_pred hhhhhccCCCCcccccCccceeeecchhhHHHHHHHHHhC-ceEEEeecccccCCcccCCCccccccccCcCCchhhhhH
Confidence 9999999977767778888999999999999999999998 799999999999998777777764 4567888999
Q ss_pred hHHHHHHHHHHHHhhCCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHHHhCCCCceeEecccCCCCCCceee
Q 019795 159 TKQWCEEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAVR 238 (335)
Q Consensus 159 sK~~~E~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 238 (335)
.|..+|.++.++.+++ |+.+.|.|++|.|||..... ..+.+..+...+....+ +.++| +|.++|
T Consensus 173 gKr~aE~L~~~y~k~~-giE~rIaRifNtyGPrm~~~--------dgrvvsnf~~q~lr~ep-ltv~g------~G~qtR 236 (350)
T KOG1429|consen 173 GKRVAETLCYAYHKQE-GIEVRIARIFNTYGPRMHMD--------DGRVVSNFIAQALRGEP-LTVYG------DGKQTR 236 (350)
T ss_pred HHHHHHHHHHHhhccc-CcEEEEEeeecccCCccccC--------CChhhHHHHHHHhcCCC-eEEEc------CCcceE
Confidence 9999999999999998 99999999999999975422 23345555555555556 99999 999999
Q ss_pred eeeeHhhhhc---------cCceEEecCCccccHHHHHHHHHHHhCCCCCceeCCCCCCccceeeccHHHHHHhcCCccc
Q 019795 239 DYIHVMDLAD---------GCIAYNLGNGKGISVLEMVAAFEKASGKKIPIKFCPRRVGDATAVYAATDKAHKELGWKPK 309 (335)
Q Consensus 239 ~~v~~~D~~~---------~~~~~nv~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~d~~k~~~~Lg~~p~ 309 (335)
+|+|++|+++ ..+-+||++++.+|+.|+++.+.+..+-...+.+....+.++.....|++++++.|||.|+
T Consensus 237 SF~yvsD~Vegll~Lm~s~~~~pvNiGnp~e~Tm~elAemv~~~~~~~s~i~~~~~~~Ddp~kR~pDit~ake~LgW~Pk 316 (350)
T KOG1429|consen 237 SFQYVSDLVEGLLRLMESDYRGPVNIGNPGEFTMLELAEMVKELIGPVSEIEFVENGPDDPRKRKPDITKAKEQLGWEPK 316 (350)
T ss_pred EEEeHHHHHHHHHHHhcCCCcCCcccCCccceeHHHHHHHHHHHcCCCcceeecCCCCCCccccCccHHHHHHHhCCCCC
Confidence 9999999987 3556999999999999999999999987777777777777888888999999999999999
Q ss_pred cCHHHHHHHHHHHHhcCC
Q 019795 310 YGIEDMCAHQWNWAKNNP 327 (335)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~ 327 (335)
.+|+++|..++.|+++.-
T Consensus 317 v~L~egL~~t~~~fr~~i 334 (350)
T KOG1429|consen 317 VSLREGLPLTVTYFRERI 334 (350)
T ss_pred CcHHHhhHHHHHHHHHHH
Confidence 999999999999999843
|
|
| >TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-42 Score=309.95 Aligned_cols=301 Identities=30% Similarity=0.519 Sum_probs=238.1
Q ss_pred eEEEEcCCChhhHHHHHHHHhCC--CeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCCC
Q 019795 6 NILVTGGAGFIGTHCALQLLQGG--FKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKFE 83 (335)
Q Consensus 6 ~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~d 83 (335)
+|+|||||||||++|+++|+++| ++|++++|...... .+.+.+... .+.+.++.+|++|++++.++++..++|
T Consensus 1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~--~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~~~d 75 (317)
T TIGR01181 1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGN--LENLADLED---NPRYRFVKGDIGDRELVSRLFTEHQPD 75 (317)
T ss_pred CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchh--hhhhhhhcc---CCCcEEEEcCCcCHHHHHHHHhhcCCC
Confidence 58999999999999999999987 78988876432111 111111110 146788999999999999999855699
Q ss_pred EEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCC-EEEEeccccccCCCCC-CCccCCCCCCCCChhHHhHH
Q 019795 84 AVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCK-KLVFSSSATIYGQPEK-IPCVEDFPYGAMNPYGRTKQ 161 (335)
Q Consensus 84 ~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~-~~v~~Ss~~vyg~~~~-~~~~e~~~~~~~~~Y~~sK~ 161 (335)
+|||+|+......+...++.++++|+.++.+++++|++.+.+ ++|++||.++||.... .+.+|+.+..|.+.|+.+|.
T Consensus 76 ~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~v~g~~~~~~~~~e~~~~~~~~~Y~~sK~ 155 (317)
T TIGR01181 76 AVVHFAAESHVDRSISGPAAFIETNVVGTYTLLEAVRKYWHEFRFHHISTDEVYGDLEKGDAFTETTPLAPSSPYSASKA 155 (317)
T ss_pred EEEEcccccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCceEEEeeccceeCCCCCCCCcCCCCCCCCCCchHHHHH
Confidence 999999986555555677789999999999999999887443 8999999999987543 36888888888899999999
Q ss_pred HHHHHHHHHHhhCCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHH-HHHHHhCCCCceeEecccCCCCCCceeeee
Q 019795 162 WCEEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPY-IQQVAVGRHPELNVYGQDYPTKDGSAVRDY 240 (335)
Q Consensus 162 ~~E~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 240 (335)
.+|.+++.+..+. +++++++||+.+||+... ...+++. +.....+. + +++++ ++++.++|
T Consensus 156 ~~e~~~~~~~~~~-~~~~~i~R~~~i~G~~~~----------~~~~~~~~~~~~~~~~-~-~~~~~------~g~~~~~~ 216 (317)
T TIGR01181 156 ASDHLVRAYHRTY-GLPALITRCSNNYGPYQF----------PEKLIPLMITNALAGK-P-LPVYG------DGQQVRDW 216 (317)
T ss_pred HHHHHHHHHHHHh-CCCeEEEEeccccCCCCC----------cccHHHHHHHHHhcCC-C-ceEeC------CCceEEee
Confidence 9999999888777 999999999999998532 2235554 44444444 3 56777 78889999
Q ss_pred eeHhhhhc----------cCceEEecCCccccHHHHHHHHHHHhCCCCCce-eCCCCCCccceeeccHHHHHHhcCCccc
Q 019795 241 IHVMDLAD----------GCIAYNLGNGKGISVLEMVAAFEKASGKKIPIK-FCPRRVGDATAVYAATDKAHKELGWKPK 309 (335)
Q Consensus 241 v~~~D~~~----------~~~~~nv~~~~~~s~~el~~~i~~~~g~~~~~~-~~~~~~~~~~~~~~d~~k~~~~Lg~~p~ 309 (335)
+|++|+++ .+++||+++++.+|++|+++.+.+.+|.+.... ..+..+.......+|++|+++.|||+|+
T Consensus 217 i~v~D~a~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lG~~p~ 296 (317)
T TIGR01181 217 LYVEDHCRAIYLVLEKGRVGETYNIGGGNERTNLEVVETILELLGKDEDLITHVEDRPGHDRRYAIDASKIKRELGWAPK 296 (317)
T ss_pred EEHHHHHHHHHHHHcCCCCCceEEeCCCCceeHHHHHHHHHHHhCCCcccccccCCCccchhhhcCCHHHHHHHhCCCCC
Confidence 99999997 357999999999999999999999999754332 2222233334456899999999999999
Q ss_pred cCHHHHHHHHHHHHhcCCCCc
Q 019795 310 YGIEDMCAHQWNWAKNNPMGY 330 (335)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~ 330 (335)
++++++++++++|++++..-|
T Consensus 297 ~~~~~~i~~~~~~~~~~~~~~ 317 (317)
T TIGR01181 297 YTFEEGLRKTVQWYLDNEWWW 317 (317)
T ss_pred CcHHHHHHHHHHHHHhccCCC
Confidence 999999999999999887655
|
This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor. |
| >PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-42 Score=309.26 Aligned_cols=272 Identities=17% Similarity=0.131 Sum_probs=217.7
Q ss_pred CeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCCCE
Q 019795 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKFEA 84 (335)
Q Consensus 5 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~d~ 84 (335)
|+||||||+||||++|+++|+++| +|++++|... .+.+|++|.+.+.++++..++|+
T Consensus 1 m~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~~----------------------~~~~Dl~d~~~~~~~~~~~~~D~ 57 (299)
T PRK09987 1 MNILLFGKTGQVGWELQRALAPLG-NLIALDVHST----------------------DYCGDFSNPEGVAETVRKIRPDV 57 (299)
T ss_pred CeEEEECCCCHHHHHHHHHhhccC-CEEEeccccc----------------------cccCCCCCHHHHHHHHHhcCCCE
Confidence 489999999999999999999999 7888877411 24679999999999998767999
Q ss_pred EEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccCCCCCCCccCCCCCCCCChhHHhHHHHH
Q 019795 85 VIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQWCE 164 (335)
Q Consensus 85 vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~Y~~sK~~~E 164 (335)
|||+|+......+..+++..+++|+.++.+++++|++.++ ++||+||..|||.....|++|+++..|.+.|+.+|..+|
T Consensus 58 Vih~Aa~~~~~~~~~~~~~~~~~N~~~~~~l~~aa~~~g~-~~v~~Ss~~Vy~~~~~~p~~E~~~~~P~~~Yg~sK~~~E 136 (299)
T PRK09987 58 IVNAAAHTAVDKAESEPEFAQLLNATSVEAIAKAANEVGA-WVVHYSTDYVFPGTGDIPWQETDATAPLNVYGETKLAGE 136 (299)
T ss_pred EEECCccCCcchhhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEccceEECCCCCCCcCCCCCCCCCCHHHHHHHHHH
Confidence 9999998776666677888899999999999999999985 799999999998876678999999999999999999999
Q ss_pred HHHHHHHhhCCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHHHhCCCCceeEecccCCCCCCceeeeeeeHh
Q 019795 165 EIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAVRDYIHVM 244 (335)
Q Consensus 165 ~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~v~~~ 244 (335)
++++.+ ..+.+++|++++|||.. ..+++.+.+.+..+.+ +.++|+. -+.+.+.+.+++
T Consensus 137 ~~~~~~-----~~~~~ilR~~~vyGp~~------------~~~~~~~~~~~~~~~~-~~v~~d~----~g~~~~~~~~~d 194 (299)
T PRK09987 137 KALQEH-----CAKHLIFRTSWVYAGKG------------NNFAKTMLRLAKEREE-LSVINDQ----FGAPTGAELLAD 194 (299)
T ss_pred HHHHHh-----CCCEEEEecceecCCCC------------CCHHHHHHHHHhcCCC-eEEeCCC----cCCCCCHHHHHH
Confidence 998765 33569999999999842 2355655555544444 6777721 155666666777
Q ss_pred hhhc----------cCceEEecCCccccHHHHHHHHHHHh---CCCCC---ceeC-----CCCCCccceeeccHHHHHHh
Q 019795 245 DLAD----------GCIAYNLGNGKGISVLEMVAAFEKAS---GKKIP---IKFC-----PRRVGDATAVYAATDKAHKE 303 (335)
Q Consensus 245 D~~~----------~~~~~nv~~~~~~s~~el~~~i~~~~---g~~~~---~~~~-----~~~~~~~~~~~~d~~k~~~~ 303 (335)
|++. ..++||+++++.+|+.|+++.|.+.+ |.+.+ +.+. +.....+.+..+|++|+++.
T Consensus 195 ~~~~~~~~~~~~~~~~giyni~~~~~~s~~e~~~~i~~~~~~~g~~~~~~~i~~~~~~~~~~~~~rp~~~~ld~~k~~~~ 274 (299)
T PRK09987 195 CTAHAIRVALNKPEVAGLYHLVASGTTTWHDYAALVFEEARKAGITLALNKLNAVPTSAYPTPARRPHNSRLNTEKFQQN 274 (299)
T ss_pred HHHHHHHHhhccCCCCCeEEeeCCCCccHHHHHHHHHHHHHhcCCCcCcCeeeecchhhcCCCCCCCCcccCCHHHHHHH
Confidence 7654 24699999999999999999998864 33321 2222 22334566778999999999
Q ss_pred cCCccccCHHHHHHHHHHHH
Q 019795 304 LGWKPKYGIEDMCAHQWNWA 323 (335)
Q Consensus 304 Lg~~p~~~~~~~~~~~~~~~ 323 (335)
|||+|+ +|+++|+++++.+
T Consensus 275 lg~~~~-~~~~~l~~~~~~~ 293 (299)
T PRK09987 275 FALVLP-DWQVGVKRMLTEL 293 (299)
T ss_pred hCCCCc-cHHHHHHHHHHHH
Confidence 999997 9999999999865
|
|
| >PLN02214 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-41 Score=309.09 Aligned_cols=294 Identities=19% Similarity=0.224 Sum_probs=223.2
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCC
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQK 81 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~ 81 (335)
.++|+||||||+||||++|+++|+++|++|++++|+....... .+..... ...++.++.+|++|.+++.++++ +
T Consensus 8 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~--~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~--~ 81 (342)
T PLN02214 8 PAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNT--HLRELEG--GKERLILCKADLQDYEALKAAID--G 81 (342)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHH--HHHHhhC--CCCcEEEEecCcCChHHHHHHHh--c
Confidence 3578999999999999999999999999999999875432111 1111110 01357889999999999999998 7
Q ss_pred CCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccc-cccCCCCC---CCccCCC------CCC
Q 019795 82 FEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSA-TIYGQPEK---IPCVEDF------PYG 151 (335)
Q Consensus 82 ~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~-~vyg~~~~---~~~~e~~------~~~ 151 (335)
+|+|||+|+.. ..++...++.|+.++.+++++|++.+++++|++||. ++||.... .+++|+. +..
T Consensus 82 ~d~Vih~A~~~-----~~~~~~~~~~nv~gt~~ll~aa~~~~v~r~V~~SS~~avyg~~~~~~~~~~~E~~~~~~~~~~~ 156 (342)
T PLN02214 82 CDGVFHTASPV-----TDDPEQMVEPAVNGAKFVINAAAEAKVKRVVITSSIGAVYMDPNRDPEAVVDESCWSDLDFCKN 156 (342)
T ss_pred CCEEEEecCCC-----CCCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeccceeeeccCCCCCCcccCcccCCChhhccc
Confidence 99999999974 235678899999999999999999999999999995 68975432 2477774 334
Q ss_pred CCChhHHhHHHHHHHHHHHHhhCCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHHHhCCCCceeEecccCCC
Q 019795 152 AMNPYGRTKQWCEEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPT 231 (335)
Q Consensus 152 ~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 231 (335)
|.+.|+.||.++|++++.+.+++ +++++++||++||||..... ... ....+...+.+... ..
T Consensus 157 p~~~Y~~sK~~aE~~~~~~~~~~-g~~~v~lRp~~vyGp~~~~~-------~~~-~~~~~~~~~~g~~~---~~------ 218 (342)
T PLN02214 157 TKNWYCYGKMVAEQAAWETAKEK-GVDLVVLNPVLVLGPPLQPT-------INA-SLYHVLKYLTGSAK---TY------ 218 (342)
T ss_pred cccHHHHHHHHHHHHHHHHHHHc-CCcEEEEeCCceECCCCCCC-------CCc-hHHHHHHHHcCCcc---cC------
Confidence 66789999999999999998887 99999999999999964311 011 22233344445432 12
Q ss_pred CCCceeeeeeeHhhhhc----------cCceEEecCCccccHHHHHHHHHHHhCC-CCCceeCCCCCCccceeeccHHHH
Q 019795 232 KDGSAVRDYIHVMDLAD----------GCIAYNLGNGKGISVLEMVAAFEKASGK-KIPIKFCPRRVGDATAVYAATDKA 300 (335)
Q Consensus 232 ~~~~~~~~~v~~~D~~~----------~~~~~nv~~~~~~s~~el~~~i~~~~g~-~~~~~~~~~~~~~~~~~~~d~~k~ 300 (335)
+...++|||++|+|+ .++.||+++ +.+++.|+++.+.+.++. +.+....+..........+|++|+
T Consensus 219 --~~~~~~~i~V~Dva~a~~~al~~~~~~g~yn~~~-~~~~~~el~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~ 295 (342)
T PLN02214 219 --ANLTQAYVDVRDVALAHVLVYEAPSASGRYLLAE-SARHRGEVVEILAKLFPEYPLPTKCKDEKNPRAKPYKFTNQKI 295 (342)
T ss_pred --CCCCcCeeEHHHHHHHHHHHHhCcccCCcEEEec-CCCCHHHHHHHHHHHCCCCCCCCCCccccCCCCCccccCcHHH
Confidence 234689999999998 356899976 578999999999999863 222222222233444556899999
Q ss_pred HHhcCCccccCHHHHHHHHHHHHhcCCCC
Q 019795 301 HKELGWKPKYGIEDMCAHQWNWAKNNPMG 329 (335)
Q Consensus 301 ~~~Lg~~p~~~~~~~~~~~~~~~~~~~~~ 329 (335)
+ .|||+|+ +++++|+++++|+++.+..
T Consensus 296 ~-~LG~~p~-~lee~i~~~~~~~~~~~~~ 322 (342)
T PLN02214 296 K-DLGLEFT-STKQSLYDTVKSLQEKGHL 322 (342)
T ss_pred H-HcCCccc-CHHHHHHHHHHHHHHcCCC
Confidence 7 6999995 9999999999999988754
|
|
| >PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-42 Score=309.27 Aligned_cols=289 Identities=24% Similarity=0.345 Sum_probs=226.1
Q ss_pred EEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCCCEEEE
Q 019795 8 LVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKFEAVIH 87 (335)
Q Consensus 8 lItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~d~vi~ 87 (335)
||||||||||++|+++|++.|++|+++.+. ..+|++|.+++.++++..++|+|||
T Consensus 1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~~-------------------------~~~Dl~~~~~l~~~~~~~~~d~Vih 55 (306)
T PLN02725 1 FVAGHRGLVGSAIVRKLEALGFTNLVLRTH-------------------------KELDLTRQADVEAFFAKEKPTYVIL 55 (306)
T ss_pred CcccCCCcccHHHHHHHHhCCCcEEEeecc-------------------------ccCCCCCHHHHHHHHhccCCCEEEE
Confidence 699999999999999999999988765321 2479999999999999878999999
Q ss_pred cccccch-hhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccCCCCCCCccCCC----CCCCCC-hhHHhHH
Q 019795 88 FGALKAV-AESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQPEKIPCVEDF----PYGAMN-PYGRTKQ 161 (335)
Q Consensus 88 ~a~~~~~-~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~----~~~~~~-~Y~~sK~ 161 (335)
+|+.... .....++...++.|+.++.+++++|++.+++++|++||+.+||.....+.+|++ +..|.+ .|+.+|.
T Consensus 56 ~A~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~ 135 (306)
T PLN02725 56 AAAKVGGIHANMTYPADFIRENLQIQTNVIDAAYRHGVKKLLFLGSSCIYPKFAPQPIPETALLTGPPEPTNEWYAIAKI 135 (306)
T ss_pred eeeeecccchhhhCcHHHHHHHhHHHHHHHHHHHHcCCCeEEEeCceeecCCCCCCCCCHHHhccCCCCCCcchHHHHHH
Confidence 9997532 223456678899999999999999999999999999999999976667888876 444544 4999999
Q ss_pred HHHHHHHHHHhhCCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHHHhCCCCceeEecccCCCCCCceeeeee
Q 019795 162 WCEEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAVRDYI 241 (335)
Q Consensus 162 ~~E~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~v 241 (335)
++|++++.+.+.. +++++++||+++||++... .+.. ......++..+......+.+...++| ++.+.++|+
T Consensus 136 ~~e~~~~~~~~~~-~~~~~~~R~~~vyG~~~~~-~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~------~g~~~~~~i 206 (306)
T PLN02725 136 AGIKMCQAYRIQY-GWDAISGMPTNLYGPHDNF-HPEN-SHVIPALIRRFHEAKANGAPEVVVWG------SGSPLREFL 206 (306)
T ss_pred HHHHHHHHHHHHh-CCCEEEEEecceeCCCCCC-CCCC-CcccHHHHHHHHHHhhcCCCeEEEcC------CCCeeeccc
Confidence 9999999887777 8999999999999996421 1111 11111122222222333334223367 788999999
Q ss_pred eHhhhhc----------cCceEEecCCccccHHHHHHHHHHHhCCCCCceeCCCCCCccceeeccHHHHHHhcCCccccC
Q 019795 242 HVMDLAD----------GCIAYNLGNGKGISVLEMVAAFEKASGKKIPIKFCPRRVGDATAVYAATDKAHKELGWKPKYG 311 (335)
Q Consensus 242 ~~~D~~~----------~~~~~nv~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~d~~k~~~~Lg~~p~~~ 311 (335)
|++|+++ ..+.||+++++.+|+.|+++.+.+.++.+..+...+..........+|++|++ .|||+|+++
T Consensus 207 ~v~Dv~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~-~lg~~p~~~ 285 (306)
T PLN02725 207 HVDDLADAVVFLMRRYSGAEHVNVGSGDEVTIKELAELVKEVVGFEGELVWDTSKPDGTPRKLMDSSKLR-SLGWDPKFS 285 (306)
T ss_pred cHHHHHHHHHHHHhccccCcceEeCCCCcccHHHHHHHHHHHhCCCCceeecCCCCCcccccccCHHHHH-HhCCCCCCC
Confidence 9999997 34689999999999999999999999977655554444444456678999996 699999999
Q ss_pred HHHHHHHHHHHHhcCCCCcc
Q 019795 312 IEDMCAHQWNWAKNNPMGYQ 331 (335)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~ 331 (335)
++++|+++++|++++...=|
T Consensus 286 ~~~~l~~~~~~~~~~~~~~~ 305 (306)
T PLN02725 286 LKDGLQETYKWYLENYETGG 305 (306)
T ss_pred HHHHHHHHHHHHHhhhhccC
Confidence 99999999999999876543
|
|
| >PLN02989 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-41 Score=305.23 Aligned_cols=296 Identities=18% Similarity=0.190 Sum_probs=222.5
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCC
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKF 82 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~ 82 (335)
.+|+||||||+||||++|+++|+++|++|++++|+........ .+.... ....++.++.+|++|.+++.++++ ++
T Consensus 4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~-~~~~~~--~~~~~~~~~~~D~~d~~~~~~~~~--~~ 78 (325)
T PLN02989 4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTD-HLLALD--GAKERLKLFKADLLDEGSFELAID--GC 78 (325)
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHH-HHHhcc--CCCCceEEEeCCCCCchHHHHHHc--CC
Confidence 4589999999999999999999999999999888765433221 111110 011468899999999999999998 79
Q ss_pred CEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHc-CCCEEEEeccccccCCC-----CCCCccCCCCCCC----
Q 019795 83 EAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKY-NCKKLVFSSSATIYGQP-----EKIPCVEDFPYGA---- 152 (335)
Q Consensus 83 d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~-~~~~~v~~Ss~~vyg~~-----~~~~~~e~~~~~~---- 152 (335)
|+|||+|+......+...+...+++|+.++.+++++|.+. +.++||++||.++|+.. ...+++|+.+..|
T Consensus 79 d~vih~A~~~~~~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~ 158 (325)
T PLN02989 79 ETVFHTASPVAITVKTDPQVELINPAVNGTINVLRTCTKVSSVKRVILTSSMAAVLAPETKLGPNDVVDETFFTNPSFAE 158 (325)
T ss_pred CEEEEeCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHcCCceEEEEecchhheecCCccCCCCCccCcCCCCchhHhc
Confidence 9999999975433334456788999999999999999885 56799999998876543 2345788877665
Q ss_pred --CChhHHhHHHHHHHHHHHHhhCCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHHHhCCCCceeEecccCC
Q 019795 153 --MNPYGRTKQWCEEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYP 230 (335)
Q Consensus 153 --~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 230 (335)
.+.|+.||..+|++++.+.+++ +++++++||+++|||..... .......+..+..++.+ +
T Consensus 159 ~~~~~Y~~sK~~~E~~~~~~~~~~-~~~~~ilR~~~vyGp~~~~~--------~~~~~~~i~~~~~~~~~-~-------- 220 (325)
T PLN02989 159 ERKQWYVLSKTLAEDAAWRFAKDN-EIDLIVLNPGLVTGPILQPT--------LNFSVAVIVELMKGKNP-F-------- 220 (325)
T ss_pred ccccchHHHHHHHHHHHHHHHHHc-CCeEEEEcCCceeCCCCCCC--------CCchHHHHHHHHcCCCC-C--------
Confidence 3579999999999999988877 99999999999999964311 11122345555555543 1
Q ss_pred CCCCceeeeeeeHhhhhc----------cCceEEecCCccccHHHHHHHHHHHhCCCCCceeCCC--CCCccceeeccHH
Q 019795 231 TKDGSAVRDYIHVMDLAD----------GCIAYNLGNGKGISVLEMVAAFEKASGKKIPIKFCPR--RVGDATAVYAATD 298 (335)
Q Consensus 231 ~~~~~~~~~~v~~~D~~~----------~~~~~nv~~~~~~s~~el~~~i~~~~g~~~~~~~~~~--~~~~~~~~~~d~~ 298 (335)
+.+.++|+|++|+++ .+++||+ +++.+|+.|+++.+.+.++.. .+...+. ..........|++
T Consensus 221 ---~~~~r~~i~v~Dva~a~~~~l~~~~~~~~~ni-~~~~~s~~ei~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 295 (325)
T PLN02989 221 ---NTTHHRFVDVRDVALAHVKALETPSANGRYII-DGPVVTIKDIENVLREFFPDL-CIADRNEDITELNSVTFNVCLD 295 (325)
T ss_pred ---CCcCcCeeEHHHHHHHHHHHhcCcccCceEEE-ecCCCCHHHHHHHHHHHCCCC-CCCCCCCCcccccccCcCCCHH
Confidence 124579999999997 2468999 566899999999999998732 1111111 1112235678999
Q ss_pred HHHHhcCCccccCHHHHHHHHHHHHhcCC
Q 019795 299 KAHKELGWKPKYGIEDMCAHQWNWAKNNP 327 (335)
Q Consensus 299 k~~~~Lg~~p~~~~~~~~~~~~~~~~~~~ 327 (335)
|+++ |||+|+++++++|+++++|+++.+
T Consensus 296 k~~~-lg~~p~~~l~~gi~~~~~~~~~~~ 323 (325)
T PLN02989 296 KVKS-LGIIEFTPTETSLRDTVLSLKEKC 323 (325)
T ss_pred HHHH-cCCCCCCCHHHHHHHHHHHHHHhC
Confidence 9975 999999999999999999998654
|
|
| >PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-41 Score=300.98 Aligned_cols=285 Identities=24% Similarity=0.292 Sum_probs=209.8
Q ss_pred EEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHH---H-HHHHHhc---
Q 019795 7 ILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKD---D-LDKLFSS--- 79 (335)
Q Consensus 7 vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~---~-~~~~~~~--- 79 (335)
|||||||||||++|+++|++.|++++++.|+...... . ..+..+|+.|.. + +.++++.
T Consensus 2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~~~~~~-~--------------~~~~~~~~~d~~~~~~~~~~~~~~~~~ 66 (308)
T PRK11150 2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK-F--------------VNLVDLDIADYMDKEDFLAQIMAGDDF 66 (308)
T ss_pred EEEecCCcHHHHHHHHHHHhCCCceEEEecCCCcchH-H--------------HhhhhhhhhhhhhHHHHHHHHhccccc
Confidence 7999999999999999999999977776554432111 0 011234555433 3 2333321
Q ss_pred CCCCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccCCCCCCCccCCCCCCCCChhHHh
Q 019795 80 QKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRT 159 (335)
Q Consensus 80 ~~~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~Y~~s 159 (335)
.++|+|||+|+..... ..++...++.|+.++.+++++|++.++ ++|++||+++||.....+.+|+.+..|.++|+.+
T Consensus 67 ~~~d~Vih~A~~~~~~--~~~~~~~~~~n~~~t~~ll~~~~~~~~-~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~s 143 (308)
T PRK11150 67 GDIEAIFHEGACSSTT--EWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSAATYGGRTDDFIEEREYEKPLNVYGYS 143 (308)
T ss_pred CCccEEEECceecCCc--CCChHHHHHHHHHHHHHHHHHHHHcCC-cEEEEcchHHhCcCCCCCCccCCCCCCCCHHHHH
Confidence 2699999999864322 234456799999999999999999887 6999999999997655577888888899999999
Q ss_pred HHHHHHHHHHHHhhCCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHHH-HHHHhCCCCceeEecccCCCCCCceee
Q 019795 160 KQWCEEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYI-QQVAVGRHPELNVYGQDYPTKDGSAVR 238 (335)
Q Consensus 160 K~~~E~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~ 238 (335)
|..+|++++.+.... +++++++||+++||++... .+....+...+ .++..+..+ ....| ++...+
T Consensus 144 K~~~E~~~~~~~~~~-~~~~~~lR~~~vyG~~~~~------~~~~~~~~~~~~~~~~~~~~~-~i~~g------~~~~~r 209 (308)
T PRK11150 144 KFLFDEYVRQILPEA-NSQICGFRYFNVYGPREGH------KGSMASVAFHLNNQLNNGENP-KLFEG------SENFKR 209 (308)
T ss_pred HHHHHHHHHHHHHHc-CCCEEEEeeeeecCCCCCC------CCccchhHHHHHHHHhcCCCC-EEecC------CCceee
Confidence 999999999887776 9999999999999996431 11112233333 455555543 22234 567889
Q ss_pred eeeeHhhhhc---------cCceEEecCCccccHHHHHHHHHHHhCCCCCceeCCCCC--C--ccceeeccHHHHHHhcC
Q 019795 239 DYIHVMDLAD---------GCIAYNLGNGKGISVLEMVAAFEKASGKKIPIKFCPRRV--G--DATAVYAATDKAHKELG 305 (335)
Q Consensus 239 ~~v~~~D~~~---------~~~~~nv~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~--~--~~~~~~~d~~k~~~~Lg 305 (335)
+|+|++|+++ .+++||+++++.+|+.|+++.+.+.++.. ++...+.+. . .......|++|++ .+|
T Consensus 210 ~~i~v~D~a~a~~~~~~~~~~~~yni~~~~~~s~~el~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~~k~~-~~g 287 (308)
T PRK11150 210 DFVYVGDVAAVNLWFWENGVSGIFNCGTGRAESFQAVADAVLAYHKKG-EIEYIPFPDKLKGRYQAFTQADLTKLR-AAG 287 (308)
T ss_pred eeeeHHHHHHHHHHHHhcCCCCeEEcCCCCceeHHHHHHHHHHHhCCC-cceeccCccccccccceecccCHHHHH-hcC
Confidence 9999999998 35799999999999999999999999853 222222111 1 1234578999997 479
Q ss_pred Ccccc-CHHHHHHHHHHHHhc
Q 019795 306 WKPKY-GIEDMCAHQWNWAKN 325 (335)
Q Consensus 306 ~~p~~-~~~~~~~~~~~~~~~ 325 (335)
|+|++ +++++|+++++|+.+
T Consensus 288 ~~p~~~~~~~gl~~~~~~~~~ 308 (308)
T PRK11150 288 YDKPFKTVAEGVAEYMAWLNR 308 (308)
T ss_pred CCCCCCCHHHHHHHHHHHhhC
Confidence 99975 999999999999863
|
|
| >PLN00198 anthocyanidin reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-40 Score=301.22 Aligned_cols=302 Identities=18% Similarity=0.238 Sum_probs=218.5
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCC
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQK 81 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~ 81 (335)
+++|+||||||+||||++|+++|+++|++|+++.|+........ .+..... .+++.++.+|++|.+++.++++ +
T Consensus 7 ~~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~---~~~~~~~~~Dl~d~~~~~~~~~--~ 80 (338)
T PLN00198 7 TGKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIA-HLRALQE---LGDLKIFGADLTDEESFEAPIA--G 80 (338)
T ss_pred CCCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHH-HHHhcCC---CCceEEEEcCCCChHHHHHHHh--c
Confidence 35789999999999999999999999999999888754322111 1111110 1357899999999999999998 7
Q ss_pred CCEEEEcccccchhhhhcCh-HHHHHHhHHHHHHHHHHHHHc-CCCEEEEeccccccCCCC----CCCccCCC-------
Q 019795 82 FEAVIHFGALKAVAESVQHP-FRYFDNNLIGTINLYQAMAKY-NCKKLVFSSSATIYGQPE----KIPCVEDF------- 148 (335)
Q Consensus 82 ~d~vi~~a~~~~~~~~~~~~-~~~~~~nv~~~~~l~~~~~~~-~~~~~v~~Ss~~vyg~~~----~~~~~e~~------- 148 (335)
+|+|||+|+.... ...++ ..++++|+.++.++++++.+. +++++|++||.++||... ..+.+|+.
T Consensus 81 ~d~vih~A~~~~~--~~~~~~~~~~~~nv~g~~~ll~a~~~~~~~~~~v~~SS~~~~g~~~~~~~~~~~~E~~~~~~~~~ 158 (338)
T PLN00198 81 CDLVFHVATPVNF--ASEDPENDMIKPAIQGVHNVLKACAKAKSVKRVILTSSAAAVSINKLSGTGLVMNEKNWTDVEFL 158 (338)
T ss_pred CCEEEEeCCCCcc--CCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeecceeeeccCCCCCCceeccccCCchhhh
Confidence 8999999996421 12233 356799999999999999886 578999999999998532 23445542
Q ss_pred --CCCCCChhHHhHHHHHHHHHHHHhhCCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHHHhCCCCceeEec
Q 019795 149 --PYGAMNPYGRTKQWCEEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYG 226 (335)
Q Consensus 149 --~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 226 (335)
+..|.++|+.||.++|.+++.+.+++ +++++++||++||||+.... ...++..+..+..+.. +.+.|
T Consensus 159 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-~~~~~~~R~~~vyGp~~~~~--------~~~~~~~~~~~~~~~~--~~~~g 227 (338)
T PLN00198 159 TSEKPPTWGYPASKTLAEKAAWKFAEEN-NIDLITVIPTLMAGPSLTSD--------IPSSLSLAMSLITGNE--FLING 227 (338)
T ss_pred hhcCCccchhHHHHHHHHHHHHHHHHhc-CceEEEEeCCceECCCccCC--------CCCcHHHHHHHHcCCc--ccccc
Confidence 34567789999999999999998887 99999999999999964311 1123333444444443 33333
Q ss_pred c-cCCCCCCceeeeeeeHhhhhc----------cCceEEecCCccccHHHHHHHHHHHhCC-CCCceeCCCCCCccceee
Q 019795 227 Q-DYPTKDGSAVRDYIHVMDLAD----------GCIAYNLGNGKGISVLEMVAAFEKASGK-KIPIKFCPRRVGDATAVY 294 (335)
Q Consensus 227 ~-~~~~~~~~~~~~~v~~~D~~~----------~~~~~nv~~~~~~s~~el~~~i~~~~g~-~~~~~~~~~~~~~~~~~~ 294 (335)
. ... .....++|+|++|+++ .++.| ++++..+|+.|+++.+.+.++. +.+..+.+.. ......
T Consensus 228 ~~~~~--~~~~~~~~i~V~D~a~a~~~~~~~~~~~~~~-~~~~~~~s~~el~~~i~~~~~~~~~~~~~~~~~--~~~~~~ 302 (338)
T PLN00198 228 LKGMQ--MLSGSISITHVEDVCRAHIFLAEKESASGRY-ICCAANTSVPELAKFLIKRYPQYQVPTDFGDFP--SKAKLI 302 (338)
T ss_pred ccccc--cccCCcceeEHHHHHHHHHHHhhCcCcCCcE-EEecCCCCHHHHHHHHHHHCCCCCCCccccccC--CCCccc
Confidence 1 000 0122479999999998 24578 4567789999999999998863 2322222111 223456
Q ss_pred ccHHHHHHhcCCccccCHHHHHHHHHHHHhcCCC
Q 019795 295 AATDKAHKELGWKPKYGIEDMCAHQWNWAKNNPM 328 (335)
Q Consensus 295 ~d~~k~~~~Lg~~p~~~~~~~~~~~~~~~~~~~~ 328 (335)
+|++|+++ +||+|+++++++|+++++|+++++.
T Consensus 303 ~~~~k~~~-~G~~p~~~l~~gi~~~~~~~~~~~~ 335 (338)
T PLN00198 303 ISSEKLIS-EGFSFEYGIEEIYDQTVEYFKAKGL 335 (338)
T ss_pred cChHHHHh-CCceecCcHHHHHHHHHHHHHHcCC
Confidence 89999976 6999999999999999999998653
|
|
| >PLN02662 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-40 Score=296.47 Aligned_cols=294 Identities=21% Similarity=0.236 Sum_probs=219.0
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCC
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKF 82 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~ 82 (335)
.+|+|||||||||||++|+++|+++|++|++++|+....... ..+..... ..+++.++.+|++|.+.+.++++ ++
T Consensus 3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~--~~~~~~~~~~Dl~~~~~~~~~~~--~~ 77 (322)
T PLN02662 3 EGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKT-EHLLALDG--AKERLHLFKANLLEEGSFDSVVD--GC 77 (322)
T ss_pred CCCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhhH-HHHHhccC--CCCceEEEeccccCcchHHHHHc--CC
Confidence 468999999999999999999999999999999875432211 11111100 11468899999999999999998 78
Q ss_pred CEEEEcccccchhhhhcChH-HHHHHhHHHHHHHHHHHHHc-CCCEEEEecccc--ccCCC---CCCCccCCCCCCC---
Q 019795 83 EAVIHFGALKAVAESVQHPF-RYFDNNLIGTINLYQAMAKY-NCKKLVFSSSAT--IYGQP---EKIPCVEDFPYGA--- 152 (335)
Q Consensus 83 d~vi~~a~~~~~~~~~~~~~-~~~~~nv~~~~~l~~~~~~~-~~~~~v~~Ss~~--vyg~~---~~~~~~e~~~~~~--- 152 (335)
|+|||+|+.... +..++. .++++|+.++.+++++|++. +++++|++||.+ +|+.. ...+++|+.+..|
T Consensus 78 d~Vih~A~~~~~--~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~v~~SS~~~~~y~~~~~~~~~~~~E~~~~~p~~~ 155 (322)
T PLN02662 78 EGVFHTASPFYH--DVTDPQAELIDPAVKGTLNVLRSCAKVPSVKRVVVTSSMAAVAYNGKPLTPDVVVDETWFSDPAFC 155 (322)
T ss_pred CEEEEeCCcccC--CCCChHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEccCHHHhcCCCcCCCCCCcCCcccCCChhHh
Confidence 999999987431 223343 78899999999999999887 889999999976 46532 2245778766554
Q ss_pred ---CChhHHhHHHHHHHHHHHHhhCCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHHHhCCCCceeEecccC
Q 019795 153 ---MNPYGRTKQWCEEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDY 229 (335)
Q Consensus 153 ---~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 229 (335)
.+.|+.+|.++|++++.+.+++ +++++++||+++|||..... .......+.....+...
T Consensus 156 ~~~~~~Y~~sK~~~E~~~~~~~~~~-~~~~~~lRp~~v~Gp~~~~~--------~~~~~~~~~~~~~~~~~--------- 217 (322)
T PLN02662 156 EESKLWYVLSKTLAEEAAWKFAKEN-GIDMVTINPAMVIGPLLQPT--------LNTSAEAILNLINGAQT--------- 217 (322)
T ss_pred hcccchHHHHHHHHHHHHHHHHHHc-CCcEEEEeCCcccCCCCCCC--------CCchHHHHHHHhcCCcc---------
Confidence 2579999999999999888877 99999999999999953211 11122334444443321
Q ss_pred CCCCCceeeeeeeHhhhhc----------cCceEEecCCccccHHHHHHHHHHHhCCCC-CceeCCCCCCccceeeccHH
Q 019795 230 PTKDGSAVRDYIHVMDLAD----------GCIAYNLGNGKGISVLEMVAAFEKASGKKI-PIKFCPRRVGDATAVYAATD 298 (335)
Q Consensus 230 ~~~~~~~~~~~v~~~D~~~----------~~~~~nv~~~~~~s~~el~~~i~~~~g~~~-~~~~~~~~~~~~~~~~~d~~ 298 (335)
.+.+.++|+|++|+|+ ..+.||++ +..+|+.|+++.+.+.++... +.. ............+|++
T Consensus 218 ---~~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~-g~~~s~~e~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~d~~ 292 (322)
T PLN02662 218 ---FPNASYRWVDVRDVANAHIQAFEIPSASGRYCLV-ERVVHYSEVVKILHELYPTLQLPEK-CADDKPYVPTYQVSKE 292 (322)
T ss_pred ---CCCCCcCeEEHHHHHHHHHHHhcCcCcCCcEEEe-CCCCCHHHHHHHHHHHCCCCCCCCC-CCCccccccccccChH
Confidence 1235689999999998 24578886 678999999999999876421 111 1111124456779999
Q ss_pred HHHHhcCCccccCHHHHHHHHHHHHhcCCC
Q 019795 299 KAHKELGWKPKYGIEDMCAHQWNWAKNNPM 328 (335)
Q Consensus 299 k~~~~Lg~~p~~~~~~~~~~~~~~~~~~~~ 328 (335)
|++ .|||+|+ +++++|+++++|+++++.
T Consensus 293 k~~-~lg~~~~-~~~~~l~~~~~~~~~~~~ 320 (322)
T PLN02662 293 KAK-SLGIEFI-PLEVSLKDTVESLKEKGF 320 (322)
T ss_pred HHH-HhCCccc-cHHHHHHHHHHHHHHcCC
Confidence 997 5999975 999999999999998875
|
|
| >PLN02896 cinnamyl-alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-40 Score=298.87 Aligned_cols=304 Identities=18% Similarity=0.256 Sum_probs=217.2
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCC
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKF 82 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~ 82 (335)
.+|+||||||+||||++|+++|+++|++|++++|+..........+.. ..++.++.+|++|.+++.++++ ++
T Consensus 9 ~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~------~~~~~~~~~Dl~~~~~~~~~~~--~~ 80 (353)
T PLN02896 9 ATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKE------GDRLRLFRADLQEEGSFDEAVK--GC 80 (353)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhcc------CCeEEEEECCCCCHHHHHHHHc--CC
Confidence 468999999999999999999999999999998865432222221110 1468899999999999999998 78
Q ss_pred CEEEEcccccchhh--hhcChHH-----HHHHhHHHHHHHHHHHHHcC-CCEEEEeccccccCCCCC-----CCccCCCC
Q 019795 83 EAVIHFGALKAVAE--SVQHPFR-----YFDNNLIGTINLYQAMAKYN-CKKLVFSSSATIYGQPEK-----IPCVEDFP 149 (335)
Q Consensus 83 d~vi~~a~~~~~~~--~~~~~~~-----~~~~nv~~~~~l~~~~~~~~-~~~~v~~Ss~~vyg~~~~-----~~~~e~~~ 149 (335)
|+|||+|+...... ...+++. +++.|+.++.+++++|++.+ +++||++||.++||.... .+++|+.+
T Consensus 81 d~Vih~A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~~~E~~~ 160 (353)
T PLN02896 81 DGVFHVAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSKTVKRVVFTSSISTLTAKDSNGRWRAVVDETCQ 160 (353)
T ss_pred CEEEECCccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcCCccEEEEEechhhccccccCCCCCCccCcccC
Confidence 99999999754321 2223333 34556799999999998874 789999999999985321 34666521
Q ss_pred --C-------CCCChhHHhHHHHHHHHHHHHhhCCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHHHhCCCC
Q 019795 150 --Y-------GAMNPYGRTKQWCEEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHP 220 (335)
Q Consensus 150 --~-------~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 220 (335)
. .+.++|+.||.++|++++.+.+.+ +++++++||++||||+.... .+ .++..+.....+...
T Consensus 161 ~p~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-~~~~~~lR~~~vyGp~~~~~-------~~-~~~~~~~~~~~g~~~ 231 (353)
T PLN02896 161 TPIDHVWNTKASGWVYVLSKLLTEEAAFKYAKEN-GIDLVSVITTTVAGPFLTPS-------VP-SSIQVLLSPITGDSK 231 (353)
T ss_pred CcHHHhhccCCCCccHHHHHHHHHHHHHHHHHHc-CCeEEEEcCCcccCCCcCCC-------CC-chHHHHHHHhcCCcc
Confidence 1 234589999999999999998888 99999999999999964311 11 223333332334322
Q ss_pred ceeEecccCCCCCCceeeeeeeHhhhhc----------cCceEEecCCccccHHHHHHHHHHHhCCC-CCceeCCCCCCc
Q 019795 221 ELNVYGQDYPTKDGSAVRDYIHVMDLAD----------GCIAYNLGNGKGISVLEMVAAFEKASGKK-IPIKFCPRRVGD 289 (335)
Q Consensus 221 ~~~~~g~~~~~~~~~~~~~~v~~~D~~~----------~~~~~nv~~~~~~s~~el~~~i~~~~g~~-~~~~~~~~~~~~ 289 (335)
.+.+.+.. ......++|+|++|+++ .++.|++ ++..+|+.|+++.+.+.++.. ..+...+....+
T Consensus 232 ~~~~~~~~---~~~~~~~dfi~v~Dva~a~~~~l~~~~~~~~~~~-~~~~~s~~el~~~i~~~~~~~~~~~~~~~~~~~~ 307 (353)
T PLN02896 232 LFSILSAV---NSRMGSIALVHIEDICDAHIFLMEQTKAEGRYIC-CVDSYDMSELINHLSKEYPCSNIQVRLDEEKRGS 307 (353)
T ss_pred cccccccc---ccccCceeEEeHHHHHHHHHHHHhCCCcCccEEe-cCCCCCHHHHHHHHHHhCCCCCccccccccccCc
Confidence 12222100 01112469999999998 2457864 677899999999999998733 222222222222
Q ss_pred cceeeccHHHHHHhcCCccccCHHHHHHHHHHHHhcCCCC
Q 019795 290 ATAVYAATDKAHKELGWKPKYGIEDMCAHQWNWAKNNPMG 329 (335)
Q Consensus 290 ~~~~~~d~~k~~~~Lg~~p~~~~~~~~~~~~~~~~~~~~~ 329 (335)
. ....|++|++ .|||+|+++++++|+++++|+++++..
T Consensus 308 ~-~~~~~~~~~~-~lGw~p~~~l~~~i~~~~~~~~~~~~~ 345 (353)
T PLN02896 308 I-PSEISSKKLR-DLGFEYKYGIEEIIDQTIDCCVDHGFL 345 (353)
T ss_pred c-ccccCHHHHH-HcCCCccCCHHHHHHHHHHHHHHCCCC
Confidence 2 2356899986 599999999999999999999999884
|
|
| >TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-39 Score=291.59 Aligned_cols=294 Identities=26% Similarity=0.340 Sum_probs=220.7
Q ss_pred EEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--CCCC
Q 019795 7 ILVTGGAGFIGTHCALQLLQGGF-KVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS--QKFE 83 (335)
Q Consensus 7 vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~--~~~d 83 (335)
|||||||||||++|++.|.++|+ +|++++|..... .+... ....+..|+++.+.++.+.+. .++|
T Consensus 1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~-----~~~~~-------~~~~~~~d~~~~~~~~~~~~~~~~~~D 68 (314)
T TIGR02197 1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGH-----KFLNL-------ADLVIADYIDKEDFLDRLEKGAFGKIE 68 (314)
T ss_pred CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCch-----hhhhh-------hheeeeccCcchhHHHHHHhhccCCCC
Confidence 69999999999999999999997 788887754321 11110 113466788888777776642 4799
Q ss_pred EEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccCCCCCCCccCCCC-CCCCChhHHhHHH
Q 019795 84 AVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQPEKIPCVEDFP-YGAMNPYGRTKQW 162 (335)
Q Consensus 84 ~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~-~~~~~~Y~~sK~~ 162 (335)
+|||+|+.... ...++...+++|+.++.+++++|++.++ ++|++||+++||.... +.+|+++ ..|.+.|+.+|..
T Consensus 69 ~vvh~A~~~~~--~~~~~~~~~~~n~~~~~~ll~~~~~~~~-~~v~~SS~~vy~~~~~-~~~e~~~~~~p~~~Y~~sK~~ 144 (314)
T TIGR02197 69 AIFHQGACSDT--TETDGEYMMENNYQYSKRLLDWCAEKGI-PFIYASSAATYGDGEA-GFREGRELERPLNVYGYSKFL 144 (314)
T ss_pred EEEECccccCc--cccchHHHHHHHHHHHHHHHHHHHHhCC-cEEEEccHHhcCCCCC-CcccccCcCCCCCHHHHHHHH
Confidence 99999997432 3456678899999999999999999886 8999999999987543 4556554 4588899999999
Q ss_pred HHHHHHHHHhh-CCCCeEEEEecccccCCCCCCCCCCCCCCCCCChH-HHHHHHHhCCCCceeEecccCCCCCCceeeee
Q 019795 163 CEEIAFDVQKA-DPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLM-PYIQQVAVGRHPELNVYGQDYPTKDGSAVRDY 240 (335)
Q Consensus 163 ~E~~~~~~~~~-~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 240 (335)
+|.+++++..+ ..+++++++||+++||++.... .. ...++ .++..+..+.. +.+++......+|.+.++|
T Consensus 145 ~e~~~~~~~~~~~~~~~~~~lR~~~vyG~~~~~~-----~~-~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~g~~~~~~ 216 (314)
T TIGR02197 145 FDQYVRRRVLPEALSAQVVGLRYFNVYGPREYHK-----GK-MASVAFHLFNQIKAGGN--VKLFKSSEGFKDGEQLRDF 216 (314)
T ss_pred HHHHHHHHhHhhccCCceEEEEEeeccCCCCCCC-----CC-cccHHHHHHHHHhcCCC--eEEecCccccCCCCceeee
Confidence 99999875432 3367899999999999853310 11 12233 34555555554 4555432223368889999
Q ss_pred eeHhhhhc---------cCceEEecCCccccHHHHHHHHHHHhCCCCCceeCCCCCC----ccceeeccHHHHHHhcCCc
Q 019795 241 IHVMDLAD---------GCIAYNLGNGKGISVLEMVAAFEKASGKKIPIKFCPRRVG----DATAVYAATDKAHKELGWK 307 (335)
Q Consensus 241 v~~~D~~~---------~~~~~nv~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~----~~~~~~~d~~k~~~~Lg~~ 307 (335)
+|++|+++ .+++||+++++++|++|+++.+.+.+|.+..+...+.+.. ......+|++|+++.|||+
T Consensus 217 i~v~D~a~~i~~~~~~~~~~~yni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~l~~~ 296 (314)
T TIGR02197 217 VYVKDVVDVNLWLLENGVSGIFNLGTGRARSFNDLADAVFKALGKDEKIEYIPMPEALRGKYQYFTQADITKLRAAGYYG 296 (314)
T ss_pred EEHHHHHHHHHHHHhcccCceEEcCCCCCccHHHHHHHHHHHhCCCCcceeccCccccccccccccccchHHHHHhcCCC
Confidence 99999997 3679999999999999999999999997754443332221 1234578999999999999
Q ss_pred cccCHHHHHHHHHHHHh
Q 019795 308 PKYGIEDMCAHQWNWAK 324 (335)
Q Consensus 308 p~~~~~~~~~~~~~~~~ 324 (335)
|+++++++++++++|++
T Consensus 297 p~~~l~~~l~~~~~~~~ 313 (314)
T TIGR02197 297 PFTTLEEGVKDYVQWLL 313 (314)
T ss_pred CcccHHHHHHHHHHHHh
Confidence 99999999999999985
|
This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370). |
| >PLN02650 dihydroflavonol-4-reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-39 Score=297.14 Aligned_cols=298 Identities=21% Similarity=0.296 Sum_probs=216.4
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCCC
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKFE 83 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~d 83 (335)
.|+|||||||||||++|+++|+++|++|++++|+..........+ ...+ ....+.++.+|++|.+.+.++++ ++|
T Consensus 5 ~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~-~~~~--~~~~~~~v~~Dl~d~~~~~~~~~--~~d 79 (351)
T PLN02650 5 KETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLL-DLPG--ATTRLTLWKADLAVEGSFDDAIR--GCT 79 (351)
T ss_pred CCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHHHH-hccC--CCCceEEEEecCCChhhHHHHHh--CCC
Confidence 578999999999999999999999999999998755433222111 1100 01357889999999999999998 789
Q ss_pred EEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcC-CCEEEEeccccccCCC-CCCC-ccCCCC---------CC
Q 019795 84 AVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYN-CKKLVFSSSATIYGQP-EKIP-CVEDFP---------YG 151 (335)
Q Consensus 84 ~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~v~~Ss~~vyg~~-~~~~-~~e~~~---------~~ 151 (335)
+|||+|+..... ........+++|+.++.+++++|++.+ +++||++||.++|+.. ...+ ++|+.. ..
T Consensus 80 ~ViH~A~~~~~~-~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~r~v~~SS~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~ 158 (351)
T PLN02650 80 GVFHVATPMDFE-SKDPENEVIKPTVNGMLSIMKACAKAKTVRRIVFTSSAGTVNVEEHQKPVYDEDCWSDLDFCRRKKM 158 (351)
T ss_pred EEEEeCCCCCCC-CCCchhhhhhHHHHHHHHHHHHHHhcCCceEEEEecchhhcccCCCCCCccCcccCCchhhhhcccc
Confidence 999999874321 112234788999999999999999876 7899999998777643 2223 456532 12
Q ss_pred CCChhHHhHHHHHHHHHHHHhhCCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHHHhCCCCceeEecccCCC
Q 019795 152 AMNPYGRTKQWCEEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPT 231 (335)
Q Consensus 152 ~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 231 (335)
|.++|+.||..+|.+++.+.+++ +++++++||+++|||.... .....++..+. ...+... .++
T Consensus 159 ~~~~Y~~sK~~~E~~~~~~~~~~-gi~~~ilRp~~v~Gp~~~~-------~~~~~~~~~~~-~~~~~~~---~~~----- 221 (351)
T PLN02650 159 TGWMYFVSKTLAEKAAWKYAAEN-GLDFISIIPTLVVGPFIST-------SMPPSLITALS-LITGNEA---HYS----- 221 (351)
T ss_pred ccchHHHHHHHHHHHHHHHHHHc-CCeEEEECCCceECCCCCC-------CCCccHHHHHH-HhcCCcc---ccC-----
Confidence 44689999999999999998887 9999999999999996431 11222333221 1223222 111
Q ss_pred CCCceeeeeeeHhhhhc----------cCceEEecCCccccHHHHHHHHHHHhCCC-CCceeCCCCCCccceeeccHHHH
Q 019795 232 KDGSAVRDYIHVMDLAD----------GCIAYNLGNGKGISVLEMVAAFEKASGKK-IPIKFCPRRVGDATAVYAATDKA 300 (335)
Q Consensus 232 ~~~~~~~~~v~~~D~~~----------~~~~~nv~~~~~~s~~el~~~i~~~~g~~-~~~~~~~~~~~~~~~~~~d~~k~ 300 (335)
....++|+|++|+++ .++.| +++++.+|+.|+++.|.+.++.. .+.. .+....+......|++|+
T Consensus 222 --~~~~r~~v~V~Dva~a~~~~l~~~~~~~~~-i~~~~~~s~~el~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~d~~k~ 297 (351)
T PLN02650 222 --IIKQGQFVHLDDLCNAHIFLFEHPAAEGRY-ICSSHDATIHDLAKMLREKYPEYNIPAR-FPGIDEDLKSVEFSSKKL 297 (351)
T ss_pred --cCCCcceeeHHHHHHHHHHHhcCcCcCceE-EecCCCcCHHHHHHHHHHhCcccCCCCC-CCCcCcccccccCChHHH
Confidence 123479999999998 24578 56778899999999999987622 2211 122223445566799998
Q ss_pred HHhcCCccccCHHHHHHHHHHHHhcCCCC
Q 019795 301 HKELGWKPKYGIEDMCAHQWNWAKNNPMG 329 (335)
Q Consensus 301 ~~~Lg~~p~~~~~~~~~~~~~~~~~~~~~ 329 (335)
+.|||+|+++++++|+++++|+++.+..
T Consensus 298 -~~lG~~p~~~l~egl~~~i~~~~~~~~~ 325 (351)
T PLN02650 298 -TDLGFTFKYSLEDMFDGAIETCREKGLI 325 (351)
T ss_pred -HHhCCCCCCCHHHHHHHHHHHHHHcCCC
Confidence 5899999999999999999999987643
|
|
| >COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-39 Score=290.39 Aligned_cols=293 Identities=34% Similarity=0.538 Sum_probs=236.3
Q ss_pred eEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCC-CE
Q 019795 6 NILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKF-EA 84 (335)
Q Consensus 6 ~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~-d~ 84 (335)
+|||||||||||++|+++|.++|++|++++|...+..... ..+.++.+|++|.+.+.++.+ .. |+
T Consensus 2 ~ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~------------~~~~~~~~d~~~~~~~~~~~~--~~~d~ 67 (314)
T COG0451 2 RILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLL------------SGVEFVVLDLTDRDLVDELAK--GVPDA 67 (314)
T ss_pred eEEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCccccccc------------cccceeeecccchHHHHHHHh--cCCCE
Confidence 4999999999999999999999999999999766543211 257889999999888888887 44 99
Q ss_pred EEEcccccchhhhhc-ChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccCCC-CCCCccCC-CCCCCCChhHHhHH
Q 019795 85 VIHFGALKAVAESVQ-HPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQP-EKIPCVED-FPYGAMNPYGRTKQ 161 (335)
Q Consensus 85 vi~~a~~~~~~~~~~-~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~-~~~~~~e~-~~~~~~~~Y~~sK~ 161 (335)
|||+|+......... ++...+++|+.++.+++++|++.+++++|+.||.++|+.. ...+++|+ .+..|.++|+.+|.
T Consensus 68 vih~aa~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~~~~v~~ss~~~~~~~~~~~~~~E~~~~~~p~~~Yg~sK~ 147 (314)
T COG0451 68 VIHLAAQSSVPDSNASDPAEFLDVNVDGTLNLLEAARAAGVKRFVFASSVSVVYGDPPPLPIDEDLGPPRPLNPYGVSKL 147 (314)
T ss_pred EEEccccCchhhhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCCCceECCCCCCCCcccccCCCCCCCHHHHHHH
Confidence 999999876554433 4667999999999999999999889999998887877765 33478888 68888889999999
Q ss_pred HHHHHHHHHHhhCCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHH-HHHHHHhCCCCceeEecccCCCCCCceeeee
Q 019795 162 WCEEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMP-YIQQVAVGRHPELNVYGQDYPTKDGSAVRDY 240 (335)
Q Consensus 162 ~~E~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 240 (335)
++|+.++.+...+ +++++++||++|||++.... ....+.. ++.....+... +...+ ++...++|
T Consensus 148 ~~E~~~~~~~~~~-~~~~~ilR~~~vyGp~~~~~-------~~~~~~~~~~~~~~~~~~~-~~~~~------~~~~~~~~ 212 (314)
T COG0451 148 AAEQLLRAYARLY-GLPVVILRPFNVYGPGDKPD-------LSSGVVSAFIRQLLKGEPI-IVIGG------DGSQTRDF 212 (314)
T ss_pred HHHHHHHHHHHHh-CCCeEEEeeeeeeCCCCCCC-------CCcCcHHHHHHHHHhCCCc-ceEeC------CCceeEee
Confidence 9999999998855 89999999999999965422 1222333 34444555542 45555 67888999
Q ss_pred eeHhhhhc---------cCceEEecCCc-cccHHHHHHHHHHHhCCCCC-ceeCC--CCCCccceeeccHHHHHHhcCCc
Q 019795 241 IHVMDLAD---------GCIAYNLGNGK-GISVLEMVAAFEKASGKKIP-IKFCP--RRVGDATAVYAATDKAHKELGWK 307 (335)
Q Consensus 241 v~~~D~~~---------~~~~~nv~~~~-~~s~~el~~~i~~~~g~~~~-~~~~~--~~~~~~~~~~~d~~k~~~~Lg~~ 307 (335)
+|++|+++ ...+||++++. ..|+.|+++.+.+.+|.+.+ +...+ ..........+|.+|+++.|||.
T Consensus 213 i~v~D~a~~~~~~~~~~~~~~~ni~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~ 292 (314)
T COG0451 213 VYVDDVADALLLALENPDGGVFNIGSGTAEITVRELAEAVAEAVGSKAPLIVYIPLGRRGDLREGKLLDISKARAALGWE 292 (314)
T ss_pred EeHHHHHHHHHHHHhCCCCcEEEeCCCCCcEEHHHHHHHHHHHhCCCCcceeecCCCCCCcccccccCCHHHHHHHhCCC
Confidence 99999987 11199999997 89999999999999998866 44444 24444567789999999999999
Q ss_pred cccCHHHHHHHHHHHHhcCC
Q 019795 308 PKYGIEDMCAHQWNWAKNNP 327 (335)
Q Consensus 308 p~~~~~~~~~~~~~~~~~~~ 327 (335)
|++++++++.++++|+....
T Consensus 293 p~~~~~~~i~~~~~~~~~~~ 312 (314)
T COG0451 293 PKVSLEEGLADTLEWLLKKL 312 (314)
T ss_pred CCCCHHHHHHHHHHHHHHhh
Confidence 99999999999999998754
|
|
| >PLN02986 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-38 Score=287.18 Aligned_cols=292 Identities=20% Similarity=0.243 Sum_probs=214.7
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCC
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKF 82 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~ 82 (335)
.+|+|||||||||||++++++|+++|++|+++.|+....... ..+....+ ....+.++.+|++|.+.+.++++ ++
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~--~~~~~~~~~~Dl~~~~~~~~~~~--~~ 78 (322)
T PLN02986 4 GGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKT-EHLLALDG--AKERLKLFKADLLEESSFEQAIE--GC 78 (322)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHH-HHHHhccC--CCCceEEEecCCCCcchHHHHHh--CC
Confidence 458999999999999999999999999999998876543322 11211110 11468899999999999999998 79
Q ss_pred CEEEEcccccchhhhhcCh-HHHHHHhHHHHHHHHHHHHHc-CCCEEEEecccccc--CCC---CCCCccCCCCCC----
Q 019795 83 EAVIHFGALKAVAESVQHP-FRYFDNNLIGTINLYQAMAKY-NCKKLVFSSSATIY--GQP---EKIPCVEDFPYG---- 151 (335)
Q Consensus 83 d~vi~~a~~~~~~~~~~~~-~~~~~~nv~~~~~l~~~~~~~-~~~~~v~~Ss~~vy--g~~---~~~~~~e~~~~~---- 151 (335)
|+|||+|+.... ...++ ...++.|+.++.+++++|++. ++++||++||.++| +.. ...+++|+.+..
T Consensus 79 d~vih~A~~~~~--~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~rvV~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~ 156 (322)
T PLN02986 79 DAVFHTASPVFF--TVKDPQTELIDPALKGTINVLNTCKETPSVKRVILTSSTAAVLFRQPPIEANDVVDETFFSDPSLC 156 (322)
T ss_pred CEEEEeCCCcCC--CCCCchhhhhHHHHHHHHHHHHHHHhcCCccEEEEecchhheecCCccCCCCCCcCcccCCChHHh
Confidence 999999997432 12222 357899999999999999885 68999999998754 432 234567776443
Q ss_pred --CCChhHHhHHHHHHHHHHHHhhCCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHHHhCCCCceeEecccC
Q 019795 152 --AMNPYGRTKQWCEEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDY 229 (335)
Q Consensus 152 --~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 229 (335)
+.+.|+.||.++|.+++.+.+++ +++++++||++||||..... .......+.....+.. + +
T Consensus 157 ~~~~~~Y~~sK~~aE~~~~~~~~~~-~~~~~~lrp~~v~Gp~~~~~--------~~~~~~~~~~~~~g~~--~--~---- 219 (322)
T PLN02986 157 RETKNWYPLSKILAENAAWEFAKDN-GIDMVVLNPGFICGPLLQPT--------LNFSVELIVDFINGKN--L--F---- 219 (322)
T ss_pred hccccchHHHHHHHHHHHHHHHHHh-CCeEEEEcccceeCCCCCCC--------CCccHHHHHHHHcCCC--C--C----
Confidence 35779999999999999998887 99999999999999953211 0111233444444432 1 2
Q ss_pred CCCCCceeeeeeeHhhhhc----------cCceEEecCCccccHHHHHHHHHHHhCCCCCceeCCCCCCccce--eeccH
Q 019795 230 PTKDGSAVRDYIHVMDLAD----------GCIAYNLGNGKGISVLEMVAAFEKASGKKIPIKFCPRRVGDATA--VYAAT 297 (335)
Q Consensus 230 ~~~~~~~~~~~v~~~D~~~----------~~~~~nv~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~--~~~d~ 297 (335)
+.+.++|||++|+|+ .++.||+ +++.+|+.|+++.+.+.++. ..+... ....+... ..+|+
T Consensus 220 ----~~~~~~~v~v~Dva~a~~~al~~~~~~~~yni-~~~~~s~~e~~~~i~~~~~~-~~~~~~-~~~~~~~~~~~~~d~ 292 (322)
T PLN02986 220 ----NNRFYRFVDVRDVALAHIKALETPSANGRYII-DGPIMSVNDIIDILRELFPD-LCIADT-NEESEMNEMICKVCV 292 (322)
T ss_pred ----CCcCcceeEHHHHHHHHHHHhcCcccCCcEEE-ecCCCCHHHHHHHHHHHCCC-CCCCCC-CccccccccCCccCH
Confidence 235689999999997 3468999 56789999999999999873 221111 11112222 24899
Q ss_pred HHHHHhcCCccccCHHHHHHHHHHHHhcCC
Q 019795 298 DKAHKELGWKPKYGIEDMCAHQWNWAKNNP 327 (335)
Q Consensus 298 ~k~~~~Lg~~p~~~~~~~~~~~~~~~~~~~ 327 (335)
+|++ .|||+|+ +++++|+++++|+++.+
T Consensus 293 ~~~~-~lg~~~~-~l~e~~~~~~~~~~~~~ 320 (322)
T PLN02986 293 EKVK-NLGVEFT-PMKSSLRDTILSLKEKC 320 (322)
T ss_pred HHHH-HcCCccc-CHHHHHHHHHHHHHHcC
Confidence 9995 5999998 99999999999999865
|
|
| >COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-39 Score=269.61 Aligned_cols=309 Identities=23% Similarity=0.304 Sum_probs=260.1
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCC
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKF 82 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~ 82 (335)
++|++||||-||+-|++|++.|++.||+|+++.|..++.....-.+.+.. ....+++.++.+|++|...+.++++...|
T Consensus 1 ~~K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri~L~~~~-~~~~~~l~l~~gDLtD~~~l~r~l~~v~P 79 (345)
T COG1089 1 MGKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDP-HLNDPRLHLHYGDLTDSSNLLRILEEVQP 79 (345)
T ss_pred CCceEEEecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccceecccc-ccCCceeEEEeccccchHHHHHHHHhcCc
Confidence 57999999999999999999999999999999887554333221222221 22235699999999999999999999999
Q ss_pred CEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCC--CEEEEeccccccCCCCCCCccCCCCCCCCChhHHhH
Q 019795 83 EAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNC--KKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTK 160 (335)
Q Consensus 83 d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~--~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~Y~~sK 160 (335)
|.|+|+|+..++..+.+.|+.+.+++-.|+.+++++.+..+. .+|...||+..||.....|.+|..|..|.++|+.+|
T Consensus 80 dEIYNLaAQS~V~vSFe~P~~T~~~~~iGtlrlLEaiR~~~~~~~rfYQAStSE~fG~v~~~pq~E~TPFyPrSPYAvAK 159 (345)
T COG1089 80 DEIYNLAAQSHVGVSFEQPEYTADVDAIGTLRLLEAIRILGEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAK 159 (345)
T ss_pred hhheeccccccccccccCcceeeeechhHHHHHHHHHHHhCCcccEEEecccHHhhcCcccCccccCCCCCCCCHHHHHH
Confidence 999999999999999999999999999999999999998754 489999999999999899999999999999999999
Q ss_pred HHHHHHHHHHHhhCCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHHHhCCCCceeEecccCCCCCCceeeee
Q 019795 161 QWCEEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAVRDY 240 (335)
Q Consensus 161 ~~~E~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 240 (335)
..+-++...|.+.+ |+-.+.-+.+| |+++..|+. ...+.+...+.++..|.+.. ...| +-+..|||
T Consensus 160 lYa~W~tvNYResY-gl~AcnGILFN----HESP~Rge~--FVTRKIt~ava~Ik~G~q~~-l~lG------NldAkRDW 225 (345)
T COG1089 160 LYAYWITVNYRESY-GLFACNGILFN----HESPLRGET--FVTRKITRAVARIKLGLQDK-LYLG------NLDAKRDW 225 (345)
T ss_pred HHHHheeeehHhhc-Cceeecceeec----CCCCCCccc--eehHHHHHHHHHHHccccce-EEec------cccccccc
Confidence 99999999999988 88777766665 555444443 34667778889999998874 4567 56788999
Q ss_pred eeHhhhhc---------cCceEEecCCccccHHHHHHHHHHHhCCCCCc-------------------eeCC--CCCCcc
Q 019795 241 IHVMDLAD---------GCIAYNLGNGKGISVLEMVAAFEKASGKKIPI-------------------KFCP--RRVGDA 290 (335)
Q Consensus 241 v~~~D~~~---------~~~~~nv~~~~~~s~~el~~~i~~~~g~~~~~-------------------~~~~--~~~~~~ 290 (335)
=|+.|-++ .++.|++++|+..|++|+++...+..|.+... .+.| .+|.+.
T Consensus 226 G~A~DYVe~mwlmLQq~~PddyViATg~t~sVrefv~~Af~~~g~~l~w~g~g~~e~g~da~~G~~~V~idp~~fRPaEV 305 (345)
T COG1089 226 GHAKDYVEAMWLMLQQEEPDDYVIATGETHSVREFVELAFEMVGIDLEWEGTGVDEKGVDAKTGKIIVEIDPRYFRPAEV 305 (345)
T ss_pred cchHHHHHHHHHHHccCCCCceEEecCceeeHHHHHHHHHHHcCceEEEeeccccccccccccCceeEEECccccCchhh
Confidence 99999987 58899999999999999999999999955432 1122 366777
Q ss_pred ceeeccHHHHHHhcCCccccCHHHHHHHHHHHHhcC
Q 019795 291 TAVYAATDKAHKELGWKPKYGIEDMCAHQWNWAKNN 326 (335)
Q Consensus 291 ~~~~~d~~k~~~~Lg~~p~~~~~~~~~~~~~~~~~~ 326 (335)
+-+..|++|+++.|||+|++++++.+++++++-.+.
T Consensus 306 ~~Llgdp~KA~~~LGW~~~~~~~elv~~Mv~~dl~~ 341 (345)
T COG1089 306 DLLLGDPTKAKEKLGWRPEVSLEELVREMVEADLEA 341 (345)
T ss_pred hhhcCCHHHHHHHcCCccccCHHHHHHHHHHHHHHH
Confidence 888999999999999999999999999999986653
|
|
| >TIGR03466 HpnA hopanoid-associated sugar epimerase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-38 Score=283.41 Aligned_cols=286 Identities=23% Similarity=0.384 Sum_probs=223.4
Q ss_pred CeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCCCE
Q 019795 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKFEA 84 (335)
Q Consensus 5 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~d~ 84 (335)
|+|+||||+||||+++++.|+++|++|++++|++...... . ..++.++.+|++|.+++.++++ ++|+
T Consensus 1 ~~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~-------~~~~~~~~~D~~~~~~l~~~~~--~~d~ 67 (328)
T TIGR03466 1 MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRNL----E-------GLDVEIVEGDLRDPASLRKAVA--GCRA 67 (328)
T ss_pred CeEEEECCccchhHHHHHHHHHCCCEEEEEEecCcccccc----c-------cCCceEEEeeCCCHHHHHHHHh--CCCE
Confidence 4799999999999999999999999999999975542111 0 1368899999999999999998 7899
Q ss_pred EEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccCC-CCCCCccCCCCCCC---CChhHHhH
Q 019795 85 VIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQ-PEKIPCVEDFPYGA---MNPYGRTK 160 (335)
Q Consensus 85 vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~-~~~~~~~e~~~~~~---~~~Y~~sK 160 (335)
|||+|+.... ...+++..+++|+.++.++++++++.+++++|++||.++||. ....+.+|+.+..+ .+.|+.+|
T Consensus 68 vi~~a~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK 145 (328)
T TIGR03466 68 LFHVAADYRL--WAPDPEEMYAANVEGTRNLLRAALEAGVERVVYTSSVATLGVRGDGTPADETTPSSLDDMIGHYKRSK 145 (328)
T ss_pred EEEeceeccc--CCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEechhhcCcCCCCCCcCccCCCCcccccChHHHHH
Confidence 9999986321 234567889999999999999999988899999999999985 34457888877665 45799999
Q ss_pred HHHHHHHHHHHhhCCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHHHhCCCCceeEecccCCCCCCceeeee
Q 019795 161 QWCEEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAVRDY 240 (335)
Q Consensus 161 ~~~E~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 240 (335)
.++|++++.+..++ +++++++||+++||++... .......+...+.+..+ ... ....+|
T Consensus 146 ~~~e~~~~~~~~~~-~~~~~ilR~~~~~G~~~~~---------~~~~~~~~~~~~~~~~~---~~~--------~~~~~~ 204 (328)
T TIGR03466 146 FLAEQAALEMAAEK-GLPVVIVNPSTPIGPRDIK---------PTPTGRIIVDFLNGKMP---AYV--------DTGLNL 204 (328)
T ss_pred HHHHHHHHHHHHhc-CCCEEEEeCCccCCCCCCC---------CCcHHHHHHHHHcCCCc---eee--------CCCcce
Confidence 99999999988776 8999999999999985321 11112234444444433 221 123689
Q ss_pred eeHhhhhc----------cCceEEecCCccccHHHHHHHHHHHhCCCCCceeCCCC-------------------CCc--
Q 019795 241 IHVMDLAD----------GCIAYNLGNGKGISVLEMVAAFEKASGKKIPIKFCPRR-------------------VGD-- 289 (335)
Q Consensus 241 v~~~D~~~----------~~~~~nv~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~-------------------~~~-- 289 (335)
+|++|+++ .++.||++ ++.+|+.|+++.+.+.+|.+.+....|.. +..
T Consensus 205 i~v~D~a~a~~~~~~~~~~~~~~~~~-~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (328)
T TIGR03466 205 VHVDDVAEGHLLALERGRIGERYILG-GENLTLKQILDKLAEITGRPAPRVKLPRWLLLPVAWGAEALARLTGKEPRVTV 283 (328)
T ss_pred EEHHHHHHHHHHHHhCCCCCceEEec-CCCcCHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHHHHHHHHHhcCCCCCCCH
Confidence 99999997 36678874 78899999999999999976544433311 100
Q ss_pred ------cceeeccHHHHHHhcCCccccCHHHHHHHHHHHHhcCCC
Q 019795 290 ------ATAVYAATDKAHKELGWKPKYGIEDMCAHQWNWAKNNPM 328 (335)
Q Consensus 290 ------~~~~~~d~~k~~~~Lg~~p~~~~~~~~~~~~~~~~~~~~ 328 (335)
.....+|++|+++.|||+|+ +++++++++++|++++++
T Consensus 284 ~~~~~~~~~~~~d~~k~~~~lg~~p~-~~~~~i~~~~~~~~~~~~ 327 (328)
T TIGR03466 284 DGVRMAKKKMFFSSAKAVRELGYRQR-PAREALRDAVEWFRANGY 327 (328)
T ss_pred HHHHHHhccCCCChHHHHHHcCCCCc-CHHHHHHHHHHHHHHhCC
Confidence 12557899999999999997 999999999999998754
|
The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene. |
| >PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-38 Score=280.08 Aligned_cols=265 Identities=24% Similarity=0.273 Sum_probs=200.5
Q ss_pred CeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCCCE
Q 019795 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKFEA 84 (335)
Q Consensus 5 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~d~ 84 (335)
|+|||||++|+||++|.++|.++|++|++++|. ..|+.|.+.+.++++..+||+
T Consensus 1 MriLI~GasG~lG~~l~~~l~~~~~~v~~~~r~--------------------------~~dl~d~~~~~~~~~~~~pd~ 54 (286)
T PF04321_consen 1 MRILITGASGFLGSALARALKERGYEVIATSRS--------------------------DLDLTDPEAVAKLLEAFKPDV 54 (286)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTTSEEEEEESTT--------------------------CS-TTSHHHHHHHHHHH--SE
T ss_pred CEEEEECCCCHHHHHHHHHHhhCCCEEEEeCch--------------------------hcCCCCHHHHHHHHHHhCCCe
Confidence 699999999999999999999999999998763 458999999999999888999
Q ss_pred EEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccCCCCCCCccCCCCCCCCChhHHhHHHHH
Q 019795 85 VIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQWCE 164 (335)
Q Consensus 85 vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~Y~~sK~~~E 164 (335)
|||||+...+..+..+++..+++|+.++.+++++|.+.+. ++||+||..||+.....+++|+++..|.+.||.+|.++|
T Consensus 55 Vin~aa~~~~~~ce~~p~~a~~iN~~~~~~la~~~~~~~~-~li~~STd~VFdG~~~~~y~E~d~~~P~~~YG~~K~~~E 133 (286)
T PF04321_consen 55 VINCAAYTNVDACEKNPEEAYAINVDATKNLAEACKERGA-RLIHISTDYVFDGDKGGPYTEDDPPNPLNVYGRSKLEGE 133 (286)
T ss_dssp EEE------HHHHHHSHHHHHHHHTHHHHHHHHHHHHCT--EEEEEEEGGGS-SSTSSSB-TTS----SSHHHHHHHHHH
T ss_pred EeccceeecHHhhhhChhhhHHHhhHHHHHHHHHHHHcCC-cEEEeeccEEEcCCcccccccCCCCCCCCHHHHHHHHHH
Confidence 9999999888888999999999999999999999999985 999999999998777788999999999999999999999
Q ss_pred HHHHHHHhhCCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHHHhCCCCceeEecccCCCCCCceeeeeeeHh
Q 019795 165 EIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAVRDYIHVM 244 (335)
Q Consensus 165 ~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~v~~~ 244 (335)
+.+++. .-+.+++|++.+||++ ...++..+...+..+.+ +.+. .+..++.+|++
T Consensus 134 ~~v~~~-----~~~~~IlR~~~~~g~~------------~~~~~~~~~~~~~~~~~-i~~~--------~d~~~~p~~~~ 187 (286)
T PF04321_consen 134 QAVRAA-----CPNALILRTSWVYGPS------------GRNFLRWLLRRLRQGEP-IKLF--------DDQYRSPTYVD 187 (286)
T ss_dssp HHHHHH------SSEEEEEE-SEESSS------------SSSHHHHHHHHHHCTSE-EEEE--------SSCEE--EEHH
T ss_pred HHHHHh-----cCCEEEEecceecccC------------CCchhhhHHHHHhcCCe-eEee--------CCceeCCEEHH
Confidence 999874 3378999999999983 33477777666665555 6664 35678999999
Q ss_pred hhhc---------c-----CceEEecCCccccHHHHHHHHHHHhCCCC-CceeCC-----CCCCccceeeccHHHHHHhc
Q 019795 245 DLAD---------G-----CIAYNLGNGKGISVLEMVAAFEKASGKKI-PIKFCP-----RRVGDATAVYAATDKAHKEL 304 (335)
Q Consensus 245 D~~~---------~-----~~~~nv~~~~~~s~~el~~~i~~~~g~~~-~~~~~~-----~~~~~~~~~~~d~~k~~~~L 304 (335)
|+|+ . .++||+++++.+|+.|+++.+.+.+|.+. .+...+ .....+.+..+|++|+++.|
T Consensus 188 dlA~~i~~l~~~~~~~~~~~Giyh~~~~~~~S~~e~~~~i~~~~~~~~~~i~~~~~~~~~~~~~rp~~~~L~~~kl~~~~ 267 (286)
T PF04321_consen 188 DLARVILELIEKNLSGASPWGIYHLSGPERVSRYEFAEAIAKILGLDPELIKPVSSSEFPRAAPRPRNTSLDCRKLKNLL 267 (286)
T ss_dssp HHHHHHHHHHHHHHH-GGG-EEEE---BS-EEHHHHHHHHHHHHTHCTTEEEEESSTTSTTSSGS-SBE-B--HHHHHCT
T ss_pred HHHHHHHHHHHhcccccccceeEEEecCcccCHHHHHHHHHHHhCCCCceEEecccccCCCCCCCCCcccccHHHHHHcc
Confidence 9998 2 48999999999999999999999999776 333322 22334568899999999999
Q ss_pred CCccccCHHHHHHHHHHHH
Q 019795 305 GWKPKYGIEDMCAHQWNWA 323 (335)
Q Consensus 305 g~~p~~~~~~~~~~~~~~~ 323 (335)
|+++. +|+++|+++++.+
T Consensus 268 g~~~~-~~~~~l~~~~~~~ 285 (286)
T PF04321_consen 268 GIKPP-PWREGLEELVKQY 285 (286)
T ss_dssp TS----BHHHHHHHHHHHH
T ss_pred CCCCc-CHHHHHHHHHHHh
Confidence 99998 9999999998865
|
1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. |
| >TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-38 Score=282.91 Aligned_cols=268 Identities=24% Similarity=0.345 Sum_probs=209.8
Q ss_pred CCCCCeEEEEcCCChhhHHHHHHHHhCC--CeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHh
Q 019795 1 MASEKNILVTGGAGFIGTHCALQLLQGG--FKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFS 78 (335)
Q Consensus 1 ~~~~~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~ 78 (335)
|+++|+||||||+||||++++++|+++| ++|++++|+..........+ . ..++.++.+|++|.+++.++++
T Consensus 1 ~~~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~----~---~~~~~~v~~Dl~d~~~l~~~~~ 73 (324)
T TIGR03589 1 MFNNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKF----P---APCLRFFIGDVRDKERLTRALR 73 (324)
T ss_pred CcCCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHh----C---CCcEEEEEccCCCHHHHHHHHh
Confidence 6789999999999999999999999986 78999988644322111111 1 1468899999999999999998
Q ss_pred cCCCCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccCCCCCCCccCCCCCCCCChhHH
Q 019795 79 SQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGR 158 (335)
Q Consensus 79 ~~~~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~Y~~ 158 (335)
++|+|||+|+.........++..++++|+.|+.+++++|++.+++++|++||.. +..|.++|+.
T Consensus 74 --~iD~Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~aa~~~~~~~iV~~SS~~--------------~~~p~~~Y~~ 137 (324)
T TIGR03589 74 --GVDYVVHAAALKQVPAAEYNPFECIRTNINGAQNVIDAAIDNGVKRVVALSTDK--------------AANPINLYGA 137 (324)
T ss_pred --cCCEEEECcccCCCchhhcCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeCCC--------------CCCCCCHHHH
Confidence 799999999975444445567789999999999999999998888999999953 2345678999
Q ss_pred hHHHHHHHHHHHHh---hCCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHHHhCCCCceeEecccCCCCCCc
Q 019795 159 TKQWCEEIAFDVQK---ADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGS 235 (335)
Q Consensus 159 sK~~~E~~~~~~~~---~~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 235 (335)
+|..+|.+++.++. .. +++++++||++|||+.. .+++.+.+.+..+.+.+++. ++.
T Consensus 138 sK~~~E~l~~~~~~~~~~~-gi~~~~lR~g~v~G~~~-------------~~i~~~~~~~~~~~~~~~i~-------~~~ 196 (324)
T TIGR03589 138 TKLASDKLFVAANNISGSK-GTRFSVVRYGNVVGSRG-------------SVVPFFKSLKEEGVTELPIT-------DPR 196 (324)
T ss_pred HHHHHHHHHHHHHhhcccc-CcEEEEEeecceeCCCC-------------CcHHHHHHHHHhCCCCeeeC-------CCC
Confidence 99999999987543 34 89999999999999831 25666666555443225553 467
Q ss_pred eeeeeeeHhhhhc----------cCceEEecCCccccHHHHHHHHHHHhCCCCCceeCCCCCCcc-ceeeccHHHHHHhc
Q 019795 236 AVRDYIHVMDLAD----------GCIAYNLGNGKGISVLEMVAAFEKASGKKIPIKFCPRRVGDA-TAVYAATDKAHKEL 304 (335)
Q Consensus 236 ~~~~~v~~~D~~~----------~~~~~nv~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~-~~~~~d~~k~~~~L 304 (335)
+.++|+|++|+++ .+++| ++++..+++.|+++.+.+..+ +...+.++.+. ....+|++|+++.|
T Consensus 197 ~~r~~i~v~D~a~a~~~al~~~~~~~~~-~~~~~~~sv~el~~~i~~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~l 271 (324)
T TIGR03589 197 MTRFWITLEQGVNFVLKSLERMLGGEIF-VPKIPSMKITDLAEAMAPECP----HKIVGIRPGEKLHEVMITEDDARHTY 271 (324)
T ss_pred ceEeeEEHHHHHHHHHHHHhhCCCCCEE-ccCCCcEEHHHHHHHHHhhCC----eeEeCCCCCchhHhhhcChhhhhhhc
Confidence 8899999999987 35678 567778999999999999643 33344455543 44668999999999
Q ss_pred CCccccCHHHHHH
Q 019795 305 GWKPKYGIEDMCA 317 (335)
Q Consensus 305 g~~p~~~~~~~~~ 317 (335)
||+|++++++++.
T Consensus 272 g~~~~~~l~~~~~ 284 (324)
T TIGR03589 272 ELGDYYAILPSIS 284 (324)
T ss_pred CCCCeEEEccccc
Confidence 9999999999985
|
This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family. |
| >TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-37 Score=275.62 Aligned_cols=263 Identities=23% Similarity=0.242 Sum_probs=211.0
Q ss_pred eEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCCCEE
Q 019795 6 NILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKFEAV 85 (335)
Q Consensus 6 ~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~d~v 85 (335)
+|||||||||||+++++.|+++|++|++++|+ .+|+.|.+++.++++...+|+|
T Consensus 1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~--------------------------~~d~~~~~~~~~~~~~~~~d~v 54 (287)
T TIGR01214 1 RILITGANGQLGRELVQQLSPEGRVVVALTSS--------------------------QLDLTDPEALERLLRAIRPDAV 54 (287)
T ss_pred CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc--------------------------ccCCCCHHHHHHHHHhCCCCEE
Confidence 58999999999999999999999999999873 3588999999999987678999
Q ss_pred EEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccCCCCCCCccCCCCCCCCChhHHhHHHHHH
Q 019795 86 IHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQWCEE 165 (335)
Q Consensus 86 i~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~Y~~sK~~~E~ 165 (335)
||+|+..........+..++++|+.++.+++++|++.+. ++|++||.++|+.....+++|+.+..|.+.|+.+|..+|+
T Consensus 55 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~~K~~~E~ 133 (287)
T TIGR01214 55 VNTAAYTDVDGAESDPEKAFAVNALAPQNLARAAARHGA-RLVHISTDYVFDGEGKRPYREDDATNPLNVYGQSKLAGEQ 133 (287)
T ss_pred EECCccccccccccCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEeeeeeecCCCCCCCCCCCCCCCcchhhHHHHHHHH
Confidence 999997544333445678899999999999999998875 8999999999987666789999988888999999999999
Q ss_pred HHHHHHhhCCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHHHhCCCCceeEecccCCCCCCceeeeeeeHhh
Q 019795 166 IAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAVRDYIHVMD 245 (335)
Q Consensus 166 ~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~v~~~D 245 (335)
+++.+ +++++++||+++||+... ..+...+...+.+..+ +.+.+ +..++|+|++|
T Consensus 134 ~~~~~-----~~~~~ilR~~~v~G~~~~-----------~~~~~~~~~~~~~~~~-~~~~~--------~~~~~~v~v~D 188 (287)
T TIGR01214 134 AIRAA-----GPNALIVRTSWLYGGGGG-----------RNFVRTMLRLAGRGEE-LRVVD--------DQIGSPTYAKD 188 (287)
T ss_pred HHHHh-----CCCeEEEEeeecccCCCC-----------CCHHHHHHHHhhcCCC-ceEec--------CCCcCCcCHHH
Confidence 98765 678999999999998521 2244444433433334 55544 35689999999
Q ss_pred hhc-----------cCceEEecCCccccHHHHHHHHHHHhCCCCCc------eeC-----CCCCCccceeeccHHHHHHh
Q 019795 246 LAD-----------GCIAYNLGNGKGISVLEMVAAFEKASGKKIPI------KFC-----PRRVGDATAVYAATDKAHKE 303 (335)
Q Consensus 246 ~~~-----------~~~~~nv~~~~~~s~~el~~~i~~~~g~~~~~------~~~-----~~~~~~~~~~~~d~~k~~~~ 303 (335)
+++ .+++||+++++.+|+.|+++.+.+.+|.+... ... +..........+|++|+++.
T Consensus 189 va~a~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 268 (287)
T TIGR01214 189 LARVIAALLQRLARARGVYHLANSGQCSWYEFAQAIFEEAGADGLLLHPQEVKPISSKEYPRPARRPAYSVLDNTKLVKT 268 (287)
T ss_pred HHHHHHHHHhhccCCCCeEEEECCCCcCHHHHHHHHHHHhCcccccccCceeEeecHHHcCCCCCCCCccccchHHHHHH
Confidence 987 36899999999999999999999999976431 111 11122234568999999999
Q ss_pred cCCccccCHHHHHHHHHH
Q 019795 304 LGWKPKYGIEDMCAHQWN 321 (335)
Q Consensus 304 Lg~~p~~~~~~~~~~~~~ 321 (335)
|||++. +++++|.++++
T Consensus 269 lg~~~~-~~~~~l~~~~~ 285 (287)
T TIGR01214 269 LGTPLP-HWREALRAYLQ 285 (287)
T ss_pred cCCCCc-cHHHHHHHHHh
Confidence 999554 99999998876
|
This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc. |
| >PLN00016 RNA-binding protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-37 Score=285.44 Aligned_cols=276 Identities=21% Similarity=0.282 Sum_probs=210.8
Q ss_pred CCCeEEEE----cCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhH----HhhhhhcCCccccceeEEEccCCCHHHHH
Q 019795 3 SEKNILVT----GGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAV----DRVKDLAGPELAKKLEFHVGDLRNKDDLD 74 (335)
Q Consensus 3 ~~~~vlIt----GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~ 74 (335)
++|+|||| |||||||++|++.|+++||+|++++|+........ ....++. ..+++++.+|+.| +.
T Consensus 51 ~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~----~~~v~~v~~D~~d---~~ 123 (378)
T PLN00016 51 EKKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELS----SAGVKTVWGDPAD---VK 123 (378)
T ss_pred ccceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhh----hcCceEEEecHHH---HH
Confidence 45789999 99999999999999999999999999765421110 0011111 1358899999876 55
Q ss_pred HHHhcCCCCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccCCCCCCCccCCCCCCCCC
Q 019795 75 KLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQPEKIPCVEDFPYGAMN 154 (335)
Q Consensus 75 ~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~ 154 (335)
+++...++|+|||+++. ++.++.+++++|++.|+++||++||.++||.....+..|+.+..|.+
T Consensus 124 ~~~~~~~~d~Vi~~~~~----------------~~~~~~~ll~aa~~~gvkr~V~~SS~~vyg~~~~~p~~E~~~~~p~~ 187 (378)
T PLN00016 124 SKVAGAGFDVVYDNNGK----------------DLDEVEPVADWAKSPGLKQFLFCSSAGVYKKSDEPPHVEGDAVKPKA 187 (378)
T ss_pred hhhccCCccEEEeCCCC----------------CHHHHHHHHHHHHHcCCCEEEEEccHhhcCCCCCCCCCCCCcCCCcc
Confidence 55544579999998653 23467789999999999999999999999976666777877766644
Q ss_pred hhHHhHHHHHHHHHHHHhhCCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHH-HHHHHhCCCCceeEecccCCCCC
Q 019795 155 PYGRTKQWCEEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPY-IQQVAVGRHPELNVYGQDYPTKD 233 (335)
Q Consensus 155 ~Y~~sK~~~E~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~ 233 (335)
+|..+|.+++. . +++++++||+++||+... ..+..+ +.++..+. + +.++| +
T Consensus 188 ----sK~~~E~~l~~----~-~l~~~ilRp~~vyG~~~~-----------~~~~~~~~~~~~~~~-~-i~~~g------~ 239 (378)
T PLN00016 188 ----GHLEVEAYLQK----L-GVNWTSFRPQYIYGPGNN-----------KDCEEWFFDRLVRGR-P-VPIPG------S 239 (378)
T ss_pred ----hHHHHHHHHHH----c-CCCeEEEeceeEECCCCC-----------CchHHHHHHHHHcCC-c-eeecC------C
Confidence 89999988753 3 899999999999998532 113333 34444444 3 56677 7
Q ss_pred CceeeeeeeHhhhhc-----------cCceEEecCCccccHHHHHHHHHHHhCCCCCceeCCCC----------CCccce
Q 019795 234 GSAVRDYIHVMDLAD-----------GCIAYNLGNGKGISVLEMVAAFEKASGKKIPIKFCPRR----------VGDATA 292 (335)
Q Consensus 234 ~~~~~~~v~~~D~~~-----------~~~~~nv~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~----------~~~~~~ 292 (335)
+.+.++|+|++|+++ .+++||+++++.+|+.|+++.+.+.+|.+..+...+.. +.....
T Consensus 240 g~~~~~~i~v~Dva~ai~~~l~~~~~~~~~yni~~~~~~s~~el~~~i~~~~g~~~~i~~~~~~~~~~~~~~~~p~~~~~ 319 (378)
T PLN00016 240 GIQLTQLGHVKDLASMFALVVGNPKAAGQIFNIVSDRAVTFDGMAKACAKAAGFPEEIVHYDPKAVGFGAKKAFPFRDQH 319 (378)
T ss_pred CCeeeceecHHHHHHHHHHHhcCccccCCEEEecCCCccCHHHHHHHHHHHhCCCCceeecCccccCccccccccccccc
Confidence 889999999999997 36899999999999999999999999987654332211 111234
Q ss_pred eeccHHHHHHhcCCccccCHHHHHHHHHHHHhcCCCC
Q 019795 293 VYAATDKAHKELGWKPKYGIEDMCAHQWNWAKNNPMG 329 (335)
Q Consensus 293 ~~~d~~k~~~~Lg~~p~~~~~~~~~~~~~~~~~~~~~ 329 (335)
...|++|+++.|||+|+++++++|.++++|+++++..
T Consensus 320 ~~~d~~ka~~~LGw~p~~~l~egl~~~~~~~~~~~~~ 356 (378)
T PLN00016 320 FFASPRKAKEELGWTPKFDLVEDLKDRYELYFGRGRD 356 (378)
T ss_pred cccCHHHHHHhcCCCCCCCHHHHHHHHHHHHHhcCCC
Confidence 4579999999999999999999999999999987753
|
|
| >COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-37 Score=262.49 Aligned_cols=263 Identities=24% Similarity=0.242 Sum_probs=227.0
Q ss_pred eEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCCCEE
Q 019795 6 NILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKFEAV 85 (335)
Q Consensus 6 ~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~d~v 85 (335)
+|||||++|++|++|++.|. .+++|+.++|. . +|++|.+.+.+++.+.+||+|
T Consensus 2 ~iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~~---------------------~-----~Ditd~~~v~~~i~~~~PDvV 54 (281)
T COG1091 2 KILITGANGQLGTELRRALP-GEFEVIATDRA---------------------E-----LDITDPDAVLEVIRETRPDVV 54 (281)
T ss_pred cEEEEcCCChHHHHHHHHhC-CCceEEeccCc---------------------c-----ccccChHHHHHHHHhhCCCEE
Confidence 39999999999999999998 67999998772 1 699999999999999999999
Q ss_pred EEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccCCCCCCCccCCCCCCCCChhHHhHHHHHH
Q 019795 86 IHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQWCEE 165 (335)
Q Consensus 86 i~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~Y~~sK~~~E~ 165 (335)
||+|++..+..++.+++..+.+|..++.+++++|++.|. ++||+||.+||......|+.|++++.|.+.||.||.++|+
T Consensus 55 In~AAyt~vD~aE~~~e~A~~vNa~~~~~lA~aa~~~ga-~lVhiSTDyVFDG~~~~~Y~E~D~~~P~nvYG~sKl~GE~ 133 (281)
T COG1091 55 INAAAYTAVDKAESEPELAFAVNATGAENLARAAAEVGA-RLVHISTDYVFDGEKGGPYKETDTPNPLNVYGRSKLAGEE 133 (281)
T ss_pred EECccccccccccCCHHHHHHhHHHHHHHHHHHHHHhCC-eEEEeecceEecCCCCCCCCCCCCCCChhhhhHHHHHHHH
Confidence 999999998888999999999999999999999999995 8999999999988888899999999999999999999999
Q ss_pred HHHHHHhhCCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHHHhCCCCceeEecccCCCCCCceeeeeeeHhh
Q 019795 166 IAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAVRDYIHVMD 245 (335)
Q Consensus 166 ~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~v~~~D 245 (335)
.++++ +-..+++|.+++||.+ ..+|...|.+.+..+++ +.+. .++..+.+++.|
T Consensus 134 ~v~~~-----~~~~~I~Rtswv~g~~------------g~nFv~tml~la~~~~~-l~vv--------~Dq~gsPt~~~d 187 (281)
T COG1091 134 AVRAA-----GPRHLILRTSWVYGEY------------GNNFVKTMLRLAKEGKE-LKVV--------DDQYGSPTYTED 187 (281)
T ss_pred HHHHh-----CCCEEEEEeeeeecCC------------CCCHHHHHHHHhhcCCc-eEEE--------CCeeeCCccHHH
Confidence 99876 4578999999999985 24577777777777765 5553 467888999999
Q ss_pred hhc----------cCceEEecCCccccHHHHHHHHHHHhCCCCCce-e-----CCCCCCccceeeccHHHHHHhcCCccc
Q 019795 246 LAD----------GCIAYNLGNGKGISVLEMVAAFEKASGKKIPIK-F-----CPRRVGDATAVYAATDKAHKELGWKPK 309 (335)
Q Consensus 246 ~~~----------~~~~~nv~~~~~~s~~el~~~i~~~~g~~~~~~-~-----~~~~~~~~~~~~~d~~k~~~~Lg~~p~ 309 (335)
+|+ .+++||+++.+.+||.|+++.|.+..+.+..+. . .+.....+.+..+|+.|+++.+|++|.
T Consensus 188 lA~~i~~ll~~~~~~~~yH~~~~g~~Swydfa~~I~~~~~~~~~v~~~~~~~~~~~~a~RP~~S~L~~~k~~~~~g~~~~ 267 (281)
T COG1091 188 LADAILELLEKEKEGGVYHLVNSGECSWYEFAKAIFEEAGVDGEVIEPIASAEYPTPAKRPANSSLDTKKLEKAFGLSLP 267 (281)
T ss_pred HHHHHHHHHhccccCcEEEEeCCCcccHHHHHHHHHHHhCCCccccccccccccCccCCCCcccccchHHHHHHhCCCCc
Confidence 997 344999999888999999999999998665332 1 122334456778999999999999999
Q ss_pred cCHHHHHHHHHHHH
Q 019795 310 YGIEDMCAHQWNWA 323 (335)
Q Consensus 310 ~~~~~~~~~~~~~~ 323 (335)
+|+++++.+++..
T Consensus 268 -~w~~~l~~~~~~~ 280 (281)
T COG1091 268 -EWREALKALLDEL 280 (281)
T ss_pred -cHHHHHHHHHhhc
Confidence 8999999988753
|
|
| >KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-36 Score=260.78 Aligned_cols=298 Identities=19% Similarity=0.204 Sum_probs=221.8
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCC
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKF 82 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~ 82 (335)
.+++|+|||||||||+++++.|+++||.|++..|++.. ....+.+.++.+ .++++..+.+||.|++++.++++ ++
T Consensus 5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~-~k~~~~L~~l~~--a~~~l~l~~aDL~d~~sf~~ai~--gc 79 (327)
T KOG1502|consen 5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPED-EKKTEHLRKLEG--AKERLKLFKADLLDEGSFDKAID--GC 79 (327)
T ss_pred CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcch-hhhHHHHHhccc--CcccceEEeccccccchHHHHHh--CC
Confidence 35899999999999999999999999999999998765 223233444332 12569999999999999999999 89
Q ss_pred CEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcC-CCEEEEecccccc-CC----CCCCCccCCCCCCC----
Q 019795 83 EAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYN-CKKLVFSSSATIY-GQ----PEKIPCVEDFPYGA---- 152 (335)
Q Consensus 83 d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~v~~Ss~~vy-g~----~~~~~~~e~~~~~~---- 152 (335)
|.|||.|.+....... ...+..+.++.|+.+++++|++.. ++|+|++||.+.- .. .....++|+.-..+
T Consensus 80 dgVfH~Asp~~~~~~~-~e~~li~pav~Gt~nVL~ac~~~~sVkrvV~TSS~aAv~~~~~~~~~~~vvdE~~wsd~~~~~ 158 (327)
T KOG1502|consen 80 DGVFHTASPVDFDLED-PEKELIDPAVKGTKNVLEACKKTKSVKRVVYTSSTAAVRYNGPNIGENSVVDEESWSDLDFCR 158 (327)
T ss_pred CEEEEeCccCCCCCCC-cHHhhhhHHHHHHHHHHHHHhccCCcceEEEeccHHHhccCCcCCCCCcccccccCCcHHHHH
Confidence 9999999986654333 344799999999999999999987 9999999996643 22 13345677654332
Q ss_pred --CChhHHhHHHHHHHHHHHHhhCCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHHHhCCCCceeEecccCC
Q 019795 153 --MNPYGRTKQWCEEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYP 230 (335)
Q Consensus 153 --~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 230 (335)
...|..||..+|+.+++++++. +++.+++-|+.|+||.... . ...-...+...+.|.....
T Consensus 159 ~~~~~Y~~sK~lAEkaAw~fa~e~-~~~lv~inP~lV~GP~l~~-------~-l~~s~~~~l~~i~G~~~~~-------- 221 (327)
T KOG1502|consen 159 CKKLWYALSKTLAEKAAWEFAKEN-GLDLVTINPGLVFGPGLQP-------S-LNSSLNALLKLIKGLAETY-------- 221 (327)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhC-CccEEEecCCceECCCccc-------c-cchhHHHHHHHHhcccccC--------
Confidence 2469999999999999999998 9999999999999995331 1 1122234444455533211
Q ss_pred CCCCceeeeeeeHhhhhc----------cCceEEecCCccccHHHHHHHHHHHhCCCC-CceeCCCCCCccceeeccHHH
Q 019795 231 TKDGSAVRDYIHVMDLAD----------GCIAYNLGNGKGISVLEMVAAFEKASGKKI-PIKFCPRRVGDATAVYAATDK 299 (335)
Q Consensus 231 ~~~~~~~~~~v~~~D~~~----------~~~~~nv~~~~~~s~~el~~~i~~~~g~~~-~~~~~~~~~~~~~~~~~d~~k 299 (335)
......|||++|+|. .++.|.+ .++..++.|+++.+.+.+.... +...............++++|
T Consensus 222 ---~n~~~~~VdVrDVA~AHv~a~E~~~a~GRyic-~~~~~~~~ei~~~l~~~~P~~~ip~~~~~~~~~~~~~~~~~~~k 297 (327)
T KOG1502|consen 222 ---PNFWLAFVDVRDVALAHVLALEKPSAKGRYIC-VGEVVSIKEIADILRELFPDYPIPKKNAEEHEGFLTSFKVSSEK 297 (327)
T ss_pred ---CCCceeeEeHHHHHHHHHHHHcCcccCceEEE-ecCcccHHHHHHHHHHhCCCCCCCCCCCccccccccccccccHH
Confidence 122344999999998 5778866 5667779999999999986433 111111112223334689999
Q ss_pred HHHhcCCccccCHHHHHHHHHHHHhcCCC
Q 019795 300 AHKELGWKPKYGIEDMCAHQWNWAKNNPM 328 (335)
Q Consensus 300 ~~~~Lg~~p~~~~~~~~~~~~~~~~~~~~ 328 (335)
+++.+||+++ ++++.+.++++++++.+.
T Consensus 298 ~k~lg~~~~~-~l~e~~~dt~~sl~~~~~ 325 (327)
T KOG1502|consen 298 LKSLGGFKFR-PLEETLSDTVESLREKGL 325 (327)
T ss_pred HHhcccceec-ChHHHHHHHHHHHHHhcC
Confidence 9766668888 999999999999998764
|
|
| >KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-37 Score=270.40 Aligned_cols=300 Identities=23% Similarity=0.344 Sum_probs=235.4
Q ss_pred CCCCCeEEEEcCCChhhHHHHHHHHhCC--CeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHh
Q 019795 1 MASEKNILVTGGAGFIGTHCALQLLQGG--FKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFS 78 (335)
Q Consensus 1 ~~~~~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~ 78 (335)
|.++.+++||||+||+|+||+++|++++ .++++++..+.......+... ..+..+.++.+|++|..++.++++
T Consensus 1 ~~~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~~-----~~~~~v~~~~~D~~~~~~i~~a~~ 75 (361)
T KOG1430|consen 1 MEKKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELTG-----FRSGRVTVILGDLLDANSISNAFQ 75 (361)
T ss_pred CCcCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhhc-----ccCCceeEEecchhhhhhhhhhcc
Confidence 7789999999999999999999999998 899999987653222111111 023789999999999999999998
Q ss_pred cCCCCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccCCCCC-CCccCCCCCC--CCCh
Q 019795 79 SQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQPEK-IPCVEDFPYG--AMNP 155 (335)
Q Consensus 79 ~~~~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~-~~~~e~~~~~--~~~~ 155 (335)
++ .|+|+|+.....-...+.+..+++||.||.+++++|++.+++++||+||..|+..... ...+|+.|+. ..++
T Consensus 76 --~~-~Vvh~aa~~~~~~~~~~~~~~~~vNV~gT~nvi~~c~~~~v~~lIYtSs~~Vvf~g~~~~n~~E~~p~p~~~~d~ 152 (361)
T KOG1430|consen 76 --GA-VVVHCAASPVPDFVENDRDLAMRVNVNGTLNVIEACKELGVKRLIYTSSAYVVFGGEPIINGDESLPYPLKHIDP 152 (361)
T ss_pred --Cc-eEEEeccccCccccccchhhheeecchhHHHHHHHHHHhCCCEEEEecCceEEeCCeecccCCCCCCCccccccc
Confidence 77 8888888765544455788999999999999999999999999999999999765443 4456665544 3468
Q ss_pred hHHhHHHHHHHHHHHHhhCCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHHHhCCCCceeEecccCCCCCCc
Q 019795 156 YGRTKQWCEEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGS 235 (335)
Q Consensus 156 Y~~sK~~~E~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 235 (335)
|+.||+.+|++++++.... ++.+++|||+.||||.+ ..+.+.+..++..... +...| ++.
T Consensus 153 Y~~sKa~aE~~Vl~an~~~-~l~T~aLR~~~IYGpgd------------~~~~~~i~~~~~~g~~-~f~~g------~~~ 212 (361)
T KOG1430|consen 153 YGESKALAEKLVLEANGSD-DLYTCALRPPGIYGPGD------------KRLLPKIVEALKNGGF-LFKIG------DGE 212 (361)
T ss_pred cchHHHHHHHHHHHhcCCC-CeeEEEEccccccCCCC------------ccccHHHHHHHHccCc-eEEee------ccc
Confidence 9999999999999988654 89999999999999953 3355655555544444 44555 567
Q ss_pred eeeeeeeHhhhhc----------------cCceEEecCCccccHHHHHHHHHHHhCCCCCc-eeCCC-------------
Q 019795 236 AVRDYIHVMDLAD----------------GCIAYNLGNGKGISVLEMVAAFEKASGKKIPI-KFCPR------------- 285 (335)
Q Consensus 236 ~~~~~v~~~D~~~----------------~~~~~nv~~~~~~s~~el~~~i~~~~g~~~~~-~~~~~------------- 285 (335)
.+-+|+++..++. .|++|+|.+++++...++...+.+.+|...+. ...|.
T Consensus 213 ~~~~~~~~~Nva~ahilA~~aL~~~~~~~~Gq~yfI~d~~p~~~~~~~~~l~~~lg~~~~~~~~~p~~l~~~~~~l~e~~ 292 (361)
T KOG1430|consen 213 NLNDFTYGENVAWAHILAARALLDKSPSVNGQFYFITDDTPVRFFDFLSPLVKALGYCLPSSIKLPLFLSYFLAYLLEIV 292 (361)
T ss_pred cccceEEechhHHHHHHHHHHHHhcCCccCceEEEEeCCCcchhhHHHHHHHHhcCCCCCceeecchHHHHHHHHHHHHH
Confidence 7788888887654 69999999999998888888999999987662 21111
Q ss_pred -------CCC--------ccceeeccHHHHHHhcCCccccCHHHHHHHHHHHHhcCCC
Q 019795 286 -------RVG--------DATAVYAATDKAHKELGWKPKYGIEDMCAHQWNWAKNNPM 328 (335)
Q Consensus 286 -------~~~--------~~~~~~~d~~k~~~~Lg~~p~~~~~~~~~~~~~~~~~~~~ 328 (335)
.+. -.....++++|+++.|||.|.+++++++.+++.|+.....
T Consensus 293 ~~~l~p~~p~lt~~~v~~~~~~~~f~~~kA~~~lgY~P~~~~~e~~~~~~~~~~~~~~ 350 (361)
T KOG1430|consen 293 YFLLRPYQPILTRFRVALLGVTRTFSIEKAKRELGYKPLVSLEEAIQRTIHWVASESD 350 (361)
T ss_pred HHhccCCCCCcChhheeeeccccccCHHHHHHhhCCCCcCCHHHHHHHHHHHHhhhhh
Confidence 010 0135578999999999999999999999999999887554
|
|
| >PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-36 Score=265.60 Aligned_cols=243 Identities=26% Similarity=0.394 Sum_probs=190.1
Q ss_pred EEEcCCChhhHHHHHHHHhCC--CeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCCCEE
Q 019795 8 LVTGGAGFIGTHCALQLLQGG--FKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKFEAV 85 (335)
Q Consensus 8 lItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~d~v 85 (335)
|||||+||||++|+++|+++| ++|+++++.+..... ..+.. .....++.+|++|++++.++++ ++|+|
T Consensus 1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~~--~~~~~------~~~~~~~~~Di~d~~~l~~a~~--g~d~V 70 (280)
T PF01073_consen 1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKFL--KDLQK------SGVKEYIQGDITDPESLEEALE--GVDVV 70 (280)
T ss_pred CEEcCCcHHHHHHHHHHHHCCCceEEEEcccccccccc--hhhhc------ccceeEEEeccccHHHHHHHhc--CCceE
Confidence 699999999999999999999 789999886654321 11111 0233489999999999999999 89999
Q ss_pred EEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccCCC-CCC---CccCCCCCC--CCChhHHh
Q 019795 86 IHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQP-EKI---PCVEDFPYG--AMNPYGRT 159 (335)
Q Consensus 86 i~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~-~~~---~~~e~~~~~--~~~~Y~~s 159 (335)
||+|+...... ....+.++++|+.||.+|+++|++.+++++||+||.++++.. ... ..+|+.+.. +.+.|+.|
T Consensus 71 ~H~Aa~~~~~~-~~~~~~~~~vNV~GT~nvl~aa~~~~VkrlVytSS~~vv~~~~~~~~~~~~dE~~~~~~~~~~~Y~~S 149 (280)
T PF01073_consen 71 FHTAAPVPPWG-DYPPEEYYKVNVDGTRNVLEAARKAGVKRLVYTSSISVVFDNYKGDPIINGDEDTPYPSSPLDPYAES 149 (280)
T ss_pred EEeCccccccC-cccHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcCcceeEeccCCCCcccCCcCCcccccccCchHHH
Confidence 99999854432 345668999999999999999999999999999999998762 112 235665543 46689999
Q ss_pred HHHHHHHHHHHHh---hC-CCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHHHhCCCCceeEecccCCCCCCc
Q 019795 160 KQWCEEIAFDVQK---AD-PEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGS 235 (335)
Q Consensus 160 K~~~E~~~~~~~~---~~-~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 235 (335)
|.++|++++++.. +. ..+.+++|||+.||||.+. .+.+.+......+.. ....| ++.
T Consensus 150 K~~AE~~V~~a~~~~~~~g~~l~t~~lRP~~IyGp~d~------------~~~~~~~~~~~~g~~-~~~~g------~~~ 210 (280)
T PF01073_consen 150 KALAEKAVLEANGSELKNGGRLRTCALRPAGIYGPGDQ------------RLVPRLVKMVRSGLF-LFQIG------DGN 210 (280)
T ss_pred HHHHHHHHHhhcccccccccceeEEEEeccEEeCcccc------------cccchhhHHHHhccc-ceeec------CCC
Confidence 9999999998775 22 2589999999999999633 233444433333322 34566 677
Q ss_pred eeeeeeeHhhhhc------------------cCceEEecCCcccc-HHHHHHHHHHHhCCCCCc
Q 019795 236 AVRDYIHVMDLAD------------------GCIAYNLGNGKGIS-VLEMVAAFEKASGKKIPI 280 (335)
Q Consensus 236 ~~~~~v~~~D~~~------------------~~~~~nv~~~~~~s-~~el~~~i~~~~g~~~~~ 280 (335)
...+|+|++|+|. .|++|+|++++++. +.|++..+.+.+|.+.+.
T Consensus 211 ~~~~~vyV~NvA~ahvlA~~~L~~~~~~~~~~G~~y~itd~~p~~~~~~f~~~~~~~~G~~~~~ 274 (280)
T PF01073_consen 211 NLFDFVYVENVAHAHVLAAQALLEPGKPERVAGQAYFITDGEPVPSFWDFMRPLWEALGYPPPK 274 (280)
T ss_pred ceECcEeHHHHHHHHHHHHHHhccccccccCCCcEEEEECCCccCcHHHHHHHHHHHCCCCCCc
Confidence 8899999999987 47899999999999 999999999999987665
|
3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process |
| >PLN02686 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-36 Score=274.57 Aligned_cols=285 Identities=15% Similarity=0.125 Sum_probs=210.6
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCc-cccceeEEEccCCCHHHHHHHHhcC
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPE-LAKKLEFHVGDLRNKDDLDKLFSSQ 80 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~Dl~d~~~~~~~~~~~ 80 (335)
+++|+||||||+||||++|+++|+++|++|+++.|+....... ..+....... ....+.++.+|++|.+++.++++
T Consensus 51 ~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l-~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i~-- 127 (367)
T PLN02686 51 AEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKL-REMEMFGEMGRSNDGIWTVMANLTEPESLHEAFD-- 127 (367)
T ss_pred CCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHHhhhccccccCCceEEEEcCCCCHHHHHHHHH--
Confidence 4678999999999999999999999999999888764322111 1111100000 01357889999999999999998
Q ss_pred CCCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHc-CCCEEEEeccc--cccCCC--CC--CCccCCC-----
Q 019795 81 KFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKY-NCKKLVFSSSA--TIYGQP--EK--IPCVEDF----- 148 (335)
Q Consensus 81 ~~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~-~~~~~v~~Ss~--~vyg~~--~~--~~~~e~~----- 148 (335)
++|+|||+|+...............++|+.++.+++++|++. +++++|++||. .+||.. .. ..++|+.
T Consensus 128 ~~d~V~hlA~~~~~~~~~~~~~~~~~~nv~gt~~llea~~~~~~v~r~V~~SS~~~~vyg~~~~~~~~~~i~E~~~~~~~ 207 (367)
T PLN02686 128 GCAGVFHTSAFVDPAGLSGYTKSMAELEAKASENVIEACVRTESVRKCVFTSSLLACVWRQNYPHDLPPVIDEESWSDES 207 (367)
T ss_pred hccEEEecCeeecccccccccchhhhhhHHHHHHHHHHHHhcCCccEEEEeccHHHhcccccCCCCCCcccCCCCCCChh
Confidence 789999999875332211122356778999999999999986 79999999996 477642 11 2355543
Q ss_pred -CCCCCChhHHhHHHHHHHHHHHHhhCCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHHHhCCCCceeEecc
Q 019795 149 -PYGAMNPYGRTKQWCEEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQ 227 (335)
Q Consensus 149 -~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 227 (335)
+..|.++|+.||.++|++++.+.+++ +++++++||++||||+.... . +. .+...+.+. +.++|
T Consensus 208 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~-gl~~v~lRp~~vyGp~~~~~------~-~~----~~~~~~~g~---~~~~g- 271 (367)
T PLN02686 208 FCRDNKLWYALGKLKAEKAAWRAARGK-GLKLATICPALVTGPGFFRR------N-ST----ATIAYLKGA---QEMLA- 271 (367)
T ss_pred hcccccchHHHHHHHHHHHHHHHHHhc-CceEEEEcCCceECCCCCCC------C-Ch----hHHHHhcCC---CccCC-
Confidence 33456789999999999999888877 99999999999999953210 0 11 122334443 33445
Q ss_pred cCCCCCCceeeeeeeHhhhhc-------c------CceEEecCCccccHHHHHHHHHHHhCCCCCceeCCCC-CCcccee
Q 019795 228 DYPTKDGSAVRDYIHVMDLAD-------G------CIAYNLGNGKGISVLEMVAAFEKASGKKIPIKFCPRR-VGDATAV 293 (335)
Q Consensus 228 ~~~~~~~~~~~~~v~~~D~~~-------~------~~~~nv~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~-~~~~~~~ 293 (335)
++. ++|+|++|+++ . +++| +++++.+|+.|+++.+.+.+|.+......+.. +.+....
T Consensus 272 -----~g~--~~~v~V~Dva~A~~~al~~~~~~~~~~~y-i~~g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~d~~~~ 343 (367)
T PLN02686 272 -----DGL--LATADVERLAEAHVCVYEAMGNKTAFGRY-ICFDHVVSREDEAEELARQIGLPINKIAGNSSSDDTPARF 343 (367)
T ss_pred -----CCC--cCeEEHHHHHHHHHHHHhccCCCCCCCcE-EEeCCCccHHHHHHHHHHHcCCCCCcCCCchhhcCCcccc
Confidence 443 57999999987 1 3478 88899999999999999999987766655555 6778889
Q ss_pred eccHHHHHHhcCCccccCHH
Q 019795 294 YAATDKAHKELGWKPKYGIE 313 (335)
Q Consensus 294 ~~d~~k~~~~Lg~~p~~~~~ 313 (335)
..|++|+++.|||.|+..++
T Consensus 344 ~~d~~kl~~~l~~~~~~~~~ 363 (367)
T PLN02686 344 ELSNKKLSRLMSRTRRCCYD 363 (367)
T ss_pred cccHHHHHHHHHHhhhcccc
Confidence 99999999999999986544
|
|
| >KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-36 Score=241.62 Aligned_cols=290 Identities=23% Similarity=0.269 Sum_probs=237.8
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhCCC--eEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCC
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQGGF--KVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQK 81 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~ 81 (335)
||+|||||++|.+|+++.+.+..+|. +-.++. ..-.+|+++.++.+++|++.+
T Consensus 1 s~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~-------------------------~skd~DLt~~a~t~~lF~~ek 55 (315)
T KOG1431|consen 1 SKKILVTGGTGLVGSAIVKVVQEQGFDDENWVFI-------------------------GSKDADLTNLADTRALFESEK 55 (315)
T ss_pred CceEEEecCCchHHHHHHHHHHhcCCCCcceEEe-------------------------ccccccccchHHHHHHHhccC
Confidence 57999999999999999999999876 222221 113469999999999999999
Q ss_pred CCEEEEccccc-chhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccCCCCCCCccCCC----CCCCCC-h
Q 019795 82 FEAVIHFGALK-AVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQPEKIPCVEDF----PYGAMN-P 155 (335)
Q Consensus 82 ~d~vi~~a~~~-~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~----~~~~~~-~ 155 (335)
|..|||+|+.. ........+...++.|+..--|++..|-+.|++++|++.|+++|......|++|+. |+.|.+ .
T Consensus 56 PthVIhlAAmVGGlf~N~~ynldF~r~Nl~indNVlhsa~e~gv~K~vsclStCIfPdkt~yPIdEtmvh~gpphpsN~g 135 (315)
T KOG1431|consen 56 PTHVIHLAAMVGGLFHNNTYNLDFIRKNLQINDNVLHSAHEHGVKKVVSCLSTCIFPDKTSYPIDETMVHNGPPHPSNFG 135 (315)
T ss_pred CceeeehHhhhcchhhcCCCchHHHhhcceechhHHHHHHHhchhhhhhhcceeecCCCCCCCCCHHHhccCCCCCCchH
Confidence 99999999974 34445667778899999999999999999999999999999999988888999974 555554 4
Q ss_pred hHHhHHHHHHHHHHHHhhCCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHHHhCCCCceeEecccCCCCCCc
Q 019795 156 YGRTKQWCEEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGS 235 (335)
Q Consensus 156 Y~~sK~~~E~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 235 (335)
|+.+|.++.-..++|..++ |...+.+-|.|+|||+++.... .... ...++..+..+...+...+.+|| +|.
T Consensus 136 YsyAKr~idv~n~aY~~qh-g~~~tsviPtNvfGphDNfnpe-~sHV-lPali~r~h~ak~~gtd~~~VwG------sG~ 206 (315)
T KOG1431|consen 136 YSYAKRMIDVQNQAYRQQH-GRDYTSVIPTNVFGPHDNFNPE-NSHV-LPALIHRFHEAKRNGTDELTVWG------SGS 206 (315)
T ss_pred HHHHHHHHHHHHHHHHHHh-CCceeeeccccccCCCCCCCcc-cccc-hHHHHHHHHHHHhcCCceEEEec------CCC
Confidence 9999999998889999988 9999999999999998764321 1112 22233444445555554589999 999
Q ss_pred eeeeeeeHhhhhc----------cCceEEecCCc--cccHHHHHHHHHHHhCCCCCceeCCCCCCccceeeccHHHHHHh
Q 019795 236 AVRDYIHVMDLAD----------GCIAYNLGNGK--GISVLEMVAAFEKASGKKIPIKFCPRRVGDATAVYAATDKAHKE 303 (335)
Q Consensus 236 ~~~~~v~~~D~~~----------~~~~~nv~~~~--~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~d~~k~~~~ 303 (335)
+.|+|+|++|+|+ .-+-.++++++ .+|++|+++++.++++....+.+.-..+.......+|++|+ +.
T Consensus 207 PlRqFiys~DLA~l~i~vlr~Y~~vEpiils~ge~~EVtI~e~aeaV~ea~~F~G~l~~DttK~DGq~kKtasnsKL-~s 285 (315)
T KOG1431|consen 207 PLRQFIYSDDLADLFIWVLREYEGVEPIILSVGESDEVTIREAAEAVVEAVDFTGKLVWDTTKSDGQFKKTASNSKL-RS 285 (315)
T ss_pred hHHHHhhHhHHHHHHHHHHHhhcCccceEeccCccceeEHHHHHHHHHHHhCCCceEEeeccCCCCCcccccchHHH-HH
Confidence 9999999999998 45667888887 89999999999999999888887666666777888999999 58
Q ss_pred cCCccccC-HHHHHHHHHHHHhcCCC
Q 019795 304 LGWKPKYG-IEDMCAHQWNWAKNNPM 328 (335)
Q Consensus 304 Lg~~p~~~-~~~~~~~~~~~~~~~~~ 328 (335)
|+|.|+++ |+++|.++++|+.++-.
T Consensus 286 l~pd~~ft~l~~ai~~t~~Wy~~Ny~ 311 (315)
T KOG1431|consen 286 LLPDFKFTPLEQAISETVQWYLDNYE 311 (315)
T ss_pred hCCCcccChHHHHHHHHHHHHHHhHH
Confidence 88999996 99999999999988643
|
|
| >PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-35 Score=252.76 Aligned_cols=225 Identities=36% Similarity=0.617 Sum_probs=191.7
Q ss_pred EEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCCCEEE
Q 019795 7 ILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKFEAVI 86 (335)
Q Consensus 7 vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~d~vi 86 (335)
|||||||||||++|+++|+++|+.|+.+.|+..+....... .++.++.+|+.|.+.+.++++...+|+||
T Consensus 1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~----------~~~~~~~~dl~~~~~~~~~~~~~~~d~vi 70 (236)
T PF01370_consen 1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKK----------LNVEFVIGDLTDKEQLEKLLEKANIDVVI 70 (236)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHH----------TTEEEEESETTSHHHHHHHHHHHTESEEE
T ss_pred EEEEccCCHHHHHHHHHHHHcCCcccccccccccccccccc----------ceEEEEEeeccccccccccccccCceEEE
Confidence 79999999999999999999999999999876654332221 26889999999999999999977889999
Q ss_pred EcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccCCCCCCCccCCCCCCCCChhHHhHHHHHHH
Q 019795 87 HFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQWCEEI 166 (335)
Q Consensus 87 ~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~Y~~sK~~~E~~ 166 (335)
|+|+..........+...++.|+.++.+++++|++.+++++|++||..+|+.....+++|+++..|.++|+.+|...|++
T Consensus 71 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~sS~~~y~~~~~~~~~e~~~~~~~~~Y~~~K~~~e~~ 150 (236)
T PF01370_consen 71 HLAAFSSNPESFEDPEEIIEANVQGTRNLLEAAREAGVKRFIFLSSASVYGDPDGEPIDEDSPINPLSPYGASKRAAEEL 150 (236)
T ss_dssp EEBSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTSEEEEEEEGGGGTSSSSSSBETTSGCCHSSHHHHHHHHHHHH
T ss_pred Eeeccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 99998654444578889999999999999999999998999999999999998778899999999999999999999999
Q ss_pred HHHHHhhCCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHHHhCCCCceeEecccCCCCCCceeeeeeeHhhh
Q 019795 167 AFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAVRDYIHVMDL 246 (335)
Q Consensus 167 ~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~v~~~D~ 246 (335)
++.+.+++ +++++++||+++||+. ........+++.+...+..+.+ +.++| ++.+.++|+|++|+
T Consensus 151 ~~~~~~~~-~~~~~~~R~~~vyG~~-------~~~~~~~~~~~~~~~~~~~~~~-~~~~~------~~~~~~~~i~v~D~ 215 (236)
T PF01370_consen 151 LRDYAKKY-GLRVTILRPPNVYGPG-------NPNNNSSSFLPSLIRQALKGKP-IKIPG------DGSQVRDFIHVDDL 215 (236)
T ss_dssp HHHHHHHH-TSEEEEEEESEEESTT-------SSSSSTSSHHHHHHHHHHTTSS-EEEES------TSSCEEEEEEHHHH
T ss_pred cccccccc-cccccccccccccccc-------ccccccccccchhhHHhhcCCc-ccccC------CCCCccceEEHHHH
Confidence 99999888 9999999999999996 1111245566655555545445 78888 89999999999999
Q ss_pred hc-----------cCceEEec
Q 019795 247 AD-----------GCIAYNLG 256 (335)
Q Consensus 247 ~~-----------~~~~~nv~ 256 (335)
++ .+++|||+
T Consensus 216 a~~~~~~~~~~~~~~~~yNig 236 (236)
T PF01370_consen 216 AEAIVAALENPKAAGGIYNIG 236 (236)
T ss_dssp HHHHHHHHHHSCTTTEEEEES
T ss_pred HHHHHHHHhCCCCCCCEEEeC
Confidence 98 37899985
|
The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B .... |
| >CHL00194 ycf39 Ycf39; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-33 Score=249.14 Aligned_cols=261 Identities=19% Similarity=0.201 Sum_probs=196.7
Q ss_pred CeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCCCE
Q 019795 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKFEA 84 (335)
Q Consensus 5 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~d~ 84 (335)
|+|+|||||||+|++|+++|+++||+|++++|+..... .+. ..+++++.+|++|++++.++++ ++|+
T Consensus 1 MkIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~----~l~-------~~~v~~v~~Dl~d~~~l~~al~--g~d~ 67 (317)
T CHL00194 1 MSLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKAS----FLK-------EWGAELVYGDLSLPETLPPSFK--GVTA 67 (317)
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhh----hHh-------hcCCEEEECCCCCHHHHHHHHC--CCCE
Confidence 48999999999999999999999999999999753221 111 1468899999999999999998 8999
Q ss_pred EEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccCCCCCCCccCCCCCCCCChhHHhHHHHH
Q 019795 85 VIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQWCE 164 (335)
Q Consensus 85 vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~Y~~sK~~~E 164 (335)
|||+++.. ..++....++|+.++.+++++|++.+++++|++||..... .+..+|..+|..+|
T Consensus 68 Vi~~~~~~-----~~~~~~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss~~~~~-------------~~~~~~~~~K~~~e 129 (317)
T CHL00194 68 IIDASTSR-----PSDLYNAKQIDWDGKLALIEAAKAAKIKRFIFFSILNAEQ-------------YPYIPLMKLKSDIE 129 (317)
T ss_pred EEECCCCC-----CCCccchhhhhHHHHHHHHHHHHHcCCCEEEEeccccccc-------------cCCChHHHHHHHHH
Confidence 99987642 1233457788999999999999999999999999854320 12246889999999
Q ss_pred HHHHHHHhhCCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHHHhCCCCceeEecccCCCCCCceeeeeeeHh
Q 019795 165 EIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAVRDYIHVM 244 (335)
Q Consensus 165 ~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~v~~~ 244 (335)
++++. . +++++++||+.+|+.- +..+......+. + +.+. ++.+.++|+|++
T Consensus 130 ~~l~~----~-~l~~tilRp~~~~~~~---------------~~~~~~~~~~~~-~-~~~~-------~~~~~~~~i~v~ 180 (317)
T CHL00194 130 QKLKK----S-GIPYTIFRLAGFFQGL---------------ISQYAIPILEKQ-P-IWIT-------NESTPISYIDTQ 180 (317)
T ss_pred HHHHH----c-CCCeEEEeecHHhhhh---------------hhhhhhhhccCC-c-eEec-------CCCCccCccCHH
Confidence 98754 3 8999999999887631 001111222222 3 3333 356678999999
Q ss_pred hhhc-----------cCceEEecCCccccHHHHHHHHHHHhCCCCCceeCCCCCC-----------------c-------
Q 019795 245 DLAD-----------GCIAYNLGNGKGISVLEMVAAFEKASGKKIPIKFCPRRVG-----------------D------- 289 (335)
Q Consensus 245 D~~~-----------~~~~~nv~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~-----------------~------- 289 (335)
|+++ .+++||+++++.+|+.|+++.+.+.+|.+..+...|.+.. .
T Consensus 181 Dva~~~~~~l~~~~~~~~~~ni~g~~~~s~~el~~~~~~~~g~~~~~~~vp~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 260 (317)
T CHL00194 181 DAAKFCLKSLSLPETKNKTFPLVGPKSWNSSEIISLCEQLSGQKAKISRVPLFLLKLLRQITGFFEWTWNISDRLAFVEI 260 (317)
T ss_pred HHHHHHHHHhcCccccCcEEEecCCCccCHHHHHHHHHHHhCCCCeEEeCCHHHHHHHHHHHhhcccchhhHHHHHHHHH
Confidence 9997 4689999999999999999999999998765554442100 0
Q ss_pred --c-ceeeccHHHHHHhcCCccc--cCHHHHHHHHHHHHhc
Q 019795 290 --A-TAVYAATDKAHKELGWKPK--YGIEDMCAHQWNWAKN 325 (335)
Q Consensus 290 --~-~~~~~d~~k~~~~Lg~~p~--~~~~~~~~~~~~~~~~ 325 (335)
. .....+.+++++.||+.|. .+++++++++++-..+
T Consensus 261 ~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~ 301 (317)
T CHL00194 261 LNTSNNFSSSMAELYKIFKIDPNELISLEDYFQEYFERILK 301 (317)
T ss_pred HhcCCCcCCCHHHHHHHhCCChhhhhhHHHHHHHHHHHHHH
Confidence 0 1344578899999999984 4899998888877665
|
|
| >COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-32 Score=249.30 Aligned_cols=251 Identities=25% Similarity=0.393 Sum_probs=215.6
Q ss_pred CCCCCeEEEEcCCChhhHHHHHHHHhCC-CeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc
Q 019795 1 MASEKNILVTGGAGFIGTHCALQLLQGG-FKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS 79 (335)
Q Consensus 1 ~~~~~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~ 79 (335)
|..+|+||||||+|-||+.+++++++.+ -++++++|++.+.......++...+ ..++.++.+|++|.+.+..+++.
T Consensus 247 ~~~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~---~~~~~~~igdVrD~~~~~~~~~~ 323 (588)
T COG1086 247 MLTGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFP---ELKLRFYIGDVRDRDRVERAMEG 323 (588)
T ss_pred HcCCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCC---CcceEEEecccccHHHHHHHHhc
Confidence 5678999999999999999999999987 5688899998888877777776544 36889999999999999999998
Q ss_pred CCCCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccCCCCCCCccCCCCCCCCChhHHh
Q 019795 80 QKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRT 159 (335)
Q Consensus 80 ~~~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~Y~~s 159 (335)
.++|+|+|+||..++...+.+|.+.++.|+.||.|++++|.+++++++|.+||.- ..+|.+.||.|
T Consensus 324 ~kvd~VfHAAA~KHVPl~E~nP~Eai~tNV~GT~nv~~aa~~~~V~~~V~iSTDK--------------AV~PtNvmGaT 389 (588)
T COG1086 324 HKVDIVFHAAALKHVPLVEYNPEEAIKTNVLGTENVAEAAIKNGVKKFVLISTDK--------------AVNPTNVMGAT 389 (588)
T ss_pred CCCceEEEhhhhccCcchhcCHHHHHHHhhHhHHHHHHHHHHhCCCEEEEEecCc--------------ccCCchHhhHH
Confidence 8899999999999999999999999999999999999999999999999999954 46788999999
Q ss_pred HHHHHHHHHHHHhhCC--CCeEEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHHHhCCCCceeEecccCCCCCCcee
Q 019795 160 KQWCEEIAFDVQKADP--EWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAV 237 (335)
Q Consensus 160 K~~~E~~~~~~~~~~~--~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 237 (335)
|.++|+++.++..... +..++++|+|||.|.+.+ .+|.+.+-...+.| +++ |+++-+
T Consensus 390 Kr~aE~~~~a~~~~~~~~~T~f~~VRFGNVlGSrGS-------------ViPlFk~QI~~Ggp-lTv-------Tdp~mt 448 (588)
T COG1086 390 KRLAEKLFQAANRNVSGTGTRFCVVRFGNVLGSRGS-------------VIPLFKKQIAEGGP-LTV-------TDPDMT 448 (588)
T ss_pred HHHHHHHHHHHhhccCCCCcEEEEEEecceecCCCC-------------CHHHHHHHHHcCCC-ccc-------cCCCce
Confidence 9999999998877543 388999999999998422 77877665555555 555 368889
Q ss_pred eeeeeHhhhhc----------cCceEEecCCccccHHHHHHHHHHHhC----CCCCceeCCCCCCc
Q 019795 238 RDYIHVMDLAD----------GCIAYNLGNGKGISVLEMVAAFEKASG----KKIPIKFCPRRVGD 289 (335)
Q Consensus 238 ~~~v~~~D~~~----------~~~~~nv~~~~~~s~~el~~~i~~~~g----~~~~~~~~~~~~~~ 289 (335)
|-|+.+.|+++ +|++|-+-.|+++++.|+++.+.+..| .++++.+..-++++
T Consensus 449 RyfMTI~EAv~LVlqA~a~~~gGeifvldMGepvkI~dLAk~mi~l~g~~~~~dI~I~~~GlRpGE 514 (588)
T COG1086 449 RFFMTIPEAVQLVLQAGAIAKGGEIFVLDMGEPVKIIDLAKAMIELAGQTPPGDIAIKIIGLRPGE 514 (588)
T ss_pred eEEEEHHHHHHHHHHHHhhcCCCcEEEEcCCCCeEHHHHHHHHHHHhCCCCCCCCCeEEEecCCch
Confidence 99999999998 799999988999999999999999997 33455555444443
|
|
| >PRK05865 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-32 Score=267.87 Aligned_cols=245 Identities=19% Similarity=0.218 Sum_probs=187.8
Q ss_pred CeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCCCE
Q 019795 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKFEA 84 (335)
Q Consensus 5 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~d~ 84 (335)
|+|+|||||||||++++++|+++|++|++++|+.... + ..++.++.+|++|.+++.++++ ++|+
T Consensus 1 MkILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~~------~--------~~~v~~v~gDL~D~~~l~~al~--~vD~ 64 (854)
T PRK05865 1 MRIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPDS------W--------PSSADFIAADIRDATAVESAMT--GADV 64 (854)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCchhh------c--------ccCceEEEeeCCCHHHHHHHHh--CCCE
Confidence 4799999999999999999999999999999864321 0 1357889999999999999998 7999
Q ss_pred EEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccCCCCCCCccCCCCCCCCChhHHhHHHHH
Q 019795 85 VIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQWCE 164 (335)
Q Consensus 85 vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~Y~~sK~~~E 164 (335)
|||+|+.... .+++|+.++.+++++|++.+++++|++||.+ |..+|
T Consensus 65 VVHlAa~~~~---------~~~vNv~GT~nLLeAa~~~gvkr~V~iSS~~-------------------------K~aaE 110 (854)
T PRK05865 65 VAHCAWVRGR---------NDHINIDGTANVLKAMAETGTGRIVFTSSGH-------------------------QPRVE 110 (854)
T ss_pred EEECCCcccc---------hHHHHHHHHHHHHHHHHHcCCCeEEEECCcH-------------------------HHHHH
Confidence 9999986321 4678999999999999999999999999842 88889
Q ss_pred HHHHHHHhhCCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHHHhCCCCceeEecccCCCCCCceeeeeeeHh
Q 019795 165 EIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAVRDYIHVM 244 (335)
Q Consensus 165 ~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~v~~~ 244 (335)
+++.. + +++++++||+++||++. . .++.... . .+ +...| ++...++|+|++
T Consensus 111 ~ll~~----~-gl~~vILRp~~VYGP~~------------~---~~i~~ll-~-~~-v~~~G------~~~~~~dfIhVd 161 (854)
T PRK05865 111 QMLAD----C-GLEWVAVRCALIFGRNV------------D---NWVQRLF-A-LP-VLPAG------YADRVVQVVHSD 161 (854)
T ss_pred HHHHH----c-CCCEEEEEeceEeCCCh------------H---HHHHHHh-c-Cc-eeccC------CCCceEeeeeHH
Confidence 88753 3 89999999999999841 1 1222222 1 12 22233 456678999999
Q ss_pred hhhc-----------cCceEEecCCccccHHHHHHHHHHHhC---CCCCceeCCCC--CCccceeeccHHHHHHhcCCcc
Q 019795 245 DLAD-----------GCIAYNLGNGKGISVLEMVAAFEKASG---KKIPIKFCPRR--VGDATAVYAATDKAHKELGWKP 308 (335)
Q Consensus 245 D~~~-----------~~~~~nv~~~~~~s~~el~~~i~~~~g---~~~~~~~~~~~--~~~~~~~~~d~~k~~~~Lg~~p 308 (335)
|+++ .+++||+++++.+|+.|+++.+.+... .+......+.. ........+|++|+++.|||+|
T Consensus 162 DVA~Ai~~aL~~~~~~ggvyNIgsg~~~Si~EIae~l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~D~sKar~~LGw~P 241 (854)
T PRK05865 162 DAQRLLVRALLDTVIDSGPVNLAAPGELTFRRIAAALGRPMVPIGSPVLRRVTSFAELELLHSAPLMDVTLLRDRWGFQP 241 (854)
T ss_pred HHHHHHHHHHhCCCcCCCeEEEECCCcccHHHHHHHHhhhhccCCchhhhhccchhhhhcccCCccCCHHHHHHHhCCCC
Confidence 9997 257999999999999999999987542 11111111100 0111244689999999999999
Q ss_pred ccCHHHHHHHHHHHHhcCCC
Q 019795 309 KYGIEDMCAHQWNWAKNNPM 328 (335)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~ 328 (335)
+++++++|+++++|++.+..
T Consensus 242 ~~sLeeGL~dti~~~r~ri~ 261 (854)
T PRK05865 242 AWNAEECLEDFTLAVRGRIG 261 (854)
T ss_pred CCCHHHHHHHHHHHHHhhcc
Confidence 99999999999999987543
|
|
| >PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-33 Score=237.90 Aligned_cols=248 Identities=27% Similarity=0.429 Sum_probs=182.8
Q ss_pred EEEEcCCChhhHHHHHHHHhCC-CeEEEEecCCCCchhhHHhhhhhcCC-ccccceeEEEccCCCHHHHHHHHhcCCCCE
Q 019795 7 ILVTGGAGFIGTHCALQLLQGG-FKVVLIDNLHNSVPEAVDRVKDLAGP-ELAKKLEFHVGDLRNKDDLDKLFSSQKFEA 84 (335)
Q Consensus 7 vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~Dl~d~~~~~~~~~~~~~d~ 84 (335)
||||||+|.||+.|+++|++.+ ..++++++++........++....+. .....+.++.+|++|.+.+..+++..+||+
T Consensus 1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~~pdi 80 (293)
T PF02719_consen 1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEYKPDI 80 (293)
T ss_dssp EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT--T-SE
T ss_pred CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhcCCCE
Confidence 7999999999999999999987 57999999888777777666433321 111123456899999999999999999999
Q ss_pred EEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccCCCCCCCccCCCCCCCCChhHHhHHHHH
Q 019795 85 VIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQWCE 164 (335)
Q Consensus 85 vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~Y~~sK~~~E 164 (335)
|||+||..++...+.+|.+.+++|+.||.|++++|.+++++++|++||.- ..+|.+.||.||..+|
T Consensus 81 VfHaAA~KhVpl~E~~p~eav~tNv~GT~nv~~aa~~~~v~~~v~ISTDK--------------Av~PtnvmGatKrlaE 146 (293)
T PF02719_consen 81 VFHAAALKHVPLMEDNPFEAVKTNVLGTQNVAEAAIEHGVERFVFISTDK--------------AVNPTNVMGATKRLAE 146 (293)
T ss_dssp EEE------HHHHCCCHHHHHHHHCHHHHHHHHHHHHTT-SEEEEEEECG--------------CSS--SHHHHHHHHHH
T ss_pred EEEChhcCCCChHHhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccc--------------cCCCCcHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999965 3568899999999999
Q ss_pred HHHHHHHhhC--CCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHHHhCCCCceeEecccCCCCCCceeeeeee
Q 019795 165 EIAFDVQKAD--PEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAVRDYIH 242 (335)
Q Consensus 165 ~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~v~ 242 (335)
+++..+.... .+..++++|+|||.|.+. ..+|.+.+-...+.| +++. +.+.+|-|+.
T Consensus 147 ~l~~~~~~~~~~~~t~f~~VRFGNVlgS~G-------------SVip~F~~Qi~~g~P-lTvT-------~p~mtRffmt 205 (293)
T PF02719_consen 147 KLVQAANQYSGNSDTKFSSVRFGNVLGSRG-------------SVIPLFKKQIKNGGP-LTVT-------DPDMTRFFMT 205 (293)
T ss_dssp HHHHHHCCTSSSS--EEEEEEE-EETTGTT-------------SCHHHHHHHHHTTSS-EEEC-------ETT-EEEEE-
T ss_pred HHHHHHhhhCCCCCcEEEEEEecceecCCC-------------cHHHHHHHHHHcCCc-ceeC-------CCCcEEEEec
Confidence 9999887653 357899999999999842 277876666655566 6664 5788899999
Q ss_pred Hhhhhc----------cCceEEecCCccccHHHHHHHHHHHhCC------CCCceeCCCCCCc
Q 019795 243 VMDLAD----------GCIAYNLGNGKGISVLEMVAAFEKASGK------KIPIKFCPRRVGD 289 (335)
Q Consensus 243 ~~D~~~----------~~~~~nv~~~~~~s~~el~~~i~~~~g~------~~~~~~~~~~~~~ 289 (335)
++++++ ++++|.+-.|+++++.|+++.+.+..|. ++++.+...++++
T Consensus 206 i~EAv~Lvl~a~~~~~~geifvl~mg~~v~I~dlA~~~i~~~g~~~~~~~~i~I~~~GlRpGE 268 (293)
T PF02719_consen 206 IEEAVQLVLQAAALAKGGEIFVLDMGEPVKILDLAEAMIELSGLEPGKKPDIPIKFTGLRPGE 268 (293)
T ss_dssp HHHHHHHHHHHHHH--TTEEEEE---TCEECCCHHHHHHHHTT-EEEESSSS-EEE----TT-
T ss_pred HHHHHHHHHHHHhhCCCCcEEEecCCCCcCHHHHHHHHHhhcccccccCCCcceEEcCCCCCc
Confidence 999987 6889999889999999999999999974 4566666666654
|
The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A. |
| >TIGR01777 yfcH conserved hypothetical protein TIGR01777 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-32 Score=245.32 Aligned_cols=267 Identities=19% Similarity=0.164 Sum_probs=188.9
Q ss_pred EEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCCCEEE
Q 019795 7 ILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKFEAVI 86 (335)
Q Consensus 7 vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~d~vi 86 (335)
|||||||||||+++++.|+++|++|++++|+......... .. ..|+.. ..+.+.+. ++|+||
T Consensus 1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-----------~~----~~~~~~-~~~~~~~~--~~D~Vv 62 (292)
T TIGR01777 1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTKW-----------EG----YKPWAP-LAESEALE--GADAVI 62 (292)
T ss_pred CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCcccc-----------ee----eecccc-cchhhhcC--CCCEEE
Confidence 6899999999999999999999999999997665321100 01 112222 23344555 799999
Q ss_pred Ecccccchh--hhhcChHHHHHHhHHHHHHHHHHHHHcCCC--EEEEeccccccCCCCCCCccCCCCCCCCChhHHhHHH
Q 019795 87 HFGALKAVA--ESVQHPFRYFDNNLIGTINLYQAMAKYNCK--KLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQW 162 (335)
Q Consensus 87 ~~a~~~~~~--~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~--~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~Y~~sK~~ 162 (335)
|+|+..... .....+..++++|+.++.+++++|++.+++ ++|+.||.++||.....+++|+.+..+.+.|+..+..
T Consensus 63 h~a~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~i~~S~~~~yg~~~~~~~~E~~~~~~~~~~~~~~~~ 142 (292)
T TIGR01777 63 NLAGEPIADKRWTEERKQEIRDSRIDTTRALVEAIAAAEQKPKVFISASAVGYYGTSEDRVFTEEDSPAGDDFLAELCRD 142 (292)
T ss_pred ECCCCCcccccCCHHHHHHHHhcccHHHHHHHHHHHhcCCCceEEEEeeeEEEeCCCCCCCcCcccCCCCCChHHHHHHH
Confidence 999975321 122344578899999999999999999863 5667777788997766788888866666667777766
Q ss_pred HHHHHHHHHhhCCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHHHhCCCCceeEecccCCCCCCceeeeeee
Q 019795 163 CEEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAVRDYIH 242 (335)
Q Consensus 163 ~E~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~v~ 242 (335)
.|..+..+. +. +++++++||+++||+... ..+.+......... ..+| ++++.++|+|
T Consensus 143 ~e~~~~~~~-~~-~~~~~ilR~~~v~G~~~~-------------~~~~~~~~~~~~~~--~~~g------~~~~~~~~i~ 199 (292)
T TIGR01777 143 WEEAAQAAE-DL-GTRVVLLRTGIVLGPKGG-------------ALAKMLPPFRLGLG--GPLG------SGRQWFSWIH 199 (292)
T ss_pred HHHHhhhch-hc-CCceEEEeeeeEECCCcc-------------hhHHHHHHHhcCcc--cccC------CCCcccccEe
Confidence 777665433 33 899999999999998421 12222211111111 1134 6888999999
Q ss_pred Hhhhhc----------cCceEEecCCccccHHHHHHHHHHHhCCCCCceeCCCCC---------C-ccceeeccHHHHHH
Q 019795 243 VMDLAD----------GCIAYNLGNGKGISVLEMVAAFEKASGKKIPIKFCPRRV---------G-DATAVYAATDKAHK 302 (335)
Q Consensus 243 ~~D~~~----------~~~~~nv~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~---------~-~~~~~~~d~~k~~~ 302 (335)
++|+++ ..++||+++++.+|+.|+++.|.+.+|.+..+. .|.+. . -..+...+++|++
T Consensus 200 v~Dva~~i~~~l~~~~~~g~~~~~~~~~~s~~di~~~i~~~~g~~~~~~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~- 277 (292)
T TIGR01777 200 IEDLVQLILFALENASISGPVNATAPEPVRNKEFAKALARALHRPAFFP-VPAFVLRALLGEMADLLLKGQRVLPEKLL- 277 (292)
T ss_pred HHHHHHHHHHHhcCcccCCceEecCCCccCHHHHHHHHHHHhCCCCcCc-CCHHHHHHHhchhhHHHhCCcccccHHHH-
Confidence 999998 356899999999999999999999999764332 22211 1 1246678899996
Q ss_pred hcCCcccc-CHHHHH
Q 019795 303 ELGWKPKY-GIEDMC 316 (335)
Q Consensus 303 ~Lg~~p~~-~~~~~~ 316 (335)
.|||+|++ ++++++
T Consensus 278 ~~g~~~~~~~~~~~~ 292 (292)
T TIGR01777 278 EAGFQFQYPDLDEAL 292 (292)
T ss_pred hcCCeeeCcChhhcC
Confidence 59999999 588764
|
This model represents a clade of proteins of unknown function including the E. coli yfcH protein. |
| >PLN02996 fatty acyl-CoA reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-32 Score=254.46 Aligned_cols=258 Identities=18% Similarity=0.197 Sum_probs=187.3
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCC---CeEEEEecCCCCchhhHHhhh-------------hhcCC----cccccee
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGG---FKVVLIDNLHNSVPEAVDRVK-------------DLAGP----ELAKKLE 61 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~~~~~~-------------~~~~~----~~~~~i~ 61 (335)
.++|+|+|||||||||++|++.|++.+ -+|+++.|..... ....++. +..+. ....++.
T Consensus 9 ~~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~-~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~ 87 (491)
T PLN02996 9 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAK-SATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVT 87 (491)
T ss_pred hCCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCC-CHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEE
Confidence 578999999999999999999999864 3578888865432 2222221 10000 0125789
Q ss_pred EEEccCC-------CHHHHHHHHhcCCCCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHc-CCCEEEEeccc
Q 019795 62 FHVGDLR-------NKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKY-NCKKLVFSSSA 133 (335)
Q Consensus 62 ~~~~Dl~-------d~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~-~~~~~v~~Ss~ 133 (335)
++.+|++ +.+.+.++++ ++|+|||+|+.... ..++...+++|+.|+.+++++|++. +++++||+||+
T Consensus 88 ~i~GDl~~~~LGLs~~~~~~~l~~--~vD~ViH~AA~v~~---~~~~~~~~~~Nv~gt~~ll~~a~~~~~~k~~V~vST~ 162 (491)
T PLN02996 88 PVPGDISYDDLGVKDSNLREEMWK--EIDIVVNLAATTNF---DERYDVALGINTLGALNVLNFAKKCVKVKMLLHVSTA 162 (491)
T ss_pred EEecccCCcCCCCChHHHHHHHHh--CCCEEEECccccCC---cCCHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeee
Confidence 9999998 4455777887 79999999998643 2456788999999999999999986 68899999999
Q ss_pred cccCCCCC----CCccCCC-----------------------------------------------CCCCCChhHHhHHH
Q 019795 134 TIYGQPEK----IPCVEDF-----------------------------------------------PYGAMNPYGRTKQW 162 (335)
Q Consensus 134 ~vyg~~~~----~~~~e~~-----------------------------------------------~~~~~~~Y~~sK~~ 162 (335)
++||.... .++++.. ...+.+.|+.||++
T Consensus 163 ~vyG~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pn~Y~~TK~~ 242 (491)
T PLN02996 163 YVCGEKSGLILEKPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAKLHGWPNTYVFTKAM 242 (491)
T ss_pred EEecCCCceeeeecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhHHHhCCCCCchHhhHHH
Confidence 99986421 1111000 11234679999999
Q ss_pred HHHHHHHHHhhCCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHHHhCCCCceeEecccCCCCCCceeeeeee
Q 019795 163 CEEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAVRDYIH 242 (335)
Q Consensus 163 ~E~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~v~ 242 (335)
+|+++..+.. +++++++||++|||+...+..|+..+. .....++..+..|.. ..++| ++++.+||+|
T Consensus 243 aE~lv~~~~~---~lpv~i~RP~~V~G~~~~p~~gwi~~~--~~~~~i~~~~~~g~~--~~~~g------dg~~~~D~v~ 309 (491)
T PLN02996 243 GEMLLGNFKE---NLPLVIIRPTMITSTYKEPFPGWIEGL--RTIDSVIVGYGKGKL--TCFLA------DPNSVLDVIP 309 (491)
T ss_pred HHHHHHHhcC---CCCEEEECCCEeccCCcCCCCCcccch--hhHHHHHHHhccceE--eEEec------CCCeecceec
Confidence 9999987643 899999999999999765544433221 112223333334433 35677 8999999999
Q ss_pred Hhhhhc-------c-------CceEEecCC--ccccHHHHHHHHHHHhCCCC
Q 019795 243 VMDLAD-------G-------CIAYNLGNG--KGISVLEMVAAFEKASGKKI 278 (335)
Q Consensus 243 ~~D~~~-------~-------~~~~nv~~~--~~~s~~el~~~i~~~~g~~~ 278 (335)
|+|+++ . +++||++++ +++|+.|+++.+.+.++..+
T Consensus 310 Vddvv~a~l~a~~~~~~~~~~~~vYNi~s~~~~~~s~~ei~~~~~~~~~~~p 361 (491)
T PLN02996 310 ADMVVNAMIVAMAAHAGGQGSEIIYHVGSSLKNPVKFSNLHDFAYRYFSKNP 361 (491)
T ss_pred ccHHHHHHHHHHHHhhccCCCCcEEEecCCCCCcccHHHHHHHHHHHhhhCC
Confidence 999987 1 358999998 89999999999999887443
|
|
| >PLN02778 3,5-epimerase/4-reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-31 Score=235.96 Aligned_cols=262 Identities=17% Similarity=0.162 Sum_probs=187.3
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCC
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKF 82 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~ 82 (335)
+.|+||||||+||||++|+++|+++|++|+... .|+.|.+.+...++..++
T Consensus 8 ~~~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~-----------------------------~~~~~~~~v~~~l~~~~~ 58 (298)
T PLN02778 8 ATLKFLIYGKTGWIGGLLGKLCQEQGIDFHYGS-----------------------------GRLENRASLEADIDAVKP 58 (298)
T ss_pred CCCeEEEECCCCHHHHHHHHHHHhCCCEEEEec-----------------------------CccCCHHHHHHHHHhcCC
Confidence 347899999999999999999999999987432 133455556666665679
Q ss_pred CEEEEcccccchh---hhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccCCCC------CCCccCCCCCC-C
Q 019795 83 EAVIHFGALKAVA---ESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQPE------KIPCVEDFPYG-A 152 (335)
Q Consensus 83 d~vi~~a~~~~~~---~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~------~~~~~e~~~~~-~ 152 (335)
|+|||+|+..... .+..++...+++|+.++.+++++|++.+++ ++++||.++|+... ..+++|++++. +
T Consensus 59 D~ViH~Aa~~~~~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~gv~-~v~~sS~~vy~~~~~~p~~~~~~~~Ee~~p~~~ 137 (298)
T PLN02778 59 THVFNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRERGLV-LTNYATGCIFEYDDAHPLGSGIGFKEEDTPNFT 137 (298)
T ss_pred CEEEECCcccCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCC-EEEEecceEeCCCCCCCcccCCCCCcCCCCCCC
Confidence 9999999986422 245678899999999999999999999885 56678878886432 22467766554 4
Q ss_pred CChhHHhHHHHHHHHHHHHhhCCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHHHhCCCCceeEecccCCCC
Q 019795 153 MNPYGRTKQWCEEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTK 232 (335)
Q Consensus 153 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 232 (335)
.+.|+.||.++|.+++.+. ...++|+..++|++.. ... .++..++.+.. +...+
T Consensus 138 ~s~Yg~sK~~~E~~~~~y~------~~~~lr~~~~~~~~~~---------~~~---~fi~~~~~~~~--~~~~~------ 191 (298)
T PLN02778 138 GSFYSKTKAMVEELLKNYE------NVCTLRVRMPISSDLS---------NPR---NFITKITRYEK--VVNIP------ 191 (298)
T ss_pred CCchHHHHHHHHHHHHHhh------ccEEeeecccCCcccc---------cHH---HHHHHHHcCCC--eeEcC------
Confidence 5899999999999998754 3457888777775311 011 23444444433 22222
Q ss_pred CCceeeeeeeHhhhhc---------cCceEEecCCccccHHHHHHHHHHHhCCCCC---ceeCCC---CCCccceeeccH
Q 019795 233 DGSAVRDYIHVMDLAD---------GCIAYNLGNGKGISVLEMVAAFEKASGKKIP---IKFCPR---RVGDATAVYAAT 297 (335)
Q Consensus 233 ~~~~~~~~v~~~D~~~---------~~~~~nv~~~~~~s~~el~~~i~~~~g~~~~---~~~~~~---~~~~~~~~~~d~ 297 (335)
.+|+|++|+++ .+++||+++++.+|++|+++.+++.++.... +...+. ......+..+|+
T Consensus 192 -----~s~~yv~D~v~al~~~l~~~~~g~yNigs~~~iS~~el~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Ld~ 266 (298)
T PLN02778 192 -----NSMTILDELLPISIEMAKRNLTGIYNFTNPGVVSHNEILEMYRDYIDPSFTWKNFTLEEQAKVIVAPRSNNELDT 266 (298)
T ss_pred -----CCCEEHHHHHHHHHHHHhCCCCCeEEeCCCCcccHHHHHHHHHHHhCCCceeccccHHHHHHHHhCCCccccccH
Confidence 37999999985 2369999999999999999999999995421 111111 011112337999
Q ss_pred HHHHHhcCCccccCHHHHHHHHHHHHhcC
Q 019795 298 DKAHKELGWKPKYGIEDMCAHQWNWAKNN 326 (335)
Q Consensus 298 ~k~~~~Lg~~p~~~~~~~~~~~~~~~~~~ 326 (335)
+|+++.++=.+. ..+++++..++-++..
T Consensus 267 ~k~~~~~~~~~~-~~~~~~~~~~~~~~~~ 294 (298)
T PLN02778 267 TKLKREFPELLP-IKESLIKYVFEPNKKT 294 (298)
T ss_pred HHHHHhcccccc-hHHHHHHHHHHHHHhh
Confidence 999999875455 6788898888887554
|
|
| >PRK07201 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-31 Score=262.73 Aligned_cols=297 Identities=21% Similarity=0.264 Sum_probs=209.9
Q ss_pred CeEEEEcCCChhhHHHHHHHH--hCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCH------HHHHHH
Q 019795 5 KNILVTGGAGFIGTHCALQLL--QGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNK------DDLDKL 76 (335)
Q Consensus 5 ~~vlItGatG~iG~~l~~~L~--~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~------~~~~~~ 76 (335)
|+|||||||||||++|+++|+ +.|++|++++|+... . ....+....+ ..+++++.+|++|+ +.+.++
T Consensus 1 m~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~-~-~~~~~~~~~~---~~~v~~~~~Dl~~~~~~~~~~~~~~l 75 (657)
T PRK07201 1 MRYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSL-S-RLEALAAYWG---ADRVVPLVGDLTEPGLGLSEADIAEL 75 (657)
T ss_pred CeEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchH-H-HHHHHHHhcC---CCcEEEEecccCCccCCcCHHHHHHh
Confidence 489999999999999999999 579999999995322 1 1111111100 14688999999983 455555
Q ss_pred HhcCCCCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccCCCCCCCccCCCC---CCCC
Q 019795 77 FSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQPEKIPCVEDFP---YGAM 153 (335)
Q Consensus 77 ~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~---~~~~ 153 (335)
+ ++|+|||+|+.... ........++|+.++.+++++|++.+++++||+||..+||.... +.+|+.. ..+.
T Consensus 76 -~--~~D~Vih~Aa~~~~---~~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~~SS~~v~g~~~~-~~~e~~~~~~~~~~ 148 (657)
T PRK07201 76 -G--DIDHVVHLAAIYDL---TADEEAQRAANVDGTRNVVELAERLQAATFHHVSSIAVAGDYEG-VFREDDFDEGQGLP 148 (657)
T ss_pred -c--CCCEEEECceeecC---CCCHHHHHHHHhHHHHHHHHHHHhcCCCeEEEEeccccccCccC-ccccccchhhcCCC
Confidence 4 89999999997432 23345678899999999999999998899999999999986532 3445432 3345
Q ss_pred ChhHHhHHHHHHHHHHHHhhCCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHHHhCCCCceeEecccCCCCC
Q 019795 154 NPYGRTKQWCEEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKD 233 (335)
Q Consensus 154 ~~Y~~sK~~~E~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 233 (335)
+.|+.+|..+|+++++ .. +++++++||++|||+...+...... ....+.+.+... ......+++.+ +
T Consensus 149 ~~Y~~sK~~~E~~~~~---~~-g~~~~ilRp~~v~G~~~~g~~~~~~--~~~~~~~~~~~~-~~~~~~~~~~~------~ 215 (657)
T PRK07201 149 TPYHRTKFEAEKLVRE---EC-GLPWRVYRPAVVVGDSRTGEMDKID--GPYYFFKVLAKL-AKLPSWLPMVG------P 215 (657)
T ss_pred CchHHHHHHHHHHHHH---cC-CCcEEEEcCCeeeecCCCCccccCC--cHHHHHHHHHHh-ccCCccccccc------C
Confidence 6799999999999864 23 8999999999999986432111000 011122333332 11111133344 4
Q ss_pred CceeeeeeeHhhhhc-----------cCceEEecCCccccHHHHHHHHHHHhCCCC---CceeCCCCC-----C------
Q 019795 234 GSAVRDYIHVMDLAD-----------GCIAYNLGNGKGISVLEMVAAFEKASGKKI---PIKFCPRRV-----G------ 288 (335)
Q Consensus 234 ~~~~~~~v~~~D~~~-----------~~~~~nv~~~~~~s~~el~~~i~~~~g~~~---~~~~~~~~~-----~------ 288 (335)
+...++++|++|+++ .+++||+++++++|+.|+++.+.+.+|.+. +....|... .
T Consensus 216 ~~~~~~~v~vddva~ai~~~~~~~~~~g~~~ni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~p~~~~~~~~~~~~~~~ 295 (657)
T PRK07201 216 DGGRTNIVPVDYVADALDHLMHKDGRDGQTFHLTDPKPQRVGDIYNAFARAAGAPPDARLFGFLPGFVAAPLLAALGPVR 295 (657)
T ss_pred CCCeeeeeeHHHHHHHHHHHhcCcCCCCCEEEeCCCCCCcHHHHHHHHHHHhCCCccccccccCChHHHHHHhhhcchhh
Confidence 556789999999987 367999999999999999999999999776 333333210 0
Q ss_pred -------------------ccceeeccHHHHHHhc---CCccccCHHHHHHHHHHHHhcCC
Q 019795 289 -------------------DATAVYAATDKAHKEL---GWKPKYGIEDMCAHQWNWAKNNP 327 (335)
Q Consensus 289 -------------------~~~~~~~d~~k~~~~L---g~~p~~~~~~~~~~~~~~~~~~~ 327 (335)
-.....+|++|+++.| |+... .+.+.+...++|+.++.
T Consensus 296 ~~~~~~~~~~~~~~~~l~~~~~~~~f~~~~~~~~L~~~~~~~p-~~~~~~~~~~~~~~~~~ 355 (657)
T PRK07201 296 RLRNAVATQLGIPPEVLDFVNYPTTFDSRETRAALKGSGIEVP-RLASYAPRLWDYWERHL 355 (657)
T ss_pred HHHHHHHHhcCCCHHHHHhccCCCeeccHHHHHHhccCCcCCC-ChHHHHHHHHHHHHhcC
Confidence 0124578999999998 55555 78899999999887764
|
|
| >PLN02583 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-31 Score=234.55 Aligned_cols=269 Identities=16% Similarity=0.060 Sum_probs=189.1
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCC
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKF 82 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~ 82 (335)
++|+|||||||||||++++++|+++|++|+++.|+.... .....+..... ...++.++.+|++|.+++.+++. ++
T Consensus 5 ~~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~-~~~~~~~~l~~--~~~~~~~~~~Dl~d~~~~~~~l~--~~ 79 (297)
T PLN02583 5 SSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGET-EIEKEIRGLSC--EEERLKVFDVDPLDYHSILDALK--GC 79 (297)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchhh-hHHHHHHhccc--CCCceEEEEecCCCHHHHHHHHc--CC
Confidence 468999999999999999999999999999998853321 11111121110 01468889999999999999998 78
Q ss_pred CEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHc-CCCEEEEecccccc--CCC---CCCCccCCCCCCCC---
Q 019795 83 EAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKY-NCKKLVFSSSATIY--GQP---EKIPCVEDFPYGAM--- 153 (335)
Q Consensus 83 d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~-~~~~~v~~Ss~~vy--g~~---~~~~~~e~~~~~~~--- 153 (335)
|.|+|+++..... ...++.++++|+.++.+++++|.+. +++++|++||.+.+ +.. ...+++|+.+..+.
T Consensus 80 d~v~~~~~~~~~~--~~~~~~~~~~nv~gt~~ll~aa~~~~~v~riV~~SS~~a~~~~~~~~~~~~~~~E~~~~~~~~~~ 157 (297)
T PLN02583 80 SGLFCCFDPPSDY--PSYDEKMVDVEVRAAHNVLEACAQTDTIEKVVFTSSLTAVIWRDDNISTQKDVDERSWSDQNFCR 157 (297)
T ss_pred CEEEEeCccCCcc--cccHHHHHHHHHHHHHHHHHHHHhcCCccEEEEecchHheecccccCCCCCCCCcccCCCHHHHh
Confidence 9999987653221 1235688999999999999999886 57899999998764 311 12356776543222
Q ss_pred ---ChhHHhHHHHHHHHHHHHhhCCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHHHhCCCCceeEecccCC
Q 019795 154 ---NPYGRTKQWCEEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYP 230 (335)
Q Consensus 154 ---~~Y~~sK~~~E~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 230 (335)
..|+.||.++|++++.+.+.. +++++++||++||||.... ..+ .+.+.. ...+
T Consensus 158 ~~~~~Y~~sK~~aE~~~~~~~~~~-gi~~v~lrp~~v~Gp~~~~------------~~~----~~~~~~---~~~~---- 213 (297)
T PLN02583 158 KFKLWHALAKTLSEKTAWALAMDR-GVNMVSINAGLLMGPSLTQ------------HNP----YLKGAA---QMYE---- 213 (297)
T ss_pred hcccHHHHHHHHHHHHHHHHHHHh-CCcEEEEcCCcccCCCCCC------------chh----hhcCCc---ccCc----
Confidence 269999999999999888777 9999999999999985321 001 111211 1211
Q ss_pred CCCCceeeeeeeHhhhhc----------cCceEEecCCccccHHHHHHHHHHHhCCCCCceeC-CCCCCccceeeccHHH
Q 019795 231 TKDGSAVRDYIHVMDLAD----------GCIAYNLGNGKGISVLEMVAAFEKASGKKIPIKFC-PRRVGDATAVYAATDK 299 (335)
Q Consensus 231 ~~~~~~~~~~v~~~D~~~----------~~~~~nv~~~~~~s~~el~~~i~~~~g~~~~~~~~-~~~~~~~~~~~~d~~k 299 (335)
...++|||++|+|+ .++.|+++++....+.++++.+.+.++.- ++... .....+.....++++|
T Consensus 214 ----~~~~~~v~V~Dva~a~~~al~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~p~~-~~~~~~~~~~~~~~~~~~~~~k 288 (297)
T PLN02583 214 ----NGVLVTVDVNFLVDAHIRAFEDVSSYGRYLCFNHIVNTEEDAVKLAQMLSPLI-PSPPPYEMQGSEVYQQRIRNKK 288 (297)
T ss_pred ----ccCcceEEHHHHHHHHHHHhcCcccCCcEEEecCCCccHHHHHHHHHHhCCCC-CCCCcccccCCCccccccChHH
Confidence 22467999999998 45578887665566788999999987632 22110 1111223456789999
Q ss_pred HHHhcCCcc
Q 019795 300 AHKELGWKP 308 (335)
Q Consensus 300 ~~~~Lg~~p 308 (335)
+ +.||++.
T Consensus 289 ~-~~l~~~~ 296 (297)
T PLN02583 289 L-NKLMEDF 296 (297)
T ss_pred H-HHhCccc
Confidence 9 5799875
|
|
| >KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.2e-31 Score=215.89 Aligned_cols=307 Identities=25% Similarity=0.326 Sum_probs=245.3
Q ss_pred CeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCc---cccceeEEEccCCCHHHHHHHHhcCC
Q 019795 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPE---LAKKLEFHVGDLRNKDDLDKLFSSQK 81 (335)
Q Consensus 5 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~---~~~~i~~~~~Dl~d~~~~~~~~~~~~ 81 (335)
|.+||||-||.-|++|++.|+..||+|+++-|..++. ...++.++...+ .......+.+|++|...+.++++...
T Consensus 29 kvALITGItGQDGSYLaEfLL~KgYeVHGiiRRsSsF--NT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~~ik 106 (376)
T KOG1372|consen 29 KVALITGITGQDGSYLAEFLLSKGYEVHGIIRRSSSF--NTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLISTIK 106 (376)
T ss_pred eEEEEecccCCCchHHHHHHHhCCceeeEEEeecccc--chhhhhhhhcCchhcccceeEEeeccccchHHHHHHHhccC
Confidence 6899999999999999999999999999988865543 344555544311 23568899999999999999999999
Q ss_pred CCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCC---EEEEeccccccCCCCCCCccCCCCCCCCChhHH
Q 019795 82 FEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCK---KLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGR 158 (335)
Q Consensus 82 ~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~---~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~Y~~ 158 (335)
|+-|+|+|+..++..+.+.++.+-++...|+++|+++.+.++.. +|-..||+..||.....|..|..|..|.++|+.
T Consensus 107 PtEiYnLaAQSHVkvSFdlpeYTAeVdavGtLRlLdAi~~c~l~~~VrfYQAstSElyGkv~e~PQsE~TPFyPRSPYa~ 186 (376)
T KOG1372|consen 107 PTEVYNLAAQSHVKVSFDLPEYTAEVDAVGTLRLLDAIRACRLTEKVRFYQASTSELYGKVQEIPQSETTPFYPRSPYAA 186 (376)
T ss_pred chhhhhhhhhcceEEEeecccceeeccchhhhhHHHHHHhcCcccceeEEecccHhhcccccCCCcccCCCCCCCChhHH
Confidence 99999999999999999999999999999999999999988642 788999999999988889999999999999999
Q ss_pred hHHHHHHHHHHHHhhCCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHHHhCCCCceeEecccCCCCCCceee
Q 019795 159 TKQWCEEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAVR 238 (335)
Q Consensus 159 sK~~~E~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 238 (335)
+|..+-+++-.+.+.+ ++-.+---.+ .|.++..|+.. ..+.+...+.++..|++. -.-.| +=+..|
T Consensus 187 aKmy~~WivvNyREAY-nmfAcNGILF----NHESPRRGenF--VTRKItRsvakI~~gqqe-~~~LG------NL~a~R 252 (376)
T KOG1372|consen 187 AKMYGYWIVVNYREAY-NMFACNGILF----NHESPRRGENF--VTRKITRSVAKISLGQQE-KIELG------NLSALR 252 (376)
T ss_pred hhhhheEEEEEhHHhh-cceeeccEee----cCCCCccccch--hhHHHHHHHHHhhhccee-eEEec------chhhhc
Confidence 9999999988888777 5433322122 25555555433 356677778888888776 33466 456779
Q ss_pred eeeeHhhhhc---------cCceEEecCCccccHHHHHHHHHHHhCCCCCc------------------ee--CCCCCCc
Q 019795 239 DYIHVMDLAD---------GCIAYNLGNGKGISVLEMVAAFEKASGKKIPI------------------KF--CPRRVGD 289 (335)
Q Consensus 239 ~~v~~~D~~~---------~~~~~nv~~~~~~s~~el~~~i~~~~g~~~~~------------------~~--~~~~~~~ 289 (335)
||=|..|-++ ....|.|++++..|++|+++.....+|..... .. .-.+|.+
T Consensus 253 DWGhA~dYVEAMW~mLQ~d~PdDfViATge~hsVrEF~~~aF~~ig~~l~Weg~gv~~~~~n~~g~v~V~v~~kYyRPtE 332 (376)
T KOG1372|consen 253 DWGHAGDYVEAMWLMLQQDSPDDFVIATGEQHSVREFCNLAFAEIGEVLNWEGEGVDEVGKNDDGVVRVKVDPKYYRPTE 332 (376)
T ss_pred ccchhHHHHHHHHHHHhcCCCCceEEecCCcccHHHHHHHHHHhhCcEEeecccccccccccCCceEEEEecccccCcch
Confidence 9999999887 57789999999999999999999988733211 11 1235667
Q ss_pred cceeeccHHHHHHhcCCccccCHHHHHHHHHH----HHhcCC
Q 019795 290 ATAVYAATDKAHKELGWKPKYGIEDMCAHQWN----WAKNNP 327 (335)
Q Consensus 290 ~~~~~~d~~k~~~~Lg~~p~~~~~~~~~~~~~----~~~~~~ 327 (335)
.+.+..|.+|+++.|||+|+.++.+.+++++. -+++++
T Consensus 333 Vd~LqGdasKAk~~LgW~pkv~f~eLVkeMv~~DieLm~~np 374 (376)
T KOG1372|consen 333 VDTLQGDASKAKKTLGWKPKVTFPELVKEMVASDIELMKRNP 374 (376)
T ss_pred hhhhcCChHHHHHhhCCCCccCHHHHHHHHHHhHHHHHhhCC
Confidence 78888999999999999999999988888764 455444
|
|
| >PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.3e-29 Score=229.98 Aligned_cols=235 Identities=20% Similarity=0.247 Sum_probs=180.5
Q ss_pred CCCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhh--HHhhhhhcCCccccceeEEEccCCCHHHHHHHHh
Q 019795 1 MASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEA--VDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFS 78 (335)
Q Consensus 1 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~--~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~ 78 (335)
|.++++|||||||||||++++++|+++|++|++++|+....... ...+.. ..++++++.+|++|++++.++++
T Consensus 57 ~~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~-----~~~~v~~v~~Dl~d~~~l~~~~~ 131 (390)
T PLN02657 57 EPKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKK-----ELPGAEVVFGDVTDADSLRKVLF 131 (390)
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhh-----hcCCceEEEeeCCCHHHHHHHHH
Confidence 45788999999999999999999999999999999976432210 011110 01468899999999999999998
Q ss_pred cC--CCCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccCCCCCCCccCCCCCCCCChh
Q 019795 79 SQ--KFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQPEKIPCVEDFPYGAMNPY 156 (335)
Q Consensus 79 ~~--~~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~Y 156 (335)
.. ++|+||||++.... .....+++|+.++.+++++|++.++++||++||.++|+ |...|
T Consensus 132 ~~~~~~D~Vi~~aa~~~~-----~~~~~~~vn~~~~~~ll~aa~~~gv~r~V~iSS~~v~~--------------p~~~~ 192 (390)
T PLN02657 132 SEGDPVDVVVSCLASRTG-----GVKDSWKIDYQATKNSLDAGREVGAKHFVLLSAICVQK--------------PLLEF 192 (390)
T ss_pred HhCCCCcEEEECCccCCC-----CCccchhhHHHHHHHHHHHHHHcCCCEEEEEeeccccC--------------cchHH
Confidence 53 59999999875321 11245678999999999999999999999999987652 34568
Q ss_pred HHhHHHHHHHHHHHHhhCCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHHHhCCCCceeEecccCCCCCCce
Q 019795 157 GRTKQWCEEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSA 236 (335)
Q Consensus 157 ~~sK~~~E~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 236 (335)
..+|...|+.++. ... +++++++||+.+||+ +...+..+..+. + +.++| +|..
T Consensus 193 ~~sK~~~E~~l~~--~~~-gl~~tIlRp~~~~~~----------------~~~~~~~~~~g~-~-~~~~G------dG~~ 245 (390)
T PLN02657 193 QRAKLKFEAELQA--LDS-DFTYSIVRPTAFFKS----------------LGGQVEIVKDGG-P-YVMFG------DGKL 245 (390)
T ss_pred HHHHHHHHHHHHh--ccC-CCCEEEEccHHHhcc----------------cHHHHHhhccCC-c-eEEec------CCcc
Confidence 8999999998865 223 899999999999975 112233333443 4 56677 6766
Q ss_pred ee-eeeeHhhhhc-----------cCceEEecCC-ccccHHHHHHHHHHHhCCCCCceeCCCC
Q 019795 237 VR-DYIHVMDLAD-----------GCIAYNLGNG-KGISVLEMVAAFEKASGKKIPIKFCPRR 286 (335)
Q Consensus 237 ~~-~~v~~~D~~~-----------~~~~~nv~~~-~~~s~~el~~~i~~~~g~~~~~~~~~~~ 286 (335)
.+ ++||++|+++ .+++||++++ +.+|++|+++.+.+.+|+++.+...|.+
T Consensus 246 ~~~~~I~v~DlA~~i~~~~~~~~~~~~~~~Iggp~~~~S~~Eia~~l~~~lG~~~~~~~vp~~ 308 (390)
T PLN02657 246 CACKPISEADLASFIADCVLDESKINKVLPIGGPGKALTPLEQGEMLFRILGKEPKFFKVPIQ 308 (390)
T ss_pred cccCceeHHHHHHHHHHHHhCccccCCEEEcCCCCcccCHHHHHHHHHHHhCCCCceEEcCHH
Confidence 54 6899999986 4689999885 6899999999999999988777666643
|
|
| >COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.8e-29 Score=207.55 Aligned_cols=271 Identities=21% Similarity=0.279 Sum_probs=195.2
Q ss_pred EEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCCCEEE
Q 019795 7 ILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKFEAVI 86 (335)
Q Consensus 7 vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~d~vi 86 (335)
|+|||||||||++|+.+|.+.||+|++++|+++....... ..+. .-+.+.++.+. .+|+||
T Consensus 1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~~~~-----------~~v~-------~~~~~~~~~~~-~~DavI 61 (297)
T COG1090 1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQNLH-----------PNVT-------LWEGLADALTL-GIDAVI 61 (297)
T ss_pred CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchhhhcC-----------cccc-------ccchhhhcccC-CCCEEE
Confidence 6899999999999999999999999999998776543211 1111 11223333332 689999
Q ss_pred Ecccccchh--hhhcChHHHHHHhHHHHHHHHHHHHHc--CCCEEEEeccccccCCCCCCCccCCCCCCCCChhHHhHHH
Q 019795 87 HFGALKAVA--ESVQHPFRYFDNNLIGTINLYQAMAKY--NCKKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQW 162 (335)
Q Consensus 87 ~~a~~~~~~--~~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~Y~~sK~~ 162 (335)
|+||.+... .+.+..+.++++.+..|..|++...+. +.+.+|..|.++.||...+..++|++++.. +.-+.....
T Consensus 62 NLAG~~I~~rrWt~~~K~~i~~SRi~~T~~L~e~I~~~~~~P~~~isaSAvGyYG~~~~~~~tE~~~~g~-~Fla~lc~~ 140 (297)
T COG1090 62 NLAGEPIAERRWTEKQKEEIRQSRINTTEKLVELIAASETKPKVLISASAVGYYGHSGDRVVTEESPPGD-DFLAQLCQD 140 (297)
T ss_pred ECCCCccccccCCHHHHHHHHHHHhHHHHHHHHHHHhccCCCcEEEecceEEEecCCCceeeecCCCCCC-ChHHHHHHH
Confidence 999985432 345566688999999999999998754 567899999999999999999999955443 333333444
Q ss_pred HHHHHHHHHhhCCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHHHhCCCCceeEecccCCCCCCceeeeeee
Q 019795 163 CEEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAVRDYIH 242 (335)
Q Consensus 163 ~E~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~v~ 242 (335)
=|+....+.. .+.+++++|.++|.|+. .+.-..+.|.+..-+-|. .| +|+++.+|||
T Consensus 141 WE~~a~~a~~--~gtRvvllRtGvVLs~~---------GGaL~~m~~~fk~glGG~------~G------sGrQ~~SWIh 197 (297)
T COG1090 141 WEEEALQAQQ--LGTRVVLLRTGVVLSPD---------GGALGKMLPLFKLGLGGK------LG------SGRQWFSWIH 197 (297)
T ss_pred HHHHHhhhhh--cCceEEEEEEEEEecCC---------CcchhhhcchhhhccCCc------cC------CCCceeeeee
Confidence 4555544333 38999999999999973 222334555555433333 23 8999999999
Q ss_pred Hhhhhc----------cCceEEecCCccccHHHHHHHHHHHhCCCCCceeCCC----CCCccceeec-----cHHHHHHh
Q 019795 243 VMDLAD----------GCIAYNLGNGKGISVLEMVAAFEKASGKKIPIKFCPR----RVGDATAVYA-----ATDKAHKE 303 (335)
Q Consensus 243 ~~D~~~----------~~~~~nv~~~~~~s~~el~~~i~~~~g~~~~~~~~~~----~~~~~~~~~~-----d~~k~~~~ 303 (335)
++|+++ ..+.||++++.+|+..++...+.+.++++..+..... ..++....++ -+.|+ ..
T Consensus 198 ieD~v~~I~fll~~~~lsGp~N~taP~PV~~~~F~~al~r~l~RP~~~~vP~~~~rl~LGe~a~~lL~gQrvlP~kl-~~ 276 (297)
T COG1090 198 IEDLVNAILFLLENEQLSGPFNLTAPNPVRNKEFAHALGRALHRPAILPVPSFALRLLLGEMADLLLGGQRVLPKKL-EA 276 (297)
T ss_pred HHHHHHHHHHHHhCcCCCCcccccCCCcCcHHHHHHHHHHHhCCCccccCcHHHHHHHhhhhHHHHhccchhhHHHH-HH
Confidence 999998 4679999999999999999999999997754432221 1223223333 45555 68
Q ss_pred cCCcccc-CHHHHHHHHHH
Q 019795 304 LGWKPKY-GIEDMCAHQWN 321 (335)
Q Consensus 304 Lg~~p~~-~~~~~~~~~~~ 321 (335)
.||+++| ++++++.+.+.
T Consensus 277 aGF~F~y~dl~~AL~~il~ 295 (297)
T COG1090 277 AGFQFQYPDLEEALADILK 295 (297)
T ss_pred CCCeeecCCHHHHHHHHHh
Confidence 9999999 89999998764
|
|
| >PLN02260 probable rhamnose biosynthetic enzyme | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.6e-27 Score=234.66 Aligned_cols=255 Identities=17% Similarity=0.146 Sum_probs=184.3
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCC
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKF 82 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~ 82 (335)
+.|+||||||+||||++|++.|.++|++|.. ..+|++|.+.+..++...++
T Consensus 379 ~~mkiLVtGa~G~iG~~l~~~L~~~g~~v~~-----------------------------~~~~l~d~~~v~~~i~~~~p 429 (668)
T PLN02260 379 PSLKFLIYGRTGWIGGLLGKLCEKQGIAYEY-----------------------------GKGRLEDRSSLLADIRNVKP 429 (668)
T ss_pred CCceEEEECCCchHHHHHHHHHHhCCCeEEe-----------------------------eccccccHHHHHHHHHhhCC
Confidence 3468999999999999999999999988731 11357788888888887789
Q ss_pred CEEEEcccccc---hhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccCCC------CCCCccCCCCCCC-
Q 019795 83 EAVIHFGALKA---VAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQP------EKIPCVEDFPYGA- 152 (335)
Q Consensus 83 d~vi~~a~~~~---~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~------~~~~~~e~~~~~~- 152 (335)
|+|||+|+... ...+..++...+++|+.++.+|+++|++.++ ++|++||.++|+.. ...|++|++++.|
T Consensus 430 d~Vih~Aa~~~~~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~g~-~~v~~Ss~~v~~~~~~~~~~~~~p~~E~~~~~~~ 508 (668)
T PLN02260 430 THVFNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRENGL-LMMNFATGCIFEYDAKHPEGSGIGFKEEDKPNFT 508 (668)
T ss_pred CEEEECCcccCCCCCChHHhCHHHHHHHHhHHHHHHHHHHHHcCC-eEEEEcccceecCCcccccccCCCCCcCCCCCCC
Confidence 99999999863 3334568889999999999999999999998 57788898888632 1347888876655
Q ss_pred CChhHHhHHHHHHHHHHHHhhCCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHHHhCCCCceeEecccCCCC
Q 019795 153 MNPYGRTKQWCEEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTK 232 (335)
Q Consensus 153 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 232 (335)
.+.|+.||.++|++++.+. ...++|+..+||.... + ..+++..+.+ .... +.+.
T Consensus 509 ~~~Yg~sK~~~E~~~~~~~------~~~~~r~~~~~~~~~~---~------~~nfv~~~~~---~~~~-~~vp------- 562 (668)
T PLN02260 509 GSFYSKTKAMVEELLREYD------NVCTLRVRMPISSDLS---N------PRNFITKISR---YNKV-VNIP------- 562 (668)
T ss_pred CChhhHHHHHHHHHHHhhh------hheEEEEEEecccCCC---C------ccHHHHHHhc---ccee-eccC-------
Confidence 4899999999999998753 3457777778875311 0 2234444443 2222 2221
Q ss_pred CCceeeeeeeHhhhhc---------cCceEEecCCccccHHHHHHHHHHHhCC--C-CCc--eeCC--CCCCccceeecc
Q 019795 233 DGSAVRDYIHVMDLAD---------GCIAYNLGNGKGISVLEMVAAFEKASGK--K-IPI--KFCP--RRVGDATAVYAA 296 (335)
Q Consensus 233 ~~~~~~~~v~~~D~~~---------~~~~~nv~~~~~~s~~el~~~i~~~~g~--~-~~~--~~~~--~~~~~~~~~~~d 296 (335)
....+++|++. .+++||+++++.+||+|+++.|.+.++. . .++ ...+ .....+.. .+|
T Consensus 563 -----~~~~~~~~~~~~~~~l~~~~~~giyni~~~~~~s~~e~a~~i~~~~~~~~~~~~~~~~~~~~~~~a~rp~~-~l~ 636 (668)
T PLN02260 563 -----NSMTVLDELLPISIEMAKRNLRGIWNFTNPGVVSHNEILEMYKDYIDPGFKWSNFTLEEQAKVIVAPRSNN-EMD 636 (668)
T ss_pred -----CCceehhhHHHHHHHHHHhCCCceEEecCCCcCcHHHHHHHHHHhcCCcccccccCHHHhhhHhhCCCccc-ccc
Confidence 12345555552 3589999999999999999999998842 1 111 1111 11123344 799
Q ss_pred HHHHHHhcCCccccCHHHHHHHHHH
Q 019795 297 TDKAHKELGWKPKYGIEDMCAHQWN 321 (335)
Q Consensus 297 ~~k~~~~Lg~~p~~~~~~~~~~~~~ 321 (335)
++|+++.+|. +. +|++++.+++.
T Consensus 637 ~~k~~~~~~~-~~-~~~~~l~~~~~ 659 (668)
T PLN02260 637 ASKLKKEFPE-LL-SIKESLIKYVF 659 (668)
T ss_pred HHHHHHhCcc-cc-chHHHHHHHHh
Confidence 9999988998 66 89999998875
|
|
| >PLN02503 fatty acyl-CoA reductase 2 | Back alignment and domain information |
|---|
Probab=99.96 E-value=5e-27 Score=223.30 Aligned_cols=255 Identities=18% Similarity=0.207 Sum_probs=186.7
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCC---eEEEEecCCCCchhhHHhhh-hh------------cCC----cccccee
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGF---KVVLIDNLHNSVPEAVDRVK-DL------------AGP----ELAKKLE 61 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~~-~~------------~~~----~~~~~i~ 61 (335)
+++|+|||||||||||++|++.|++.+. +|+++.|..... ...+++. ++ .+. ....++.
T Consensus 117 ~~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~-~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~ 195 (605)
T PLN02503 117 LRGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKE-AAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLV 195 (605)
T ss_pred hcCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCch-hHHHHHHHHHhhhhhHHHHHHhcCccccccccccEE
Confidence 5689999999999999999999998754 678898865432 2222321 11 110 0125789
Q ss_pred EEEccCCCH------HHHHHHHhcCCCCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHc-CCCEEEEecccc
Q 019795 62 FHVGDLRNK------DDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKY-NCKKLVFSSSAT 134 (335)
Q Consensus 62 ~~~~Dl~d~------~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~-~~~~~v~~Ss~~ 134 (335)
++.+|++++ +..+.+.+ .+|+|||+|+.... ..+++..+++|+.|+.++++.|++. +++++||+||++
T Consensus 196 ~v~GDl~d~~LGLs~~~~~~L~~--~vDiVIH~AA~v~f---~~~~~~a~~vNV~GT~nLLelA~~~~~lk~fV~vSTay 270 (605)
T PLN02503 196 PVVGNVCESNLGLEPDLADEIAK--EVDVIINSAANTTF---DERYDVAIDINTRGPCHLMSFAKKCKKLKLFLQVSTAY 270 (605)
T ss_pred EEEeeCCCcccCCCHHHHHHHHh--cCCEEEECcccccc---ccCHHHHHHHHHHHHHHHHHHHHHcCCCCeEEEccCce
Confidence 999999986 45666666 69999999998643 3456788999999999999999887 468999999999
Q ss_pred ccCCCCCCCccCCCC-----------------------------------------------------------CCCCCh
Q 019795 135 IYGQPEKIPCVEDFP-----------------------------------------------------------YGAMNP 155 (335)
Q Consensus 135 vyg~~~~~~~~e~~~-----------------------------------------------------------~~~~~~ 155 (335)
+||...+ .+.|... ....+.
T Consensus 271 VyG~~~G-~i~E~~y~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~d~~~~~~~~~~~~~~l~~~g~~~~~~~~~pNt 349 (605)
T PLN02503 271 VNGQRQG-RIMEKPFRMGDCIARELGISNSLPHNRPALDIEAEIKLALDSKRHGFQSNSFAQKMKDLGLERAKLYGWQDT 349 (605)
T ss_pred eecCCCC-eeeeeecCcccccccccccccccccccccCCHHHHHHHHHHhhhcccchHHHHHHhhhcccchhhhCCCCCh
Confidence 9987532 1111110 011367
Q ss_pred hHHhHHHHHHHHHHHHhhCCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHHHhCCCCceeEecccCCCCCCc
Q 019795 156 YGRTKQWCEEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGS 235 (335)
Q Consensus 156 Y~~sK~~~E~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 235 (335)
|..||.++|++++++.. +++++++||+.|.+....+..|+.++. ....|.+.....|... .+.| +++
T Consensus 350 Yt~TK~lAE~lV~~~~~---~LPv~IvRPsiV~st~~eP~pGw~d~~--~~~~p~~~~~g~G~lr--~~~~------~~~ 416 (605)
T PLN02503 350 YVFTKAMGEMVINSMRG---DIPVVIIRPSVIESTWKDPFPGWMEGN--RMMDPIVLYYGKGQLT--GFLA------DPN 416 (605)
T ss_pred HHHHHHHHHHHHHHhcC---CCCEEEEcCCEecccccCCccccccCc--cccchhhhheecccee--EEEe------CCC
Confidence 99999999999986543 899999999999777666666665542 1233444333344332 3566 789
Q ss_pred eeeeeeeHhhhhc---------------cCceEEecCC--ccccHHHHHHHHHHHhCC
Q 019795 236 AVRDYIHVMDLAD---------------GCIAYNLGNG--KGISVLEMVAAFEKASGK 276 (335)
Q Consensus 236 ~~~~~v~~~D~~~---------------~~~~~nv~~~--~~~s~~el~~~i~~~~g~ 276 (335)
...|+|++|.+++ .+.+||++++ ++++|.++++.+.+.+..
T Consensus 417 ~~~DiVPVD~vvna~i~a~a~~~~~~~~~~~vYn~ts~~~nP~t~~~~~~~~~~~~~~ 474 (605)
T PLN02503 417 GVLDVVPADMVVNATLAAMAKHGGAAKPEINVYQIASSVVNPLVFQDLARLLYEHYKS 474 (605)
T ss_pred eeEeEEeecHHHHHHHHHHHhhhcccCCCCCEEEeCCCCCCCeEHHHHHHHHHHHHhh
Confidence 9999999999987 2579999988 899999999999987653
|
|
| >TIGR01746 Thioester-redct thioester reductase domain | Back alignment and domain information |
|---|
Probab=99.96 E-value=8e-27 Score=214.09 Aligned_cols=248 Identities=20% Similarity=0.289 Sum_probs=176.3
Q ss_pred eEEEEcCCChhhHHHHHHHHhCC--CeEEEEecCCCCchhhHHhhhhhc----C--Cccc-cceeEEEccCCCH------
Q 019795 6 NILVTGGAGFIGTHCALQLLQGG--FKVVLIDNLHNSVPEAVDRVKDLA----G--PELA-KKLEFHVGDLRNK------ 70 (335)
Q Consensus 6 ~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~----~--~~~~-~~i~~~~~Dl~d~------ 70 (335)
+|||||||||||++|+++|+++| ++|+++.|+..... ..+++.+.. . .... .++.++.+|++++
T Consensus 1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~ 79 (367)
T TIGR01746 1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEH-AMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSD 79 (367)
T ss_pred CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHH-HHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCH
Confidence 58999999999999999999998 77999998754321 122221110 0 0001 4789999998753
Q ss_pred HHHHHHHhcCCCCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccCCCCCCCccCCCCC
Q 019795 71 DDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQPEKIPCVEDFPY 150 (335)
Q Consensus 71 ~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~ 150 (335)
+.+..+.+ ++|+|||+|+.... ........++|+.++.+++++|.+.+++++|++||.++|+.....+..|+.+.
T Consensus 80 ~~~~~~~~--~~d~vih~a~~~~~---~~~~~~~~~~nv~g~~~ll~~a~~~~~~~~v~iSS~~v~~~~~~~~~~~~~~~ 154 (367)
T TIGR01746 80 AEWERLAE--NVDTIVHNGALVNW---VYPYSELRAANVLGTREVLRLAASGRAKPLHYVSTISVLAAIDLSTVTEDDAI 154 (367)
T ss_pred HHHHHHHh--hCCEEEeCCcEecc---CCcHHHHhhhhhHHHHHHHHHHhhCCCceEEEEccccccCCcCCCCccccccc
Confidence 45666666 79999999997532 23345678899999999999999988888999999999976433333444322
Q ss_pred -----CCCChhHHhHHHHHHHHHHHHhhCCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHH-HHHHHHhCCCCceeE
Q 019795 151 -----GAMNPYGRTKQWCEEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMP-YIQQVAVGRHPELNV 224 (335)
Q Consensus 151 -----~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 224 (335)
.+.+.|+.+|..+|.+++.+... +++++++||+.+||+...+.+. ...++. .+......+. ++
T Consensus 155 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~--g~~~~i~Rpg~v~G~~~~g~~~------~~~~~~~~~~~~~~~~~--~p- 223 (367)
T TIGR01746 155 VTPPPGLAGGYAQSKWVAELLVREASDR--GLPVTIVRPGRILGNSYTGAIN------SSDILWRMVKGCLALGA--YP- 223 (367)
T ss_pred cccccccCCChHHHHHHHHHHHHHHHhc--CCCEEEECCCceeecCCCCCCC------chhHHHHHHHHHHHhCC--CC-
Confidence 23467999999999999876654 8999999999999974332211 112222 2222222111 11
Q ss_pred ecccCCCCCCc-eeeeeeeHhhhhc----------c---CceEEecCCccccHHHHHHHHHHHhCCCCC
Q 019795 225 YGQDYPTKDGS-AVRDYIHVMDLAD----------G---CIAYNLGNGKGISVLEMVAAFEKASGKKIP 279 (335)
Q Consensus 225 ~g~~~~~~~~~-~~~~~v~~~D~~~----------~---~~~~nv~~~~~~s~~el~~~i~~~~g~~~~ 279 (335)
+.. ...+|+|++|+++ . +++||+++++.+|+.|+++.+.+ +|.+.+
T Consensus 224 --------~~~~~~~~~~~vddva~ai~~~~~~~~~~~~~~~~~v~~~~~~s~~e~~~~i~~-~g~~~~ 283 (367)
T TIGR01746 224 --------DSPELTEDLTPVDYVARAIVALSSQPAASAGGPVFHVVNPEPVSLDEFLEWLER-AGYNLK 283 (367)
T ss_pred --------CCCccccCcccHHHHHHHHHHHHhCCCcccCCceEEecCCCCCCHHHHHHHHHH-cCCCCC
Confidence 222 3578999999987 2 67999999999999999999999 776654
|
It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold. |
| >PRK12320 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.5e-25 Score=215.42 Aligned_cols=234 Identities=21% Similarity=0.270 Sum_probs=167.3
Q ss_pred CeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCCCE
Q 019795 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKFEA 84 (335)
Q Consensus 5 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~d~ 84 (335)
|+||||||+||||++|++.|+++|++|++++|...... ...++++.+|++|.. +.+++. ++|+
T Consensus 1 MkILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~~~--------------~~~ve~v~~Dl~d~~-l~~al~--~~D~ 63 (699)
T PRK12320 1 MQILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPHDAL--------------DPRVDYVCASLRNPV-LQELAG--EADA 63 (699)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEeCChhhcc--------------cCCceEEEccCCCHH-HHHHhc--CCCE
Confidence 47999999999999999999999999999998543210 146789999999985 777777 7999
Q ss_pred EEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccCCCCCCCccCCCCCCCCChhHHhHHHHH
Q 019795 85 VIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQWCE 164 (335)
Q Consensus 85 vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~Y~~sK~~~E 164 (335)
|||+|+.... ....+|+.++.+++++|++.++ ++||+||. ||.+. .|. .+|
T Consensus 64 VIHLAa~~~~--------~~~~vNv~Gt~nLleAA~~~Gv-RiV~~SS~--~G~~~--------------~~~----~aE 114 (699)
T PRK12320 64 VIHLAPVDTS--------APGGVGITGLAHVANAAARAGA-RLLFVSQA--AGRPE--------------LYR----QAE 114 (699)
T ss_pred EEEcCccCcc--------chhhHHHHHHHHHHHHHHHcCC-eEEEEECC--CCCCc--------------ccc----HHH
Confidence 9999986321 1125799999999999999987 79999985 33210 122 467
Q ss_pred HHHHHHHhhCCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHHHhCCCCceeEecccCCCCCCceeeeeeeHh
Q 019795 165 EIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAVRDYIHVM 244 (335)
Q Consensus 165 ~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~v~~~ 244 (335)
.++.. + +++++++|++++||+..... ...++..+....... +...++|++
T Consensus 115 ~ll~~----~-~~p~~ILR~~nVYGp~~~~~--------~~r~I~~~l~~~~~~-----------------~pI~vIyVd 164 (699)
T PRK12320 115 TLVST----G-WAPSLVIRIAPPVGRQLDWM--------VCRTVATLLRSKVSA-----------------RPIRVLHLD 164 (699)
T ss_pred HHHHh----c-CCCEEEEeCceecCCCCccc--------HhHHHHHHHHHHHcC-----------------CceEEEEHH
Confidence 76543 2 68999999999999842210 112333333222111 123469999
Q ss_pred hhhc---------cCceEEecCCccccHHHHHHHHHHHhCCCCCceeCCCCCCccceeeccHHHHHHhcCCccccCHHH-
Q 019795 245 DLAD---------GCIAYNLGNGKGISVLEMVAAFEKASGKKIPIKFCPRRVGDATAVYAATDKAHKELGWKPKYGIED- 314 (335)
Q Consensus 245 D~~~---------~~~~~nv~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~d~~k~~~~Lg~~p~~~~~~- 314 (335)
|+++ ..++|||++++.+|+.|+++.+..... .. .+....++.....|...++..++|+|+.+|++
T Consensus 165 Dvv~alv~al~~~~~GiyNIG~~~~~Si~el~~~i~~~~p-~~----~~~~~~~~~~~~pdi~~a~~~~~w~~~~~~~~~ 239 (699)
T PRK12320 165 DLVRFLVLALNTDRNGVVDLATPDTTNVVTAWRLLRSVDP-HL----RTRRVRSWEQLIPEVDIAAVQEDWNFEFGWQAT 239 (699)
T ss_pred HHHHHHHHHHhCCCCCEEEEeCCCeeEHHHHHHHHHHhCC-Cc----cccccccHHHhCCCCchhhhhcCCCCcchHHHH
Confidence 9998 345999999999999999998877622 11 11133445566778888888999999988764
Q ss_pred -HHHHH
Q 019795 315 -MCAHQ 319 (335)
Q Consensus 315 -~~~~~ 319 (335)
.+.++
T Consensus 240 ~~~~~~ 245 (699)
T PRK12320 240 EAIVDT 245 (699)
T ss_pred HHHHhh
Confidence 34444
|
|
| >PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.5e-26 Score=199.67 Aligned_cols=220 Identities=25% Similarity=0.292 Sum_probs=130.4
Q ss_pred EEcCCChhhHHHHHHHHhCCC--eEEEEecCCCCchhhHHhhhhhcC-C--------ccccceeEEEccCCCH------H
Q 019795 9 VTGGAGFIGTHCALQLLQGGF--KVVLIDNLHNSVPEAVDRVKDLAG-P--------ELAKKLEFHVGDLRNK------D 71 (335)
Q Consensus 9 ItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~-~--------~~~~~i~~~~~Dl~d~------~ 71 (335)
|||||||+|++|+++|++++. +|+++.|.... ....+++.+... . ....++.++.+|++++ +
T Consensus 1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~-~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~ 79 (249)
T PF07993_consen 1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSS-QSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDE 79 (249)
T ss_dssp EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSH-HHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HH
T ss_pred CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCccc-ccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChH
Confidence 799999999999999999876 89999996543 233444422211 0 0147999999999874 5
Q ss_pred HHHHHHhcCCCCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccCCCCCCC------cc
Q 019795 72 DLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQPEKIP------CV 145 (335)
Q Consensus 72 ~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~------~~ 145 (335)
++..+.+ .+|+|||+|+...... .....+++||.|+.++++.|...+.++|+|+||+.+.+...... ..
T Consensus 80 ~~~~L~~--~v~~IiH~Aa~v~~~~---~~~~~~~~NV~gt~~ll~la~~~~~~~~~~iSTa~v~~~~~~~~~~~~~~~~ 154 (249)
T PF07993_consen 80 DYQELAE--EVDVIIHCAASVNFNA---PYSELRAVNVDGTRNLLRLAAQGKRKRFHYISTAYVAGSRPGTIEEKVYPEE 154 (249)
T ss_dssp HHHHHHH--H--EEEE--SS-SBS----S--EEHHHHHHHHHHHHHHHTSSS---EEEEEEGGGTTS-TTT--SSS-HHH
T ss_pred Hhhcccc--ccceeeecchhhhhcc---cchhhhhhHHHHHHHHHHHHHhccCcceEEeccccccCCCCCcccccccccc
Confidence 7778877 7899999999864432 44468899999999999999977667999999966655443211 11
Q ss_pred CC---CCCCCCChhHHhHHHHHHHHHHHHhhCCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHHH-hCCCCc
Q 019795 146 ED---FPYGAMNPYGRTKQWCEEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVA-VGRHPE 221 (335)
Q Consensus 146 e~---~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~ 221 (335)
++ ......+.|..||..+|++++.+.++. +++++++||+.|+|....+.+.. ...+...+.... .+..|
T Consensus 155 ~~~~~~~~~~~~gY~~SK~~aE~~l~~a~~~~-g~p~~I~Rp~~i~g~~~~G~~~~-----~~~~~~~~~~~~~~~~~p- 227 (249)
T PF07993_consen 155 EDDLDPPQGFPNGYEQSKWVAERLLREAAQRH-GLPVTIYRPGIIVGDSRTGWWNS-----DDFFPYLLRSCIALGAFP- 227 (249)
T ss_dssp --EEE--TTSEE-HHHHHHHHHHHHHHHHHHH----EEEEEE-EEE-SSSSS---T-----TBHHHHHHHHHHHH-EEE-
T ss_pred cccchhhccCCccHHHHHHHHHHHHHHHHhcC-CceEEEEecCcccccCCCceeec-----cchHHHHHHHHHHcCCcc-
Confidence 11 123345689999999999999999876 99999999999999544432211 221223333333 33322
Q ss_pred eeEecccCCCCCCceeeeeeeHhhhhc
Q 019795 222 LNVYGQDYPTKDGSAVRDYIHVMDLAD 248 (335)
Q Consensus 222 ~~~~g~~~~~~~~~~~~~~v~~~D~~~ 248 (335)
.+.+ +.....|++.||.+|+
T Consensus 228 -~~~~------~~~~~~d~vPVD~va~ 247 (249)
T PF07993_consen 228 -DLPG------DPDARLDLVPVDYVAR 247 (249)
T ss_dssp -S-SB---------TT--EEEHHHHHH
T ss_pred -cccC------CCCceEeEECHHHHHh
Confidence 2333 4455699999999875
|
A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A. |
| >PRK06482 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=9.4e-24 Score=186.50 Aligned_cols=234 Identities=16% Similarity=0.128 Sum_probs=164.0
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc----
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS---- 79 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~---- 79 (335)
.|++|||||+||||++++++|+++|++|++++|+.... ..+.+.. +.++.++.+|++|.+++.++++.
T Consensus 2 ~k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~----~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~ 73 (276)
T PRK06482 2 SKTWFITGASSGFGRGMTERLLARGDRVAATVRRPDAL----DDLKARY----GDRLWVLQLDVTDSAAVRAVVDRAFAA 73 (276)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH----HHHHHhc----cCceEEEEccCCCHHHHHHHHHHHHHH
Confidence 57899999999999999999999999999999864322 2222211 14688999999999988887763
Q ss_pred -CCCCEEEEcccccchhh----hhcChHHHHHHhHHHHHHHHHHH----HHcCCCEEEEeccccccCCCCCCCccCCCCC
Q 019795 80 -QKFEAVIHFGALKAVAE----SVQHPFRYFDNNLIGTINLYQAM----AKYNCKKLVFSSSATIYGQPEKIPCVEDFPY 150 (335)
Q Consensus 80 -~~~d~vi~~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~ 150 (335)
.++|+|||+||...... +.+.++..+++|+.++.++++++ ++.+.+++|++||..... +.
T Consensus 74 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~-----------~~ 142 (276)
T PRK06482 74 LGRIDVVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQGGGRIVQVSSEGGQI-----------AY 142 (276)
T ss_pred cCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcCccccc-----------CC
Confidence 46899999999753221 23455678999999999999997 445667999999965321 22
Q ss_pred CCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccc---cCCCCCCCCCCCCCCCCCChHHHHHHHHhCCCCceeEe
Q 019795 151 GAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNP---VGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVY 225 (335)
Q Consensus 151 ~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v---~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (335)
.+.+.|+.+|...|.+++.++.+. .+++++++||+.+ ||+.... ..............+.+...... +.+
T Consensus 143 ~~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~v~pg~~~t~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~--~~~- 217 (276)
T PRK06482 143 PGFSLYHATKWGIEGFVEAVAQEVAPFGIEFTIVEPGPARTNFGAGLDR--GAPLDAYDDTPVGDLRRALADGS--FAI- 217 (276)
T ss_pred CCCchhHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCccccCCcccccc--cCCCccccchhhHHHHHHHhhcc--CCC-
Confidence 345789999999999999887662 2899999999987 5543210 00000001111222333332221 111
Q ss_pred cccCCCCCCceeeeeeeHhhhhc----------cCceEEecCCccccHHHHHHHHHHHhC
Q 019795 226 GQDYPTKDGSAVRDYIHVMDLAD----------GCIAYNLGNGKGISVLEMVAAFEKASG 275 (335)
Q Consensus 226 g~~~~~~~~~~~~~~v~~~D~~~----------~~~~~nv~~~~~~s~~el~~~i~~~~g 275 (335)
+.+++|+++ .+..||+++++..++.|++..+.+.++
T Consensus 218 --------------~~d~~~~~~a~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 263 (276)
T PRK06482 218 --------------PGDPQKMVQAMIASADQTPAPRRLTLGSDAYASIRAALSERLAALE 263 (276)
T ss_pred --------------CCCHHHHHHHHHHHHcCCCCCeEEecChHHHHHHHHHHHHHHHHHH
Confidence 245677765 356799999999999999988888775
|
|
| >TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.6e-24 Score=190.96 Aligned_cols=243 Identities=16% Similarity=0.136 Sum_probs=168.9
Q ss_pred eEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc----CC
Q 019795 6 NILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS----QK 81 (335)
Q Consensus 6 ~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~----~~ 81 (335)
+|+||||||++|++++++|+++|++|++++|++.+... .+++.+.+|+.|++.+.++++. .+
T Consensus 1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~~--------------~~~~~~~~d~~d~~~l~~a~~~~~~~~g 66 (285)
T TIGR03649 1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSAG--------------PNEKHVKFDWLDEDTWDNPFSSDDGMEP 66 (285)
T ss_pred CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCccccC--------------CCCccccccCCCHHHHHHHHhcccCcCC
Confidence 48999999999999999999999999999998664310 3567788999999999999842 25
Q ss_pred -CCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccCCCCCCCccCCCCCCCCChhHHhH
Q 019795 82 -FEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTK 160 (335)
Q Consensus 82 -~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~Y~~sK 160 (335)
+|.|+|+++... . ......+++++|++.|+++||++||..++.. . ..+
T Consensus 67 ~~d~v~~~~~~~~-----~--------~~~~~~~~i~aa~~~gv~~~V~~Ss~~~~~~------------~------~~~ 115 (285)
T TIGR03649 67 EISAVYLVAPPIP-----D--------LAPPMIKFIDFARSKGVRRFVLLSASIIEKG------------G------PAM 115 (285)
T ss_pred ceeEEEEeCCCCC-----C--------hhHHHHHHHHHHHHcCCCEEEEeeccccCCC------------C------chH
Confidence 899999876421 0 1223457899999999999999998654310 0 012
Q ss_pred HHHHHHHHHHHhhCCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHHHhCCCCceeEecccCCCCCCceeeee
Q 019795 161 QWCEEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAVRDY 240 (335)
Q Consensus 161 ~~~E~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 240 (335)
...|++++.. . +++++++||+.+|+.... +........... + ..+ .++..++|
T Consensus 116 ~~~~~~l~~~---~-gi~~tilRp~~f~~~~~~---------------~~~~~~~~~~~~-~-~~~------~g~~~~~~ 168 (285)
T TIGR03649 116 GQVHAHLDSL---G-GVEYTVLRPTWFMENFSE---------------EFHVEAIRKENK-I-YSA------TGDGKIPF 168 (285)
T ss_pred HHHHHHHHhc---c-CCCEEEEeccHHhhhhcc---------------cccccccccCCe-E-Eec------CCCCccCc
Confidence 2344444321 2 899999999988864210 000011111112 2 233 46677899
Q ss_pred eeHhhhhc-----------cCceEEecCCccccHHHHHHHHHHHhCCCCCceeCCCCCC-----------cc--------
Q 019795 241 IHVMDLAD-----------GCIAYNLGNGKGISVLEMVAAFEKASGKKIPIKFCPRRVG-----------DA-------- 290 (335)
Q Consensus 241 v~~~D~~~-----------~~~~~nv~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~-----------~~-------- 290 (335)
+|++|+++ .++.|++++++.+|+.|+++.+.+.+|++++....+.... ..
T Consensus 169 v~~~Dva~~~~~~l~~~~~~~~~~~l~g~~~~s~~eia~~l~~~~g~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~ 248 (285)
T TIGR03649 169 VSADDIARVAYRALTDKVAPNTDYVVLGPELLTYDDVAEILSRVLGRKITHVKLTEEELAQRLQSFGMPEDLARMLASLD 248 (285)
T ss_pred ccHHHHHHHHHHHhcCCCcCCCeEEeeCCccCCHHHHHHHHHHHhCCceEEEeCCHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 99999987 3578999999999999999999999999876655442110 00
Q ss_pred -----ceeeccHHHHHHhcCCccccCHHHHHHHHHH
Q 019795 291 -----TAVYAATDKAHKELGWKPKYGIEDMCAHQWN 321 (335)
Q Consensus 291 -----~~~~~d~~k~~~~Lg~~p~~~~~~~~~~~~~ 321 (335)
...-..+..+++.+|.+|+ +|++.+++..+
T Consensus 249 ~~~~~g~~~~~~~~~~~~~G~~p~-~~~~~~~~~~~ 283 (285)
T TIGR03649 249 TAVKNGAEVRLNDVVKAVTGSKPR-GFRDFAESNKA 283 (285)
T ss_pred HHHhCCccccccchHHHHhCcCCc-cHHHHHHHhhh
Confidence 0001125556778999998 89888887643
|
This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi. |
| >COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.2e-23 Score=184.25 Aligned_cols=181 Identities=24% Similarity=0.286 Sum_probs=143.4
Q ss_pred CeEEEEcCCChhhHHHHHHHHhC-CCeEEEEecCCCCchhhHHhhhhhcC------CccccceeEEEccCC------CHH
Q 019795 5 KNILVTGGAGFIGTHCALQLLQG-GFKVVLIDNLHNSVPEAVDRVKDLAG------PELAKKLEFHVGDLR------NKD 71 (335)
Q Consensus 5 ~~vlItGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~------~~~~~~i~~~~~Dl~------d~~ 71 (335)
++||+||||||+|++|+..|+.+ ..+|+|+.|-.+ .+.+..++.+... .....+++.+.+|+. ++.
T Consensus 1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s-~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~ 79 (382)
T COG3320 1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQS-DEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSER 79 (382)
T ss_pred CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCC-HHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHH
Confidence 58999999999999999999987 468999998543 4555566655443 124578999999998 466
Q ss_pred HHHHHHhcCCCCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccCCCCCCC----ccCC
Q 019795 72 DLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQPEKIP----CVED 147 (335)
Q Consensus 72 ~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~----~~e~ 147 (335)
.+.++.+ .+|.|||+|+... ......+++..||.||..+++.|...+.|.+.|+||.+++....... .+|+
T Consensus 80 ~~~~La~--~vD~I~H~gA~Vn---~v~pYs~L~~~NVlGT~evlrLa~~gk~Kp~~yVSsisv~~~~~~~~~~~~~~~~ 154 (382)
T COG3320 80 TWQELAE--NVDLIIHNAALVN---HVFPYSELRGANVLGTAEVLRLAATGKPKPLHYVSSISVGETEYYSNFTVDFDEI 154 (382)
T ss_pred HHHHHhh--hcceEEecchhhc---ccCcHHHhcCcchHhHHHHHHHHhcCCCceeEEEeeeeeccccccCCCccccccc
Confidence 8889988 8999999999753 34556688999999999999999998888999999999875442211 2222
Q ss_pred CC-----CCCCChhHHhHHHHHHHHHHHHhhCCCCeEEEEecccccCCCCC
Q 019795 148 FP-----YGAMNPYGRTKQWCEEIAFDVQKADPEWRIILLRYFNPVGAHES 193 (335)
Q Consensus 148 ~~-----~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~lR~~~v~G~~~~ 193 (335)
++ ..+.+.|+.||..+|.+++++... |++++++||+.|-|...+
T Consensus 155 ~~~~~~~~~~~~GY~~SKwvaE~Lvr~A~~r--GLpv~I~Rpg~I~gds~t 203 (382)
T COG3320 155 SPTRNVGQGLAGGYGRSKWVAEKLVREAGDR--GLPVTIFRPGYITGDSRT 203 (382)
T ss_pred cccccccCccCCCcchhHHHHHHHHHHHhhc--CCCeEEEecCeeeccCcc
Confidence 22 234578999999999999988876 999999999999998654
|
|
| >PRK13394 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.1e-23 Score=181.69 Aligned_cols=173 Identities=16% Similarity=0.097 Sum_probs=133.4
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc---
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS--- 79 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~--- 79 (335)
++|++|||||+|+||+++++.|++.|++|++++|++.......+.+.+. +..+.++.+|++|.+++.++++.
T Consensus 6 ~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~Dl~~~~~~~~~~~~~~~ 80 (262)
T PRK13394 6 NGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKA-----GGKAIGVAMDVTNEDAVNAGIDKVAE 80 (262)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhc-----CceEEEEECCCCCHHHHHHHHHHHHH
Confidence 3689999999999999999999999999999999876555555544332 14678899999999998887764
Q ss_pred --CCCCEEEEcccccch----hhhhcChHHHHHHhHHHHHH----HHHHH-HHcCCCEEEEeccccccCCCCCCCccCCC
Q 019795 80 --QKFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTIN----LYQAM-AKYNCKKLVFSSSATIYGQPEKIPCVEDF 148 (335)
Q Consensus 80 --~~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~----l~~~~-~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~ 148 (335)
..+|+|||+|+.... ..+.+.++..+++|+.++.. +++.+ ++.+.+++|++||...+.
T Consensus 81 ~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~~~iv~~ss~~~~~----------- 149 (262)
T PRK13394 81 RFGSVDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDRGGVVIYMGSVHSHE----------- 149 (262)
T ss_pred HcCCCCEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcCCcEEEEEcchhhcC-----------
Confidence 358999999997432 12344566788999999544 55555 555678999999965431
Q ss_pred CCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCCC
Q 019795 149 PYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGAH 191 (335)
Q Consensus 149 ~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~~ 191 (335)
+..+...|+.+|...+.+++.++.+. .+++++++||+.++++.
T Consensus 150 ~~~~~~~y~~sk~a~~~~~~~la~~~~~~~i~v~~v~pg~v~~~~ 194 (262)
T PRK13394 150 ASPLKSAYVTAKHGLLGLARVLAKEGAKHNVRSHVVCPGFVRTPL 194 (262)
T ss_pred CCCCCcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccchh
Confidence 22344689999999999999887763 37999999999999874
|
|
| >TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.5e-22 Score=213.29 Aligned_cols=300 Identities=19% Similarity=0.228 Sum_probs=200.2
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhCC----CeEEEEecCCCCchhhHHhhhhhc------CCccccceeEEEccCCC----
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQGG----FKVVLIDNLHNSVPEAVDRVKDLA------GPELAKKLEFHVGDLRN---- 69 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~g----~~V~~~~r~~~~~~~~~~~~~~~~------~~~~~~~i~~~~~Dl~d---- 69 (335)
.++|+|||||||+|+++++.|++++ ++|+++.|..... ....++.+.. ......++.++.+|+++
T Consensus 971 ~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~-~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lg 1049 (1389)
T TIGR03443 971 PITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEE-AGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFG 1049 (1389)
T ss_pred CceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChH-HHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCC
Confidence 4789999999999999999999887 8899998865432 2223332110 01112468999999974
Q ss_pred --HHHHHHHHhcCCCCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccCCCC-------
Q 019795 70 --KDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQPE------- 140 (335)
Q Consensus 70 --~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~------- 140 (335)
.+.+.++.. ++|+|||+|+.... ..........|+.|+.++++.|++.++++++|+||.++|+...
T Consensus 1050 l~~~~~~~l~~--~~d~iiH~Aa~~~~---~~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~vSS~~v~~~~~~~~~~~~ 1124 (1389)
T TIGR03443 1050 LSDEKWSDLTN--EVDVIIHNGALVHW---VYPYSKLRDANVIGTINVLNLCAEGKAKQFSFVSSTSALDTEYYVNLSDE 1124 (1389)
T ss_pred cCHHHHHHHHh--cCCEEEECCcEecC---ccCHHHHHHhHHHHHHHHHHHHHhCCCceEEEEeCeeecCcccccchhhh
Confidence 456777766 79999999997542 2233345568999999999999998889999999999996421
Q ss_pred -----CCCccCCCC-----CCCCChhHHhHHHHHHHHHHHHhhCCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHH
Q 019795 141 -----KIPCVEDFP-----YGAMNPYGRTKQWCEEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPY 210 (335)
Q Consensus 141 -----~~~~~e~~~-----~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~ 210 (335)
...+.|+.+ ..+.+.|+.||..+|.++..+.. . +++++++||++|||+...+.. . ...+++.
T Consensus 1125 ~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~~~-~-g~~~~i~Rpg~v~G~~~~g~~-----~-~~~~~~~ 1196 (1389)
T TIGR03443 1125 LVQAGGAGIPESDDLMGSSKGLGTGYGQSKWVAEYIIREAGK-R-GLRGCIVRPGYVTGDSKTGAT-----N-TDDFLLR 1196 (1389)
T ss_pred hhhccCCCCCcccccccccccCCCChHHHHHHHHHHHHHHHh-C-CCCEEEECCCccccCCCcCCC-----C-chhHHHH
Confidence 112334332 22346799999999999987655 3 899999999999998544221 1 2223343
Q ss_pred HHHHHhCCCCceeEecccCCCCCCceeeeeeeHhhhhc-------------cCceEEecCCccccHHHHHHHHHHHhCCC
Q 019795 211 IQQVAVGRHPELNVYGQDYPTKDGSAVRDYIHVMDLAD-------------GCIAYNLGNGKGISVLEMVAAFEKASGKK 277 (335)
Q Consensus 211 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~v~~~D~~~-------------~~~~~nv~~~~~~s~~el~~~i~~~~g~~ 277 (335)
+....... ...+ +....++|++++|+++ ...+||++++..+++.++++.+.+. |.+
T Consensus 1197 ~~~~~~~~----~~~p------~~~~~~~~~~Vddva~ai~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~-g~~ 1265 (1389)
T TIGR03443 1197 MLKGCIQL----GLIP------NINNTVNMVPVDHVARVVVAAALNPPKESELAVAHVTGHPRIRFNDFLGTLKTY-GYD 1265 (1389)
T ss_pred HHHHHHHh----CCcC------CCCCccccccHHHHHHHHHHHHhCCcccCCCCEEEeCCCCCCcHHHHHHHHHHh-CCC
Confidence 33221111 1111 3455689999999987 1248999988899999999999764 554
Q ss_pred CCceeCCC----------------------------CCCccceeeccHHHHHHhcC----C---cccc---CHHHHHHHH
Q 019795 278 IPIKFCPR----------------------------RVGDATAVYAATDKAHKELG----W---KPKY---GIEDMCAHQ 319 (335)
Q Consensus 278 ~~~~~~~~----------------------------~~~~~~~~~~d~~k~~~~Lg----~---~p~~---~~~~~~~~~ 319 (335)
.+....+. .........+|+++.++.|. | .... --.+.++.+
T Consensus 1266 ~~~~~~~~w~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 1345 (1389)
T TIGR03443 1266 VEIVDYVHWRKSLERFVIERSEDNALFPLLHFVLDDLPQSTKAPELDDTNAATSLKADAAWTGVDVSSGAGVTEEQIGIY 1345 (1389)
T ss_pred CCccCHHHHHHHHHHhccccCccchhhhHHHHhhccCcccccCCCCCCHHHHHHHHhhcccccCCCcCCCCCCHHHHHHH
Confidence 43221100 00111234567888877763 2 2210 124668889
Q ss_pred HHHHhcCCC
Q 019795 320 WNWAKNNPM 328 (335)
Q Consensus 320 ~~~~~~~~~ 328 (335)
++++++.++
T Consensus 1346 ~~~~~~~~~ 1354 (1389)
T TIGR03443 1346 IAYLVKVGF 1354 (1389)
T ss_pred HHHHHHCCC
Confidence 999987554
|
Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal. |
| >PRK09135 pteridine reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.2e-22 Score=176.48 Aligned_cols=175 Identities=20% Similarity=0.168 Sum_probs=132.0
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCC-chhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc-
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNS-VPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~- 79 (335)
++++++|||||+||||++++++|+++|++|++++|+... .......+.... +..+.++.+|++|.+++.++++.
T Consensus 4 ~~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~----~~~~~~~~~Dl~~~~~~~~~~~~~ 79 (249)
T PRK09135 4 DSAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALR----PGSAAALQADLLDPDALPELVAAC 79 (249)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhc----CCceEEEEcCCCCHHHHHHHHHHH
Confidence 345789999999999999999999999999999986432 222222222211 14578899999999999888874
Q ss_pred ----CCCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHHHHc---CCCEEEEeccccccCCCCCCCccCCC
Q 019795 80 ----QKFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAMAKY---NCKKLVFSSSATIYGQPEKIPCVEDF 148 (335)
Q Consensus 80 ----~~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~~v~~Ss~~vyg~~~~~~~~e~~ 148 (335)
..+|+|||+|+.... ..+.+.++.++++|+.++.++++++... ....++++++.. +..
T Consensus 80 ~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~~~~~~~~-----------~~~ 148 (249)
T PRK09135 80 VAAFGRLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQRGAIVNITDIH-----------AER 148 (249)
T ss_pred HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhCCeEEEEEeChh-----------hcC
Confidence 368999999996321 1233456789999999999999998642 223566665522 123
Q ss_pred CCCCCChhHHhHHHHHHHHHHHHhhC-CCCeEEEEecccccCCC
Q 019795 149 PYGAMNPYGRTKQWCEEIAFDVQKAD-PEWRIILLRYFNPVGAH 191 (335)
Q Consensus 149 ~~~~~~~Y~~sK~~~E~~~~~~~~~~-~~~~~~~lR~~~v~G~~ 191 (335)
+..+...|+.+|..+|.+++.+..++ +++.++++||+.++|+.
T Consensus 149 ~~~~~~~Y~~sK~~~~~~~~~l~~~~~~~i~~~~v~pg~~~~~~ 192 (249)
T PRK09135 149 PLKGYPVYCAAKAALEMLTRSLALELAPEVRVNAVAPGAILWPE 192 (249)
T ss_pred CCCCchhHHHHHHHHHHHHHHHHHHHCCCCeEEEEEeccccCcc
Confidence 55677899999999999999988775 36899999999999985
|
|
| >PRK12429 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.3e-22 Score=177.23 Aligned_cols=175 Identities=17% Similarity=0.068 Sum_probs=135.7
Q ss_pred CCCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc-
Q 019795 1 MASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS- 79 (335)
Q Consensus 1 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~- 79 (335)
|+++|++|||||||+||++++++|+++|++|++++|++.+.......+... ..++.++.+|++|++++.++++.
T Consensus 1 ~~~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~Dl~~~~~~~~~~~~~ 75 (258)
T PRK12429 1 MLKGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKA-----GGKAIGVAMDVTDEEAINAGIDYA 75 (258)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhc-----CCcEEEEEcCCCCHHHHHHHHHHH
Confidence 788899999999999999999999999999999999866554444433321 25688899999999999888774
Q ss_pred ----CCCCEEEEcccccchh----hhhcChHHHHHHhHHHHHHHHHHH----HHcCCCEEEEeccccccCCCCCCCccCC
Q 019795 80 ----QKFEAVIHFGALKAVA----ESVQHPFRYFDNNLIGTINLYQAM----AKYNCKKLVFSSSATIYGQPEKIPCVED 147 (335)
Q Consensus 80 ----~~~d~vi~~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~v~~Ss~~vyg~~~~~~~~e~ 147 (335)
..+|+|||+|+..... .+....+..+++|+.++.++++.+ ++.+.++||++||...+.
T Consensus 76 ~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~---------- 145 (258)
T PRK12429 76 VETFGGVDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQGGGRIINMASVHGLV---------- 145 (258)
T ss_pred HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCeEEEEEcchhhcc----------
Confidence 3689999999864322 233445578889999977666664 445678999999965442
Q ss_pred CCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCCC
Q 019795 148 FPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGAH 191 (335)
Q Consensus 148 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~~ 191 (335)
+..+.+.|+.+|...+.+++.++.+. .++.+.++||+.++++.
T Consensus 146 -~~~~~~~y~~~k~a~~~~~~~l~~~~~~~~i~v~~~~pg~v~~~~ 190 (258)
T PRK12429 146 -GSAGKAAYVSAKHGLIGLTKVVALEGATHGVTVNAICPGYVDTPL 190 (258)
T ss_pred -CCCCcchhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCcchh
Confidence 23345689999999999988876653 37899999999999874
|
|
| >PRK06194 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.2e-23 Score=186.84 Aligned_cols=251 Identities=15% Similarity=0.105 Sum_probs=172.2
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
+++|++|||||+|+||++++++|+++|++|++++|+..........+... ..++.++.+|++|.+++.++++.
T Consensus 4 ~~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~D~~d~~~~~~~~~~~~ 78 (287)
T PRK06194 4 FAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQ-----GAEVLGVRTDVSDAAQVEALADAAL 78 (287)
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhc-----CCeEEEEECCCCCHHHHHHHHHHHH
Confidence 34589999999999999999999999999999998755444433333221 14678899999999999888874
Q ss_pred ---CCCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHH----HHcCC------CEEEEeccccccCCCCCC
Q 019795 80 ---QKFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAM----AKYNC------KKLVFSSSATIYGQPEKI 142 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~----~~~~~------~~~v~~Ss~~vyg~~~~~ 142 (335)
..+|+|||+||.... ..+.+.++..+++|+.++.++++++ .+.+. +++|++||...+..
T Consensus 79 ~~~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~---- 154 (287)
T PRK06194 79 ERFGAVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLLA---- 154 (287)
T ss_pred HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccC----
Confidence 368999999998533 2234566678999999999988874 33332 58999999776532
Q ss_pred CccCCCCCCCCChhHHhHHHHHHHHHHHHhhC----CCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHHHhCC
Q 019795 143 PCVEDFPYGAMNPYGRTKQWCEEIAFDVQKAD----PEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGR 218 (335)
Q Consensus 143 ~~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~----~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 218 (335)
..+...|+.+|...+.+++.++.+. .++++..+.|+.+..+ +.....++
T Consensus 155 -------~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~irv~~v~pg~i~t~--------------------~~~~~~~~ 207 (287)
T PRK06194 155 -------PPAMGIYNVSKHAVVSLTETLYQDLSLVTDQVGASVLCPYFVPTG--------------------IWQSERNR 207 (287)
T ss_pred -------CCCCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEEeCcccCc--------------------cccccccC
Confidence 2344679999999999999887764 1345555555443221 11111122
Q ss_pred CCceeEecccCCCCCCceeeeeeeHhhhhccCceEEecCCccccHHHHHHHHHHHhCCCCCceeC-CCCCCccceeeccH
Q 019795 219 HPELNVYGQDYPTKDGSAVRDYIHVMDLADGCIAYNLGNGKGISVLEMVAAFEKASGKKIPIKFC-PRRVGDATAVYAAT 297 (335)
Q Consensus 219 ~~~~~~~g~~~~~~~~~~~~~~v~~~D~~~~~~~~nv~~~~~~s~~el~~~i~~~~g~~~~~~~~-~~~~~~~~~~~~d~ 297 (335)
+ ..++| ++.+.++|++++|++..- +.. ..++..|+++.+.+.+......... +....+......|.
T Consensus 208 -~-~~~~~------~~~~~~~~~~~~~~~~~~----~~~-~~~s~~dva~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (287)
T PRK06194 208 -P-ADLAN------TAPPTRSQLIAQAMSQKA----VGS-GKVTAEEVAQLVFDAIRAGRFYIYSHPQALASVRTRMEDI 274 (287)
T ss_pred -c-hhccc------CccccchhhHHHHHHHhh----hhc-cCCCHHHHHHHHHHHHHcCCeEEEcCHHHHHHHHHHHHHH
Confidence 2 34455 677889999999998631 111 1389999999999987544333222 22333445556677
Q ss_pred HHHH
Q 019795 298 DKAH 301 (335)
Q Consensus 298 ~k~~ 301 (335)
++++
T Consensus 275 ~~~~ 278 (287)
T PRK06194 275 VQQR 278 (287)
T ss_pred HHhc
Confidence 7663
|
|
| >PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.2e-22 Score=174.62 Aligned_cols=174 Identities=18% Similarity=0.152 Sum_probs=133.6
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHH-hhhhhcCCccccceeEEEccCCCHHHHHHHHhc-
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVD-RVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~- 79 (335)
+++|+||||||||+||++|+++|+++|++|+++.|+......... .+... ..++.++.+|++|++++.++++.
T Consensus 4 ~~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~v~~~~~~~ 78 (249)
T PRK12825 4 LMGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEAL-----GRRAQAVQADVTDKAALEAAVAAA 78 (249)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhc-----CCceEEEECCcCCHHHHHHHHHHH
Confidence 457899999999999999999999999999887776543222221 11111 25688999999999999888764
Q ss_pred ----CCCCEEEEcccccchhh----hhcChHHHHHHhHHHHHHHHHHH----HHcCCCEEEEeccccccCCCCCCCccCC
Q 019795 80 ----QKFEAVIHFGALKAVAE----SVQHPFRYFDNNLIGTINLYQAM----AKYNCKKLVFSSSATIYGQPEKIPCVED 147 (335)
Q Consensus 80 ----~~~d~vi~~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~v~~Ss~~vyg~~~~~~~~e~ 147 (335)
..+|+|||+|+...... ..+.+...+++|+.++.++++.+ ++.+.+++|++||...+.
T Consensus 79 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~i~~SS~~~~~---------- 148 (249)
T PRK12825 79 VERFGRIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQRGGRIVNISSVAGLP---------- 148 (249)
T ss_pred HHHcCCCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECccccCC----------
Confidence 37899999999643222 34456788999999999999987 445678999999977652
Q ss_pred CCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCCC
Q 019795 148 FPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGAH 191 (335)
Q Consensus 148 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~~ 191 (335)
+..+...|+.+|...+.+++.++.+. .+++++++||+.++++.
T Consensus 149 -~~~~~~~y~~sK~~~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~ 193 (249)
T PRK12825 149 -GWPGRSNYAAAKAGLVGLTKALARELAEYGITVNMVAPGDIDTDM 193 (249)
T ss_pred -CCCCchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCccCCc
Confidence 12334679999999999998877652 38999999999999984
|
|
| >KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.3e-22 Score=169.75 Aligned_cols=273 Identities=16% Similarity=0.140 Sum_probs=197.7
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCCC
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKFE 83 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~d 83 (335)
+..+-|.|||||+|++++.+|.+.|..|++=-|..+......+-+.++ .++.+...|+.|+++++++++ ...
T Consensus 61 GiVaTVFGAtGFlGryvvnklak~GSQviiPyR~d~~~~r~lkvmGdL------GQvl~~~fd~~DedSIr~vvk--~sN 132 (391)
T KOG2865|consen 61 GIVATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDEYDPRHLKVMGDL------GQVLFMKFDLRDEDSIRAVVK--HSN 132 (391)
T ss_pred ceEEEEecccccccHHHHHHHhhcCCeEEEeccCCccchhheeecccc------cceeeeccCCCCHHHHHHHHH--hCc
Confidence 456789999999999999999999999999888766544333333332 578899999999999999999 779
Q ss_pred EEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccCCCCCCCccCCCCCCCCChhHHhHHHH
Q 019795 84 AVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQWC 163 (335)
Q Consensus 84 ~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~Y~~sK~~~ 163 (335)
+|||+.|-... ...-...++|+.++..+++.|++.|+.++|++|+... .....+-|-.+|.++
T Consensus 133 VVINLIGrd~e----Tknf~f~Dvn~~~aerlAricke~GVerfIhvS~Lga-------------nv~s~Sr~LrsK~~g 195 (391)
T KOG2865|consen 133 VVINLIGRDYE----TKNFSFEDVNVHIAERLARICKEAGVERFIHVSCLGA-------------NVKSPSRMLRSKAAG 195 (391)
T ss_pred EEEEeeccccc----cCCcccccccchHHHHHHHHHHhhChhheeehhhccc-------------cccChHHHHHhhhhh
Confidence 99999886421 1222467789999999999999999999999999662 233345689999999
Q ss_pred HHHHHHHHhhCCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHHHhCCCCceeEecccCCCCCCceeeeeeeH
Q 019795 164 EEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAVRDYIHV 243 (335)
Q Consensus 164 E~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~v~~ 243 (335)
|..++.+ --..+|+||..+||..+ ++..++...-+.... +++++- ...+....||+
T Consensus 196 E~aVrda-----fPeAtIirPa~iyG~eD-------------rfln~ya~~~rk~~~-~pL~~~-----GekT~K~PVyV 251 (391)
T KOG2865|consen 196 EEAVRDA-----FPEATIIRPADIYGTED-------------RFLNYYASFWRKFGF-LPLIGK-----GEKTVKQPVYV 251 (391)
T ss_pred HHHHHhh-----CCcceeechhhhcccch-------------hHHHHHHHHHHhcCc-eeeecC-----CcceeeccEEE
Confidence 9999874 23589999999999843 233333333332333 677771 34567889999
Q ss_pred hhhhc-----------cCceEEecCCccccHHHHHHHHHHHhCCCCCce-----------------eCCCCCCc------
Q 019795 244 MDLAD-----------GCIAYNLGNGKGISVLEMVAAFEKASGKKIPIK-----------------FCPRRVGD------ 289 (335)
Q Consensus 244 ~D~~~-----------~~~~~nv~~~~~~s~~el~~~i~~~~g~~~~~~-----------------~~~~~~~~------ 289 (335)
-|++. .+++|.++++....+.||++++.+.+..-.... ..|..+..
T Consensus 252 ~DVaa~IvnAvkDp~s~Gktye~vGP~~yql~eLvd~my~~~~~~~ry~r~~mP~f~a~a~~~~f~~~pf~~~~pln~d~ 331 (391)
T KOG2865|consen 252 VDVAAAIVNAVKDPDSMGKTYEFVGPDRYQLSELVDIMYDMAREWPRYVRLPMPIFKAMAAARDFMIVPFPPPSPLNRDQ 331 (391)
T ss_pred ehHHHHHHHhccCccccCceeeecCCchhhHHHHHHHHHHHHhhccccccCCcHHHHHHHhhhheeecCCCCCCCCCHHH
Confidence 99987 588999999999999999999998874321111 11111111
Q ss_pred -----cceeeccHHHHHHhcCCccccCHHHHHHHHHHHHhcC
Q 019795 290 -----ATAVYAATDKAHKELGWKPKYGIEDMCAHQWNWAKNN 326 (335)
Q Consensus 290 -----~~~~~~d~~k~~~~Lg~~p~~~~~~~~~~~~~~~~~~ 326 (335)
.....++...--++||..++ +++-...+.+.-++..
T Consensus 332 ie~~~v~~~vlt~~~tleDLgv~~t-~le~~~~e~l~~yR~~ 372 (391)
T KOG2865|consen 332 IERLTVTDLVLTGAPTLEDLGVVLT-KLELYPVEFLRQYRKG 372 (391)
T ss_pred hhheeehhhhcCCCCcHhhcCceee-ecccccHHHHHHHhhc
Confidence 12334444444578999977 7776655555555554
|
|
| >PRK05875 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.6e-22 Score=176.38 Aligned_cols=236 Identities=18% Similarity=0.183 Sum_probs=166.9
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
|++|++|||||+|+||+++++.|+++|++|++++|+........+.+..... ..++.++.+|++|++++.++++.
T Consensus 5 ~~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~~ 81 (276)
T PRK05875 5 FQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKG---AGAVRYEPADVTDEDQVARAVDAAT 81 (276)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccC---CCceEEEEcCCCCHHHHHHHHHHHH
Confidence 4579999999999999999999999999999999875544333333332110 14678899999999998888774
Q ss_pred ---CCCCEEEEcccccc-----hhhhhcChHHHHHHhHHHHHHHHHHHHH----cCCCEEEEeccccccCCCCCCCccCC
Q 019795 80 ---QKFEAVIHFGALKA-----VAESVQHPFRYFDNNLIGTINLYQAMAK----YNCKKLVFSSSATIYGQPEKIPCVED 147 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~-----~~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~v~~Ss~~vyg~~~~~~~~e~ 147 (335)
.++|+|||+|+... ...+.+++..++++|+.++..+++++.+ .+.+++|++||...+.
T Consensus 82 ~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~~~~~---------- 151 (276)
T PRK05875 82 AWHGRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIAASN---------- 151 (276)
T ss_pred HHcCCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhcC----------
Confidence 37899999998531 1223445678899999999999987654 2345899999977652
Q ss_pred CCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHHHhCCCCceeEe
Q 019795 148 FPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVY 225 (335)
Q Consensus 148 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (335)
+..+.+.|+.+|...|.+++.+..+. .+++++++||+.+.++-.... ... ..+........
T Consensus 152 -~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~Pg~v~t~~~~~~-------~~~---~~~~~~~~~~~------ 214 (276)
T PRK05875 152 -THRWFGAYGVTKSAVDHLMKLAADELGPSWVRVNSIRPGLIRTDLVAPI-------TES---PELSADYRACT------ 214 (276)
T ss_pred -CCCCCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCccCCcccccc-------ccC---HHHHHHHHcCC------
Confidence 22345689999999999999888764 268999999998866521100 000 11111111111
Q ss_pred cccCCCCCCceeeeeeeHhhhhc-------------cCceEEecCCccc----cHHHHHHHHHHHhCCC
Q 019795 226 GQDYPTKDGSAVRDYIHVMDLAD-------------GCIAYNLGNGKGI----SVLEMVAAFEKASGKK 277 (335)
Q Consensus 226 g~~~~~~~~~~~~~~v~~~D~~~-------------~~~~~nv~~~~~~----s~~el~~~i~~~~g~~ 277 (335)
....+.+++|+++ .++++++.++..+ ++.|+++.+.+..+..
T Consensus 215 ----------~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 273 (276)
T PRK05875 215 ----------PLPRVGEVEDVANLAMFLLSDAASWITGQVINVDGGHMLRRGPDFSSMLEPVFGADGLR 273 (276)
T ss_pred ----------CCCCCcCHHHHHHHHHHHcCchhcCcCCCEEEECCCeeccCCccHHHHHHHHhhHHHHh
Confidence 1233567888887 2789999988776 8899999888776543
|
|
| >PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed | Back alignment and domain information |
|---|
Probab=99.90 E-value=6.3e-22 Score=172.18 Aligned_cols=176 Identities=18% Similarity=0.162 Sum_probs=137.6
Q ss_pred CCCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc-
Q 019795 1 MASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS- 79 (335)
Q Consensus 1 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~- 79 (335)
|+++|+|+||||+|++|++++++|+++|++|++++|+..+.......+... ...+.++.+|+.|.+++.++++.
T Consensus 3 ~~~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~-----~~~~~~~~~Dl~~~~~~~~~~~~~ 77 (251)
T PRK12826 3 DLEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAA-----GGKARARQVDVRDRAALKAAVAAG 77 (251)
T ss_pred CCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-----CCeEEEEECCCCCHHHHHHHHHHH
Confidence 567889999999999999999999999999999999765443333333221 14588999999999999988864
Q ss_pred ----CCCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHHH----HcCCCEEEEeccccccCCCCCCCccCC
Q 019795 80 ----QKFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAMA----KYNCKKLVFSSSATIYGQPEKIPCVED 147 (335)
Q Consensus 80 ----~~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~v~~Ss~~vyg~~~~~~~~e~ 147 (335)
..+|+|||+++.... ..+.+++...++.|+.++.++++++. +.+.+++|++||...++
T Consensus 78 ~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~ss~~~~~---------- 147 (251)
T PRK12826 78 VEDFGRLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAGGGRIVLTSSVAGPR---------- 147 (251)
T ss_pred HHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechHhhc----------
Confidence 268999999987543 23345667789999999999999874 34567899999976551
Q ss_pred CCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCCC
Q 019795 148 FPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGAH 191 (335)
Q Consensus 148 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~~ 191 (335)
.+..+...|+.+|..++.+++.+..+. .+++++++||+.++|+.
T Consensus 148 ~~~~~~~~y~~sK~a~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~ 193 (251)
T PRK12826 148 VGYPGLAHYAASKAGLVGFTRALALELAARNITVNSVHPGGVDTPM 193 (251)
T ss_pred cCCCCccHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCCCCcch
Confidence 123345679999999999998876652 28999999999999984
|
|
| >KOG2774 consensus NAD dependent epimerase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.89 E-value=3.5e-22 Score=162.70 Aligned_cols=293 Identities=17% Similarity=0.183 Sum_probs=218.9
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhC-CCe-EEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCC
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQG-GFK-VVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQK 81 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~-g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~ 81 (335)
..+|||||+-|.+|..++..|..+ |.+ |+.-+..+++. ... ...-++..|+.|.+.+++++-..+
T Consensus 44 ~PrvLITG~LGQLG~~~A~LLR~~yGs~~VILSDI~KPp~-~V~------------~~GPyIy~DILD~K~L~eIVVn~R 110 (366)
T KOG2774|consen 44 APRVLITGSLGQLGRGLASLLRYMYGSECVILSDIVKPPA-NVT------------DVGPYIYLDILDQKSLEEIVVNKR 110 (366)
T ss_pred CCeEEEecchHHHhHHHHHHHHHHhCCccEehhhccCCch-hhc------------ccCCchhhhhhccccHHHhhcccc
Confidence 468999999999999999999876 755 44444333321 111 234578899999999999998889
Q ss_pred CCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccCCCC-CCCccCCCCCCCCChhHHhH
Q 019795 82 FEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQPE-KIPCVEDFPYGAMNPYGRTK 160 (335)
Q Consensus 82 ~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~-~~~~~e~~~~~~~~~Y~~sK 160 (335)
+|.+||..+..... .+++.....++|+.|..|+++.+++.+. ++...||.+.+|... .+|-+.-.-..|.+.||.||
T Consensus 111 IdWL~HfSALLSAv-GE~NVpLA~~VNI~GvHNil~vAa~~kL-~iFVPSTIGAFGPtSPRNPTPdltIQRPRTIYGVSK 188 (366)
T KOG2774|consen 111 IDWLVHFSALLSAV-GETNVPLALQVNIRGVHNILQVAAKHKL-KVFVPSTIGAFGPTSPRNPTPDLTIQRPRTIYGVSK 188 (366)
T ss_pred cceeeeHHHHHHHh-cccCCceeeeecchhhhHHHHHHHHcCe-eEeecccccccCCCCCCCCCCCeeeecCceeechhH
Confidence 99999988764322 2344446688999999999999999986 677789999998753 34444445567889999999
Q ss_pred HHHHHHHHHHHhhCCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHHHhCCCCceeEecccCCCCCCceeeee
Q 019795 161 QWCEEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAVRDY 240 (335)
Q Consensus 161 ~~~E~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 240 (335)
.-+|.+-..+..++ ++.+.++|++.++...+. ..+.....+..+..+++.+.-...+ .+++...+
T Consensus 189 VHAEL~GEy~~hrF-g~dfr~~rfPg~is~~~p------gggttdya~A~f~~Al~~gk~tCyl--------rpdtrlpm 253 (366)
T KOG2774|consen 189 VHAELLGEYFNHRF-GVDFRSMRFPGIISATKP------GGGTTDYAIAIFYDALQKGKHTCYL--------RPDTRLPM 253 (366)
T ss_pred HHHHHHHHHHHhhc-CccceecccCcccccCCC------CCCcchhHHHHHHHHHHcCCccccc--------CCCccCce
Confidence 99999988888888 999999999999887543 2233444555667777666543443 46778899
Q ss_pred eeHhhhhc-------------cCceEEecCCccccHHHHHHHHHHHhC-CCCCceeCCCC-CCccceeeccHHHHHHhcC
Q 019795 241 IHVMDLAD-------------GCIAYNLGNGKGISVLEMVAAFEKASG-KKIPIKFCPRR-VGDATAVYAATDKAHKELG 305 (335)
Q Consensus 241 v~~~D~~~-------------~~~~~nv~~~~~~s~~el~~~i~~~~g-~~~~~~~~~~~-~~~~~~~~~d~~k~~~~Lg 305 (335)
+|..|+.+ ..++||+ ++-..|-.|+++.+.+++. .++........ -.+.....+|.+.+++++.
T Consensus 254 my~~dc~~~~~~~~~a~~~~lkrr~ynv-t~~sftpee~~~~~~~~~p~~~i~y~~~srq~iad~wp~~~dds~ar~~wh 332 (366)
T KOG2774|consen 254 MYDTDCMASVIQLLAADSQSLKRRTYNV-TGFSFTPEEIADAIRRVMPGFEIDYDICTRQSIADSWPMSLDDSEARTEWH 332 (366)
T ss_pred eehHHHHHHHHHHHhCCHHHhhhheeee-ceeccCHHHHHHHHHhhCCCceeecccchhhhhhhhcccccCchhHhhHHH
Confidence 99999876 4679999 4888999999999999874 23322222221 2344566789999999999
Q ss_pred CccccCHHHHHHHHHHHHhcCC
Q 019795 306 WKPKYGIEDMCAHQWNWAKNNP 327 (335)
Q Consensus 306 ~~p~~~~~~~~~~~~~~~~~~~ 327 (335)
|+-++.+...+.-+++..+.+-
T Consensus 333 ~~h~~~l~~~i~~~i~~~~~n~ 354 (366)
T KOG2774|consen 333 EKHSLHLLSIISTVVAVHKSNL 354 (366)
T ss_pred HhhhhhHHHHHHHHHHHHHhhh
Confidence 9999999888888888776653
|
|
| >TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase | Back alignment and domain information |
|---|
Probab=99.89 E-value=6.8e-22 Score=172.41 Aligned_cols=171 Identities=18% Similarity=0.112 Sum_probs=129.9
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc----
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS---- 79 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~---- 79 (335)
+|++|||||+|+||++++++|+++|++|++++|+........+.+... +.++.++.+|+.|.+++.++++.
T Consensus 1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~ 75 (255)
T TIGR01963 1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDA-----GGSVIYLVADVTKEDEIADMIAAAAAE 75 (255)
T ss_pred CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-----CCceEEEECCCCCHHHHHHHHHHHHHh
Confidence 578999999999999999999999999999999754433333322211 24688899999999977766653
Q ss_pred -CCCCEEEEcccccchh----hhhcChHHHHHHhHHHHHHHHHHH----HHcCCCEEEEeccccccCCCCCCCccCCCCC
Q 019795 80 -QKFEAVIHFGALKAVA----ESVQHPFRYFDNNLIGTINLYQAM----AKYNCKKLVFSSSATIYGQPEKIPCVEDFPY 150 (335)
Q Consensus 80 -~~~d~vi~~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~ 150 (335)
.++|+|||+|+..... .+.++.+.+++.|+.++..+++++ ++.+.+++|++||...+.. .
T Consensus 76 ~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~~-----------~ 144 (255)
T TIGR01963 76 FGGLDILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQGWGRIINIASAHGLVA-----------S 144 (255)
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhcCC-----------C
Confidence 3689999999874321 123445678889999998888876 4456789999999765422 1
Q ss_pred CCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 151 GAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 151 ~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
.....|+.+|...+.+++.++.+. .+++++++||+.++++
T Consensus 145 ~~~~~y~~sk~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~~~ 186 (255)
T TIGR01963 145 PFKSAYVAAKHGLIGLTKVLALEVAAHGITVNAICPGYVRTP 186 (255)
T ss_pred CCCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccH
Confidence 223679999999999988776542 2799999999999887
|
This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. |
| >PRK08263 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=6.3e-22 Score=174.76 Aligned_cols=169 Identities=14% Similarity=0.115 Sum_probs=131.7
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc---
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS--- 79 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~--- 79 (335)
++|+||||||+|+||++++++|+++|++|++++|+........+. . ...+.++.+|++|++++.++++.
T Consensus 2 ~~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~----~----~~~~~~~~~D~~~~~~~~~~~~~~~~ 73 (275)
T PRK08263 2 MEKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEK----Y----GDRLLPLALDVTDRAAVFAAVETAVE 73 (275)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHh----c----cCCeeEEEccCCCHHHHHHHHHHHHH
Confidence 578999999999999999999999999999999865433222211 1 14678889999999998887764
Q ss_pred --CCCCEEEEcccccchh----hhhcChHHHHHHhHHHHHHHHHHH----HHcCCCEEEEeccccccCCCCCCCccCCCC
Q 019795 80 --QKFEAVIHFGALKAVA----ESVQHPFRYFDNNLIGTINLYQAM----AKYNCKKLVFSSSATIYGQPEKIPCVEDFP 149 (335)
Q Consensus 80 --~~~d~vi~~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~ 149 (335)
..+|+|||+||..... .+.+++++++++|+.++.++++++ ++.+.+++|++||.+.+. +
T Consensus 74 ~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~-----------~ 142 (275)
T PRK08263 74 HFGRLDIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQRSGHIIQISSIGGIS-----------A 142 (275)
T ss_pred HcCCCCEEEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhcC-----------C
Confidence 3789999999975321 234567789999999998888885 445667999999977653 2
Q ss_pred CCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 150 YGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 150 ~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
......|+.+|...+.+++.++.+. .++++.++||+.+..+
T Consensus 143 ~~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~Pg~~~t~ 185 (275)
T PRK08263 143 FPMSGIYHASKWALEGMSEALAQEVAEFGIKVTLVEPGGYSTD 185 (275)
T ss_pred CCCccHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCccCC
Confidence 2334579999999999998887652 2899999999888665
|
|
| >PLN00141 Tic62-NAD(P)-related group II protein; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=6.2e-22 Score=172.39 Aligned_cols=218 Identities=17% Similarity=0.176 Sum_probs=149.3
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCC-HHHHHHHH-hcC
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRN-KDDLDKLF-SSQ 80 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d-~~~~~~~~-~~~ 80 (335)
.+|+|+||||||+||++++++|+++|++|+++.|+..+.... +.. ..++.++.+|++| .+.+.+.+ .
T Consensus 16 ~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~---~~~------~~~~~~~~~Dl~d~~~~l~~~~~~-- 84 (251)
T PLN00141 16 KTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTS---LPQ------DPSLQIVRADVTEGSDKLVEAIGD-- 84 (251)
T ss_pred cCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHh---ccc------CCceEEEEeeCCCCHHHHHHHhhc--
Confidence 468999999999999999999999999999999875432111 100 1468899999998 46666666 4
Q ss_pred CCCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccCCCCCCCccCCC-CCCCCChhHHh
Q 019795 81 KFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQPEKIPCVEDF-PYGAMNPYGRT 159 (335)
Q Consensus 81 ~~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~-~~~~~~~Y~~s 159 (335)
++|+|||+++.... .++...+++|..++.++++++++.+++++|++||.++||.....+..+.. ...+...|..+
T Consensus 85 ~~d~vi~~~g~~~~----~~~~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~~v~g~~~~~~~~~~~~~~~~~~~~~~~ 160 (251)
T PLN00141 85 DSDAVICATGFRRS----FDPFAPWKVDNFGTVNLVEACRKAGVTRFILVSSILVNGAAMGQILNPAYIFLNLFGLTLVA 160 (251)
T ss_pred CCCEEEECCCCCcC----CCCCCceeeehHHHHHHHHHHHHcCCCEEEEEccccccCCCcccccCcchhHHHHHHHHHHH
Confidence 79999999886321 11223457899999999999999888999999999999754322211111 01112234556
Q ss_pred HHHHHHHHHHHHhhCCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHHHhCCCCceeEecccCCCCCCceeee
Q 019795 160 KQWCEEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAVRD 239 (335)
Q Consensus 160 K~~~E~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 239 (335)
|..+|++++. . +++++++||+.+++.... +. +.+.. ......+
T Consensus 161 k~~~e~~l~~----~-gi~~~iirpg~~~~~~~~-----------------------~~---~~~~~------~~~~~~~ 203 (251)
T PLN00141 161 KLQAEKYIRK----S-GINYTIVRPGGLTNDPPT-----------------------GN---IVMEP------EDTLYEG 203 (251)
T ss_pred HHHHHHHHHh----c-CCcEEEEECCCccCCCCC-----------------------ce---EEECC------CCccccC
Confidence 8888877653 3 899999999999875211 00 11100 1112235
Q ss_pred eeeHhhhhc-----------cCceEEecCC---ccccHHHHHHHHHH
Q 019795 240 YIHVMDLAD-----------GCIAYNLGNG---KGISVLEMVAAFEK 272 (335)
Q Consensus 240 ~v~~~D~~~-----------~~~~~nv~~~---~~~s~~el~~~i~~ 272 (335)
+++.+|+++ ...++.+.+. ...++.+++..+++
T Consensus 204 ~i~~~dvA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (251)
T PLN00141 204 SISRDQVAEVAVEALLCPESSYKVVEIVARADAPKRSYKDLFASIKQ 250 (251)
T ss_pred cccHHHHHHHHHHHhcChhhcCcEEEEecCCCCCchhHHHHHHHhhc
Confidence 789999987 3566777652 34789999888765
|
|
| >PRK05876 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.6e-21 Score=172.02 Aligned_cols=173 Identities=18% Similarity=0.198 Sum_probs=132.3
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
+++|+++||||+|+||+++++.|+++|++|++++|+.....+..+.+... ...+.++.+|++|.+++.++++.
T Consensus 4 ~~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~-----~~~~~~~~~Dv~d~~~v~~~~~~~~ 78 (275)
T PRK05876 4 FPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAE-----GFDVHGVMCDVRHREEVTHLADEAF 78 (275)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-----CCeEEEEeCCCCCHHHHHHHHHHHH
Confidence 45789999999999999999999999999999998765544444343321 14578899999999999888774
Q ss_pred ---CCCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHHH----HcC-CCEEEEeccccccCCCCCCCccCC
Q 019795 80 ---QKFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAMA----KYN-CKKLVFSSSATIYGQPEKIPCVED 147 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~-~~~~v~~Ss~~vyg~~~~~~~~e~ 147 (335)
..+|+|||+||.... ..+.+.++..+++|+.++.++++++. +.+ .+++|++||...+.
T Consensus 79 ~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~~---------- 148 (275)
T PRK05876 79 RLLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGLV---------- 148 (275)
T ss_pred HHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhcc----------
Confidence 368999999997422 22345566789999999999999865 333 36899999977652
Q ss_pred CCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 148 FPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 148 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
+..+...|+.+|...+.+.+.+..+. .++.+++++|+.+.++
T Consensus 149 -~~~~~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~ 192 (275)
T PRK05876 149 -PNAGLGAYGVAKYGVVGLAETLAREVTADGIGVSVLCPMVVETN 192 (275)
T ss_pred -CCCCCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCccccc
Confidence 33455789999998766666665543 2899999999988765
|
|
| >PRK07067 sorbitol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=5.7e-22 Score=173.24 Aligned_cols=168 Identities=20% Similarity=0.117 Sum_probs=131.8
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc---
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS--- 79 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~--- 79 (335)
++|++|||||+|+||+++++.|+++|++|++++|+........+.+ ...+.++.+|++|++++.++++.
T Consensus 5 ~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~--------~~~~~~~~~D~~~~~~~~~~~~~~~~ 76 (257)
T PRK07067 5 QGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEI--------GPAAIAVSLDVTRQDSIDRIVAAAVE 76 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHh--------CCceEEEEccCCCHHHHHHHHHHHHH
Confidence 4689999999999999999999999999999998755433332222 14578899999999999888874
Q ss_pred --CCCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHHHHc----C-CCEEEEecccc-ccCCCCCCCccCC
Q 019795 80 --QKFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAMAKY----N-CKKLVFSSSAT-IYGQPEKIPCVED 147 (335)
Q Consensus 80 --~~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~~----~-~~~~v~~Ss~~-vyg~~~~~~~~e~ 147 (335)
..+|++||+|+.... ..+.++++..+++|+.++.++++++... + ..++|++||.. .+
T Consensus 77 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~----------- 145 (257)
T PRK07067 77 RFGGIDILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGRR----------- 145 (257)
T ss_pred HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhCC-----------
Confidence 378999999986432 2234567788999999999999997643 1 24899999954 33
Q ss_pred CCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 148 FPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 148 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
+..+...|+.+|...+.+++.++.+. .++++.+++|+.++++
T Consensus 146 -~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~ 189 (257)
T PRK07067 146 -GEALVSHYCATKAAVISYTQSAALALIRHGINVNAIAPGVVDTP 189 (257)
T ss_pred -CCCCCchhhhhHHHHHHHHHHHHHHhcccCeEEEEEeeCcccch
Confidence 22355689999999999999887752 3899999999999987
|
|
| >PRK07774 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=4.5e-21 Score=166.80 Aligned_cols=170 Identities=18% Similarity=0.124 Sum_probs=133.0
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
+++|+++||||+|+||+++++.|+++|++|++++|+........+.+.+. ...+.++.+|++|.+++.++++.
T Consensus 4 ~~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~Dl~~~~~~~~~~~~~~ 78 (250)
T PRK07774 4 FDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVAD-----GGTAIAVQVDVSDPDSAKAMADATV 78 (250)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-----CCcEEEEEcCCCCHHHHHHHHHHHH
Confidence 35689999999999999999999999999999999755443333333221 13567889999999988887764
Q ss_pred ---CCCCEEEEcccccc-------hhhhhcChHHHHHHhHHHHHHHHHHHHHc----CCCEEEEeccccccCCCCCCCcc
Q 019795 80 ---QKFEAVIHFGALKA-------VAESVQHPFRYFDNNLIGTINLYQAMAKY----NCKKLVFSSSATIYGQPEKIPCV 145 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~-------~~~~~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~~v~~Ss~~vyg~~~~~~~~ 145 (335)
..+|+|||+|+... ...+.+.++.++++|+.++.++++++... +.+++|++||...|.
T Consensus 79 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~-------- 150 (250)
T PRK07774 79 SAFGGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQSSTAAWL-------- 150 (250)
T ss_pred HHhCCCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEecccccC--------
Confidence 36899999999742 12234556678999999999999987653 346999999977652
Q ss_pred CCCCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 146 EDFPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 146 e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
+.+.|+.+|.+.|.+++.+.++. .++.+++++|+.+..+
T Consensus 151 ------~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~ 191 (250)
T PRK07774 151 ------YSNFYGLAKVGLNGLTQQLARELGGMNIRVNAIAPGPIDTE 191 (250)
T ss_pred ------CccccHHHHHHHHHHHHHHHHHhCccCeEEEEEecCcccCc
Confidence 34589999999999999988764 3789999999887665
|
|
| >PRK12829 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.3e-21 Score=170.03 Aligned_cols=173 Identities=17% Similarity=0.162 Sum_probs=130.9
Q ss_pred CCCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc-
Q 019795 1 MASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS- 79 (335)
Q Consensus 1 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~- 79 (335)
++++|++|||||+|+||++++++|+++|++|++++|++.......+.... .++.++.+|++|++++.++++.
T Consensus 8 ~~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-------~~~~~~~~D~~~~~~~~~~~~~~ 80 (264)
T PRK12829 8 PLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPG-------AKVTATVADVADPAQVERVFDTA 80 (264)
T ss_pred ccCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc-------CceEEEEccCCCHHHHHHHHHHH
Confidence 35679999999999999999999999999999999975443322222110 2468899999999998887764
Q ss_pred ----CCCCEEEEccccc-c----hhhhhcChHHHHHHhHHHHHHHHHHHHH----cCC-CEEEEeccccccCCCCCCCcc
Q 019795 80 ----QKFEAVIHFGALK-A----VAESVQHPFRYFDNNLIGTINLYQAMAK----YNC-KKLVFSSSATIYGQPEKIPCV 145 (335)
Q Consensus 80 ----~~~d~vi~~a~~~-~----~~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~-~~~v~~Ss~~vyg~~~~~~~~ 145 (335)
.++|+|||+|+.. . .....+.+...+++|+.++.++++++.. .+. ++++++||.....
T Consensus 81 ~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~vv~~ss~~~~~-------- 152 (264)
T PRK12829 81 VERFGGLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGHGGVIIALSSVAGRL-------- 152 (264)
T ss_pred HHHhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEeccccccc--------
Confidence 3789999999975 1 1223455678899999999999998643 344 5688888754321
Q ss_pred CCCCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCCC
Q 019795 146 EDFPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGAH 191 (335)
Q Consensus 146 e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~~ 191 (335)
+..+...|+.+|...|.+++.++.+. .+++++++||+.++++.
T Consensus 153 ---~~~~~~~y~~~K~a~~~~~~~l~~~~~~~~i~~~~l~pg~v~~~~ 197 (264)
T PRK12829 153 ---GYPGRTPYAASKWAVVGLVKSLAIELGPLGIRVNAILPGIVRGPR 197 (264)
T ss_pred ---CCCCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCcCChH
Confidence 12234579999999999998877653 38999999999999984
|
|
| >PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=3.9e-21 Score=167.79 Aligned_cols=172 Identities=19% Similarity=0.146 Sum_probs=130.9
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCc-hhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSV-PEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
|+|+++||||+|+||+++++.|+++|++|++++|..... ......+.. ...++.++.+|++|++++.++++.
T Consensus 1 ~~k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~~~~ 75 (256)
T PRK12745 1 MRPVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRA-----LGVEVIFFPADVADLSAHEAMLDAAQ 75 (256)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHh-----cCCceEEEEecCCCHHHHHHHHHHHH
Confidence 358999999999999999999999999999999864322 222222221 114688999999999988887764
Q ss_pred ---CCCCEEEEcccccch------hhhhcChHHHHHHhHHHHHHHHHHHHHc-----C-----CCEEEEeccccccCCCC
Q 019795 80 ---QKFEAVIHFGALKAV------AESVQHPFRYFDNNLIGTINLYQAMAKY-----N-----CKKLVFSSSATIYGQPE 140 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~~------~~~~~~~~~~~~~nv~~~~~l~~~~~~~-----~-----~~~~v~~Ss~~vyg~~~ 140 (335)
..+|+|||+|+.... ..+.+.++..+++|+.++.++++++... + .+++|++||...+.
T Consensus 76 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~--- 152 (256)
T PRK12745 76 AAWGRIDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIM--- 152 (256)
T ss_pred HhcCCCCEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhcc---
Confidence 378999999986421 2234566788999999999999986532 1 45799999966542
Q ss_pred CCCccCCCCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 141 KIPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 141 ~~~~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
+..+.+.|+.+|.+.|.+++.++.+. .+++++++||+.+.++
T Consensus 153 --------~~~~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~v~t~ 196 (256)
T PRK12745 153 --------VSPNRGEYCISKAGLSMAAQLFAARLAEEGIGVYEVRPGLIKTD 196 (256)
T ss_pred --------CCCCCcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEecCCCcCc
Confidence 22345689999999999999888652 3899999999998876
|
|
| >PRK06180 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.3e-21 Score=172.92 Aligned_cols=171 Identities=16% Similarity=0.124 Sum_probs=133.0
Q ss_pred CCCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc-
Q 019795 1 MASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS- 79 (335)
Q Consensus 1 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~- 79 (335)
|+++|++|||||+|+||++++++|+++|++|++++|+..... .+.+.. ..++..+.+|++|++++.++++.
T Consensus 1 ~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~----~l~~~~----~~~~~~~~~D~~d~~~~~~~~~~~ 72 (277)
T PRK06180 1 MSSMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARA----DFEALH----PDRALARLLDVTDFDAIDAVVADA 72 (277)
T ss_pred CCCCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHH----HHHhhc----CCCeeEEEccCCCHHHHHHHHHHH
Confidence 777899999999999999999999999999999998654322 222211 14678899999999998887774
Q ss_pred ----CCCCEEEEcccccchh----hhhcChHHHHHHhHHHHHHHHHHHH----HcCCCEEEEeccccccCCCCCCCccCC
Q 019795 80 ----QKFEAVIHFGALKAVA----ESVQHPFRYFDNNLIGTINLYQAMA----KYNCKKLVFSSSATIYGQPEKIPCVED 147 (335)
Q Consensus 80 ----~~~d~vi~~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~v~~Ss~~vyg~~~~~~~~e~ 147 (335)
.++|+|||+||..... .+.+.+...+++|+.++.++++++. +.+.+++|++||...+.
T Consensus 73 ~~~~~~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~iSS~~~~~---------- 142 (277)
T PRK06180 73 EATFGPIDVLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVNITSMGGLI---------- 142 (277)
T ss_pred HHHhCCCCEEEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCCEEEEEecccccC----------
Confidence 3689999999974321 1234456779999999999999854 34557899999976542
Q ss_pred CCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 148 FPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 148 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
+..+...|+.+|...|.+++.++.+. .+++++++||+.+.++
T Consensus 143 -~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~ 186 (277)
T PRK06180 143 -TMPGIGYYCGSKFALEGISESLAKEVAPFGIHVTAVEPGSFRTD 186 (277)
T ss_pred -CCCCcchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCcccC
Confidence 22345689999999999998887652 3899999999999776
|
|
| >PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.9e-21 Score=167.35 Aligned_cols=174 Identities=19% Similarity=0.130 Sum_probs=134.1
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
|++|++|||||+|+||+++++.|+++|++|++++|++.+.......+... ..++.++.+|++|++++.++++.
T Consensus 3 ~~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~ 77 (246)
T PRK05653 3 LQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAA-----GGEARVLVFDVSDEAAVRALIEAAV 77 (246)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhc-----CCceEEEEccCCCHHHHHHHHHHHH
Confidence 45589999999999999999999999999999999866544333333321 24678899999999988887763
Q ss_pred ---CCCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHHH----HcCCCEEEEeccccccCCCCCCCccCCC
Q 019795 80 ---QKFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAMA----KYNCKKLVFSSSATIYGQPEKIPCVEDF 148 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~v~~Ss~~vyg~~~~~~~~e~~ 148 (335)
..+|+|||+|+.... ..+.+.+...++.|+.++.++++++. +.+.+++|++||.....
T Consensus 78 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~~ss~~~~~----------- 146 (246)
T PRK05653 78 EAFGALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKARYGRIVNISSVSGVT----------- 146 (246)
T ss_pred HHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhcc-----------
Confidence 368999999987432 12334456789999999999999874 44667999999965431
Q ss_pred CCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCCC
Q 019795 149 PYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGAH 191 (335)
Q Consensus 149 ~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~~ 191 (335)
+..+...|+.+|...+.+++.++++. .++.++++||+.++++.
T Consensus 147 ~~~~~~~y~~sk~~~~~~~~~l~~~~~~~~i~~~~i~pg~~~~~~ 191 (246)
T PRK05653 147 GNPGQTNYSAAKAGVIGFTKALALELASRGITVNAVAPGFIDTDM 191 (246)
T ss_pred CCCCCcHhHhHHHHHHHHHHHHHHHHhhcCeEEEEEEeCCcCCcc
Confidence 23445679999999999998877653 37899999999998873
|
|
| >PRK07074 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=1e-21 Score=171.70 Aligned_cols=227 Identities=15% Similarity=0.067 Sum_probs=161.6
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc---
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS--- 79 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~--- 79 (335)
++|+++||||||+||+++++.|+++|++|++++|+........+.+. ..++.++.+|++|.+++.++++.
T Consensus 1 ~~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~-------~~~~~~~~~D~~~~~~~~~~~~~~~~ 73 (257)
T PRK07074 1 TKRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALG-------DARFVPVACDLTDAASLAAALANAAA 73 (257)
T ss_pred CCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc-------CCceEEEEecCCCHHHHHHHHHHHHH
Confidence 46899999999999999999999999999999987554433333221 14678899999999999887764
Q ss_pred --CCCCEEEEcccccchh----hhhcChHHHHHHhHHHHHHHHHHHH----HcCCCEEEEeccccccCCCCCCCccCCCC
Q 019795 80 --QKFEAVIHFGALKAVA----ESVQHPFRYFDNNLIGTINLYQAMA----KYNCKKLVFSSSATIYGQPEKIPCVEDFP 149 (335)
Q Consensus 80 --~~~d~vi~~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~ 149 (335)
.++|+|||+++..... .+.+.+...+.+|+.++.++++++. +.+.+++|++||...+..
T Consensus 74 ~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~----------- 142 (257)
T PRK07074 74 ERGPVDVLVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRSRGAVVNIGSVNGMAA----------- 142 (257)
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhcCC-----------
Confidence 3689999999874321 1223445667899999999999874 344568999999543311
Q ss_pred CCCCChhHHhHHHHHHHHHHHHhhCC--CCeEEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHHHhCCCCceeEecc
Q 019795 150 YGAMNPYGRTKQWCEEIAFDVQKADP--EWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQ 227 (335)
Q Consensus 150 ~~~~~~Y~~sK~~~E~~~~~~~~~~~--~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 227 (335)
.....|+.+|.+.+.+++.++.+.. ++++.++||+.++++...... .. ..........
T Consensus 143 -~~~~~y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~-------~~-~~~~~~~~~~----------- 202 (257)
T PRK07074 143 -LGHPAYSAAKAGLIHYTKLLAVEYGRFGIRANAVAPGTVKTQAWEARV-------AA-NPQVFEELKK----------- 202 (257)
T ss_pred -CCCcccHHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCCcchhhccc-------cc-ChHHHHHHHh-----------
Confidence 1123699999999999999887642 689999999998876311000 00 0011111110
Q ss_pred cCCCCCCceeeeeeeHhhhhc-------------cCceEEecCCccccHHHHHHHHHHH
Q 019795 228 DYPTKDGSAVRDYIHVMDLAD-------------GCIAYNLGNGKGISVLEMVAAFEKA 273 (335)
Q Consensus 228 ~~~~~~~~~~~~~v~~~D~~~-------------~~~~~nv~~~~~~s~~el~~~i~~~ 273 (335)
....++|++++|+++ .++++++.++...+.+|+++.+.+.
T Consensus 203 ------~~~~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~ 255 (257)
T PRK07074 203 ------WYPLQDFATPDDVANAVLFLASPAARAITGVCLPVDGGLTAGNREMARTLTLE 255 (257)
T ss_pred ------cCCCCCCCCHHHHHHHHHHHcCchhcCcCCcEEEeCCCcCcCChhhhhhhccc
Confidence 112357899999987 3678889888889999999887653
|
|
| >PRK05717 oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=99.88 E-value=3.5e-21 Score=168.07 Aligned_cols=172 Identities=20% Similarity=0.159 Sum_probs=131.9
Q ss_pred CCCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc-
Q 019795 1 MASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS- 79 (335)
Q Consensus 1 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~- 79 (335)
++++|+++||||+|+||+++++.|+++|++|++++|++.........+ ...+.++.+|++|.+++.+++++
T Consensus 7 ~~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~--------~~~~~~~~~Dl~~~~~~~~~~~~~ 78 (255)
T PRK05717 7 GHNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKAL--------GENAWFIAMDVADEAQVAAGVAEV 78 (255)
T ss_pred ccCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHc--------CCceEEEEccCCCHHHHHHHHHHH
Confidence 356799999999999999999999999999999988654332221111 14578899999999988776654
Q ss_pred ----CCCCEEEEcccccchh------hhhcChHHHHHHhHHHHHHHHHHHHHc---CCCEEEEeccccccCCCCCCCccC
Q 019795 80 ----QKFEAVIHFGALKAVA------ESVQHPFRYFDNNLIGTINLYQAMAKY---NCKKLVFSSSATIYGQPEKIPCVE 146 (335)
Q Consensus 80 ----~~~d~vi~~a~~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~~v~~Ss~~vyg~~~~~~~~e 146 (335)
..+|+|||+|+..... .+.++++..+++|+.++.++++++... ..+++|++||...+.
T Consensus 79 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~ii~~sS~~~~~--------- 149 (255)
T PRK05717 79 LGQFGRLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAHNGAIVNLASTRARQ--------- 149 (255)
T ss_pred HHHhCCCCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCcEEEEEcchhhcC---------
Confidence 3689999999974321 134556789999999999999998642 236899999866542
Q ss_pred CCCCCCCChhHHhHHHHHHHHHHHHhhC-CCCeEEEEecccccCCC
Q 019795 147 DFPYGAMNPYGRTKQWCEEIAFDVQKAD-PEWRIILLRYFNPVGAH 191 (335)
Q Consensus 147 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-~~~~~~~lR~~~v~G~~ 191 (335)
+......|+.+|...+.+++.++.+. +++++.+++|+.+.++.
T Consensus 150 --~~~~~~~Y~~sKaa~~~~~~~la~~~~~~i~v~~i~Pg~i~t~~ 193 (255)
T PRK05717 150 --SEPDTEAYAASKGGLLALTHALAISLGPEIRVNAVSPGWIDARD 193 (255)
T ss_pred --CCCCCcchHHHHHHHHHHHHHHHHHhcCCCEEEEEecccCcCCc
Confidence 11234579999999999999988875 35899999999998864
|
|
| >PRK06914 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=3.7e-21 Score=170.27 Aligned_cols=174 Identities=17% Similarity=0.213 Sum_probs=131.3
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
|++|++|||||||+||+++++.|+++|++|++++|+........+.+.... .+..+.++.+|++|++++.+ ++.
T Consensus 1 ~~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~~~D~~d~~~~~~-~~~~~ 76 (280)
T PRK06914 1 MNKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLN---LQQNIKVQQLDVTDQNSIHN-FQLVL 76 (280)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcC---CCCceeEEecCCCCHHHHHH-HHHHH
Confidence 457899999999999999999999999999999987655444333332211 12468899999999988876 443
Q ss_pred ---CCCCEEEEcccccchh----hhhcChHHHHHHhHHHHHHHHHHH----HHcCCCEEEEeccccccCCCCCCCccCCC
Q 019795 80 ---QKFEAVIHFGALKAVA----ESVQHPFRYFDNNLIGTINLYQAM----AKYNCKKLVFSSSATIYGQPEKIPCVEDF 148 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~ 148 (335)
..+|+|||+|+..... .+.+.++..+++|+.++.++++++ ++.+.+++|++||...+.
T Consensus 77 ~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~----------- 145 (280)
T PRK06914 77 KEIGRIDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQKSGKIINISSISGRV----------- 145 (280)
T ss_pred HhcCCeeEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECcccccC-----------
Confidence 3689999999874321 123456678899999999998885 455667999999854321
Q ss_pred CCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 149 PYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 149 ~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
+..+...|+.+|...+.+++.++.+. .+++++++||+.++++
T Consensus 146 ~~~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~ 189 (280)
T PRK06914 146 GFPGLSPYVSSKYALEGFSESLRLELKPFGIDVALIEPGSYNTN 189 (280)
T ss_pred CCCCCchhHHhHHHHHHHHHHHHHHhhhhCCEEEEEecCCcccc
Confidence 22345689999999999988876431 2899999999998876
|
|
| >PRK07890 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=4.7e-21 Score=167.48 Aligned_cols=174 Identities=17% Similarity=0.156 Sum_probs=136.3
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
+++|++|||||+|+||++++++|+++|++|++++|++.......+.+... ...+.++.+|++|++++.++++.
T Consensus 3 l~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~ 77 (258)
T PRK07890 3 LKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDL-----GRRALAVPTDITDEDQCANLVALAL 77 (258)
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHh-----CCceEEEecCCCCHHHHHHHHHHHH
Confidence 45699999999999999999999999999999999765443333333221 14678999999999998887764
Q ss_pred ---CCCCEEEEcccccch-----hhhhcChHHHHHHhHHHHHHHHHHHHHc---CCCEEEEeccccccCCCCCCCccCCC
Q 019795 80 ---QKFEAVIHFGALKAV-----AESVQHPFRYFDNNLIGTINLYQAMAKY---NCKKLVFSSSATIYGQPEKIPCVEDF 148 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~~-----~~~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~~v~~Ss~~vyg~~~~~~~~e~~ 148 (335)
.++|+|||+|+.... ..+.+.++..+++|+.++..+++++... ..+++|++||...+.
T Consensus 78 ~~~g~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ii~~sS~~~~~----------- 146 (258)
T PRK07890 78 ERFGRVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESGGSIVMINSMVLRH----------- 146 (258)
T ss_pred HHcCCccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCEEEEEechhhcc-----------
Confidence 378999999986322 2234667788999999999999998652 235899999976542
Q ss_pred CCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCCC
Q 019795 149 PYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGAH 191 (335)
Q Consensus 149 ~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~~ 191 (335)
+..+...|+.+|...+.+++.++.+. .++++.++||+.++++.
T Consensus 147 ~~~~~~~Y~~sK~a~~~l~~~~a~~~~~~~i~v~~v~pg~v~~~~ 191 (258)
T PRK07890 147 SQPKYGAYKMAKGALLAASQSLATELGPQGIRVNSVAPGYIWGDP 191 (258)
T ss_pred CCCCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEeCCccCcHH
Confidence 33345689999999999999888653 27999999999999984
|
|
| >PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.6e-21 Score=170.56 Aligned_cols=172 Identities=12% Similarity=0.105 Sum_probs=131.0
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc----
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS---- 79 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~---- 79 (335)
+|+||||||+|+||+++++.|+++|++|++++|+........+.+....+ ...+.++.+|++|.+++..++++
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~i~~~~~~~~~~ 78 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYG---EGMAYGFGADATSEQSVLALSRGVDEI 78 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcC---CceeEEEEccCCCHHHHHHHHHHHHHH
Confidence 68999999999999999999999999999999976554444443332211 13588999999999988877764
Q ss_pred -CCCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHHHH----cC-CCEEEEecccc-ccCCCCCCCccCCC
Q 019795 80 -QKFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAMAK----YN-CKKLVFSSSAT-IYGQPEKIPCVEDF 148 (335)
Q Consensus 80 -~~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~-~~~~v~~Ss~~-vyg~~~~~~~~e~~ 148 (335)
..+|+|||+|+.... ..+.++++..+++|+.++.++++++.+ .+ ..++|++||.. .++
T Consensus 79 ~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~~~~~----------- 147 (259)
T PRK12384 79 FGRVDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVG----------- 147 (259)
T ss_pred cCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCcccccC-----------
Confidence 478999999986432 223445678899999999988887654 34 35899999854 332
Q ss_pred CCCCCChhHHhHHHHHHHHHHHHhh--CCCCeEEEEecccccCC
Q 019795 149 PYGAMNPYGRTKQWCEEIAFDVQKA--DPEWRIILLRYFNPVGA 190 (335)
Q Consensus 149 ~~~~~~~Y~~sK~~~E~~~~~~~~~--~~~~~~~~lR~~~v~G~ 190 (335)
......|+.+|++.+.+++.++.+ ..++++.++||+.++++
T Consensus 148 -~~~~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~pg~~~~~ 190 (259)
T PRK12384 148 -SKHNSGYSAAKFGGVGLTQSLALDLAEYGITVHSLMLGNLLKS 190 (259)
T ss_pred -CCCCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCcccc
Confidence 123457999999999998887754 13899999999988876
|
|
| >PRK07453 protochlorophyllide oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=99.88 E-value=3.1e-21 Score=174.17 Aligned_cols=183 Identities=15% Similarity=0.135 Sum_probs=136.8
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc---
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS--- 79 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~--- 79 (335)
++|+++||||+|+||+++++.|+++|++|++++|+..........+.. ....+.++.+|++|.+++.++++.
T Consensus 5 ~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~-----~~~~~~~~~~Dl~~~~~v~~~~~~~~~ 79 (322)
T PRK07453 5 AKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGI-----PPDSYTIIHIDLGDLDSVRRFVDDFRA 79 (322)
T ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhc-----cCCceEEEEecCCCHHHHHHHHHHHHH
Confidence 578999999999999999999999999999999875544433333321 124688899999999999888874
Q ss_pred --CCCCEEEEcccccch-----hhhhcChHHHHHHhHHHHHHHHHHHHH----cC--CCEEEEeccccccCCC-C-C--C
Q 019795 80 --QKFEAVIHFGALKAV-----AESVQHPFRYFDNNLIGTINLYQAMAK----YN--CKKLVFSSSATIYGQP-E-K--I 142 (335)
Q Consensus 80 --~~~d~vi~~a~~~~~-----~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~--~~~~v~~Ss~~vyg~~-~-~--~ 142 (335)
.++|+|||+||.... ..+.+.++.++++|+.|+.++++++.. .+ .++||++||...+... . . .
T Consensus 80 ~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~~~~~~~~~~~~~ 159 (322)
T PRK07453 80 LGKPLDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTANPKELGGKIPI 159 (322)
T ss_pred hCCCccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEcccccCccccCCccCC
Confidence 359999999996421 224456778999999999999988654 22 2599999997654311 0 0 0
Q ss_pred Cc--------------------cCCCCCCCCChhHHhHHHHHHHHHHHHhhC---CCCeEEEEecccccCC
Q 019795 143 PC--------------------VEDFPYGAMNPYGRTKQWCEEIAFDVQKAD---PEWRIILLRYFNPVGA 190 (335)
Q Consensus 143 ~~--------------------~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~~lR~~~v~G~ 190 (335)
+. .+..++.|...|+.||.+.+.+++.+++++ .++.+.++|||.|++.
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t 230 (322)
T PRK07453 160 PAPADLGDLSGFEAGFKAPISMADGKKFKPGKAYKDSKLCNMLTMRELHRRYHESTGITFSSLYPGCVADT 230 (322)
T ss_pred CCccchhhhhcchhcccccccccCccCCCccchhhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCC
Confidence 00 011234567789999999999888888775 2799999999999875
|
|
| >PRK07523 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=6.4e-21 Score=166.41 Aligned_cols=173 Identities=16% Similarity=0.097 Sum_probs=134.6
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
+++|++|||||+|+||++++++|+++|++|++++|+..+.....+.+... +.++.++.+|++|++++.++++.
T Consensus 8 ~~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~ 82 (255)
T PRK07523 8 LTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQ-----GLSAHALAFDVTDHDAVRAAIDAFE 82 (255)
T ss_pred CCCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc-----CceEEEEEccCCCHHHHHHHHHHHH
Confidence 35689999999999999999999999999999998765444333333221 14578899999999999988874
Q ss_pred ---CCCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHHHHc----CCCEEEEeccccccCCCCCCCccCCC
Q 019795 80 ---QKFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAMAKY----NCKKLVFSSSATIYGQPEKIPCVEDF 148 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~~v~~Ss~~vyg~~~~~~~~e~~ 148 (335)
..+|+|||+|+.... ....+.++.++++|+.++.++++++.+. +.+++|++||.....
T Consensus 83 ~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~----------- 151 (255)
T PRK07523 83 AEIGPIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAGKIINIASVQSAL----------- 151 (255)
T ss_pred HhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEccchhcc-----------
Confidence 368999999997432 1234455678899999999999987643 457999999965431
Q ss_pred CCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 149 PYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 149 ~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
+..+...|+.+|...+.+++.++.++ .++++.++||+.+.++
T Consensus 152 ~~~~~~~y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~ 195 (255)
T PRK07523 152 ARPGIAPYTATKGAVGNLTKGMATDWAKHGLQCNAIAPGYFDTP 195 (255)
T ss_pred CCCCCccHHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcccCc
Confidence 23345689999999999999887652 2899999999998887
|
|
| >PRK08063 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=6.6e-21 Score=165.77 Aligned_cols=174 Identities=16% Similarity=0.117 Sum_probs=132.4
Q ss_pred CCCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEE-ecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc
Q 019795 1 MASEKNILVTGGAGFIGTHCALQLLQGGFKVVLI-DNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS 79 (335)
Q Consensus 1 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~ 79 (335)
||++|+++||||+|+||+++++.|+++|++|+++ .|+.....+..+.+... +.++.++.+|++|++++.++++.
T Consensus 1 ~~~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~ 75 (250)
T PRK08063 1 VFSGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEAL-----GRKALAVKANVGDVEKIKEMFAQ 75 (250)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc-----CCeEEEEEcCCCCHHHHHHHHHH
Confidence 5778999999999999999999999999998764 56544333333333221 25688899999999999888875
Q ss_pred -----CCCCEEEEcccccchh----hhhcChHHHHHHhHHHHHHHHHHHHH----cCCCEEEEeccccccCCCCCCCccC
Q 019795 80 -----QKFEAVIHFGALKAVA----ESVQHPFRYFDNNLIGTINLYQAMAK----YNCKKLVFSSSATIYGQPEKIPCVE 146 (335)
Q Consensus 80 -----~~~d~vi~~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~v~~Ss~~vyg~~~~~~~~e 146 (335)
..+|+|||+|+..... .+.+..+..+++|+.++.++++++.+ .+.++||++||...+.
T Consensus 76 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~--------- 146 (250)
T PRK08063 76 IDEEFGRLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKIISLSSLGSIR--------- 146 (250)
T ss_pred HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhcc---------
Confidence 3689999999864321 12334456788999999999998764 3456999999965431
Q ss_pred CCCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 147 DFPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 147 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
+..+...|+.+|.+.|.+++.++.++ .++++.+++|+.+..+
T Consensus 147 --~~~~~~~y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~t~ 190 (250)
T PRK08063 147 --YLENYTTVGVSKAALEALTRYLAVELAPKGIAVNAVSGGAVDTD 190 (250)
T ss_pred --CCCCccHHHHHHHHHHHHHHHHHHHHhHhCeEEEeEecCcccCc
Confidence 23345689999999999999887663 2789999999988765
|
|
| >PRK07775 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=1e-20 Score=166.91 Aligned_cols=172 Identities=19% Similarity=0.207 Sum_probs=130.9
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc---
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS--- 79 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~--- 79 (335)
.+|+++||||+|+||++++++|+++|++|++++|+..........+... ..++.++.+|++|++++.+++++
T Consensus 9 ~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~Dl~~~~~~~~~~~~~~~ 83 (274)
T PRK07775 9 DRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRAD-----GGEAVAFPLDVTDPDSVKSFVAQAEE 83 (274)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-----CCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 3579999999999999999999999999999988654333332223221 14678889999999999888874
Q ss_pred --CCCCEEEEcccccchhh----hhcChHHHHHHhHHHHHHHHHHHHH----cCCCEEEEeccccccCCCCCCCccCCCC
Q 019795 80 --QKFEAVIHFGALKAVAE----SVQHPFRYFDNNLIGTINLYQAMAK----YNCKKLVFSSSATIYGQPEKIPCVEDFP 149 (335)
Q Consensus 80 --~~~d~vi~~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~v~~Ss~~vyg~~~~~~~~e~~~ 149 (335)
..+|+|||+|+...... +.+.++..+++|+.++.++++++.. .+.++||++||...+..
T Consensus 84 ~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~g~iv~isS~~~~~~----------- 152 (274)
T PRK07775 84 ALGEIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERRRGDLIFVGSDVALRQ----------- 152 (274)
T ss_pred hcCCCCEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECChHhcCC-----------
Confidence 36899999998743211 2345567789999999999988653 34568999999876632
Q ss_pred CCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 150 YGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 150 ~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
..+...|+.+|.+.|.+++.++.+. .+++++++||+.+.++
T Consensus 153 ~~~~~~Y~~sK~a~~~l~~~~~~~~~~~gi~v~~v~pG~~~t~ 195 (274)
T PRK07775 153 RPHMGAYGAAKAGLEAMVTNLQMELEGTGVRASIVHPGPTLTG 195 (274)
T ss_pred CCCcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCCcccCc
Confidence 2234579999999999999887653 3899999999877544
|
|
| >PRK12746 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=4.9e-21 Score=167.00 Aligned_cols=172 Identities=16% Similarity=0.138 Sum_probs=129.5
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEE-ecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLI-DNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
++++++||||+|+||++++++|+++|+.|+++ .|+..........+... +..+.++.+|++|.+++.+++++
T Consensus 5 ~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~D~~d~~~i~~~~~~~~ 79 (254)
T PRK12746 5 DGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESN-----GGKAFLIEADLNSIDGVKKLVEQLK 79 (254)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc-----CCcEEEEEcCcCCHHHHHHHHHHHH
Confidence 45899999999999999999999999998775 45433222222222211 14578899999999998887774
Q ss_pred ---------CCCCEEEEcccccchhh----hhcChHHHHHHhHHHHHHHHHHHHHc--CCCEEEEeccccccCCCCCCCc
Q 019795 80 ---------QKFEAVIHFGALKAVAE----SVQHPFRYFDNNLIGTINLYQAMAKY--NCKKLVFSSSATIYGQPEKIPC 144 (335)
Q Consensus 80 ---------~~~d~vi~~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~v~~Ss~~vyg~~~~~~~ 144 (335)
.++|+|||+||...... +.+.++..+++|+.++.++++++.+. ..+++|++||..++.
T Consensus 80 ~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~sS~~~~~------- 152 (254)
T PRK12746 80 NELQIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAEGRVINISSAEVRL------- 152 (254)
T ss_pred HHhccccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECCHHhcC-------
Confidence 26899999998743221 23344677889999999999998763 335899999987763
Q ss_pred cCCCCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 145 VEDFPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 145 ~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
+..+...|+.+|.+.|.+++.++.+. .++++++++|+.++++
T Consensus 153 ----~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~pg~~~t~ 196 (254)
T PRK12746 153 ----GFTGSIAYGLSKGALNTMTLPLAKHLGERGITVNTIMPGYTKTD 196 (254)
T ss_pred ----CCCCCcchHhhHHHHHHHHHHHHHHHhhcCcEEEEEEECCccCc
Confidence 23345679999999999988877653 2799999999998876
|
|
| >PRK06128 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=2.1e-20 Score=167.01 Aligned_cols=174 Identities=15% Similarity=0.126 Sum_probs=133.9
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCc--hhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSV--PEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~--~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~ 79 (335)
+++|++|||||+|+||+++++.|++.|++|+++.++.... ....+.+... ..++.++.+|++|.+++.+++++
T Consensus 53 l~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~Dl~~~~~v~~~~~~ 127 (300)
T PRK06128 53 LQGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAE-----GRKAVALPGDLKDEAFCRQLVER 127 (300)
T ss_pred cCCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHc-----CCeEEEEecCCCCHHHHHHHHHH
Confidence 3468999999999999999999999999998887654321 1222222211 14677899999999998888764
Q ss_pred -----CCCCEEEEcccccch-----hhhhcChHHHHHHhHHHHHHHHHHHHHc--CCCEEEEeccccccCCCCCCCccCC
Q 019795 80 -----QKFEAVIHFGALKAV-----AESVQHPFRYFDNNLIGTINLYQAMAKY--NCKKLVFSSSATIYGQPEKIPCVED 147 (335)
Q Consensus 80 -----~~~d~vi~~a~~~~~-----~~~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~ 147 (335)
.++|+|||+|+.... ..+.++++.++++|+.++.++++++... ...+||++||...|..
T Consensus 128 ~~~~~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~~~~~~--------- 198 (300)
T PRK06128 128 AVKELGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSIQSYQP--------- 198 (300)
T ss_pred HHHHhCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCccccCC---------
Confidence 379999999996321 2245677889999999999999998753 2258999999887632
Q ss_pred CCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCCC
Q 019795 148 FPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGAH 191 (335)
Q Consensus 148 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~~ 191 (335)
......|+.+|.+.+.+++.++.+. .++++.+++|+.+.++.
T Consensus 199 --~~~~~~Y~asK~a~~~~~~~la~el~~~gI~v~~v~PG~i~t~~ 242 (300)
T PRK06128 199 --SPTLLDYASTKAAIVAFTKALAKQVAEKGIRVNAVAPGPVWTPL 242 (300)
T ss_pred --CCCchhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEECcCcCCC
Confidence 2234579999999999999888763 38999999999998873
|
|
| >PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=6.6e-21 Score=165.92 Aligned_cols=172 Identities=17% Similarity=0.123 Sum_probs=129.5
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCC-chhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNS-VPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
+++++|||||+|+||++++++|+++|++|++..|+... .......+... ...+.++.+|+++++++..+++.
T Consensus 5 ~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~ 79 (252)
T PRK06077 5 KDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKEN-----GGEGIGVLADVSTREGCETLAKATI 79 (252)
T ss_pred CCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHc-----CCeeEEEEeccCCHHHHHHHHHHHH
Confidence 46899999999999999999999999999887664322 11111222211 13567889999999988887764
Q ss_pred ---CCCCEEEEcccccchhh----hhcChHHHHHHhHHHHHHHHHHHHHc--CCCEEEEeccccccCCCCCCCccCCCCC
Q 019795 80 ---QKFEAVIHFGALKAVAE----SVQHPFRYFDNNLIGTINLYQAMAKY--NCKKLVFSSSATIYGQPEKIPCVEDFPY 150 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~ 150 (335)
.++|+|||+||...... ..+..+..+++|+.++.++++++.+. ..+++|++||...+. +.
T Consensus 80 ~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~-----------~~ 148 (252)
T PRK06077 80 DRYGVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVAGIR-----------PA 148 (252)
T ss_pred HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchhccC-----------CC
Confidence 37899999999733211 22334578999999999999988754 235899999977663 34
Q ss_pred CCCChhHHhHHHHHHHHHHHHhhC-CCCeEEEEecccccCC
Q 019795 151 GAMNPYGRTKQWCEEIAFDVQKAD-PEWRIILLRYFNPVGA 190 (335)
Q Consensus 151 ~~~~~Y~~sK~~~E~~~~~~~~~~-~~~~~~~lR~~~v~G~ 190 (335)
.+.+.|+.+|...|.+++.++.+. +++.+.+++|+.+.++
T Consensus 149 ~~~~~Y~~sK~~~~~~~~~l~~~~~~~i~v~~v~Pg~i~t~ 189 (252)
T PRK06077 149 YGLSIYGAMKAAVINLTKYLALELAPKIRVNAIAPGFVKTK 189 (252)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHhcCCEEEEEeeCCccCh
Confidence 556789999999999999988875 3688999999988765
|
|
| >COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.87 E-value=6.8e-21 Score=162.54 Aligned_cols=174 Identities=17% Similarity=0.234 Sum_probs=141.9
Q ss_pred CCCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc-
Q 019795 1 MASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS- 79 (335)
Q Consensus 1 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~- 79 (335)
|+++++++|||||++||..+++.|+++|++|+++.|+..++.+..+++.+..+ -.+.++.+|+++.+++..+.+.
T Consensus 3 ~~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~----v~v~vi~~DLs~~~~~~~l~~~l 78 (265)
T COG0300 3 PMKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTG----VEVEVIPADLSDPEALERLEDEL 78 (265)
T ss_pred CCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhC----ceEEEEECcCCChhHHHHHHHHH
Confidence 56788999999999999999999999999999999999888888888876543 5789999999999988887763
Q ss_pred ----CCCCEEEEcccccc----hhhhhcChHHHHHHhHHHHHHHHHHH----HHcCCCEEEEeccccccCCCCCCCccCC
Q 019795 80 ----QKFEAVIHFGALKA----VAESVQHPFRYFDNNLIGTINLYQAM----AKYNCKKLVFSSSATIYGQPEKIPCVED 147 (335)
Q Consensus 80 ----~~~d~vi~~a~~~~----~~~~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~v~~Ss~~vyg~~~~~~~~e~ 147 (335)
..+|++|||||... ...+.+..++++++|+.++..+..+. .+.+.++||+++|...+
T Consensus 79 ~~~~~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G~IiNI~S~ag~----------- 147 (265)
T COG0300 79 KERGGPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGAGHIINIGSAAGL----------- 147 (265)
T ss_pred HhcCCcccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechhhc-----------
Confidence 37999999999853 33355666789999999988888774 45566799999998866
Q ss_pred CCCCCCChhHHhHHHHHHHHHHHHhhCC--CCeEEEEecccccC
Q 019795 148 FPYGAMNPYGRTKQWCEEIAFDVQKADP--EWRIILLRYFNPVG 189 (335)
Q Consensus 148 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~~--~~~~~~lR~~~v~G 189 (335)
.|.+-...|+.||+..-.+......|.. |+.+..+.||-+.-
T Consensus 148 ~p~p~~avY~ATKa~v~~fSeaL~~EL~~~gV~V~~v~PG~~~T 191 (265)
T COG0300 148 IPTPYMAVYSATKAFVLSFSEALREELKGTGVKVTAVCPGPTRT 191 (265)
T ss_pred CCCcchHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEEecCcccc
Confidence 2444456799999998888887777643 68899998866544
|
|
| >PRK05993 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=5.9e-21 Score=168.71 Aligned_cols=168 Identities=20% Similarity=0.227 Sum_probs=128.4
Q ss_pred CCCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc-
Q 019795 1 MASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS- 79 (335)
Q Consensus 1 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~- 79 (335)
|.++|+|+||||+|+||+++++.|+++|++|++++|++..... +.. .++.++.+|++|.+++.++++.
T Consensus 1 m~~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~----l~~-------~~~~~~~~Dl~d~~~~~~~~~~~ 69 (277)
T PRK05993 1 MDMKRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAA----LEA-------EGLEAFQLDYAEPESIAALVAQV 69 (277)
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHH----HHH-------CCceEEEccCCCHHHHHHHHHHH
Confidence 6778999999999999999999999999999999997543322 211 3577899999999988877764
Q ss_pred -----CCCCEEEEcccccchh----hhhcChHHHHHHhHHHHHH----HHHHHHHcCCCEEEEeccccccCCCCCCCccC
Q 019795 80 -----QKFEAVIHFGALKAVA----ESVQHPFRYFDNNLIGTIN----LYQAMAKYNCKKLVFSSSATIYGQPEKIPCVE 146 (335)
Q Consensus 80 -----~~~d~vi~~a~~~~~~----~~~~~~~~~~~~nv~~~~~----l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~e 146 (335)
..+|+|||+||..... .+.+..+..+++|+.|+.. ++..+++.+.++||++||...+.
T Consensus 70 ~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~~g~iv~isS~~~~~--------- 140 (277)
T PRK05993 70 LELSGGRLDALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQGQGRIVQCSSILGLV--------- 140 (277)
T ss_pred HHHcCCCccEEEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcCCCEEEEECChhhcC---------
Confidence 3689999999874321 2334556789999999555 45556666677999999965431
Q ss_pred CCCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 147 DFPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 147 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
+..+...|+.||...|.+++.++.+. .++++++++|+.+-.+
T Consensus 141 --~~~~~~~Y~asK~a~~~~~~~l~~el~~~gi~v~~v~Pg~v~T~ 184 (277)
T PRK05993 141 --PMKYRGAYNASKFAIEGLSLTLRMELQGSGIHVSLIEPGPIETR 184 (277)
T ss_pred --CCCccchHHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCCccCc
Confidence 33445689999999999988876442 2899999999877543
|
|
| >PRK12935 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.1e-20 Score=164.07 Aligned_cols=173 Identities=17% Similarity=0.085 Sum_probs=129.2
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCC-CchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc-
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHN-SVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~- 79 (335)
+++++++||||+|+||++++++|+++|++|+++.+... ......+.+.. .+.++.++.+|++|++++.+++++
T Consensus 4 ~~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~-----~~~~~~~~~~D~~~~~~~~~~~~~~ 78 (247)
T PRK12935 4 LNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGK-----EGHDVYAVQADVSKVEDANRLVEEA 78 (247)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHh-----cCCeEEEEECCCCCHHHHHHHHHHH
Confidence 35689999999999999999999999999987654322 22222222221 114688999999999999988875
Q ss_pred ----CCCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHHHH----cCCCEEEEeccccccCCCCCCCccCC
Q 019795 80 ----QKFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAMAK----YNCKKLVFSSSATIYGQPEKIPCVED 147 (335)
Q Consensus 80 ----~~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~v~~Ss~~vyg~~~~~~~~e~ 147 (335)
..+|+|||+|+.... ..+.+.++..+++|+.++.++++++.. .+.+++|++||...+.
T Consensus 79 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~---------- 148 (247)
T PRK12935 79 VNHFGKVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISSIIGQA---------- 148 (247)
T ss_pred HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchhhcC----------
Confidence 468999999997432 123356778899999999999999764 3346899999965431
Q ss_pred CCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 148 FPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 148 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
+..+...|+.+|.+.+.+++.+..+. .++++++++|+.+.++
T Consensus 149 -~~~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~ 192 (247)
T PRK12935 149 -GGFGQTNYSAAKAGMLGFTKSLALELAKTNVTVNAICPGFIDTE 192 (247)
T ss_pred -CCCCCcchHHHHHHHHHHHHHHHHHHHHcCcEEEEEEeCCCcCh
Confidence 12345689999999998887776552 2899999999988664
|
|
| >PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.1e-20 Score=164.40 Aligned_cols=172 Identities=14% Similarity=0.095 Sum_probs=135.2
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
+++|++|||||+|+||++++++|+++|++|++++|++.......+.+.. ...+.++.+|++|++++.++++.
T Consensus 3 ~~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~------~~~~~~~~~D~~~~~~~~~~~~~~~ 76 (251)
T PRK07231 3 LEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILA------GGRAIAVAADVSDEADVEAAVAAAL 76 (251)
T ss_pred cCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc------CCeEEEEECCCCCHHHHHHHHHHHH
Confidence 4678999999999999999999999999999999986554444333322 14678999999999999988764
Q ss_pred ---CCCCEEEEcccccch-----hhhhcChHHHHHHhHHHHHHHHHHHHH----cCCCEEEEeccccccCCCCCCCccCC
Q 019795 80 ---QKFEAVIHFGALKAV-----AESVQHPFRYFDNNLIGTINLYQAMAK----YNCKKLVFSSSATIYGQPEKIPCVED 147 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~~-----~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~v~~Ss~~vyg~~~~~~~~e~ 147 (335)
..+|+|||+|+.... ..+.+.++..+++|+.++.++++.+.. .+.++||++||...++
T Consensus 77 ~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~---------- 146 (251)
T PRK07231 77 ERFGSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEGGGAIVNVASTAGLR---------- 146 (251)
T ss_pred HHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhcC----------
Confidence 278999999987322 223456678899999999888887654 4567899999977653
Q ss_pred CCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 148 FPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 148 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
+..+...|+.+|...+.+++.++.++ .++++.+++|+.+.++
T Consensus 147 -~~~~~~~y~~sk~~~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~ 190 (251)
T PRK07231 147 -PRPGLGWYNASKGAVITLTKALAAELGPDKIRVNAVAPVVVETG 190 (251)
T ss_pred -CCCCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEECccCCC
Confidence 33445689999999999998887663 2789999999988654
|
|
| >PRK09186 flagellin modification protein A; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=3.5e-20 Score=161.80 Aligned_cols=186 Identities=19% Similarity=0.166 Sum_probs=135.3
Q ss_pred CCCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc-
Q 019795 1 MASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS- 79 (335)
Q Consensus 1 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~- 79 (335)
|+++|+|+||||+|+||+++++.|+++|++|++++|++.......+.+....+ ...+.++.+|++|++++.++++.
T Consensus 1 ~~~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~---~~~~~~~~~Dl~d~~~~~~~~~~~ 77 (256)
T PRK09186 1 MLKGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFK---SKKLSLVELDITDQESLEEFLSKS 77 (256)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcC---CCceeEEEecCCCHHHHHHHHHHH
Confidence 78899999999999999999999999999999999876655444444432111 13466779999999999888874
Q ss_pred ----CCCCEEEEcccccc-------hhhhhcChHHHHHHhHHHHHHHHHHHH----HcCCCEEEEeccccccCCCCCCCc
Q 019795 80 ----QKFEAVIHFGALKA-------VAESVQHPFRYFDNNLIGTINLYQAMA----KYNCKKLVFSSSATIYGQPEKIPC 144 (335)
Q Consensus 80 ----~~~d~vi~~a~~~~-------~~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~v~~Ss~~vyg~~~~~~~ 144 (335)
..+|+|||+|+... ...+.+.+...+++|+.++..+++++. +.+.+++|++||.+.+..+.. ..
T Consensus 78 ~~~~~~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~-~~ 156 (256)
T PRK09186 78 AEKYGKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQGGGNLVNISSIYGVVAPKF-EI 156 (256)
T ss_pred HHHcCCccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCceEEEEechhhhccccc-hh
Confidence 34899999997431 112334566788999999888777654 345679999999665432211 11
Q ss_pred cCCCCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 145 VEDFPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 145 ~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
.++.+......|+.+|...+.+++.++.+. .++++.+++|+.++++
T Consensus 157 ~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~i~v~~i~Pg~~~~~ 204 (256)
T PRK09186 157 YEGTSMTSPVEYAAIKAGIIHLTKYLAKYFKDSNIRVNCVSPGGILDN 204 (256)
T ss_pred ccccccCCcchhHHHHHHHHHHHHHHHHHhCcCCeEEEEEecccccCC
Confidence 233333333479999999999998777763 3789999999987654
|
|
| >PRK07806 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=6.6e-21 Score=165.58 Aligned_cols=176 Identities=18% Similarity=0.132 Sum_probs=127.8
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCC-chhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc-
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNS-VPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~- 79 (335)
+++|+++||||+||||++++++|+++|++|++++|+... .......+... +.++.++.+|++|++++.++++.
T Consensus 4 ~~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~-----~~~~~~~~~D~~~~~~~~~~~~~~ 78 (248)
T PRK07806 4 LPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAA-----GGRASAVGADLTDEESVAALMDTA 78 (248)
T ss_pred CCCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhc-----CCceEEEEcCCCCHHHHHHHHHHH
Confidence 556899999999999999999999999999999886532 22222223221 14578899999999998887764
Q ss_pred ----CCCCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHc--CCCEEEEeccccccCCCCCCCccCCCCCCCC
Q 019795 80 ----QKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKY--NCKKLVFSSSATIYGQPEKIPCVEDFPYGAM 153 (335)
Q Consensus 80 ----~~~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~ 153 (335)
..+|+|||+|+.... ...++...+++|+.++.++++++.+. ...++|++||........ .+ +....
T Consensus 79 ~~~~~~~d~vi~~ag~~~~--~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~----~~--~~~~~ 150 (248)
T PRK07806 79 REEFGGLDALVLNASGGME--SGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTSHQAHFIPT----VK--TMPEY 150 (248)
T ss_pred HHhCCCCcEEEECCCCCCC--CCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeCchhhcCcc----cc--CCccc
Confidence 369999999986422 22345678899999999999998864 235899999954321110 01 11225
Q ss_pred ChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 154 NPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 154 ~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
..|+.+|..+|.+++.++.+. .++++++++|+.+-++
T Consensus 151 ~~Y~~sK~a~e~~~~~l~~~~~~~~i~v~~v~pg~~~~~ 189 (248)
T PRK07806 151 EPVARSKRAGEDALRALRPELAEKGIGFVVVSGDMIEGT 189 (248)
T ss_pred cHHHHHHHHHHHHHHHHHHHhhccCeEEEEeCCccccCc
Confidence 689999999999999887653 2688888887765443
|
|
| >PRK06179 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=9e-21 Score=166.90 Aligned_cols=166 Identities=17% Similarity=0.220 Sum_probs=132.9
Q ss_pred CCCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc-
Q 019795 1 MASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS- 79 (335)
Q Consensus 1 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~- 79 (335)
|+++++++||||||+||++++++|+++|++|++++|+...... ..++.++.+|++|++++.++++.
T Consensus 1 m~~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~-------------~~~~~~~~~D~~d~~~~~~~~~~~ 67 (270)
T PRK06179 1 MSNSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAP-------------IPGVELLELDVTDDASVQAAVDEV 67 (270)
T ss_pred CCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhccc-------------cCCCeeEEeecCCHHHHHHHHHHH
Confidence 7788999999999999999999999999999999997543211 14678899999999999988874
Q ss_pred ----CCCCEEEEcccccchh----hhhcChHHHHHHhHHHHHHHHHHH----HHcCCCEEEEeccccccCCCCCCCccCC
Q 019795 80 ----QKFEAVIHFGALKAVA----ESVQHPFRYFDNNLIGTINLYQAM----AKYNCKKLVFSSSATIYGQPEKIPCVED 147 (335)
Q Consensus 80 ----~~~d~vi~~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~v~~Ss~~vyg~~~~~~~~e~ 147 (335)
..+|+|||+||..... .+.++++.++++|+.++.++++++ ++.+.++||++||...+.
T Consensus 68 ~~~~g~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~---------- 137 (270)
T PRK06179 68 IARAGRIDVLVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQGSGRIINISSVLGFL---------- 137 (270)
T ss_pred HHhCCCCCEEEECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEECCccccC----------
Confidence 3689999999974321 234456788999999999999984 455678999999966542
Q ss_pred CCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 148 FPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 148 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
+......|+.+|...+.+++.++.+. .++++++++|+.+.++
T Consensus 138 -~~~~~~~Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~~~t~ 181 (270)
T PRK06179 138 -PAPYMALYAASKHAVEGYSESLDHEVRQFGIRVSLVEPAYTKTN 181 (270)
T ss_pred -CCCCccHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeCCCcccc
Confidence 22234579999999999988876552 3899999999998776
|
|
| >PRK06196 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.5e-20 Score=169.22 Aligned_cols=180 Identities=18% Similarity=0.132 Sum_probs=133.1
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
+++|+|+||||||+||++++++|+++|++|++++|+.....+....+ ..+.++.+|++|.++++++++.
T Consensus 24 l~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l---------~~v~~~~~Dl~d~~~v~~~~~~~~ 94 (315)
T PRK06196 24 LSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGI---------DGVEVVMLDLADLESVRAFAERFL 94 (315)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---------hhCeEEEccCCCHHHHHHHHHHHH
Confidence 45789999999999999999999999999999999755433332222 2378899999999999887764
Q ss_pred ---CCCCEEEEcccccch--hhhhcChHHHHHHhHHHHHHHHHHHH----HcCCCEEEEeccccccCC-CCCCCccCCCC
Q 019795 80 ---QKFEAVIHFGALKAV--AESVQHPFRYFDNNLIGTINLYQAMA----KYNCKKLVFSSSATIYGQ-PEKIPCVEDFP 149 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~~--~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~v~~Ss~~vyg~-~~~~~~~e~~~ 149 (335)
.++|+|||+||.... ....+.++..+++|+.++..+++.+. +.+..++|++||...... ..........+
T Consensus 95 ~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~~ 174 (315)
T PRK06196 95 DSGRRIDILINNAGVMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAAGAGARVVALSSAGHRRSPIRWDDPHFTRG 174 (315)
T ss_pred hcCCCCCEEEECCCCCCCCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEECCHHhccCCCCccccCccCC
Confidence 479999999997432 12234567889999999888777643 444469999999654321 11111111223
Q ss_pred CCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 150 YGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 150 ~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
..+...|+.||.+.+.+++.++.+. .++++++++|+.+.++
T Consensus 175 ~~~~~~Y~~SK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~t~ 217 (315)
T PRK06196 175 YDKWLAYGQSKTANALFAVHLDKLGKDQGVRAFSVHPGGILTP 217 (315)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeeCCcccCC
Confidence 4455679999999999998887653 3799999999999887
|
|
| >PRK12827 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.8e-20 Score=161.54 Aligned_cols=178 Identities=16% Similarity=0.093 Sum_probs=135.4
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
+++|+++||||+|+||+++++.|+++|++|++++|...........+..... .....+.++.+|++|.+++.++++.
T Consensus 4 ~~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 82 (249)
T PRK12827 4 LDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIE-AAGGKALGLAFDVRDFAATRAALDAGV 82 (249)
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHH-hcCCcEEEEEccCCCHHHHHHHHHHHH
Confidence 4578999999999999999999999999999988754433333322221111 1124688999999999998887753
Q ss_pred ---CCCCEEEEcccccc----hhhhhcChHHHHHHhHHHHHHHHHHHH-----HcCCCEEEEeccccccCCCCCCCccCC
Q 019795 80 ---QKFEAVIHFGALKA----VAESVQHPFRYFDNNLIGTINLYQAMA-----KYNCKKLVFSSSATIYGQPEKIPCVED 147 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~----~~~~~~~~~~~~~~nv~~~~~l~~~~~-----~~~~~~~v~~Ss~~vyg~~~~~~~~e~ 147 (335)
.++|+|||+|+... ...+.+++...+++|+.++.++++++. +.+.+++|++||...+.
T Consensus 83 ~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~---------- 152 (249)
T PRK12827 83 EEFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARRGGRIVNIASVAGVR---------- 152 (249)
T ss_pred HHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCCeEEEEECCchhcC----------
Confidence 47999999999754 222344567889999999999999987 34557899999976652
Q ss_pred CCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCCC
Q 019795 148 FPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGAH 191 (335)
Q Consensus 148 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~~ 191 (335)
+..+...|+.+|...+.+++.++.+. .+++++++||+.+.++.
T Consensus 153 -~~~~~~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~ 197 (249)
T PRK12827 153 -GNRGQVNYAASKAGLIGLTKTLANELAPRGITVNAVAPGAINTPM 197 (249)
T ss_pred -CCCCCchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEEECCcCCCc
Confidence 22344679999999999998887663 27999999999998873
|
|
| >PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.7e-20 Score=155.43 Aligned_cols=150 Identities=27% Similarity=0.336 Sum_probs=121.8
Q ss_pred EEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCCCEEE
Q 019795 7 ILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKFEAVI 86 (335)
Q Consensus 7 vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~d~vi 86 (335)
|+|+||||++|+.++++|+++|++|+++.|++.+... ..+++++.+|+.|.+.+.++++ ++|+||
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~-------------~~~~~~~~~d~~d~~~~~~al~--~~d~vi 65 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED-------------SPGVEIIQGDLFDPDSVKAALK--GADAVI 65 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH-------------CTTEEEEESCTTCHHHHHHHHT--TSSEEE
T ss_pred eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc-------------ccccccceeeehhhhhhhhhhh--hcchhh
Confidence 7999999999999999999999999999998664432 1789999999999999999999 899999
Q ss_pred EcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccCCCCCCCccCCCCCCCCChhHHhHHHHHHH
Q 019795 87 HFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQWCEEI 166 (335)
Q Consensus 87 ~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~Y~~sK~~~E~~ 166 (335)
++++.... ....+.+++++|++.+++++|++|+.++|+........+. ......|...|..+|++
T Consensus 66 ~~~~~~~~-------------~~~~~~~~~~a~~~~~~~~~v~~s~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~e~~ 130 (183)
T PF13460_consen 66 HAAGPPPK-------------DVDAAKNIIEAAKKAGVKRVVYLSSAGVYRDPPGLFSDED--KPIFPEYARDKREAEEA 130 (183)
T ss_dssp ECCHSTTT-------------HHHHHHHHHHHHHHTTSSEEEEEEETTGTTTCTSEEEGGT--CGGGHHHHHHHHHHHHH
T ss_pred hhhhhhcc-------------cccccccccccccccccccceeeeccccCCCCCccccccc--ccchhhhHHHHHHHHHH
Confidence 99876322 1677889999999999999999999999875432211111 11124688999888888
Q ss_pred HHHHHhhCCCCeEEEEecccccCCC
Q 019795 167 AFDVQKADPEWRIILLRYFNPVGAH 191 (335)
Q Consensus 167 ~~~~~~~~~~~~~~~lR~~~v~G~~ 191 (335)
++ +. +++++++||+.+||+.
T Consensus 131 ~~----~~-~~~~~ivrp~~~~~~~ 150 (183)
T PF13460_consen 131 LR----ES-GLNWTIVRPGWIYGNP 150 (183)
T ss_dssp HH----HS-TSEEEEEEESEEEBTT
T ss_pred HH----hc-CCCEEEEECcEeEeCC
Confidence 74 23 8999999999999984
|
... |
| >COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.4e-20 Score=154.71 Aligned_cols=170 Identities=18% Similarity=0.200 Sum_probs=135.9
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
+++|.++|||||++||.++++.|.+.|++|++..|+....++..+++.+ ..+..+..|++|.+++.+++..
T Consensus 4 ~~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~-------~~~~~~~~DVtD~~~~~~~i~~~~ 76 (246)
T COG4221 4 LKGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGA-------GAALALALDVTDRAAVEAAIEALP 76 (246)
T ss_pred CCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhcc-------CceEEEeeccCCHHHHHHHHHHHH
Confidence 3568899999999999999999999999999999987777666665532 3678899999999987766653
Q ss_pred ---CCCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHHH----HcCCCEEEEeccccccCCCCCCCccCCC
Q 019795 80 ---QKFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAMA----KYNCKKLVFSSSATIYGQPEKIPCVEDF 148 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~v~~Ss~~vyg~~~~~~~~e~~ 148 (335)
.++|++||+||.... ....++|+.++++|+.|.++..++.. +.+.++||++||.+-- .
T Consensus 77 ~~~g~iDiLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN~~SiAG~-----------~ 145 (246)
T COG4221 77 EEFGRIDILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLGSIAGR-----------Y 145 (246)
T ss_pred HhhCcccEEEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEEecccccc-----------c
Confidence 479999999997432 23457888999999999999999853 4455699999996531 2
Q ss_pred CCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccC
Q 019795 149 PYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVG 189 (335)
Q Consensus 149 ~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G 189 (335)
++...+.|+.+|.....+......+. .+++++.+-|+.|-.
T Consensus 146 ~y~~~~vY~ATK~aV~~fs~~LR~e~~g~~IRVt~I~PG~v~~ 188 (246)
T COG4221 146 PYPGGAVYGATKAAVRAFSLGLRQELAGTGIRVTVISPGLVET 188 (246)
T ss_pred cCCCCccchhhHHHHHHHHHHHHHHhcCCCeeEEEecCceecc
Confidence 55556789999999999988887774 478889888877633
|
|
| >PRK12828 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=3.7e-20 Score=159.78 Aligned_cols=170 Identities=15% Similarity=0.114 Sum_probs=131.9
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc---
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS--- 79 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~--- 79 (335)
++|++|||||+|+||+++++.|+++|++|++++|++.+..+..+.+.. ..+.++.+|++|.+++.++++.
T Consensus 6 ~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~-------~~~~~~~~D~~~~~~~~~~~~~~~~ 78 (239)
T PRK12828 6 QGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPA-------DALRIGGIDLVDPQAARRAVDEVNR 78 (239)
T ss_pred CCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhh-------cCceEEEeecCCHHHHHHHHHHHHH
Confidence 458999999999999999999999999999999976554443333322 3567788999999988887764
Q ss_pred --CCCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHHH----HcCCCEEEEeccccccCCCCCCCccCCCC
Q 019795 80 --QKFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAMA----KYNCKKLVFSSSATIYGQPEKIPCVEDFP 149 (335)
Q Consensus 80 --~~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~ 149 (335)
.++|+|||+++.... ....+.++..+++|+.++.++++++. +.+.+++|++||...++.
T Consensus 79 ~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~----------- 147 (239)
T PRK12828 79 QFGRLDALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASGGGRIVNIGAGAALKA----------- 147 (239)
T ss_pred HhCCcCEEEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcCCCEEEEECchHhccC-----------
Confidence 378999999986321 12334455778899999999998864 345789999999877642
Q ss_pred CCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 150 YGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 150 ~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
..+...|+.+|...+.+++.++.+. .++++.++||+.++++
T Consensus 148 ~~~~~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~i~pg~v~~~ 190 (239)
T PRK12828 148 GPGMGAYAAAKAGVARLTEALAAELLDRGITVNAVLPSIIDTP 190 (239)
T ss_pred CCCcchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCc
Confidence 2345679999999998888766542 2899999999999886
|
|
| >PRK09134 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.3e-19 Score=158.56 Aligned_cols=173 Identities=19% Similarity=0.165 Sum_probs=128.0
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCC-chhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc-
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNS-VPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~- 79 (335)
.++|++|||||+|+||+++++.|+++|++|+++++.... .......+... +..+.++.+|++|.+++.++++.
T Consensus 7 ~~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~Dl~d~~~~~~~~~~~ 81 (258)
T PRK09134 7 AAPRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRAL-----GRRAVALQADLADEAEVRALVARA 81 (258)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc-----CCeEEEEEcCCCCHHHHHHHHHHH
Confidence 457899999999999999999999999999887764322 22222222211 14688899999999999888764
Q ss_pred ----CCCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHHHHc----CCCEEEEeccccccCCCCCCCccCC
Q 019795 80 ----QKFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAMAKY----NCKKLVFSSSATIYGQPEKIPCVED 147 (335)
Q Consensus 80 ----~~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~~v~~Ss~~vyg~~~~~~~~e~ 147 (335)
.++|+|||+|+.... ....+.++.++++|+.++.++++++... +-+++|++||...+.
T Consensus 82 ~~~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~s~~~~~---------- 151 (258)
T PRK09134 82 SAALGPITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNMIDQRVWN---------- 151 (258)
T ss_pred HHHcCCCCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECchhhcC----------
Confidence 368999999986322 2234566788999999999999987653 235788888755432
Q ss_pred CCCCCCChhHHhHHHHHHHHHHHHhhC-CCCeEEEEecccccCC
Q 019795 148 FPYGAMNPYGRTKQWCEEIAFDVQKAD-PEWRIILLRYFNPVGA 190 (335)
Q Consensus 148 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~-~~~~~~~lR~~~v~G~ 190 (335)
+......|+.+|...|.+++.++.+. +.+.+.+++|+.++..
T Consensus 152 -~~p~~~~Y~~sK~a~~~~~~~la~~~~~~i~v~~i~PG~v~t~ 194 (258)
T PRK09134 152 -LNPDFLSYTLSKAALWTATRTLAQALAPRIRVNAIGPGPTLPS 194 (258)
T ss_pred -CCCCchHHHHHHHHHHHHHHHHHHHhcCCcEEEEeecccccCC
Confidence 11223479999999999999988765 2488999999877653
|
|
| >PRK06138 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=2e-20 Score=162.96 Aligned_cols=173 Identities=12% Similarity=0.067 Sum_probs=134.1
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
+++|+++||||+|+||++|+++|+++|++|++++|+........+.+. .+..+.++.+|++|++++.++++.
T Consensus 3 ~~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~------~~~~~~~~~~D~~~~~~~~~~~~~i~ 76 (252)
T PRK06138 3 LAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIA------AGGRAFARQGDVGSAEAVEALVDFVA 76 (252)
T ss_pred CCCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHh------cCCeEEEEEcCCCCHHHHHHHHHHHH
Confidence 578999999999999999999999999999999987544333333222 124688999999999999888764
Q ss_pred ---CCCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHH----HHcCCCEEEEeccccccCCCCCCCccCCC
Q 019795 80 ---QKFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAM----AKYNCKKLVFSSSATIYGQPEKIPCVEDF 148 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~ 148 (335)
..+|+|||+|+.... ..+.+.++..+++|+.++.++++++ ++.+.+++|++||.....
T Consensus 77 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~----------- 145 (252)
T PRK06138 77 ARWGRLDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQGGGSIVNTASQLALA----------- 145 (252)
T ss_pred HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCeEEEEECChhhcc-----------
Confidence 379999999997432 2234556678999999998887765 345567999999975431
Q ss_pred CCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCCC
Q 019795 149 PYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGAH 191 (335)
Q Consensus 149 ~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~~ 191 (335)
+..+...|+.+|...+.+++.++.+. .+++++++||+.++++.
T Consensus 146 ~~~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~ 190 (252)
T PRK06138 146 GGRGRAAYVASKGAIASLTRAMALDHATDGIRVNAVAPGTIDTPY 190 (252)
T ss_pred CCCCccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEECCccCcc
Confidence 12334679999999999999887664 27999999999998873
|
|
| >TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.7e-20 Score=161.83 Aligned_cols=174 Identities=14% Similarity=0.162 Sum_probs=135.0
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
+++|++|||||+|+||++++++|++.|++|++++|+........+.+... +..+.++.+|++|.+++.++++.
T Consensus 1 ~~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~d~~~~~~~~~~~~~~~ 75 (250)
T TIGR03206 1 LKDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAK-----GGNAQAFACDITDRDSVDTAVAAAE 75 (250)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhc-----CCcEEEEEcCCCCHHHHHHHHHHHH
Confidence 46899999999999999999999999999999998765444333333221 24688999999999998887763
Q ss_pred ---CCCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHHH----HcCCCEEEEeccccccCCCCCCCccCCC
Q 019795 80 ---QKFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAMA----KYNCKKLVFSSSATIYGQPEKIPCVEDF 148 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~v~~Ss~~vyg~~~~~~~~e~~ 148 (335)
..+|+|||+|+.... ..+.+.++..+++|+.++.++++++. +.+.+++|++||...++..
T Consensus 76 ~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~iss~~~~~~~--------- 146 (250)
T TIGR03206 76 QALGPVDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERGAGRIVNIASDAARVGS--------- 146 (250)
T ss_pred HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEECchhhccCC---------
Confidence 368999999986321 22334456789999999999988865 4456799999998776422
Q ss_pred CCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCCC
Q 019795 149 PYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGAH 191 (335)
Q Consensus 149 ~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~~ 191 (335)
.....|+.+|.+.+.+++.++.+. .++++.++||+.++++.
T Consensus 147 --~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~~~~ 189 (250)
T TIGR03206 147 --SGEAVYAACKGGLVAFSKTMAREHARHGITVNVVCPGPTDTAL 189 (250)
T ss_pred --CCCchHHHHHHHHHHHHHHHHHHHhHhCcEEEEEecCcccchh
Confidence 234579999999999988887663 27999999999998873
|
Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. |
| >PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=4e-20 Score=161.84 Aligned_cols=170 Identities=18% Similarity=0.120 Sum_probs=130.1
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
+++|+++||||+|+||++++++|+++|++|++++|+.. .....+.+... ...+.++.+|++|.+++.++++.
T Consensus 6 ~~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~-~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~ 79 (260)
T PRK12823 6 FAGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSEL-VHEVAAELRAA-----GGEALALTADLETYAGAQAAMAAAV 79 (260)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchH-HHHHHHHHHhc-----CCeEEEEEEeCCCHHHHHHHHHHHH
Confidence 45689999999999999999999999999999998642 22222333221 14577899999999888877764
Q ss_pred ---CCCCEEEEcccccc-----hhhhhcChHHHHHHhHHHHHHHHHHHH----HcCCCEEEEeccccccCCCCCCCccCC
Q 019795 80 ---QKFEAVIHFGALKA-----VAESVQHPFRYFDNNLIGTINLYQAMA----KYNCKKLVFSSSATIYGQPEKIPCVED 147 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~-----~~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~v~~Ss~~vyg~~~~~~~~e~ 147 (335)
..+|++||+|+... ...+.++++..+++|+.++..+++.+. +.+.++||++||...++.
T Consensus 80 ~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~--------- 150 (260)
T PRK12823 80 EAFGRIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQGGGAIVNVSSIATRGI--------- 150 (260)
T ss_pred HHcCCCeEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEcCccccCC---------
Confidence 37999999998521 122345566788999999887776644 445578999999876531
Q ss_pred CCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 148 FPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 148 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
+..+|+.+|.+.+.+++.++.++ .++++.+++|+.++++
T Consensus 151 ----~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~ 191 (260)
T PRK12823 151 ----NRVPYSAAKGGVNALTASLAFEYAEHGIRVNAVAPGGTEAP 191 (260)
T ss_pred ----CCCccHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccCCc
Confidence 23479999999999999888764 3799999999999987
|
|
| >PLN02253 xanthoxin dehydrogenase | Back alignment and domain information |
|---|
Probab=99.86 E-value=7.1e-20 Score=162.07 Aligned_cols=171 Identities=19% Similarity=0.182 Sum_probs=130.8
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
+++|++|||||+|+||++++++|+++|++|++++|+..........+. . ..++.++.+|++|.+++.++++.
T Consensus 16 l~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~---~---~~~~~~~~~Dl~d~~~~~~~~~~~~ 89 (280)
T PLN02253 16 LLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLG---G---EPNVCFFHCDVTVEDDVSRAVDFTV 89 (280)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhc---C---CCceEEEEeecCCHHHHHHHHHHHH
Confidence 457899999999999999999999999999999986543332222221 1 14688999999999999888774
Q ss_pred ---CCCCEEEEcccccch------hhhhcChHHHHHHhHHHHHHHHHHHHH----cCCCEEEEeccccc-cCCCCCCCcc
Q 019795 80 ---QKFEAVIHFGALKAV------AESVQHPFRYFDNNLIGTINLYQAMAK----YNCKKLVFSSSATI-YGQPEKIPCV 145 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~~------~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~v~~Ss~~v-yg~~~~~~~~ 145 (335)
.++|+|||+||.... ..+.++++.++++|+.++.++++++.. .+.+++|++||... ++.
T Consensus 90 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~------- 162 (280)
T PLN02253 90 DKFGTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVASAIGG------- 162 (280)
T ss_pred HHhCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCceEEEecChhhcccC-------
Confidence 379999999987422 123456778999999999999998754 23357888888543 321
Q ss_pred CCCCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 146 EDFPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 146 e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
.....|+.+|.+.|.+++.++.+. +++++.+++|+.+..+
T Consensus 163 -----~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~ 204 (280)
T PLN02253 163 -----LGPHAYTGSKHAVLGLTRSVAAELGKHGIRVNCVSPYAVPTA 204 (280)
T ss_pred -----CCCcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccccc
Confidence 123479999999999999888764 3789999999988765
|
|
| >PRK07024 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=2.6e-20 Score=162.81 Aligned_cols=171 Identities=15% Similarity=0.134 Sum_probs=129.5
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc---
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS--- 79 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~--- 79 (335)
++|+|+||||+|+||+++++.|+++|++|++++|+.....+..+.+.. . .++.++.+|++|++++.++++.
T Consensus 1 ~~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~-----~-~~~~~~~~Dl~~~~~i~~~~~~~~~ 74 (257)
T PRK07024 1 MPLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPK-----A-ARVSVYAADVRDADALAAAAADFIA 74 (257)
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccc-----C-CeeEEEEcCCCCHHHHHHHHHHHHH
Confidence 357999999999999999999999999999999875443332222211 0 2688999999999999887764
Q ss_pred --CCCCEEEEcccccchh-----hhhcChHHHHHHhHHHHHHHHHH----HHHcCCCEEEEeccccccCCCCCCCccCCC
Q 019795 80 --QKFEAVIHFGALKAVA-----ESVQHPFRYFDNNLIGTINLYQA----MAKYNCKKLVFSSSATIYGQPEKIPCVEDF 148 (335)
Q Consensus 80 --~~~d~vi~~a~~~~~~-----~~~~~~~~~~~~nv~~~~~l~~~----~~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~ 148 (335)
..+|++||+||..... .+.+.++..+++|+.++.+++++ +++.+.+++|++||...+.
T Consensus 75 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~~~~iv~isS~~~~~----------- 143 (257)
T PRK07024 75 AHGLPDVVIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAARRGTLVGIASVAGVR----------- 143 (257)
T ss_pred hCCCCCEEEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcCCCEEEEEechhhcC-----------
Confidence 3589999999974321 23355678899999999998874 4455567999999865431
Q ss_pred CCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 149 PYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 149 ~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
+......|+.+|...+.+++.+..+. .+++++++||+.+.++
T Consensus 144 ~~~~~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~ 187 (257)
T PRK07024 144 GLPGAGAYSASKAAAIKYLESLRVELRPAGVRVVTIAPGYIRTP 187 (257)
T ss_pred CCCCCcchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCcCc
Confidence 22234579999999999998876442 3899999999998775
|
|
| >PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=3.2e-20 Score=173.96 Aligned_cols=176 Identities=18% Similarity=0.138 Sum_probs=131.7
Q ss_pred CCCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhc----CCccccceeEEEccCCCHHHHHHH
Q 019795 1 MASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLA----GPELAKKLEFHVGDLRNKDDLDKL 76 (335)
Q Consensus 1 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~----~~~~~~~i~~~~~Dl~d~~~~~~~ 76 (335)
|+++++||||||+|+||++++++|+++|++|++++|+..........+.+.. +.....++.++.+|++|.+++.++
T Consensus 77 ~~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~a 156 (576)
T PLN03209 77 TKDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGPA 156 (576)
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHHH
Confidence 4577899999999999999999999999999999997665443333222110 000113588999999999999998
Q ss_pred HhcCCCCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccCCCCCCCccCCCCCCCCChh
Q 019795 77 FSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQPEKIPCVEDFPYGAMNPY 156 (335)
Q Consensus 77 ~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~Y 156 (335)
+. ++|+|||++|.... ...++...+++|+.|+.+++++|+..++++||++||.+.+... ..+. .......|
T Consensus 157 Lg--giDiVVn~AG~~~~--~v~d~~~~~~VN~~Gt~nLl~Aa~~agVgRIV~VSSiga~~~g----~p~~-~~~sk~~~ 227 (576)
T PLN03209 157 LG--NASVVICCIGASEK--EVFDVTGPYRIDYLATKNLVDAATVAKVNHFILVTSLGTNKVG----FPAA-ILNLFWGV 227 (576)
T ss_pred hc--CCCEEEEccccccc--cccchhhHHHHHHHHHHHHHHHHHHhCCCEEEEEccchhcccC----cccc-chhhHHHH
Confidence 87 89999999987421 1224556788999999999999999999999999997653111 0011 12233457
Q ss_pred HHhHHHHHHHHHHHHhhCCCCeEEEEecccccCC
Q 019795 157 GRTKQWCEEIAFDVQKADPEWRIILLRYFNPVGA 190 (335)
Q Consensus 157 ~~sK~~~E~~~~~~~~~~~~~~~~~lR~~~v~G~ 190 (335)
...|..+|+.+.. . +++++++||+.++++
T Consensus 228 ~~~KraaE~~L~~----s-GIrvTIVRPG~L~tp 256 (576)
T PLN03209 228 LCWKRKAEEALIA----S-GLPYTIVRPGGMERP 256 (576)
T ss_pred HHHHHHHHHHHHH----c-CCCEEEEECCeecCC
Confidence 7888888888753 3 999999999998876
|
|
| >PRK06182 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.85 E-value=3.1e-20 Score=163.75 Aligned_cols=167 Identities=16% Similarity=0.100 Sum_probs=127.5
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
|++|+++||||+|+||++++++|+++|++|++++|+..... .+.. .++.++.+|++|++++.++++.
T Consensus 1 ~~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~----~~~~-------~~~~~~~~Dv~~~~~~~~~~~~~~ 69 (273)
T PRK06182 1 MQKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKME----DLAS-------LGVHPLSLDVTDEASIKAAVDTII 69 (273)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHH----HHHh-------CCCeEEEeeCCCHHHHHHHHHHHH
Confidence 46889999999999999999999999999999998643321 1111 3578899999999999888764
Q ss_pred ---CCCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHH----HHHcCCCEEEEeccccccCCCCCCCccCCC
Q 019795 80 ---QKFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQA----MAKYNCKKLVFSSSATIYGQPEKIPCVEDF 148 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~----~~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~ 148 (335)
.++|+|||+||.... ..+.++++..+++|+.++..+++. +++.+.+++|++||...+.
T Consensus 70 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~----------- 138 (273)
T PRK06182 70 AEEGRIDVLVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQRSGRIINISSMGGKI----------- 138 (273)
T ss_pred HhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhcC-----------
Confidence 379999999997432 123456778899999997666664 5556667999999965321
Q ss_pred CCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 149 PYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 149 ~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
+......|+.+|...+.+++.++.+. .+++++++||+.+.++
T Consensus 139 ~~~~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~ 182 (273)
T PRK06182 139 YTPLGAWYHATKFALEGFSDALRLEVAPFGIDVVVIEPGGIKTE 182 (273)
T ss_pred CCCCccHhHHHHHHHHHHHHHHHHHhcccCCEEEEEecCCcccc
Confidence 11223469999999999987766442 2899999999999776
|
|
| >PRK07060 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.2e-19 Score=157.20 Aligned_cols=168 Identities=17% Similarity=0.143 Sum_probs=130.4
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc-CC
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-QK 81 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-~~ 81 (335)
++|+++||||+|+||+++++.|+++|++|++++|+...... +.+. .+..++.+|+++.+++.++++. ..
T Consensus 8 ~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~----~~~~------~~~~~~~~D~~~~~~v~~~~~~~~~ 77 (245)
T PRK07060 8 SGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDR----LAGE------TGCEPLRLDVGDDAAIRAALAAAGA 77 (245)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHH----HHHH------hCCeEEEecCCCHHHHHHHHHHhCC
Confidence 35899999999999999999999999999999986543221 2111 2356788999999999888875 35
Q ss_pred CCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHHHHc----C-CCEEEEeccccccCCCCCCCccCCCCCCC
Q 019795 82 FEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAMAKY----N-CKKLVFSSSATIYGQPEKIPCVEDFPYGA 152 (335)
Q Consensus 82 ~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~~----~-~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~ 152 (335)
+|+|||+|+.... ..+.++++..+++|+.++.++++++.+. + .+++|++||...+. +..+
T Consensus 78 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~-----------~~~~ 146 (245)
T PRK07060 78 FDGLVNCAGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAALV-----------GLPD 146 (245)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHcC-----------CCCC
Confidence 8999999987432 2234456678889999999999987653 2 36899999976552 2234
Q ss_pred CChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCCC
Q 019795 153 MNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGAH 191 (335)
Q Consensus 153 ~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~~ 191 (335)
...|+.+|...|.+++.++.++ .++++.++||+.++++.
T Consensus 147 ~~~y~~sK~a~~~~~~~~a~~~~~~~i~v~~v~pg~v~~~~ 187 (245)
T PRK07060 147 HLAYCASKAALDAITRVLCVELGPHGIRVNSVNPTVTLTPM 187 (245)
T ss_pred CcHhHHHHHHHHHHHHHHHHHHhhhCeEEEEEeeCCCCCch
Confidence 4679999999999999888763 27999999999998874
|
|
| >PRK12939 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.7e-19 Score=156.85 Aligned_cols=172 Identities=15% Similarity=0.135 Sum_probs=132.6
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc---
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS--- 79 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~--- 79 (335)
++|+++||||+|+||+++++.|+++|++|++++|++.......+.+... ..++.++.+|++|++++.++++.
T Consensus 6 ~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~Dl~~~~~~~~~~~~~~~ 80 (250)
T PRK12939 6 AGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAA-----GGRAHAIAADLADPASVQRFFDAAAA 80 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc-----CCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 3689999999999999999999999999999988765444444443321 14688999999999999888864
Q ss_pred --CCCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHHHHc----CCCEEEEeccccccCCCCCCCccCCCC
Q 019795 80 --QKFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAMAKY----NCKKLVFSSSATIYGQPEKIPCVEDFP 149 (335)
Q Consensus 80 --~~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~~v~~Ss~~vyg~~~~~~~~e~~~ 149 (335)
.++|+|||+++.... ..+.+.++..++.|+.++.++++++... +.+++|++||...+. +
T Consensus 81 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~-----------~ 149 (250)
T PRK12939 81 ALGGLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLASDTALW-----------G 149 (250)
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECchhhcc-----------C
Confidence 479999999997432 2233456678899999999999987542 345899999966542 2
Q ss_pred CCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 150 YGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 150 ~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
......|+.+|...|.+++.++.++ .++.+.+++|+.+..+
T Consensus 150 ~~~~~~y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~ 192 (250)
T PRK12939 150 APKLGAYVASKGAVIGMTRSLARELGGRGITVNAIAPGLTATE 192 (250)
T ss_pred CCCcchHHHHHHHHHHHHHHHHHHHhhhCEEEEEEEECCCCCc
Confidence 2234579999999999999877653 3789999999987665
|
|
| >KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.85 E-value=4.6e-20 Score=168.00 Aligned_cols=255 Identities=22% Similarity=0.157 Sum_probs=178.9
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCC---CeEEEEecCCCCchhhHHhhhhh-----------cCCccccceeEEEccC
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGG---FKVVLIDNLHNSVPEAVDRVKDL-----------AGPELAKKLEFHVGDL 67 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~~~~~~~~-----------~~~~~~~~i~~~~~Dl 67 (335)
+.+|+|+|||||||+|.-|++.|++.. -.++++-|.+. ..+..+++... ..++.-.++..+.||+
T Consensus 10 ~~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~-g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GDi 88 (467)
T KOG1221|consen 10 YKNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKK-GKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGDI 88 (467)
T ss_pred hCCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCC-CCCHHHHHHHHHhhhHHHHHHhhCccceecceeccccc
Confidence 468999999999999999999999864 25666666433 23333333221 1122236788999999
Q ss_pred CCH------HHHHHHHhcCCCCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHc-CCCEEEEeccccccCCC-
Q 019795 68 RNK------DDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKY-NCKKLVFSSSATIYGQP- 139 (335)
Q Consensus 68 ~d~------~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~-~~~~~v~~Ss~~vyg~~- 139 (335)
+++ .+++.+.+ .+|+|||+||-..+.+. .+....+|+.|+.++++.|++. +.+-+||+||+.+.-..
T Consensus 89 ~~~~LGis~~D~~~l~~--eV~ivih~AAtvrFde~---l~~al~iNt~Gt~~~l~lak~~~~l~~~vhVSTAy~n~~~~ 163 (467)
T KOG1221|consen 89 SEPDLGISESDLRTLAD--EVNIVIHSAATVRFDEP---LDVALGINTRGTRNVLQLAKEMVKLKALVHVSTAYSNCNVG 163 (467)
T ss_pred cCcccCCChHHHHHHHh--cCCEEEEeeeeeccchh---hhhhhhhhhHhHHHHHHHHHHhhhhheEEEeehhheecccc
Confidence 853 56666666 89999999997654332 3366889999999999999987 56899999998764111
Q ss_pred --CCCCccCCC--C------------------------CCCCChhHHhHHHHHHHHHHHHhhCCCCeEEEEecccccCCC
Q 019795 140 --EKIPCVEDF--P------------------------YGAMNPYGRTKQWCEEIAFDVQKADPEWRIILLRYFNPVGAH 191 (335)
Q Consensus 140 --~~~~~~e~~--~------------------------~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~lR~~~v~G~~ 191 (335)
...++.+.. + ....+.|..+|+++|+++.+.+. +++++|+||+.|....
T Consensus 164 ~i~E~~y~~~~~~~~~~~i~~~~~~~~~~ld~~~~~l~~~~PNTYtfTKal~E~~i~~~~~---~lPivIiRPsiI~st~ 240 (467)
T KOG1221|consen 164 HIEEKPYPMPETCNPEKILKLDENLSDELLDQKAPKLLGGWPNTYTFTKALAEMVIQKEAE---NLPLVIIRPSIITSTY 240 (467)
T ss_pred cccccccCccccCCHHHHHhhhccchHHHHHHhhHHhcCCCCCceeehHhhHHHHHHhhcc---CCCeEEEcCCceeccc
Confidence 111111110 0 01245699999999999877654 8999999999999998
Q ss_pred CCCCCCCCCCCCCCChHHHHHHHHhCCCCceeEecccCCCCCCceeeeeeeHhhhhc------------c----CceEEe
Q 019795 192 ESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAVRDYIHVMDLAD------------G----CIAYNL 255 (335)
Q Consensus 192 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~v~~~D~~~------------~----~~~~nv 255 (335)
..+..|+-.+.. .....+.....|... .+.+ |.+...|+|.+|.+++ . ..+||+
T Consensus 241 ~EP~pGWidn~~--gp~g~i~g~gkGvlr--~~~~------d~~~~adiIPvD~vvN~~ia~~~~~~~~~~~~~~~IY~~ 310 (467)
T KOG1221|consen 241 KEPFPGWIDNLN--GPDGVIIGYGKGVLR--CFLV------DPKAVADIIPVDMVVNAMIASAWQHAGNSKEKTPPIYHL 310 (467)
T ss_pred cCCCCCccccCC--CCceEEEEeccceEE--EEEE------ccccccceeeHHHHHHHHHHHHHHHhccCCCCCCcEEEe
Confidence 777777665532 222333333333322 3344 6788899999999987 2 339999
Q ss_pred cCC--ccccHHHHHHHHHHHhC
Q 019795 256 GNG--KGISVLEMVAAFEKASG 275 (335)
Q Consensus 256 ~~~--~~~s~~el~~~i~~~~g 275 (335)
+++ ++++|.++++...+...
T Consensus 311 tss~~Np~t~~~~~e~~~~~~~ 332 (467)
T KOG1221|consen 311 TSSNDNPVTWGDFIELALRYFE 332 (467)
T ss_pred cccccCcccHHHHHHHHHHhcc
Confidence 987 46999999999999865
|
|
| >PRK05854 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=5.9e-20 Score=164.97 Aligned_cols=186 Identities=17% Similarity=0.114 Sum_probs=140.8
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
+++|+++|||||++||.+++++|+++|++|++++|+..+..+..+.+....+ ...+.++.+|++|.++++++++.
T Consensus 12 l~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~---~~~v~~~~~Dl~d~~sv~~~~~~~~ 88 (313)
T PRK05854 12 LSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVP---DAKLSLRALDLSSLASVAALGEQLR 88 (313)
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCC---CCceEEEEecCCCHHHHHHHHHHHH
Confidence 4679999999999999999999999999999999986655555555543221 14688999999999999888764
Q ss_pred ---CCCCEEEEcccccch---hhhhcChHHHHHHhHHHHHHHHHHHHH---cCCCEEEEeccccc-cCCCCCCCccCCCC
Q 019795 80 ---QKFEAVIHFGALKAV---AESVQHPFRYFDNNLIGTINLYQAMAK---YNCKKLVFSSSATI-YGQPEKIPCVEDFP 149 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~~---~~~~~~~~~~~~~nv~~~~~l~~~~~~---~~~~~~v~~Ss~~v-yg~~~~~~~~e~~~ 149 (335)
.++|++||+||.... ..+.+.++..+.+|+.++..+++.+.. .+..++|++||... ++........++.+
T Consensus 89 ~~~~~iD~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~~~riv~vsS~~~~~~~~~~~~~~~~~~ 168 (313)
T PRK05854 89 AEGRPIHLLINNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLLPLLRAGRARVTSQSSIAARRGAINWDDLNWERS 168 (313)
T ss_pred HhCCCccEEEECCccccCCccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhCCCCeEEEechhhcCCCcCccccccccc
Confidence 368999999997432 224467788999999999988887653 23458999999654 33323333444445
Q ss_pred CCCCChhHHhHHHHHHHHHHHHhhC----CCCeEEEEecccccCC
Q 019795 150 YGAMNPYGRTKQWCEEIAFDVQKAD----PEWRIILLRYFNPVGA 190 (335)
Q Consensus 150 ~~~~~~Y~~sK~~~E~~~~~~~~~~----~~~~~~~lR~~~v~G~ 190 (335)
..+...|+.||.+.+.++++++++. .++.+.++.||.|-..
T Consensus 169 ~~~~~~Y~~SK~a~~~~~~~la~~~~~~~~gI~v~~v~PG~v~T~ 213 (313)
T PRK05854 169 YAGMRAYSQSKIAVGLFALELDRRSRAAGWGITSNLAHPGVAPTN 213 (313)
T ss_pred CcchhhhHHHHHHHHHHHHHHHHHhhcCCCCeEEEEEecceeccC
Confidence 5666789999999999999887641 2689999999987543
|
|
| >PRK06197 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=4.2e-20 Score=165.60 Aligned_cols=185 Identities=15% Similarity=0.094 Sum_probs=131.3
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc---
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS--- 79 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~--- 79 (335)
++|+|+||||+|+||++++++|+++|++|++++|+........+.+....+ ...+.++.+|++|.++++++++.
T Consensus 15 ~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~---~~~~~~~~~Dl~d~~~v~~~~~~~~~ 91 (306)
T PRK06197 15 SGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATP---GADVTLQELDLTSLASVRAAADALRA 91 (306)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCC---CCceEEEECCCCCHHHHHHHHHHHHh
Confidence 468999999999999999999999999999999976554443344332111 14678899999999999888764
Q ss_pred --CCCCEEEEcccccchh--hhhcChHHHHHHhHHHHHHHHHH----HHHcCCCEEEEecccccc--CCCCCCCccCCCC
Q 019795 80 --QKFEAVIHFGALKAVA--ESVQHPFRYFDNNLIGTINLYQA----MAKYNCKKLVFSSSATIY--GQPEKIPCVEDFP 149 (335)
Q Consensus 80 --~~~d~vi~~a~~~~~~--~~~~~~~~~~~~nv~~~~~l~~~----~~~~~~~~~v~~Ss~~vy--g~~~~~~~~e~~~ 149 (335)
.++|+|||+||..... .+.+.++..+++|+.++..+.+. +++.+.+++|++||...+ +........++.+
T Consensus 92 ~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~~~ 171 (306)
T PRK06197 92 AYPRIDLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLLPVPGSRVVTVSSGGHRIRAAIHFDDLQWERR 171 (306)
T ss_pred hCCCCCEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEECCHHHhccCCCCccccCcccC
Confidence 3699999999974322 23456678899999996655554 555555799999997643 3222112222234
Q ss_pred CCCCChhHHhHHHHHHHHHHHHhhC--CCCeE--EEEecccccCC
Q 019795 150 YGAMNPYGRTKQWCEEIAFDVQKAD--PEWRI--ILLRYFNPVGA 190 (335)
Q Consensus 150 ~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~--~~lR~~~v~G~ 190 (335)
..+...|+.||.+.+.+++.++.+. .++++ +++.||.|..+
T Consensus 172 ~~~~~~Y~~SK~a~~~~~~~la~~l~~~~i~v~~v~~~PG~v~T~ 216 (306)
T PRK06197 172 YNRVAAYGQSKLANLLFTYELQRRLAAAGATTIAVAAHPGVSNTE 216 (306)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCeEEEEeCCCcccCc
Confidence 4556789999999999999888764 24444 44578877544
|
|
| >PRK08213 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=1e-19 Score=159.13 Aligned_cols=177 Identities=19% Similarity=0.149 Sum_probs=132.6
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
+++|++|||||+|+||+++++.|+++|++|++++|+....+...+.+... +.++.++.+|++|.+++.++++.
T Consensus 10 ~~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~-----~~~~~~~~~Dl~d~~~i~~~~~~~~ 84 (259)
T PRK08213 10 LSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEAL-----GIDALWIAADVADEADIERLAEETL 84 (259)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc-----CCeEEEEEccCCCHHHHHHHHHHHH
Confidence 46799999999999999999999999999999998754433333333221 14677899999999999776654
Q ss_pred ---CCCCEEEEcccccc----hhhhhcChHHHHHHhHHHHHHHHHHHHHc-----CCCEEEEeccccccCCCCCCCccCC
Q 019795 80 ---QKFEAVIHFGALKA----VAESVQHPFRYFDNNLIGTINLYQAMAKY-----NCKKLVFSSSATIYGQPEKIPCVED 147 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~----~~~~~~~~~~~~~~nv~~~~~l~~~~~~~-----~~~~~v~~Ss~~vyg~~~~~~~~e~ 147 (335)
..+|+|||+|+... ...+.+.++..+++|+.++.++++++... +.+++|++||...+.....
T Consensus 85 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS~~~~~~~~~------ 158 (259)
T PRK08213 85 ERFGHVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVASVAGLGGNPP------ 158 (259)
T ss_pred HHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCc------
Confidence 36899999998632 22234456678999999999999987543 5578999999765432110
Q ss_pred CCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 148 FPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 148 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
...+...|+.+|+..|.+++.++.++ +++++.+++|+.+-.+
T Consensus 159 -~~~~~~~Y~~sKa~~~~~~~~~a~~~~~~gi~v~~v~Pg~~~t~ 202 (259)
T PRK08213 159 -EVMDTIAYNTSKGAVINFTRALAAEWGPHGIRVNAIAPGFFPTK 202 (259)
T ss_pred -cccCcchHHHHHHHHHHHHHHHHHHhcccCEEEEEEecCcCCCc
Confidence 11244689999999999999988764 2788999999776443
|
|
| >PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=99.84 E-value=5.3e-19 Score=153.32 Aligned_cols=173 Identities=18% Similarity=0.151 Sum_probs=128.6
Q ss_pred CCCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCc-hhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc
Q 019795 1 MASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSV-PEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS 79 (335)
Q Consensus 1 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~ 79 (335)
|+++|+++||||||+||+++++.|+++|++|+++.|+.... ....+.+... ...+.++.+|+++.+++.++++.
T Consensus 2 ~~~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~Dl~~~~~~~~~~~~ 76 (248)
T PRK05557 2 SLEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGAL-----GGKALAVQGDVSDAESVERAVDE 76 (248)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhc-----CCceEEEEcCCCCHHHHHHHHHH
Confidence 45678999999999999999999999999998888765432 2222222211 25688899999999998887764
Q ss_pred -----CCCCEEEEcccccchh----hhhcChHHHHHHhHHHHHHHHHHHHHc----CCCEEEEecccc-ccCCCCCCCcc
Q 019795 80 -----QKFEAVIHFGALKAVA----ESVQHPFRYFDNNLIGTINLYQAMAKY----NCKKLVFSSSAT-IYGQPEKIPCV 145 (335)
Q Consensus 80 -----~~~d~vi~~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~~v~~Ss~~-vyg~~~~~~~~ 145 (335)
.++|+|||+|+..... ...+.++..++.|+.++.++++++... +.+++|++||.. ++|.
T Consensus 77 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~iss~~~~~~~------- 149 (248)
T PRK05557 77 AKAEFGGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISSVVGLMGN------- 149 (248)
T ss_pred HHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcccccCcCC-------
Confidence 3689999999874321 223455678899999999999987653 456899999853 3432
Q ss_pred CCCCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 146 EDFPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 146 e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
.....|+.+|...+.+++.++.+. .++.++++||+.+.++
T Consensus 150 -----~~~~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~v~pg~~~~~ 191 (248)
T PRK05557 150 -----PGQANYAASKAGVIGFTKSLARELASRGITVNAVAPGFIETD 191 (248)
T ss_pred -----CCCchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCccCCc
Confidence 234579999999998888776542 2789999999877544
|
|
| >PRK07985 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.6e-19 Score=159.46 Aligned_cols=173 Identities=16% Similarity=0.146 Sum_probs=131.7
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCC--chhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNS--VPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~ 79 (335)
+++|++|||||+|+||+++++.|+++|++|++++|+... .....+.+.+ . +..+.++.+|++|.+++.++++.
T Consensus 47 ~~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~Dl~~~~~~~~~~~~ 121 (294)
T PRK07985 47 LKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEE-C----GRKAVLLPGDLSDEKFARSLVHE 121 (294)
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHH-c----CCeEEEEEccCCCHHHHHHHHHH
Confidence 456899999999999999999999999999988765332 1111111111 1 14577899999999988877664
Q ss_pred -----CCCCEEEEcccccc-----hhhhhcChHHHHHHhHHHHHHHHHHHHHc--CCCEEEEeccccccCCCCCCCccCC
Q 019795 80 -----QKFEAVIHFGALKA-----VAESVQHPFRYFDNNLIGTINLYQAMAKY--NCKKLVFSSSATIYGQPEKIPCVED 147 (335)
Q Consensus 80 -----~~~d~vi~~a~~~~-----~~~~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~ 147 (335)
.++|++||+|+... ...+.++++..+++|+.++.++++++... ..+++|++||...+..
T Consensus 122 ~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~~~~~~--------- 192 (294)
T PRK07985 122 AHKALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQAYQP--------- 192 (294)
T ss_pred HHHHhCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCchhccC---------
Confidence 36899999998631 12245667789999999999999998653 2258999999876632
Q ss_pred CCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 148 FPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 148 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
......|+.+|...+.+++.++.+. .++++.+++|+.|+++
T Consensus 193 --~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~i~PG~v~t~ 235 (294)
T PRK07985 193 --SPHLLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTA 235 (294)
T ss_pred --CCCcchhHHHHHHHHHHHHHHHHHHhHhCcEEEEEECCcCccc
Confidence 2234579999999999999888763 2899999999999887
|
|
| >PRK08628 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.6e-19 Score=157.89 Aligned_cols=172 Identities=17% Similarity=0.154 Sum_probs=133.9
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
+++|++|||||+|+||+++++.|++.|++|++++|++... ...+.+... ..++.++.+|+++++++.++++.
T Consensus 5 l~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~-~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~ 78 (258)
T PRK08628 5 LKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDD-EFAEELRAL-----QPRAEFVQVDLTDDAQCRDAVEQTV 78 (258)
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhH-HHHHHHHhc-----CCceEEEEccCCCHHHHHHHHHHHH
Confidence 5678999999999999999999999999999999876544 333333222 14688999999999999888874
Q ss_pred ---CCCCEEEEcccccch---hhhhcChHHHHHHhHHHHHHHHHHHHH---cCCCEEEEeccccccCCCCCCCccCCCCC
Q 019795 80 ---QKFEAVIHFGALKAV---AESVQHPFRYFDNNLIGTINLYQAMAK---YNCKKLVFSSSATIYGQPEKIPCVEDFPY 150 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~~---~~~~~~~~~~~~~nv~~~~~l~~~~~~---~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~ 150 (335)
..+|+|||+||.... ....++++..+++|+.++.++++.+.+ .+.+++|++||...+. +.
T Consensus 79 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~-----------~~ 147 (258)
T PRK08628 79 AKFGRIDGLVNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLPHLKASRGAIVNISSKTALT-----------GQ 147 (258)
T ss_pred HhcCCCCEEEECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhhccCcEEEEECCHHhcc-----------CC
Confidence 378999999996321 112255678899999999999998754 2336899999966541 22
Q ss_pred CCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 151 GAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 151 ~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
.+...|+.+|...+.+++.++.+. .++++..++|+.++++
T Consensus 148 ~~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~pg~v~t~ 189 (258)
T PRK08628 148 GGTSGYAAAKGAQLALTREWAVALAKDGVRVNAVIPAEVMTP 189 (258)
T ss_pred CCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCH
Confidence 345689999999999999887652 3799999999999886
|
|
| >PRK12747 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.2e-19 Score=158.12 Aligned_cols=174 Identities=19% Similarity=0.118 Sum_probs=129.6
Q ss_pred CCCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEec-CCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc
Q 019795 1 MASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDN-LHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS 79 (335)
Q Consensus 1 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~ 79 (335)
|+++|+++||||+|+||++++++|++.|++|++..+ +..........+... ...+..+.+|+++.+++..+++.
T Consensus 1 ~~~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~ 75 (252)
T PRK12747 1 MLKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSN-----GGSAFSIGANLESLHGVEALYSS 75 (252)
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhc-----CCceEEEecccCCHHHHHHHHHH
Confidence 788999999999999999999999999999988753 323323333333221 13567788999998777655542
Q ss_pred -----------CCCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHHHHc--CCCEEEEeccccccCCCCCC
Q 019795 80 -----------QKFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAMAKY--NCKKLVFSSSATIYGQPEKI 142 (335)
Q Consensus 80 -----------~~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~v~~Ss~~vyg~~~~~ 142 (335)
.++|++||+||.... ..+.+.++.++++|+.++..+++++... ...+||++||...+.
T Consensus 76 ~~~~~~~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~----- 150 (252)
T PRK12747 76 LDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRI----- 150 (252)
T ss_pred HHHHhhhhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCccccc-----
Confidence 169999999996321 1233446788999999999999987653 235899999976542
Q ss_pred CccCCCCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 143 PCVEDFPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 143 ~~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
+......|+.||+..+.+++.++.++ .++++.++.|+.|.++
T Consensus 151 ------~~~~~~~Y~~sKaa~~~~~~~la~e~~~~girvn~v~Pg~v~t~ 194 (252)
T PRK12747 151 ------SLPDFIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFIKTD 194 (252)
T ss_pred ------CCCCchhHHHHHHHHHHHHHHHHHHHhHcCCEEEEEecCCccCc
Confidence 22334689999999999999887763 2799999999988776
|
|
| >PRK06500 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.5e-19 Score=157.01 Aligned_cols=168 Identities=20% Similarity=0.151 Sum_probs=128.0
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc---
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS--- 79 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~--- 79 (335)
++|+++||||+|+||++++++|+++|++|++++|+........+.+ +..+.++.+|++|.+++..+++.
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~--------~~~~~~~~~D~~~~~~~~~~~~~~~~ 76 (249)
T PRK06500 5 QGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAEL--------GESALVIRADAGDVAAQKALAQALAE 76 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHh--------CCceEEEEecCCCHHHHHHHHHHHHH
Confidence 4589999999999999999999999999999988643222222111 14677899999998887766553
Q ss_pred --CCCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHHHHc--CCCEEEEecc-ccccCCCCCCCccCCCCC
Q 019795 80 --QKFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAMAKY--NCKKLVFSSS-ATIYGQPEKIPCVEDFPY 150 (335)
Q Consensus 80 --~~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~v~~Ss-~~vyg~~~~~~~~e~~~~ 150 (335)
.++|+|||+|+.... ..+.+.++..+++|+.++.++++++... ...++|++|| .+.||.
T Consensus 77 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~i~~~S~~~~~~~------------ 144 (249)
T PRK06500 77 AFGRLDAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLANPASIVLNGSINAHIGM------------ 144 (249)
T ss_pred HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEechHhccCC------------
Confidence 378999999987432 2244567789999999999999998752 2346777777 444432
Q ss_pred CCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 151 GAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 151 ~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
.....|+.+|...|.+++.++.+. .++++.++||+.++++
T Consensus 145 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~~~t~ 186 (249)
T PRK06500 145 PNSSVYAASKAALLSLAKTLSGELLPRGIRVNAVSPGPVQTP 186 (249)
T ss_pred CCccHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCCCH
Confidence 234689999999999998877653 3899999999999886
|
|
| >PRK06101 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.7e-19 Score=156.00 Aligned_cols=167 Identities=16% Similarity=0.118 Sum_probs=127.4
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcC--C
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQ--K 81 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~--~ 81 (335)
|++++||||||+||++++++|+++|++|++++|++....+ +... ..++.++.+|++|++++.++++.. .
T Consensus 1 ~~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~----~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~ 71 (240)
T PRK06101 1 MTAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDE----LHTQ-----SANIFTLAFDVTDHPGTKAALSQLPFI 71 (240)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHH----HHHh-----cCCCeEEEeeCCCHHHHHHHHHhcccC
Confidence 5799999999999999999999999999999996433222 2111 145788999999999999998852 4
Q ss_pred CCEEEEcccccchh----hhhcChHHHHHHhHHHHHHHHHHHHHc--CCCEEEEeccccccCCCCCCCccCCCCCCCCCh
Q 019795 82 FEAVIHFGALKAVA----ESVQHPFRYFDNNLIGTINLYQAMAKY--NCKKLVFSSSATIYGQPEKIPCVEDFPYGAMNP 155 (335)
Q Consensus 82 ~d~vi~~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~ 155 (335)
+|.+||+|+..... .+.+.++.++++|+.++.++++++... +.+++|++||.... .+......
T Consensus 72 ~d~~i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~isS~~~~-----------~~~~~~~~ 140 (240)
T PRK06101 72 PELWIFNAGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSCGHRVVIVGSIASE-----------LALPRAEA 140 (240)
T ss_pred CCEEEEcCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCeEEEEechhhc-----------cCCCCCch
Confidence 79999999853211 133445678999999999999998753 23579998885421 12233458
Q ss_pred hHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 156 YGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 156 Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
|+.+|...+.+++.++.+. .+++++++||+.++++
T Consensus 141 Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~pg~i~t~ 177 (240)
T PRK06101 141 YGASKAAVAYFARTLQLDLRPKGIEVVTVFPGFVATP 177 (240)
T ss_pred hhHHHHHHHHHHHHHHHHHHhcCceEEEEeCCcCCCC
Confidence 9999999999998877432 3899999999999886
|
|
| >PRK08643 acetoin reductase; Validated | Back alignment and domain information |
|---|
Probab=99.83 E-value=2.6e-19 Score=156.29 Aligned_cols=172 Identities=17% Similarity=0.129 Sum_probs=130.7
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc---
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS--- 79 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~--- 79 (335)
|+|+++||||+|+||+++++.|+++|++|++++|+..........+.+. ..++.++.+|++|++++.++++.
T Consensus 1 ~~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~Dl~~~~~~~~~~~~~~~ 75 (256)
T PRK08643 1 MSKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKD-----GGKAIAVKADVSDRDQVFAAVRQVVD 75 (256)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-----CCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 4689999999999999999999999999999998765544444433321 14678899999999988887774
Q ss_pred --CCCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHHHHc----C-CCEEEEeccccccCCCCCCCccCCC
Q 019795 80 --QKFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAMAKY----N-CKKLVFSSSATIYGQPEKIPCVEDF 148 (335)
Q Consensus 80 --~~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~~----~-~~~~v~~Ss~~vyg~~~~~~~~e~~ 148 (335)
.++|+|||+|+.... ..+.+.++..+++|+.++..+++++.+. + ..++|++||...+.
T Consensus 76 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~----------- 144 (256)
T PRK08643 76 TFGDLNVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAGVV----------- 144 (256)
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECcccccc-----------
Confidence 368999999987422 1123456688999999998888876542 2 35899999865431
Q ss_pred CCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 149 PYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 149 ~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
+......|+.+|...+.+++.++.+. .++++.+++|+.+..+
T Consensus 145 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~ 188 (256)
T PRK08643 145 GNPELAVYSSTKFAVRGLTQTAARDLASEGITVNAYAPGIVKTP 188 (256)
T ss_pred CCCCCchhHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcCh
Confidence 12234679999999999998888763 2789999999988765
|
|
| >PRK08219 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=2.7e-19 Score=153.26 Aligned_cols=165 Identities=14% Similarity=0.150 Sum_probs=122.8
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcC-C
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQ-K 81 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~-~ 81 (335)
+||++|||||+|+||+++++.|+++ ++|++++|+...... +.+.. ..+.++.+|++|++++.++++.. +
T Consensus 2 ~~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~----~~~~~-----~~~~~~~~D~~~~~~~~~~~~~~~~ 71 (227)
T PRK08219 2 ERPTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDE----LAAEL-----PGATPFPVDLTDPEAIAAAVEQLGR 71 (227)
T ss_pred CCCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHH----HHHHh-----ccceEEecCCCCHHHHHHHHHhcCC
Confidence 4789999999999999999999999 999999986433221 11111 35788999999999999988753 6
Q ss_pred CCEEEEcccccchh----hhhcChHHHHHHhHHHHHHHHHHH----HHcCCCEEEEeccccccCCCCCCCccCCCCCCCC
Q 019795 82 FEAVIHFGALKAVA----ESVQHPFRYFDNNLIGTINLYQAM----AKYNCKKLVFSSSATIYGQPEKIPCVEDFPYGAM 153 (335)
Q Consensus 82 ~d~vi~~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~ 153 (335)
+|+|||+++..... ...+.+...++.|+.++.++.+.+ ++. .+++|++||...++. ..+.
T Consensus 72 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~v~~ss~~~~~~-----------~~~~ 139 (227)
T PRK08219 72 LDVLVHNAGVADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAA-HGHVVFINSGAGLRA-----------NPGW 139 (227)
T ss_pred CCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-CCeEEEEcchHhcCc-----------CCCC
Confidence 99999999874321 123445677899999966666654 333 468999999776532 2334
Q ss_pred ChhHHhHHHHHHHHHHHHhhCCC-CeEEEEecccccC
Q 019795 154 NPYGRTKQWCEEIAFDVQKADPE-WRIILLRYFNPVG 189 (335)
Q Consensus 154 ~~Y~~sK~~~E~~~~~~~~~~~~-~~~~~lR~~~v~G 189 (335)
..|+.+|...+.+++.++.+... +++..++|+.+.+
T Consensus 140 ~~y~~~K~a~~~~~~~~~~~~~~~i~~~~i~pg~~~~ 176 (227)
T PRK08219 140 GSYAASKFALRALADALREEEPGNVRVTSVHPGRTDT 176 (227)
T ss_pred chHHHHHHHHHHHHHHHHHHhcCCceEEEEecCCccc
Confidence 67999999999999888776545 7888888876543
|
|
| >PRK06398 aldose dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.83 E-value=2.3e-19 Score=156.92 Aligned_cols=162 Identities=15% Similarity=0.129 Sum_probs=129.1
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
+++|++|||||+|+||+++++.|+++|++|++++|+.... ..+.++.+|++|++++.++++.
T Consensus 4 l~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~----------------~~~~~~~~D~~~~~~i~~~~~~~~ 67 (258)
T PRK06398 4 LKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSY----------------NDVDYFKVDVSNKEQVIKGIDYVI 67 (258)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCcccc----------------CceEEEEccCCCHHHHHHHHHHHH
Confidence 3569999999999999999999999999999999865321 3577899999999998887764
Q ss_pred ---CCCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHHHH----cCCCEEEEeccccccCCCCCCCccCCC
Q 019795 80 ---QKFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAMAK----YNCKKLVFSSSATIYGQPEKIPCVEDF 148 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~v~~Ss~~vyg~~~~~~~~e~~ 148 (335)
..+|+|||+||.... ..+.++++..+++|+.++..+++++.+ .+.+++|++||...+.
T Consensus 68 ~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~----------- 136 (258)
T PRK06398 68 SKYGRIDILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKGVIINIASVQSFA----------- 136 (258)
T ss_pred HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeCcchhcc-----------
Confidence 379999999997421 223456678899999999999988653 3457999999976552
Q ss_pred CCCCCChhHHhHHHHHHHHHHHHhhCC-CCeEEEEecccccCC
Q 019795 149 PYGAMNPYGRTKQWCEEIAFDVQKADP-EWRIILLRYFNPVGA 190 (335)
Q Consensus 149 ~~~~~~~Y~~sK~~~E~~~~~~~~~~~-~~~~~~lR~~~v~G~ 190 (335)
+..+...|+.+|...+.+++.++.+.. .+++.+++|+.+-.+
T Consensus 137 ~~~~~~~Y~~sKaal~~~~~~la~e~~~~i~vn~i~PG~v~T~ 179 (258)
T PRK06398 137 VTRNAAAYVTSKHAVLGLTRSIAVDYAPTIRCVAVCPGSIRTP 179 (258)
T ss_pred CCCCCchhhhhHHHHHHHHHHHHHHhCCCCEEEEEecCCccch
Confidence 334556899999999999999888752 488899999877544
|
|
| >PRK06701 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=3.2e-19 Score=158.54 Aligned_cols=172 Identities=15% Similarity=0.142 Sum_probs=132.6
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCch-hhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVP-EAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
++|++|||||+|+||++++++|+++|++|++++|+..... ...+.+.. ...++.++.+|++|.+++.++++.
T Consensus 45 ~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~-----~~~~~~~~~~Dl~~~~~~~~~~~~i~ 119 (290)
T PRK06701 45 KGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEK-----EGVKCLLIPGDVSDEAFCKDAVEETV 119 (290)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHh-----cCCeEEEEEccCCCHHHHHHHHHHHH
Confidence 4689999999999999999999999999999998754322 22222211 124678899999999998888764
Q ss_pred ---CCCCEEEEcccccch-----hhhhcChHHHHHHhHHHHHHHHHHHHHc--CCCEEEEeccccccCCCCCCCccCCCC
Q 019795 80 ---QKFEAVIHFGALKAV-----AESVQHPFRYFDNNLIGTINLYQAMAKY--NCKKLVFSSSATIYGQPEKIPCVEDFP 149 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~~-----~~~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~ 149 (335)
.++|+|||+|+.... ..+.+.+...+++|+.++.++++++... ..+++|++||...|...
T Consensus 120 ~~~~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS~~~~~~~---------- 189 (290)
T PRK06701 120 RELGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGSITGYEGN---------- 189 (290)
T ss_pred HHcCCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEecccccCCC----------
Confidence 378999999986422 1233456788999999999999998753 23589999998776321
Q ss_pred CCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 150 YGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 150 ~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
.....|+.+|.+.+.+++.++.+. .++++..++|+.++.+
T Consensus 190 -~~~~~Y~~sK~a~~~l~~~la~~~~~~gIrv~~i~pG~v~T~ 231 (290)
T PRK06701 190 -ETLIDYSATKGAIHAFTRSLAQSLVQKGIRVNAVAPGPIWTP 231 (290)
T ss_pred -CCcchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCCCCc
Confidence 223469999999999999888774 2799999999988776
|
|
| >PRK07063 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=2.5e-19 Score=156.85 Aligned_cols=175 Identities=16% Similarity=0.085 Sum_probs=134.8
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
+++|+++||||+|+||+++++.|+++|++|++++|+.....+..+.+.... .+.++.++.+|++|++++.++++.
T Consensus 5 l~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~---~~~~~~~~~~Dl~~~~~~~~~~~~~~ 81 (260)
T PRK07063 5 LAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDV---AGARVLAVPADVTDAASVAAAVAAAE 81 (260)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcc---CCceEEEEEccCCCHHHHHHHHHHHH
Confidence 357899999999999999999999999999999997655544444443210 124688899999999999888774
Q ss_pred ---CCCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHHHH----cCCCEEEEeccccccCCCCCCCccCCC
Q 019795 80 ---QKFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAMAK----YNCKKLVFSSSATIYGQPEKIPCVEDF 148 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~v~~Ss~~vyg~~~~~~~~e~~ 148 (335)
..+|++||+||.... ..+.++++..+++|+.++.++++++.. .+.+++|++||...+.
T Consensus 82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~----------- 150 (260)
T PRK07063 82 EAFGPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGRGSIVNIASTHAFK----------- 150 (260)
T ss_pred HHhCCCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhCCeEEEEECChhhcc-----------
Confidence 379999999996421 223456778899999999999998653 3446899999976442
Q ss_pred CCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 149 PYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 149 ~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
+..+...|+.+|.+.+.+++.++.+. .++++.+++|+.+-.+
T Consensus 151 ~~~~~~~Y~~sKaa~~~~~~~la~el~~~gIrvn~v~PG~v~t~ 194 (260)
T PRK07063 151 IIPGCFPYPVAKHGLLGLTRALGIEYAARNVRVNAIAPGYIETQ 194 (260)
T ss_pred CCCCchHHHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccCh
Confidence 22334579999999999999988764 2789999999887543
|
|
| >PRK07102 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=4.6e-19 Score=153.57 Aligned_cols=172 Identities=16% Similarity=0.119 Sum_probs=131.3
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--CC
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS--QK 81 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~--~~ 81 (335)
||+++||||+|+||.++++.|+++|++|++++|++.......+.+..... .++.++.+|++|++++.++++. ..
T Consensus 1 ~~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~----~~~~~~~~Dl~~~~~~~~~~~~~~~~ 76 (243)
T PRK07102 1 MKKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGA----VAVSTHELDILDTASHAAFLDSLPAL 76 (243)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhcC----CeEEEEecCCCChHHHHHHHHHHhhc
Confidence 57999999999999999999999999999999976554443333332211 5788999999999999888774 25
Q ss_pred CCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHHHH----cCCCEEEEeccccccCCCCCCCccCCCCCCCC
Q 019795 82 FEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAMAK----YNCKKLVFSSSATIYGQPEKIPCVEDFPYGAM 153 (335)
Q Consensus 82 ~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~ 153 (335)
+|++||+++.... ..+.+++...+++|+.++.++++++.. .+.+++|++||..... +....
T Consensus 77 ~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~-----------~~~~~ 145 (243)
T PRK07102 77 PDIVLIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGISSVAGDR-----------GRASN 145 (243)
T ss_pred CCEEEECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEecccccC-----------CCCCC
Confidence 7999999986422 123344557899999999999998654 3567899999864321 12233
Q ss_pred ChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 154 NPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 154 ~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
..|+.+|...+.+++.++.+. .++++.+++|+.++++
T Consensus 146 ~~Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~v~t~ 184 (243)
T PRK07102 146 YVYGSAKAALTAFLSGLRNRLFKSGVHVLTVKPGFVRTP 184 (243)
T ss_pred cccHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccCh
Confidence 579999999999998876542 2899999999998876
|
|
| >PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=5.1e-19 Score=154.02 Aligned_cols=172 Identities=20% Similarity=0.184 Sum_probs=130.4
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
+++++++|||++|+||+++++.|+++|+.|++++|+..+.....+.+... +..+.++.+|+++.+++.++++.
T Consensus 3 ~~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~ 77 (253)
T PRK08217 3 LKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGAL-----GTEVRGYAANVTDEEDVEATFAQIA 77 (253)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-----CCceEEEEcCCCCHHHHHHHHHHHH
Confidence 45689999999999999999999999999999998765444443333321 25678899999999888877764
Q ss_pred ---CCCCEEEEcccccch-------------hhhhcChHHHHHHhHHHHHHHHHHHHH----c-CCCEEEEeccccccCC
Q 019795 80 ---QKFEAVIHFGALKAV-------------AESVQHPFRYFDNNLIGTINLYQAMAK----Y-NCKKLVFSSSATIYGQ 138 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~~-------------~~~~~~~~~~~~~nv~~~~~l~~~~~~----~-~~~~~v~~Ss~~vyg~ 138 (335)
..+|+|||+|+.... ..+.+.+..++++|+.++..+++.+.. . ....+|++||...||.
T Consensus 78 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ss~~~~~~ 157 (253)
T PRK08217 78 EDFGQLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSIARAGN 157 (253)
T ss_pred HHcCCCCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEccccccCC
Confidence 368999999986321 112345567889999999988776432 2 2247999999776642
Q ss_pred CCCCCccCCCCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 139 PEKIPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 139 ~~~~~~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
.+...|+.+|.+.+.+++.++.+. .++++++++|+.+.++
T Consensus 158 ------------~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~pg~v~t~ 199 (253)
T PRK08217 158 ------------MGQTNYSASKAGVAAMTVTWAKELARYGIRVAAIAPGVIETE 199 (253)
T ss_pred ------------CCCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCc
Confidence 234679999999999999887652 3899999999998776
|
|
| >PRK07454 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=2.5e-19 Score=155.00 Aligned_cols=173 Identities=13% Similarity=0.116 Sum_probs=132.4
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
.+||+++||||+|+||++++++|+++|++|++++|++.......+.+... ..++.++.+|++|.+++.++++.
T Consensus 4 ~~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~ 78 (241)
T PRK07454 4 NSMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRST-----GVKAAAYSIDLSNPEAIAPGIAELL 78 (241)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhC-----CCcEEEEEccCCCHHHHHHHHHHHH
Confidence 36789999999999999999999999999999999765433333333221 24688899999999988877764
Q ss_pred ---CCCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHHH----HcCCCEEEEeccccccCCCCCCCccCCC
Q 019795 80 ---QKFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAMA----KYNCKKLVFSSSATIYGQPEKIPCVEDF 148 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~v~~Ss~~vyg~~~~~~~~e~~ 148 (335)
.++|+|||+|+.... ..+.++++.++++|+.++.++++.+. +.+.+++|++||...++
T Consensus 79 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~----------- 147 (241)
T PRK07454 79 EQFGCPDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARGGGLIINVSSIAARN----------- 147 (241)
T ss_pred HHcCCCCEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCc-----------
Confidence 369999999997432 12334567789999999999888763 34457899999987763
Q ss_pred CCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 149 PYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 149 ~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
+..+...|+.+|...+.+++.++.+. .+++++++||+.+-.+
T Consensus 148 ~~~~~~~Y~~sK~~~~~~~~~~a~e~~~~gi~v~~i~pg~i~t~ 191 (241)
T PRK07454 148 AFPQWGAYCVSKAALAAFTKCLAEEERSHGIRVCTITLGAVNTP 191 (241)
T ss_pred CCCCccHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCcccCC
Confidence 22345679999999999988776542 2899999999987554
|
|
| >PRK08085 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=3.1e-19 Score=155.69 Aligned_cols=173 Identities=16% Similarity=0.109 Sum_probs=134.2
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
+.+|++|||||+|+||++++++|+++|++|++++|+..........+... ...+.++.+|++|.+++.++++.
T Consensus 7 l~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~-----~~~~~~~~~Dl~~~~~~~~~~~~~~ 81 (254)
T PRK08085 7 LAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQE-----GIKAHAAPFNVTHKQEVEAAIEHIE 81 (254)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhc-----CCeEEEEecCCCCHHHHHHHHHHHH
Confidence 35789999999999999999999999999999998765544444444321 14577889999999998887764
Q ss_pred ---CCCCEEEEcccccc----hhhhhcChHHHHHHhHHHHHHHHHHHHH----cCCCEEEEeccccccCCCCCCCccCCC
Q 019795 80 ---QKFEAVIHFGALKA----VAESVQHPFRYFDNNLIGTINLYQAMAK----YNCKKLVFSSSATIYGQPEKIPCVEDF 148 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~----~~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~v~~Ss~~vyg~~~~~~~~e~~ 148 (335)
..+|+|||+|+... ...+.++++.++++|+.++..+++++.. .+.++||++||.... .
T Consensus 82 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~-----------~ 150 (254)
T PRK08085 82 KDIGPIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIINICSMQSE-----------L 150 (254)
T ss_pred HhcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccchhc-----------c
Confidence 36899999998632 1223456778999999999999998654 345689999996432 1
Q ss_pred CCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 149 PYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 149 ~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
+..+...|+.+|...+.+++.++.+. .++++.+++|+.+..+
T Consensus 151 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pG~~~t~ 194 (254)
T PRK08085 151 GRDTITPYAASKGAVKMLTRGMCVELARHNIQVNGIAPGYFKTE 194 (254)
T ss_pred CCCCCcchHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCCCCCc
Confidence 22345689999999999999988764 2799999999988776
|
|
| >PRK07814 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=2.4e-19 Score=157.18 Aligned_cols=172 Identities=15% Similarity=0.133 Sum_probs=131.9
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc---
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS--- 79 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~--- 79 (335)
++|++|||||+|+||.++++.|+++|++|++++|+........+.+... +.++.++.+|+++++++.++++.
T Consensus 9 ~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~ 83 (263)
T PRK07814 9 DDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAA-----GRRAHVVAADLAHPEATAGLAGQAVE 83 (263)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-----CCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 5789999999999999999999999999999999755443333333221 14678899999999998877764
Q ss_pred --CCCCEEEEcccccc----hhhhhcChHHHHHHhHHHHHHHHHHHHH-----cCCCEEEEeccccccCCCCCCCccCCC
Q 019795 80 --QKFEAVIHFGALKA----VAESVQHPFRYFDNNLIGTINLYQAMAK-----YNCKKLVFSSSATIYGQPEKIPCVEDF 148 (335)
Q Consensus 80 --~~~d~vi~~a~~~~----~~~~~~~~~~~~~~nv~~~~~l~~~~~~-----~~~~~~v~~Ss~~vyg~~~~~~~~e~~ 148 (335)
.++|+|||+|+... ...+.++++..+++|+.++.++++++.. .+.+++|++||.....
T Consensus 84 ~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~~~~----------- 152 (263)
T PRK07814 84 AFGRLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISSTMGRL----------- 152 (263)
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEccccccC-----------
Confidence 37899999998632 2223456778999999999999999864 3456899999954321
Q ss_pred CCCCCChhHHhHHHHHHHHHHHHhhC-CCCeEEEEecccccCC
Q 019795 149 PYGAMNPYGRTKQWCEEIAFDVQKAD-PEWRIILLRYFNPVGA 190 (335)
Q Consensus 149 ~~~~~~~Y~~sK~~~E~~~~~~~~~~-~~~~~~~lR~~~v~G~ 190 (335)
+..+...|+.+|...+.+++.+..+. +.+.+..++|+.+..+
T Consensus 153 ~~~~~~~Y~~sK~a~~~~~~~~~~e~~~~i~v~~i~Pg~v~t~ 195 (263)
T PRK07814 153 AGRGFAAYGTAKAALAHYTRLAALDLCPRIRVNAIAPGSILTS 195 (263)
T ss_pred CCCCCchhHHHHHHHHHHHHHHHHHHCCCceEEEEEeCCCcCc
Confidence 23445689999999999999888764 3578888888876543
|
|
| >KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.5e-19 Score=155.44 Aligned_cols=172 Identities=20% Similarity=0.242 Sum_probs=133.3
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
+.+|+|+|||||.+||.+|+..|++.|.+++.+.|.....+...+++.+..+.+ ++.++++|++|++++.++++.
T Consensus 10 ~~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~---~v~~~~~Dvs~~~~~~~~~~~~~ 86 (282)
T KOG1205|consen 10 LAGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLE---KVLVLQLDVSDEESVKKFVEWAI 86 (282)
T ss_pred hCCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcC---ccEEEeCccCCHHHHHHHHHHHH
Confidence 467999999999999999999999999999998888888877767777766522 599999999999999988743
Q ss_pred ---CCCCEEEEcccccchh----hhhcChHHHHHHhHHHHHHHHHHHH----HcCCCEEEEeccccccCCCCCCCccCCC
Q 019795 80 ---QKFEAVIHFGALKAVA----ESVQHPFRYFDNNLIGTINLYQAMA----KYNCKKLVFSSSATIYGQPEKIPCVEDF 148 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~v~~Ss~~vyg~~~~~~~~e~~ 148 (335)
+++|++|||||..... .+.++...++++|+.|+..+.+++. +.+-++||.+||..-+ .
T Consensus 87 ~~fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~-----------~ 155 (282)
T KOG1205|consen 87 RHFGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGK-----------M 155 (282)
T ss_pred HhcCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccc-----------c
Confidence 5899999999985421 1233445689999999999999864 3344799999997654 1
Q ss_pred CCCCCChhHHhHHHHHHHHHHHHhhCCCCeE-E--EEecccc
Q 019795 149 PYGAMNPYGRTKQWCEEIAFDVQKADPEWRI-I--LLRYFNP 187 (335)
Q Consensus 149 ~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~-~--~lR~~~v 187 (335)
+.+....|..||.+.+.+...+..|...... + ++-||.|
T Consensus 156 ~~P~~~~Y~ASK~Al~~f~etLR~El~~~~~~i~i~V~PG~V 197 (282)
T KOG1205|consen 156 PLPFRSIYSASKHALEGFFETLRQELIPLGTIIIILVSPGPI 197 (282)
T ss_pred CCCcccccchHHHHHHHHHHHHHHHhhccCceEEEEEecCce
Confidence 3333348999999999999988888533221 1 3556554
|
|
| >PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=3e-19 Score=154.30 Aligned_cols=171 Identities=15% Similarity=0.167 Sum_probs=131.8
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc----
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS---- 79 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~---- 79 (335)
+++++||||+|+||++++++|+++|++|++++|+........+.+... +.++.++.+|+++.+++.++++.
T Consensus 7 ~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~ 81 (239)
T PRK07666 7 GKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAY-----GVKVVIATADVSDYEEVTAAIEQLKNE 81 (239)
T ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHh-----CCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 578999999999999999999999999999999765444333333221 24688899999999999888874
Q ss_pred -CCCCEEEEcccccchh----hhhcChHHHHHHhHHHHHHHHHHHHH----cCCCEEEEeccccccCCCCCCCccCCCCC
Q 019795 80 -QKFEAVIHFGALKAVA----ESVQHPFRYFDNNLIGTINLYQAMAK----YNCKKLVFSSSATIYGQPEKIPCVEDFPY 150 (335)
Q Consensus 80 -~~~d~vi~~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~ 150 (335)
.++|+|||+|+..... .+.+++++.+++|+.++.++++++.. .+.+++|++||...+. +.
T Consensus 82 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~-----------~~ 150 (239)
T PRK07666 82 LGSIDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSGDIINISSTAGQK-----------GA 150 (239)
T ss_pred cCCccEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEEcchhhcc-----------CC
Confidence 3799999999874321 23345567899999999999988753 4457899999966442 22
Q ss_pred CCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 151 GAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 151 ~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
.+...|+.+|.+.+.+++.++.+. .+++++++||+.+..+
T Consensus 151 ~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~ 192 (239)
T PRK07666 151 AVTSAYSASKFGVLGLTESLMQEVRKHNIRVTALTPSTVATD 192 (239)
T ss_pred CCCcchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccCc
Confidence 344579999999999988776552 2899999999988765
|
|
| >PRK08267 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=2.9e-19 Score=156.43 Aligned_cols=168 Identities=20% Similarity=0.181 Sum_probs=128.8
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc----
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS---- 79 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~---- 79 (335)
||++|||||||+||++++++|+++|++|++++|+..........+. ...+.++.+|++|.+++.++++.
T Consensus 1 mk~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~-------~~~~~~~~~D~~~~~~v~~~~~~~~~~ 73 (260)
T PRK08267 1 MKSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELG-------AGNAWTGALDVTDRAAWDAALADFAAA 73 (260)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhc-------CCceEEEEecCCCHHHHHHHHHHHHHH
Confidence 5899999999999999999999999999999987554333322221 14688999999999988887762
Q ss_pred --CCCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHHHH----cCCCEEEEecccc-ccCCCCCCCccCCC
Q 019795 80 --QKFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAMAK----YNCKKLVFSSSAT-IYGQPEKIPCVEDF 148 (335)
Q Consensus 80 --~~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~v~~Ss~~-vyg~~~~~~~~e~~ 148 (335)
.++|+|||+||.... ..+.++++..+++|+.++.++++++.. .+.+++|++||.. .+|.
T Consensus 74 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~---------- 143 (260)
T PRK08267 74 TGGRLDVLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPGARVINTSSASAIYGQ---------- 143 (260)
T ss_pred cCCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEeCchhhCcCC----------
Confidence 368999999997432 223455678899999999999988643 3457899999954 3432
Q ss_pred CCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 149 PYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 149 ~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
.....|+.+|...+.+++.++.+. .++++.+++|+.+-..
T Consensus 144 --~~~~~Y~~sKaa~~~~~~~l~~~~~~~~i~v~~i~pg~~~t~ 185 (260)
T PRK08267 144 --PGLAVYSATKFAVRGLTEALDLEWRRHGIRVADVMPLFVDTA 185 (260)
T ss_pred --CCchhhHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCcCCc
Confidence 224579999999999998887653 2799999999877543
|
|
| >PRK07478 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=2.6e-19 Score=156.16 Aligned_cols=173 Identities=15% Similarity=0.093 Sum_probs=133.2
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc---
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS--- 79 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~--- 79 (335)
++|+++||||+|+||.++++.|++.|++|++++|++.+.....+++... ..++.++.+|++|++++.+++++
T Consensus 5 ~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~ 79 (254)
T PRK07478 5 NGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAE-----GGEAVALAGDVRDEAYAKALVALAVE 79 (254)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-----CCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 4589999999999999999999999999999999866555444444332 14678899999999988887774
Q ss_pred --CCCCEEEEcccccc-----hhhhhcChHHHHHHhHHHHHHHHHHHH----HcCCCEEEEeccccccCCCCCCCccCCC
Q 019795 80 --QKFEAVIHFGALKA-----VAESVQHPFRYFDNNLIGTINLYQAMA----KYNCKKLVFSSSATIYGQPEKIPCVEDF 148 (335)
Q Consensus 80 --~~~d~vi~~a~~~~-----~~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~v~~Ss~~vyg~~~~~~~~e~~ 148 (335)
.++|++||+|+... ...+.++++..+++|+.++..+++++. +.+.+++|++||...+..
T Consensus 80 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~~~iv~~sS~~~~~~---------- 149 (254)
T PRK07478 80 RFGGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARGGGSLIFTSTFVGHTA---------- 149 (254)
T ss_pred hcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEechHhhcc----------
Confidence 37999999999632 122345567889999999988877643 444568999999765421
Q ss_pred CCCCCChhHHhHHHHHHHHHHHHhhCC--CCeEEEEecccccCC
Q 019795 149 PYGAMNPYGRTKQWCEEIAFDVQKADP--EWRIILLRYFNPVGA 190 (335)
Q Consensus 149 ~~~~~~~Y~~sK~~~E~~~~~~~~~~~--~~~~~~lR~~~v~G~ 190 (335)
+..+...|+.||.+.+.+++.++.+.. ++.+.+++|+.+-.+
T Consensus 150 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~ 193 (254)
T PRK07478 150 GFPGMAAYAASKAGLIGLTQVLAAEYGAQGIRVNALLPGGTDTP 193 (254)
T ss_pred CCCCcchhHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCcccCc
Confidence 223456899999999999998887742 689999999887544
|
|
| >PRK10538 malonic semialdehyde reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=2.8e-19 Score=155.45 Aligned_cols=167 Identities=20% Similarity=0.286 Sum_probs=128.6
Q ss_pred CeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc-----
Q 019795 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS----- 79 (335)
Q Consensus 5 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~----- 79 (335)
|+++||||||+||+++++.|+++|++|++++|++......... . +.++.++.+|++|.+++.++++.
T Consensus 1 ~~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~----~----~~~~~~~~~Dl~~~~~i~~~~~~~~~~~ 72 (248)
T PRK10538 1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDE----L----GDNLYIAQLDVRNRAAIEEMLASLPAEW 72 (248)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH----h----ccceEEEEecCCCHHHHHHHHHHHHHHc
Confidence 5899999999999999999999999999999975433222211 1 14678899999999988887764
Q ss_pred CCCCEEEEcccccc-----hhhhhcChHHHHHHhHHHHHHHHHHHH----HcCCCEEEEeccccccCCCCCCCccCCCCC
Q 019795 80 QKFEAVIHFGALKA-----VAESVQHPFRYFDNNLIGTINLYQAMA----KYNCKKLVFSSSATIYGQPEKIPCVEDFPY 150 (335)
Q Consensus 80 ~~~d~vi~~a~~~~-----~~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~ 150 (335)
.++|+|||+||... ...+.+.++.++++|+.++..+++.+. +.+.+++|++||...+ .+.
T Consensus 73 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~-----------~~~ 141 (248)
T PRK10538 73 RNIDVLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGS-----------WPY 141 (248)
T ss_pred CCCCEEEECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCcccC-----------CCC
Confidence 37999999998632 122345667889999999888777754 4456799999996543 123
Q ss_pred CCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 151 GAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 151 ~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
.+...|+.+|...+.+++.++.+. .++.+.+++|+.+.|+
T Consensus 142 ~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~i~~~ 183 (248)
T PRK10538 142 AGGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGT 183 (248)
T ss_pred CCCchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCeeccc
Confidence 445689999999999999887764 3789999999988765
|
|
| >PRK08264 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.83 E-value=7e-19 Score=151.90 Aligned_cols=166 Identities=15% Similarity=0.103 Sum_probs=131.3
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcC-
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGF-KVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQ- 80 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~- 80 (335)
++++++||||+|+||+++++.|+++|+ +|++++|+...... . ...+.++.+|+.|.+++.++++..
T Consensus 5 ~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~--------~----~~~~~~~~~D~~~~~~~~~~~~~~~ 72 (238)
T PRK08264 5 KGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD--------L----GPRVVPLQLDVTDPASVAAAAEAAS 72 (238)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh--------c----CCceEEEEecCCCHHHHHHHHHhcC
Confidence 457999999999999999999999999 99999987543221 1 156889999999999999988753
Q ss_pred CCCEEEEcccccc-----hhhhhcChHHHHHHhHHHHHHHHHHHHH----cCCCEEEEeccccccCCCCCCCccCCCCCC
Q 019795 81 KFEAVIHFGALKA-----VAESVQHPFRYFDNNLIGTINLYQAMAK----YNCKKLVFSSSATIYGQPEKIPCVEDFPYG 151 (335)
Q Consensus 81 ~~d~vi~~a~~~~-----~~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~ 151 (335)
.+|+|||+|+... ...+.+.+...+++|+.++.++++++.. .+.+++|++||...+. +..
T Consensus 73 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~-----------~~~ 141 (238)
T PRK08264 73 DVTILVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGGAIVNVLSVLSWV-----------NFP 141 (238)
T ss_pred CCCEEEECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhcc-----------CCC
Confidence 5899999999721 1223456668899999999999998653 4557899999976653 233
Q ss_pred CCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCCC
Q 019795 152 AMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGAH 191 (335)
Q Consensus 152 ~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~~ 191 (335)
+...|+.+|...|.+++.++.+. .+++++++||+.+.++-
T Consensus 142 ~~~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~v~pg~v~t~~ 183 (238)
T PRK08264 142 NLGTYSASKAAAWSLTQALRAELAPQGTRVLGVHPGPIDTDM 183 (238)
T ss_pred CchHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeCCcccccc
Confidence 45689999999999998877663 27899999999987763
|
|
| >PRK08339 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=3.2e-19 Score=156.42 Aligned_cols=174 Identities=15% Similarity=0.116 Sum_probs=133.7
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
+++|++|||||+|+||++++++|+++|++|++++|+..+.....+.+.... +.++.++.+|++|++++.++++.
T Consensus 6 l~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~i~~~~~~~~ 81 (263)
T PRK08339 6 LSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSES----NVDVSYIVADLTKREDLERTVKELK 81 (263)
T ss_pred CCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhc----CCceEEEEecCCCHHHHHHHHHHHH
Confidence 346899999999999999999999999999999997655444444443221 14688999999999999888774
Q ss_pred --CCCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHHH----HcCCCEEEEeccccccCCCCCCCccCCCC
Q 019795 80 --QKFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAMA----KYNCKKLVFSSSATIYGQPEKIPCVEDFP 149 (335)
Q Consensus 80 --~~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~ 149 (335)
.++|++||+||.... ..+.++++..+++|+.++..+++++. +.+.+++|++||...+. +
T Consensus 82 ~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~isS~~~~~-----------~ 150 (263)
T PRK08339 82 NIGEPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYSTSVAIKE-----------P 150 (263)
T ss_pred hhCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCccccC-----------C
Confidence 469999999986422 23456777899999999888877754 34457999999976541 2
Q ss_pred CCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 150 YGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 150 ~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
......|+.+|...+.+++.++.+. .++++.++.|+.+-.+
T Consensus 151 ~~~~~~y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~ 193 (263)
T PRK08339 151 IPNIALSNVVRISMAGLVRTLAKELGPKGITVNGIMPGIIRTD 193 (263)
T ss_pred CCcchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccH
Confidence 2234579999999999999888774 2789999999887543
|
|
| >PRK05866 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=4.1e-19 Score=158.00 Aligned_cols=173 Identities=16% Similarity=0.142 Sum_probs=130.8
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
+.+|+++||||+|+||+++++.|+++|++|++++|+........+.+... ...+.++.+|++|++++.++++.
T Consensus 38 ~~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~-----~~~~~~~~~Dl~d~~~v~~~~~~~~ 112 (293)
T PRK05866 38 LTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRA-----GGDAMAVPCDLSDLDAVDALVADVE 112 (293)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc-----CCcEEEEEccCCCHHHHHHHHHHHH
Confidence 45689999999999999999999999999999999765444433333221 14577899999999998888873
Q ss_pred ---CCCCEEEEcccccchhh------hhcChHHHHHHhHHHHHHHHHHHH----HcCCCEEEEeccccccCCCCCCCccC
Q 019795 80 ---QKFEAVIHFGALKAVAE------SVQHPFRYFDNNLIGTINLYQAMA----KYNCKKLVFSSSATIYGQPEKIPCVE 146 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~~~~------~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~v~~Ss~~vyg~~~~~~~~e 146 (335)
..+|+|||+||...... ..++.+..+++|+.++.++++++. +.+.+++|++||.+.++.
T Consensus 113 ~~~g~id~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~-------- 184 (293)
T PRK05866 113 KRIGGVDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERGDGHIINVATWGVLSE-------- 184 (293)
T ss_pred HHcCCCCEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCC--------
Confidence 37899999999743211 123445789999999999888754 455679999999765531
Q ss_pred CCCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccC
Q 019795 147 DFPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVG 189 (335)
Q Consensus 147 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G 189 (335)
+......|+.+|+..+.+++.++.+. .++.+++++|+.+-.
T Consensus 185 --~~p~~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~pg~v~T 227 (293)
T PRK05866 185 --ASPLFSVYNASKAALSAVSRVIETEWGDRGVHSTTLYYPLVAT 227 (293)
T ss_pred --CCCCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEEcCcccC
Confidence 11234579999999999998887664 278999999986533
|
|
| >PRK09291 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=3.7e-19 Score=155.38 Aligned_cols=167 Identities=19% Similarity=0.160 Sum_probs=124.8
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCCC
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKFE 83 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~d 83 (335)
+|++|||||||+||+++++.|+++|++|++++|+........+..... ..++.++.+|++|++++.+++. .++|
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~-~~id 75 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARR-----GLALRVEKLDLTDAIDRAQAAE-WDVD 75 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-----CCcceEEEeeCCCHHHHHHHhc-CCCC
Confidence 679999999999999999999999999999998754332222221111 1458899999999999988876 3799
Q ss_pred EEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHH----HHcCCCEEEEeccccccCCCCCCCccCCCCCCCCCh
Q 019795 84 AVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAM----AKYNCKKLVFSSSATIYGQPEKIPCVEDFPYGAMNP 155 (335)
Q Consensus 84 ~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~ 155 (335)
+|||+|+.... ..+.+.++..+++|+.++.++.+.+ ++.+.+++|++||...+. .......
T Consensus 76 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~SS~~~~~-----------~~~~~~~ 144 (257)
T PRK09291 76 VLLNNAGIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARGKGKVVFTSSMAGLI-----------TGPFTGA 144 (257)
T ss_pred EEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEcChhhcc-----------CCCCcch
Confidence 99999997432 1233455678899999988777654 445567999999965431 1123457
Q ss_pred hHHhHHHHHHHHHHHHhhC--CCCeEEEEecccc
Q 019795 156 YGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNP 187 (335)
Q Consensus 156 Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v 187 (335)
|+.+|...|.+++.+..+. .+++++++||+.+
T Consensus 145 Y~~sK~a~~~~~~~l~~~~~~~gi~~~~v~pg~~ 178 (257)
T PRK09291 145 YCASKHALEAIAEAMHAELKPFGIQVATVNPGPY 178 (257)
T ss_pred hHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcc
Confidence 9999999999888766541 3899999999765
|
|
| >PRK06172 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=3.7e-19 Score=155.11 Aligned_cols=172 Identities=19% Similarity=0.137 Sum_probs=133.3
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc---
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS--- 79 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~--- 79 (335)
++|+++||||+|+||++++++|+++|++|++++|++.......+.+.+. +.++.++.+|++|.+++.++++.
T Consensus 6 ~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~~ 80 (253)
T PRK06172 6 SGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREA-----GGEALFVACDVTRDAEVKALVEQTIA 80 (253)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc-----CCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 4589999999999999999999999999999999765544444444322 24688999999999988887764
Q ss_pred --CCCCEEEEcccccc-----hhhhhcChHHHHHHhHHHHHHHHHHHH----HcCCCEEEEeccccccCCCCCCCccCCC
Q 019795 80 --QKFEAVIHFGALKA-----VAESVQHPFRYFDNNLIGTINLYQAMA----KYNCKKLVFSSSATIYGQPEKIPCVEDF 148 (335)
Q Consensus 80 --~~~d~vi~~a~~~~-----~~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~v~~Ss~~vyg~~~~~~~~e~~ 148 (335)
.++|+|||+|+... ...+.++++..+++|+.++..+++++. +.+.+++|++||...+.
T Consensus 81 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~sS~~~~~----------- 149 (253)
T PRK06172 81 AYGRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQGGGAIVNTASVAGLG----------- 149 (253)
T ss_pred HhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECchhhcc-----------
Confidence 37899999999632 222445677889999999988877643 34456899999977653
Q ss_pred CCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 149 PYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 149 ~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
+......|+.+|...+.+++.++.++ .++++.++.|+.|-.+
T Consensus 150 ~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~i~PG~v~t~ 193 (253)
T PRK06172 150 AAPKMSIYAASKHAVIGLTKSAAIEYAKKGIRVNAVCPAVIDTD 193 (253)
T ss_pred CCCCCchhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccCh
Confidence 22345679999999999999988775 2689999999877444
|
|
| >PRK08589 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.83 E-value=4.6e-19 Score=156.23 Aligned_cols=171 Identities=16% Similarity=0.126 Sum_probs=131.6
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
+++|++|||||+|+||+++++.|+++|++|++++|+ ........++.+. ..++.++.+|+++++++.++++.
T Consensus 4 l~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~-----~~~~~~~~~Dl~~~~~~~~~~~~~~ 77 (272)
T PRK08589 4 LENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSN-----GGKAKAYHVDISDEQQVKDFASEIK 77 (272)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhc-----CCeEEEEEeecCCHHHHHHHHHHHH
Confidence 467999999999999999999999999999999987 4444334444321 14688899999999988887764
Q ss_pred ---CCCCEEEEcccccch-----hhhhcChHHHHHHhHHHHHHHHHHHHH----cCCCEEEEeccccccCCCCCCCccCC
Q 019795 80 ---QKFEAVIHFGALKAV-----AESVQHPFRYFDNNLIGTINLYQAMAK----YNCKKLVFSSSATIYGQPEKIPCVED 147 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~~-----~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~v~~Ss~~vyg~~~~~~~~e~ 147 (335)
..+|++||+||.... ..+.+.++..+++|+.++..+++++.. .+ +++|++||...+.
T Consensus 78 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~---------- 146 (272)
T PRK08589 78 EQFGRVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQG-GSIINTSSFSGQA---------- 146 (272)
T ss_pred HHcCCcCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEeCchhhcC----------
Confidence 368999999987421 113345667889999999988887543 33 6899999976542
Q ss_pred CCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 148 FPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 148 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
+......|+.+|...+.+++.++.+. .++++.++.|+.|..+
T Consensus 147 -~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~ 190 (272)
T PRK08589 147 -ADLYRSGYNAAKGAVINFTKSIAIEYGRDGIRANAIAPGTIETP 190 (272)
T ss_pred -CCCCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCc
Confidence 22234579999999999999988764 2799999999988654
|
|
| >PRK08265 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=3.7e-19 Score=155.85 Aligned_cols=170 Identities=16% Similarity=0.160 Sum_probs=130.9
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
+++|+++||||+|+||+++++.|+++|++|++++|+........+.+ ..++.++.+|++|++++.++++.
T Consensus 4 ~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~--------~~~~~~~~~Dl~~~~~~~~~~~~~~ 75 (261)
T PRK08265 4 LAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASL--------GERARFIATDITDDAAIERAVATVV 75 (261)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh--------CCeeEEEEecCCCHHHHHHHHHHHH
Confidence 56799999999999999999999999999999999754433332221 14678899999999999888774
Q ss_pred ---CCCCEEEEcccccc---hhhhhcChHHHHHHhHHHHHHHHHHHHH---cCCCEEEEeccccccCCCCCCCccCCCCC
Q 019795 80 ---QKFEAVIHFGALKA---VAESVQHPFRYFDNNLIGTINLYQAMAK---YNCKKLVFSSSATIYGQPEKIPCVEDFPY 150 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~---~~~~~~~~~~~~~~nv~~~~~l~~~~~~---~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~ 150 (335)
..+|++||+|+... ...+.+.++..+++|+.++..+++++.. .+.+++|++||..... +.
T Consensus 76 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~-----------~~ 144 (261)
T PRK08265 76 ARFGRVDILVNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLARGGGAIVNFTSISAKF-----------AQ 144 (261)
T ss_pred HHhCCCCEEEECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCCcEEEEECchhhcc-----------CC
Confidence 37899999998632 1234456778899999999999998654 2336899999965431 22
Q ss_pred CCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 151 GAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 151 ~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
.....|+.+|...+.+++.++.+. .++++.+++|+.+..+
T Consensus 145 ~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~~~t~ 186 (261)
T PRK08265 145 TGRWLYPASKAAIRQLTRSMAMDLAPDGIRVNSVSPGWTWSR 186 (261)
T ss_pred CCCchhHHHHHHHHHHHHHHHHHhcccCEEEEEEccCCccCh
Confidence 234579999999999999887664 2789999999877554
|
|
| >PRK06523 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=4.2e-19 Score=155.38 Aligned_cols=164 Identities=17% Similarity=0.130 Sum_probs=127.8
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc---
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS--- 79 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~--- 79 (335)
++|+||||||+|+||++++++|+++|++|++++|+..... ...+.++.+|++|++++.++++.
T Consensus 8 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~~--------------~~~~~~~~~D~~~~~~~~~~~~~~~~ 73 (260)
T PRK06523 8 AGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDDL--------------PEGVEFVAADLTTAEGCAAVARAVLE 73 (260)
T ss_pred CCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhhc--------------CCceeEEecCCCCHHHHHHHHHHHHH
Confidence 4689999999999999999999999999999998654210 14578899999999988876653
Q ss_pred --CCCCEEEEcccccch------hhhhcChHHHHHHhHHHHHHHHHHHH----HcCCCEEEEeccccccCCCCCCCccCC
Q 019795 80 --QKFEAVIHFGALKAV------AESVQHPFRYFDNNLIGTINLYQAMA----KYNCKKLVFSSSATIYGQPEKIPCVED 147 (335)
Q Consensus 80 --~~~d~vi~~a~~~~~------~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~v~~Ss~~vyg~~~~~~~~e~ 147 (335)
..+|+|||+||.... ..+.++++..+++|+.++.++++++. +.+.+++|++||...+..
T Consensus 74 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~--------- 144 (260)
T PRK06523 74 RLGGVDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARGSGVIIHVTSIQRRLP--------- 144 (260)
T ss_pred HcCCCCEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEecccccCC---------
Confidence 378999999985321 12345677889999999988877653 344568999999765421
Q ss_pred CCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 148 FPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 148 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
...+...|+.+|...+.+++.++.++ .++.+.+++|+.+..+
T Consensus 145 -~~~~~~~Y~~sK~a~~~l~~~~a~~~~~~gi~v~~i~Pg~v~t~ 188 (260)
T PRK06523 145 -LPESTTAYAAAKAALSTYSKSLSKEVAPKGVRVNTVSPGWIETE 188 (260)
T ss_pred -CCCCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCc
Confidence 12245689999999999999887664 2799999999999876
|
|
| >PRK07326 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=3.5e-19 Score=153.65 Aligned_cols=171 Identities=17% Similarity=0.124 Sum_probs=130.3
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc---
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS--- 79 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~--- 79 (335)
++++++||||+|+||++++++|++.|++|++++|++.+.....+.+.+. ..+.++.+|++|.+++.++++.
T Consensus 5 ~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~------~~~~~~~~D~~~~~~~~~~~~~~~~ 78 (237)
T PRK07326 5 KGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNK------GNVLGLAADVRDEADVQRAVDAIVA 78 (237)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhcc------CcEEEEEccCCCHHHHHHHHHHHHH
Confidence 3479999999999999999999999999999999765443333333211 4578899999999998887774
Q ss_pred --CCCCEEEEcccccchh----hhhcChHHHHHHhHHHHHHHHHHHHHc---CCCEEEEeccccccCCCCCCCccCCCCC
Q 019795 80 --QKFEAVIHFGALKAVA----ESVQHPFRYFDNNLIGTINLYQAMAKY---NCKKLVFSSSATIYGQPEKIPCVEDFPY 150 (335)
Q Consensus 80 --~~~d~vi~~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~~v~~Ss~~vyg~~~~~~~~e~~~~ 150 (335)
.++|+|||+++..... .+.+.++..+++|+.++..+++++.+. +.+++|++||...+. +.
T Consensus 79 ~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~-----------~~ 147 (237)
T PRK07326 79 AFGGLDVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRGGGYIINISSLAGTN-----------FF 147 (237)
T ss_pred HcCCCCEEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHHCCeEEEEECChhhcc-----------CC
Confidence 3799999999874321 233455678999999999999987642 446899999965432 23
Q ss_pred CCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 151 GAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 151 ~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
.+...|+.+|...+.+++.++.+. .+++++++||+.+..+
T Consensus 148 ~~~~~y~~sk~a~~~~~~~~~~~~~~~gi~v~~v~pg~~~t~ 189 (237)
T PRK07326 148 AGGAAYNASKFGLVGFSEAAMLDLRQYGIKVSTIMPGSVATH 189 (237)
T ss_pred CCCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeccccCc
Confidence 345679999999998888776442 3899999999887654
|
|
| >TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase | Back alignment and domain information |
|---|
Probab=99.83 E-value=6.4e-19 Score=153.10 Aligned_cols=171 Identities=17% Similarity=0.110 Sum_probs=132.6
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
+++|+++||||+|+||++++++|+++|++|++++|+.. ....+.+... +..+.++.+|+++.+++.++++.
T Consensus 3 ~~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~--~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~ 75 (248)
T TIGR01832 3 LEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEP--SETQQQVEAL-----GRRFLSLTADLSDIEAIKALVDSAV 75 (248)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchH--HHHHHHHHhc-----CCceEEEECCCCCHHHHHHHHHHHH
Confidence 56899999999999999999999999999999998542 2223333221 14688999999999999877764
Q ss_pred ---CCCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHHHH----cC-CCEEEEeccccccCCCCCCCccCC
Q 019795 80 ---QKFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAMAK----YN-CKKLVFSSSATIYGQPEKIPCVED 147 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~-~~~~v~~Ss~~vyg~~~~~~~~e~ 147 (335)
.++|++||+|+.... ..+.+.++..+++|+.++.++++++.. .+ .+++|++||...+...
T Consensus 76 ~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~-------- 147 (248)
T TIGR01832 76 EEFGHIDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSFQGG-------- 147 (248)
T ss_pred HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhccCC--------
Confidence 369999999997432 123345668899999999999998753 22 3689999998766321
Q ss_pred CCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 148 FPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 148 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
.....|+.+|.+.+.+++.++.+. .++++.+++|+.+..+
T Consensus 148 ---~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~ 189 (248)
T TIGR01832 148 ---IRVPSYTASKHGVAGLTKLLANEWAAKGINVNAIAPGYMATN 189 (248)
T ss_pred ---CCCchhHHHHHHHHHHHHHHHHHhCccCcEEEEEEECcCcCc
Confidence 223479999999999999988874 2799999999988665
|
This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation. |
| >PRK06181 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=4.8e-19 Score=155.28 Aligned_cols=171 Identities=13% Similarity=0.114 Sum_probs=131.2
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc----
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS---- 79 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~---- 79 (335)
|++||||||+|+||+++++.|+++|++|++++|+........+.+... +..+.++.+|++|++++.++++.
T Consensus 1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~-----~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 75 (263)
T PRK06181 1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADH-----GGEALVVPTDVSDAEACERLIEAAVAR 75 (263)
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-----CCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 578999999999999999999999999999998755443333333221 24688899999999998888774
Q ss_pred -CCCCEEEEcccccchhh-----hhcChHHHHHHhHHHHHHHHHHHHH---cCCCEEEEeccccccCCCCCCCccCCCCC
Q 019795 80 -QKFEAVIHFGALKAVAE-----SVQHPFRYFDNNLIGTINLYQAMAK---YNCKKLVFSSSATIYGQPEKIPCVEDFPY 150 (335)
Q Consensus 80 -~~~d~vi~~a~~~~~~~-----~~~~~~~~~~~nv~~~~~l~~~~~~---~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~ 150 (335)
.++|+|||+|+...... +.+.+...+++|+.++.++++.+.. .+.+++|++||...+. +.
T Consensus 76 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~iv~~sS~~~~~-----------~~ 144 (263)
T PRK06181 76 FGGIDILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKASRGQIVVVSSLAGLT-----------GV 144 (263)
T ss_pred cCCCCEEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCEEEEEecccccC-----------CC
Confidence 37899999998743221 2333567799999999999999753 2346899999977653 23
Q ss_pred CCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 151 GAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 151 ~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
.+...|+.+|...|.+++.++.+. .++++.+++|+.+..+
T Consensus 145 ~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~ 186 (263)
T PRK06181 145 PTRSGYAASKHALHGFFDSLRIELADDGVAVTVVCPGFVATD 186 (263)
T ss_pred CCccHHHHHHHHHHHHHHHHHHHhhhcCceEEEEecCccccC
Confidence 345689999999999988776542 2789999999888665
|
|
| >PRK05693 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=3.4e-19 Score=157.20 Aligned_cols=165 Identities=14% Similarity=0.091 Sum_probs=126.3
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc----
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS---- 79 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~---- 79 (335)
||++|||||+|+||+++++.|+++|++|++++|+..... .+.. .++.++.+|++|.+++.++++.
T Consensus 1 mk~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~----~~~~-------~~~~~~~~Dl~~~~~~~~~~~~~~~~ 69 (274)
T PRK05693 1 MPVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVE----ALAA-------AGFTAVQLDVNDGAALARLAEELEAE 69 (274)
T ss_pred CCEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHH----HHHH-------CCCeEEEeeCCCHHHHHHHHHHHHHh
Confidence 579999999999999999999999999999998643322 1111 3467889999999998887764
Q ss_pred -CCCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHHHH---cCCCEEEEeccccccCCCCCCCccCCCCCC
Q 019795 80 -QKFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAMAK---YNCKKLVFSSSATIYGQPEKIPCVEDFPYG 151 (335)
Q Consensus 80 -~~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~---~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~ 151 (335)
.++|+|||+||.... ..+.++++..+++|+.++.++++++.. .+.+++|++||...+. +..
T Consensus 70 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~ 138 (274)
T PRK05693 70 HGGLDVLINNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRSRGLVVNIGSVSGVL-----------VTP 138 (274)
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCEEEEECCccccC-----------CCC
Confidence 378999999996422 123456678899999999999998643 2346899999855431 122
Q ss_pred CCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 152 AMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 152 ~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
....|+.+|...+.+++.++.+. .++.+++++|+.|..+
T Consensus 139 ~~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~pg~v~t~ 179 (274)
T PRK05693 139 FAGAYCASKAAVHALSDALRLELAPFGVQVMEVQPGAIASQ 179 (274)
T ss_pred CccHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCccccc
Confidence 34579999999999988777652 2899999999988654
|
|
| >PRK08277 D-mannonate oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=5.9e-19 Score=156.04 Aligned_cols=172 Identities=19% Similarity=0.166 Sum_probs=132.9
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc---
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS--- 79 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~--- 79 (335)
++|+++||||+|+||++++++|+++|++|++++|+........+.+... ..++.++.+|++|++++.++++.
T Consensus 9 ~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~Dl~~~~~v~~~~~~~~~ 83 (278)
T PRK08277 9 KGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAA-----GGEALAVKADVLDKESLEQARQQILE 83 (278)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-----CCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 4689999999999999999999999999999999754444333333221 14678899999999988887764
Q ss_pred --CCCCEEEEcccccch-------------------hhhhcChHHHHHHhHHHHHHHHHHHH----HcCCCEEEEecccc
Q 019795 80 --QKFEAVIHFGALKAV-------------------AESVQHPFRYFDNNLIGTINLYQAMA----KYNCKKLVFSSSAT 134 (335)
Q Consensus 80 --~~~d~vi~~a~~~~~-------------------~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~v~~Ss~~ 134 (335)
.++|++||+|+.... ..+.++++..+++|+.++..+++++. +.+.+++|++||..
T Consensus 84 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~ 163 (278)
T PRK08277 84 DFGPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRKGGNIINISSMN 163 (278)
T ss_pred HcCCCCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccch
Confidence 379999999995321 11234567889999999988777643 34456899999987
Q ss_pred ccCCCCCCCccCCCCCCCCChhHHhHHHHHHHHHHHHhhCC--CCeEEEEecccccCC
Q 019795 135 IYGQPEKIPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKADP--EWRIILLRYFNPVGA 190 (335)
Q Consensus 135 vyg~~~~~~~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~--~~~~~~lR~~~v~G~ 190 (335)
.+. +..+...|+.+|...+.+++.++.++. ++++.+++|+.+..+
T Consensus 164 ~~~-----------~~~~~~~Y~~sK~a~~~l~~~la~e~~~~girvn~v~Pg~v~t~ 210 (278)
T PRK08277 164 AFT-----------PLTKVPAYSAAKAAISNFTQWLAVHFAKVGIRVNAIAPGFFLTE 210 (278)
T ss_pred hcC-----------CCCCCchhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeccCcCc
Confidence 663 233456799999999999998887752 789999999998776
|
|
| >PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=5.6e-19 Score=153.86 Aligned_cols=172 Identities=15% Similarity=0.148 Sum_probs=128.3
Q ss_pred CCCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc-
Q 019795 1 MASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS- 79 (335)
Q Consensus 1 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~- 79 (335)
|+++|+++||||+|+||+++++.|+++|++|+++.++... ..+.+.... +.++.++.+|++|++++.++++.
T Consensus 2 ~l~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~---~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~ 74 (253)
T PRK08642 2 QISEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSED---AAEALADEL----GDRAIALQADVTDREQVQAMFATA 74 (253)
T ss_pred CCCCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHH---HHHHHHHHh----CCceEEEEcCCCCHHHHHHHHHHH
Confidence 4566899999999999999999999999999887653321 112222111 14678899999999998888774
Q ss_pred ----CC-CCEEEEcccccc----------hhhhhcChHHHHHHhHHHHHHHHHHHHH----cCCCEEEEeccccccCCCC
Q 019795 80 ----QK-FEAVIHFGALKA----------VAESVQHPFRYFDNNLIGTINLYQAMAK----YNCKKLVFSSSATIYGQPE 140 (335)
Q Consensus 80 ----~~-~d~vi~~a~~~~----------~~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~v~~Ss~~vyg~~~ 140 (335)
.. +|++||+|+... ...+.+.++..+++|+.++.++++++.. .+.+++|++||....
T Consensus 75 ~~~~g~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~---- 150 (253)
T PRK08642 75 TEHFGKPITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQGFGRIINIGTNLFQ---- 150 (253)
T ss_pred HHHhCCCCeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcCCeEEEEECCcccc----
Confidence 23 999999998521 1123345667899999999999999753 345689999985432
Q ss_pred CCCccCCCCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 141 KIPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 141 ~~~~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
.+..+...|+.+|.+.|.+++.++.++ .++.+.+++|+.+-.+
T Consensus 151 -------~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~i~pG~v~t~ 195 (253)
T PRK08642 151 -------NPVVPYHDYTTAKAALLGLTRNLAAELGPYGITVNMVSGGLLRTT 195 (253)
T ss_pred -------CCCCCccchHHHHHHHHHHHHHHHHHhCccCeEEEEEeecccCCc
Confidence 134456689999999999999988774 2688999999877544
|
|
| >PRK09242 tropinone reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=6.8e-19 Score=153.82 Aligned_cols=176 Identities=14% Similarity=0.142 Sum_probs=136.2
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
+++|+++||||+|+||+++++.|+++|++|++++|+........+++....+ +.++.++.+|+++++++.++++.
T Consensus 7 ~~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~~ 83 (257)
T PRK09242 7 LDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFP---EREVHGLAADVSDDEDRRAILDWVE 83 (257)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCC---CCeEEEEECCCCCHHHHHHHHHHHH
Confidence 3578999999999999999999999999999999976554444444432211 14688899999999988877764
Q ss_pred ---CCCCEEEEcccccc----hhhhhcChHHHHHHhHHHHHHHHHHHH----HcCCCEEEEeccccccCCCCCCCccCCC
Q 019795 80 ---QKFEAVIHFGALKA----VAESVQHPFRYFDNNLIGTINLYQAMA----KYNCKKLVFSSSATIYGQPEKIPCVEDF 148 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~----~~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~v~~Ss~~vyg~~~~~~~~e~~ 148 (335)
.++|+|||+|+... ...+.++++..+++|+.++.++++++. +.+.+++|++||...+.
T Consensus 84 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~----------- 152 (257)
T PRK09242 84 DHWDGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHASSAIVNIGSVSGLT----------- 152 (257)
T ss_pred HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCceEEEECccccCC-----------
Confidence 37899999999732 223456677899999999999999864 34457899999976553
Q ss_pred CCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCCC
Q 019795 149 PYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGAH 191 (335)
Q Consensus 149 ~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~~ 191 (335)
+..+...|+.+|...+.+++.++.++ .++++..++|+.+.++.
T Consensus 153 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~i~t~~ 197 (257)
T PRK09242 153 HVRSGAPYGMTKAALLQMTRNLAVEWAEDGIRVNAVAPWYIRTPL 197 (257)
T ss_pred CCCCCcchHHHHHHHHHHHHHHHHHHHHhCeEEEEEEECCCCCcc
Confidence 23344679999999999999877653 27999999999987763
|
|
| >PRK06949 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=3.6e-19 Score=155.59 Aligned_cols=173 Identities=15% Similarity=0.075 Sum_probs=133.4
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
+++|+++||||+|+||++++++|+++|++|++++|+..........+... ..++.++.+|+++++++.++++.
T Consensus 7 ~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~ 81 (258)
T PRK06949 7 LEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAE-----GGAAHVVSLDVTDYQSIKAAVAHAE 81 (258)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-----CCcEEEEEecCCCHHHHHHHHHHHH
Confidence 35799999999999999999999999999999999755443333333221 14678899999999998888764
Q ss_pred ---CCCCEEEEcccccchh----hhhcChHHHHHHhHHHHHHHHHHHHH----cC--------CCEEEEeccccccCCCC
Q 019795 80 ---QKFEAVIHFGALKAVA----ESVQHPFRYFDNNLIGTINLYQAMAK----YN--------CKKLVFSSSATIYGQPE 140 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~----~~--------~~~~v~~Ss~~vyg~~~ 140 (335)
..+|+|||+|+..... .+.++++.++++|+.++.++++++.. .. ..++|++||...+.
T Consensus 82 ~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~--- 158 (258)
T PRK06949 82 TEAGTIDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLR--- 158 (258)
T ss_pred HhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcccccC---
Confidence 3689999999964321 12356778899999999999988653 11 25899999976542
Q ss_pred CCCccCCCCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 141 KIPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 141 ~~~~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
+..+...|+.+|...+.+++.++.+. .++++++++|+.++++
T Consensus 159 --------~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pG~v~t~ 202 (258)
T PRK06949 159 --------VLPQIGLYCMSKAAVVHMTRAMALEWGRHGINVNAICPGYIDTE 202 (258)
T ss_pred --------CCCCccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCCcCC
Confidence 23345689999999999999887663 3799999999999887
|
|
| >PRK07097 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=8e-19 Score=154.10 Aligned_cols=171 Identities=14% Similarity=0.091 Sum_probs=134.9
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc---
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS--- 79 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~--- 79 (335)
++|+++||||+|+||++++++|+++|++|++++|+........+.+... +.++.++.+|++|.+++.+++++
T Consensus 9 ~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~Dl~~~~~~~~~~~~~~~ 83 (265)
T PRK07097 9 KGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYREL-----GIEAHGYVCDVTDEDGVQAMVSQIEK 83 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhc-----CCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 5689999999999999999999999999999988765554444444321 14688899999999999888875
Q ss_pred --CCCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHHHH----cCCCEEEEecccc-ccCCCCCCCccCCC
Q 019795 80 --QKFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAMAK----YNCKKLVFSSSAT-IYGQPEKIPCVEDF 148 (335)
Q Consensus 80 --~~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~v~~Ss~~-vyg~~~~~~~~e~~ 148 (335)
.++|+|||+||.... ..+.+.++..+++|+.++..+++++.. .+.++||++||.. .+
T Consensus 84 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~------------ 151 (265)
T PRK07097 84 EVGVIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMMSEL------------ 151 (265)
T ss_pred hCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCcEEEEEcCccccC------------
Confidence 468999999997432 234456778899999999988888653 3457899999954 23
Q ss_pred CCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 149 PYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 149 ~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
+..+...|+.+|...+.+++.++.+. .++.+.+++|+.+..+
T Consensus 152 ~~~~~~~Y~~sKaal~~l~~~la~e~~~~gi~v~~v~Pg~v~t~ 195 (265)
T PRK07097 152 GRETVSAYAAAKGGLKMLTKNIASEYGEANIQCNGIGPGYIATP 195 (265)
T ss_pred CCCCCccHHHHHHHHHHHHHHHHHHhhhcCceEEEEEecccccc
Confidence 22345689999999999999988774 3799999999998776
|
|
| >PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=6.6e-19 Score=153.98 Aligned_cols=172 Identities=17% Similarity=0.142 Sum_probs=132.1
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
+++|+||||||+|+||+++++.|++.|++|++++|+ .......+.+.+. +..+.++.+|+++.+++.+++++
T Consensus 13 l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~ 86 (258)
T PRK06935 13 LDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEKE-----GRKVTFVQVDLTKPESAEKVVKEAL 86 (258)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHhc-----CCceEEEEcCCCCHHHHHHHHHHHH
Confidence 357999999999999999999999999999999986 3333333333221 24688999999999998887774
Q ss_pred ---CCCCEEEEcccccc----hhhhhcChHHHHHHhHHHHHHHHHHHH----HcCCCEEEEeccccccCCCCCCCccCCC
Q 019795 80 ---QKFEAVIHFGALKA----VAESVQHPFRYFDNNLIGTINLYQAMA----KYNCKKLVFSSSATIYGQPEKIPCVEDF 148 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~----~~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~v~~Ss~~vyg~~~~~~~~e~~ 148 (335)
..+|++||+|+... .....++++..+++|+.++..+++++. +.+.+++|++||...+.
T Consensus 87 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~----------- 155 (258)
T PRK06935 87 EEFGKIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQGSGKIINIASMLSFQ----------- 155 (258)
T ss_pred HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCeEEEEECCHHhcc-----------
Confidence 37899999998742 122345677889999999988888764 34456899999977652
Q ss_pred CCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 149 PYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 149 ~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
+......|+.+|.+.+.+++.++++. .++++.+++|+.+..+
T Consensus 156 ~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~i~PG~v~t~ 199 (258)
T PRK06935 156 GGKFVPAYTASKHGVAGLTKAFANELAAYNIQVNAIAPGYIKTA 199 (258)
T ss_pred CCCCchhhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEecccccc
Confidence 12233579999999999999988764 2789999999987665
|
|
| >PRK08324 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.82 E-value=5.4e-19 Score=174.14 Aligned_cols=172 Identities=21% Similarity=0.172 Sum_probs=133.2
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
+++|+||||||+|+||+++++.|++.|++|++++|+..........+... ..+.++.+|++|++++.++++.
T Consensus 420 l~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~~------~~v~~v~~Dvtd~~~v~~~~~~~~ 493 (681)
T PRK08324 420 LAGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGP------DRALGVACDVTDEAAVQAAFEEAA 493 (681)
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhcc------CcEEEEEecCCCHHHHHHHHHHHH
Confidence 45689999999999999999999999999999999765443333322211 3678899999999998887764
Q ss_pred ---CCCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHHH----HcCC-CEEEEeccccccCCCCCCCccCC
Q 019795 80 ---QKFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAMA----KYNC-KKLVFSSSATIYGQPEKIPCVED 147 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~-~~~v~~Ss~~vyg~~~~~~~~e~ 147 (335)
.++|+|||+||.... ..+.+.++..+++|+.++.++++++. +.+. ++||++||...+.
T Consensus 494 ~~~g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~~~---------- 563 (681)
T PRK08324 494 LAFGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNAVN---------- 563 (681)
T ss_pred HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCccccC----------
Confidence 379999999996432 22445667889999999999988764 3343 6899999966542
Q ss_pred CCCCCCChhHHhHHHHHHHHHHHHhhCC--CCeEEEEeccccc-CC
Q 019795 148 FPYGAMNPYGRTKQWCEEIAFDVQKADP--EWRIILLRYFNPV-GA 190 (335)
Q Consensus 148 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~~--~~~~~~lR~~~v~-G~ 190 (335)
+......|+.+|...+.+++.++.++. ++++.+++|+.|| +.
T Consensus 564 -~~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~Pg~v~~~t 608 (681)
T PRK08324 564 -PGPNFGAYGAAKAAELHLVRQLALELGPDGIRVNGVNPDAVVRGS 608 (681)
T ss_pred -CCCCcHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCceeecCC
Confidence 223346899999999999999887652 6899999999998 54
|
|
| >PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=6.9e-19 Score=153.59 Aligned_cols=168 Identities=17% Similarity=0.093 Sum_probs=127.1
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
+++|+++||||+|+||++++++|+++|++|+++.++... ..+.+.. .++.++.+|++|++++.++++.
T Consensus 5 l~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~---~~~~l~~-------~~~~~~~~Dl~~~~~~~~~~~~~~ 74 (255)
T PRK06463 5 FKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAEN---EAKELRE-------KGVFTIKCDVGNRDQVKKSKEVVE 74 (255)
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHH---HHHHHHh-------CCCeEEEecCCCHHHHHHHHHHHH
Confidence 456999999999999999999999999999988764432 1222221 2477899999999999888774
Q ss_pred ---CCCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHH----HHcCCCEEEEeccccccCCCCCCCccCCC
Q 019795 80 ---QKFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAM----AKYNCKKLVFSSSATIYGQPEKIPCVEDF 148 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~ 148 (335)
.++|+|||+||.... ..+.++++..+++|+.++..+++++ ++.+.+++|++||...++.
T Consensus 75 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~---------- 144 (255)
T PRK06463 75 KEFGRVDVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSKNGAIVNIASNAGIGT---------- 144 (255)
T ss_pred HHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHhCCC----------
Confidence 378999999987421 2234566788999999987776654 3344569999999776632
Q ss_pred CCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccC
Q 019795 149 PYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVG 189 (335)
Q Consensus 149 ~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G 189 (335)
+......|+.+|.+.+.+++.++.+. .++++.+++|+.+-.
T Consensus 145 ~~~~~~~Y~asKaa~~~~~~~la~e~~~~~i~v~~i~Pg~v~t 187 (255)
T PRK06463 145 AAEGTTFYAITKAGIIILTRRLAFELGKYGIRVNAVAPGWVET 187 (255)
T ss_pred CCCCccHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCCC
Confidence 12234579999999999999988763 278999999987743
|
|
| >PRK08251 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=9.3e-19 Score=152.08 Aligned_cols=175 Identities=14% Similarity=0.138 Sum_probs=132.0
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc---
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS--- 79 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~--- 79 (335)
++|+++||||+|+||++++++|+++|++|++++|++.........+.... ....+.++.+|++|++++.+++++
T Consensus 1 ~~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~ 77 (248)
T PRK08251 1 TRQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARY---PGIKVAVAALDVNDHDQVFEVFAEFRD 77 (248)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhC---CCceEEEEEcCCCCHHHHHHHHHHHHH
Confidence 36899999999999999999999999999999997655444433333211 124688999999999988887764
Q ss_pred --CCCCEEEEcccccchhh----hhcChHHHHHHhHHHHHHHHHHHH----HcCCCEEEEeccccccCCCCCCCccCCCC
Q 019795 80 --QKFEAVIHFGALKAVAE----SVQHPFRYFDNNLIGTINLYQAMA----KYNCKKLVFSSSATIYGQPEKIPCVEDFP 149 (335)
Q Consensus 80 --~~~d~vi~~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~ 149 (335)
.++|+|||+||...... ..+.++..+++|+.++.++++++. +.+.+++|++||...... .
T Consensus 78 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~----------~ 147 (248)
T PRK08251 78 ELGGLDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQGSGHLVLISSVSAVRG----------L 147 (248)
T ss_pred HcCCCCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeccccccC----------C
Confidence 37999999999743221 234456789999999999998864 345679999999654311 1
Q ss_pred CCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 150 YGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 150 ~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
..+...|+.||...+.+++.+..+. .++++++++|+.+.++
T Consensus 148 ~~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~ 190 (248)
T PRK08251 148 PGVKAAYAASKAGVASLGEGLRAELAKTPIKVSTIEPGYIRSE 190 (248)
T ss_pred CCCcccHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcCcch
Confidence 1234689999999999988877664 2789999999988665
|
|
| >PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.82 E-value=1e-18 Score=152.12 Aligned_cols=164 Identities=20% Similarity=0.178 Sum_probs=130.3
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc---
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS--- 79 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~--- 79 (335)
++|++|||||+|+||++++++|+++|++|++++|+. +.. .+..+.++.+|++|++++.+++++
T Consensus 7 ~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~---------~~~-----~~~~~~~~~~D~~~~~~~~~~~~~~~~ 72 (252)
T PRK08220 7 SGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF---------LTQ-----EDYPFATFVLDVSDAAAVAQVCQRLLA 72 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch---------hhh-----cCCceEEEEecCCCHHHHHHHHHHHHH
Confidence 347999999999999999999999999999999864 000 014678899999999999988874
Q ss_pred --CCCCEEEEcccccchh----hhhcChHHHHHHhHHHHHHHHHHHHH----cCCCEEEEeccccccCCCCCCCccCCCC
Q 019795 80 --QKFEAVIHFGALKAVA----ESVQHPFRYFDNNLIGTINLYQAMAK----YNCKKLVFSSSATIYGQPEKIPCVEDFP 149 (335)
Q Consensus 80 --~~~d~vi~~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~v~~Ss~~vyg~~~~~~~~e~~~ 149 (335)
..+|+|||+|+..... .+.+++...+++|+.++..+++++.. .+.+++|++||.... .+
T Consensus 73 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~ss~~~~-----------~~ 141 (252)
T PRK08220 73 ETGPLDVLVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSGAIVTVGSNAAH-----------VP 141 (252)
T ss_pred HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECCchhc-----------cC
Confidence 3689999999974321 23456778899999999999998753 344689999996543 13
Q ss_pred CCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCCC
Q 019795 150 YGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGAH 191 (335)
Q Consensus 150 ~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~~ 191 (335)
..+...|+.+|...+.+++.++.+. .++++.+++|+.++++.
T Consensus 142 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~ 185 (252)
T PRK08220 142 RIGMAAYGASKAALTSLAKCVGLELAPYGVRCNVVSPGSTDTDM 185 (252)
T ss_pred CCCCchhHHHHHHHHHHHHHHHHHhhHhCeEEEEEecCcCcchh
Confidence 3445689999999999998888762 28999999999998873
|
|
| >PRK07035 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=7.5e-19 Score=153.05 Aligned_cols=173 Identities=18% Similarity=0.120 Sum_probs=132.0
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
+++|+++||||+|+||.++++.|++.|++|++++|+........+.+.+. ...+.++.+|+.+.+++.++++.
T Consensus 6 l~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~ 80 (252)
T PRK07035 6 LTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAA-----GGKAEALACHIGEMEQIDALFAHIR 80 (252)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-----CCeEEEEEcCCCCHHHHHHHHHHHH
Confidence 45789999999999999999999999999999998765444444444321 14577899999999988877764
Q ss_pred ---CCCCEEEEcccccc-----hhhhhcChHHHHHHhHHHHHHHHHHHH----HcCCCEEEEeccccccCCCCCCCccCC
Q 019795 80 ---QKFEAVIHFGALKA-----VAESVQHPFRYFDNNLIGTINLYQAMA----KYNCKKLVFSSSATIYGQPEKIPCVED 147 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~-----~~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~v~~Ss~~vyg~~~~~~~~e~ 147 (335)
.++|+|||+|+... ...+.+.++..+++|+.++..+++++. +.+.+++|++||...+.
T Consensus 81 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~---------- 150 (252)
T PRK07035 81 ERHGRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGGGSIVNVASVNGVS---------- 150 (252)
T ss_pred HHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCcEEEEECchhhcC----------
Confidence 36899999998531 122344566789999999999888763 34457899999854331
Q ss_pred CCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 148 FPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 148 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
+..+...|+.||...+.+++.++.+. .++++.++.|+.+-.+
T Consensus 151 -~~~~~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~i~PG~v~t~ 194 (252)
T PRK07035 151 -PGDFQGIYSITKAAVISMTKAFAKECAPFGIRVNALLPGLTDTK 194 (252)
T ss_pred -CCCCCcchHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeccccCc
Confidence 23345689999999999999988764 2789999999887544
|
|
| >PRK08017 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=6.2e-19 Score=153.90 Aligned_cols=164 Identities=18% Similarity=0.195 Sum_probs=121.0
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc----
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS---- 79 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~---- 79 (335)
+|+++||||+|+||+++++.|+++|++|++++|+...... +.+ .++..+.+|++|.+++.++++.
T Consensus 2 ~k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~----~~~-------~~~~~~~~D~~~~~~~~~~~~~i~~~ 70 (256)
T PRK08017 2 QKSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVAR----MNS-------LGFTGILLDLDDPESVERAADEVIAL 70 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHH----HHh-------CCCeEEEeecCCHHHHHHHHHHHHHh
Confidence 5789999999999999999999999999999987543221 111 2467889999999887766653
Q ss_pred --CCCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHH----HHHHHcCCCEEEEeccccccCCCCCCCccCCCC
Q 019795 80 --QKFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLY----QAMAKYNCKKLVFSSSATIYGQPEKIPCVEDFP 149 (335)
Q Consensus 80 --~~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~----~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~ 149 (335)
..+|.++|+|+.... ..+.+.++..++.|+.|+.++. +.+++.+.+++|++||...+. +
T Consensus 71 ~~~~~~~ii~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~-----------~ 139 (256)
T PRK08017 71 TDNRLYGLFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHGEGRIVMTSSVMGLI-----------S 139 (256)
T ss_pred cCCCCeEEEECCCCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCEEEEEcCccccc-----------C
Confidence 368999999986421 1234456688999999988864 445556677999999964321 2
Q ss_pred CCCCChhHHhHHHHHHHHHHHHhh--CCCCeEEEEecccccC
Q 019795 150 YGAMNPYGRTKQWCEEIAFDVQKA--DPEWRIILLRYFNPVG 189 (335)
Q Consensus 150 ~~~~~~Y~~sK~~~E~~~~~~~~~--~~~~~~~~lR~~~v~G 189 (335)
......|+.+|...|.+.+.++.+ ..+++++++||+.+..
T Consensus 140 ~~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t 181 (256)
T PRK08017 140 TPGRGAYAASKYALEAWSDALRMELRHSGIKVSLIEPGPIRT 181 (256)
T ss_pred CCCccHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEeCCCccc
Confidence 234567999999999887765432 2289999999976644
|
|
| >PRK07904 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=4.2e-18 Score=148.39 Aligned_cols=173 Identities=20% Similarity=0.148 Sum_probs=125.6
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCC-CeEEEEecCCCC-chhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc-
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGG-FKVVLIDNLHNS-VPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS- 79 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~- 79 (335)
..|+|+||||+|+||++++++|+++| ++|++++|+... .....+.+.... ..++.++.+|++|++++.++++.
T Consensus 7 ~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~----~~~v~~~~~D~~~~~~~~~~~~~~ 82 (253)
T PRK07904 7 NPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAG----ASSVEVIDFDALDTDSHPKVIDAA 82 (253)
T ss_pred CCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcC----CCceEEEEecCCChHHHHHHHHHH
Confidence 45889999999999999999999995 999999998765 444444444321 13688999999998886665542
Q ss_pred ---CCCCEEEEcccccchhhh-hcC---hHHHHHHhHHHHHHHHH----HHHHcCCCEEEEeccccccCCCCCCCccCCC
Q 019795 80 ---QKFEAVIHFGALKAVAES-VQH---PFRYFDNNLIGTINLYQ----AMAKYNCKKLVFSSSATIYGQPEKIPCVEDF 148 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~~~~~-~~~---~~~~~~~nv~~~~~l~~----~~~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~ 148 (335)
.++|++||++|....... ..+ ..+.+++|+.++..+++ .+++.+.+++|++||...+.
T Consensus 83 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~~~~iv~isS~~g~~----------- 151 (253)
T PRK07904 83 FAGGDVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQGFGQIIAMSSVAGER----------- 151 (253)
T ss_pred HhcCCCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcCCceEEEEechhhcC-----------
Confidence 479999999987532111 111 22568999999887544 45566667999999965321
Q ss_pred CCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 149 PYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 149 ~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
+..+...|+.||+....+.+.+..+. .++++++++|+.+..+
T Consensus 152 ~~~~~~~Y~~sKaa~~~~~~~l~~el~~~~i~v~~v~Pg~v~t~ 195 (253)
T PRK07904 152 VRRSNFVYGSTKAGLDGFYLGLGEALREYGVRVLVVRPGQVRTR 195 (253)
T ss_pred CCCCCcchHHHHHHHHHHHHHHHHHHhhcCCEEEEEeeCceecc
Confidence 12234579999999988777665441 2899999999998664
|
|
| >PRK12744 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=9.2e-19 Score=152.98 Aligned_cols=176 Identities=16% Similarity=0.082 Sum_probs=127.6
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc---
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS--- 79 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~--- 79 (335)
++|+++||||+|+||+++++.|+++|++|++++++.....+..+.+.+... ..+..+.++.+|++|.+++.++++.
T Consensus 7 ~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 85 (257)
T PRK12744 7 KGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVK-AAGAKAVAFQADLTTAAAVEKLFDDAKA 85 (257)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHH-HhCCcEEEEecCcCCHHHHHHHHHHHHH
Confidence 468999999999999999999999999988877654333222222211110 0124688899999999999888774
Q ss_pred --CCCCEEEEcccccc----hhhhhcChHHHHHHhHHHHHHHHHHHHHc--CCCEEEEeccccccCCCCCCCccCCCCCC
Q 019795 80 --QKFEAVIHFGALKA----VAESVQHPFRYFDNNLIGTINLYQAMAKY--NCKKLVFSSSATIYGQPEKIPCVEDFPYG 151 (335)
Q Consensus 80 --~~~d~vi~~a~~~~----~~~~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~ 151 (335)
.++|++||+|+... ...+.++++.++++|+.++..+++++... ..+++++++|+.... +..
T Consensus 86 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~iv~~~ss~~~~-----------~~~ 154 (257)
T PRK12744 86 AFGRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLNDNGKIVTLVTSLLGA-----------FTP 154 (257)
T ss_pred hhCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCEEEEecchhcc-----------cCC
Confidence 37899999999732 22344567789999999999999998653 124667654332221 112
Q ss_pred CCChhHHhHHHHHHHHHHHHhhCC--CCeEEEEecccccCC
Q 019795 152 AMNPYGRTKQWCEEIAFDVQKADP--EWRIILLRYFNPVGA 190 (335)
Q Consensus 152 ~~~~Y~~sK~~~E~~~~~~~~~~~--~~~~~~lR~~~v~G~ 190 (335)
....|+.+|.+.|.+++.++.+.. ++++.+++|+.+..+
T Consensus 155 ~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~t~ 195 (257)
T PRK12744 155 FYSAYAGSKAPVEHFTRAASKEFGARGISVTAVGPGPMDTP 195 (257)
T ss_pred CcccchhhHHHHHHHHHHHHHHhCcCceEEEEEecCccccc
Confidence 235799999999999999988752 689999999988665
|
|
| >PRK12743 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.1e-18 Score=152.45 Aligned_cols=172 Identities=14% Similarity=0.119 Sum_probs=130.9
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCC-chhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNS-VPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
++|+++||||+|+||+++++.|+++|++|+++.++... .....+.+... +..+.++.+|++|.+++.+++++
T Consensus 1 ~~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~Dl~~~~~~~~~~~~~~ 75 (256)
T PRK12743 1 MAQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSH-----GVRAEIRQLDLSDLPEGAQALDKLI 75 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhc-----CCceEEEEccCCCHHHHHHHHHHHH
Confidence 46899999999999999999999999999888664332 22222333221 25688999999999988877764
Q ss_pred ---CCCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHHHHc----C-CCEEEEeccccccCCCCCCCccCC
Q 019795 80 ---QKFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAMAKY----N-CKKLVFSSSATIYGQPEKIPCVED 147 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~~----~-~~~~v~~Ss~~vyg~~~~~~~~e~ 147 (335)
..+|+|||+|+.... ..+.++++..+++|+.++..+++++... + .+++|++||....
T Consensus 76 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~----------- 144 (256)
T PRK12743 76 QRLGRIDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHEH----------- 144 (256)
T ss_pred HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeecccc-----------
Confidence 368999999987432 2234566788999999999999987543 1 2589999996422
Q ss_pred CCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 148 FPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 148 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
.+..+...|+.+|...+.+++.++.+. .+++++.++|+.++++
T Consensus 145 ~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~Pg~~~t~ 189 (256)
T PRK12743 145 TPLPGASAYTAAKHALGGLTKAMALELVEHGILVNAVAPGAIATP 189 (256)
T ss_pred CCCCCcchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCc
Confidence 234455689999999999998887754 2789999999999876
|
|
| >PRK06123 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=5.9e-19 Score=153.28 Aligned_cols=171 Identities=19% Similarity=0.244 Sum_probs=126.7
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCC-CchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc---
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHN-SVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS--- 79 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~--- 79 (335)
++++|||||+|+||++++++|+++|++|+++.++.. ........+... +..+.++.+|++|.+++.++++.
T Consensus 2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~-----~~~~~~~~~Dl~~~~~~~~~~~~~~~ 76 (248)
T PRK06123 2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQ-----GGEALAVAADVADEADVLRLFEAVDR 76 (248)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhC-----CCcEEEEEeccCCHHHHHHHHHHHHH
Confidence 578999999999999999999999999887764432 122222222211 14577899999999999888774
Q ss_pred --CCCCEEEEcccccch-----hhhhcChHHHHHHhHHHHHHHHHHHHHc------C-CCEEEEeccccc-cCCCCCCCc
Q 019795 80 --QKFEAVIHFGALKAV-----AESVQHPFRYFDNNLIGTINLYQAMAKY------N-CKKLVFSSSATI-YGQPEKIPC 144 (335)
Q Consensus 80 --~~~d~vi~~a~~~~~-----~~~~~~~~~~~~~nv~~~~~l~~~~~~~------~-~~~~v~~Ss~~v-yg~~~~~~~ 144 (335)
..+|+|||+|+.... ....++++..+++|+.++.++++++.+. + -+++|++||... ++.+
T Consensus 77 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~----- 151 (248)
T PRK06123 77 ELGRLDALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARLGSP----- 151 (248)
T ss_pred HhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcCCCC-----
Confidence 368999999987432 1133456688999999999999887543 1 236999999654 4321
Q ss_pred cCCCCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 145 VEDFPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 145 ~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
.....|+.+|...|.+++.++.+. ++++++++||+.++++
T Consensus 152 ------~~~~~Y~~sKaa~~~~~~~la~~~~~~~i~v~~i~pg~v~~~ 193 (248)
T PRK06123 152 ------GEYIDYAASKGAIDTMTIGLAKEVAAEGIRVNAVRPGVIYTE 193 (248)
T ss_pred ------CCccchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCc
Confidence 112359999999999999887763 3899999999999997
|
|
| >PRK07825 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=9.5e-19 Score=154.29 Aligned_cols=168 Identities=17% Similarity=0.070 Sum_probs=126.5
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
+++|+++||||||+||+++++.|+++|++|++++|++.......+.+ ..+.++.+|++|++++.++++.
T Consensus 3 ~~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~---------~~~~~~~~D~~~~~~~~~~~~~~~ 73 (273)
T PRK07825 3 LRGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAEL---------GLVVGGPLDVTDPASFAAFLDAVE 73 (273)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---------ccceEEEccCCCHHHHHHHHHHHH
Confidence 35689999999999999999999999999999988654332222211 2467899999999988776664
Q ss_pred ---CCCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHHH----HcCCCEEEEeccccccCCCCCCCccCCC
Q 019795 80 ---QKFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAMA----KYNCKKLVFSSSATIYGQPEKIPCVEDF 148 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~v~~Ss~~vyg~~~~~~~~e~~ 148 (335)
..+|++||+||.... ..+.+..+.++++|+.++..+++++. +.+.++||++||...+.
T Consensus 74 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~----------- 142 (273)
T PRK07825 74 ADLGPIDVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRGRGHVVNVASLAGKI----------- 142 (273)
T ss_pred HHcCCCCEEEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEcCccccC-----------
Confidence 378999999997432 12334566789999999999888754 45667999999976542
Q ss_pred CCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccC
Q 019795 149 PYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVG 189 (335)
Q Consensus 149 ~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G 189 (335)
+......|+.+|...+.+.+.+..+. .++++++++|+.+-.
T Consensus 143 ~~~~~~~Y~asKaa~~~~~~~l~~el~~~gi~v~~v~Pg~v~t 185 (273)
T PRK07825 143 PVPGMATYCASKHAVVGFTDAARLELRGTGVHVSVVLPSFVNT 185 (273)
T ss_pred CCCCCcchHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcCcc
Confidence 23345689999998888877766542 289999999987644
|
|
| >PRK07577 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.1e-18 Score=150.27 Aligned_cols=161 Identities=16% Similarity=0.095 Sum_probs=126.4
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
|.+|+++||||+|+||+++++.|+++|++|++++|+.... ....++.+|++|.+++.++++.
T Consensus 1 ~~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~~----------------~~~~~~~~D~~~~~~~~~~~~~~~ 64 (234)
T PRK07577 1 MSSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAIDD----------------FPGELFACDLADIEQTAATLAQIN 64 (234)
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCcccc----------------cCceEEEeeCCCHHHHHHHHHHHH
Confidence 3578999999999999999999999999999999875431 1125688999999888776653
Q ss_pred --CCCCEEEEcccccchh----hhhcChHHHHHHhHHHHHHHHHHHH----HcCCCEEEEeccccccCCCCCCCccCCCC
Q 019795 80 --QKFEAVIHFGALKAVA----ESVQHPFRYFDNNLIGTINLYQAMA----KYNCKKLVFSSSATIYGQPEKIPCVEDFP 149 (335)
Q Consensus 80 --~~~d~vi~~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~ 149 (335)
.++|+|||+|+..... .+.++++..+++|+.++.++++++. +.+.+++|++||...|+.
T Consensus 65 ~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~----------- 133 (234)
T PRK07577 65 EIHPVDAIVNNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLREQGRIVNICSRAIFGA----------- 133 (234)
T ss_pred HhCCCcEEEECCCCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccccccCC-----------
Confidence 3689999999974321 1345666889999999988887754 345679999999876642
Q ss_pred CCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 150 YGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 150 ~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
.....|+.+|...+.+++.++.+. .++.++++||+.+..+
T Consensus 134 -~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~ 175 (234)
T PRK07577 134 -LDRTSYSAAKSALVGCTRTWALELAEYGITVNAVAPGPIETE 175 (234)
T ss_pred -CCchHHHHHHHHHHHHHHHHHHHHHhhCcEEEEEecCcccCc
Confidence 223579999999999988776553 2899999999988765
|
|
| >PRK08703 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.2e-18 Score=150.46 Aligned_cols=175 Identities=15% Similarity=0.155 Sum_probs=129.2
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCC--HHHHHHHHh-
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRN--KDDLDKLFS- 78 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d--~~~~~~~~~- 78 (335)
|++|+++||||+|+||+++++.|+++|++|++++|+........+.+..... ..+.++.+|+++ .+++.++++
T Consensus 4 l~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~ 79 (239)
T PRK08703 4 LSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGH----PEPFAIRFDLMSAEEKEFEQFAAT 79 (239)
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHcCC----CCcceEEeeecccchHHHHHHHHH
Confidence 4568999999999999999999999999999999987655544444433221 346778899975 344444432
Q ss_pred ---c--CCCCEEEEcccccc-----hhhhhcChHHHHHHhHHHHHHHHHHHHH----cCCCEEEEeccccccCCCCCCCc
Q 019795 79 ---S--QKFEAVIHFGALKA-----VAESVQHPFRYFDNNLIGTINLYQAMAK----YNCKKLVFSSSATIYGQPEKIPC 144 (335)
Q Consensus 79 ---~--~~~d~vi~~a~~~~-----~~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~v~~Ss~~vyg~~~~~~~ 144 (335)
. ..+|+|||+|+... ...+.+++...+++|+.++.++++++.. .+..++|++||....
T Consensus 80 i~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~ss~~~~-------- 151 (239)
T PRK08703 80 IAEATQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDASVIFVGESHGE-------- 151 (239)
T ss_pred HHHHhCCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCCCCEEEEEeccccc--------
Confidence 1 36899999999632 1223455667899999999999988754 344689999885432
Q ss_pred cCCCCCCCCChhHHhHHHHHHHHHHHHhhCC---CCeEEEEecccccCCC
Q 019795 145 VEDFPYGAMNPYGRTKQWCEEIAFDVQKADP---EWRIILLRYFNPVGAH 191 (335)
Q Consensus 145 ~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~---~~~~~~lR~~~v~G~~ 191 (335)
.+......|+.+|...+.+++.++.+.. ++++.+++|+.|+++.
T Consensus 152 ---~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~~i~v~~v~pG~v~t~~ 198 (239)
T PRK08703 152 ---TPKAYWGGFGASKAALNYLCKVAADEWERFGNLRANVLVPGPINSPQ 198 (239)
T ss_pred ---cCCCCccchHHhHHHHHHHHHHHHHHhccCCCeEEEEEecCcccCcc
Confidence 1223345799999999999998887752 5899999999998874
|
|
| >PRK07109 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=9.9e-19 Score=158.28 Aligned_cols=173 Identities=11% Similarity=0.103 Sum_probs=131.4
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
+++|+|+||||+|+||+++++.|+++|++|++++|+........+.+... ..++.++.+|++|.++++++++.
T Consensus 6 l~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~-----g~~~~~v~~Dv~d~~~v~~~~~~~~ 80 (334)
T PRK07109 6 IGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAA-----GGEALAVVADVADAEAVQAAADRAE 80 (334)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHc-----CCcEEEEEecCCCHHHHHHHHHHHH
Confidence 34589999999999999999999999999999999765544444444321 14678899999999999888764
Q ss_pred ---CCCCEEEEcccccc----hhhhhcChHHHHHHhHHHHHHHHHHH----HHcCCCEEEEeccccccCCCCCCCccCCC
Q 019795 80 ---QKFEAVIHFGALKA----VAESVQHPFRYFDNNLIGTINLYQAM----AKYNCKKLVFSSSATIYGQPEKIPCVEDF 148 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~----~~~~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~ 148 (335)
.++|++||+|+... ...+.++++..+++|+.++.++++++ ++.+.++||++||...+..
T Consensus 81 ~~~g~iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g~iV~isS~~~~~~---------- 150 (334)
T PRK07109 81 EELGPIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRGAIIQVGSALAYRS---------- 150 (334)
T ss_pred HHCCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEeCChhhccC----------
Confidence 37999999999642 12234566688999999888766664 3444578999999877632
Q ss_pred CCCCCChhHHhHHHHHHHHHHHHhhC----CCCeEEEEecccccCC
Q 019795 149 PYGAMNPYGRTKQWCEEIAFDVQKAD----PEWRIILLRYFNPVGA 190 (335)
Q Consensus 149 ~~~~~~~Y~~sK~~~E~~~~~~~~~~----~~~~~~~lR~~~v~G~ 190 (335)
......|+.+|...+.+++.+..+. .++.+++++|+.+..+
T Consensus 151 -~~~~~~Y~asK~a~~~~~~~l~~el~~~~~~I~v~~v~Pg~v~T~ 195 (334)
T PRK07109 151 -IPLQSAYCAAKHAIRGFTDSLRCELLHDGSPVSVTMVQPPAVNTP 195 (334)
T ss_pred -CCcchHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCccCc
Confidence 2234679999999998888776552 3689999999887654
|
|
| >PRK05650 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.5e-18 Score=152.81 Aligned_cols=170 Identities=15% Similarity=0.145 Sum_probs=131.9
Q ss_pred CeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc-----
Q 019795 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS----- 79 (335)
Q Consensus 5 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~----- 79 (335)
|+|+||||||+||+++++.|+++|++|++++|+..........+... ...+.++.+|++|++++.++++.
T Consensus 1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~-----~~~~~~~~~D~~~~~~~~~~~~~i~~~~ 75 (270)
T PRK05650 1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREA-----GGDGFYQRCDVRDYSQLTALAQACEEKW 75 (270)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-----CCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence 58999999999999999999999999999998765544444444322 14678899999999998887763
Q ss_pred CCCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHH----HHcCCCEEEEeccccccCCCCCCCccCCCCCC
Q 019795 80 QKFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAM----AKYNCKKLVFSSSATIYGQPEKIPCVEDFPYG 151 (335)
Q Consensus 80 ~~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~ 151 (335)
..+|+|||+||.... ..+.++++..+++|+.++.++++++ ++.+.+++|++||...+. +..
T Consensus 76 ~~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~-----------~~~ 144 (270)
T PRK05650 76 GGIDVIVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQKSGRIVNIASMAGLM-----------QGP 144 (270)
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEECChhhcC-----------CCC
Confidence 379999999997432 2233456678899999998877774 445567999999976542 233
Q ss_pred CCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 152 AMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 152 ~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
....|+.+|...+.+.+.++.+. .++.+++++|+.+..+
T Consensus 145 ~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~ 185 (270)
T PRK05650 145 AMSSYNVAKAGVVALSETLLVELADDEIGVHVVCPSFFQTN 185 (270)
T ss_pred CchHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccccC
Confidence 45689999999998888888774 2789999999988765
|
|
| >PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.8e-18 Score=151.04 Aligned_cols=173 Identities=16% Similarity=0.101 Sum_probs=129.0
Q ss_pred CCCCeEEEEcCCC--hhhHHHHHHHHhCCCeEEEEecCCCCc-----------hhhHHhhhhhcCCccccceeEEEccCC
Q 019795 2 ASEKNILVTGGAG--FIGTHCALQLLQGGFKVVLIDNLHNSV-----------PEAVDRVKDLAGPELAKKLEFHVGDLR 68 (335)
Q Consensus 2 ~~~~~vlItGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~-----------~~~~~~~~~~~~~~~~~~i~~~~~Dl~ 68 (335)
+++|+|||||||| +||.+++++|+++|++|++++|++.+. ......+.. .+..+.++.+|++
T Consensus 3 l~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~D~~ 77 (256)
T PRK12748 3 LMKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIES-----YGVRCEHMEIDLS 77 (256)
T ss_pred CCCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHh-----cCCeEEEEECCCC
Confidence 3568999999995 799999999999999999999873211 111111111 1246889999999
Q ss_pred CHHHHHHHHhc-----CCCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHHHHc----CCCEEEEeccccc
Q 019795 69 NKDDLDKLFSS-----QKFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAMAKY----NCKKLVFSSSATI 135 (335)
Q Consensus 69 d~~~~~~~~~~-----~~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~~v~~Ss~~v 135 (335)
+.+++.++++. ..+|+|||+|+.... ..+.++++..+++|+.++.++++++... +.+++|++||...
T Consensus 78 ~~~~~~~~~~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~ 157 (256)
T PRK12748 78 QPYAPNRVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKAGGRIINLTSGQS 157 (256)
T ss_pred CHHHHHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCeEEEEECCccc
Confidence 99988877764 478999999987422 1233456778999999999999987542 3468999999765
Q ss_pred cCCCCCCCccCCCCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 136 YGQPEKIPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 136 yg~~~~~~~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
++ +......|+.+|.+.+.+++.++.+. ++++++.++|+.+..+
T Consensus 158 ~~-----------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~~~t~ 203 (256)
T PRK12748 158 LG-----------PMPDELAYAATKGAIEAFTKSLAPELAEKGITVNAVNPGPTDTG 203 (256)
T ss_pred cC-----------CCCCchHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEeCcccCC
Confidence 53 22344679999999999998877653 3799999999876543
|
|
| >PRK12937 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.5e-18 Score=150.43 Aligned_cols=174 Identities=17% Similarity=0.187 Sum_probs=130.4
Q ss_pred CCCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCc-hhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc
Q 019795 1 MASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSV-PEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS 79 (335)
Q Consensus 1 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~ 79 (335)
|.++|+++||||+|+||+++++.|+++|++|+++.++.... ....+.+... ..++.++.+|++|.+++.++++.
T Consensus 2 ~~~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~Dl~~~~~~~~~~~~ 76 (245)
T PRK12937 2 TLSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAA-----GGRAIAVQADVADAAAVTRLFDA 76 (245)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhc-----CCeEEEEECCCCCHHHHHHHHHH
Confidence 35679999999999999999999999999998887654321 2222222211 25688999999999999888874
Q ss_pred -----CCCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHHHHc--CCCEEEEeccccccCCCCCCCccCCC
Q 019795 80 -----QKFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAMAKY--NCKKLVFSSSATIYGQPEKIPCVEDF 148 (335)
Q Consensus 80 -----~~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~ 148 (335)
.++|+|||+|+.... ..+.++++..+++|+.++.++++++.+. ..+++|++||...+.
T Consensus 77 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~----------- 145 (245)
T PRK12937 77 AETAFGRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLSTSVIAL----------- 145 (245)
T ss_pred HHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEeeccccC-----------
Confidence 379999999997431 2234456678999999999999988654 235899999865431
Q ss_pred CCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 149 PYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 149 ~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
+..+...|+.+|...+.+++.++.+. .++.+.+++|+.+-.+
T Consensus 146 ~~~~~~~Y~~sK~a~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~ 189 (245)
T PRK12937 146 PLPGYGPYAASKAAVEGLVHVLANELRGRGITVNAVAPGPVATE 189 (245)
T ss_pred CCCCCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCccCc
Confidence 23345689999999999999887653 2688899999876544
|
|
| >PRK06139 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.3e-18 Score=156.88 Aligned_cols=172 Identities=14% Similarity=0.134 Sum_probs=132.8
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc---
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS--- 79 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~--- 79 (335)
++|+|+||||||+||+++++.|+++|++|++++|+.....+..+.+... +..+.++.+|++|.+++.++++.
T Consensus 6 ~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~-----g~~~~~~~~Dv~d~~~v~~~~~~~~~ 80 (330)
T PRK06139 6 HGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRAL-----GAEVLVVPTDVTDADQVKALATQAAS 80 (330)
T ss_pred CCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc-----CCcEEEEEeeCCCHHHHHHHHHHHHH
Confidence 3589999999999999999999999999999999766555544444332 14677889999999999888764
Q ss_pred --CCCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHHH----HcCCCEEEEeccccccCCCCCCCccCCCC
Q 019795 80 --QKFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAMA----KYNCKKLVFSSSATIYGQPEKIPCVEDFP 149 (335)
Q Consensus 80 --~~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~ 149 (335)
..+|++|||||.... ..+.+.++..+++|+.++.++++++. +.+..++|++||...+. +
T Consensus 81 ~~g~iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~~g~iV~isS~~~~~-----------~ 149 (330)
T PRK06139 81 FGGRIDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQGHGIFINMISLGGFA-----------A 149 (330)
T ss_pred hcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhcC-----------C
Confidence 479999999996432 22335566789999999999888754 34456899999976542 2
Q ss_pred CCCCChhHHhHHHHHHHHHHHHhhC---CCCeEEEEecccccCC
Q 019795 150 YGAMNPYGRTKQWCEEIAFDVQKAD---PEWRIILLRYFNPVGA 190 (335)
Q Consensus 150 ~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~~lR~~~v~G~ 190 (335)
......|+.||...+.+++.+..+. +++.++++.|+.+..+
T Consensus 150 ~p~~~~Y~asKaal~~~~~sL~~El~~~~gI~V~~v~Pg~v~T~ 193 (330)
T PRK06139 150 QPYAAAYSASKFGLRGFSEALRGELADHPDIHVCDVYPAFMDTP 193 (330)
T ss_pred CCCchhHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEecCCccCc
Confidence 2234579999999888888777663 3789999999988776
|
|
| >PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.6e-18 Score=151.37 Aligned_cols=172 Identities=16% Similarity=0.128 Sum_probs=131.1
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc---
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS--- 79 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~--- 79 (335)
++|+|+||||+|+||++++++|+++|++|++++|+..........+.+. ..++.++.+|++|.+++.+++..
T Consensus 10 ~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~~ 84 (255)
T PRK06113 10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQL-----GGQAFACRCDITSEQELSALADFALS 84 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhc-----CCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 4799999999999999999999999999999998765444443333321 14678889999999998887664
Q ss_pred --CCCCEEEEcccccch---hhhhcChHHHHHHhHHHHHHHHHHHHH----cCCCEEEEeccccccCCCCCCCccCCCCC
Q 019795 80 --QKFEAVIHFGALKAV---AESVQHPFRYFDNNLIGTINLYQAMAK----YNCKKLVFSSSATIYGQPEKIPCVEDFPY 150 (335)
Q Consensus 80 --~~~d~vi~~a~~~~~---~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~ 150 (335)
.++|++||+|+.... ..+.+.++..+++|+.++.++++++.. .+.+++|++||.... .+.
T Consensus 85 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~-----------~~~ 153 (255)
T PRK06113 85 KLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAE-----------NKN 153 (255)
T ss_pred HcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEEeccccc-----------CCC
Confidence 378999999996422 123355667799999999999999763 334589999996543 123
Q ss_pred CCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 151 GAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 151 ~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
.+...|+.+|.+.+.+++.++.+. .++.+.++.|+.+-.+
T Consensus 154 ~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~t~ 195 (255)
T PRK06113 154 INMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTD 195 (255)
T ss_pred CCcchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEeccccccc
Confidence 345679999999999999887653 2688888888877544
|
|
| >PRK07856 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.7e-18 Score=150.82 Aligned_cols=165 Identities=20% Similarity=0.221 Sum_probs=128.7
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
+++|++|||||+|+||++++++|+++|++|++++|+... . . . ...+.++.+|+++++++.++++.
T Consensus 4 ~~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~-----~-~---~----~~~~~~~~~D~~~~~~~~~~~~~~~ 70 (252)
T PRK07856 4 LTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE-----T-V---D----GRPAEFHAADVRDPDQVAALVDAIV 70 (252)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh-----h-h---c----CCceEEEEccCCCHHHHHHHHHHHH
Confidence 346899999999999999999999999999999986532 0 0 0 14678899999999998888764
Q ss_pred ---CCCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHHHH----c-CCCEEEEeccccccCCCCCCCccCC
Q 019795 80 ---QKFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAMAK----Y-NCKKLVFSSSATIYGQPEKIPCVED 147 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~----~-~~~~~v~~Ss~~vyg~~~~~~~~e~ 147 (335)
.++|+|||+||.... ..+.+.++..+++|+.++..+++++.. . +.+++|++||...+.
T Consensus 71 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~---------- 140 (252)
T PRK07856 71 ERHGRLDVLVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGRR---------- 140 (252)
T ss_pred HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccCC----------
Confidence 368999999986321 123345668899999999999998754 1 236899999976542
Q ss_pred CCCCCCChhHHhHHHHHHHHHHHHhhC-CCCeEEEEecccccCC
Q 019795 148 FPYGAMNPYGRTKQWCEEIAFDVQKAD-PEWRIILLRYFNPVGA 190 (335)
Q Consensus 148 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~-~~~~~~~lR~~~v~G~ 190 (335)
+......|+.+|...+.+++.++.++ +.+.+..++|+.+..+
T Consensus 141 -~~~~~~~Y~~sK~a~~~l~~~la~e~~~~i~v~~i~Pg~v~t~ 183 (252)
T PRK07856 141 -PSPGTAAYGAAKAGLLNLTRSLAVEWAPKVRVNAVVVGLVRTE 183 (252)
T ss_pred -CCCCCchhHHHHHHHHHHHHHHHHHhcCCeEEEEEEeccccCh
Confidence 23345689999999999999988875 2478888999887655
|
|
| >PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.4e-18 Score=151.00 Aligned_cols=175 Identities=21% Similarity=0.215 Sum_probs=128.1
Q ss_pred CCCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCC--CHHHHHHHHh
Q 019795 1 MASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLR--NKDDLDKLFS 78 (335)
Q Consensus 1 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~--d~~~~~~~~~ 78 (335)
++++|+++||||+|+||.++++.|++.|++|++++|+..+.......+.+... .++.++.+|++ +++++.++++
T Consensus 9 ~~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~----~~~~~~~~d~~~~~~~~~~~~~~ 84 (247)
T PRK08945 9 LLKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGG----PQPAIIPLDLLTATPQNYQQLAD 84 (247)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcCC----CCceEEEecccCCCHHHHHHHHH
Confidence 35789999999999999999999999999999999976554444444433221 35667777875 6666655544
Q ss_pred c-----CCCCEEEEcccccch-----hhhhcChHHHHHHhHHHHHHHHHHHH----HcCCCEEEEeccccccCCCCCCCc
Q 019795 79 S-----QKFEAVIHFGALKAV-----AESVQHPFRYFDNNLIGTINLYQAMA----KYNCKKLVFSSSATIYGQPEKIPC 144 (335)
Q Consensus 79 ~-----~~~d~vi~~a~~~~~-----~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~v~~Ss~~vyg~~~~~~~ 144 (335)
. .++|+|||+|+.... ..+.+.++..+++|+.++.++++++. +.+.+++|++||.....
T Consensus 85 ~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~------- 157 (247)
T PRK08945 85 TIEEQFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSPAASLVFTSSSVGRQ------- 157 (247)
T ss_pred HHHHHhCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEEccHhhcC-------
Confidence 2 378999999986422 22345567889999999999998864 44567999999965431
Q ss_pred cCCCCCCCCChhHHhHHHHHHHHHHHHhhCC--CCeEEEEecccccCC
Q 019795 145 VEDFPYGAMNPYGRTKQWCEEIAFDVQKADP--EWRIILLRYFNPVGA 190 (335)
Q Consensus 145 ~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~--~~~~~~lR~~~v~G~ 190 (335)
+......|+.+|...+.+++.++.+.. ++++.+++|+.+-.+
T Consensus 158 ----~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~~~~v~pg~v~t~ 201 (247)
T PRK08945 158 ----GRANWGAYAVSKFATEGMMQVLADEYQGTNLRVNCINPGGTRTA 201 (247)
T ss_pred ----CCCCCcccHHHHHHHHHHHHHHHHHhcccCEEEEEEecCCccCc
Confidence 122345799999999999998877642 678888888876443
|
|
| >PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.4e-18 Score=151.27 Aligned_cols=170 Identities=18% Similarity=0.146 Sum_probs=129.7
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc---
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS--- 79 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~--- 79 (335)
++|++|||||+++||++++++|+++|++|++++|+.. ......+... +.++.++.+|++|++++.+++++
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~--~~~~~~~~~~-----~~~~~~~~~Dl~~~~~~~~~~~~~~~ 79 (251)
T PRK12481 7 NGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEA--PETQAQVEAL-----GRKFHFITADLIQQKDIDSIVSQAVE 79 (251)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchH--HHHHHHHHHc-----CCeEEEEEeCCCCHHHHHHHHHHHHH
Confidence 5689999999999999999999999999999887532 2222222221 25678899999999999988874
Q ss_pred --CCCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHHHH----cC-CCEEEEeccccccCCCCCCCccCCC
Q 019795 80 --QKFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAMAK----YN-CKKLVFSSSATIYGQPEKIPCVEDF 148 (335)
Q Consensus 80 --~~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~-~~~~v~~Ss~~vyg~~~~~~~~e~~ 148 (335)
.++|++||+||.... ..+.++++.++++|+.++..+++++.. .+ .++||++||...+..
T Consensus 80 ~~g~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~---------- 149 (251)
T PRK12481 80 VMGHIDILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQG---------- 149 (251)
T ss_pred HcCCCCEEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhcCC----------
Confidence 479999999997432 123456778999999999999887643 22 358999999766521
Q ss_pred CCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 149 PYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 149 ~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
......|+.+|.+.+.+++.++.+. .++++.+++|+.+-.+
T Consensus 150 -~~~~~~Y~asK~a~~~l~~~la~e~~~~girvn~v~PG~v~t~ 192 (251)
T PRK12481 150 -GIRVPSYTASKSAVMGLTRALATELSQYNINVNAIAPGYMATD 192 (251)
T ss_pred -CCCCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCCccC
Confidence 1223479999999999999887753 2899999999887543
|
|
| >PRK09730 putative NAD(P)-binding oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=8.5e-19 Score=152.10 Aligned_cols=173 Identities=18% Similarity=0.169 Sum_probs=126.0
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhCCCeEEEE-ecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc---
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQGGFKVVLI-DNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS--- 79 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~--- 79 (335)
|++++||||+|+||++++++|+++|++|+++ .|++.........+... ...+.++.+|++|++++.++++.
T Consensus 1 ~~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~D~~d~~~i~~~~~~~~~ 75 (247)
T PRK09730 1 MAIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQA-----GGKAFVLQADISDENQVVAMFTAIDQ 75 (247)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhC-----CCeEEEEEccCCCHHHHHHHHHHHHH
Confidence 5799999999999999999999999999875 44433222222222221 14578899999999999888774
Q ss_pred --CCCCEEEEcccccchh-----hhhcChHHHHHHhHHHHHHHHHHHHHc-------CCCEEEEeccccccCCCCCCCcc
Q 019795 80 --QKFEAVIHFGALKAVA-----ESVQHPFRYFDNNLIGTINLYQAMAKY-------NCKKLVFSSSATIYGQPEKIPCV 145 (335)
Q Consensus 80 --~~~d~vi~~a~~~~~~-----~~~~~~~~~~~~nv~~~~~l~~~~~~~-------~~~~~v~~Ss~~vyg~~~~~~~~ 145 (335)
..+|+|||+|+..... .+.++++..+++|+.++..+++++... +.+++|++||...+...
T Consensus 76 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~~~~------ 149 (247)
T PRK09730 76 HDEPLAALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRLGA------ 149 (247)
T ss_pred hCCCCCEEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhccCC------
Confidence 3689999999964221 123455688999999999888875432 12469999996543111
Q ss_pred CCCCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCCC
Q 019795 146 EDFPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGAH 191 (335)
Q Consensus 146 e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~~ 191 (335)
......|+.+|...+.+++.++.++ .+++++++||+.+|++.
T Consensus 150 ----~~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~i~pg~~~~~~ 193 (247)
T PRK09730 150 ----PGEYVDYAASKGAIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEM 193 (247)
T ss_pred ----CCcccchHhHHHHHHHHHHHHHHHHHHhCeEEEEEEeCCCcCcc
Confidence 1112369999999999988776542 38999999999999984
|
|
| >PRK06114 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=2.9e-18 Score=149.61 Aligned_cols=175 Identities=17% Similarity=0.108 Sum_probs=131.6
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCC-chhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc-
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNS-VPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~- 79 (335)
+++|++|||||+|+||++++++|++.|++|++++|+... .....+.+.+. ..++.++.+|++|++++.++++.
T Consensus 6 ~~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~-----~~~~~~~~~D~~~~~~i~~~~~~~ 80 (254)
T PRK06114 6 LDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAA-----GRRAIQIAADVTSKADLRAAVART 80 (254)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhc-----CCceEEEEcCCCCHHHHHHHHHHH
Confidence 357899999999999999999999999999999986543 23333333321 14677899999999998887764
Q ss_pred ----CCCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHHH----HcCCCEEEEeccccccCCCCCCCccCC
Q 019795 80 ----QKFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAMA----KYNCKKLVFSSSATIYGQPEKIPCVED 147 (335)
Q Consensus 80 ----~~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~v~~Ss~~vyg~~~~~~~~e~ 147 (335)
.++|++||+||.... ..+.++++.++++|+.++..+++++. +.+.+++|++||.+.+...
T Consensus 81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~-------- 152 (254)
T PRK06114 81 EAELGALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENGGGSIVNIASMSGIIVN-------- 152 (254)
T ss_pred HHHcCCCCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcEEEEECchhhcCCC--------
Confidence 468999999997432 22345677889999999998888754 3344689999996643111
Q ss_pred CCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 148 FPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 148 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
+..+...|+.+|...+.+++.++.+. .++++.+++|+.+..+
T Consensus 153 -~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~PG~i~t~ 196 (254)
T PRK06114 153 -RGLLQAHYNASKAGVIHLSKSLAMEWVGRGIRVNSISPGYTATP 196 (254)
T ss_pred -CCCCcchHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeecCccCc
Confidence 11124579999999999999887753 2789999999988765
|
|
| >PRK06124 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=2.1e-18 Score=150.60 Aligned_cols=173 Identities=13% Similarity=0.063 Sum_probs=133.3
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
+++|+++||||+|+||+++++.|+++|++|++++|+..........+.+. ..++.++.+|++|++++.++++.
T Consensus 9 ~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~Dl~~~~~~~~~~~~~~ 83 (256)
T PRK06124 9 LAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAA-----GGAAEALAFDIADEEAVAAAFARID 83 (256)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhc-----CCceEEEEccCCCHHHHHHHHHHHH
Confidence 45799999999999999999999999999999999765444333333321 14588999999999988887764
Q ss_pred ---CCCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHHHH----cCCCEEEEeccccccCCCCCCCccCCC
Q 019795 80 ---QKFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAMAK----YNCKKLVFSSSATIYGQPEKIPCVEDF 148 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~v~~Ss~~vyg~~~~~~~~e~~ 148 (335)
.++|+|||+++.... ..+.++++..+++|+.++.++++++.+ .+.+++|++||...+.
T Consensus 84 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~----------- 152 (256)
T PRK06124 84 AEHGRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQGYGRIIAITSIAGQV----------- 152 (256)
T ss_pred HhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEeechhcc-----------
Confidence 368999999996422 223456678899999999999977643 4567999999965431
Q ss_pred CCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 149 PYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 149 ~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
+......|+.+|...+.+++.++.+. .++++..++|+.+.++
T Consensus 153 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~ 196 (256)
T PRK06124 153 ARAGDAVYPAAKQGLTGLMRALAAEFGPHGITSNAIAPGYFATE 196 (256)
T ss_pred CCCCccHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEECCccCc
Confidence 12234589999999999988877653 2799999999998876
|
|
| >PRK06057 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.3e-18 Score=151.94 Aligned_cols=168 Identities=18% Similarity=0.135 Sum_probs=125.7
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
+++|+|+||||+|+||++++++|+++|++|++++|+........+.+ ...++.+|++|+++++++++.
T Consensus 5 ~~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~----------~~~~~~~D~~~~~~~~~~~~~~~ 74 (255)
T PRK06057 5 LAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEV----------GGLFVPTDVTDEDAVNALFDTAA 74 (255)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc----------CCcEEEeeCCCHHHHHHHHHHHH
Confidence 46799999999999999999999999999999998654332222211 125788999999999888874
Q ss_pred ---CCCCEEEEcccccch------hhhhcChHHHHHHhHHHHHHHHHHHH----HcCCCEEEEeccc-cccCCCCCCCcc
Q 019795 80 ---QKFEAVIHFGALKAV------AESVQHPFRYFDNNLIGTINLYQAMA----KYNCKKLVFSSSA-TIYGQPEKIPCV 145 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~~------~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~v~~Ss~-~vyg~~~~~~~~ 145 (335)
.++|+|||+|+.... ..+.+.++..+++|+.++..+++.+. +.+..++|++||. +++|.
T Consensus 75 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~~sS~~~~~g~------- 147 (255)
T PRK06057 75 ETYGSVDIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQGKGSIINTASFVAVMGS------- 147 (255)
T ss_pred HHcCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhCCcEEEEEcchhhccCC-------
Confidence 368999999986421 12234567889999999998888754 3445689998885 34532
Q ss_pred CCCCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 146 EDFPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 146 e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
..+...|+.+|+..+.+++.++.+. .++.++++||+.+.++
T Consensus 148 ----~~~~~~Y~~sKaal~~~~~~l~~~~~~~gi~v~~i~pg~v~t~ 190 (255)
T PRK06057 148 ----ATSQISYTASKGGVLAMSRELGVQFARQGIRVNALCPGPVNTP 190 (255)
T ss_pred ----CCCCcchHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCCcCCc
Confidence 1234579999988887777655442 2799999999998776
|
|
| >PRK06841 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.8e-18 Score=150.90 Aligned_cols=170 Identities=17% Similarity=0.122 Sum_probs=129.6
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
+++|++|||||+|+||+++++.|+++|++|++++|+... ......+ . ...+..+.+|+++++++.++++.
T Consensus 13 ~~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~-~~~~~~~---~----~~~~~~~~~Dl~~~~~~~~~~~~~~ 84 (255)
T PRK06841 13 LSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDV-AEVAAQL---L----GGNAKGLVCDVSDSQSVEAAVAAVI 84 (255)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHH-HHHHHHh---h----CCceEEEEecCCCHHHHHHHHHHHH
Confidence 457899999999999999999999999999999986542 1111111 1 14567899999999998887764
Q ss_pred ---CCCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHHHH----cCCCEEEEeccccccCCCCCCCccCCC
Q 019795 80 ---QKFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAMAK----YNCKKLVFSSSATIYGQPEKIPCVEDF 148 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~v~~Ss~~vyg~~~~~~~~e~~ 148 (335)
.++|+|||+|+.... ..+.++++..+++|+.++.++++++.. .+.+++|++||.....
T Consensus 85 ~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~----------- 153 (255)
T PRK06841 85 SAFGRIDILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLASQAGVV----------- 153 (255)
T ss_pred HHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCceEEEEcchhhcc-----------
Confidence 268999999997432 123345667899999999999998754 3457999999965321
Q ss_pred CCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 149 PYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 149 ~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
+......|+.+|...+.+++.++.++ .++.+..++|+.+..+
T Consensus 154 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pg~v~t~ 197 (255)
T PRK06841 154 ALERHVAYCASKAGVVGMTKVLALEWGPYGITVNAISPTVVLTE 197 (255)
T ss_pred CCCCCchHHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCcCcCc
Confidence 12234579999999999999888764 2789999999988665
|
|
| >PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=1e-18 Score=153.18 Aligned_cols=170 Identities=16% Similarity=0.168 Sum_probs=128.4
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
+++|+++||||+|+||+++++.|+++|++|++++|+..........+ +.++.++.+|++|.+++.++++.
T Consensus 4 ~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~--------~~~~~~~~~D~~~~~~~~~~~~~~~ 75 (263)
T PRK06200 4 LHGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRF--------GDHVLVVEGDVTSYADNQRAVDQTV 75 (263)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh--------CCcceEEEccCCCHHHHHHHHHHHH
Confidence 45689999999999999999999999999999998654332222211 14578899999999988887764
Q ss_pred ---CCCCEEEEcccccchh-----hhhc----ChHHHHHHhHHHHHHHHHHHHHc---CCCEEEEeccccccCCCCCCCc
Q 019795 80 ---QKFEAVIHFGALKAVA-----ESVQ----HPFRYFDNNLIGTINLYQAMAKY---NCKKLVFSSSATIYGQPEKIPC 144 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~~~-----~~~~----~~~~~~~~nv~~~~~l~~~~~~~---~~~~~v~~Ss~~vyg~~~~~~~ 144 (335)
.++|++||+|+..... .+.+ .++..+++|+.++..+++++... ..+++|++||...+.
T Consensus 76 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~------- 148 (263)
T PRK06200 76 DAFGKLDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKASGGSMIFTLSNSSFY------- 148 (263)
T ss_pred HhcCCCCEEEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhcCCEEEEECChhhcC-------
Confidence 3799999999974211 1111 25677899999999999887542 225899999977652
Q ss_pred cCCCCCCCCChhHHhHHHHHHHHHHHHhhC-CCCeEEEEecccccCC
Q 019795 145 VEDFPYGAMNPYGRTKQWCEEIAFDVQKAD-PEWRIILLRYFNPVGA 190 (335)
Q Consensus 145 ~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-~~~~~~~lR~~~v~G~ 190 (335)
+..+...|+.+|...+.+++.++.+. +++++..+.|+.+..+
T Consensus 149 ----~~~~~~~Y~~sK~a~~~~~~~la~el~~~Irvn~i~PG~i~t~ 191 (263)
T PRK06200 149 ----PGGGGPLYTASKHAVVGLVRQLAYELAPKIRVNGVAPGGTVTD 191 (263)
T ss_pred ----CCCCCchhHHHHHHHHHHHHHHHHHHhcCcEEEEEeCCccccC
Confidence 22334579999999999999988874 3588999999887544
|
|
| >PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=2.2e-18 Score=151.40 Aligned_cols=162 Identities=19% Similarity=0.146 Sum_probs=127.9
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
+++|+++||||+|+||+++++.|+++|++|++++++...... ..+.++.+|++|++++.++++.
T Consensus 7 l~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~~--------------~~~~~~~~D~~~~~~~~~~~~~~~ 72 (266)
T PRK06171 7 LQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQH--------------ENYQFVPTDVSSAEEVNHTVAEII 72 (266)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcccccc--------------CceEEEEccCCCHHHHHHHHHHHH
Confidence 357899999999999999999999999999999987544211 3577899999999999887774
Q ss_pred ---CCCCEEEEcccccch-------------hhhhcChHHHHHHhHHHHHHHHHHHHHc----CCCEEEEeccccccCCC
Q 019795 80 ---QKFEAVIHFGALKAV-------------AESVQHPFRYFDNNLIGTINLYQAMAKY----NCKKLVFSSSATIYGQP 139 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~~-------------~~~~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~~v~~Ss~~vyg~~ 139 (335)
..+|+|||+||.... ..+.++++.++++|+.++..+++++... +..++|++||...+.
T Consensus 73 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~-- 150 (266)
T PRK06171 73 EKFGRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQHDGVIVNMSSEAGLE-- 150 (266)
T ss_pred HHcCCCCEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcCCcEEEEEccccccC--
Confidence 378999999996321 1234566788999999999999987642 345899999976542
Q ss_pred CCCCccCCCCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEeccccc
Q 019795 140 EKIPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPV 188 (335)
Q Consensus 140 ~~~~~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~ 188 (335)
+......|+.+|...+.+++.++.+. .++++.+++|+.+-
T Consensus 151 ---------~~~~~~~Y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~~~ 192 (266)
T PRK06171 151 ---------GSEGQSCYAATKAALNSFTRSWAKELGKHNIRVVGVAPGILE 192 (266)
T ss_pred ---------CCCCCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeccccc
Confidence 22334689999999999999888764 27899999998763
|
|
| >PRK07576 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=2e-18 Score=151.49 Aligned_cols=170 Identities=16% Similarity=0.137 Sum_probs=129.0
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc----
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS---- 79 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~---- 79 (335)
+|+++||||+|+||+++++.|+++|++|++++|++.........+... ..++.++.+|++|++++.++++.
T Consensus 9 ~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~i~~~~~~~~~~ 83 (264)
T PRK07576 9 GKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQA-----GPEGLGVSADVRDYAAVEAAFAQIADE 83 (264)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHh-----CCceEEEECCCCCHHHHHHHHHHHHHH
Confidence 479999999999999999999999999999998755433333333221 14567889999999999888764
Q ss_pred -CCCCEEEEcccccc----hhhhhcChHHHHHHhHHHHHHHHHHHHHc---CCCEEEEeccccccCCCCCCCccCCCCCC
Q 019795 80 -QKFEAVIHFGALKA----VAESVQHPFRYFDNNLIGTINLYQAMAKY---NCKKLVFSSSATIYGQPEKIPCVEDFPYG 151 (335)
Q Consensus 80 -~~~d~vi~~a~~~~----~~~~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~ 151 (335)
.++|++||+|+... ...+.++++..+++|+.++.++++++... ..++||++||...+. +..
T Consensus 84 ~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~~g~iv~iss~~~~~-----------~~~ 152 (264)
T PRK07576 84 FGPIDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRPGASIIQISAPQAFV-----------PMP 152 (264)
T ss_pred cCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCEEEEECChhhcc-----------CCC
Confidence 36899999997532 12234456678999999999999987542 225899999965431 233
Q ss_pred CCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccC
Q 019795 152 AMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVG 189 (335)
Q Consensus 152 ~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G 189 (335)
....|+.+|...+.+++.++.+. .+++++.++|+.+.+
T Consensus 153 ~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~pg~~~~ 192 (264)
T PRK07576 153 MQAHVCAAKAGVDMLTRTLALEWGPEGIRVNSIVPGPIAG 192 (264)
T ss_pred CccHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccccC
Confidence 45679999999999999887664 378999999987764
|
|
| >PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.80 E-value=3e-18 Score=149.37 Aligned_cols=171 Identities=18% Similarity=0.128 Sum_probs=131.1
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
+++|+++|||++|+||++++++|++.|++|+++++... .+..+.+... ...+..+.+|++|.+++.+++++
T Consensus 8 l~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~--~~~~~~~~~~-----~~~~~~~~~Dl~~~~~~~~~~~~~~ 80 (253)
T PRK08993 8 LEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEP--TETIEQVTAL-----GRRFLSLTADLRKIDGIPALLERAV 80 (253)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcch--HHHHHHHHhc-----CCeEEEEECCCCCHHHHHHHHHHHH
Confidence 45789999999999999999999999999998876432 3333333322 14678899999999999888875
Q ss_pred ---CCCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHHHHc----C-CCEEEEeccccccCCCCCCCccCC
Q 019795 80 ---QKFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAMAKY----N-CKKLVFSSSATIYGQPEKIPCVED 147 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~~----~-~~~~v~~Ss~~vyg~~~~~~~~e~ 147 (335)
.++|++||+||.... ..+.++++..+++|+.++.++++++... + -+++|++||...+..
T Consensus 81 ~~~~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~--------- 151 (253)
T PRK08993 81 AEFGHIDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQG--------- 151 (253)
T ss_pred HHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhhccC---------
Confidence 479999999997422 2234567789999999999999986542 2 258999999776532
Q ss_pred CCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 148 FPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 148 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
......|+.+|.+.+.+++.++.+. .++++..++|+.+-.+
T Consensus 152 --~~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pG~v~T~ 194 (253)
T PRK08993 152 --GIRVPSYTASKSGVMGVTRLMANEWAKHNINVNAIAPGYMATN 194 (253)
T ss_pred --CCCCcchHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccCc
Confidence 1223479999999999999888774 2789999999888554
|
|
| >PRK07677 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.9e-18 Score=150.51 Aligned_cols=170 Identities=18% Similarity=0.131 Sum_probs=130.4
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc----
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS---- 79 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~---- 79 (335)
+|+++||||+|+||+++++.|++.|++|++++|+........+.+.+. +..+.++.+|++|++++.++++.
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~ 75 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQF-----PGQVLTVQMDVRNPEDVQKMVEQIDEK 75 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-----CCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 589999999999999999999999999999999765444443333321 14688999999999999887764
Q ss_pred -CCCCEEEEcccccc----hhhhhcChHHHHHHhHHHHHHHHHHHHH----cC-CCEEEEeccccccCCCCCCCccCCCC
Q 019795 80 -QKFEAVIHFGALKA----VAESVQHPFRYFDNNLIGTINLYQAMAK----YN-CKKLVFSSSATIYGQPEKIPCVEDFP 149 (335)
Q Consensus 80 -~~~d~vi~~a~~~~----~~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~-~~~~v~~Ss~~vyg~~~~~~~~e~~~ 149 (335)
..+|+|||+|+... ...+.+.++.++++|+.++.++++++.+ .+ .+++|++||...+. +
T Consensus 76 ~~~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~-----------~ 144 (252)
T PRK07677 76 FGRIDALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYAWD-----------A 144 (252)
T ss_pred hCCccEEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhhcc-----------C
Confidence 37899999998532 1224455678999999999999999743 22 35899999865331 1
Q ss_pred CCCCChhHHhHHHHHHHHHHHHhhC---CCCeEEEEecccccC
Q 019795 150 YGAMNPYGRTKQWCEEIAFDVQKAD---PEWRIILLRYFNPVG 189 (335)
Q Consensus 150 ~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~~lR~~~v~G 189 (335)
......|+.+|...+.+++.++.++ .++++.+++|+.+..
T Consensus 145 ~~~~~~Y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~PG~v~~ 187 (252)
T PRK07677 145 GPGVIHSAAAKAGVLAMTRTLAVEWGRKYGIRVNAIAPGPIER 187 (252)
T ss_pred CCCCcchHHHHHHHHHHHHHHHHHhCcccCeEEEEEeeccccc
Confidence 2233479999999999999877764 278999999988864
|
|
| >PRK08278 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=3.3e-18 Score=150.83 Aligned_cols=171 Identities=15% Similarity=0.134 Sum_probs=127.3
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchh-------hHHhhhhhcCCccccceeEEEccCCCHHHHH
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPE-------AVDRVKDLAGPELAKKLEFHVGDLRNKDDLD 74 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-------~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~ 74 (335)
+++|+++||||+|+||+++++.|+++|++|++++|+...... ..+.+.. .+.++.++.+|+++++++.
T Consensus 4 ~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~-----~~~~~~~~~~D~~~~~~i~ 78 (273)
T PRK08278 4 LSGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEA-----AGGQALPLVGDVRDEDQVA 78 (273)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHh-----cCCceEEEEecCCCHHHHH
Confidence 346899999999999999999999999999999987643211 1122211 1246788999999999998
Q ss_pred HHHhc-----CCCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHHHHc----CCCEEEEeccccccCCCCC
Q 019795 75 KLFSS-----QKFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAMAKY----NCKKLVFSSSATIYGQPEK 141 (335)
Q Consensus 75 ~~~~~-----~~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~~v~~Ss~~vyg~~~~ 141 (335)
++++. .++|+|||+||.... ..+.++++..+++|+.++.++++++... +-.++|++||.... .
T Consensus 79 ~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~--~-- 154 (273)
T PRK08278 79 AAVAKAVERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENPHILTLSPPLNL--D-- 154 (273)
T ss_pred HHHHHHHHHhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCEEEEECCchhc--c--
Confidence 88775 379999999997432 1233456788999999999999997642 33588898874321 0
Q ss_pred CCccCCCCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEeccc
Q 019795 142 IPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFN 186 (335)
Q Consensus 142 ~~~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~ 186 (335)
.....+...|+.+|.+.|.+++.++.+. .++.+..+.|+.
T Consensus 155 -----~~~~~~~~~Y~~sK~a~~~~~~~la~el~~~~I~v~~i~Pg~ 196 (273)
T PRK08278 155 -----PKWFAPHTAYTMAKYGMSLCTLGLAEEFRDDGIAVNALWPRT 196 (273)
T ss_pred -----ccccCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeCCC
Confidence 0111455689999999999999988775 268888888873
|
|
| >PRK12938 acetyacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=3.5e-18 Score=148.24 Aligned_cols=173 Identities=16% Similarity=0.123 Sum_probs=127.5
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCC-CCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc-
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLH-NSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~- 79 (335)
|++|+++|||++|+||++++++|++.|+.|+++.+.. .......+.+... ...+..+.+|++|.+++.+++++
T Consensus 1 ~~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~ 75 (246)
T PRK12938 1 MSQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKAL-----GFDFIASEGNVGDWDSTKAAFDKV 75 (246)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhc-----CCcEEEEEcCCCCHHHHHHHHHHH
Confidence 5689999999999999999999999999988864422 2222222222211 14577889999999998887764
Q ss_pred ----CCCCEEEEcccccc----hhhhhcChHHHHHHhHHHHHHHHHHHH----HcCCCEEEEeccccccCCCCCCCccCC
Q 019795 80 ----QKFEAVIHFGALKA----VAESVQHPFRYFDNNLIGTINLYQAMA----KYNCKKLVFSSSATIYGQPEKIPCVED 147 (335)
Q Consensus 80 ----~~~d~vi~~a~~~~----~~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~v~~Ss~~vyg~~~~~~~~e~ 147 (335)
.++|+|||+|+... ...+.++++.++++|+.++..+++++. +.+.+++|++||.....
T Consensus 76 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~---------- 145 (246)
T PRK12938 76 KAEVGEIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQK---------- 145 (246)
T ss_pred HHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEechhccC----------
Confidence 37899999999742 222445677889999999888777654 44567999999964321
Q ss_pred CCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 148 FPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 148 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
+..+...|+.+|.+.+.+++.++.+. .++.+.+++|+.+.++
T Consensus 146 -~~~~~~~y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~~~t~ 189 (246)
T PRK12938 146 -GQFGQTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTD 189 (246)
T ss_pred -CCCCChhHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEecccCCc
Confidence 22345689999999999888777653 2789999999988765
|
|
| >PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.8e-18 Score=148.98 Aligned_cols=215 Identities=22% Similarity=0.195 Sum_probs=148.3
Q ss_pred EEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCCCEEE
Q 019795 7 ILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKFEAVI 86 (335)
Q Consensus 7 vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~d~vi 86 (335)
|+|+||||.+|+++++.|++.+++|+++.|+..+ ...+.+.+ .+++++.+|+.|++++.++++ ++|+||
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~--~~~~~l~~-------~g~~vv~~d~~~~~~l~~al~--g~d~v~ 69 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSS--DRAQQLQA-------LGAEVVEADYDDPESLVAALK--GVDAVF 69 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHH--HHHHHHHH-------TTTEEEES-TT-HHHHHHHHT--TCSEEE
T ss_pred CEEECCccHHHHHHHHHHHhCCCCcEEEEeccch--hhhhhhhc-------ccceEeecccCCHHHHHHHHc--CCceEE
Confidence 7999999999999999999999999999997632 22233332 467889999999999999999 899999
Q ss_pred EcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccCCCCCCCccCCCCCCCCChhHHhHHHHHHH
Q 019795 87 HFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQWCEEI 166 (335)
Q Consensus 87 ~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~Y~~sK~~~E~~ 166 (335)
.+.+... ..-+....+++++|++.|+++||+.|....+. +.....|..+.-..|...|+.
T Consensus 70 ~~~~~~~------------~~~~~~~~~li~Aa~~agVk~~v~ss~~~~~~--------~~~~~~p~~~~~~~k~~ie~~ 129 (233)
T PF05368_consen 70 SVTPPSH------------PSELEQQKNLIDAAKAAGVKHFVPSSFGADYD--------ESSGSEPEIPHFDQKAEIEEY 129 (233)
T ss_dssp EESSCSC------------CCHHHHHHHHHHHHHHHT-SEEEESEESSGTT--------TTTTSTTHHHHHHHHHHHHHH
T ss_pred eecCcch------------hhhhhhhhhHHHhhhccccceEEEEEeccccc--------ccccccccchhhhhhhhhhhh
Confidence 8776532 01233456799999999999999744433331 111223333455678888888
Q ss_pred HHHHHhhCCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHH--HhCCCCceeEecccCCCCCCceeeeee-eH
Q 019795 167 AFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQV--AVGRHPELNVYGQDYPTKDGSAVRDYI-HV 243 (335)
Q Consensus 167 ~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~--~~~~~~~~~~~g~~~~~~~~~~~~~~v-~~ 243 (335)
+++. +++++++|++..+.. +...+... ..+....+.+.+ ++.....++ ..
T Consensus 130 l~~~-----~i~~t~i~~g~f~e~----------------~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~ 182 (233)
T PF05368_consen 130 LRES-----GIPYTIIRPGFFMEN----------------LLPPFAPVVDIKKSKDVVTLPG------PGNQKAVPVTDT 182 (233)
T ss_dssp HHHC-----TSEBEEEEE-EEHHH----------------HHTTTHHTTCSCCTSSEEEEET------TSTSEEEEEEHH
T ss_pred hhhc-----cccceeccccchhhh----------------hhhhhcccccccccceEEEEcc------CCCccccccccH
Confidence 7654 899999999876553 11111110 011111255666 666666775 99
Q ss_pred hhhhc-------------cCceEEecCCccccHHHHHHHHHHHhCCCCCc
Q 019795 244 MDLAD-------------GCIAYNLGNGKGISVLEMVAAFEKASGKKIPI 280 (335)
Q Consensus 244 ~D~~~-------------~~~~~nv~~~~~~s~~el~~~i~~~~g~~~~~ 280 (335)
+|+++ .++.+.++ ++.+|..|+++.+.+.+|+++..
T Consensus 183 ~Dvg~~va~il~~p~~~~~~~~~~~~-~~~~t~~eia~~~s~~~G~~v~y 231 (233)
T PF05368_consen 183 RDVGRAVAAILLDPEKHNNGKTIFLA-GETLTYNEIAAILSKVLGKKVKY 231 (233)
T ss_dssp HHHHHHHHHHHHSGGGTTEEEEEEEG-GGEEEHHHHHHHHHHHHTSEEEE
T ss_pred HHHHHHHHHHHcChHHhcCCEEEEeC-CCCCCHHHHHHHHHHHHCCccEE
Confidence 99987 24667764 58899999999999999987543
|
NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B .... |
| >PRK07023 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.3e-18 Score=150.72 Aligned_cols=163 Identities=19% Similarity=0.124 Sum_probs=124.2
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc----
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS---- 79 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~---- 79 (335)
||++|||||||+||++++++|+++|++|++++|+.... . ... ...++.++.+|++|.+++.+++..
T Consensus 1 ~~~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~~--~----~~~----~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 70 (243)
T PRK07023 1 AVRAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPS--L----AAA----AGERLAEVELDLSDAAAAAAWLAGDLLA 70 (243)
T ss_pred CceEEEecCCcchHHHHHHHHHhCCCEEEEEecCcchh--h----hhc----cCCeEEEEEeccCCHHHHHHHHHHHHHH
Confidence 45899999999999999999999999999999875431 1 111 114688899999999988885543
Q ss_pred -----CCCCEEEEcccccch-----hhhhcChHHHHHHhHHHHHHHHHHHHH----cCCCEEEEeccccccCCCCCCCcc
Q 019795 80 -----QKFEAVIHFGALKAV-----AESVQHPFRYFDNNLIGTINLYQAMAK----YNCKKLVFSSSATIYGQPEKIPCV 145 (335)
Q Consensus 80 -----~~~d~vi~~a~~~~~-----~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~v~~Ss~~vyg~~~~~~~~ 145 (335)
..+|++||+|+.... ..+.+.++..+++|+.++..+++.+.. .+.+++|++||...+.
T Consensus 71 ~~~~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~-------- 142 (243)
T PRK07023 71 AFVDGASRVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAAERRILHISSGAARN-------- 142 (243)
T ss_pred HhccCCCceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccCCCEEEEEeChhhcC--------
Confidence 268999999987432 112345668899999998887776543 3446999999977652
Q ss_pred CCCCCCCCChhHHhHHHHHHHHHHHHhhC-CCCeEEEEecccc
Q 019795 146 EDFPYGAMNPYGRTKQWCEEIAFDVQKAD-PEWRIILLRYFNP 187 (335)
Q Consensus 146 e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-~~~~~~~lR~~~v 187 (335)
+..+...|+.+|...|.+++.++.+. .++++.+++|+.+
T Consensus 143 ---~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~i~v~~v~pg~~ 182 (243)
T PRK07023 143 ---AYAGWSVYCATKAALDHHARAVALDANRALRIVSLAPGVV 182 (243)
T ss_pred ---CCCCchHHHHHHHHHHHHHHHHHhcCCCCcEEEEecCCcc
Confidence 33456689999999999999887652 2789999999766
|
|
| >PRK06953 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=3e-18 Score=146.42 Aligned_cols=167 Identities=14% Similarity=0.079 Sum_probs=128.6
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc---C
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS---Q 80 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~---~ 80 (335)
||+++||||+|+||+++++.|+++|++|++++|+..... .+.. .++.++.+|+++.+++.+++.. .
T Consensus 1 ~~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~----~~~~-------~~~~~~~~D~~~~~~v~~~~~~~~~~ 69 (222)
T PRK06953 1 MKTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALA----ALQA-------LGAEALALDVADPASVAGLAWKLDGE 69 (222)
T ss_pred CceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHH----HHHh-------ccceEEEecCCCHHHHHHHHHHhcCC
Confidence 579999999999999999999999999999998754322 2221 2356899999999998887543 3
Q ss_pred CCCEEEEcccccch------hhhhcChHHHHHHhHHHHHHHHHHHHHc---CCCEEEEecccc-ccCCCCCCCccCCCCC
Q 019795 81 KFEAVIHFGALKAV------AESVQHPFRYFDNNLIGTINLYQAMAKY---NCKKLVFSSSAT-IYGQPEKIPCVEDFPY 150 (335)
Q Consensus 81 ~~d~vi~~a~~~~~------~~~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~~v~~Ss~~-vyg~~~~~~~~e~~~~ 150 (335)
.+|+|||+++.... ..+.++++..+++|+.++.++++++... ...++|++||.. .++.. +.
T Consensus 70 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~---------~~ 140 (222)
T PRK06953 70 ALDAAVYVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAAGGVLAVLSSRMGSIGDA---------TG 140 (222)
T ss_pred CCCEEEECCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhccCCeEEEEcCcccccccc---------cC
Confidence 68999999987521 1145567789999999999999998652 234788988854 44321 11
Q ss_pred CCCChhHHhHHHHHHHHHHHHhhCCCCeEEEEecccccCC
Q 019795 151 GAMNPYGRTKQWCEEIAFDVQKADPEWRIILLRYFNPVGA 190 (335)
Q Consensus 151 ~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~lR~~~v~G~ 190 (335)
.+...|+.+|...+.+++.+..+++++++..++|+.+..+
T Consensus 141 ~~~~~Y~~sK~a~~~~~~~~~~~~~~i~v~~v~Pg~i~t~ 180 (222)
T PRK06953 141 TTGWLYRASKAALNDALRAASLQARHATCIALHPGWVRTD 180 (222)
T ss_pred CCccccHHhHHHHHHHHHHHhhhccCcEEEEECCCeeecC
Confidence 2224699999999999999888877899999999988665
|
|
| >PRK08226 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=3.6e-18 Score=149.76 Aligned_cols=173 Identities=16% Similarity=0.115 Sum_probs=130.3
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
+++|+++||||+|+||+++++.|+++|++|++++|+.. .....+.+... ..++.++.+|+++++++.++++.
T Consensus 4 ~~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~-~~~~~~~~~~~-----~~~~~~~~~Dl~~~~~v~~~~~~~~ 77 (263)
T PRK08226 4 LTGKTALITGALQGIGEGIARVFARHGANLILLDISPE-IEKLADELCGR-----GHRCTAVVADVRDPASVAAAIKRAK 77 (263)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHH-HHHHHHHHHHh-----CCceEEEECCCCCHHHHHHHHHHHH
Confidence 34689999999999999999999999999999998643 22222222211 14677899999999998888774
Q ss_pred ---CCCCEEEEcccccchh----hhhcChHHHHHHhHHHHHHHHHHHHH----cCCCEEEEeccccccCCCCCCCccCCC
Q 019795 80 ---QKFEAVIHFGALKAVA----ESVQHPFRYFDNNLIGTINLYQAMAK----YNCKKLVFSSSATIYGQPEKIPCVEDF 148 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~v~~Ss~~vyg~~~~~~~~e~~ 148 (335)
..+|+|||+|+..... .+.+..+..+++|+.++.++++++.. .+.+++|++||..... .
T Consensus 78 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~----------~ 147 (263)
T PRK08226 78 EKEGRIDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDM----------V 147 (263)
T ss_pred HHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhcc----------c
Confidence 3789999999974321 12345557899999999999998653 3446899999854310 0
Q ss_pred CCCCCChhHHhHHHHHHHHHHHHhhCC--CCeEEEEecccccCC
Q 019795 149 PYGAMNPYGRTKQWCEEIAFDVQKADP--EWRIILLRYFNPVGA 190 (335)
Q Consensus 149 ~~~~~~~Y~~sK~~~E~~~~~~~~~~~--~~~~~~lR~~~v~G~ 190 (335)
+......|+.+|...|.+++.++.++. ++++..++|+.+.++
T Consensus 148 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~i~pg~v~t~ 191 (263)
T PRK08226 148 ADPGETAYALTKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTP 191 (263)
T ss_pred CCCCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccCH
Confidence 222345799999999999998887652 789999999998776
|
|
| >PRK12824 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=4.8e-18 Score=147.23 Aligned_cols=172 Identities=15% Similarity=0.094 Sum_probs=128.8
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc----
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS---- 79 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~---- 79 (335)
+|+++||||+|+||+++++.|+++|++|++++|+.. ... +.+..... .....+.++.+|++|.+++.++++.
T Consensus 2 ~k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~--~~~-~~~~~~~~-~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 77 (245)
T PRK12824 2 KKIALVTGAKRGIGSAIARELLNDGYRVIATYFSGN--DCA-KDWFEEYG-FTEDQVRLKELDVTDTEECAEALAEIEEE 77 (245)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcH--HHH-HHHHHHhh-ccCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 579999999999999999999999999999998753 111 11111100 1124688999999999988887764
Q ss_pred -CCCCEEEEcccccc----hhhhhcChHHHHHHhHHHHHHHHHHH----HHcCCCEEEEeccccccCCCCCCCccCCCCC
Q 019795 80 -QKFEAVIHFGALKA----VAESVQHPFRYFDNNLIGTINLYQAM----AKYNCKKLVFSSSATIYGQPEKIPCVEDFPY 150 (335)
Q Consensus 80 -~~~d~vi~~a~~~~----~~~~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~ 150 (335)
..+|++||+|+... ...+.+.++.++++|+.++.++++++ ++.+.+++|++||...+.. .
T Consensus 78 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~-----------~ 146 (245)
T PRK12824 78 EGPVDILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQGYGRIINISSVNGLKG-----------Q 146 (245)
T ss_pred cCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEECChhhccC-----------C
Confidence 36999999998642 22345667788999999999987654 4455679999999765521 2
Q ss_pred CCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 151 GAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 151 ~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
.....|+.+|.+.+.+++.++.+. .++++.+++|+.+.++
T Consensus 147 ~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~ 188 (245)
T PRK12824 147 FGQTNYSAAKAGMIGFTKALASEGARYGITVNCIAPGYIATP 188 (245)
T ss_pred CCChHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEEcccCCc
Confidence 233579999999999988877542 2789999999998776
|
|
| >TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.80 E-value=2.2e-18 Score=151.08 Aligned_cols=169 Identities=17% Similarity=0.172 Sum_probs=127.1
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc---
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS--- 79 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~--- 79 (335)
++|+++||||+|+||++++++|+++|++|++++|+..... .+.+.. +..+.++.+|++|.+++.++++.
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~----~l~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~ 75 (262)
T TIGR03325 4 KGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQ----ELEAAH----GDAVVGVEGDVRSLDDHKEAVARCVA 75 (262)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHH----HHHhhc----CCceEEEEeccCCHHHHHHHHHHHHH
Confidence 5799999999999999999999999999999998653322 222211 14678899999999888877764
Q ss_pred --CCCCEEEEcccccchh----h-hh----cChHHHHHHhHHHHHHHHHHHHHc---CCCEEEEeccccccCCCCCCCcc
Q 019795 80 --QKFEAVIHFGALKAVA----E-SV----QHPFRYFDNNLIGTINLYQAMAKY---NCKKLVFSSSATIYGQPEKIPCV 145 (335)
Q Consensus 80 --~~~d~vi~~a~~~~~~----~-~~----~~~~~~~~~nv~~~~~l~~~~~~~---~~~~~v~~Ss~~vyg~~~~~~~~ 145 (335)
.++|++||+||..... . .. +.++..+++|+.++..+++++.+. ..+++|++||...+.
T Consensus 76 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~~sS~~~~~-------- 147 (262)
T TIGR03325 76 AFGKIDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVASRGSVIFTISNAGFY-------- 147 (262)
T ss_pred HhCCCCEEEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhcCCCEEEEeccceec--------
Confidence 4789999999863210 1 11 246688999999999999997653 225788888855431
Q ss_pred CCCCCCCCChhHHhHHHHHHHHHHHHhhC-CCCeEEEEecccccCC
Q 019795 146 EDFPYGAMNPYGRTKQWCEEIAFDVQKAD-PEWRIILLRYFNPVGA 190 (335)
Q Consensus 146 e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-~~~~~~~lR~~~v~G~ 190 (335)
+......|+.+|...+.+++.++.++ +.+++..+.|+.+..+
T Consensus 148 ---~~~~~~~Y~~sKaa~~~l~~~la~e~~~~irvn~i~PG~i~t~ 190 (262)
T TIGR03325 148 ---PNGGGPLYTAAKHAVVGLVKELAFELAPYVRVNGVAPGGMSSD 190 (262)
T ss_pred ---CCCCCchhHHHHHHHHHHHHHHHHhhccCeEEEEEecCCCcCC
Confidence 22234579999999999999998875 3488999999988654
|
Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase. |
| >TIGR01289 LPOR light-dependent protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=99.80 E-value=3.3e-18 Score=153.76 Aligned_cols=182 Identities=13% Similarity=0.079 Sum_probs=132.1
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCC-CeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGG-FKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
++|+++||||+++||.++++.|+++| ++|++++|+.....+..+.+.. .+..+.++.+|++|.++++++++.
T Consensus 2 ~~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~-----~~~~~~~~~~Dl~~~~~v~~~~~~~~ 76 (314)
T TIGR01289 2 QKPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGM-----PKDSYTIMHLDLGSLDSVRQFVQQFR 76 (314)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcC-----CCCeEEEEEcCCCCHHHHHHHHHHHH
Confidence 57899999999999999999999999 9999999876544333333321 124677889999999998887764
Q ss_pred ---CCCCEEEEcccccch-----hhhhcChHHHHHHhHHHHHHHHHHHHH----cC--CCEEEEeccccccCCCCC----
Q 019795 80 ---QKFEAVIHFGALKAV-----AESVQHPFRYFDNNLIGTINLYQAMAK----YN--CKKLVFSSSATIYGQPEK---- 141 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~~-----~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~--~~~~v~~Ss~~vyg~~~~---- 141 (335)
.++|++||+||.... ..+.+.++..+++|+.++..+++++.. .+ .++||++||...+.....
T Consensus 77 ~~~~~iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS~~~~~~~~~~~~~ 156 (314)
T TIGR01289 77 ESGRPLDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGSITGNTNTLAGNVP 156 (314)
T ss_pred HhCCCCCEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEecCccccccCCCcCC
Confidence 369999999997321 123456678899999999998887543 22 369999999766432100
Q ss_pred CC------------------ccCCCCCCCCChhHHhHHHHHHHHHHHHhhC---CCCeEEEEecccccC
Q 019795 142 IP------------------CVEDFPYGAMNPYGRTKQWCEEIAFDVQKAD---PEWRIILLRYFNPVG 189 (335)
Q Consensus 142 ~~------------------~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~~lR~~~v~G 189 (335)
.+ ..+..+..+...|+.||.+...++++++++. .++.+++++||.|..
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~ 225 (314)
T TIGR01289 157 PKANLGDLSGLAAGFKAPIAMIDGKEFKGAKAYKDSKVCNMLTVRELHRRFHDETGITFASLYPGCIAD 225 (314)
T ss_pred CcccccccccccccCCCcccccCCCCcchhhhHHHhHHHHHHHHHHHHHHhccCCCeEEEEecCCcccC
Confidence 00 0111233455679999999888888887664 278999999998853
|
This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form. |
| >PRK07062 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=4.7e-18 Score=149.19 Aligned_cols=174 Identities=13% Similarity=0.085 Sum_probs=131.6
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc---
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS--- 79 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~--- 79 (335)
++|+++||||+|+||+++++.|+++|++|++++|+..+.....+.+....+ ..++..+.+|++|.+++.++++.
T Consensus 7 ~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~ 83 (265)
T PRK07062 7 EGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFP---GARLLAARCDVLDEADVAAFAAAVEA 83 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCC---CceEEEEEecCCCHHHHHHHHHHHHH
Confidence 368999999999999999999999999999999987655554444433211 13677899999999998887764
Q ss_pred --CCCCEEEEcccccc----hhhhhcChHHHHHHhHHHHHHHHHHHH----HcCCCEEEEeccccccCCCCCCCccCCCC
Q 019795 80 --QKFEAVIHFGALKA----VAESVQHPFRYFDNNLIGTINLYQAMA----KYNCKKLVFSSSATIYGQPEKIPCVEDFP 149 (335)
Q Consensus 80 --~~~d~vi~~a~~~~----~~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~ 149 (335)
..+|++||+||... ...+.+.+...+++|+.++..+++.+. +.+.+++|++||...+. +
T Consensus 84 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~ 152 (265)
T PRK07062 84 RFGGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASAAASIVCVNSLLALQ-----------P 152 (265)
T ss_pred hcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCcEEEEeccccccC-----------C
Confidence 36899999999642 122344667889999999888887754 33456899999976442 2
Q ss_pred CCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 150 YGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 150 ~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
......|+.+|...+.+++.++.+. .++++.+++|+.+-.+
T Consensus 153 ~~~~~~y~asKaal~~~~~~la~e~~~~gi~v~~i~PG~v~t~ 195 (265)
T PRK07062 153 EPHMVATSAARAGLLNLVKSLATELAPKGVRVNSILLGLVESG 195 (265)
T ss_pred CCCchHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccc
Confidence 2234579999999998888777663 2789999999887554
|
|
| >TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.6e-17 Score=143.31 Aligned_cols=167 Identities=20% Similarity=0.207 Sum_probs=126.2
Q ss_pred EEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCC-chhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc-----C
Q 019795 7 ILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNS-VPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-----Q 80 (335)
Q Consensus 7 vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-----~ 80 (335)
|||||++|+||+++++.|+++|++|++++|+... .....+.+... ...+.++.+|++|.++++++++. .
T Consensus 1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 75 (239)
T TIGR01830 1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAY-----GVKALGVVCDVSDREDVKAVVEEIEEELG 75 (239)
T ss_pred CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhc-----CCceEEEEecCCCHHHHHHHHHHHHHHhC
Confidence 5899999999999999999999999999886532 22222222211 14578999999999998888764 3
Q ss_pred CCCEEEEcccccc----hhhhhcChHHHHHHhHHHHHHHHHHHHH----cCCCEEEEecccc-ccCCCCCCCccCCCCCC
Q 019795 81 KFEAVIHFGALKA----VAESVQHPFRYFDNNLIGTINLYQAMAK----YNCKKLVFSSSAT-IYGQPEKIPCVEDFPYG 151 (335)
Q Consensus 81 ~~d~vi~~a~~~~----~~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~v~~Ss~~-vyg~~~~~~~~e~~~~~ 151 (335)
.+|+|||+|+... ...+.+.++..+++|+.++.++++++.. .+.+++|++||.. .||. .
T Consensus 76 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~g~------------~ 143 (239)
T TIGR01830 76 PIDILVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSVVGLMGN------------A 143 (239)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCccccCCC------------C
Confidence 6899999999743 2223456678899999999999998765 3456999999954 4542 2
Q ss_pred CCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 152 AMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 152 ~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
+...|+.+|.+.+.+++.++.+. +++.+.++||+.+.++
T Consensus 144 ~~~~y~~~k~a~~~~~~~l~~~~~~~g~~~~~i~pg~~~~~ 184 (239)
T TIGR01830 144 GQANYAASKAGVIGFTKSLAKELASRNITVNAVAPGFIDTD 184 (239)
T ss_pred CCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCCCCh
Confidence 34579999999999888876652 3899999999877554
|
This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis. |
| >PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed | Back alignment and domain information |
|---|
Probab=99.80 E-value=3.7e-18 Score=147.89 Aligned_cols=168 Identities=15% Similarity=0.130 Sum_probs=125.6
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc---
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS--- 79 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~--- 79 (335)
++++++||||+|+||+++++.|+++|+.|++.+|+..........+ +.++.++.+|+++.+++.+++++
T Consensus 5 ~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~--------~~~~~~~~~D~~~~~~~~~~~~~~~~ 76 (245)
T PRK12936 5 SGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAEL--------GERVKIFPANLSDRDEVKALGQKAEA 76 (245)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh--------CCceEEEEccCCCHHHHHHHHHHHHH
Confidence 4689999999999999999999999999888877544332222111 14678899999999998887653
Q ss_pred --CCCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHHHH----cCCCEEEEeccccc-cCCCCCCCccCCC
Q 019795 80 --QKFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAMAK----YNCKKLVFSSSATI-YGQPEKIPCVEDF 148 (335)
Q Consensus 80 --~~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~v~~Ss~~v-yg~~~~~~~~e~~ 148 (335)
.++|+|||+|+.... ..+.++++..+++|+.++.++++++.. .+.+++|++||... ++.
T Consensus 77 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~---------- 146 (245)
T PRK12936 77 DLEGVDILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYGRIINITSVVGVTGN---------- 146 (245)
T ss_pred HcCCCCEEEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEEEECCHHhCcCC----------
Confidence 369999999997432 123456678899999999999988643 34578999999643 432
Q ss_pred CCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 149 PYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 149 ~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
.....|+.+|...+.+++.++.+. .++++++++|+.+..+
T Consensus 147 --~~~~~Y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~ 188 (245)
T PRK12936 147 --PGQANYCASKAGMIGFSKSLAQEIATRNVTVNCVAPGFIESA 188 (245)
T ss_pred --CCCcchHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcCcCc
Confidence 123479999998888887766553 2799999999876443
|
|
| >PRK07831 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=6.7e-18 Score=147.94 Aligned_cols=175 Identities=21% Similarity=0.193 Sum_probs=133.1
Q ss_pred CCCCeEEEEcCCC-hhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc-
Q 019795 2 ASEKNILVTGGAG-FIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS- 79 (335)
Q Consensus 2 ~~~~~vlItGatG-~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~- 79 (335)
+++|+++||||+| .||+++++.|+++|++|++++|+........+.+.+..+ ..++.++.+|+++++++.++++.
T Consensus 15 ~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~ 91 (262)
T PRK07831 15 LAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELG---LGRVEAVVCDVTSEAQVDALIDAA 91 (262)
T ss_pred cCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcC---CceEEEEEccCCCHHHHHHHHHHH
Confidence 5679999999997 799999999999999999999876555444444433111 13578899999999988887764
Q ss_pred ----CCCCEEEEcccccc----hhhhhcChHHHHHHhHHHHHHHHHHHHH----cC-CCEEEEeccccccCCCCCCCccC
Q 019795 80 ----QKFEAVIHFGALKA----VAESVQHPFRYFDNNLIGTINLYQAMAK----YN-CKKLVFSSSATIYGQPEKIPCVE 146 (335)
Q Consensus 80 ----~~~d~vi~~a~~~~----~~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~-~~~~v~~Ss~~vyg~~~~~~~~e 146 (335)
..+|+|||+|+... ...+.+.+...+++|+.++..+++++.. .+ ..++|++||...+
T Consensus 92 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~~~---------- 161 (262)
T PRK07831 92 VERLGRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLGW---------- 161 (262)
T ss_pred HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhc----------
Confidence 47899999999642 1223356677899999999999988653 22 3578888885432
Q ss_pred CCCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 147 DFPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 147 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
.+..+...|+.+|.+.+.+++.++.+. .++++.+++|+.+..+
T Consensus 162 -~~~~~~~~Y~~sKaal~~~~~~la~e~~~~gI~v~~i~Pg~~~t~ 206 (262)
T PRK07831 162 -RAQHGQAHYAAAKAGVMALTRCSALEAAEYGVRINAVAPSIAMHP 206 (262)
T ss_pred -CCCCCCcchHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccCc
Confidence 122345579999999999999988763 2799999999988776
|
|
| >PRK05867 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=2e-18 Score=150.55 Aligned_cols=175 Identities=14% Similarity=0.109 Sum_probs=131.3
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
+++|++|||||+|+||+++++.|+++|++|++++|+........+.+... +.++..+.+|++|++++.+++++
T Consensus 7 ~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~ 81 (253)
T PRK05867 7 LHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTS-----GGKVVPVCCDVSQHQQVTSMLDQVT 81 (253)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc-----CCeEEEEEccCCCHHHHHHHHHHHH
Confidence 45789999999999999999999999999999998765544444443321 14678899999999998887764
Q ss_pred ---CCCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHHHH----cC-CCEEEEeccccccCCCCCCCccCC
Q 019795 80 ---QKFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAMAK----YN-CKKLVFSSSATIYGQPEKIPCVED 147 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~-~~~~v~~Ss~~vyg~~~~~~~~e~ 147 (335)
.++|++||+|+.... ..+.+.++..+++|+.++..+++++.. .+ ..++|++||....-.
T Consensus 82 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~--------- 152 (253)
T PRK05867 82 AELGGIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGHII--------- 152 (253)
T ss_pred HHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHHhcCC---------
Confidence 489999999997432 223455667889999999999998653 22 247899988543200
Q ss_pred CCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 148 FPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 148 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
........|+.+|...+.+++.++.+. .++++.+++|+.+-.+
T Consensus 153 ~~~~~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~i~PG~v~t~ 197 (253)
T PRK05867 153 NVPQQVSHYCASKAAVIHLTKAMAVELAPHKIRVNSVSPGYILTE 197 (253)
T ss_pred CCCCCccchHHHHHHHHHHHHHHHHHHhHhCeEEEEeecCCCCCc
Confidence 011123579999999999999988764 2789999999887554
|
|
| >PRK12742 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=5.7e-18 Score=146.08 Aligned_cols=170 Identities=14% Similarity=0.134 Sum_probs=126.9
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc-C
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-Q 80 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-~ 80 (335)
+++|+||||||+|+||++++++|+++|++|+++.++... ..+.+... .++.++.+|++|.+++.++++. .
T Consensus 4 ~~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~---~~~~l~~~------~~~~~~~~D~~~~~~~~~~~~~~~ 74 (237)
T PRK12742 4 FTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKD---AAERLAQE------TGATAVQTDSADRDAVIDVVRKSG 74 (237)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHH---HHHHHHHH------hCCeEEecCCCCHHHHHHHHHHhC
Confidence 346899999999999999999999999999887664221 11222111 1356788999999988888875 3
Q ss_pred CCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHHHHc--CCCEEEEeccccccCCCCCCCccCCCCCCCCC
Q 019795 81 KFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAMAKY--NCKKLVFSSSATIYGQPEKIPCVEDFPYGAMN 154 (335)
Q Consensus 81 ~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~ 154 (335)
.+|++||+|+.... ..+.++++..+++|+.++..+++.+... ..+++|++||.... ..+..+..
T Consensus 75 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~----------~~~~~~~~ 144 (237)
T PRK12742 75 ALDILVVNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVNGD----------RMPVAGMA 144 (237)
T ss_pred CCcEEEECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEeccccc----------cCCCCCCc
Confidence 58999999987432 2234567789999999999998776553 23689999995431 11334566
Q ss_pred hhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 155 PYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 155 ~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
.|+.+|...|.+++.++.+. .++++.+++|+.+..+
T Consensus 145 ~Y~~sKaa~~~~~~~la~~~~~~gi~v~~v~Pg~~~t~ 182 (237)
T PRK12742 145 AYAASKSALQGMARGLARDFGPRGITINVVQPGPIDTD 182 (237)
T ss_pred chHHhHHHHHHHHHHHHHHHhhhCeEEEEEecCcccCC
Confidence 89999999999999877763 2799999999888654
|
|
| >PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=3.6e-18 Score=148.10 Aligned_cols=173 Identities=19% Similarity=0.131 Sum_probs=130.3
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEE-ecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc-
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLI-DNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~- 79 (335)
+++|++|||||||+||+++++.|++.|++|+++ +|+..........+... ..++.++.+|++|++++.++++.
T Consensus 3 ~~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~ 77 (247)
T PRK05565 3 LMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEE-----GGDAIAVKADVSSEEDVENLVEQI 77 (247)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc-----CCeEEEEECCCCCHHHHHHHHHHH
Confidence 456899999999999999999999999999998 88655443333333221 14688999999999998887764
Q ss_pred ----CCCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHHHH----cCCCEEEEeccccccCCCCCCCccCC
Q 019795 80 ----QKFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAMAK----YNCKKLVFSSSATIYGQPEKIPCVED 147 (335)
Q Consensus 80 ----~~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~v~~Ss~~vyg~~~~~~~~e~ 147 (335)
.++|+|||+++.... ..+.+.++..+++|+.++.++++++.. .+.+++|++||...+..
T Consensus 78 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~--------- 148 (247)
T PRK05565 78 VEKFGKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKSGVIVNISSIWGLIG--------- 148 (247)
T ss_pred HHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCHhhccC---------
Confidence 279999999997522 223445678899999999999888754 34568999999665421
Q ss_pred CCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 148 FPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 148 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
......|+.+|...+.+++.+..+. .++.++++||+.+..+
T Consensus 149 --~~~~~~y~~sK~a~~~~~~~~~~~~~~~gi~~~~v~pg~v~t~ 191 (247)
T PRK05565 149 --ASCEVLYSASKGAVNAFTKALAKELAPSGIRVNAVAPGAIDTE 191 (247)
T ss_pred --CCCccHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCccCc
Confidence 1223479999999888888776652 3899999999987654
|
|
| >PRK06483 dihydromonapterin reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=6e-18 Score=145.89 Aligned_cols=165 Identities=15% Similarity=0.151 Sum_probs=126.0
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc---
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS--- 79 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~--- 79 (335)
++|++|||||+|+||+++++.|+++|++|++++|++... .+.+.. .++.++.+|++|.+++.++++.
T Consensus 1 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~---~~~~~~-------~~~~~~~~D~~~~~~~~~~~~~~~~ 70 (236)
T PRK06483 1 MPAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPA---IDGLRQ-------AGAQCIQADFSTNAGIMAFIDELKQ 70 (236)
T ss_pred CCceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhH---HHHHHH-------cCCEEEEcCCCCHHHHHHHHHHHHh
Confidence 468999999999999999999999999999999875432 222221 2367899999999988887765
Q ss_pred --CCCCEEEEcccccchh----hhhcChHHHHHHhHHHHHHHHHHHHH----cC--CCEEEEeccccccCCCCCCCccCC
Q 019795 80 --QKFEAVIHFGALKAVA----ESVQHPFRYFDNNLIGTINLYQAMAK----YN--CKKLVFSSSATIYGQPEKIPCVED 147 (335)
Q Consensus 80 --~~~d~vi~~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~----~~--~~~~v~~Ss~~vyg~~~~~~~~e~ 147 (335)
.++|++||+|+..... .+.++++..+++|+.++..+++.+.. .+ ..++|++||....
T Consensus 71 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~~----------- 139 (236)
T PRK06483 71 HTDGLRAIIHNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVVE----------- 139 (236)
T ss_pred hCCCccEEEECCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhhc-----------
Confidence 2599999999863221 13456778999999999988887654 22 3589999885432
Q ss_pred CCCCCCChhHHhHHHHHHHHHHHHhhC-CCCeEEEEeccccc
Q 019795 148 FPYGAMNPYGRTKQWCEEIAFDVQKAD-PEWRIILLRYFNPV 188 (335)
Q Consensus 148 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~-~~~~~~~lR~~~v~ 188 (335)
.+......|+.+|...+.+++.++.++ +++++.+++|+.+.
T Consensus 140 ~~~~~~~~Y~asKaal~~l~~~~a~e~~~~irvn~v~Pg~~~ 181 (236)
T PRK06483 140 KGSDKHIAYAASKAALDNMTLSFAAKLAPEVKVNSIAPALIL 181 (236)
T ss_pred cCCCCCccHHHHHHHHHHHHHHHHHHHCCCcEEEEEccCcee
Confidence 122234579999999999999998875 36899999998773
|
|
| >PRK06079 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=4.7e-18 Score=148.05 Aligned_cols=171 Identities=15% Similarity=0.075 Sum_probs=129.4
Q ss_pred CCCCCeEEEEcCC--ChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHh
Q 019795 1 MASEKNILVTGGA--GFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFS 78 (335)
Q Consensus 1 ~~~~~~vlItGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~ 78 (335)
|+++|+++||||+ +.||++++++|+++|++|++++|+. ... +.+.+... ..+.++.+|++|+++++++++
T Consensus 4 ~l~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~-~~~---~~~~~~~~----~~~~~~~~Dl~~~~~v~~~~~ 75 (252)
T PRK06079 4 ILSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQND-RMK---KSLQKLVD----EEDLLVECDVASDESIERAFA 75 (252)
T ss_pred ccCCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCch-HHH---HHHHhhcc----CceeEEeCCCCCHHHHHHHHH
Confidence 4678999999999 7999999999999999999998862 222 22222211 357789999999999888776
Q ss_pred c-----CCCCEEEEcccccch--------hhhhcChHHHHHHhHHHHHHHHHHHHHc--CCCEEEEeccccccCCCCCCC
Q 019795 79 S-----QKFEAVIHFGALKAV--------AESVQHPFRYFDNNLIGTINLYQAMAKY--NCKKLVFSSSATIYGQPEKIP 143 (335)
Q Consensus 79 ~-----~~~d~vi~~a~~~~~--------~~~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~v~~Ss~~vyg~~~~~~ 143 (335)
. .++|++||+||.... ..+.++++..+++|+.++..+++++... ..+++|++||....
T Consensus 76 ~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~------- 148 (252)
T PRK06079 76 TIKERVGKIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNPGASIVTLTYFGSE------- 148 (252)
T ss_pred HHHHHhCCCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhcccCceEEEEeccCcc-------
Confidence 4 479999999996421 1234567788999999999999987653 22589999985432
Q ss_pred ccCCCCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 144 CVEDFPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 144 ~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
.+......|+.+|...+.+++.++.+. .++++.++.|+.|-.+
T Consensus 149 ----~~~~~~~~Y~asKaal~~l~~~la~el~~~gI~vn~i~PG~v~T~ 193 (252)
T PRK06079 149 ----RAIPNYNVMGIAKAALESSVRYLARDLGKKGIRVNAISAGAVKTL 193 (252)
T ss_pred ----ccCCcchhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCccccc
Confidence 122234579999999999999988774 2789999999887554
|
|
| >PRK06505 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=5.6e-18 Score=149.08 Aligned_cols=173 Identities=14% Similarity=0.029 Sum_probs=128.7
Q ss_pred CCCCCeEEEEcCCC--hhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHh
Q 019795 1 MASEKNILVTGGAG--FIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFS 78 (335)
Q Consensus 1 ~~~~~~vlItGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~ 78 (335)
||++|++|||||++ .||++++++|+++|++|++++|+... .+..+.+.+.. .....+.+|++|.++++++++
T Consensus 4 ~l~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~-~~~~~~~~~~~-----g~~~~~~~Dv~d~~~v~~~~~ 77 (271)
T PRK06505 4 LMQGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEAL-GKRVKPLAESL-----GSDFVLPCDVEDIASVDAVFE 77 (271)
T ss_pred ccCCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHH-HHHHHHHHHhc-----CCceEEeCCCCCHHHHHHHHH
Confidence 56789999999997 99999999999999999999886322 12222222211 123468899999999988877
Q ss_pred c-----CCCCEEEEcccccc--------hhhhhcChHHHHHHhHHHHHHHHHHHHHc--CCCEEEEeccccccCCCCCCC
Q 019795 79 S-----QKFEAVIHFGALKA--------VAESVQHPFRYFDNNLIGTINLYQAMAKY--NCKKLVFSSSATIYGQPEKIP 143 (335)
Q Consensus 79 ~-----~~~d~vi~~a~~~~--------~~~~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~v~~Ss~~vyg~~~~~~ 143 (335)
. .++|++|||||... ...+.++++..+++|+.++.++++++... .-+++|++||.....
T Consensus 78 ~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~~G~Iv~isS~~~~~------ 151 (271)
T PRK06505 78 ALEKKWGKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPDGGSMLTLTYGGSTR------ 151 (271)
T ss_pred HHHHHhCCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhccCceEEEEcCCCccc------
Confidence 5 47999999999642 12345667788999999999999886542 125899999865321
Q ss_pred ccCCCCCCCCChhHHhHHHHHHHHHHHHhhCC--CCeEEEEecccccCC
Q 019795 144 CVEDFPYGAMNPYGRTKQWCEEIAFDVQKADP--EWRIILLRYFNPVGA 190 (335)
Q Consensus 144 ~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~--~~~~~~lR~~~v~G~ 190 (335)
+......|+.+|...+.+++.++.++. ++++.++.|+.+-.+
T Consensus 152 -----~~~~~~~Y~asKaAl~~l~r~la~el~~~gIrVn~v~PG~i~T~ 195 (271)
T PRK06505 152 -----VMPNYNVMGVAKAALEASVRYLAADYGPQGIRVNAISAGPVRTL 195 (271)
T ss_pred -----cCCccchhhhhHHHHHHHHHHHHHHHhhcCeEEEEEecCCcccc
Confidence 222345799999999999999888742 789999999887554
|
|
| >PRK06198 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=3.6e-18 Score=149.42 Aligned_cols=175 Identities=19% Similarity=0.148 Sum_probs=133.5
Q ss_pred CCCCCeEEEEcCCChhhHHHHHHHHhCCCe-EEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc
Q 019795 1 MASEKNILVTGGAGFIGTHCALQLLQGGFK-VVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS 79 (335)
Q Consensus 1 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~ 79 (335)
++++|+++||||+|+||+++++.|+++|++ |++++|+........+.+.+. +..+.++.+|+++++++.++++.
T Consensus 3 ~~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~-----~~~~~~~~~D~~~~~~~~~~~~~ 77 (260)
T PRK06198 3 RLDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEAL-----GAKAVFVQADLSDVEDCRRVVAA 77 (260)
T ss_pred CCCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhc-----CCeEEEEEccCCCHHHHHHHHHH
Confidence 356789999999999999999999999999 999998754433333333211 24678899999999998888764
Q ss_pred -----CCCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHHHHc----C-CCEEEEeccccccCCCCCCCcc
Q 019795 80 -----QKFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAMAKY----N-CKKLVFSSSATIYGQPEKIPCV 145 (335)
Q Consensus 80 -----~~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~~----~-~~~~v~~Ss~~vyg~~~~~~~~ 145 (335)
.++|+|||+|+.... ..+.+.++..+++|+.++.++++++.+. + .+++|++||...++.
T Consensus 78 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~~~------- 150 (260)
T PRK06198 78 ADEAFGRLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAHGG------- 150 (260)
T ss_pred HHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCcccccC-------
Confidence 368999999997432 2234455678999999999999887542 2 357999999876642
Q ss_pred CCCCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCCC
Q 019795 146 EDFPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGAH 191 (335)
Q Consensus 146 e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~~ 191 (335)
......|+.+|...|.+++.++.+. .++.++.++|+.++++.
T Consensus 151 ----~~~~~~Y~~sK~a~~~~~~~~a~e~~~~~i~v~~i~pg~~~t~~ 194 (260)
T PRK06198 151 ----QPFLAAYCASKGALATLTRNAAYALLRNRIRVNGLNIGWMATEG 194 (260)
T ss_pred ----CCCcchhHHHHHHHHHHHHHHHHHhcccCeEEEEEeeccccCcc
Confidence 1234579999999999999877654 26889999999988873
|
|
| >PRK06947 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=4.8e-18 Score=147.58 Aligned_cols=171 Identities=20% Similarity=0.247 Sum_probs=124.6
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCC-CCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc---
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLH-NSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS--- 79 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~--- 79 (335)
+|+||||||+|+||+++++.|+++|++|+++.++. .........+... +.++.++.+|++|.+++.+++++
T Consensus 2 ~k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~Dl~~~~~~~~~~~~~~~ 76 (248)
T PRK06947 2 RKVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAA-----GGRACVVAGDVANEADVIAMFDAVQS 76 (248)
T ss_pred CcEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc-----CCcEEEEEeccCCHHHHHHHHHHHHH
Confidence 68999999999999999999999999988765433 2222222333221 24688999999999988877763
Q ss_pred --CCCCEEEEcccccch-----hhhhcChHHHHHHhHHHHHHHHHHHHHc-C------CCEEEEeccccc-cCCCCCCCc
Q 019795 80 --QKFEAVIHFGALKAV-----AESVQHPFRYFDNNLIGTINLYQAMAKY-N------CKKLVFSSSATI-YGQPEKIPC 144 (335)
Q Consensus 80 --~~~d~vi~~a~~~~~-----~~~~~~~~~~~~~nv~~~~~l~~~~~~~-~------~~~~v~~Ss~~v-yg~~~~~~~ 144 (335)
..+|+|||+|+.... ....++++..+++|+.++..+++++.+. . -.++|++||... ++..
T Consensus 77 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~----- 151 (248)
T PRK06947 77 AFGRLDALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASRLGSP----- 151 (248)
T ss_pred hcCCCCEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhcCCCC-----
Confidence 369999999996421 2233455678999999999988764432 1 236999998653 3311
Q ss_pred cCCCCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 145 VEDFPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 145 ~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
.....|+.+|...+.+++.++.+. .+++++++||+.+..+
T Consensus 152 ------~~~~~Y~~sK~~~~~~~~~la~~~~~~~i~v~~i~Pg~v~t~ 193 (248)
T PRK06947 152 ------NEYVDYAGSKGAVDTLTLGLAKELGPHGVRVNAVRPGLIETE 193 (248)
T ss_pred ------CCCcccHhhHHHHHHHHHHHHHHhhhhCcEEEEEeccCcccc
Confidence 112469999999999998887764 2799999999998765
|
|
| >PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=4.7e-18 Score=148.80 Aligned_cols=173 Identities=12% Similarity=0.067 Sum_probs=125.6
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCC-CchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc-
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHN-SVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~- 79 (335)
+++|++|||||+++||+++++.|++.|++|+++.|+.. ........+.... +.++.++.+|++|++++.++++.
T Consensus 6 l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~ 81 (260)
T PRK08416 6 MKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKY----GIKAKAYPLNILEPETYKELFKKI 81 (260)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhc----CCceEEEEcCCCCHHHHHHHHHHH
Confidence 45689999999999999999999999999988866432 2222222222111 24678999999999999888875
Q ss_pred ----CCCCEEEEcccccc----------hhhhhcChHHHHHHhHHHHHHHHHHHHH----cCCCEEEEeccccccCCCCC
Q 019795 80 ----QKFEAVIHFGALKA----------VAESVQHPFRYFDNNLIGTINLYQAMAK----YNCKKLVFSSSATIYGQPEK 141 (335)
Q Consensus 80 ----~~~d~vi~~a~~~~----------~~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~v~~Ss~~vyg~~~~ 141 (335)
.++|++||+|+... ...+.+.+...+++|+.++..+++.+.. .+.++||++||....-
T Consensus 82 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~---- 157 (260)
T PRK08416 82 DEDFDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVGGGSIISLSSTGNLV---- 157 (260)
T ss_pred HHhcCCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccCCEEEEEEecccccc----
Confidence 37899999997521 1112345567888999988887776543 3346899999964321
Q ss_pred CCccCCCCCCCCChhHHhHHHHHHHHHHHHhhCC--CCeEEEEecccccC
Q 019795 142 IPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKADP--EWRIILLRYFNPVG 189 (335)
Q Consensus 142 ~~~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~--~~~~~~lR~~~v~G 189 (335)
+......|+.+|...+.+++.++.++. ++++.++.|+.+-.
T Consensus 158 -------~~~~~~~Y~asK~a~~~~~~~la~el~~~gi~v~~v~PG~i~T 200 (260)
T PRK08416 158 -------YIENYAGHGTSKAAVETMVKYAATELGEKNIRVNAVSGGPIDT 200 (260)
T ss_pred -------CCCCcccchhhHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccC
Confidence 122345799999999999999888752 78999999987633
|
|
| >PRK05872 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=5.6e-18 Score=151.06 Aligned_cols=172 Identities=17% Similarity=0.116 Sum_probs=130.4
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
+++|++|||||+|+||.++++.|++.|++|++++|+........+.+.. ...+..+.+|++|.+++.+++++
T Consensus 7 l~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~------~~~~~~~~~Dv~d~~~v~~~~~~~~ 80 (296)
T PRK05872 7 LAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGG------DDRVLTVVADVTDLAAMQAAAEEAV 80 (296)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcC------CCcEEEEEecCCCHHHHHHHHHHHH
Confidence 3568999999999999999999999999999999875544333333211 13566677999999998887764
Q ss_pred ---CCCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHHHHc---CCCEEEEeccccccCCCCCCCccCCCC
Q 019795 80 ---QKFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAMAKY---NCKKLVFSSSATIYGQPEKIPCVEDFP 149 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~~v~~Ss~~vyg~~~~~~~~e~~~ 149 (335)
..+|+|||+||.... ..+.++++.++++|+.++.++++++... +.++||++||...+. +
T Consensus 81 ~~~g~id~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~-----------~ 149 (296)
T PRK05872 81 ERFGGIDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIERRGYVLQVSSLAAFA-----------A 149 (296)
T ss_pred HHcCCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHhhcC-----------C
Confidence 479999999997432 1234556788999999999999987542 235899999976552 2
Q ss_pred CCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 150 YGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 150 ~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
......|+.+|...+.+++.++.+. .++.+.++.|+.+..+
T Consensus 150 ~~~~~~Y~asKaal~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~ 192 (296)
T PRK05872 150 APGMAAYCASKAGVEAFANALRLEVAHHGVTVGSAYLSWIDTD 192 (296)
T ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHHHCcEEEEEecCcccch
Confidence 2334679999999999998876542 2789999999887554
|
|
| >PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=7.7e-18 Score=145.09 Aligned_cols=162 Identities=19% Similarity=0.163 Sum_probs=124.3
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc-C
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-Q 80 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-~ 80 (335)
+++|+++||||+|+||+++++.|+++|++|++++|+..... ..++.++.+|++++ +.++++. .
T Consensus 3 l~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~--------------~~~~~~~~~D~~~~--~~~~~~~~~ 66 (235)
T PRK06550 3 FMTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPDL--------------SGNFHFLQLDLSDD--LEPLFDWVP 66 (235)
T ss_pred CCCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCccccc--------------CCcEEEEECChHHH--HHHHHHhhC
Confidence 45689999999999999999999999999999988643211 14578899999987 4444443 3
Q ss_pred CCCEEEEcccccc-----hhhhhcChHHHHHHhHHHHHHHHHHHHH----cCCCEEEEeccccccCCCCCCCccCCCCCC
Q 019795 81 KFEAVIHFGALKA-----VAESVQHPFRYFDNNLIGTINLYQAMAK----YNCKKLVFSSSATIYGQPEKIPCVEDFPYG 151 (335)
Q Consensus 81 ~~d~vi~~a~~~~-----~~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~ 151 (335)
++|+|||+|+... ...+.++++..+++|+.++.++++++.. .+.+++|++||...+. +..
T Consensus 67 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~-----------~~~ 135 (235)
T PRK06550 67 SVDILCNTAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIIINMCSIASFV-----------AGG 135 (235)
T ss_pred CCCEEEECCCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhcc-----------CCC
Confidence 7999999998531 1223456678899999999999998753 3446899999966542 122
Q ss_pred CCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 152 AMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 152 ~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
....|+.+|...+.+++.++.++ .++++.+++|+.+.++
T Consensus 136 ~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~pg~v~t~ 176 (235)
T PRK06550 136 GGAAYTASKHALAGFTKQLALDYAKDGIQVFGIAPGAVKTP 176 (235)
T ss_pred CCcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCccCc
Confidence 34579999999999988877764 2799999999998776
|
|
| >PRK08936 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.6e-17 Score=145.42 Aligned_cols=173 Identities=14% Similarity=0.142 Sum_probs=128.1
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCc-hhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc-
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSV-PEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~- 79 (335)
+++|+++||||+|+||+++++.|+++|+.|+++.|+.... ....+.+... ..++.++.+|++|.+++.++++.
T Consensus 5 ~~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~-----~~~~~~~~~Dl~~~~~i~~~~~~~ 79 (261)
T PRK08936 5 LEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKA-----GGEAIAVKGDVTVESDVVNLIQTA 79 (261)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHc-----CCeEEEEEecCCCHHHHHHHHHHH
Confidence 4679999999999999999999999999999888754322 2222233221 14677899999999998887764
Q ss_pred ----CCCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHH----HHcC-CCEEEEeccccccCCCCCCCccC
Q 019795 80 ----QKFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAM----AKYN-CKKLVFSSSATIYGQPEKIPCVE 146 (335)
Q Consensus 80 ----~~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~----~~~~-~~~~v~~Ss~~vyg~~~~~~~~e 146 (335)
..+|++||+|+.... ..+.+.++..+++|+.++..+++++ ++.+ .+++|++||...+
T Consensus 80 ~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~~~~---------- 149 (261)
T PRK08936 80 VKEFGTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVHEQ---------- 149 (261)
T ss_pred HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccc----------
Confidence 368999999997432 2234566688999999988776654 4433 3589999996433
Q ss_pred CCCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 147 DFPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 147 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
.+..+...|+.+|.+.+.+++.++.+. .++++.+++|+.+..+
T Consensus 150 -~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~ 194 (261)
T PRK08936 150 -IPWPLFVHYAASKGGVKLMTETLAMEYAPKGIRVNNIGPGAINTP 194 (261)
T ss_pred -CCCCCCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECcCCCC
Confidence 234455689999998888888776553 3799999999988765
|
|
| >PRK07041 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=5.5e-18 Score=145.54 Aligned_cols=166 Identities=17% Similarity=0.137 Sum_probs=129.8
Q ss_pred EEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcC-CCCEEE
Q 019795 8 LVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQ-KFEAVI 86 (335)
Q Consensus 8 lItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~-~~d~vi 86 (335)
|||||+|+||+++++.|+++|++|++++|+..........+.. ..++.++.+|++|++++.++++.. .+|++|
T Consensus 1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~------~~~~~~~~~Dl~~~~~~~~~~~~~~~id~li 74 (230)
T PRK07041 1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGG------GAPVRTAALDITDEAAVDAFFAEAGPFDHVV 74 (230)
T ss_pred CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc------CCceEEEEccCCCHHHHHHHHHhcCCCCEEE
Confidence 6999999999999999999999999999875433322222210 146788999999999999999853 589999
Q ss_pred Ecccccch----hhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccCCCCCCCccCCCCCCCCChhHHhHHH
Q 019795 87 HFGALKAV----AESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQW 162 (335)
Q Consensus 87 ~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~Y~~sK~~ 162 (335)
|+++.... ..+.++++.++++|+.++.+++++....+.+++|++||...+. +..+...|+.+|..
T Consensus 75 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~g~iv~~ss~~~~~-----------~~~~~~~Y~~sK~a 143 (230)
T PRK07041 75 ITAADTPGGPVRALPLAAAQAAMDSKFWGAYRVARAARIAPGGSLTFVSGFAAVR-----------PSASGVLQGAINAA 143 (230)
T ss_pred ECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHhhhhhcCCeEEEEECchhhcC-----------CCCcchHHHHHHHH
Confidence 99987432 1234567789999999999999966555567999999987663 23445689999999
Q ss_pred HHHHHHHHHhhCCCCeEEEEecccccCC
Q 019795 163 CEEIAFDVQKADPEWRIILLRYFNPVGA 190 (335)
Q Consensus 163 ~E~~~~~~~~~~~~~~~~~lR~~~v~G~ 190 (335)
.+.+++.++.+..++++.+++|+.+-.+
T Consensus 144 ~~~~~~~la~e~~~irv~~i~pg~~~t~ 171 (230)
T PRK07041 144 LEALARGLALELAPVRVNTVSPGLVDTP 171 (230)
T ss_pred HHHHHHHHHHHhhCceEEEEeecccccH
Confidence 9999999888866788889999877543
|
|
| >PRK07069 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.6e-17 Score=144.50 Aligned_cols=171 Identities=14% Similarity=0.116 Sum_probs=125.0
Q ss_pred eEEEEcCCChhhHHHHHHHHhCCCeEEEEecC-CCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc-----
Q 019795 6 NILVTGGAGFIGTHCALQLLQGGFKVVLIDNL-HNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS----- 79 (335)
Q Consensus 6 ~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~----- 79 (335)
+++||||+|+||+++++.|+++|++|++++|+ ........+.+..... ...+..+.+|++|.+++.++++.
T Consensus 1 ~ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 77 (251)
T PRK07069 1 RAFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHG---EGVAFAAVQDVTDEAQWQALLAQAADAM 77 (251)
T ss_pred CEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCC---CceEEEEEeecCCHHHHHHHHHHHHHHc
Confidence 48999999999999999999999999999987 3333333333322111 12345688999999998887764
Q ss_pred CCCCEEEEcccccch----hhhhcChHHHHHHhHH----HHHHHHHHHHHcCCCEEEEeccccccCCCCCCCccCCCCCC
Q 019795 80 QKFEAVIHFGALKAV----AESVQHPFRYFDNNLI----GTINLYQAMAKYNCKKLVFSSSATIYGQPEKIPCVEDFPYG 151 (335)
Q Consensus 80 ~~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~----~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~ 151 (335)
.++|+|||+|+.... ..+.++.+..+++|+. ++..++.++++.+.+++|++||...+.. ..
T Consensus 78 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~ss~~~~~~-----------~~ 146 (251)
T PRK07069 78 GGLSVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQPASIVNISSVAAFKA-----------EP 146 (251)
T ss_pred CCccEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEecChhhccC-----------CC
Confidence 368999999997432 1233455678889998 5555666666666679999999776532 22
Q ss_pred CCChhHHhHHHHHHHHHHHHhhC----CCCeEEEEecccccCC
Q 019795 152 AMNPYGRTKQWCEEIAFDVQKAD----PEWRIILLRYFNPVGA 190 (335)
Q Consensus 152 ~~~~Y~~sK~~~E~~~~~~~~~~----~~~~~~~lR~~~v~G~ 190 (335)
....|+.+|...+.+++.++.+. .++++..++|+.+.++
T Consensus 147 ~~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~pg~v~t~ 189 (251)
T PRK07069 147 DYTAYNASKAAVASLTKSIALDCARRGLDVRCNSIHPTFIRTG 189 (251)
T ss_pred CCchhHHHHHHHHHHHHHHHHHhcccCCcEEEEEEeecccCCc
Confidence 34579999999999998877652 2478899999988776
|
|
| >TIGR02415 23BDH acetoin reductases | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.2e-17 Score=145.67 Aligned_cols=170 Identities=18% Similarity=0.150 Sum_probs=127.3
Q ss_pred CeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc-----
Q 019795 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS----- 79 (335)
Q Consensus 5 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~----- 79 (335)
|+++|||++|+||.++++.|++.|++|++++|+..........+.+. ...+.++.+|++|++++.++++.
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~-----~~~~~~~~~Dl~~~~~i~~~~~~~~~~~ 75 (254)
T TIGR02415 1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQA-----GGKAVAYKLDVSDKDQVFSAIDQAAEKF 75 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-----CCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 68999999999999999999999999999998754433333333221 14678899999999998887664
Q ss_pred CCCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHHHH----cC-CCEEEEeccccccCCCCCCCccCCCCC
Q 019795 80 QKFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAMAK----YN-CKKLVFSSSATIYGQPEKIPCVEDFPY 150 (335)
Q Consensus 80 ~~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~-~~~~v~~Ss~~vyg~~~~~~~~e~~~~ 150 (335)
..+|+|||+|+.... ..+.+.++..+++|+.++..+++++.. .+ .+++|++||..... +.
T Consensus 76 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~-----------~~ 144 (254)
T TIGR02415 76 GGFDVMVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASIAGHE-----------GN 144 (254)
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecchhhcC-----------CC
Confidence 368999999987422 223456668899999999988877643 22 25899999855321 12
Q ss_pred CCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 151 GAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 151 ~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
.....|+.+|...+.+++.++.+. .++.+.+++|+.+..+
T Consensus 145 ~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~i~t~ 186 (254)
T TIGR02415 145 PILSAYSSTKFAVRGLTQTAAQELAPKGITVNAYCPGIVKTP 186 (254)
T ss_pred CCCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCh
Confidence 235679999999999998877664 2688999999877544
|
One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733). |
| >PRK07832 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.8e-17 Score=146.14 Aligned_cols=171 Identities=20% Similarity=0.182 Sum_probs=126.7
Q ss_pred CeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc-----
Q 019795 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS----- 79 (335)
Q Consensus 5 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~----- 79 (335)
|+++||||+|+||+++++.|+++|++|++++|+........+.+..... ..+.++.+|++|++++.++++.
T Consensus 1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~~~~ 76 (272)
T PRK07832 1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGG----TVPEHRALDISDYDAVAAFAADIHAAH 76 (272)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC----CcceEEEeeCCCHHHHHHHHHHHHHhc
Confidence 5899999999999999999999999999999875544333333332211 2355678999999988877764
Q ss_pred CCCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHHHH----c-CCCEEEEeccccccCCCCCCCccCCCCC
Q 019795 80 QKFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAMAK----Y-NCKKLVFSSSATIYGQPEKIPCVEDFPY 150 (335)
Q Consensus 80 ~~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~----~-~~~~~v~~Ss~~vyg~~~~~~~~e~~~~ 150 (335)
.++|+|||+||.... ..+.++++..+++|+.++.++++++.. . ..+++|++||...+. +.
T Consensus 77 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~-----------~~ 145 (272)
T PRK07832 77 GSMDVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAGLV-----------AL 145 (272)
T ss_pred CCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccccccC-----------CC
Confidence 368999999986421 224456678899999999999998643 2 235899999965321 12
Q ss_pred CCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 151 GAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 151 ~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
.....|+.+|...+.+.+..+.+. .++++++++|+.+.++
T Consensus 146 ~~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v~t~ 187 (272)
T PRK07832 146 PWHAAYSASKFGLRGLSEVLRFDLARHGIGVSVVVPGAVKTP 187 (272)
T ss_pred CCCcchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCc
Confidence 234579999998888877666442 3899999999988765
|
|
| >PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=2e-17 Score=142.81 Aligned_cols=171 Identities=13% Similarity=0.120 Sum_probs=128.2
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc---
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS--- 79 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~--- 79 (335)
++++|+||||+|+||+++++.|++.|++|++++|++.........+... ..+.++.+|+++++++.++++.
T Consensus 4 ~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~------~~~~~~~~Dl~~~~~~~~~~~~~~~ 77 (238)
T PRK05786 4 KGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKY------GNIHYVVGDVSSTESARNVIEKAAK 77 (238)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc------CCeEEEECCCCCHHHHHHHHHHHHH
Confidence 5789999999999999999999999999999999754433322222211 3578899999999988877663
Q ss_pred --CCCCEEEEcccccc--hhhhhcChHHHHHHhHHHHHHHHHHHHHc--CCCEEEEeccccc-cCCCCCCCccCCCCCCC
Q 019795 80 --QKFEAVIHFGALKA--VAESVQHPFRYFDNNLIGTINLYQAMAKY--NCKKLVFSSSATI-YGQPEKIPCVEDFPYGA 152 (335)
Q Consensus 80 --~~~d~vi~~a~~~~--~~~~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~v~~Ss~~v-yg~~~~~~~~e~~~~~~ 152 (335)
.++|.+||+++... .....+..+..+++|+.++..+++.+... ...++|++||... ++ +..+
T Consensus 78 ~~~~id~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~-----------~~~~ 146 (238)
T PRK05786 78 VLNAIDGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSMSGIYK-----------ASPD 146 (238)
T ss_pred HhCCCCEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecchhccc-----------CCCC
Confidence 25799999987532 11222455678899999999998887653 2257999988643 21 2234
Q ss_pred CChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 153 MNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 153 ~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
...|+.+|...+.+++.++.+. ++++++++||+.++++
T Consensus 147 ~~~Y~~sK~~~~~~~~~~~~~~~~~gi~v~~i~pg~v~~~ 186 (238)
T PRK05786 147 QLSYAVAKAGLAKAVEILASELLGRGIRVNGIAPTTISGD 186 (238)
T ss_pred chHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCC
Confidence 4579999999998888777653 3899999999999986
|
|
| >PRK08594 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=2.8e-17 Score=143.55 Aligned_cols=173 Identities=14% Similarity=0.017 Sum_probs=127.2
Q ss_pred CCCeEEEEcCC--ChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc-
Q 019795 3 SEKNILVTGGA--GFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS- 79 (335)
Q Consensus 3 ~~~~vlItGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~- 79 (335)
++|+++||||+ +.||++++++|+++|++|++++|+... .+..+++.+... ..++.++.+|++|++++.++++.
T Consensus 6 ~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~-~~~~~~~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~ 81 (257)
T PRK08594 6 EGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERL-EKEVRELADTLE---GQESLLLPCDVTSDEEITACFETI 81 (257)
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccc-hHHHHHHHHHcC---CCceEEEecCCCCHHHHHHHHHHH
Confidence 45899999997 899999999999999999998875322 222222322111 14677899999999998887764
Q ss_pred ----CCCCEEEEcccccc--------hhhhhcChHHHHHHhHHHHHHHHHHHHHc--CCCEEEEeccccccCCCCCCCcc
Q 019795 80 ----QKFEAVIHFGALKA--------VAESVQHPFRYFDNNLIGTINLYQAMAKY--NCKKLVFSSSATIYGQPEKIPCV 145 (335)
Q Consensus 80 ----~~~d~vi~~a~~~~--------~~~~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~v~~Ss~~vyg~~~~~~~~ 145 (335)
.++|++||||+... ...+.+.+...+++|+.++..+++++... ...+||++||....
T Consensus 82 ~~~~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~--------- 152 (257)
T PRK08594 82 KEEVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEGGSIVTLTYLGGE--------- 152 (257)
T ss_pred HHhCCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccCceEEEEcccCCc---------
Confidence 47999999998642 11233455678899999999988886643 22589999986532
Q ss_pred CCCCCCCCChhHHhHHHHHHHHHHHHhhCC--CCeEEEEecccccCC
Q 019795 146 EDFPYGAMNPYGRTKQWCEEIAFDVQKADP--EWRIILLRYFNPVGA 190 (335)
Q Consensus 146 e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~--~~~~~~lR~~~v~G~ 190 (335)
.+......|+.+|...+.+++.++.++. ++++.++.|+.+-.+
T Consensus 153 --~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~ 197 (257)
T PRK08594 153 --RVVQNYNVMGVAKASLEASVKYLANDLGKDGIRVNAISAGPIRTL 197 (257)
T ss_pred --cCCCCCchhHHHHHHHHHHHHHHHHHhhhcCCEEeeeecCcccCH
Confidence 1222345799999999999999887652 789999999877543
|
|
| >PRK09072 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=2.2e-17 Score=144.80 Aligned_cols=170 Identities=16% Similarity=0.193 Sum_probs=127.6
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc---
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS--- 79 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~--- 79 (335)
++++++||||+|+||+++++.|+++|++|++++|+..........+. .+.++.++.+|++|.+++.++++.
T Consensus 4 ~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~------~~~~~~~~~~D~~d~~~~~~~~~~~~~ 77 (263)
T PRK09072 4 KDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLP------YPGRHRWVVADLTSEAGREAVLARARE 77 (263)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHh------cCCceEEEEccCCCHHHHHHHHHHHHh
Confidence 46899999999999999999999999999999997554433333321 125788999999999988877663
Q ss_pred -CCCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHHHH----cCCCEEEEeccccccCCCCCCCccCCCCC
Q 019795 80 -QKFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAMAK----YNCKKLVFSSSATIYGQPEKIPCVEDFPY 150 (335)
Q Consensus 80 -~~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~ 150 (335)
..+|+|||+||.... ..+.+.....+++|+.++.++++.+.. .+.+++|++||...+. +.
T Consensus 78 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~-----------~~ 146 (263)
T PRK09072 78 MGGINVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSAMVVNVGSTFGSI-----------GY 146 (263)
T ss_pred cCCCCEEEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEecChhhCc-----------CC
Confidence 368999999987432 123345567899999999999998754 2346889988854321 12
Q ss_pred CCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccC
Q 019795 151 GAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVG 189 (335)
Q Consensus 151 ~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G 189 (335)
.....|+.+|...+.+++.++.++ .++.++++.|+.+..
T Consensus 147 ~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~~~t 187 (263)
T PRK09072 147 PGYASYCASKFALRGFSEALRRELADTGVRVLYLAPRATRT 187 (263)
T ss_pred CCccHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccc
Confidence 234579999999999988888764 267888888876644
|
|
| >TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.77 E-value=2.3e-17 Score=142.62 Aligned_cols=170 Identities=14% Similarity=0.109 Sum_probs=124.7
Q ss_pred CeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCC-CchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc----
Q 019795 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHN-SVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS---- 79 (335)
Q Consensus 5 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~---- 79 (335)
|++|||||+|+||+++++.|+++|++|+++.|... ........+... ..++.++.+|++|++++.++++.
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~ 75 (242)
T TIGR01829 1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGAL-----GFDFRVVEGDVSSFESCKAAVAKVEAE 75 (242)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhh-----CCceEEEEecCCCHHHHHHHHHHHHHH
Confidence 68999999999999999999999999999887322 111111111111 14688999999999988877763
Q ss_pred -CCCCEEEEcccccc----hhhhhcChHHHHHHhHHHHHHHHHHH----HHcCCCEEEEeccccccCCCCCCCccCCCCC
Q 019795 80 -QKFEAVIHFGALKA----VAESVQHPFRYFDNNLIGTINLYQAM----AKYNCKKLVFSSSATIYGQPEKIPCVEDFPY 150 (335)
Q Consensus 80 -~~~d~vi~~a~~~~----~~~~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~ 150 (335)
..+|+|||+|+... ...+.+.++..+++|+.++..+++++ ++.+.+++|++||..... +.
T Consensus 76 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~-----------~~ 144 (242)
T TIGR01829 76 LGPIDVLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERGWGRIINISSVNGQK-----------GQ 144 (242)
T ss_pred cCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcC-----------CC
Confidence 36899999998642 22234566778999999988876664 445667999999954321 12
Q ss_pred CCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 151 GAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 151 ~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
.....|+.+|...+.+++.++.+. .++.+..++|+.+.++
T Consensus 145 ~~~~~y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~ 186 (242)
T TIGR01829 145 FGQTNYSAAKAGMIGFTKALAQEGATKGVTVNTISPGYIATD 186 (242)
T ss_pred CCcchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCCCcCc
Confidence 234579999999998888776653 3899999999988765
|
(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. |
| >PRK07984 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=2.9e-17 Score=143.70 Aligned_cols=172 Identities=17% Similarity=0.057 Sum_probs=126.8
Q ss_pred CCCCCeEEEEcCCC--hhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHh
Q 019795 1 MASEKNILVTGGAG--FIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFS 78 (335)
Q Consensus 1 ~~~~~~vlItGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~ 78 (335)
|+++|+++||||++ .||+++++.|+++|++|++++|+. ......+.+.... +....+.+|++|+++++++++
T Consensus 3 ~l~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~-~~~~~~~~~~~~~-----~~~~~~~~Dl~~~~~v~~~~~ 76 (262)
T PRK07984 3 FLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND-KLKGRVEEFAAQL-----GSDIVLPCDVAEDASIDAMFA 76 (262)
T ss_pred ccCCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecch-hHHHHHHHHHhcc-----CCceEeecCCCCHHHHHHHHH
Confidence 46679999999985 999999999999999999888862 2223333333211 245678899999999998876
Q ss_pred c-----CCCCEEEEcccccch---------hhhhcChHHHHHHhHHHHHHHHHHHHHc--CCCEEEEeccccccCCCCCC
Q 019795 79 S-----QKFEAVIHFGALKAV---------AESVQHPFRYFDNNLIGTINLYQAMAKY--NCKKLVFSSSATIYGQPEKI 142 (335)
Q Consensus 79 ~-----~~~d~vi~~a~~~~~---------~~~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~v~~Ss~~vyg~~~~~ 142 (335)
. .++|++||+||.... ..+.+.++..+++|+.++..+.+++... .-.++|++||....
T Consensus 77 ~~~~~~g~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~iss~~~~------ 150 (262)
T PRK07984 77 ELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAE------ 150 (262)
T ss_pred HHHhhcCCCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcCCcEEEEEecCCCC------
Confidence 4 368999999996421 1133456678899999999998886542 22589999886532
Q ss_pred CccCCCCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccC
Q 019795 143 PCVEDFPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVG 189 (335)
Q Consensus 143 ~~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G 189 (335)
.+......|+.||...+.+++.++.+. .++++.++.|+.+--
T Consensus 151 -----~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T 194 (262)
T PRK07984 151 -----RAIPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRT 194 (262)
T ss_pred -----CCCCCcchhHHHHHHHHHHHHHHHHHhcccCcEEeeeecCcccc
Confidence 122234579999999999999988874 278899999987643
|
|
| >PRK07791 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.6e-17 Score=147.42 Aligned_cols=168 Identities=15% Similarity=0.103 Sum_probs=125.6
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCC---------CCchhhHHhhhhhcCCccccceeEEEccCCCHHH
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLH---------NSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDD 72 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~---------~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~ 72 (335)
+++|++|||||+++||+++++.|++.|++|++++++. .......+.+... ...+.++.+|++|+++
T Consensus 4 l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~-----~~~~~~~~~Dv~~~~~ 78 (286)
T PRK07791 4 LDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAA-----GGEAVANGDDIADWDG 78 (286)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhc-----CCceEEEeCCCCCHHH
Confidence 5679999999999999999999999999999988764 2222222222211 1457789999999998
Q ss_pred HHHHHhc-----CCCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHHHH----cC------CCEEEEeccc
Q 019795 73 LDKLFSS-----QKFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAMAK----YN------CKKLVFSSSA 133 (335)
Q Consensus 73 ~~~~~~~-----~~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~------~~~~v~~Ss~ 133 (335)
+.++++. .++|++||+||.... ..+.++++..+++|+.++..+++++.. .. ..+||++||.
T Consensus 79 v~~~~~~~~~~~g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~isS~ 158 (286)
T PRK07791 79 AANLVDAAVETFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSG 158 (286)
T ss_pred HHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEEeCch
Confidence 8877764 479999999997421 223456778999999999999888642 11 1489999996
Q ss_pred cccCCCCCCCccCCCCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecc
Q 019795 134 TIYGQPEKIPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYF 185 (335)
Q Consensus 134 ~vyg~~~~~~~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~ 185 (335)
.... +......|+.+|...+.+++.++.+. .++++..+.|+
T Consensus 159 ~~~~-----------~~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~Pg 201 (286)
T PRK07791 159 AGLQ-----------GSVGQGNYSAAKAGIAALTLVAAAELGRYGVTVNAIAPA 201 (286)
T ss_pred hhCc-----------CCCCchhhHHHHHHHHHHHHHHHHHHHHhCeEEEEECCC
Confidence 5431 22234579999999999999887763 27899999886
|
|
| >PRK08177 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.6e-17 Score=142.24 Aligned_cols=169 Identities=18% Similarity=0.182 Sum_probs=125.9
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc---C
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS---Q 80 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~---~ 80 (335)
||+|+||||+|+||+++++.|+++|++|++++|++...... ... .++.++.+|++|.++++++++. .
T Consensus 1 ~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~----~~~------~~~~~~~~D~~d~~~~~~~~~~~~~~ 70 (225)
T PRK08177 1 KRTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTAL----QAL------PGVHIEKLDMNDPASLDQLLQRLQGQ 70 (225)
T ss_pred CCEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHH----Hhc------cccceEEcCCCCHHHHHHHHHHhhcC
Confidence 57999999999999999999999999999999986553322 111 3567788999999988887774 3
Q ss_pred CCCEEEEcccccch------hhhhcChHHHHHHhHHHHHHHHHHHHHc---CCCEEEEeccccccCCCCCCCccCCCCCC
Q 019795 81 KFEAVIHFGALKAV------AESVQHPFRYFDNNLIGTINLYQAMAKY---NCKKLVFSSSATIYGQPEKIPCVEDFPYG 151 (335)
Q Consensus 81 ~~d~vi~~a~~~~~------~~~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~ 151 (335)
++|+|||+|+.... ..+.+++...+++|+.++..+++++... +...++++||. +|.... .+..
T Consensus 71 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~ss~--~g~~~~------~~~~ 142 (225)
T PRK08177 71 RFDLLFVNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPGQGVLAFMSSQ--LGSVEL------PDGG 142 (225)
T ss_pred CCCEEEEcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhcCCEEEEEccC--cccccc------CCCC
Confidence 69999999987421 1123455678899999999999987643 23578888874 322111 1222
Q ss_pred CCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 152 AMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 152 ~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
+...|+.+|...+.+++.++.++ +++.+..++|+.+-.+
T Consensus 143 ~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~i~PG~i~t~ 183 (225)
T PRK08177 143 EMPLYKASKAALNSMTRSFVAELGEPTLTVLSMHPGWVKTD 183 (225)
T ss_pred CccchHHHHHHHHHHHHHHHHHhhcCCeEEEEEcCCceecC
Confidence 34479999999999999888764 3688999999987544
|
|
| >PRK08340 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.8e-17 Score=145.07 Aligned_cols=169 Identities=20% Similarity=0.162 Sum_probs=125.4
Q ss_pred CeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc-----
Q 019795 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS----- 79 (335)
Q Consensus 5 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~----- 79 (335)
|+++||||+|+||++++++|+++|++|++++|++.......+++.+. .++.++.+|++|+++++++++.
T Consensus 1 m~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~------~~~~~~~~Dv~d~~~~~~~~~~~~~~~ 74 (259)
T PRK08340 1 MNVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEY------GEVYAVKADLSDKDDLKNLVKEAWELL 74 (259)
T ss_pred CeEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc------CCceEEEcCCCCHHHHHHHHHHHHHhc
Confidence 48999999999999999999999999999998765544444444321 3577899999999999888764
Q ss_pred CCCCEEEEcccccch------hhhhcChHHHHHHhHHHHHHHHHHH----H-HcCCCEEEEeccccccCCCCCCCccCCC
Q 019795 80 QKFEAVIHFGALKAV------AESVQHPFRYFDNNLIGTINLYQAM----A-KYNCKKLVFSSSATIYGQPEKIPCVEDF 148 (335)
Q Consensus 80 ~~~d~vi~~a~~~~~------~~~~~~~~~~~~~nv~~~~~l~~~~----~-~~~~~~~v~~Ss~~vyg~~~~~~~~e~~ 148 (335)
.++|+|||+||.... ....+++...+.+|+.++..+.+.+ . +.+.++||++||.....
T Consensus 75 g~id~li~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~isS~~~~~----------- 143 (259)
T PRK08340 75 GGIDALVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVYLSSVSVKE----------- 143 (259)
T ss_pred CCCCEEEECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEEEeCcccCC-----------
Confidence 479999999996321 1123345566788988877665543 2 22346899999976541
Q ss_pred CCCCCChhHHhHHHHHHHHHHHHhhCC--CCeEEEEecccccCC
Q 019795 149 PYGAMNPYGRTKQWCEEIAFDVQKADP--EWRIILLRYFNPVGA 190 (335)
Q Consensus 149 ~~~~~~~Y~~sK~~~E~~~~~~~~~~~--~~~~~~lR~~~v~G~ 190 (335)
+..+...|+.+|...+.+++.++.++. ++.+..+.|+.+-.+
T Consensus 144 ~~~~~~~y~~sKaa~~~~~~~la~e~~~~gI~v~~v~pG~v~t~ 187 (259)
T PRK08340 144 PMPPLVLADVTRAGLVQLAKGVSRTYGGKGIRAYTVLLGSFDTP 187 (259)
T ss_pred CCCCchHHHHHHHHHHHHHHHHHHHhCCCCEEEEEeccCcccCc
Confidence 233456899999999999999888752 688888888776443
|
|
| >PRK08415 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=2.5e-17 Score=145.15 Aligned_cols=171 Identities=15% Similarity=0.037 Sum_probs=126.8
Q ss_pred CCCCeEEEEcCC--ChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc
Q 019795 2 ASEKNILVTGGA--GFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS 79 (335)
Q Consensus 2 ~~~~~vlItGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~ 79 (335)
|++|+++||||+ +.||+++++.|+++|++|++++|+.. ..+..+.+.+..+ .. .++.+|++|.+++.++++.
T Consensus 3 l~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~-~~~~~~~~~~~~~----~~-~~~~~Dv~d~~~v~~~~~~ 76 (274)
T PRK08415 3 MKGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEA-LKKRVEPIAQELG----SD-YVYELDVSKPEHFKSLAES 76 (274)
T ss_pred cCCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHH-HHHHHHHHHHhcC----Cc-eEEEecCCCHHHHHHHHHH
Confidence 457999999997 79999999999999999999988632 1222232322111 23 5789999999998887764
Q ss_pred -----CCCCEEEEcccccc--------hhhhhcChHHHHHHhHHHHHHHHHHHHHc--CCCEEEEeccccccCCCCCCCc
Q 019795 80 -----QKFEAVIHFGALKA--------VAESVQHPFRYFDNNLIGTINLYQAMAKY--NCKKLVFSSSATIYGQPEKIPC 144 (335)
Q Consensus 80 -----~~~d~vi~~a~~~~--------~~~~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~v~~Ss~~vyg~~~~~~~ 144 (335)
.++|++||+||... ...+.++++..+++|+.++..+++++... .-++||++||.+.. .
T Consensus 77 i~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS~~~~--~----- 149 (274)
T PRK08415 77 LKKDLGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGASVLTLSYLGGV--K----- 149 (274)
T ss_pred HHHHcCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCCcEEEEecCCCc--c-----
Confidence 47999999999742 12234567789999999999999986643 22589999985432 1
Q ss_pred cCCCCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccC
Q 019795 145 VEDFPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVG 189 (335)
Q Consensus 145 ~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G 189 (335)
+......|+.||...+.+++.++.+. .++++.++.|+.|..
T Consensus 150 ----~~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T 192 (274)
T PRK08415 150 ----YVPHYNVMGVAKAALESSVRYLAVDLGKKGIRVNAISAGPIKT 192 (274)
T ss_pred ----CCCcchhhhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccc
Confidence 12234579999999999999988774 278899999987754
|
|
| >PRK06940 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=2.1e-17 Score=145.75 Aligned_cols=178 Identities=16% Similarity=0.144 Sum_probs=127.3
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc---
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS--- 79 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~--- 79 (335)
|+|+++|||+ |+||+++++.|. +|++|++++|+..+.....+.+... ..++.++.+|++|++++.++++.
T Consensus 1 ~~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~-----~~~~~~~~~Dv~d~~~i~~~~~~~~~ 73 (275)
T PRK06940 1 MKEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREA-----GFDVSTQEVDVSSRESVKALAATAQT 73 (275)
T ss_pred CCCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhc-----CCeEEEEEeecCCHHHHHHHHHHHHh
Confidence 4678999998 799999999996 7999999999765444333333321 14678899999999999888764
Q ss_pred -CCCCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHc--CCCEEEEeccccccCCCC-----C---CCccCCC
Q 019795 80 -QKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKY--NCKKLVFSSSATIYGQPE-----K---IPCVEDF 148 (335)
Q Consensus 80 -~~~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~v~~Ss~~vyg~~~-----~---~~~~e~~ 148 (335)
.++|++||+||... ...+++.++++|+.++.++++++... ..+++|++||........ . ...+.+.
T Consensus 74 ~g~id~li~nAG~~~---~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~ 150 (275)
T PRK06940 74 LGPVTGLVHTAGVSP---SQASPEAILKVDLYGTALVLEEFGKVIAPGGAGVVIASQSGHRLPALTAEQERALATTPTEE 150 (275)
T ss_pred cCCCCEEEECCCcCC---chhhHHHHHHHhhHHHHHHHHHHHHHHhhCCCEEEEEecccccCcccchhhhcccccccccc
Confidence 47999999999753 23567789999999999999987653 124567777754321110 0 0000000
Q ss_pred ----C-------CCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 149 ----P-------YGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 149 ----~-------~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
+ ..+...|+.||...+.+++.++.+. .++++.++.|+.+..+
T Consensus 151 ~~~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gIrvn~i~PG~v~T~ 205 (275)
T PRK06940 151 LLSLPFLQPDAIEDSLHAYQIAKRANALRVMAEAVKWGERGARINSISPGIISTP 205 (275)
T ss_pred ccccccccccccCCccchhHHHHHHHHHHHHHHHHHHccCCeEEEEeccCcCcCc
Confidence 0 0234579999999999999887764 3789999999988654
|
|
| >PRK05855 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.6e-17 Score=161.83 Aligned_cols=172 Identities=17% Similarity=0.136 Sum_probs=133.6
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
+.++++|||||+|+||++++++|+++|++|++++|+.....+..+.+... ..++.++.+|++|.+++.++++.
T Consensus 313 ~~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~~~~~~~~~~ 387 (582)
T PRK05855 313 FSGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAA-----GAVAHAYRVDVSDADAMEAFAEWVR 387 (582)
T ss_pred CCCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-----CCeEEEEEcCCCCHHHHHHHHHHHH
Confidence 34689999999999999999999999999999999765544444444322 14678999999999998888774
Q ss_pred ---CCCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHHH----HcC-CCEEEEeccccccCCCCCCCccCC
Q 019795 80 ---QKFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAMA----KYN-CKKLVFSSSATIYGQPEKIPCVED 147 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~-~~~~v~~Ss~~vyg~~~~~~~~e~ 147 (335)
..+|++|||||.... ..+.++++.++++|+.|+.++++++. +.+ .++||++||.+.|.
T Consensus 388 ~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~---------- 457 (582)
T PRK05855 388 AEHGVPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYA---------- 457 (582)
T ss_pred HhcCCCcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhcc----------
Confidence 368999999997432 22345667889999999999998754 333 25899999988764
Q ss_pred CCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccC
Q 019795 148 FPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVG 189 (335)
Q Consensus 148 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G 189 (335)
+..+...|+.||.+.+.+++.++.+. .++.+++++|+.|-.
T Consensus 458 -~~~~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t 500 (582)
T PRK05855 458 -PSRSLPAYATSKAAVLMLSECLRAELAAAGIGVTAICPGFVDT 500 (582)
T ss_pred -CCCCCcHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCCCcc
Confidence 22345689999999999988877663 278999999987743
|
|
| >PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=2.3e-17 Score=147.76 Aligned_cols=168 Identities=21% Similarity=0.170 Sum_probs=126.0
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCC-chhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc-
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNS-VPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~- 79 (335)
+++|+++||||+|+||+++++.|+++|++|++.++.... .....+.+... ..++.++.+|++|.+++.++++.
T Consensus 10 l~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~-----g~~~~~~~~Dv~d~~~~~~~~~~~ 84 (306)
T PRK07792 10 LSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAA-----GAKAVAVAGDISQRATADELVATA 84 (306)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhc-----CCeEEEEeCCCCCHHHHHHHHHHH
Confidence 567999999999999999999999999999998875432 22333333221 24678899999999988887764
Q ss_pred ---CCCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHHHHc--------C---CCEEEEeccccccCCCCC
Q 019795 80 ---QKFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAMAKY--------N---CKKLVFSSSATIYGQPEK 141 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~~--------~---~~~~v~~Ss~~vyg~~~~ 141 (335)
.++|++||+||.... ..+.++++..+++|+.++.++++++... + ..++|++||...+.
T Consensus 85 ~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~---- 160 (306)
T PRK07792 85 VGLGGLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLV---- 160 (306)
T ss_pred HHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCccccc----
Confidence 479999999997432 1234567789999999999999986421 1 14899999865431
Q ss_pred CCccCCCCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecc
Q 019795 142 IPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYF 185 (335)
Q Consensus 142 ~~~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~ 185 (335)
+......|+.+|...+.+++.++.+. .++.+.++.|+
T Consensus 161 -------~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~i~Pg 199 (306)
T PRK07792 161 -------GPVGQANYGAAKAGITALTLSAARALGRYGVRANAICPR 199 (306)
T ss_pred -------CCCCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEECCC
Confidence 12233479999999999999887763 27888888886
|
|
| >PRK06125 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=3.2e-17 Score=143.38 Aligned_cols=173 Identities=12% Similarity=0.053 Sum_probs=131.1
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc-CC
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-QK 81 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-~~ 81 (335)
++|+++|||++|+||+++++.|++.|++|++++|+........+.+.... ..++.++.+|++|++++.++++. ..
T Consensus 6 ~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~----~~~~~~~~~D~~~~~~~~~~~~~~g~ 81 (259)
T PRK06125 6 AGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAH----GVDVAVHALDLSSPEAREQLAAEAGD 81 (259)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhc----CCceEEEEecCCCHHHHHHHHHHhCC
Confidence 56899999999999999999999999999999997654444444443221 14678899999999999988875 47
Q ss_pred CCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHHH----HcCCCEEEEeccccccCCCCCCCccCCCCCCCC
Q 019795 82 FEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAMA----KYNCKKLVFSSSATIYGQPEKIPCVEDFPYGAM 153 (335)
Q Consensus 82 ~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~ 153 (335)
+|++||+|+.... ..+.++++..+++|+.++..+++++. +.+.+++|++||.... .+....
T Consensus 82 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~-----------~~~~~~ 150 (259)
T PRK06125 82 IDILVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARGSGVIVNVIGAAGE-----------NPDADY 150 (259)
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEecCcccc-----------CCCCCc
Confidence 9999999986421 22345667889999999999998863 3334589999885432 122334
Q ss_pred ChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 154 NPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 154 ~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
..|+.+|...+.+++.++.+. .++++..+.|+.+..+
T Consensus 151 ~~y~ask~al~~~~~~la~e~~~~gi~v~~i~PG~v~t~ 189 (259)
T PRK06125 151 ICGSAGNAALMAFTRALGGKSLDDGVRVVGVNPGPVATD 189 (259)
T ss_pred hHhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccH
Confidence 578999999999999877653 2789999999876544
|
|
| >PRK06924 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=9.2e-18 Score=146.07 Aligned_cols=168 Identities=20% Similarity=0.221 Sum_probs=123.2
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcC---
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQ--- 80 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~--- 80 (335)
||+++||||+|+||+++++.|+++|++|++++|++.+. ...+.+.. ..++.++.+|++|.+++.++++..
T Consensus 1 ~k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~---~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~ 73 (251)
T PRK06924 1 MRYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKE---LTKLAEQY----NSNLTFHSLDLQDVHELETNFNEILSS 73 (251)
T ss_pred CcEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHH---HHHHHhcc----CCceEEEEecCCCHHHHHHHHHHHHHh
Confidence 47999999999999999999999999999999865321 11121111 256888999999999998877641
Q ss_pred ----C--CCEEEEcccccch-----hhhhcChHHHHHHhHHHHHHHHHHHHH----c-CCCEEEEeccccccCCCCCCCc
Q 019795 81 ----K--FEAVIHFGALKAV-----AESVQHPFRYFDNNLIGTINLYQAMAK----Y-NCKKLVFSSSATIYGQPEKIPC 144 (335)
Q Consensus 81 ----~--~d~vi~~a~~~~~-----~~~~~~~~~~~~~nv~~~~~l~~~~~~----~-~~~~~v~~Ss~~vyg~~~~~~~ 144 (335)
. .+++||+||.... ..+.+.+...+++|+.++..+++.+.. . +.+++|++||...+
T Consensus 74 ~~~~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~-------- 145 (251)
T PRK06924 74 IQEDNVSSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISSGAAK-------- 145 (251)
T ss_pred cCcccCCceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCceEEEecchhhc--------
Confidence 1 2278999986422 223456667899999998877776543 2 23589999996643
Q ss_pred cCCCCCCCCChhHHhHHHHHHHHHHHHhhC----CCCeEEEEecccccC
Q 019795 145 VEDFPYGAMNPYGRTKQWCEEIAFDVQKAD----PEWRIILLRYFNPVG 189 (335)
Q Consensus 145 ~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~----~~~~~~~lR~~~v~G 189 (335)
.+..+...|+.+|...+.+++.++.+. .++++..++|+.+-.
T Consensus 146 ---~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t 191 (251)
T PRK06924 146 ---NPYFGWSAYCSSKAGLDMFTQTVATEQEEEEYPVKIVAFSPGVMDT 191 (251)
T ss_pred ---CCCCCcHHHhHHHHHHHHHHHHHHHHhhhcCCCeEEEEecCCcccc
Confidence 234456689999999999999887663 368899999986643
|
|
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.76 E-value=1.8e-17 Score=159.31 Aligned_cols=169 Identities=17% Similarity=0.189 Sum_probs=132.3
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc---
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS--- 79 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~--- 79 (335)
.+|++|||||+|+||+++++.|+++|++|++++|+........+.+ + ..+..+.+|++|++++.++++.
T Consensus 268 ~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----~----~~~~~~~~D~~~~~~~~~~~~~~~~ 339 (520)
T PRK06484 268 SPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEAL----G----DEHLSVQADITDEAAVESAFAQIQA 339 (520)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----C----CceeEEEccCCCHHHHHHHHHHHHH
Confidence 5789999999999999999999999999999998654333322221 1 4567789999999999888874
Q ss_pred --CCCCEEEEcccccc-----hhhhhcChHHHHHHhHHHHHHHHHHHHHc--CCCEEEEeccccccCCCCCCCccCCCCC
Q 019795 80 --QKFEAVIHFGALKA-----VAESVQHPFRYFDNNLIGTINLYQAMAKY--NCKKLVFSSSATIYGQPEKIPCVEDFPY 150 (335)
Q Consensus 80 --~~~d~vi~~a~~~~-----~~~~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~ 150 (335)
..+|++|||||... ...+.+.++.++++|+.++.++++++... +.++||++||...+. +.
T Consensus 340 ~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~ 408 (520)
T PRK06484 340 RWGRLDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIASLL-----------AL 408 (520)
T ss_pred HcCCCCEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchhhcC-----------CC
Confidence 46999999999742 12244567789999999999999987653 336899999976542 23
Q ss_pred CCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 151 GAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 151 ~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
.+...|+.+|...+.+++.++.+. .++++.++.|+.|..+
T Consensus 409 ~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~v~t~ 450 (520)
T PRK06484 409 PPRNAYCASKAAVTMLSRSLACEWAPAGIRVNTVAPGYIETP 450 (520)
T ss_pred CCCchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCc
Confidence 345689999999999999888764 2789999999988665
|
|
| >KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.76 E-value=4.9e-17 Score=138.72 Aligned_cols=168 Identities=18% Similarity=0.202 Sum_probs=135.7
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc---
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS--- 79 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~--- 79 (335)
++++||||||++++|+.++.+++++|..+++.+.+.....+..+.++++ ..+..+.+|+++.+++.++.++
T Consensus 37 ~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~------g~~~~y~cdis~~eei~~~a~~Vk~ 110 (300)
T KOG1201|consen 37 SGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKI------GEAKAYTCDISDREEIYRLAKKVKK 110 (300)
T ss_pred cCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhc------CceeEEEecCCCHHHHHHHHHHHHH
Confidence 5789999999999999999999999999999999999988888887765 2688999999999988877765
Q ss_pred --CCCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHH----HHcCCCEEEEeccccccCCCCCCCccCCCC
Q 019795 80 --QKFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAM----AKYNCKKLVFSSSATIYGQPEKIPCVEDFP 149 (335)
Q Consensus 80 --~~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~ 149 (335)
+.+|++||+||+... ..+.+..+.++++|+.|.....++. .+..-+++|.++|+..+ .+
T Consensus 111 e~G~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~~GHIV~IaS~aG~-----------~g 179 (300)
T KOG1201|consen 111 EVGDVDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENNNGHIVTIASVAGL-----------FG 179 (300)
T ss_pred hcCCceEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcCCceEEEehhhhcc-----------cC
Confidence 589999999998532 3345666789999999999888874 44455799999996643 13
Q ss_pred CCCCChhHHhHHHHHHHHHHHHhh-----CCCCeEEEEecccc
Q 019795 150 YGAMNPYGRTKQWCEEIAFDVQKA-----DPEWRIILLRYFNP 187 (335)
Q Consensus 150 ~~~~~~Y~~sK~~~E~~~~~~~~~-----~~~~~~~~lR~~~v 187 (335)
......|+.||.++.-+.+.+..+ ..+++++++.|+.+
T Consensus 180 ~~gl~~YcaSK~a~vGfhesL~~EL~~~~~~~IktTlv~P~~i 222 (300)
T KOG1201|consen 180 PAGLADYCASKFAAVGFHESLSMELRALGKDGIKTTLVCPYFI 222 (300)
T ss_pred CccchhhhhhHHHHHHHHHHHHHHHHhcCCCCeeEEEEeeeec
Confidence 344568999999988777766644 23688999988765
|
|
| >PRK07370 enoyl-(acyl carrier protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=99.76 E-value=3.3e-17 Score=143.22 Aligned_cols=172 Identities=17% Similarity=0.075 Sum_probs=127.8
Q ss_pred CCCeEEEEcCC--ChhhHHHHHHHHhCCCeEEEEecCCCC--chhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHh
Q 019795 3 SEKNILVTGGA--GFIGTHCALQLLQGGFKVVLIDNLHNS--VPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFS 78 (335)
Q Consensus 3 ~~~~vlItGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~ 78 (335)
++|+++||||+ +.||++++++|++.|++|++..|+... ..+..+++.+.. ....++.+|++|++++.++++
T Consensus 5 ~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~Dl~d~~~v~~~~~ 79 (258)
T PRK07370 5 TGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPL-----NPSLFLPCDVQDDAQIEETFE 79 (258)
T ss_pred CCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhcc-----CcceEeecCcCCHHHHHHHHH
Confidence 56899999986 799999999999999999888765432 222233332211 245688999999999988776
Q ss_pred c-----CCCCEEEEcccccc--------hhhhhcChHHHHHHhHHHHHHHHHHHHHc--CCCEEEEeccccccCCCCCCC
Q 019795 79 S-----QKFEAVIHFGALKA--------VAESVQHPFRYFDNNLIGTINLYQAMAKY--NCKKLVFSSSATIYGQPEKIP 143 (335)
Q Consensus 79 ~-----~~~d~vi~~a~~~~--------~~~~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~v~~Ss~~vyg~~~~~~ 143 (335)
. .++|++|||||... ...+.++++..+++|+.++..+++++... .-++||++||....
T Consensus 80 ~~~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~g~Iv~isS~~~~------- 152 (258)
T PRK07370 80 TIKQKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEGGSIVTLTYLGGV------- 152 (258)
T ss_pred HHHHHcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhCCeEEEEeccccc-------
Confidence 4 37999999999642 12234567789999999999999986542 12589999985432
Q ss_pred ccCCCCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 144 CVEDFPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 144 ~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
.+......|+.+|...+.+++.++.+. .++.+.++.|+.+-.+
T Consensus 153 ----~~~~~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~i~PG~v~T~ 197 (258)
T PRK07370 153 ----RAIPNYNVMGVAKAALEASVRYLAAELGPKNIRVNAISAGPIRTL 197 (258)
T ss_pred ----cCCcccchhhHHHHHHHHHHHHHHHHhCcCCeEEEEEecCcccCc
Confidence 122334579999999999999988775 2689999999887543
|
|
| >PLN02780 ketoreductase/ oxidoreductase | Back alignment and domain information |
|---|
Probab=99.76 E-value=2.7e-17 Score=147.89 Aligned_cols=175 Identities=15% Similarity=0.141 Sum_probs=127.3
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCC--HHHHHHH---H
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRN--KDDLDKL---F 77 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d--~~~~~~~---~ 77 (335)
.++.++||||||+||++++++|+++|++|++++|++...++..+++....+ ..++..+.+|+++ .+.++++ +
T Consensus 52 ~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~---~~~~~~~~~Dl~~~~~~~~~~l~~~~ 128 (320)
T PLN02780 52 YGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYS---KTQIKTVVVDFSGDIDEGVKRIKETI 128 (320)
T ss_pred cCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCC---CcEEEEEEEECCCCcHHHHHHHHHHh
Confidence 368999999999999999999999999999999987665555554443211 1357788899985 3334433 3
Q ss_pred hcCCCCEEEEcccccch------hhhhcChHHHHHHhHHHHHHHHHHHH----HcCCCEEEEeccccccCCCCCCCccCC
Q 019795 78 SSQKFEAVIHFGALKAV------AESVQHPFRYFDNNLIGTINLYQAMA----KYNCKKLVFSSSATIYGQPEKIPCVED 147 (335)
Q Consensus 78 ~~~~~d~vi~~a~~~~~------~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~v~~Ss~~vyg~~~~~~~~e~ 147 (335)
....+|++||+||.... ..+.++.+.++++|+.++..+++++. +.+.+++|++||...+..+
T Consensus 129 ~~~didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~-------- 200 (320)
T PLN02780 129 EGLDVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIINIGSGAAIVIP-------- 200 (320)
T ss_pred cCCCccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCC--------
Confidence 32346799999997421 12344566789999999999999864 3455799999997654210
Q ss_pred CCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccC
Q 019795 148 FPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVG 189 (335)
Q Consensus 148 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G 189 (335)
+......|+.||...+.+.+.++.+. .++.+.++.|+.|-.
T Consensus 201 -~~p~~~~Y~aSKaal~~~~~~L~~El~~~gI~V~~v~PG~v~T 243 (320)
T PLN02780 201 -SDPLYAVYAATKAYIDQFSRCLYVEYKKSGIDVQCQVPLYVAT 243 (320)
T ss_pred -CCccchHHHHHHHHHHHHHHHHHHHHhccCeEEEEEeeCceec
Confidence 11224689999999999999888774 278999999987643
|
|
| >PRK07201 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=1.7e-17 Score=163.94 Aligned_cols=173 Identities=14% Similarity=0.141 Sum_probs=134.7
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
+++|+++||||||+||+++++.|+++|++|++++|++....+..+.+... ..++.++.+|++|.+++.++++.
T Consensus 369 ~~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~~~~~~~~~~ 443 (657)
T PRK07201 369 LVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAK-----GGTAHAYTCDLTDSAAVDHTVKDIL 443 (657)
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc-----CCcEEEEEecCCCHHHHHHHHHHHH
Confidence 45789999999999999999999999999999999765544444433321 14688899999999999888774
Q ss_pred ---CCCCEEEEcccccch---hhh---hcChHHHHHHhHHHHHHHHHHHH----HcCCCEEEEeccccccCCCCCCCccC
Q 019795 80 ---QKFEAVIHFGALKAV---AES---VQHPFRYFDNNLIGTINLYQAMA----KYNCKKLVFSSSATIYGQPEKIPCVE 146 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~~---~~~---~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~v~~Ss~~vyg~~~~~~~~e 146 (335)
.++|++||+||.... ... .++++..+++|+.++.++++++. +.+.+++|++||.+.++.
T Consensus 444 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~-------- 515 (657)
T PRK07201 444 AEHGHVDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERRFGHVVNVSSIGVQTN-------- 515 (657)
T ss_pred HhcCCCCEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCC--------
Confidence 379999999996421 111 24567889999999999877753 445679999999887642
Q ss_pred CCCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 147 DFPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 147 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
......|+.+|...+.+++.++.+. .++.+++++|+.|..+
T Consensus 516 ---~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~T~ 558 (657)
T PRK07201 516 ---APRFSAYVASKAALDAFSDVAASETLSDGITFTTIHMPLVRTP 558 (657)
T ss_pred ---CCCcchHHHHHHHHHHHHHHHHHHHHhhCCcEEEEECCcCccc
Confidence 2234579999999999999877663 3799999999998765
|
|
| >TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative | Back alignment and domain information |
|---|
Probab=99.76 E-value=3.9e-17 Score=141.06 Aligned_cols=167 Identities=15% Similarity=0.078 Sum_probs=125.3
Q ss_pred EEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCC-chhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc-----C
Q 019795 7 ILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNS-VPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-----Q 80 (335)
Q Consensus 7 vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-----~ 80 (335)
|+||||+|+||.++++.|+++|++|++++|+... .....+.+.+. +.++.++.+|++|.+++.++++. .
T Consensus 1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~-----~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 75 (239)
T TIGR01831 1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQ-----GGNARLLQFDVADRVACRTLLEADIAEHG 75 (239)
T ss_pred CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHc-----CCeEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 6899999999999999999999999998875432 22222333221 24688999999999998887764 3
Q ss_pred CCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHHH-----HcCCCEEEEeccccc-cCCCCCCCccCCCCC
Q 019795 81 KFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAMA-----KYNCKKLVFSSSATI-YGQPEKIPCVEDFPY 150 (335)
Q Consensus 81 ~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~-----~~~~~~~v~~Ss~~v-yg~~~~~~~~e~~~~ 150 (335)
.+|++||+|+.... ..+.++++.++++|+.++.++++++. +.+.+++|++||... ++ .
T Consensus 76 ~i~~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~------------~ 143 (239)
T TIGR01831 76 AYYGVVLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQGGRIITLASVSGVMG------------N 143 (239)
T ss_pred CCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCeEEEEEcchhhccC------------C
Confidence 68999999986422 22455677899999999999988752 234468999999553 32 2
Q ss_pred CCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 151 GAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 151 ~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
.....|+.+|...+.+++.++.++ .++.+..++|+.+.++
T Consensus 144 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~ 185 (239)
T TIGR01831 144 RGQVNYSAAKAGLIGATKALAVELAKRKITVNCIAPGLIDTE 185 (239)
T ss_pred CCCcchHHHHHHHHHHHHHHHHHHhHhCeEEEEEEEccCccc
Confidence 234579999999988888777653 2799999999988665
|
This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found. |
| >PRK07533 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=7.1e-17 Score=141.14 Aligned_cols=172 Identities=16% Similarity=0.031 Sum_probs=127.1
Q ss_pred CCCCeEEEEcCC--ChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc
Q 019795 2 ASEKNILVTGGA--GFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS 79 (335)
Q Consensus 2 ~~~~~vlItGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~ 79 (335)
+++|+++||||+ +.||++++++|+++|++|++++|+... .+..+++.+.. ....++.+|++|.+++.++++.
T Consensus 8 ~~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~-~~~~~~~~~~~-----~~~~~~~~D~~~~~~v~~~~~~ 81 (258)
T PRK07533 8 LAGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKA-RPYVEPLAEEL-----DAPIFLPLDVREPGQLEAVFAR 81 (258)
T ss_pred cCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhh-HHHHHHHHHhh-----ccceEEecCcCCHHHHHHHHHH
Confidence 357999999998 599999999999999999999886432 12222222211 2345789999999998887764
Q ss_pred -----CCCCEEEEcccccch--------hhhhcChHHHHHHhHHHHHHHHHHHHHc--CCCEEEEeccccccCCCCCCCc
Q 019795 80 -----QKFEAVIHFGALKAV--------AESVQHPFRYFDNNLIGTINLYQAMAKY--NCKKLVFSSSATIYGQPEKIPC 144 (335)
Q Consensus 80 -----~~~d~vi~~a~~~~~--------~~~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~v~~Ss~~vyg~~~~~~~ 144 (335)
.++|++|||||.... ..+.++++..+++|+.++.++++++... .-.++|++||....
T Consensus 82 ~~~~~g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~g~Ii~iss~~~~-------- 153 (258)
T PRK07533 82 IAEEWGRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTNGGSLLTMSYYGAE-------- 153 (258)
T ss_pred HHHHcCCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhccCCEEEEEeccccc--------
Confidence 479999999987421 1234567789999999999999986543 12589999885432
Q ss_pred cCCCCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 145 VEDFPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 145 ~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
.+......|+.+|...+.+++.++.+. .++++.++.|+.+-.+
T Consensus 154 ---~~~~~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~v~PG~v~T~ 198 (258)
T PRK07533 154 ---KVVENYNLMGPVKAALESSVRYLAAELGPKGIRVHAISPGPLKTR 198 (258)
T ss_pred ---cCCccchhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCcCCh
Confidence 012234579999999999999888764 2789999999877543
|
|
| >PRK05884 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=4.5e-17 Score=139.23 Aligned_cols=160 Identities=14% Similarity=0.110 Sum_probs=122.5
Q ss_pred eEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcC--CCC
Q 019795 6 NILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQ--KFE 83 (335)
Q Consensus 6 ~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~--~~d 83 (335)
+++||||+|+||+++++.|+++|++|++++|+..+.....+. .++.++.+|++|++++.++++.. .+|
T Consensus 2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~----------~~~~~~~~D~~~~~~v~~~~~~~~~~id 71 (223)
T PRK05884 2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKE----------LDVDAIVCDNTDPASLEEARGLFPHHLD 71 (223)
T ss_pred eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh----------ccCcEEecCCCCHHHHHHHHHHHhhcCc
Confidence 699999999999999999999999999999864432222111 13567899999999999888742 589
Q ss_pred EEEEcccccc---------hhhhhcChHHHHHHhHHHHHHHHHHHHHc--CCCEEEEeccccccCCCCCCCccCCCCCCC
Q 019795 84 AVIHFGALKA---------VAESVQHPFRYFDNNLIGTINLYQAMAKY--NCKKLVFSSSATIYGQPEKIPCVEDFPYGA 152 (335)
Q Consensus 84 ~vi~~a~~~~---------~~~~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~ 152 (335)
++||+|+... ...+.++++..+++|+.++.++++++... ..+++|++||.. ..+
T Consensus 72 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~Iv~isS~~---------------~~~ 136 (223)
T PRK05884 72 TIVNVPAPSWDAGDPRTYSLADTANAWRNALDATVLSAVLTVQSVGDHLRSGGSIISVVPEN---------------PPA 136 (223)
T ss_pred EEEECCCccccCCCCcccchhcCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCeEEEEecCC---------------CCC
Confidence 9999987421 11124567789999999999999997642 225899999854 112
Q ss_pred CChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 153 MNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 153 ~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
...|+.+|...+.+++.++.+. .++++..+.|+.+..+
T Consensus 137 ~~~Y~asKaal~~~~~~la~e~~~~gI~v~~v~PG~v~t~ 176 (223)
T PRK05884 137 GSAEAAIKAALSNWTAGQAAVFGTRGITINAVACGRSVQP 176 (223)
T ss_pred ccccHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccCch
Confidence 3579999999999999888764 2789999999887543
|
|
| >PRK08690 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=7.3e-17 Score=141.30 Aligned_cols=172 Identities=14% Similarity=0.025 Sum_probs=124.4
Q ss_pred CCCCeEEEEcC--CChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc
Q 019795 2 ASEKNILVTGG--AGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS 79 (335)
Q Consensus 2 ~~~~~vlItGa--tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~ 79 (335)
+++|+++|||| ++.||+++++.|+++|++|++..|.. ...+..+.+.... .....+.+|++|++++.++++.
T Consensus 4 ~~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~-~~~~~~~~~~~~~-----~~~~~~~~Dv~~~~~v~~~~~~ 77 (261)
T PRK08690 4 LQGKKILITGMISERSIAYGIAKACREQGAELAFTYVVD-KLEERVRKMAAEL-----DSELVFRCDVASDDEINQVFAD 77 (261)
T ss_pred cCCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcH-HHHHHHHHHHhcc-----CCceEEECCCCCHHHHHHHHHH
Confidence 56789999997 67999999999999999999887642 2222233332211 2345789999999999888764
Q ss_pred -----CCCCEEEEcccccch---------hhhhcChHHHHHHhHHHHHHHHHHHHHc---CCCEEEEeccccccCCCCCC
Q 019795 80 -----QKFEAVIHFGALKAV---------AESVQHPFRYFDNNLIGTINLYQAMAKY---NCKKLVFSSSATIYGQPEKI 142 (335)
Q Consensus 80 -----~~~d~vi~~a~~~~~---------~~~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~~v~~Ss~~vyg~~~~~ 142 (335)
.++|++|||||.... ..+.+.++..+++|+.++..+++++... +.+++|++||.....
T Consensus 78 ~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~~g~Iv~iss~~~~~----- 152 (261)
T PRK08690 78 LGKHWDGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGRNSAIVALSYLGAVR----- 152 (261)
T ss_pred HHHHhCCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhcCcEEEEEccccccc-----
Confidence 479999999997531 1122345677899999999888875432 225899999865431
Q ss_pred CccCCCCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 143 PCVEDFPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 143 ~~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
+......|+.+|...+.+++.++.+. .++++.++.|+.+-.+
T Consensus 153 ------~~~~~~~Y~asKaal~~l~~~la~e~~~~gIrVn~i~PG~v~T~ 196 (261)
T PRK08690 153 ------AIPNYNVMGMAKASLEAGIRFTAACLGKEGIRCNGISAGPIKTL 196 (261)
T ss_pred ------CCCCcccchhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccch
Confidence 22334579999999999998877653 2789999999887443
|
|
| >PRK08159 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=7.7e-17 Score=141.91 Aligned_cols=171 Identities=13% Similarity=0.022 Sum_probs=126.9
Q ss_pred CCCCeEEEEcCC--ChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc
Q 019795 2 ASEKNILVTGGA--GFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS 79 (335)
Q Consensus 2 ~~~~~vlItGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~ 79 (335)
|++|++|||||+ +.||.++++.|+++|++|++++|+. ...+..+.+.+.. .....+.+|++|+++++++++.
T Consensus 8 ~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~-~~~~~~~~l~~~~-----~~~~~~~~Dl~~~~~v~~~~~~ 81 (272)
T PRK08159 8 MAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGD-ALKKRVEPLAAEL-----GAFVAGHCDVTDEASIDAVFET 81 (272)
T ss_pred ccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCch-HHHHHHHHHHHhc-----CCceEEecCCCCHHHHHHHHHH
Confidence 467999999997 8999999999999999999887742 1222222232211 2245689999999999888764
Q ss_pred -----CCCCEEEEcccccch--------hhhhcChHHHHHHhHHHHHHHHHHHHHc--CCCEEEEeccccccCCCCCCCc
Q 019795 80 -----QKFEAVIHFGALKAV--------AESVQHPFRYFDNNLIGTINLYQAMAKY--NCKKLVFSSSATIYGQPEKIPC 144 (335)
Q Consensus 80 -----~~~d~vi~~a~~~~~--------~~~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~v~~Ss~~vyg~~~~~~~ 144 (335)
..+|++||+||.... ..+.++++..+++|+.++..+++++... +-+++|++||....
T Consensus 82 ~~~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~-------- 153 (272)
T PRK08159 82 LEKKWGKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTDGGSILTLTYYGAE-------- 153 (272)
T ss_pred HHHhcCCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCCCceEEEEeccccc--------
Confidence 379999999997421 2234567789999999999999987653 23589999985432
Q ss_pred cCCCCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccC
Q 019795 145 VEDFPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVG 189 (335)
Q Consensus 145 ~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G 189 (335)
.+......|+.+|...+.+++.++.+. .++++.++.|+.+..
T Consensus 154 ---~~~p~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T 197 (272)
T PRK08159 154 ---KVMPHYNVMGVAKAALEASVKYLAVDLGPKNIRVNAISAGPIKT 197 (272)
T ss_pred ---cCCCcchhhhhHHHHHHHHHHHHHHHhcccCeEEEEeecCCcCC
Confidence 122234579999999999999888774 268999999987754
|
|
| >PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=9.9e-17 Score=140.06 Aligned_cols=177 Identities=14% Similarity=0.046 Sum_probs=126.6
Q ss_pred CCCCeEEEEcCCC--hhhHHHHHHHHhCCCeEEEEecCCCC-------chhhHHhhhhhcCCccccceeEEEccCCCHHH
Q 019795 2 ASEKNILVTGGAG--FIGTHCALQLLQGGFKVVLIDNLHNS-------VPEAVDRVKDLAGPELAKKLEFHVGDLRNKDD 72 (335)
Q Consensus 2 ~~~~~vlItGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~-------~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~ 72 (335)
+++|++|||||+| +||+++++.|+++|++|++++|.... ......++.+... ..+..+.++.+|++|.++
T Consensus 4 l~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~D~~~~~~ 82 (256)
T PRK12859 4 LKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELL-KNGVKVSSMELDLTQNDA 82 (256)
T ss_pred cCCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHH-hcCCeEEEEEcCCCCHHH
Confidence 3578999999995 89999999999999999987643211 0111111111110 112467889999999999
Q ss_pred HHHHHhc-----CCCCEEEEcccccc----hhhhhcChHHHHHHhHHHHHHHHHHHH----HcCCCEEEEeccccccCCC
Q 019795 73 LDKLFSS-----QKFEAVIHFGALKA----VAESVQHPFRYFDNNLIGTINLYQAMA----KYNCKKLVFSSSATIYGQP 139 (335)
Q Consensus 73 ~~~~~~~-----~~~d~vi~~a~~~~----~~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~v~~Ss~~vyg~~ 139 (335)
+.++++. ..+|++||+|+... ...+.+.++..+++|+.++..+.+++. +.+.++||++||....
T Consensus 83 i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~--- 159 (256)
T PRK12859 83 PKELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKSGGRIINMTSGQFQ--- 159 (256)
T ss_pred HHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEEcccccC---
Confidence 9888864 35899999998642 122345667789999999999876643 3334589999996543
Q ss_pred CCCCccCCCCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 140 EKIPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 140 ~~~~~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
.+..+...|+.+|...+.+++.++.+. .++++..++|+.+-.+
T Consensus 160 --------~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~PG~i~t~ 204 (256)
T PRK12859 160 --------GPMVGELAYAATKGAIDALTSSLAAEVAHLGITVNAINPGPTDTG 204 (256)
T ss_pred --------CCCCCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEEccccCC
Confidence 133455689999999999999888763 3799999999877443
|
|
| >PRK08303 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.3e-16 Score=142.64 Aligned_cols=172 Identities=14% Similarity=0.056 Sum_probs=124.4
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCC----------chhhHHhhhhhcCCccccceeEEEccCCCHHH
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNS----------VPEAVDRVKDLAGPELAKKLEFHVGDLRNKDD 72 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~----------~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~ 72 (335)
++|+++||||+++||++++++|++.|++|++++|+... .....+.+... +..+.++.+|++|+++
T Consensus 7 ~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~-----~~~~~~~~~Dv~~~~~ 81 (305)
T PRK08303 7 RGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAA-----GGRGIAVQVDHLVPEQ 81 (305)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhc-----CCceEEEEcCCCCHHH
Confidence 46899999999999999999999999999999987431 12222222211 1356789999999999
Q ss_pred HHHHHhc-----CCCCEEEEcc-cccc--------hhhhhcChHHHHHHhHHHHHHHHHHHHH----cCCCEEEEecccc
Q 019795 73 LDKLFSS-----QKFEAVIHFG-ALKA--------VAESVQHPFRYFDNNLIGTINLYQAMAK----YNCKKLVFSSSAT 134 (335)
Q Consensus 73 ~~~~~~~-----~~~d~vi~~a-~~~~--------~~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~v~~Ss~~ 134 (335)
+++++++ .++|++||+| +... ...+.+++...+++|+.++..+++++.. .+-.+||++||..
T Consensus 82 v~~~~~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~~g~IV~isS~~ 161 (305)
T PRK08303 82 VRALVERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRPGGLVVEITDGT 161 (305)
T ss_pred HHHHHHHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCCCcEEEEECCcc
Confidence 9888775 4799999999 6321 1112345667889999999998887653 2236899999854
Q ss_pred c-cCCCCCCCccCCCCCCCCChhHHhHHHHHHHHHHHHhhCC--CCeEEEEeccccc
Q 019795 135 I-YGQPEKIPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKADP--EWRIILLRYFNPV 188 (335)
Q Consensus 135 v-yg~~~~~~~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~--~~~~~~lR~~~v~ 188 (335)
. ++.. +......|+.+|.....+++.++.+.. ++++.++.|+.+-
T Consensus 162 ~~~~~~---------~~~~~~~Y~asKaal~~lt~~La~el~~~gIrVn~v~PG~v~ 209 (305)
T PRK08303 162 AEYNAT---------HYRLSVFYDLAKTSVNRLAFSLAHELAPHGATAVALTPGWLR 209 (305)
T ss_pred ccccCc---------CCCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEecCCccc
Confidence 2 2110 112234699999999999998887752 6888899887663
|
|
| >PRK06603 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=9.3e-17 Score=140.53 Aligned_cols=172 Identities=14% Similarity=0.030 Sum_probs=126.5
Q ss_pred CCCCeEEEEcCCC--hhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc
Q 019795 2 ASEKNILVTGGAG--FIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS 79 (335)
Q Consensus 2 ~~~~~vlItGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~ 79 (335)
+++|+++||||++ .||+++++.|+++|++|++.+|+. ...+..+.+.+.. ....++.+|++|++++.++++.
T Consensus 6 ~~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~-~~~~~~~~l~~~~-----g~~~~~~~Dv~~~~~v~~~~~~ 79 (260)
T PRK06603 6 LQGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSE-VLEKRVKPLAEEI-----GCNFVSELDVTNPKSISNLFDD 79 (260)
T ss_pred cCCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCch-HHHHHHHHHHHhc-----CCceEEEccCCCHHHHHHHHHH
Confidence 4578999999997 899999999999999999888752 2222333333211 1224578999999998888764
Q ss_pred -----CCCCEEEEcccccch--------hhhhcChHHHHHHhHHHHHHHHHHHHHc--CCCEEEEeccccccCCCCCCCc
Q 019795 80 -----QKFEAVIHFGALKAV--------AESVQHPFRYFDNNLIGTINLYQAMAKY--NCKKLVFSSSATIYGQPEKIPC 144 (335)
Q Consensus 80 -----~~~d~vi~~a~~~~~--------~~~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~v~~Ss~~vyg~~~~~~~ 144 (335)
.++|++||+|+.... ..+.++++..+++|+.++..+++++... .-.++|++||.....
T Consensus 80 ~~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~------- 152 (260)
T PRK06603 80 IKEKWGSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHDGGSIVTLTYYGAEK------- 152 (260)
T ss_pred HHHHcCCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhccCceEEEEecCcccc-------
Confidence 479999999986321 2244567789999999999999986432 125899999855321
Q ss_pred cCCCCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 145 VEDFPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 145 ~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
+......|+.||...+.+++.++.+. .++.+.++.|+.+-.+
T Consensus 153 ----~~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~ 196 (260)
T PRK06603 153 ----VIPNYNVMGVAKAALEASVKYLANDMGENNIRVNAISAGPIKTL 196 (260)
T ss_pred ----CCCcccchhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcCcch
Confidence 22234579999999999999988764 2789999999887443
|
|
| >PRK06997 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.2e-16 Score=139.78 Aligned_cols=171 Identities=15% Similarity=-0.002 Sum_probs=125.4
Q ss_pred CCCCeEEEEcC--CChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc
Q 019795 2 ASEKNILVTGG--AGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS 79 (335)
Q Consensus 2 ~~~~~vlItGa--tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~ 79 (335)
+++|+++|||| ++.||.+++++|+++|++|++++|... ..+..+.+.+.. .....+.+|++|++++.++++.
T Consensus 4 l~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~-~~~~~~~~~~~~-----~~~~~~~~Dv~d~~~v~~~~~~ 77 (260)
T PRK06997 4 LAGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDR-FKDRITEFAAEF-----GSDLVFPCDVASDEQIDALFAS 77 (260)
T ss_pred cCCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchH-HHHHHHHHHHhc-----CCcceeeccCCCHHHHHHHHHH
Confidence 45689999996 679999999999999999998876422 122222222211 1234688999999999988864
Q ss_pred -----CCCCEEEEcccccch---------hhhhcChHHHHHHhHHHHHHHHHHHHHc--CCCEEEEeccccccCCCCCCC
Q 019795 80 -----QKFEAVIHFGALKAV---------AESVQHPFRYFDNNLIGTINLYQAMAKY--NCKKLVFSSSATIYGQPEKIP 143 (335)
Q Consensus 80 -----~~~d~vi~~a~~~~~---------~~~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~v~~Ss~~vyg~~~~~~ 143 (335)
.++|++||+||.... ..+.++++..+++|+.++..+++++... +.+++|++||....
T Consensus 78 ~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~~g~Ii~iss~~~~------- 150 (260)
T PRK06997 78 LGQHWDGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAE------- 150 (260)
T ss_pred HHHHhCCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeccccc-------
Confidence 479999999997421 1234567788999999999999987653 23589999985532
Q ss_pred ccCCCCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccC
Q 019795 144 CVEDFPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVG 189 (335)
Q Consensus 144 ~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G 189 (335)
.+......|+.+|...+.+++.++.+. .++++.++.|+.+-.
T Consensus 151 ----~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T 194 (260)
T PRK06997 151 ----RVVPNYNTMGLAKASLEASVRYLAVSLGPKGIRANGISAGPIKT 194 (260)
T ss_pred ----cCCCCcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCcccc
Confidence 122234579999999999999988774 278999999987744
|
|
| >TIGR02685 pter_reduc_Leis pteridine reductase | Back alignment and domain information |
|---|
Probab=99.74 E-value=9e-17 Score=141.23 Aligned_cols=171 Identities=18% Similarity=0.140 Sum_probs=120.0
Q ss_pred CeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCC-CCchhhHHhhhhhcCCccccceeEEEccCCCHHHH----HHHHhc
Q 019795 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLH-NSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDL----DKLFSS 79 (335)
Q Consensus 5 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~----~~~~~~ 79 (335)
++++||||+|+||++++++|+++|++|++++|+. .......+.+.... +..+.++.+|++|.+++ .++++.
T Consensus 2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~----~~~~~~~~~Dv~d~~~~~~~~~~~~~~ 77 (267)
T TIGR02685 2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARR----PNSAVTCQADLSNSATLFSRCEAIIDA 77 (267)
T ss_pred CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhcc----CCceEEEEccCCCchhhHHHHHHHHHH
Confidence 5899999999999999999999999999887643 23322333332211 13566789999998754 333322
Q ss_pred -----CCCCEEEEcccccchhh----hh-----------cChHHHHHHhHHHHHHHHHHHHHcC----------CCEEEE
Q 019795 80 -----QKFEAVIHFGALKAVAE----SV-----------QHPFRYFDNNLIGTINLYQAMAKYN----------CKKLVF 129 (335)
Q Consensus 80 -----~~~d~vi~~a~~~~~~~----~~-----------~~~~~~~~~nv~~~~~l~~~~~~~~----------~~~~v~ 129 (335)
.++|+||||||...... .. ..+...+++|+.++..+++++.... ..++|+
T Consensus 78 ~~~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~ 157 (267)
T TIGR02685 78 CFRAFGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVN 157 (267)
T ss_pred HHHccCCceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCCeEEEE
Confidence 37999999999632111 11 1255789999999999998754321 135777
Q ss_pred eccccccCCCCCCCccCCCCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 130 SSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 130 ~Ss~~vyg~~~~~~~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
+||.... .+..+...|+.+|...+.+++.++.+. .++++.+++|+.+..+
T Consensus 158 ~~s~~~~-----------~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~~~~~ 209 (267)
T TIGR02685 158 LCDAMTD-----------QPLLGFTMYTMAKHALEGLTRSAALELAPLQIRVNGVAPGLSLLP 209 (267)
T ss_pred ehhhhcc-----------CCCcccchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCccCc
Confidence 7775432 133455689999999999999887773 3799999999987544
|
Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family. |
| >PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases | Back alignment and domain information |
|---|
Probab=99.73 E-value=7.7e-17 Score=131.31 Aligned_cols=153 Identities=22% Similarity=0.244 Sum_probs=119.1
Q ss_pred CeEEEEcCCChhhHHHHHHHHhCC-CeEEEEecC--CCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 5 KNILVTGGAGFIGTHCALQLLQGG-FKVVLIDNL--HNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 5 ~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
|+++||||++.||.++++.|+++| +.|++++|+ .+...+....+... ..++.++.+|+++.++++++++.
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~ 75 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAP-----GAKITFIECDLSDPESIRALIEEVI 75 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHT-----TSEEEEEESETTSHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccc-----ccccccccccccccccccccccccc
Confidence 689999999999999999999995 577888886 22223333333311 26889999999999998888775
Q ss_pred ---CCCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccCCCCCCCccCCCCCCC
Q 019795 80 ---QKFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQPEKIPCVEDFPYGA 152 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~ 152 (335)
..+|++||+|+.... ..+.+.++.++++|+.++..+.+++...+-+++|++||.... .+...
T Consensus 76 ~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~g~iv~~sS~~~~-----------~~~~~ 144 (167)
T PF00106_consen 76 KRFGPLDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLPQGGGKIVNISSIAGV-----------RGSPG 144 (167)
T ss_dssp HHHSSESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHTTEEEEEEEEGGGT-----------SSSTT
T ss_pred cccccccccccccccccccccccccchhhhhccccccceeeeeeehheeccccceEEecchhhc-----------cCCCC
Confidence 479999999997542 223456678999999999999999888556799999996654 13344
Q ss_pred CChhHHhHHHHHHHHHHHHhh
Q 019795 153 MNPYGRTKQWCEEIAFDVQKA 173 (335)
Q Consensus 153 ~~~Y~~sK~~~E~~~~~~~~~ 173 (335)
...|+.+|...+.+++.++.+
T Consensus 145 ~~~Y~askaal~~~~~~la~e 165 (167)
T PF00106_consen 145 MSAYSASKAALRGLTQSLAAE 165 (167)
T ss_dssp BHHHHHHHHHHHHHHHHHHHH
T ss_pred ChhHHHHHHHHHHHHHHHHHh
Confidence 568999999999999988765
|
As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A .... |
| >TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.73 E-value=1e-16 Score=157.38 Aligned_cols=173 Identities=17% Similarity=0.140 Sum_probs=129.4
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
+++|+||||||+|+||++++++|+++|++|++++|+..........+....+ ...+..+.+|++|.+++.+++++
T Consensus 412 l~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~---~~~~~~v~~Dvtd~~~v~~a~~~i~ 488 (676)
T TIGR02632 412 LARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFG---AGRAVALKMDVTDEQAVKAAFADVA 488 (676)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcC---CCcEEEEECCCCCHHHHHHHHHHHH
Confidence 3578999999999999999999999999999999876544433333322111 13567899999999999888875
Q ss_pred ---CCCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHHH----HcC-CCEEEEeccccccCCCCCCCccCC
Q 019795 80 ---QKFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAMA----KYN-CKKLVFSSSATIYGQPEKIPCVED 147 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~-~~~~v~~Ss~~vyg~~~~~~~~e~ 147 (335)
.++|+|||+||.... ..+.+.++..+++|+.+...+++.+. +.+ ..++|++||...+.
T Consensus 489 ~~~g~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~~a~~---------- 558 (676)
T TIGR02632 489 LAYGGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASKNAVY---------- 558 (676)
T ss_pred HhcCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeChhhcC----------
Confidence 379999999997432 12334566789999999888776543 333 25899999955431
Q ss_pred CCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEeccccc
Q 019795 148 FPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPV 188 (335)
Q Consensus 148 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~ 188 (335)
+......|+.+|...+.+++.++.+. .++++.+++|+.|+
T Consensus 559 -~~~~~~aY~aSKaA~~~l~r~lA~el~~~gIrVn~V~Pg~V~ 600 (676)
T TIGR02632 559 -AGKNASAYSAAKAAEAHLARCLAAEGGTYGIRVNTVNPDAVL 600 (676)
T ss_pred -CCCCCHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEECCcee
Confidence 22234689999999999999888764 27899999999886
|
|
| >PRK07889 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=2.9e-16 Score=137.11 Aligned_cols=170 Identities=17% Similarity=0.079 Sum_probs=124.2
Q ss_pred CCCeEEEEcC--CChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc-
Q 019795 3 SEKNILVTGG--AGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS- 79 (335)
Q Consensus 3 ~~~~vlItGa--tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~- 79 (335)
++|+++|||| ++.||.++++.|+++|++|++++|+... +..+.+.+..+ ..+.++.+|++|+++++++++.
T Consensus 6 ~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~--~~~~~~~~~~~----~~~~~~~~Dv~~~~~i~~~~~~~ 79 (256)
T PRK07889 6 EGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRAL--RLTERIAKRLP----EPAPVLELDVTNEEHLASLADRV 79 (256)
T ss_pred cCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccch--hHHHHHHHhcC----CCCcEEeCCCCCHHHHHHHHHHH
Confidence 3589999999 8999999999999999999999876421 11222222111 3567899999999998887764
Q ss_pred ----CCCCEEEEcccccch--------hhhhcChHHHHHHhHHHHHHHHHHHHHc--CCCEEEEeccccccCCCCCCCcc
Q 019795 80 ----QKFEAVIHFGALKAV--------AESVQHPFRYFDNNLIGTINLYQAMAKY--NCKKLVFSSSATIYGQPEKIPCV 145 (335)
Q Consensus 80 ----~~~d~vi~~a~~~~~--------~~~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~v~~Ss~~vyg~~~~~~~~ 145 (335)
.++|++||+||.... ..+.++++..+++|+.++..+++++... .-+++|++|+....
T Consensus 80 ~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~g~Iv~is~~~~~--------- 150 (256)
T PRK07889 80 REHVDGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNEGGSIVGLDFDATV--------- 150 (256)
T ss_pred HHHcCCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhcccCceEEEEeecccc---------
Confidence 479999999997421 1133455678999999999999886543 22578888753321
Q ss_pred CCCCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 146 EDFPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 146 e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
+......|+.||...+.+++.++.+. .++++.++.|+.+-.+
T Consensus 151 ---~~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~ 194 (256)
T PRK07889 151 ---AWPAYDWMGVAKAALESTNRYLARDLGPRGIRVNLVAAGPIRTL 194 (256)
T ss_pred ---cCCccchhHHHHHHHHHHHHHHHHHhhhcCeEEEeeccCcccCh
Confidence 11223569999999999999888764 2788999999877543
|
|
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.4e-16 Score=153.23 Aligned_cols=169 Identities=15% Similarity=0.152 Sum_probs=130.9
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc---
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS--- 79 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~--- 79 (335)
++|+++||||+++||.+++++|+++|++|++++|+........+.+ + .++.++.+|++|++++.++++.
T Consensus 4 ~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~----~~~~~~~~D~~~~~~~~~~~~~~~~ 75 (520)
T PRK06484 4 QSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSL----G----PDHHALAMDVSDEAQIREGFEQLHR 75 (520)
T ss_pred CCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----C----CceeEEEeccCCHHHHHHHHHHHHH
Confidence 5789999999999999999999999999999998755443332222 1 4567899999999999888775
Q ss_pred --CCCCEEEEcccccc------hhhhhcChHHHHHHhHHHHHHHHHHHHHc----CCC-EEEEeccccccCCCCCCCccC
Q 019795 80 --QKFEAVIHFGALKA------VAESVQHPFRYFDNNLIGTINLYQAMAKY----NCK-KLVFSSSATIYGQPEKIPCVE 146 (335)
Q Consensus 80 --~~~d~vi~~a~~~~------~~~~~~~~~~~~~~nv~~~~~l~~~~~~~----~~~-~~v~~Ss~~vyg~~~~~~~~e 146 (335)
..+|++||+||... ...+.++++..+++|+.++..+++++... +.+ ++|++||.....
T Consensus 76 ~~g~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~~~--------- 146 (520)
T PRK06484 76 EFGRIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASGAGLV--------- 146 (520)
T ss_pred HhCCCCEEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCcccCC---------
Confidence 47999999998721 12345567789999999999999986543 333 899999965431
Q ss_pred CCCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 147 DFPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 147 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
+......|+.+|...+.+++.++.+. .++++.++.|+.+-.+
T Consensus 147 --~~~~~~~Y~asKaal~~l~~~la~e~~~~~i~v~~i~Pg~v~t~ 190 (520)
T PRK06484 147 --ALPKRTAYSASKAAVISLTRSLACEWAAKGIRVNAVLPGYVRTQ 190 (520)
T ss_pred --CCCCCchHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCcCch
Confidence 12234579999999999999888774 2789999999987554
|
|
| >PRK05599 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=2.8e-16 Score=136.39 Aligned_cols=170 Identities=16% Similarity=0.138 Sum_probs=124.4
Q ss_pred CeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc-----
Q 019795 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS----- 79 (335)
Q Consensus 5 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~----- 79 (335)
|+++||||++.||.++++.|+ +|++|++++|+.....+..+++.+... ..+.++.+|++|.++++++++.
T Consensus 1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~~----~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 75 (246)
T PRK05599 1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRGA----TSVHVLSFDAQDLDTHRELVKQTQELA 75 (246)
T ss_pred CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhccC----CceEEEEcccCCHHHHHHHHHHHHHhc
Confidence 579999999999999999998 599999999987665555555543211 3477899999999998887764
Q ss_pred CCCCEEEEcccccchh----hhhcChHHHHHHhHHHHHHHHHHH----HHcC-CCEEEEeccccccCCCCCCCccCCCCC
Q 019795 80 QKFEAVIHFGALKAVA----ESVQHPFRYFDNNLIGTINLYQAM----AKYN-CKKLVFSSSATIYGQPEKIPCVEDFPY 150 (335)
Q Consensus 80 ~~~d~vi~~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~----~~~~-~~~~v~~Ss~~vyg~~~~~~~~e~~~~ 150 (335)
.++|++||+||..... ........++.+|+.+...+++.+ .+.+ -+++|++||...+- +.
T Consensus 76 g~id~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~-----------~~ 144 (246)
T PRK05599 76 GEISLAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIAGWR-----------AR 144 (246)
T ss_pred CCCCEEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEecccccc-----------CC
Confidence 4799999999974321 122233456778888887766553 3332 36899999965331 22
Q ss_pred CCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 151 GAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 151 ~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
.....|+.+|...+.+++.++.+. .++.+.++.|+.+..+
T Consensus 145 ~~~~~Y~asKaa~~~~~~~la~el~~~~I~v~~v~PG~v~T~ 186 (246)
T PRK05599 145 RANYVYGSTKAGLDAFCQGLADSLHGSHVRLIIARPGFVIGS 186 (246)
T ss_pred cCCcchhhHHHHHHHHHHHHHHHhcCCCceEEEecCCcccch
Confidence 234579999999999999888774 3688888888877543
|
|
| >PRK08862 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=3.3e-16 Score=134.11 Aligned_cols=170 Identities=11% Similarity=0.047 Sum_probs=127.0
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
+++|+++||||++.||++++++|+++|++|++++|+.....+..+++.+. ..++..+.+|++|+++++++++.
T Consensus 3 ~~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~ 77 (227)
T PRK08862 3 IKSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSAL-----TDNVYSFQLKDFSQESIRHLFDAIE 77 (227)
T ss_pred CCCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc-----CCCeEEEEccCCCHHHHHHHHHHHH
Confidence 45789999999999999999999999999999999776655555444332 14577888999999999887763
Q ss_pred ---C-CCCEEEEcccccch-----hhhhcChHHHHHHhHHHHHHHHHHHH----HcC-CCEEEEeccccccCCCCCCCcc
Q 019795 80 ---Q-KFEAVIHFGALKAV-----AESVQHPFRYFDNNLIGTINLYQAMA----KYN-CKKLVFSSSATIYGQPEKIPCV 145 (335)
Q Consensus 80 ---~-~~d~vi~~a~~~~~-----~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~-~~~~v~~Ss~~vyg~~~~~~~~ 145 (335)
. ++|++||+||.... ..+.+++...+++|+.++..+++.+. +.+ -+.+|++||...+
T Consensus 78 ~~~g~~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~--------- 148 (227)
T PRK08862 78 QQFNRAPDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVISHDDH--------- 148 (227)
T ss_pred HHhCCCCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEecCCCC---------
Confidence 3 79999999974221 11223445677889888887776543 332 3589999984321
Q ss_pred CCCCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 146 EDFPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 146 e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
.+...|+.+|...+.+++.++.+. .++++..+.|+.+-..
T Consensus 149 -----~~~~~Y~asKaal~~~~~~la~el~~~~Irvn~v~PG~i~t~ 190 (227)
T PRK08862 149 -----QDLTGVESSNALVSGFTHSWAKELTPFNIRVGGVVPSIFSAN 190 (227)
T ss_pred -----CCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcCcCC
Confidence 124579999999999999888763 2799999999877554
|
|
| >smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain | Back alignment and domain information |
|---|
Probab=99.72 E-value=3.3e-16 Score=128.40 Aligned_cols=167 Identities=17% Similarity=0.205 Sum_probs=122.0
Q ss_pred CeEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc----
Q 019795 5 KNILVTGGAGFIGTHCALQLLQGGF-KVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS---- 79 (335)
Q Consensus 5 ~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~---- 79 (335)
++++||||+|+||.++++.|+++|+ .|++++|++.........+..... ...++.++.+|+++++++.++++.
T Consensus 1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 78 (180)
T smart00822 1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEA--LGAEVTVVACDVADRAALAAALAAIPAR 78 (180)
T ss_pred CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHh--cCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 5799999999999999999999986 678788865543322111111110 124677899999999888887664
Q ss_pred -CCCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccc-cCCCCCCCccCCCCCCCC
Q 019795 80 -QKFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATI-YGQPEKIPCVEDFPYGAM 153 (335)
Q Consensus 80 -~~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~v-yg~~~~~~~~e~~~~~~~ 153 (335)
..+|.|||+|+.... ..+.++++.++++|+.++.++++++.+.+.+++|++||... ++ ....
T Consensus 79 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ii~~ss~~~~~~------------~~~~ 146 (180)
T smart00822 79 LGPLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRDLPLDFFVLFSSVAGVLG------------NPGQ 146 (180)
T ss_pred cCCeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhccCCcceEEEEccHHHhcC------------CCCc
Confidence 357999999986422 22335567889999999999999998777788999998543 32 2234
Q ss_pred ChhHHhHHHHHHHHHHHHhhCCCCeEEEEecccc
Q 019795 154 NPYGRTKQWCEEIAFDVQKADPEWRIILLRYFNP 187 (335)
Q Consensus 154 ~~Y~~sK~~~E~~~~~~~~~~~~~~~~~lR~~~v 187 (335)
..|+.+|...+.+++.... . +++++.+.|+.+
T Consensus 147 ~~y~~sk~~~~~~~~~~~~-~-~~~~~~~~~g~~ 178 (180)
T smart00822 147 ANYAAANAFLDALAAHRRA-R-GLPATSINWGAW 178 (180)
T ss_pred hhhHHHHHHHHHHHHHHHh-c-CCceEEEeeccc
Confidence 5799999999999865543 3 888888877643
|
It uses NADPH to reduce the keto group to a hydroxy group. |
| >PRK07578 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=3.9e-16 Score=131.01 Aligned_cols=149 Identities=17% Similarity=0.126 Sum_probs=117.9
Q ss_pred CeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcC-CCC
Q 019795 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQ-KFE 83 (335)
Q Consensus 5 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~-~~d 83 (335)
|+++||||+|+||++++++|+++ ++|++++|+.. .+.+|++|+++++++++.. ++|
T Consensus 1 ~~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~----------------------~~~~D~~~~~~~~~~~~~~~~id 57 (199)
T PRK07578 1 MKILVIGASGTIGRAVVAELSKR-HEVITAGRSSG----------------------DVQVDITDPASIRALFEKVGKVD 57 (199)
T ss_pred CeEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC----------------------ceEecCCChHHHHHHHHhcCCCC
Confidence 48999999999999999999999 99999987521 3678999999999988863 799
Q ss_pred EEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHHHHc--CCCEEEEeccccccCCCCCCCccCCCCCCCCChhH
Q 019795 84 AVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAMAKY--NCKKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYG 157 (335)
Q Consensus 84 ~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~Y~ 157 (335)
++||+||.... ..+.+++.+.+++|+.++.++++++... +..+++++||.... .+......|+
T Consensus 58 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~iss~~~~-----------~~~~~~~~Y~ 126 (199)
T PRK07578 58 AVVSAAGKVHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDGGSFTLTSGILSD-----------EPIPGGASAA 126 (199)
T ss_pred EEEECCCCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcccccC-----------CCCCCchHHH
Confidence 99999996432 1234566788999999999999987653 23579999885532 1233446799
Q ss_pred HhHHHHHHHHHHHHhhC-CCCeEEEEecccc
Q 019795 158 RTKQWCEEIAFDVQKAD-PEWRIILLRYFNP 187 (335)
Q Consensus 158 ~sK~~~E~~~~~~~~~~-~~~~~~~lR~~~v 187 (335)
.+|...+.+++.++.++ .++++..++|+.+
T Consensus 127 ~sK~a~~~~~~~la~e~~~gi~v~~i~Pg~v 157 (199)
T PRK07578 127 TVNGALEGFVKAAALELPRGIRINVVSPTVL 157 (199)
T ss_pred HHHHHHHHHHHHHHHHccCCeEEEEEcCCcc
Confidence 99999999999888764 3788999999765
|
|
| >PLN00015 protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=99.72 E-value=2e-16 Score=141.83 Aligned_cols=177 Identities=14% Similarity=0.071 Sum_probs=125.1
Q ss_pred EEEcCCChhhHHHHHHHHhCC-CeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc-----CC
Q 019795 8 LVTGGAGFIGTHCALQLLQGG-FKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-----QK 81 (335)
Q Consensus 8 lItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-----~~ 81 (335)
+||||+++||.+++++|+++| ++|++++|+..........+.. ....+.++.+|++|.++++++++. ..
T Consensus 1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~-----~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~ 75 (308)
T PLN00015 1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGM-----PKDSYTVMHLDLASLDSVRQFVDNFRRSGRP 75 (308)
T ss_pred CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcC-----CCCeEEEEEecCCCHHHHHHHHHHHHhcCCC
Confidence 699999999999999999999 9999999875543333333221 114678889999999998887763 36
Q ss_pred CCEEEEcccccch-----hhhhcChHHHHHHhHHHHHHHHHHHHH----cC--CCEEEEeccccccCCCC---CCC---c
Q 019795 82 FEAVIHFGALKAV-----AESVQHPFRYFDNNLIGTINLYQAMAK----YN--CKKLVFSSSATIYGQPE---KIP---C 144 (335)
Q Consensus 82 ~d~vi~~a~~~~~-----~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~--~~~~v~~Ss~~vyg~~~---~~~---~ 144 (335)
+|++||+||.... ..+.+.++.++++|+.|+..+++.+.. .+ .++||++||...+-... ..+ .
T Consensus 76 iD~lInnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~ 155 (308)
T PLN00015 76 LDVLVCNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGSITGNTNTLAGNVPPKANL 155 (308)
T ss_pred CCEEEECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccCCCccch
Confidence 8999999997421 123456678999999999998887543 33 36999999965431100 000 0
Q ss_pred ----------c-C-------CCCCCCCChhHHhHHHHHHHHHHHHhhC---CCCeEEEEecccccC
Q 019795 145 ----------V-E-------DFPYGAMNPYGRTKQWCEEIAFDVQKAD---PEWRIILLRYFNPVG 189 (335)
Q Consensus 145 ----------~-e-------~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~~lR~~~v~G 189 (335)
. + .....+...|+.||.+.+.+++.+++++ .++.+.++.||.|..
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~ 221 (308)
T PLN00015 156 GDLRGLAGGLNGLNSSAMIDGGEFDGAKAYKDSKVCNMLTMQEFHRRYHEETGITFASLYPGCIAT 221 (308)
T ss_pred hhhhhhhcccCCccchhhccccCCcHHHHHhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccC
Confidence 0 0 0122345679999999777778777764 378999999998854
|
|
| >KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.72 E-value=3.5e-16 Score=138.48 Aligned_cols=185 Identities=20% Similarity=0.096 Sum_probs=142.5
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
+.+++++|||||.+||.++++.|+.+|.+|+..+|+.....++.+.+.+.. ....+.++.+|+++.++++++.+.
T Consensus 33 ~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~---~~~~i~~~~lDLssl~SV~~fa~~~~ 109 (314)
T KOG1208|consen 33 LSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGK---ANQKIRVIQLDLSSLKSVRKFAEEFK 109 (314)
T ss_pred CCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcC---CCCceEEEECCCCCHHHHHHHHHHHH
Confidence 356899999999999999999999999999999999877777777776522 236788899999999999887764
Q ss_pred ---CCCCEEEEcccccchhh--hhcChHHHHHHhHHHHHHHHHHHHH----cCCCEEEEeccccccCCC--CCCCccCCC
Q 019795 80 ---QKFEAVIHFGALKAVAE--SVQHPFRYFDNNLIGTINLYQAMAK----YNCKKLVFSSSATIYGQP--EKIPCVEDF 148 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~~~~--~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~v~~Ss~~vyg~~--~~~~~~e~~ 148 (335)
...|++||+||+..... ..+..+..+.+|..|...+.+.+.. ....|||++||..- +.. -...-.|..
T Consensus 110 ~~~~~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS~~~-~~~~~~~~l~~~~~ 188 (314)
T KOG1208|consen 110 KKEGPLDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSSILG-GGKIDLKDLSGEKA 188 (314)
T ss_pred hcCCCccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcCccc-cCccchhhccchhc
Confidence 47899999999864433 3456789999999999998888543 33369999999554 111 111112222
Q ss_pred C-CCCCChhHHhHHHHHHHHHHHHhhCC-CCeEEEEecccccCC
Q 019795 149 P-YGAMNPYGRTKQWCEEIAFDVQKADP-EWRIILLRYFNPVGA 190 (335)
Q Consensus 149 ~-~~~~~~Y~~sK~~~E~~~~~~~~~~~-~~~~~~lR~~~v~G~ 190 (335)
. +.....|+.||.+...++.+++++.+ ++.+..+.||.+...
T Consensus 189 ~~~~~~~~Y~~SKla~~l~~~eL~k~l~~~V~~~~~hPG~v~t~ 232 (314)
T KOG1208|consen 189 KLYSSDAAYALSKLANVLLANELAKRLKKGVTTYSVHPGVVKTT 232 (314)
T ss_pred cCccchhHHHHhHHHHHHHHHHHHHHhhcCceEEEECCCccccc
Confidence 1 22233599999999999999998875 789999999988765
|
|
| >PRK12367 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=4.5e-16 Score=134.72 Aligned_cols=161 Identities=16% Similarity=0.153 Sum_probs=109.5
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCC
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQK 81 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~ 81 (335)
+++|+++||||+|+||++++++|+++|++|++++|+...... .. .. .....+.+|++|.+++.+.+. +
T Consensus 12 l~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~---~~---~~----~~~~~~~~D~~~~~~~~~~~~--~ 79 (245)
T PRK12367 12 WQGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSE---SN---DE----SPNEWIKWECGKEESLDKQLA--S 79 (245)
T ss_pred hCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhh---hh---cc----CCCeEEEeeCCCHHHHHHhcC--C
Confidence 357899999999999999999999999999999987522111 10 00 122568899999999998886 7
Q ss_pred CCEEEEcccccch-hhhhcChHHHHHHhHHHHHHHHHHHHHc-------CCCEEEEeccccccCCCCCCCccCCCCCCCC
Q 019795 82 FEAVIHFGALKAV-AESVQHPFRYFDNNLIGTINLYQAMAKY-------NCKKLVFSSSATIYGQPEKIPCVEDFPYGAM 153 (335)
Q Consensus 82 ~d~vi~~a~~~~~-~~~~~~~~~~~~~nv~~~~~l~~~~~~~-------~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~ 153 (335)
+|++|||||.... ..+.++++..+++|+.++.++++++... +...++..||.+... + ...
T Consensus 80 iDilVnnAG~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~g~~iiv~ss~a~~~-----------~-~~~ 147 (245)
T PRK12367 80 LDVLILNHGINPGGRQDPENINKALEINALSSWRLLELFEDIALNNNSQIPKEIWVNTSEAEIQ-----------P-ALS 147 (245)
T ss_pred CCEEEECCccCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccCCCeEEEEEecccccC-----------C-CCC
Confidence 9999999997432 2235667889999999999999986542 112343444433221 1 123
Q ss_pred ChhHHhHHHHHHHHHHHHh----h--CCCCeEEEEecccc
Q 019795 154 NPYGRTKQWCEEIAFDVQK----A--DPEWRIILLRYFNP 187 (335)
Q Consensus 154 ~~Y~~sK~~~E~~~~~~~~----~--~~~~~~~~lR~~~v 187 (335)
..|+.||...+.+. .+.+ + ..++.+..+.|+.+
T Consensus 148 ~~Y~aSKaal~~~~-~l~~~l~~e~~~~~i~v~~~~pg~~ 186 (245)
T PRK12367 148 PSYEISKRLIGQLV-SLKKNLLDKNERKKLIIRKLILGPF 186 (245)
T ss_pred chhHHHHHHHHHHH-HHHHHHHHhhcccccEEEEecCCCc
Confidence 46999999876443 2222 1 12666666666543
|
|
| >TIGR01500 sepiapter_red sepiapterin reductase | Back alignment and domain information |
|---|
Probab=99.71 E-value=3.2e-16 Score=136.89 Aligned_cols=170 Identities=16% Similarity=0.104 Sum_probs=125.7
Q ss_pred eEEEEcCCChhhHHHHHHHHh----CCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcC-
Q 019795 6 NILVTGGAGFIGTHCALQLLQ----GGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQ- 80 (335)
Q Consensus 6 ~vlItGatG~iG~~l~~~L~~----~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~- 80 (335)
.++||||+++||.+++++|++ .|++|++++|+........+.+.... .+..+.++.+|++|.++++++++..
T Consensus 2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~~~~---~~~~v~~~~~Dl~~~~~v~~~~~~~~ 78 (256)
T TIGR01500 2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAER---SGLRVVRVSLDLGAEAGLEQLLKALR 78 (256)
T ss_pred EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHHhcC---CCceEEEEEeccCCHHHHHHHHHHHH
Confidence 689999999999999999997 79999999997665555544443211 1246888999999999888776531
Q ss_pred --------CCCEEEEcccccch----h---hhhcChHHHHHHhHHHHHHHHHHHHHc-----C-CCEEEEeccccccCCC
Q 019795 81 --------KFEAVIHFGALKAV----A---ESVQHPFRYFDNNLIGTINLYQAMAKY-----N-CKKLVFSSSATIYGQP 139 (335)
Q Consensus 81 --------~~d~vi~~a~~~~~----~---~~~~~~~~~~~~nv~~~~~l~~~~~~~-----~-~~~~v~~Ss~~vyg~~ 139 (335)
+.|++||+||.... . ...+.++..+++|+.++..+++++... + .+++|++||...+.
T Consensus 79 ~~~g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~isS~~~~~-- 156 (256)
T TIGR01500 79 ELPRPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLCAIQ-- 156 (256)
T ss_pred hccccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEECCHHhCC--
Confidence 13699999996321 1 123456689999999999988876432 2 25899999976431
Q ss_pred CCCCccCCCCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccC
Q 019795 140 EKIPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVG 189 (335)
Q Consensus 140 ~~~~~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G 189 (335)
+......|+.+|...+.+++.++.+. .++.+.++.|+.+-.
T Consensus 157 ---------~~~~~~~Y~asKaal~~l~~~la~e~~~~~i~v~~v~PG~v~T 199 (256)
T TIGR01500 157 ---------PFKGWALYCAGKAARDMLFQVLALEEKNPNVRVLNYAPGVLDT 199 (256)
T ss_pred ---------CCCCchHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCCcccc
Confidence 22334579999999999999888774 368888898887643
|
This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs. |
| >KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.4e-15 Score=132.72 Aligned_cols=178 Identities=23% Similarity=0.186 Sum_probs=136.2
Q ss_pred CCCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc-
Q 019795 1 MASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS- 79 (335)
Q Consensus 1 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~- 79 (335)
++.+|++||||++..||+++++.|++.|++|++.+|+..........+...... .+++..+.+|++++++++++++.
T Consensus 5 ~l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~~~~l~~~~ 82 (270)
T KOG0725|consen 5 RLAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYT--GGKVLAIVCDVSKEVDVEKLVEFA 82 (270)
T ss_pred cCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCC--CCeeEEEECcCCCHHHHHHHHHHH
Confidence 367899999999999999999999999999999999877766655555433221 35688999999998887766653
Q ss_pred -----CCCCEEEEcccccc-----hhhhhcChHHHHHHhHHH-HHHHHHHHHH----cCCCEEEEeccccccCCCCCCCc
Q 019795 80 -----QKFEAVIHFGALKA-----VAESVQHPFRYFDNNLIG-TINLYQAMAK----YNCKKLVFSSSATIYGQPEKIPC 144 (335)
Q Consensus 80 -----~~~d~vi~~a~~~~-----~~~~~~~~~~~~~~nv~~-~~~l~~~~~~----~~~~~~v~~Ss~~vyg~~~~~~~ 144 (335)
+++|++||+||... ...+.+.++.++++|+.| ...+.+++.. .+-..++++||...+...
T Consensus 83 ~~~~~GkidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~gg~I~~~ss~~~~~~~----- 157 (270)
T KOG0725|consen 83 VEKFFGKIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSKGGSIVNISSVAGVGPG----- 157 (270)
T ss_pred HHHhCCCCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcCCceEEEEeccccccCC-----
Confidence 47999999999743 344677888999999995 6666666543 234578888886543211
Q ss_pred cCCCCCCCCChhHHhHHHHHHHHHHHHhhCC--CCeEEEEecccccCC
Q 019795 145 VEDFPYGAMNPYGRTKQWCEEIAFDVQKADP--EWRIILLRYFNPVGA 190 (335)
Q Consensus 145 ~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~--~~~~~~lR~~~v~G~ 190 (335)
+..+ ..|+.+|...+++.+..+.++. ++++.++-|+.|..+
T Consensus 158 ----~~~~-~~Y~~sK~al~~ltr~lA~El~~~gIRvN~v~PG~i~T~ 200 (270)
T KOG0725|consen 158 ----PGSG-VAYGVSKAALLQLTRSLAKELAKHGIRVNSVSPGLVKTS 200 (270)
T ss_pred ----CCCc-ccchhHHHHHHHHHHHHHHHHhhcCcEEEEeecCcEeCC
Confidence 1122 5899999999999999887742 789999999888766
|
|
| >PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.4e-15 Score=139.47 Aligned_cols=159 Identities=16% Similarity=0.163 Sum_probs=109.8
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCC
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQK 81 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~ 81 (335)
+++|+|+||||+|+||++++++|+++|++|++++|++..... ..... ...+..+.+|++|++++.+.+. +
T Consensus 176 l~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~---~~~~~-----~~~v~~v~~Dvsd~~~v~~~l~--~ 245 (406)
T PRK07424 176 LKGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITL---EINGE-----DLPVKTLHWQVGQEAALAELLE--K 245 (406)
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH---HHhhc-----CCCeEEEEeeCCCHHHHHHHhC--C
Confidence 467999999999999999999999999999999986543221 11110 1246678899999999999887 7
Q ss_pred CCEEEEcccccch-hhhhcChHHHHHHhHHHHHHHHHHHHH----cCC----CEEEEeccccccCCCCCCCccCCCCCCC
Q 019795 82 FEAVIHFGALKAV-AESVQHPFRYFDNNLIGTINLYQAMAK----YNC----KKLVFSSSATIYGQPEKIPCVEDFPYGA 152 (335)
Q Consensus 82 ~d~vi~~a~~~~~-~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~----~~~v~~Ss~~vyg~~~~~~~~e~~~~~~ 152 (335)
+|++||+||.... ..+.++++..+++|+.++.++++++.. .+. ..+|++|++.. ....
T Consensus 246 IDiLInnAGi~~~~~~s~e~~~~~~~vNv~g~i~Li~a~lp~m~~~~~~~~~~iiVn~Ssa~~-------------~~~~ 312 (406)
T PRK07424 246 VDILIINHGINVHGERTPEAINKSYEVNTFSAWRLMELFFTTVKTNRDKATKEVWVNTSEAEV-------------NPAF 312 (406)
T ss_pred CCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEccccc-------------cCCC
Confidence 9999999987432 223456678999999999999998643 221 23455554221 1111
Q ss_pred CChhHHhHHHHHHHHHHHHhhCCCCeEEEEec
Q 019795 153 MNPYGRTKQWCEEIAFDVQKADPEWRIILLRY 184 (335)
Q Consensus 153 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~lR~ 184 (335)
...|+.||.+.+.+.. ..+...+..+..+.|
T Consensus 313 ~~~Y~ASKaAl~~l~~-l~~~~~~~~I~~i~~ 343 (406)
T PRK07424 313 SPLYELSKRALGDLVT-LRRLDAPCVVRKLIL 343 (406)
T ss_pred chHHHHHHHHHHHHHH-HHHhCCCCceEEEEe
Confidence 2469999999988764 333222444444433
|
|
| >COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.69 E-value=7e-15 Score=129.54 Aligned_cols=213 Identities=19% Similarity=0.212 Sum_probs=156.4
Q ss_pred CeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCCCE
Q 019795 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKFEA 84 (335)
Q Consensus 5 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~d~ 84 (335)
++||||||||++|++++++|+++|++|+++.|++....... .++.+..+|+.+...+...++ +.|.
T Consensus 1 ~~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~~------------~~v~~~~~d~~~~~~l~~a~~--G~~~ 66 (275)
T COG0702 1 MKILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAALA------------GGVEVVLGDLRDPKSLVAGAK--GVDG 66 (275)
T ss_pred CeEEEEecccchHHHHHHHHHhCCCEEEEEEeCHHHHHhhc------------CCcEEEEeccCCHhHHHHHhc--cccE
Confidence 57999999999999999999999999999999866544322 468899999999999999999 8899
Q ss_pred EEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccCCCCCCCccCCCCCCCCChhHHhHHHHH
Q 019795 85 VIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQWCE 164 (335)
Q Consensus 85 vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~Y~~sK~~~E 164 (335)
++++.+... ... ...........+..+++. .++++++++|....- ......|..+|...|
T Consensus 67 ~~~i~~~~~-~~~-----~~~~~~~~~~~~~a~~a~-~~~~~~~~~s~~~~~-------------~~~~~~~~~~~~~~e 126 (275)
T COG0702 67 VLLISGLLD-GSD-----AFRAVQVTAVVRAAEAAG-AGVKHGVSLSVLGAD-------------AASPSALARAKAAVE 126 (275)
T ss_pred EEEEecccc-ccc-----chhHHHHHHHHHHHHHhc-CCceEEEEeccCCCC-------------CCCccHHHHHHHHHH
Confidence 998877643 111 122223344444555444 446788888875531 133457999999999
Q ss_pred HHHHHHHhhCCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHHHhCCCCceeEecccCCCCCCceeeeeeeHh
Q 019795 165 EIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAVRDYIHVM 244 (335)
Q Consensus 165 ~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~v~~~ 244 (335)
..+.+. +++.+++|+..+|..... .....+.....+.+. . +....+++..+
T Consensus 127 ~~l~~s-----g~~~t~lr~~~~~~~~~~---------------~~~~~~~~~~~~~~~-~--------~~~~~~~i~~~ 177 (275)
T COG0702 127 AALRSS-----GIPYTTLRRAAFYLGAGA---------------AFIEAAEAAGLPVIP-R--------GIGRLSPIAVD 177 (275)
T ss_pred HHHHhc-----CCCeEEEecCeeeeccch---------------hHHHHHHhhCCceec-C--------CCCceeeeEHH
Confidence 998764 899899997776664211 113344444444222 2 22268899999
Q ss_pred hhhc-----------cCceEEecCCccccHHHHHHHHHHHhCCCCCc
Q 019795 245 DLAD-----------GCIAYNLGNGKGISVLEMVAAFEKASGKKIPI 280 (335)
Q Consensus 245 D~~~-----------~~~~~nv~~~~~~s~~el~~~i~~~~g~~~~~ 280 (335)
|++. .+++|.+++++..+..++.+.+.+..|++..+
T Consensus 178 d~a~~~~~~l~~~~~~~~~~~l~g~~~~~~~~~~~~l~~~~gr~~~~ 224 (275)
T COG0702 178 DVAEALAAALDAPATAGRTYELAGPEALTLAELASGLDYTIGRPVGL 224 (275)
T ss_pred HHHHHHHHHhcCCcccCcEEEccCCceecHHHHHHHHHHHhCCccee
Confidence 9987 46899999889999999999999999988766
|
|
| >PLN02730 enoyl-[acyl-carrier-protein] reductase | Back alignment and domain information |
|---|
Probab=99.69 E-value=2.2e-15 Score=133.72 Aligned_cols=177 Identities=10% Similarity=-0.040 Sum_probs=124.9
Q ss_pred CCCCeEEEEcC--CChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhh--------cCCccccceeEEEccC--CC
Q 019795 2 ASEKNILVTGG--AGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDL--------AGPELAKKLEFHVGDL--RN 69 (335)
Q Consensus 2 ~~~~~vlItGa--tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~--------~~~~~~~~i~~~~~Dl--~d 69 (335)
+++|++||||| +.+||.++++.|++.|++|++ +|.....+.....+... ...........+.+|+ .+
T Consensus 7 l~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~ 85 (303)
T PLN02730 7 LRGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDAVFDT 85 (303)
T ss_pred CCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeecceecCc
Confidence 46899999999 899999999999999999988 66666555544433321 0000001135678888 33
Q ss_pred H------------------HHHHHHHhc-----CCCCEEEEccccc------chhhhhcChHHHHHHhHHHHHHHHHHHH
Q 019795 70 K------------------DDLDKLFSS-----QKFEAVIHFGALK------AVAESVQHPFRYFDNNLIGTINLYQAMA 120 (335)
Q Consensus 70 ~------------------~~~~~~~~~-----~~~d~vi~~a~~~------~~~~~~~~~~~~~~~nv~~~~~l~~~~~ 120 (335)
+ +++.++++. .++|++|||||.. ....+.++++.++++|+.++..+++++.
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~l~~~~~ 165 (303)
T PLN02730 86 PEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLLQHFG 165 (303)
T ss_pred cccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence 2 256666654 4799999999642 1233456778899999999999999865
Q ss_pred Hc--CCCEEEEeccccccCCCCCCCccCCCCCCCC-ChhHHhHHHHHHHHHHHHhhC---CCCeEEEEecccccCC
Q 019795 121 KY--NCKKLVFSSSATIYGQPEKIPCVEDFPYGAM-NPYGRTKQWCEEIAFDVQKAD---PEWRIILLRYFNPVGA 190 (335)
Q Consensus 121 ~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~-~~Y~~sK~~~E~~~~~~~~~~---~~~~~~~lR~~~v~G~ 190 (335)
.. .-.++|++||....- +.... ..|+.||...+.+.+.++.+. .++++.++-|+.+-.+
T Consensus 166 p~m~~~G~II~isS~a~~~-----------~~p~~~~~Y~asKaAl~~l~~~la~El~~~~gIrVn~V~PG~v~T~ 230 (303)
T PLN02730 166 PIMNPGGASISLTYIASER-----------IIPGYGGGMSSAKAALESDTRVLAFEAGRKYKIRVNTISAGPLGSR 230 (303)
T ss_pred HHHhcCCEEEEEechhhcC-----------CCCCCchhhHHHHHHHHHHHHHHHHHhCcCCCeEEEEEeeCCccCc
Confidence 43 126899999865421 11212 369999999999999999875 2689999999877443
|
|
| >PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=2.1e-15 Score=142.38 Aligned_cols=166 Identities=18% Similarity=0.079 Sum_probs=124.2
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc---
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS--- 79 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~--- 79 (335)
++++++||||+|+||.++++.|+++|++|+++++.... +....+.+. -+...+.+|++|.+++.++++.
T Consensus 209 ~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~--~~l~~~~~~------~~~~~~~~Dv~~~~~~~~~~~~~~~ 280 (450)
T PRK08261 209 AGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAG--EALAAVANR------VGGTALALDITAPDAPARIAEHLAE 280 (450)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccH--HHHHHHHHH------cCCeEEEEeCCCHHHHHHHHHHHHH
Confidence 57899999999999999999999999999999874321 112222211 1235788999999988887764
Q ss_pred --CCCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHHHHcC----CCEEEEeccccccCCCCCCCccCCCC
Q 019795 80 --QKFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAMAKYN----CKKLVFSSSATIYGQPEKIPCVEDFP 149 (335)
Q Consensus 80 --~~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~~~----~~~~v~~Ss~~vyg~~~~~~~~e~~~ 149 (335)
.++|+|||+|+.... ..+.+.++..+++|+.++.++++++.... .++||++||...+. +
T Consensus 281 ~~g~id~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS~~~~~-----------g 349 (450)
T PRK08261 281 RHGGLDIVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSSISGIA-----------G 349 (450)
T ss_pred hCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECChhhcC-----------C
Confidence 268999999997432 22345667889999999999999987632 26899999965431 1
Q ss_pred CCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccc
Q 019795 150 YGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNP 187 (335)
Q Consensus 150 ~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v 187 (335)
......|+.+|...+.+++.++.+. .++.+.++.|+.+
T Consensus 350 ~~~~~~Y~asKaal~~~~~~la~el~~~gi~v~~v~PG~i 389 (450)
T PRK08261 350 NRGQTNYAASKAGVIGLVQALAPLLAERGITINAVAPGFI 389 (450)
T ss_pred CCCChHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeCcC
Confidence 2234689999998888888776552 2789999999875
|
|
| >PRK09009 C factor cell-cell signaling protein; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=8.8e-15 Score=126.03 Aligned_cols=165 Identities=16% Similarity=0.165 Sum_probs=118.0
Q ss_pred CeEEEEcCCChhhHHHHHHHHhCC--CeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc-CC
Q 019795 5 KNILVTGGAGFIGTHCALQLLQGG--FKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-QK 81 (335)
Q Consensus 5 ~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-~~ 81 (335)
|+|+||||+|+||++++++|+++| +.|+...|..... .. ..++.++.+|++|.++++++.+. .+
T Consensus 1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~------~~-------~~~~~~~~~Dls~~~~~~~~~~~~~~ 67 (235)
T PRK09009 1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKPD------FQ-------HDNVQWHALDVTDEAEIKQLSEQFTQ 67 (235)
T ss_pred CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCccc------cc-------cCceEEEEecCCCHHHHHHHHHhcCC
Confidence 589999999999999999999985 5555555543211 00 14678899999999988876654 37
Q ss_pred CCEEEEcccccchh----------hhhcChHHHHHHhHHHHHHHHHHHHHc----CCCEEEEeccccccCCCCCCCccCC
Q 019795 82 FEAVIHFGALKAVA----------ESVQHPFRYFDNNLIGTINLYQAMAKY----NCKKLVFSSSATIYGQPEKIPCVED 147 (335)
Q Consensus 82 ~d~vi~~a~~~~~~----------~~~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~~v~~Ss~~vyg~~~~~~~~e~ 147 (335)
+|+|||+||..... .+.+.+...+.+|+.++..+++.+... +..+++++||.. |....
T Consensus 68 id~li~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~~~i~~iss~~--~~~~~------ 139 (235)
T PRK09009 68 LDWLINCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSESAKFAVISAKV--GSISD------ 139 (235)
T ss_pred CCEEEECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccCCceEEEEeecc--ccccc------
Confidence 99999999975321 112335578999999999988886542 345888988732 11100
Q ss_pred CCCCCCChhHHhHHHHHHHHHHHHhhC----CCCeEEEEecccccCC
Q 019795 148 FPYGAMNPYGRTKQWCEEIAFDVQKAD----PEWRIILLRYFNPVGA 190 (335)
Q Consensus 148 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~----~~~~~~~lR~~~v~G~ 190 (335)
.+..+...|+.+|...+.+++.++.+. +++.+..+.|+.+..+
T Consensus 140 ~~~~~~~~Y~asK~a~~~~~~~la~e~~~~~~~i~v~~v~PG~v~t~ 186 (235)
T PRK09009 140 NRLGGWYSYRASKAALNMFLKTLSIEWQRSLKHGVVLALHPGTTDTA 186 (235)
T ss_pred CCCCCcchhhhhHHHHHHHHHHHHHHhhcccCCeEEEEEcccceecC
Confidence 112344589999999999999888652 3788888999887554
|
|
| >KOG3019 consensus Predicted nucleoside-diphosphate sugar epimerase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.63 E-value=3.5e-15 Score=121.32 Aligned_cols=269 Identities=17% Similarity=0.110 Sum_probs=167.5
Q ss_pred CCeEEEEcCCChhhHHHHH-----HHHhCC----CeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHH-HH
Q 019795 4 EKNILVTGGAGFIGTHCAL-----QLLQGG----FKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKD-DL 73 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~-----~L~~~g----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~-~~ 73 (335)
....++-+.+|+|+.+|.- .+-+.+ |+|++++|++.+.. +.+.+.|..-.- ++
T Consensus 12 sr~a~~~~~~g~i~~nl~~~~~~~H~t~~~~a~~h~vtv~sR~pg~~r-----------------itw~el~~~Gip~sc 74 (315)
T KOG3019|consen 12 SRDAVSNWSNGIIRENLGSETSCCHDTNVHSADNHAVTVLSRSPGKAR-----------------ITWPELDFPGIPISC 74 (315)
T ss_pred cccCCCCccccchhccccCcccccccCCCCcccccceEEEecCCCCcc-----------------cccchhcCCCCceeh
Confidence 4567888999999988876 333334 89999999877643 333333322100 11
Q ss_pred HHHHhcCCCCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcC--CCEEEEeccccccCCCCCCCccCCCCCC
Q 019795 74 DKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYN--CKKLVFSSSATIYGQPEKIPCVEDFPYG 151 (335)
Q Consensus 74 ~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~--~~~~v~~Ss~~vyg~~~~~~~~e~~~~~ 151 (335)
.+ .+..+.+++..+....+..--.++....+..+..++++...+- .+.+|.+|.+++|-.+....++|+++..
T Consensus 75 ~a-----~vna~g~n~l~P~rRWsp~fqkev~gSRi~~t~~la~aI~~aPq~~~~~Vlv~gva~y~pS~s~eY~e~~~~q 149 (315)
T KOG3019|consen 75 VA-----GVNAVGNNALLPIRRWSPEFQKEVKGSRIRVTSKLADAINNAPQEARPTVLVSGVAVYVPSESQEYSEKIVHQ 149 (315)
T ss_pred HH-----HHhhhhhhccCchhhcCHHHHHHhhcceeeHHHHHHHHHhcCCCCCCCeEEEEeeEEeccccccccccccccC
Confidence 11 1223334444432222211111333344455777888877663 3579999999999888888899998888
Q ss_pred CCChhHHhHHHHHHHHHHHHhhCCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHHHhCCCCceeEecccCCC
Q 019795 152 AMNPYGRTKQWCEEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPT 231 (335)
Q Consensus 152 ~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 231 (335)
..+....-...=|..++.. ....+.+++|.+.|.|.+. +....+.+.++.-+ |++ .|
T Consensus 150 gfd~~srL~l~WE~aA~~~---~~~~r~~~iR~GvVlG~gG---------Ga~~~M~lpF~~g~-GGP-----lG----- 206 (315)
T KOG3019|consen 150 GFDILSRLCLEWEGAALKA---NKDVRVALIRIGVVLGKGG---------GALAMMILPFQMGA-GGP-----LG----- 206 (315)
T ss_pred ChHHHHHHHHHHHHHhhcc---CcceeEEEEEEeEEEecCC---------cchhhhhhhhhhcc-CCc-----CC-----
Confidence 7764433333333333222 2268999999999999731 22233333333322 221 23
Q ss_pred CCCceeeeeeeHhhhhc----------cCceEEecCCccccHHHHHHHHHHHhCCCCCceeCCC-----C-CCccceeec
Q 019795 232 KDGSAVRDYIHVMDLAD----------GCIAYNLGNGKGISVLEMVAAFEKASGKKIPIKFCPR-----R-VGDATAVYA 295 (335)
Q Consensus 232 ~~~~~~~~~v~~~D~~~----------~~~~~nv~~~~~~s~~el~~~i~~~~g~~~~~~~~~~-----~-~~~~~~~~~ 295 (335)
+|++++.|||++|++. -.++.|-..+++++..|+++.+..+++++.-+ ..|. . ..+...+++
T Consensus 207 -sG~Q~fpWIHv~DL~~li~~ale~~~v~GViNgvAP~~~~n~Ef~q~lg~aL~Rp~~~-pvP~fvvqA~fG~erA~~vL 284 (315)
T KOG3019|consen 207 -SGQQWFPWIHVDDLVNLIYEALENPSVKGVINGVAPNPVRNGEFCQQLGSALSRPSWL-PVPDFVVQALFGPERATVVL 284 (315)
T ss_pred -CCCeeeeeeehHHHHHHHHHHHhcCCCCceecccCCCccchHHHHHHHHHHhCCCccc-CCcHHHHHHHhCccceeEEe
Confidence 8999999999999997 47799988999999999999999999976422 2221 0 012222333
Q ss_pred c-----HHHHHHhcCCcccc-CHHHHHHHHH
Q 019795 296 A-----TDKAHKELGWKPKY-GIEDMCAHQW 320 (335)
Q Consensus 296 d-----~~k~~~~Lg~~p~~-~~~~~~~~~~ 320 (335)
. ..|+ ..+||+++| .+.+++++.+
T Consensus 285 eGqKV~Pqra-l~~Gf~f~yp~vk~Al~~i~ 314 (315)
T KOG3019|consen 285 EGQKVLPQRA-LELGFEFKYPYVKDALRAIM 314 (315)
T ss_pred eCCcccchhH-hhcCceeechHHHHHHHHHh
Confidence 3 4455 589999999 5788887653
|
|
| >COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only] | Back alignment and domain information |
|---|
Probab=99.63 E-value=3.6e-14 Score=123.41 Aligned_cols=173 Identities=18% Similarity=0.136 Sum_probs=125.0
Q ss_pred CCCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCc-hhhHHhhhhhcCCccccceeEEEccCCC-HHHHHHHHh
Q 019795 1 MASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSV-PEAVDRVKDLAGPELAKKLEFHVGDLRN-KDDLDKLFS 78 (335)
Q Consensus 1 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~i~~~~~Dl~d-~~~~~~~~~ 78 (335)
|+++|+++||||++.||.++++.|++.|+.|+++.+..... .+.......... . ..+.+..+|+++ .+++..+++
T Consensus 2 ~~~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~Dvs~~~~~v~~~~~ 78 (251)
T COG1028 2 DLSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAG--G-GRAAAVAADVSDDEESVEALVA 78 (251)
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHHhcC--C-CcEEEEEecCCCCHHHHHHHHH
Confidence 56789999999999999999999999999988888765542 111111111000 0 257778899998 888777666
Q ss_pred c-----CCCCEEEEccccc-----chhhhhcChHHHHHHhHHHHHHHHHHHHHcC-CCEEEEeccccccCCCCCCCccCC
Q 019795 79 S-----QKFEAVIHFGALK-----AVAESVQHPFRYFDNNLIGTINLYQAMAKYN-CKKLVFSSSATIYGQPEKIPCVED 147 (335)
Q Consensus 79 ~-----~~~d~vi~~a~~~-----~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~v~~Ss~~vyg~~~~~~~~e~ 147 (335)
. +++|++||+||.. ....+.+.++..+.+|+.++..+.+.+...- .++||++||.... ...
T Consensus 79 ~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~Iv~isS~~~~-~~~------- 150 (251)
T COG1028 79 AAEEEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKKQRIVNISSVAGL-GGP------- 150 (251)
T ss_pred HHHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhhCeEEEECCchhc-CCC-------
Confidence 4 4699999999974 2233446778899999999999888543321 1289999997643 211
Q ss_pred CCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccc
Q 019795 148 FPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNP 187 (335)
Q Consensus 148 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v 187 (335)
.....|+.||.+.+.+.+.++.+. .++.+..+-|+.+
T Consensus 151 ---~~~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~PG~~ 189 (251)
T COG1028 151 ---PGQAAYAASKAALIGLTKALALELAPRGIRVNAVAPGYI 189 (251)
T ss_pred ---CCcchHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeccC
Confidence 004689999999999998888552 2788999999844
|
|
| >COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.62 E-value=1.7e-14 Score=115.86 Aligned_cols=167 Identities=19% Similarity=0.218 Sum_probs=124.2
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc---
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS--- 79 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~--- 79 (335)
.+.+||||||+.+||..|+++|.+.|..|++.+|+.....+..... +.+....+|+.|.++.+++.+.
T Consensus 4 tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~---------p~~~t~v~Dv~d~~~~~~lvewLkk 74 (245)
T COG3967 4 TGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAEN---------PEIHTEVCDVADRDSRRELVEWLKK 74 (245)
T ss_pred cCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcC---------cchheeeecccchhhHHHHHHHHHh
Confidence 4578999999999999999999999999999999876665554332 6788899999999987776664
Q ss_pred --CCCCEEEEcccccch------hhhhcChHHHHHHhHHHHHHHHHHHHHc----CCCEEEEeccccccCCCCCCCccCC
Q 019795 80 --QKFEAVIHFGALKAV------AESVQHPFRYFDNNLIGTINLYQAMAKY----NCKKLVFSSSATIYGQPEKIPCVED 147 (335)
Q Consensus 80 --~~~d~vi~~a~~~~~------~~~~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~~v~~Ss~~vyg~~~~~~~~e~ 147 (335)
...+++|||||+... ....++.++.+.+|+.++.+|..++..+ ....+|++||.-.+-
T Consensus 75 ~~P~lNvliNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~~a~IInVSSGLafv---------- 144 (245)
T COG3967 75 EYPNLNVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQPEATIINVSSGLAFV---------- 144 (245)
T ss_pred hCCchheeeecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCCCceEEEeccccccC----------
Confidence 268999999997422 2233445677899999999999886543 335799999965441
Q ss_pred CCCCCCChhHHhHHHHHHHHHHHHh---hCCCCeEEEEecccccCC
Q 019795 148 FPYGAMNPYGRTKQWCEEIAFDVQK---ADPEWRIILLRYFNPVGA 190 (335)
Q Consensus 148 ~~~~~~~~Y~~sK~~~E~~~~~~~~---~~~~~~~~~lR~~~v~G~ 190 (335)
|....-.|..+|+....+..++.. .. ++.++=+-|+.|--+
T Consensus 145 -Pm~~~PvYcaTKAaiHsyt~aLR~Qlk~t-~veVIE~~PP~V~t~ 188 (245)
T COG3967 145 -PMASTPVYCATKAAIHSYTLALREQLKDT-SVEVIELAPPLVDTT 188 (245)
T ss_pred -cccccccchhhHHHHHHHHHHHHHHhhhc-ceEEEEecCCceecC
Confidence 333333699999988866554443 33 677777778777553
|
|
| >KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.61 E-value=3e-14 Score=116.30 Aligned_cols=173 Identities=17% Similarity=0.197 Sum_probs=122.5
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhC-CCeEEEE-ecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQG-GFKVVLI-DNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~-g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~ 79 (335)
|..|+++||||+.+||..|+++|++. |.++++. +|++.......+.. . ...+++.+++.|+++.+++.++.++
T Consensus 1 Mspksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a~~~l~~k-~----~~d~rvHii~Ldvt~deS~~~~~~~ 75 (249)
T KOG1611|consen 1 MSPKSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKAATELALK-S----KSDSRVHIIQLDVTCDESIDNFVQE 75 (249)
T ss_pred CCCccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHhhHHHHHh-h----ccCCceEEEEEecccHHHHHHHHHH
Confidence 56788999999999999999999986 6665554 44444432111111 1 1137899999999988877776664
Q ss_pred -------CCCCEEEEcccccch-----hhhhcChHHHHHHhHHHHHHHHHHHH----HcCCC-----------EEEEecc
Q 019795 80 -------QKFEAVIHFGALKAV-----AESVQHPFRYFDNNLIGTINLYQAMA----KYNCK-----------KLVFSSS 132 (335)
Q Consensus 80 -------~~~d~vi~~a~~~~~-----~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~-----------~~v~~Ss 132 (335)
.+.+++|++||+... ..+.+.+...+++|..++..+.+++. +...+ .+|++||
T Consensus 76 V~~iVg~~GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~raaIinisS 155 (249)
T KOG1611|consen 76 VEKIVGSDGLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLSVSRAAIINISS 155 (249)
T ss_pred HHhhcccCCceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCcccccceeEEEeec
Confidence 478999999997432 22344566789999999999988742 22112 5888988
Q ss_pred ccccCCCCCCCccCCCCCCCCChhHHhHHHHHHHHHHHHhhCC--CCeEEEEecccc
Q 019795 133 ATIYGQPEKIPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKADP--EWRIILLRYFNP 187 (335)
Q Consensus 133 ~~vyg~~~~~~~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~--~~~~~~lR~~~v 187 (335)
.+.- .......+...|..||.+...+.+..+-+.. ++-++.+.||+|
T Consensus 156 ~~~s--------~~~~~~~~~~AYrmSKaAlN~f~ksls~dL~~~~ilv~sihPGwV 204 (249)
T KOG1611|consen 156 SAGS--------IGGFRPGGLSAYRMSKAALNMFAKSLSVDLKDDHILVVSIHPGWV 204 (249)
T ss_pred cccc--------cCCCCCcchhhhHhhHHHHHHHHHHhhhhhcCCcEEEEEecCCeE
Confidence 5532 1112445567899999999999998886642 566788889888
|
|
| >KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.61 E-value=1.5e-14 Score=115.04 Aligned_cols=174 Identities=16% Similarity=0.103 Sum_probs=122.9
Q ss_pred CCCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc-
Q 019795 1 MASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS- 79 (335)
Q Consensus 1 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~- 79 (335)
|++.|.++||||+..||+++++.|.+.|++|.+.+++....++....+.. + ..-..+.+|++++.+++..+++
T Consensus 11 r~~sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g---~---~~h~aF~~DVS~a~~v~~~l~e~ 84 (256)
T KOG1200|consen 11 RLMSKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGG---Y---GDHSAFSCDVSKAHDVQNTLEEM 84 (256)
T ss_pred HHhcceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCC---C---CccceeeeccCcHHHHHHHHHHH
Confidence 35678999999999999999999999999999999877655555444422 1 2445688999999988886664
Q ss_pred ----CCCCEEEEcccccc----hhhhhcChHHHHHHhHHHHHHHHHHHHHc----C--CCEEEEecccc-ccCCCCCCCc
Q 019795 80 ----QKFEAVIHFGALKA----VAESVQHPFRYFDNNLIGTINLYQAMAKY----N--CKKLVFSSSAT-IYGQPEKIPC 144 (335)
Q Consensus 80 ----~~~d~vi~~a~~~~----~~~~~~~~~~~~~~nv~~~~~l~~~~~~~----~--~~~~v~~Ss~~-vyg~~~~~~~ 144 (335)
..|++++||||+.. ...+.++|++.+.+|+.|++.+.+++.+. + ..+||++||.- -.|..+..
T Consensus 85 ~k~~g~psvlVncAGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSIVGkiGN~GQt-- 162 (256)
T KOG1200|consen 85 EKSLGTPSVLVNCAGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSIVGKIGNFGQT-- 162 (256)
T ss_pred HHhcCCCcEEEEcCccccccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeehhhhcccccccch--
Confidence 48999999999843 23356788899999999999999986542 2 23899999932 22222110
Q ss_pred cCCCCCCCCChhHHhHHHHHHHHHHHHhhCCCCeEEEEecccccCC
Q 019795 145 VEDFPYGAMNPYGRTKQWCEEIAFDVQKADPEWRIILLRYFNPVGA 190 (335)
Q Consensus 145 ~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~lR~~~v~G~ 190 (335)
++.......-+.+|.++.+..+. ++++..+-|+.|--|
T Consensus 163 --nYAAsK~GvIgftktaArEla~k------nIrvN~VlPGFI~tp 200 (256)
T KOG1200|consen 163 --NYAASKGGVIGFTKTAARELARK------NIRVNVVLPGFIATP 200 (256)
T ss_pred --hhhhhcCceeeeeHHHHHHHhhc------CceEeEeccccccCh
Confidence 00111112345555555555433 899999999887555
|
|
| >KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.61 E-value=7.2e-15 Score=118.51 Aligned_cols=164 Identities=16% Similarity=0.153 Sum_probs=119.7
Q ss_pred CCCeEEEEcC-CChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 3 SEKNILVTGG-AGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 3 ~~~~vlItGa-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
..|+|||||. +|+||.+|++.|.++||.|++..|+.+.-.....+ .++...+.|+++++++.+....
T Consensus 6 ~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~----------~gl~~~kLDV~~~~~V~~v~~evr 75 (289)
T KOG1209|consen 6 QPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQ----------FGLKPYKLDVSKPEEVVTVSGEVR 75 (289)
T ss_pred CCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHh----------hCCeeEEeccCChHHHHHHHHHHh
Confidence 4578999875 68999999999999999999999976654333211 4688999999999988876553
Q ss_pred ----CCCCEEEEccccc----chhhhhcChHHHHHHhHHHHHHHHHHHHHc---CCCEEEEeccccccCCCCCCCccCCC
Q 019795 80 ----QKFEAVIHFGALK----AVAESVQHPFRYFDNNLIGTINLYQAMAKY---NCKKLVFSSSATIYGQPEKIPCVEDF 148 (335)
Q Consensus 80 ----~~~d~vi~~a~~~----~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~~v~~Ss~~vyg~~~~~~~~e~~ 148 (335)
++.|.++|+||.. .........+..+++|+.|..++.++..+. ..+.||+++|..+|-
T Consensus 76 ~~~~Gkld~L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaKGtIVnvgSl~~~v----------- 144 (289)
T KOG1209|consen 76 ANPDGKLDLLYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAKGTIVNVGSLAGVV----------- 144 (289)
T ss_pred hCCCCceEEEEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHccceEEEecceeEEe-----------
Confidence 5789999999973 222234556689999999998888886542 125899999988772
Q ss_pred CCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccc
Q 019795 149 PYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNP 187 (335)
Q Consensus 149 ~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v 187 (335)
|.+-.+.|..||++...+.+.+.-+- .|.+++.+-+|.|
T Consensus 145 pfpf~~iYsAsKAAihay~~tLrlEl~PFgv~Vin~itGGv 185 (289)
T KOG1209|consen 145 PFPFGSIYSASKAAIHAYARTLRLELKPFGVRVINAITGGV 185 (289)
T ss_pred ccchhhhhhHHHHHHHHhhhhcEEeeeccccEEEEecccce
Confidence 33334579999998877776554432 1555555555444
|
|
| >PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=2.6e-14 Score=123.60 Aligned_cols=151 Identities=14% Similarity=0.064 Sum_probs=115.1
Q ss_pred HHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--CCCCEEEEcccccchhhh
Q 019795 20 CALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS--QKFEAVIHFGALKAVAES 97 (335)
Q Consensus 20 l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~--~~~d~vi~~a~~~~~~~~ 97 (335)
+++.|+++|++|++++|+..... ...++.+|++|.+++.++++. .++|+|||+||...
T Consensus 1 ~a~~l~~~G~~Vv~~~r~~~~~~----------------~~~~~~~Dl~~~~~v~~~~~~~~~~iD~li~nAG~~~---- 60 (241)
T PRK12428 1 TARLLRFLGARVIGVDRREPGMT----------------LDGFIQADLGDPASIDAAVAALPGRIDALFNIAGVPG---- 60 (241)
T ss_pred ChHHHHhCCCEEEEEeCCcchhh----------------hhHhhcccCCCHHHHHHHHHHhcCCCeEEEECCCCCC----
Confidence 47889999999999998754321 124578999999999998885 36999999999752
Q ss_pred hcChHHHHHHhHHHHHHHHHHHHHc--CCCEEEEeccccccCCCCCCCccCC----------------CCCCCCChhHHh
Q 019795 98 VQHPFRYFDNNLIGTINLYQAMAKY--NCKKLVFSSSATIYGQPEKIPCVED----------------FPYGAMNPYGRT 159 (335)
Q Consensus 98 ~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~----------------~~~~~~~~Y~~s 159 (335)
...++..+++|+.++..+++.+... ..++||++||...|+.....+..++ .+..+...|+.|
T Consensus 61 ~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~s 140 (241)
T PRK12428 61 TAPVELVARVNFLGLRHLTEALLPRMAPGGAIVNVASLAGAEWPQRLELHKALAATASFDEGAAWLAAHPVALATGYQLS 140 (241)
T ss_pred CCCHHHhhhhchHHHHHHHHHHHHhccCCcEEEEeCcHHhhccccchHHHHhhhccchHHHHHHhhhccCCCcccHHHHH
Confidence 3457789999999999999998754 2369999999888763322111111 234456789999
Q ss_pred HHHHHHHHHHHH-hhC--CCCeEEEEecccccCC
Q 019795 160 KQWCEEIAFDVQ-KAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 160 K~~~E~~~~~~~-~~~--~~~~~~~lR~~~v~G~ 190 (335)
|...+.+++.++ .+. .++++.+++|+.+.++
T Consensus 141 K~a~~~~~~~la~~e~~~~girvn~v~PG~v~T~ 174 (241)
T PRK12428 141 KEALILWTMRQAQPWFGARGIRVNCVAPGPVFTP 174 (241)
T ss_pred HHHHHHHHHHHHHHhhhccCeEEEEeecCCccCc
Confidence 999999998887 443 2799999999998776
|
|
| >KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only] | Back alignment and domain information |
|---|
Probab=99.56 E-value=1.9e-13 Score=117.46 Aligned_cols=165 Identities=18% Similarity=0.172 Sum_probs=127.2
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc---
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS--- 79 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~--- 79 (335)
..|.|+|||.-.+.|..|+++|.++|+.|.+-+..++..+....... +++...+..|++++++++++.+.
T Consensus 28 ~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~-------s~rl~t~~LDVT~~esi~~a~~~V~~ 100 (322)
T KOG1610|consen 28 SDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETK-------SPRLRTLQLDVTKPESVKEAAQWVKK 100 (322)
T ss_pred CCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhc-------CCcceeEeeccCCHHHHHHHHHHHHH
Confidence 45789999999999999999999999999998865544433333221 27889999999999998887663
Q ss_pred ----CCCCEEEEcccccc-----hhhhhcChHHHHHHhHHHHHHHHHHHHHc---CCCEEEEeccccccCCCCCCCccCC
Q 019795 80 ----QKFEAVIHFGALKA-----VAESVQHPFRYFDNNLIGTINLYQAMAKY---NCKKLVFSSSATIYGQPEKIPCVED 147 (335)
Q Consensus 80 ----~~~d~vi~~a~~~~-----~~~~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~~v~~Ss~~vyg~~~~~~~~e~ 147 (335)
.+.-.||||||+.. ...+.++....+++|+.|+..+.+++... .-+|+|++||..- .
T Consensus 101 ~l~~~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~arGRvVnvsS~~G--R--------- 169 (322)
T KOG1610|consen 101 HLGEDGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRARGRVVNVSSVLG--R--------- 169 (322)
T ss_pred hcccccceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhccCeEEEeccccc--C---------
Confidence 35779999999532 23356778889999999999999986532 2269999999552 1
Q ss_pred CCCCCCChhHHhHHHHHHHHHHHHhh--CCCCeEEEEecc
Q 019795 148 FPYGAMNPYGRTKQWCEEIAFDVQKA--DPEWRIILLRYF 185 (335)
Q Consensus 148 ~~~~~~~~Y~~sK~~~E~~~~~~~~~--~~~~~~~~lR~~ 185 (335)
-+.+...+|+.||.+.|.+......| ..|..+.++=||
T Consensus 170 ~~~p~~g~Y~~SK~aVeaf~D~lR~EL~~fGV~VsiiePG 209 (322)
T KOG1610|consen 170 VALPALGPYCVSKFAVEAFSDSLRRELRPFGVKVSIIEPG 209 (322)
T ss_pred ccCcccccchhhHHHHHHHHHHHHHHHHhcCcEEEEeccC
Confidence 13334568999999999988877766 128999999987
|
|
| >KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.56 E-value=1.1e-14 Score=113.69 Aligned_cols=170 Identities=19% Similarity=0.135 Sum_probs=132.2
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc-C
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-Q 80 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-~ 80 (335)
+.++.|++||+.-+||+.+++.|++.|..|+++.|.+.......+. .+..++.+.+|+.+.+.+.+++.. .
T Consensus 5 laG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~e--------~p~~I~Pi~~Dls~wea~~~~l~~v~ 76 (245)
T KOG1207|consen 5 LAGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLVKE--------TPSLIIPIVGDLSAWEALFKLLVPVF 76 (245)
T ss_pred ccceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHHhh--------CCcceeeeEecccHHHHHHHhhcccC
Confidence 4678999999999999999999999999999999976654444332 225689999999998888877764 4
Q ss_pred CCCEEEEccccc----chhhhhcChHHHHHHhHHHHHHHHHHHHH----cCC-CEEEEeccccccCCCCCCCccCCCCCC
Q 019795 81 KFEAVIHFGALK----AVAESVQHPFRYFDNNLIGTINLYQAMAK----YNC-KKLVFSSSATIYGQPEKIPCVEDFPYG 151 (335)
Q Consensus 81 ~~d~vi~~a~~~----~~~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~-~~~v~~Ss~~vyg~~~~~~~~e~~~~~ 151 (335)
.+|.++|+||+. +.....+..+..|.+|+.++.++.+...+ .++ +.||++||.+.. -+..
T Consensus 77 pidgLVNNAgvA~~~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~~~GaIVNvSSqas~-----------R~~~ 145 (245)
T KOG1207|consen 77 PIDGLVNNAGVATNHPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQIKGAIVNVSSQASI-----------RPLD 145 (245)
T ss_pred chhhhhccchhhhcchHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhccCCceEEEecchhcc-----------cccC
Confidence 679999999973 33445678889999999999999887433 232 469999996532 2455
Q ss_pred CCChhHHhHHHHHHHHHHHHhhCC--CCeEEEEecccccCC
Q 019795 152 AMNPYGRTKQWCEEIAFDVQKADP--EWRIILLRYFNPVGA 190 (335)
Q Consensus 152 ~~~~Y~~sK~~~E~~~~~~~~~~~--~~~~~~lR~~~v~G~ 190 (335)
.++.|..+|.+.+.+.+..+-+.. .+++..+.|..|+-.
T Consensus 146 nHtvYcatKaALDmlTk~lAlELGp~kIRVNsVNPTVVmT~ 186 (245)
T KOG1207|consen 146 NHTVYCATKAALDMLTKCLALELGPQKIRVNSVNPTVVMTD 186 (245)
T ss_pred CceEEeecHHHHHHHHHHHHHhhCcceeEeeccCCeEEEec
Confidence 667899999999999988887741 567888888887654
|
|
| >PRK06300 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=1.4e-13 Score=122.09 Aligned_cols=177 Identities=10% Similarity=-0.008 Sum_probs=111.9
Q ss_pred CCCeEEEEcCC--ChhhHHHHHHHHhCCCeEEEEecCC------CC--chhhHHhhhhhcCC----------c-ccccee
Q 019795 3 SEKNILVTGGA--GFIGTHCALQLLQGGFKVVLIDNLH------NS--VPEAVDRVKDLAGP----------E-LAKKLE 61 (335)
Q Consensus 3 ~~~~vlItGat--G~iG~~l~~~L~~~g~~V~~~~r~~------~~--~~~~~~~~~~~~~~----------~-~~~~i~ 61 (335)
++|+++|||++ ..||+++++.|+++|++|++.++.+ .. ............+. . .-...+
T Consensus 7 ~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~~~~~ 86 (299)
T PRK06300 7 TGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWVPIYKIFSQSLELGKFDASRKLSNGSLLTFAKIYPMDASFDTPE 86 (299)
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEeccchhhhhhhhcccccccccccccccchhhhhhHHHhhhhcCCCE
Confidence 46899999995 8999999999999999999876531 00 00000000000000 0 000111
Q ss_pred EEEccCCC--------HHHHHHHHhc-----CCCCEEEEcccccc------hhhhhcChHHHHHHhHHHHHHHHHHHHHc
Q 019795 62 FHVGDLRN--------KDDLDKLFSS-----QKFEAVIHFGALKA------VAESVQHPFRYFDNNLIGTINLYQAMAKY 122 (335)
Q Consensus 62 ~~~~Dl~d--------~~~~~~~~~~-----~~~d~vi~~a~~~~------~~~~~~~~~~~~~~nv~~~~~l~~~~~~~ 122 (335)
-+..|+++ ..+++++++. .++|++|||||... ...+.++++..+++|+.++.++++++...
T Consensus 87 ~v~~~i~~~~~~~~~~~~si~~~~~~v~~~~G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~~a~~p~ 166 (299)
T PRK06300 87 DVPEEIRENKRYKDLSGYTISEVAEQVKKDFGHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLLSHFGPI 166 (299)
T ss_pred EeecccCccccccCCCHHHHHHHHHHHHHHcCCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 22222222 1234554443 47999999997521 22345677889999999999999987653
Q ss_pred --CCCEEEEeccccccCCCCCCCccCCCCCCCC-ChhHHhHHHHHHHHHHHHhhC-C--CCeEEEEecccccCC
Q 019795 123 --NCKKLVFSSSATIYGQPEKIPCVEDFPYGAM-NPYGRTKQWCEEIAFDVQKAD-P--EWRIILLRYFNPVGA 190 (335)
Q Consensus 123 --~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~-~~Y~~sK~~~E~~~~~~~~~~-~--~~~~~~lR~~~v~G~ 190 (335)
.-+++|++||....- +.... ..|+.+|...+.+++.++.+. + ++++.++.|+.+--+
T Consensus 167 m~~~G~ii~iss~~~~~-----------~~p~~~~~Y~asKaAl~~lt~~la~el~~~~gIrVn~V~PG~v~T~ 229 (299)
T PRK06300 167 MNPGGSTISLTYLASMR-----------AVPGYGGGMSSAKAALESDTKVLAWEAGRRWGIRVNTISAGPLASR 229 (299)
T ss_pred hhcCCeEEEEeehhhcC-----------cCCCccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEEeCCccCh
Confidence 225789888754321 11112 269999999999999988874 2 789999999876443
|
|
| >PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain | Back alignment and domain information |
|---|
Probab=99.54 E-value=4.2e-13 Score=110.73 Aligned_cols=161 Identities=17% Similarity=0.279 Sum_probs=114.6
Q ss_pred eEEEEcCCChhhHHHHHHHHhCC-CeEEEEecCCC---CchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 6 NILVTGGAGFIGTHCALQLLQGG-FKVVLIDNLHN---SVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 6 ~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~---~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
++|||||+|.||..+++.|+++| .++++++|+.. ......+++... ...+.++.+|++|++++.++++.
T Consensus 2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~-----g~~v~~~~~Dv~d~~~v~~~~~~~~ 76 (181)
T PF08659_consen 2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESA-----GARVEYVQCDVTDPEAVAAALAQLR 76 (181)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHT-----T-EEEEEE--TTSHHHHHHHHHTSH
T ss_pred EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhC-----CCceeeeccCccCHHHHHHHHHHHH
Confidence 68999999999999999999997 57999999832 222334444432 26899999999999999999886
Q ss_pred ---CCCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEecccc-ccCCCCCCCccCCCCCC
Q 019795 80 ---QKFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSAT-IYGQPEKIPCVEDFPYG 151 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~-vyg~~~~~~~~e~~~~~ 151 (335)
..++.|||+|+.... ..+.+.....+..-+.++.+|.+++....++.+|.+||.. ++|..
T Consensus 77 ~~~~~i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~~~l~~~i~~SSis~~~G~~------------ 144 (181)
T PF08659_consen 77 QRFGPIDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALENRPLDFFILFSSISSLLGGP------------ 144 (181)
T ss_dssp TTSS-EEEEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTTTTTSEEEEEEEHHHHTT-T------------
T ss_pred hccCCcceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhcCCCCeEEEECChhHhccCc------------
Confidence 267899999997432 2234455677888899999999999888888999999955 45432
Q ss_pred CCChhHHhHHHHHHHHHHHHhhCCCCeEEEEecc
Q 019795 152 AMNPYGRTKQWCEEIAFDVQKADPEWRIILLRYF 185 (335)
Q Consensus 152 ~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~lR~~ 185 (335)
....|+......+.+++.... . +.++.++..+
T Consensus 145 gq~~YaaAN~~lda~a~~~~~-~-g~~~~sI~wg 176 (181)
T PF08659_consen 145 GQSAYAAANAFLDALARQRRS-R-GLPAVSINWG 176 (181)
T ss_dssp TBHHHHHHHHHHHHHHHHHHH-T-TSEEEEEEE-
T ss_pred chHhHHHHHHHHHHHHHHHHh-C-CCCEEEEEcc
Confidence 336799999999988876544 3 8888887654
|
It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B .... |
| >PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B | Back alignment and domain information |
|---|
Probab=99.54 E-value=6.4e-14 Score=121.20 Aligned_cols=163 Identities=19% Similarity=0.211 Sum_probs=125.4
Q ss_pred cCC--ChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc------CCC
Q 019795 11 GGA--GFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS------QKF 82 (335)
Q Consensus 11 Gat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~------~~~ 82 (335)
|++ +.||+++++.|+++|++|++++|+..+.....+++.+..+ ..++.+|+++++++.++++. .++
T Consensus 1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~------~~~~~~D~~~~~~v~~~~~~~~~~~~g~i 74 (241)
T PF13561_consen 1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEYG------AEVIQCDLSDEESVEALFDEAVERFGGRI 74 (241)
T ss_dssp STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHTT------SEEEESCTTSHHHHHHHHHHHHHHHCSSE
T ss_pred CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHcC------CceEeecCcchHHHHHHHHHHHhhcCCCe
Confidence 666 9999999999999999999999987655445555554332 33699999999999888765 589
Q ss_pred CEEEEcccccch--------hhhhcChHHHHHHhHHHHHHHHHHHHHc--CCCEEEEeccccccCCCCCCCccCCCCCCC
Q 019795 83 EAVIHFGALKAV--------AESVQHPFRYFDNNLIGTINLYQAMAKY--NCKKLVFSSSATIYGQPEKIPCVEDFPYGA 152 (335)
Q Consensus 83 d~vi~~a~~~~~--------~~~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~ 152 (335)
|++||+++.... ..+.+.++..+++|+.++..+++++.+. .-.++|++||..... +...
T Consensus 75 D~lV~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsii~iss~~~~~-----------~~~~ 143 (241)
T PF13561_consen 75 DILVNNAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKGGSIINISSIAAQR-----------PMPG 143 (241)
T ss_dssp SEEEEEEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHEEEEEEEEEGGGTS-----------BSTT
T ss_pred EEEEecccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccccchhhcc-----------cCcc
Confidence 999999987543 1234567789999999999999987543 125899999865431 2334
Q ss_pred CChhHHhHHHHHHHHHHHHhhCC---CCeEEEEecccccCC
Q 019795 153 MNPYGRTKQWCEEIAFDVQKADP---EWRIILLRYFNPVGA 190 (335)
Q Consensus 153 ~~~Y~~sK~~~E~~~~~~~~~~~---~~~~~~lR~~~v~G~ 190 (335)
...|+.+|...+.+++.++.++. ++++.++.|+.+..+
T Consensus 144 ~~~y~~sKaal~~l~r~lA~el~~~~gIrVN~V~pG~i~t~ 184 (241)
T PF13561_consen 144 YSAYSASKAALEGLTRSLAKELAPKKGIRVNAVSPGPIETP 184 (241)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHGGHGTEEEEEEEESSBSSH
T ss_pred chhhHHHHHHHHHHHHHHHHHhccccCeeeeeecccceecc
Confidence 45899999999999998887642 689999999877543
|
... |
| >TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA | Back alignment and domain information |
|---|
Probab=99.53 E-value=2e-13 Score=147.94 Aligned_cols=173 Identities=20% Similarity=0.264 Sum_probs=131.1
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhC-CCeEEEEecCCCCc----------------------------------------
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQG-GFKVVLIDNLHNSV---------------------------------------- 41 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~---------------------------------------- 41 (335)
+++++|||||+++||..+++.|+++ |++|++++|+....
T Consensus 1996 ~g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~~ 2075 (2582)
T TIGR02813 1996 SDDVFLVTGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVRP 2075 (2582)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhcccc
Confidence 5689999999999999999999998 69999999973100
Q ss_pred ----hhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc----CCCCEEEEcccccch----hhhhcChHHHHHHhH
Q 019795 42 ----PEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS----QKFEAVIHFGALKAV----AESVQHPFRYFDNNL 109 (335)
Q Consensus 42 ----~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~----~~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv 109 (335)
.+....+..+. ..+..+.++.+|++|.+++.++++. .++|.|||+||.... ..+.++++.++++|+
T Consensus 2076 ~~~~~ei~~~la~l~--~~G~~v~y~~~DVtD~~av~~av~~v~~~g~IDgVVhnAGv~~~~~i~~~t~e~f~~v~~~nv 2153 (2582)
T TIGR02813 2076 VLSSLEIAQALAAFK--AAGASAEYASADVTNSVSVAATVQPLNKTLQITGIIHGAGVLADKHIQDKTLEEFNAVYGTKV 2153 (2582)
T ss_pred cchhHHHHHHHHHHH--hcCCcEEEEEccCCCHHHHHHHHHHHHHhCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHH
Confidence 00000011110 1125688999999999988887774 369999999997422 234567788999999
Q ss_pred HHHHHHHHHHHHcCCCEEEEeccccc-cCCCCCCCccCCCCCCCCChhHHhHHHHHHHHHHHHhhCCCCeEEEEeccccc
Q 019795 110 IGTINLYQAMAKYNCKKLVFSSSATI-YGQPEKIPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKADPEWRIILLRYFNPV 188 (335)
Q Consensus 110 ~~~~~l~~~~~~~~~~~~v~~Ss~~v-yg~~~~~~~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~lR~~~v~ 188 (335)
.|+.++++++.....++||++||... +|. .....|+.+|...+.+.+.+..++++.++.++.++.+-
T Consensus 2154 ~G~~~Ll~al~~~~~~~IV~~SSvag~~G~------------~gqs~YaaAkaaL~~la~~la~~~~~irV~sI~wG~wd 2221 (2582)
T TIGR02813 2154 DGLLSLLAALNAENIKLLALFSSAAGFYGN------------TGQSDYAMSNDILNKAALQLKALNPSAKVMSFNWGPWD 2221 (2582)
T ss_pred HHHHHHHHHHHHhCCCeEEEEechhhcCCC------------CCcHHHHHHHHHHHHHHHHHHHHcCCcEEEEEECCeec
Confidence 99999999998776678999999654 332 23457999999999999988888777888999887654
Q ss_pred C
Q 019795 189 G 189 (335)
Q Consensus 189 G 189 (335)
+
T Consensus 2222 t 2222 (2582)
T TIGR02813 2222 G 2222 (2582)
T ss_pred C
Confidence 4
|
Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD. |
| >KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only] | Back alignment and domain information |
|---|
Probab=99.53 E-value=8.5e-14 Score=113.72 Aligned_cols=166 Identities=27% Similarity=0.305 Sum_probs=121.8
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
..+|++++||+.|+||+.++++|+++|..+.++.-+.+. .+...+|..+.+ +..+.++++|+++..++++++++
T Consensus 3 ~tGKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En-~~a~akL~ai~p---~~~v~F~~~DVt~~~~~~~~f~ki~ 78 (261)
T KOG4169|consen 3 LTGKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEEN-PEAIAKLQAINP---SVSVIFIKCDVTNRGDLEAAFDKIL 78 (261)
T ss_pred ccCceEEEecCCchhhHHHHHHHHHcCchheeehhhhhC-HHHHHHHhccCC---CceEEEEEeccccHHHHHHHHHHHH
Confidence 358999999999999999999999999888887665443 445555655443 37899999999999999988886
Q ss_pred ---CCCCEEEEcccccchhhhhcChHHHHHHhHHHHHHH----HHHHHHc--C-CCEEEEeccccccCCCCCCCccCCCC
Q 019795 80 ---QKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINL----YQAMAKY--N-CKKLVFSSSATIYGQPEKIPCVEDFP 149 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l----~~~~~~~--~-~~~~v~~Ss~~vyg~~~~~~~~e~~~ 149 (335)
..+|++||.||+. .+.+++.++.+|+.|..+- +.++.+. | -+-+|++||+. |- .|
T Consensus 79 ~~fg~iDIlINgAGi~----~dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~--GL---------~P 143 (261)
T KOG4169|consen 79 ATFGTIDILINGAGIL----DDKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVA--GL---------DP 143 (261)
T ss_pred HHhCceEEEEcccccc----cchhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEecccc--cc---------Cc
Confidence 4899999999995 3667889999999876554 4444433 2 24688999944 32 12
Q ss_pred CCCCChhHHhHHHHHHHHHHHH-----hhCCCCeEEEEecccc
Q 019795 150 YGAMNPYGRTKQWCEEIAFDVQ-----KADPEWRIILLRYFNP 187 (335)
Q Consensus 150 ~~~~~~Y~~sK~~~E~~~~~~~-----~~~~~~~~~~lR~~~v 187 (335)
.+-...|+.||+..--+.|..+ .+. |..+..+.|+.+
T Consensus 144 ~p~~pVY~AsKaGVvgFTRSla~~ayy~~s-GV~~~avCPG~t 185 (261)
T KOG4169|consen 144 MPVFPVYAASKAGVVGFTRSLADLAYYQRS-GVRFNAVCPGFT 185 (261)
T ss_pred cccchhhhhcccceeeeehhhhhhhhHhhc-CEEEEEECCCcc
Confidence 2333468888877666666533 223 788888877643
|
|
| >COG2910 Putative NADH-flavin reductase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.50 E-value=2.6e-12 Score=101.62 Aligned_cols=160 Identities=13% Similarity=0.049 Sum_probs=117.1
Q ss_pred CeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCCCE
Q 019795 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKFEA 84 (335)
Q Consensus 5 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~d~ 84 (335)
|+|.|+||||-+|+.+++...++||+|+++.|++.+.... +.+.+++.|+.|.+++.+.+. +.|+
T Consensus 1 mKIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~-------------~~~~i~q~Difd~~~~a~~l~--g~Da 65 (211)
T COG2910 1 MKIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAAR-------------QGVTILQKDIFDLTSLASDLA--GHDA 65 (211)
T ss_pred CeEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhcccc-------------ccceeecccccChhhhHhhhc--CCce
Confidence 6899999999999999999999999999999987765321 467789999999999999888 8999
Q ss_pred EEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccc-cCCCCCCCccCCCCCCCCChhHHhHHHH
Q 019795 85 VIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATI-YGQPEKIPCVEDFPYGAMNPYGRTKQWC 163 (335)
Q Consensus 85 vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~v-yg~~~~~~~~e~~~~~~~~~Y~~sK~~~ 163 (335)
||..-+.....+ +.. .+.....+++.++..++.|++.++.++. |-.+. ..-.|.|..|...|...+..+
T Consensus 66 VIsA~~~~~~~~-----~~~---~~k~~~~li~~l~~agv~RllVVGGAGSL~id~g--~rLvD~p~fP~ey~~~A~~~a 135 (211)
T COG2910 66 VISAFGAGASDN-----DEL---HSKSIEALIEALKGAGVPRLLVVGGAGSLEIDEG--TRLVDTPDFPAEYKPEALAQA 135 (211)
T ss_pred EEEeccCCCCCh-----hHH---HHHHHHHHHHHHhhcCCeeEEEEcCccceEEcCC--ceeecCCCCchhHHHHHHHHH
Confidence 998655432111 111 2233556788888889899998887554 32222 233455666766677777777
Q ss_pred HHHHHHHHhhCCCCeEEEEecccccCCC
Q 019795 164 EEIAFDVQKADPEWRIILLRYFNPVGAH 191 (335)
Q Consensus 164 E~~~~~~~~~~~~~~~~~lR~~~v~G~~ 191 (335)
|.+ ..+..+. .++|+-+-|+..+-|.
T Consensus 136 e~L-~~Lr~~~-~l~WTfvSPaa~f~PG 161 (211)
T COG2910 136 EFL-DSLRAEK-SLDWTFVSPAAFFEPG 161 (211)
T ss_pred HHH-HHHhhcc-CcceEEeCcHHhcCCc
Confidence 633 3354555 7999999998877773
|
|
| >KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.49 E-value=1.1e-12 Score=112.49 Aligned_cols=172 Identities=17% Similarity=0.212 Sum_probs=130.8
Q ss_pred CeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcC----
Q 019795 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQ---- 80 (335)
Q Consensus 5 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~---- 80 (335)
.+|+|||++..+|..++..+..+|++|+++.|+..+..++...+.-.... ..+.+..+|+.|.+++...++..
T Consensus 34 ~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~---~~v~~~S~d~~~Y~~v~~~~~~l~~~~ 110 (331)
T KOG1210|consen 34 RHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQV---EDVSYKSVDVIDYDSVSKVIEELRDLE 110 (331)
T ss_pred ceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhcc---ceeeEeccccccHHHHHHHHhhhhhcc
Confidence 47999999999999999999999999999999988888887776544331 23779999999999999888864
Q ss_pred -CCCEEEEccccc----chhhhhcChHHHHHHhHHHHHHHHHHHHHc-----CCCEEEEeccccccCCCCCCCccCCCCC
Q 019795 81 -KFEAVIHFGALK----AVAESVQHPFRYFDNNLIGTINLYQAMAKY-----NCKKLVFSSSATIYGQPEKIPCVEDFPY 150 (335)
Q Consensus 81 -~~d~vi~~a~~~----~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~-----~~~~~v~~Ss~~vyg~~~~~~~~e~~~~ 150 (335)
-+|.+|+|||.. ....+.+..+.++++|..|+.++++++... ...+|+.+||.... .+.
T Consensus 111 ~~~d~l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~~a~-----------~~i 179 (331)
T KOG1210|consen 111 GPIDNLFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQLAM-----------LGI 179 (331)
T ss_pred CCcceEEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehhhhhh-----------cCc
Confidence 789999999973 234456677789999999999999986432 13489998885532 144
Q ss_pred CCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 151 GAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 151 ~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
...+.|..+|.+.--++....+|- .++.++..-|+.+-.|
T Consensus 180 ~GysaYs~sK~alrgLa~~l~qE~i~~~v~Vt~~~P~~~~tp 221 (331)
T KOG1210|consen 180 YGYSAYSPSKFALRGLAEALRQELIKYGVHVTLYYPPDTLTP 221 (331)
T ss_pred ccccccccHHHHHHHHHHHHHHHHhhcceEEEEEcCCCCCCC
Confidence 555678888877666665555442 1777887777776555
|
|
| >KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.48 E-value=5.7e-13 Score=104.45 Aligned_cols=166 Identities=18% Similarity=0.114 Sum_probs=124.2
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCC--CeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGG--FKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~ 79 (335)
|.||+++|.||||-.|+.|.+.+++.+ .+|+++.|++...++.. +.+.....|...-+++...+.
T Consensus 16 mq~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~d~at~------------k~v~q~~vDf~Kl~~~a~~~q- 82 (238)
T KOG4039|consen 16 MQNMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRRELPDPATD------------KVVAQVEVDFSKLSQLATNEQ- 82 (238)
T ss_pred hhccceEEEeccccccHHHHHHHHhcccceeEEEEEeccCCCcccc------------ceeeeEEechHHHHHHHhhhc-
Confidence 568899999999999999999999987 67999998764433322 567777788877777777777
Q ss_pred CCCCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccCCCCCCCccCCCCCCCCChhHHh
Q 019795 80 QKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRT 159 (335)
Q Consensus 80 ~~~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~Y~~s 159 (335)
++|+.+.+-|-..... ..+..+++.-+-.+.+++++++.|+++|+.+||.+. .....-.|-..
T Consensus 83 -g~dV~FcaLgTTRgka---GadgfykvDhDyvl~~A~~AKe~Gck~fvLvSS~GA-------------d~sSrFlY~k~ 145 (238)
T KOG4039|consen 83 -GPDVLFCALGTTRGKA---GADGFYKVDHDYVLQLAQAAKEKGCKTFVLVSSAGA-------------DPSSRFLYMKM 145 (238)
T ss_pred -CCceEEEeeccccccc---ccCceEeechHHHHHHHHHHHhCCCeEEEEEeccCC-------------Ccccceeeeec
Confidence 8999998765432211 123455556666777899999999999999999764 22233468899
Q ss_pred HHHHHHHHHHHHhhCCCC-eEEEEecccccCCCCCCCCCCCCCC
Q 019795 160 KQWCEEIAFDVQKADPEW-RIILLRYFNPVGAHESGKLGEDPKG 202 (335)
Q Consensus 160 K~~~E~~~~~~~~~~~~~-~~~~lR~~~v~G~~~~~~~g~~~~~ 202 (335)
|-..|.-+.++ ++ .++++||+.+.|.++....|+-...
T Consensus 146 KGEvE~~v~eL-----~F~~~~i~RPG~ll~~R~esr~geflg~ 184 (238)
T KOG4039|consen 146 KGEVERDVIEL-----DFKHIIILRPGPLLGERTESRQGEFLGN 184 (238)
T ss_pred cchhhhhhhhc-----cccEEEEecCcceecccccccccchhhh
Confidence 99999888765 44 4899999999999877666654443
|
|
| >KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.48 E-value=4.6e-13 Score=114.98 Aligned_cols=171 Identities=15% Similarity=0.141 Sum_probs=129.6
Q ss_pred CeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHH----HHHHHhcC
Q 019795 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDD----LDKLFSSQ 80 (335)
Q Consensus 5 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~----~~~~~~~~ 80 (335)
+=++|||||.+||++.+++|+++|.+|++++|+..+++...+++.+..+ .++.++.+|.++.+. +.+.+...
T Consensus 50 ~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~----vev~~i~~Dft~~~~~ye~i~~~l~~~ 125 (312)
T KOG1014|consen 50 SWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYK----VEVRIIAIDFTKGDEVYEKLLEKLAGL 125 (312)
T ss_pred CEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhC----cEEEEEEEecCCCchhHHHHHHHhcCC
Confidence 3489999999999999999999999999999999998888887776543 678999999987654 66666656
Q ss_pred CCCEEEEcccccc--hhh----hhcChHHHHHHhHHHHHHHHHHH----HHcCCCEEEEeccccccCCCCCCCccCCCCC
Q 019795 81 KFEAVIHFGALKA--VAE----SVQHPFRYFDNNLIGTINLYQAM----AKYNCKKLVFSSSATIYGQPEKIPCVEDFPY 150 (335)
Q Consensus 81 ~~d~vi~~a~~~~--~~~----~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~ 150 (335)
.+.++|||+|... +.. +.......+.+|+.++..+.+.. .+.+-+.||++||.+-- .|.
T Consensus 126 ~VgILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~~G~IvnigS~ag~-----------~p~ 194 (312)
T KOG1014|consen 126 DVGILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERKKGIIVNIGSFAGL-----------IPT 194 (312)
T ss_pred ceEEEEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCCCceEEEecccccc-----------ccC
Confidence 7789999999754 222 12233467788999987777764 34444679999996532 244
Q ss_pred CCCChhHHhHHHHHHHHHHHHhhCC--CCeEEEEecccccCC
Q 019795 151 GAMNPYGRTKQWCEEIAFDVQKADP--EWRIILLRYFNPVGA 190 (335)
Q Consensus 151 ~~~~~Y~~sK~~~E~~~~~~~~~~~--~~~~~~lR~~~v~G~ 190 (335)
+-.+.|+.||...+.+-....+|+. ++.+-++-|..|-.+
T Consensus 195 p~~s~ysasK~~v~~~S~~L~~Ey~~~gI~Vq~v~p~~VaTk 236 (312)
T KOG1014|consen 195 PLLSVYSASKAFVDFFSRCLQKEYESKGIFVQSVIPYLVATK 236 (312)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhcCeEEEEeehhheecc
Confidence 4456799999999888888777754 777777777776554
|
|
| >KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.38 E-value=2.1e-12 Score=105.61 Aligned_cols=168 Identities=19% Similarity=0.165 Sum_probs=116.6
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc---
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS--- 79 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~--- 79 (335)
+.|.+|+||++.+||..++..+...+-++....+.+...+ .+.+.-.. ........+|++....+.++++.
T Consensus 5 ~r~villTGaSrgiG~~~v~~i~aed~e~~r~g~~r~~a~--~~~L~v~~----gd~~v~~~g~~~e~~~l~al~e~~r~ 78 (253)
T KOG1204|consen 5 MRKVILLTGASRGIGTGSVATILAEDDEALRYGVARLLAE--LEGLKVAY----GDDFVHVVGDITEEQLLGALREAPRK 78 (253)
T ss_pred cceEEEEecCCCCccHHHHHHHHhcchHHHHHhhhccccc--ccceEEEe----cCCcceechHHHHHHHHHHHHhhhhh
Confidence 4578999999999999999999988766555444333322 11111100 12333455666666545544442
Q ss_pred --CCCCEEEEcccccch-------hhhhcChHHHHHHhHHHHHHHHHHHHHc---C--CCEEEEeccccccCCCCCCCcc
Q 019795 80 --QKFEAVIHFGALKAV-------AESVQHPFRYFDNNLIGTINLYQAMAKY---N--CKKLVFSSSATIYGQPEKIPCV 145 (335)
Q Consensus 80 --~~~d~vi~~a~~~~~-------~~~~~~~~~~~~~nv~~~~~l~~~~~~~---~--~~~~v~~Ss~~vyg~~~~~~~~ 145 (335)
...|.||||||.... ..+...+..++++|+.++.-+.+.+... . .+-+|++||.+.-
T Consensus 79 k~gkr~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~~~~vVnvSS~aav--------- 149 (253)
T KOG1204|consen 79 KGGKRDIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPVNGNVVNVSSLAAV--------- 149 (253)
T ss_pred cCCceeEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCccCeEEEecchhhh---------
Confidence 478999999997432 2234567789999999998888876543 2 2578999996532
Q ss_pred CCCCCCCCChhHHhHHHHHHHHHHHHhhCC-CCeEEEEecccc
Q 019795 146 EDFPYGAMNPYGRTKQWCEEIAFDVQKADP-EWRIILLRYFNP 187 (335)
Q Consensus 146 e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~-~~~~~~lR~~~v 187 (335)
-|......|+.+|++.+++++..+.+.| +..+..++||.+
T Consensus 150 --~p~~~wa~yc~~KaAr~m~f~~lA~EEp~~v~vl~~aPGvv 190 (253)
T KOG1204|consen 150 --RPFSSWAAYCSSKAARNMYFMVLASEEPFDVRVLNYAPGVV 190 (253)
T ss_pred --ccccHHHHhhhhHHHHHHHHHHHhhcCccceeEEEccCCcc
Confidence 2556667899999999999999999887 778888888765
|
|
| >PRK06720 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.33 E-value=2.1e-11 Score=99.03 Aligned_cols=129 Identities=18% Similarity=0.176 Sum_probs=87.1
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
+++|+++||||+++||+++++.|.+.|++|++++|+..........+.+. +....++.+|+++.+++.+++++
T Consensus 14 l~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~-----~~~~~~~~~Dl~~~~~v~~~v~~~~ 88 (169)
T PRK06720 14 LAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNL-----GGEALFVSYDMEKQGDWQRVISITL 88 (169)
T ss_pred cCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc-----CCcEEEEEccCCCHHHHHHHHHHHH
Confidence 35689999999999999999999999999999998765443333333321 14567889999999988886643
Q ss_pred ---CCCCEEEEcccccchhhhhc--ChHHHHHHhHHHHHHHHHHHH----Hc-------CCCEEEEeccccc
Q 019795 80 ---QKFEAVIHFGALKAVAESVQ--HPFRYFDNNLIGTINLYQAMA----KY-------NCKKLVFSSSATI 135 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~~~~~~~--~~~~~~~~nv~~~~~l~~~~~----~~-------~~~~~v~~Ss~~v 135 (335)
.++|++||+||......... ..+.....|+.++....+++. +. ...||..+||.+.
T Consensus 89 ~~~G~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (169)
T PRK06720 89 NAFSRIDMLFQNAGLYKIDSIFSRQQENDSNVLCINDVWIEIKQLTSSFMKQQEEVVLSDLPIFGIIGTKGQ 160 (169)
T ss_pred HHcCCCCEEEECCCcCCCCCcccccchhHhhceeccHHHHHHHHHHHHHHhcCCEEEeecCceeeEeccccc
Confidence 47999999999743222111 112233556666555555432 22 2347777777553
|
|
| >KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.30 E-value=2.6e-11 Score=109.38 Aligned_cols=165 Identities=20% Similarity=0.121 Sum_probs=108.4
Q ss_pred CCCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCH-HHHHHHHhc
Q 019795 1 MASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNK-DDLDKLFSS 79 (335)
Q Consensus 1 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~-~~~~~~~~~ 79 (335)
|+++++|+|+||||.+|+-+++.|+++|+.|+++.|+.+....... + . ........+..|...+ +....+...
T Consensus 76 ~~~~~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~-~-~----~~d~~~~~v~~~~~~~~d~~~~~~~~ 149 (411)
T KOG1203|consen 76 SKKPTTVLVVGATGKVGRRIVKILLKRGFSVRALVRDEQKAEDLLG-V-F----FVDLGLQNVEADVVTAIDILKKLVEA 149 (411)
T ss_pred CCCCCeEEEecCCCchhHHHHHHHHHCCCeeeeeccChhhhhhhhc-c-c----ccccccceeeeccccccchhhhhhhh
Confidence 5678899999999999999999999999999999997765544332 0 0 0013455566655443 333444432
Q ss_pred C--CCCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccCCCCCCCccCCCCCCC---CC
Q 019795 80 Q--KFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQPEKIPCVEDFPYGA---MN 154 (335)
Q Consensus 80 ~--~~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~---~~ 154 (335)
. ...+++-+++-... .++...-.++...|+.+++++|+..|++++|++|+.+.--.. .++.. ..
T Consensus 150 ~~~~~~~v~~~~ggrp~---~ed~~~p~~VD~~g~knlvdA~~~aGvk~~vlv~si~~~~~~--------~~~~~~~~~~ 218 (411)
T KOG1203|consen 150 VPKGVVIVIKGAGGRPE---EEDIVTPEKVDYEGTKNLVDACKKAGVKRVVLVGSIGGTKFN--------QPPNILLLNG 218 (411)
T ss_pred ccccceeEEecccCCCC---cccCCCcceecHHHHHHHHHHHHHhCCceEEEEEeecCcccC--------CCchhhhhhh
Confidence 2 23345554443221 112223345778899999999999999999999886642110 11111 22
Q ss_pred hhHHhHHHHHHHHHHHHhhCCCCeEEEEecccc
Q 019795 155 PYGRTKQWCEEIAFDVQKADPEWRIILLRYFNP 187 (335)
Q Consensus 155 ~Y~~sK~~~E~~~~~~~~~~~~~~~~~lR~~~v 187 (335)
.+-.+|..+|+++.+ . +++.+++|++..
T Consensus 219 ~~~~~k~~~e~~~~~----S-gl~ytiIR~g~~ 246 (411)
T KOG1203|consen 219 LVLKAKLKAEKFLQD----S-GLPYTIIRPGGL 246 (411)
T ss_pred hhhHHHHhHHHHHHh----c-CCCcEEEecccc
Confidence 355788888888663 2 999999999764
|
|
| >KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.28 E-value=4.8e-12 Score=98.90 Aligned_cols=168 Identities=17% Similarity=0.210 Sum_probs=119.8
Q ss_pred CCCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc-
Q 019795 1 MASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS- 79 (335)
Q Consensus 1 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~- 79 (335)
|.++-..+|||+...+|+..++.|+++|..|.+++...++-.+..+++. .++.+..+|++.+++++.++..
T Consensus 6 s~kglvalvtggasglg~ataerlakqgasv~lldlp~skg~~vakelg--------~~~vf~padvtsekdv~aala~a 77 (260)
T KOG1199|consen 6 STKGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKELG--------GKVVFTPADVTSEKDVRAALAKA 77 (260)
T ss_pred hhcCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHHhC--------CceEEeccccCcHHHHHHHHHHH
Confidence 4566789999999999999999999999999999987776666655543 6889999999999999988875
Q ss_pred ----CCCCEEEEcccccc----------hhhhhcChHHHHHHhHHHHHHHHHHHHH----c-----CC-CEEEEeccccc
Q 019795 80 ----QKFEAVIHFGALKA----------VAESVQHPFRYFDNNLIGTINLYQAMAK----Y-----NC-KKLVFSSSATI 135 (335)
Q Consensus 80 ----~~~d~vi~~a~~~~----------~~~~~~~~~~~~~~nv~~~~~l~~~~~~----~-----~~-~~~v~~Ss~~v 135 (335)
++.|+.+||||+.. .....++...++++|+.||+|+++.-.. + |- ..+|++-|.+.
T Consensus 78 k~kfgrld~~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~aglmg~nepdq~gqrgviintasvaa 157 (260)
T KOG1199|consen 78 KAKFGRLDALVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGAGLMGENEPDQNGQRGVIINTASVAA 157 (260)
T ss_pred HhhccceeeeeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehhhhhcCCCCCCCCcceEEEeeceeee
Confidence 48999999999631 1224566778899999999999986321 1 11 24666666555
Q ss_pred cCCCCCCCccCCCCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccc
Q 019795 136 YGQPEKIPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNP 187 (335)
Q Consensus 136 yg~~~~~~~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v 187 (335)
|. ..-....|..||...--+..-.+++. -+++++.+-|+..
T Consensus 158 fd-----------gq~gqaaysaskgaivgmtlpiardla~~gir~~tiapglf 200 (260)
T KOG1199|consen 158 FD-----------GQTGQAAYSASKGAIVGMTLPIARDLAGDGIRFNTIAPGLF 200 (260)
T ss_pred ec-----------CccchhhhhcccCceEeeechhhhhcccCceEEEeeccccc
Confidence 52 12233468888865443333333322 1677777777653
|
|
| >PF13950 Epimerase_Csub: UDP-glucose 4-epimerase C-term subunit; PDB: 1EK5_A 1I3K_B 1I3M_B 1HZJ_A 1EK6_A 1I3N_A 1I3L_A 2CNB_B 1GY8_D 1NAI_A | Back alignment and domain information |
|---|
Probab=99.25 E-value=1.3e-11 Score=81.80 Aligned_cols=62 Identities=58% Similarity=1.144 Sum_probs=44.3
Q ss_pred HHHHHhCCCCCceeCCCCCCccceeeccHHHHHHhcCCccccCHHHHHHHHHHHHhcCCCCc
Q 019795 269 AFEKASGKKIPIKFCPRRVGDATAVYAATDKAHKELGWKPKYGIEDMCAHQWNWAKNNPMGY 330 (335)
Q Consensus 269 ~i~~~~g~~~~~~~~~~~~~~~~~~~~d~~k~~~~Lg~~p~~~~~~~~~~~~~~~~~~~~~~ 330 (335)
++.++.|+++++.+.+.+++++...+.|++|++++|||+|+++|+++++++++|+++|+.+|
T Consensus 1 A~e~vtG~~i~~~~~~rR~GD~~~~~Ad~~kA~~~LgW~p~~~L~~~i~~~w~W~~~np~Gy 62 (62)
T PF13950_consen 1 AFEKVTGKKIPVEYAPRRPGDPAHLVADISKAREELGWKPKYSLEDMIRDAWNWQKKNPNGY 62 (62)
T ss_dssp HHHHHHTS---EEEE---TT--SEE-B--HHHHHHC----SSSHHHHHHHHHHHHHHSTTTT
T ss_pred CcHHHHCCCCCceECCCCCCchhhhhCCHHHHHHHhCCCcCCCHHHHHHHHHHHHHHCcCCC
Confidence 36788999999999999999999999999999999999999999999999999999999886
|
... |
| >PTZ00325 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.22 E-value=1.1e-10 Score=103.98 Aligned_cols=175 Identities=18% Similarity=0.087 Sum_probs=121.4
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCC--CeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGG--FKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~ 79 (335)
.+|++|.|+|+.|.||+.++..|+.++ .+++++++.. .....-.+.+.. . .....+.+|+.++.+.++
T Consensus 6 ~~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~~--~~g~a~Dl~~~~-----~--~~~v~~~td~~~~~~~l~- 75 (321)
T PTZ00325 6 LKMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIVG--APGVAADLSHID-----T--PAKVTGYADGELWEKALR- 75 (321)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecCC--CcccccchhhcC-----c--CceEEEecCCCchHHHhC-
Confidence 578999999999999999999998654 7899999832 222122232211 1 223445666555556676
Q ss_pred CCCCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccCCCCC--CCccCCCCCCCCChhH
Q 019795 80 QKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQPEK--IPCVEDFPYGAMNPYG 157 (335)
Q Consensus 80 ~~~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~--~~~~e~~~~~~~~~Y~ 157 (335)
+.|+||++||.... ..++....+..|+.++.++++++++.+++++|.++|.-+-....- ....+....+|...||
T Consensus 76 -gaDvVVitaG~~~~--~~~tR~dll~~N~~i~~~i~~~i~~~~~~~iviv~SNPvdv~~~~~~~~~~~~sg~p~~~viG 152 (321)
T PTZ00325 76 -GADLVLICAGVPRK--PGMTRDDLFNTNAPIVRDLVAAVASSAPKAIVGIVSNPVNSTVPIAAETLKKAGVYDPRKLFG 152 (321)
T ss_pred -CCCEEEECCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCcHHHHHHHHHhhhhhccCCChhheee
Confidence 89999999998532 234567889999999999999999999999999999665321110 0112445566667788
Q ss_pred HhHHHHHHHHHHHHhhCCCCeEEEEecccccCCC
Q 019795 158 RTKQWCEEIAFDVQKADPEWRIILLRYFNPVGAH 191 (335)
Q Consensus 158 ~sK~~~E~~~~~~~~~~~~~~~~~lR~~~v~G~~ 191 (335)
.+-+-.-++-...++.. +.....++ +.|+|.|
T Consensus 153 ~g~LDs~R~r~~la~~l-~v~~~~V~-~~VlGeH 184 (321)
T PTZ00325 153 VTTLDVVRARKFVAEAL-GMNPYDVN-VPVVGGH 184 (321)
T ss_pred chhHHHHHHHHHHHHHh-CcChhheE-EEEEeec
Confidence 87555556655566665 77777777 6788887
|
|
| >KOG4288 consensus Predicted oxidoreductase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.22 E-value=1.2e-10 Score=95.41 Aligned_cols=154 Identities=20% Similarity=0.141 Sum_probs=115.3
Q ss_pred eEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCCCEE
Q 019795 6 NILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKFEAV 85 (335)
Q Consensus 6 ~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~d~v 85 (335)
..++.|+.||.|+++++.....++.|..+.|+..+... ..++..+.++.+|.....-+..... ++..+
T Consensus 54 ~tlvlggnpfsgs~vlk~A~~vv~svgilsen~~k~~l----------~sw~~~vswh~gnsfssn~~k~~l~--g~t~v 121 (283)
T KOG4288|consen 54 WTLVLGGNPFSGSEVLKNATNVVHSVGILSENENKQTL----------SSWPTYVSWHRGNSFSSNPNKLKLS--GPTFV 121 (283)
T ss_pred HHhhhcCCCcchHHHHHHHHhhceeeeEeecccCcchh----------hCCCcccchhhccccccCcchhhhc--CCccc
Confidence 47889999999999999999999999999987653221 1233678888888876665666665 67777
Q ss_pred EEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccCCCCCCCccCCCCCCCCChhHHhHHHHHH
Q 019795 86 IHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQWCEE 165 (335)
Q Consensus 86 i~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~Y~~sK~~~E~ 165 (335)
+-+++-. .+...+.++|=....+-++++.+.++++|+|+|... ||-. +.-|. .|-.+|..+|.
T Consensus 122 ~e~~ggf------gn~~~m~~ing~ani~a~kaa~~~gv~~fvyISa~d-~~~~---------~~i~r-GY~~gKR~AE~ 184 (283)
T KOG4288|consen 122 YEMMGGF------GNIILMDRINGTANINAVKAAAKAGVPRFVYISAHD-FGLP---------PLIPR-GYIEGKREAEA 184 (283)
T ss_pred HHHhcCc------cchHHHHHhccHhhHHHHHHHHHcCCceEEEEEhhh-cCCC---------Cccch-hhhccchHHHH
Confidence 7766542 233466778888888899999999999999999743 2211 23333 79999999997
Q ss_pred HHHHHHhhCCCCeEEEEecccccCCCC
Q 019795 166 IAFDVQKADPEWRIILLRYFNPVGAHE 192 (335)
Q Consensus 166 ~~~~~~~~~~~~~~~~lR~~~v~G~~~ 192 (335)
.+.. .+ .++-+++|||.+||.++
T Consensus 185 Ell~---~~-~~rgiilRPGFiyg~R~ 207 (283)
T KOG4288|consen 185 ELLK---KF-RFRGIILRPGFIYGTRN 207 (283)
T ss_pred HHHH---hc-CCCceeeccceeecccc
Confidence 7553 33 67889999999999853
|
|
| >KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.18 E-value=4.1e-10 Score=93.63 Aligned_cols=181 Identities=15% Similarity=0.192 Sum_probs=123.6
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCC-----CeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHH
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGG-----FKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKL 76 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g-----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~ 76 (335)
|+.|.+||||++..+|.+++.+|++.. .++.+.+|+.++.++...++.+..+ ....+++++.+|+++-.++.++
T Consensus 1 ~~RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p-~~~i~~~yvlvD~sNm~Sv~~A 79 (341)
T KOG1478|consen 1 MMRKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHP-KSTIEVTYVLVDVSNMQSVFRA 79 (341)
T ss_pred CCceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCC-CceeEEEEEEEehhhHHHHHHH
Confidence 346889999999999999999999864 3466779999999998888876554 2346789999999997766655
Q ss_pred Hhc-----CCCCEEEEcccccchhh-------------------------------hhcChHHHHHHhHHHHHHHHHHHH
Q 019795 77 FSS-----QKFEAVIHFGALKAVAE-------------------------------SVQHPFRYFDNNLIGTINLYQAMA 120 (335)
Q Consensus 77 ~~~-----~~~d~vi~~a~~~~~~~-------------------------------~~~~~~~~~~~nv~~~~~l~~~~~ 120 (335)
... .+.|.|+-+||...... +.++...+|+.||.|...+++.+.
T Consensus 80 ~~di~~rf~~ld~iylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D~lg~iFetnVFGhfyli~~l~ 159 (341)
T KOG1478|consen 80 SKDIKQRFQRLDYIYLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISADGLGEIFETNVFGHFYLIRELE 159 (341)
T ss_pred HHHHHHHhhhccEEEEccccCCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceecccchhhHhhhcccchhhhHhhhh
Confidence 442 27899999998643211 223444789999999999998865
Q ss_pred Hc----CCCEEEEeccccccCCCCCCCccCCC-CCCCCChhHHhHHHHHHHHHHHHhhCC--CCeEEEEeccc
Q 019795 121 KY----NCKKLVFSSSATIYGQPEKIPCVEDF-PYGAMNPYGRTKQWCEEIAFDVQKADP--EWRIILLRYFN 186 (335)
Q Consensus 121 ~~----~~~~~v~~Ss~~vyg~~~~~~~~e~~-~~~~~~~Y~~sK~~~E~~~~~~~~~~~--~~~~~~lR~~~ 186 (335)
.. ...++|.+||...- ....--||. ......+|..||.+.+.+-.+..+... |+..-++-|+.
T Consensus 160 pll~~~~~~~lvwtSS~~a~---kk~lsleD~q~~kg~~pY~sSKrl~DlLh~A~~~~~~~~g~~qyvv~pg~ 229 (341)
T KOG1478|consen 160 PLLCHSDNPQLVWTSSRMAR---KKNLSLEDFQHSKGKEPYSSSKRLTDLLHVALNRNFKPLGINQYVVQPGI 229 (341)
T ss_pred hHhhcCCCCeEEEEeecccc---cccCCHHHHhhhcCCCCcchhHHHHHHHHHHHhccccccchhhhcccCce
Confidence 43 23489999995431 111222332 234456899999998766444433321 34444455543
|
|
| >PLN00106 malate dehydrogenase | Back alignment and domain information |
|---|
Probab=99.15 E-value=4.7e-10 Score=100.02 Aligned_cols=173 Identities=18% Similarity=0.087 Sum_probs=121.1
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhCC--CeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCC
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQGG--FKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQK 81 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~ 81 (335)
.++|.|+|++|.||+.++..|+.++ .+++++++.+ .....-.+.+.. . .....++.+.+++.+.++ +
T Consensus 18 ~~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~--~~g~a~Dl~~~~-----~--~~~i~~~~~~~d~~~~l~--~ 86 (323)
T PLN00106 18 GFKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIAN--TPGVAADVSHIN-----T--PAQVRGFLGDDQLGDALK--G 86 (323)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCC--CCeeEchhhhCC-----c--CceEEEEeCCCCHHHHcC--C
Confidence 4689999999999999999999765 4799999876 221122222211 1 112335444555777777 8
Q ss_pred CCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccCCCCC--CCccCCCCCCCCChhHHh
Q 019795 82 FEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQPEK--IPCVEDFPYGAMNPYGRT 159 (335)
Q Consensus 82 ~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~--~~~~e~~~~~~~~~Y~~s 159 (335)
.|+|||+||.... ..+..+.....|+..+.++.+.+++.+.+.+|+++|--+-+...- ........++|...||.+
T Consensus 87 aDiVVitAG~~~~--~g~~R~dll~~N~~i~~~i~~~i~~~~p~aivivvSNPvD~~~~i~t~~~~~~s~~p~~~viG~~ 164 (323)
T PLN00106 87 ADLVIIPAGVPRK--PGMTRDDLFNINAGIVKTLCEAVAKHCPNALVNIISNPVNSTVPIAAEVLKKAGVYDPKKLFGVT 164 (323)
T ss_pred CCEEEEeCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHHHHcCCCCcceEEEEe
Confidence 9999999998543 235567889999999999999999999888888887332110000 011233456677789999
Q ss_pred HHHHHHHHHHHHhhCCCCeEEEEecccccCCC
Q 019795 160 KQWCEEIAFDVQKADPEWRIILLRYFNPVGAH 191 (335)
Q Consensus 160 K~~~E~~~~~~~~~~~~~~~~~lR~~~v~G~~ 191 (335)
++..+++-..++++. +++...+.- .|+|.|
T Consensus 165 ~LDs~Rl~~~lA~~l-gv~~~~V~~-~ViGeH 194 (323)
T PLN00106 165 TLDVVRANTFVAEKK-GLDPADVDV-PVVGGH 194 (323)
T ss_pred cchHHHHHHHHHHHh-CCChhheEE-EEEEeC
Confidence 988888888888887 887777754 567775
|
|
| >PRK08309 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.13 E-value=3.7e-10 Score=92.32 Aligned_cols=103 Identities=17% Similarity=0.226 Sum_probs=76.2
Q ss_pred CeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc-----
Q 019795 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS----- 79 (335)
Q Consensus 5 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~----- 79 (335)
|+++|||||||+|. +++.|+++|++|++++|++.........+.. ...+.++.+|++|++++.++++.
T Consensus 1 m~vlVtGGtG~gg~-la~~L~~~G~~V~v~~R~~~~~~~l~~~l~~------~~~i~~~~~Dv~d~~sv~~~i~~~l~~~ 73 (177)
T PRK08309 1 MHALVIGGTGMLKR-VSLWLCEKGFHVSVIARREVKLENVKRESTT------PESITPLPLDYHDDDALKLAIKSTIEKN 73 (177)
T ss_pred CEEEEECcCHHHHH-HHHHHHHCcCEEEEEECCHHHHHHHHHHhhc------CCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 47999999988876 9999999999999999865432222221211 14678899999999999888874
Q ss_pred CCCCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCC----EEEEecc
Q 019795 80 QKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCK----KLVFSSS 132 (335)
Q Consensus 80 ~~~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~----~~v~~Ss 132 (335)
..+|.+|+.. .+.++.++..+|++.+++ +++|+=.
T Consensus 74 g~id~lv~~v------------------h~~~~~~~~~~~~~~gv~~~~~~~~h~~g 112 (177)
T PRK08309 74 GPFDLAVAWI------------------HSSAKDALSVVCRELDGSSETYRLFHVLG 112 (177)
T ss_pred CCCeEEEEec------------------cccchhhHHHHHHHHccCCCCceEEEEeC
Confidence 3567777532 344677899999999988 8887554
|
|
| >PRK13656 trans-2-enoyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.89 E-value=1.3e-07 Score=85.30 Aligned_cols=85 Identities=18% Similarity=0.105 Sum_probs=62.3
Q ss_pred CCCeEEEEcCCChhhHH--HHHHHHhCCCeEEEEecCCCCch-----------hhHHhhhhhcCCccccceeEEEccCCC
Q 019795 3 SEKNILVTGGAGFIGTH--CALQLLQGGFKVVLIDNLHNSVP-----------EAVDRVKDLAGPELAKKLEFHVGDLRN 69 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~--l~~~L~~~g~~V~~~~r~~~~~~-----------~~~~~~~~~~~~~~~~~i~~~~~Dl~d 69 (335)
.+|++||||+++.+|.+ +++.| +.|++|+++++...... .......+.. ......+.+|+++
T Consensus 40 ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~----G~~a~~i~~DVss 114 (398)
T PRK13656 40 GPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAA----GLYAKSINGDAFS 114 (398)
T ss_pred CCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhc----CCceEEEEcCCCC
Confidence 35899999999999999 89999 99999998886432211 1111111111 1346678999999
Q ss_pred HHHHHHHHhc-----CCCCEEEEccccc
Q 019795 70 KDDLDKLFSS-----QKFEAVIHFGALK 92 (335)
Q Consensus 70 ~~~~~~~~~~-----~~~d~vi~~a~~~ 92 (335)
++++.++++. +++|++||++|..
T Consensus 115 ~E~v~~lie~I~e~~G~IDiLVnSaA~~ 142 (398)
T PRK13656 115 DEIKQKVIELIKQDLGQVDLVVYSLASP 142 (398)
T ss_pred HHHHHHHHHHHHHhcCCCCEEEECCccC
Confidence 9988877764 4799999999875
|
|
| >COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.86 E-value=1.6e-08 Score=91.38 Aligned_cols=98 Identities=27% Similarity=0.303 Sum_probs=77.3
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhCC-CeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCC
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQGG-FKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKF 82 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~ 82 (335)
||+|||.|+ |+||+.+++.|+++| .+|++.+|+..+...... .. ..+++.+..|+.|.+.+.++++ +.
T Consensus 1 m~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~----~~----~~~v~~~~vD~~d~~al~~li~--~~ 69 (389)
T COG1748 1 MMKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAE----LI----GGKVEALQVDAADVDALVALIK--DF 69 (389)
T ss_pred CCcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHh----hc----cccceeEEecccChHHHHHHHh--cC
Confidence 679999999 999999999999998 999999997655433322 11 1479999999999999999999 66
Q ss_pred CEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEec
Q 019795 83 EAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSS 131 (335)
Q Consensus 83 d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~S 131 (335)
|+|||++.... ...++++|.+.|+ .+|-+|
T Consensus 70 d~VIn~~p~~~------------------~~~i~ka~i~~gv-~yvDts 99 (389)
T COG1748 70 DLVINAAPPFV------------------DLTILKACIKTGV-DYVDTS 99 (389)
T ss_pred CEEEEeCCchh------------------hHHHHHHHHHhCC-CEEEcc
Confidence 99999987632 1258888988885 444433
|
|
| >PRK09620 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.82 E-value=1.3e-08 Score=86.55 Aligned_cols=83 Identities=24% Similarity=0.366 Sum_probs=58.1
Q ss_pred CCCCeEEEEcCC----------------ChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEc
Q 019795 2 ASEKNILVTGGA----------------GFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVG 65 (335)
Q Consensus 2 ~~~~~vlItGat----------------G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 65 (335)
|.+|+||||+|. ||+|++|+++|+++|++|++++......... +. ....+..+..
T Consensus 1 l~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~~~~~~~~---~~------~~~~~~~V~s 71 (229)
T PRK09620 1 MKGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGYFAEKPND---IN------NQLELHPFEG 71 (229)
T ss_pred CCCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCCCcCCCcc---cC------CceeEEEEec
Confidence 478999999886 9999999999999999999987632211100 00 0023344556
Q ss_pred cCCCHHHHHHHHhcCCCCEEEEcccccc
Q 019795 66 DLRNKDDLDKLFSSQKFEAVIHFGALKA 93 (335)
Q Consensus 66 Dl~d~~~~~~~~~~~~~d~vi~~a~~~~ 93 (335)
|....+.+.+++...++|+|||+||...
T Consensus 72 ~~d~~~~l~~~~~~~~~D~VIH~AAvsD 99 (229)
T PRK09620 72 IIDLQDKMKSIITHEKVDAVIMAAAGSD 99 (229)
T ss_pred HHHHHHHHHHHhcccCCCEEEECccccc
Confidence 4444457788886557999999999843
|
|
| >cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases | Back alignment and domain information |
|---|
Probab=98.68 E-value=2.4e-07 Score=83.19 Aligned_cols=116 Identities=20% Similarity=0.193 Sum_probs=78.3
Q ss_pred CeEEEEcCCChhhHHHHHHHHhCC-------CeEEEEecCCCC--chhhHHhhhhhcCCccccceeEEEccCCCHHHHHH
Q 019795 5 KNILVTGGAGFIGTHCALQLLQGG-------FKVVLIDNLHNS--VPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDK 75 (335)
Q Consensus 5 ~~vlItGatG~iG~~l~~~L~~~g-------~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~ 75 (335)
.+|+||||+|++|++++..|+..+ .+++++++.+.. .....-.+.+.. .....|+....++.+
T Consensus 3 ~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~Dl~d~~--------~~~~~~~~~~~~~~~ 74 (325)
T cd01336 3 IRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVMELQDCA--------FPLLKSVVATTDPEE 74 (325)
T ss_pred eEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceeeehhhcc--------ccccCCceecCCHHH
Confidence 479999999999999999999844 589999986532 111111111100 011224444456666
Q ss_pred HHhcCCCCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcC-CC-EEEEecc
Q 019795 76 LFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYN-CK-KLVFSSS 132 (335)
Q Consensus 76 ~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~-~~v~~Ss 132 (335)
.++ ++|+|||+||.... ..++..+.++.|+.....+.+.+.+.. .+ .+|.+|.
T Consensus 75 ~l~--~aDiVI~tAG~~~~--~~~~R~~l~~~N~~i~~~i~~~i~~~~~~~~iiivvsN 129 (325)
T cd01336 75 AFK--DVDVAILVGAMPRK--EGMERKDLLKANVKIFKEQGEALDKYAKKNVKVLVVGN 129 (325)
T ss_pred HhC--CCCEEEEeCCcCCC--CCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEecC
Confidence 777 89999999998532 234456889999999999999988873 33 4555654
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases | Back alignment and domain information |
|---|
Probab=98.62 E-value=3.7e-07 Score=81.84 Aligned_cols=169 Identities=15% Similarity=0.117 Sum_probs=115.2
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhCCC-------eEEEEecCCCC--chhhHHhhhhhcCCccccceeEEEccCCCHHHHH
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQGGF-------KVVLIDNLHNS--VPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLD 74 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~g~-------~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~ 74 (335)
.++|.|+|++|.||+.++..|+..|. ++++++..+.. .....-.+.+...+.. ..+.+. . .+ .
T Consensus 2 p~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~-~~~~i~-~-----~~-~ 73 (322)
T cd01338 2 PVRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLL-AEIVIT-D-----DP-N 73 (322)
T ss_pred CeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhcccccc-CceEEe-c-----Cc-H
Confidence 46899999999999999999998774 79999985433 3333334443321111 122221 1 11 2
Q ss_pred HHHhcCCCCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCC-C-EEEEecccc-c--cCCCCCCCccCCCC
Q 019795 75 KLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNC-K-KLVFSSSAT-I--YGQPEKIPCVEDFP 149 (335)
Q Consensus 75 ~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~-~-~~v~~Ss~~-v--yg~~~~~~~~e~~~ 149 (335)
+.++ +.|+||.+||.... ..++-...+..|+.....+.+.+.+.+. . .+|.+|.-. + | ......+
T Consensus 74 ~~~~--daDivvitaG~~~k--~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvsNPvD~~t~------~~~k~sg 143 (322)
T cd01338 74 VAFK--DADWALLVGAKPRG--PGMERADLLKANGKIFTAQGKALNDVASRDVKVLVVGNPCNTNAL------IAMKNAP 143 (322)
T ss_pred HHhC--CCCEEEEeCCCCCC--CCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEecCcHHHHHH------HHHHHcC
Confidence 3344 78999999998532 2344557899999999999999988762 3 555565411 1 1 0111122
Q ss_pred -CCCCChhHHhHHHHHHHHHHHHhhCCCCeEEEEecccccCCC
Q 019795 150 -YGAMNPYGRTKQWCEEIAFDVQKADPEWRIILLRYFNPVGAH 191 (335)
Q Consensus 150 -~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~lR~~~v~G~~ 191 (335)
.++...||.+++..+++...+++.. +.+...+|..+|||+|
T Consensus 144 ~~p~~~ViG~t~LDs~Rl~~~la~~l-gv~~~~v~~~~V~GeH 185 (322)
T cd01338 144 DIPPDNFTAMTRLDHNRAKSQLAKKA-GVPVTDVKNMVIWGNH 185 (322)
T ss_pred CCChHheEEehHHHHHHHHHHHHHHh-CcChhHeEEEEEEeCC
Confidence 5556689999999999999898888 9999999998999997
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >COG0623 FabI Enoyl-[acyl-carrier-protein] | Back alignment and domain information |
|---|
Probab=98.56 E-value=5.5e-06 Score=68.58 Aligned_cols=156 Identities=20% Similarity=0.144 Sum_probs=106.3
Q ss_pred CCCCeEEEEcCC--ChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc
Q 019795 2 ASEKNILVTGGA--GFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS 79 (335)
Q Consensus 2 ~~~~~vlItGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~ 79 (335)
|.+|++||+|-. .-|+..+++.|.++|.++......+ ...+++.++.++. ..-.++++|+++.++++++|..
T Consensus 4 L~GK~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e----~l~krv~~la~~~--~s~~v~~cDV~~d~~i~~~f~~ 77 (259)
T COG0623 4 LEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGE----RLEKRVEELAEEL--GSDLVLPCDVTNDESIDALFAT 77 (259)
T ss_pred cCCceEEEEEecccccHHHHHHHHHHHcCCEEEEEeccH----HHHHHHHHHHhhc--cCCeEEecCCCCHHHHHHHHHH
Confidence 678999999975 4799999999999999988877654 3334444433211 2345799999999999998875
Q ss_pred -----CCCCEEEEcccccc--------hhhhhcChHHHHHHhHHHHHHHHHHHHHc--CCCEEEEeccccccCCCCCCCc
Q 019795 80 -----QKFEAVIHFGALKA--------VAESVQHPFRYFDNNLIGTINLYQAMAKY--NCKKLVFSSSATIYGQPEKIPC 144 (335)
Q Consensus 80 -----~~~d~vi~~a~~~~--------~~~~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~v~~Ss~~vyg~~~~~~~ 144 (335)
.++|.++|+-++.. ...+.+.+...+++...+...++++++.. .-..+|.++= +|...
T Consensus 78 i~~~~g~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~~ggSiltLtY---lgs~r---- 150 (259)
T COG0623 78 IKKKWGKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLMNNGGSILTLTY---LGSER---- 150 (259)
T ss_pred HHHhhCcccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcCCCCcEEEEEe---cccee----
Confidence 58999999988742 12234455556666666666777777653 1234553331 11110
Q ss_pred cCCCCCCCCChhHHhHHHHHHHHHHHHhhC
Q 019795 145 VEDFPYGAMNPYGRTKQWCEEIAFDVQKAD 174 (335)
Q Consensus 145 ~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~ 174 (335)
..+..+.-|..|+..|.-++..+.+.
T Consensus 151 ----~vPnYNvMGvAKAaLEasvRyLA~dl 176 (259)
T COG0623 151 ----VVPNYNVMGVAKAALEASVRYLAADL 176 (259)
T ss_pred ----ecCCCchhHHHHHHHHHHHHHHHHHh
Confidence 22334578999999999999887764
|
|
| >TIGR00715 precor6x_red precorrin-6x reductase | Back alignment and domain information |
|---|
Probab=98.54 E-value=9.8e-07 Score=76.23 Aligned_cols=98 Identities=11% Similarity=0.061 Sum_probs=74.3
Q ss_pred CeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCCCE
Q 019795 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKFEA 84 (335)
Q Consensus 5 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~d~ 84 (335)
|+|||+||||. |+.|++.|.+.|++|++..++......... .+...+..+..|.+++.+++.+.++|+
T Consensus 1 m~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~~~~~-----------~g~~~v~~g~l~~~~l~~~l~~~~i~~ 68 (256)
T TIGR00715 1 MTVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGKHLYPI-----------HQALTVHTGALDPQELREFLKRHSIDI 68 (256)
T ss_pred CeEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCccccccc-----------cCCceEEECCCCHHHHHHHHHhcCCCE
Confidence 58999999999 999999999999999999887654322111 123456677788888999999889999
Q ss_pred EEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEE
Q 019795 85 VIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVF 129 (335)
Q Consensus 85 vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~ 129 (335)
||+++.... ...+.++.++|++.++..+=|
T Consensus 69 VIDAtHPfA---------------~~is~~a~~a~~~~~ipylR~ 98 (256)
T TIGR00715 69 LVDATHPFA---------------AQITTNATAVCKELGIPYVRF 98 (256)
T ss_pred EEEcCCHHH---------------HHHHHHHHHHHHHhCCcEEEE
Confidence 999766532 234567889999998765544
|
This enzyme was found to be a monomer by gel filtration. |
| >PRK06732 phosphopantothenate--cysteine ligase; Validated | Back alignment and domain information |
|---|
Probab=98.53 E-value=3.6e-07 Score=78.00 Aligned_cols=68 Identities=22% Similarity=0.290 Sum_probs=46.3
Q ss_pred CCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCC--HHHHHHHHhcCCCCEEEEcc
Q 019795 12 GAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRN--KDDLDKLFSSQKFEAVIHFG 89 (335)
Q Consensus 12 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d--~~~~~~~~~~~~~d~vi~~a 89 (335)
+|||+|++|+++|+++|++|++++|....... ...++.++.++..+ .+.+.+.+. ++|+|||+|
T Consensus 24 SSG~iG~aLA~~L~~~G~~V~li~r~~~~~~~------------~~~~v~~i~v~s~~~m~~~l~~~~~--~~DivIh~A 89 (229)
T PRK06732 24 STGQLGKIIAETFLAAGHEVTLVTTKTAVKPE------------PHPNLSIIEIENVDDLLETLEPLVK--DHDVLIHSM 89 (229)
T ss_pred cchHHHHHHHHHHHhCCCEEEEEECcccccCC------------CCCCeEEEEEecHHHHHHHHHHHhc--CCCEEEeCC
Confidence 48899999999999999999999875321100 01345666544322 234555555 789999999
Q ss_pred cccc
Q 019795 90 ALKA 93 (335)
Q Consensus 90 ~~~~ 93 (335)
|+..
T Consensus 90 Avsd 93 (229)
T PRK06732 90 AVSD 93 (229)
T ss_pred ccCC
Confidence 9853
|
|
| >cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase | Back alignment and domain information |
|---|
Probab=98.50 E-value=6.5e-07 Score=74.66 Aligned_cols=82 Identities=21% Similarity=0.250 Sum_probs=62.6
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCC
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKF 82 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~ 82 (335)
++++++|+||+|.+|+.+++.|++.|++|++++|+..+.....+.+.+. .+......|..+.+++.+++. +.
T Consensus 27 ~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~------~~~~~~~~~~~~~~~~~~~~~--~~ 98 (194)
T cd01078 27 KGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRAR------FGEGVGAVETSDDAARAAAIK--GA 98 (194)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhh------cCCcEEEeeCCCHHHHHHHHh--cC
Confidence 5689999999999999999999999999999998754444333333211 134456678889888888887 78
Q ss_pred CEEEEccccc
Q 019795 83 EAVIHFGALK 92 (335)
Q Consensus 83 d~vi~~a~~~ 92 (335)
|+||++....
T Consensus 99 diVi~at~~g 108 (194)
T cd01078 99 DVVFAAGAAG 108 (194)
T ss_pred CEEEECCCCC
Confidence 9999976553
|
Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo |
| >KOG2733 consensus Uncharacterized membrane protein [Function unknown] | Back alignment and domain information |
|---|
Probab=98.47 E-value=5.6e-07 Score=78.81 Aligned_cols=84 Identities=15% Similarity=0.375 Sum_probs=72.2
Q ss_pred eEEEEcCCChhhHHHHHHHHh----CCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCC
Q 019795 6 NILVTGGAGFIGTHCALQLLQ----GGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQK 81 (335)
Q Consensus 6 ~vlItGatG~iG~~l~~~L~~----~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~ 81 (335)
.++|.|||||-|.++++.+.+ .|...-+.+|++.+..+....+.+-.+.+++..+ ++.+|.+|++++.+..+ .
T Consensus 7 DvVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~-i~i~D~~n~~Sl~emak--~ 83 (423)
T KOG2733|consen 7 DVVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSV-ILIADSANEASLDEMAK--Q 83 (423)
T ss_pred eEEEEccccccceeeHHHHhhhhcccCceEEEecCCHHHHHHHHHHHhhccCCCcccce-EEEecCCCHHHHHHHHh--h
Confidence 489999999999999999999 6788888899988888877777665555555566 88999999999999999 7
Q ss_pred CCEEEEccccc
Q 019795 82 FEAVIHFGALK 92 (335)
Q Consensus 82 ~d~vi~~a~~~ 92 (335)
.-+|+||+|+-
T Consensus 84 ~~vivN~vGPy 94 (423)
T KOG2733|consen 84 ARVIVNCVGPY 94 (423)
T ss_pred hEEEEeccccc
Confidence 79999999973
|
|
| >PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase | Back alignment and domain information |
|---|
Probab=98.47 E-value=9.1e-07 Score=81.99 Aligned_cols=96 Identities=23% Similarity=0.303 Sum_probs=68.0
Q ss_pred EEEEcCCChhhHHHHHHHHhCC-C-eEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCCCE
Q 019795 7 ILVTGGAGFIGTHCALQLLQGG-F-KVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKFEA 84 (335)
Q Consensus 7 vlItGatG~iG~~l~~~L~~~g-~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~d~ 84 (335)
|+|.|+ |++|+.+++.|++.+ . +|++.+|+..+.....+.+ ...++..+.+|+.|.+++.++++ +.|+
T Consensus 1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~-------~~~~~~~~~~d~~~~~~l~~~~~--~~dv 70 (386)
T PF03435_consen 1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKL-------LGDRVEAVQVDVNDPESLAELLR--GCDV 70 (386)
T ss_dssp EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT---------TTTTEEEEE--TTTHHHHHHHHT--TSSE
T ss_pred CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhc-------cccceeEEEEecCCHHHHHHHHh--cCCE
Confidence 789999 999999999999986 4 7999999765544333222 12689999999999999999999 7799
Q ss_pred EEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEec
Q 019795 85 VIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSS 131 (335)
Q Consensus 85 vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~S 131 (335)
||||++... ...++++|.+.|+ ++|-+|
T Consensus 71 Vin~~gp~~------------------~~~v~~~~i~~g~-~yvD~~ 98 (386)
T PF03435_consen 71 VINCAGPFF------------------GEPVARACIEAGV-HYVDTS 98 (386)
T ss_dssp EEE-SSGGG------------------HHHHHHHHHHHT--EEEESS
T ss_pred EEECCccch------------------hHHHHHHHHHhCC-Ceeccc
Confidence 999998741 1147777777775 555533
|
Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A. |
| >PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated | Back alignment and domain information |
|---|
Probab=98.42 E-value=1.1e-06 Score=80.99 Aligned_cols=75 Identities=20% Similarity=0.276 Sum_probs=59.3
Q ss_pred CCCCeEEEEcC----------------CChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEc
Q 019795 2 ASEKNILVTGG----------------AGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVG 65 (335)
Q Consensus 2 ~~~~~vlItGa----------------tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 65 (335)
+++|+|||||| ||.+|.+++++|.++|++|+++++... .. . +.. ....
T Consensus 186 l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~-~~-----~--------~~~--~~~~ 249 (399)
T PRK05579 186 LAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVN-LP-----T--------PAG--VKRI 249 (399)
T ss_pred cCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCcc-cc-----C--------CCC--cEEE
Confidence 46899999999 899999999999999999999987542 10 0 012 3457
Q ss_pred cCCCHHHHHHHHhc--CCCCEEEEccccc
Q 019795 66 DLRNKDDLDKLFSS--QKFEAVIHFGALK 92 (335)
Q Consensus 66 Dl~d~~~~~~~~~~--~~~d~vi~~a~~~ 92 (335)
|+++.+++.+.+.+ ..+|++||+||+.
T Consensus 250 dv~~~~~~~~~v~~~~~~~DilI~~Aav~ 278 (399)
T PRK05579 250 DVESAQEMLDAVLAALPQADIFIMAAAVA 278 (399)
T ss_pred ccCCHHHHHHHHHHhcCCCCEEEEccccc
Confidence 99998888877764 3689999999974
|
|
| >PRK05086 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.38 E-value=4.4e-06 Score=74.71 Aligned_cols=115 Identities=20% Similarity=0.119 Sum_probs=78.2
Q ss_pred CeEEEEcCCChhhHHHHHHHHh---CCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCC
Q 019795 5 KNILVTGGAGFIGTHCALQLLQ---GGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQK 81 (335)
Q Consensus 5 ~~vlItGatG~iG~~l~~~L~~---~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~ 81 (335)
|+|+|+||||.+|++++..|.. .+++++++++++. .....-.+.+. +....+.+ .+.+++.+.++ +
T Consensus 1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~-~~g~alDl~~~------~~~~~i~~--~~~~d~~~~l~--~ 69 (312)
T PRK05086 1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPV-TPGVAVDLSHI------PTAVKIKG--FSGEDPTPALE--G 69 (312)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCC-CcceehhhhcC------CCCceEEE--eCCCCHHHHcC--C
Confidence 6899999999999999998855 2467888888643 21111112110 11122333 22234445555 6
Q ss_pred CCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEecc
Q 019795 82 FEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSS 132 (335)
Q Consensus 82 ~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss 132 (335)
.|+||.++|.... ..+.....+..|+..+..+++++++.+.+++|.+.|
T Consensus 70 ~DiVIitaG~~~~--~~~~R~dll~~N~~i~~~ii~~i~~~~~~~ivivvs 118 (312)
T PRK05086 70 ADVVLISAGVARK--PGMDRSDLFNVNAGIVKNLVEKVAKTCPKACIGIIT 118 (312)
T ss_pred CCEEEEcCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcc
Confidence 8999999998543 233456789999999999999999998888887776
|
|
| >cd00704 MDH Malate dehydrogenase | Back alignment and domain information |
|---|
Probab=98.28 E-value=1.2e-05 Score=72.07 Aligned_cols=115 Identities=22% Similarity=0.251 Sum_probs=74.3
Q ss_pred eEEEEcCCChhhHHHHHHHHhCC-------CeEEEEecCC--CCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHH
Q 019795 6 NILVTGGAGFIGTHCALQLLQGG-------FKVVLIDNLH--NSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKL 76 (335)
Q Consensus 6 ~vlItGatG~iG~~l~~~L~~~g-------~~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~ 76 (335)
+|.|+||+|.+|++++..|+..| ++++++++.+ .......-.+.+...+.. ... .+. ....+.
T Consensus 2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~~~~~g~~~Dl~d~~~~~~-~~~-----~i~--~~~~~~ 73 (323)
T cd00704 2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAMKALEGVVMELQDCAFPLL-KGV-----VIT--TDPEEA 73 (323)
T ss_pred EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCccCccceeeeehhhhccccc-CCc-----EEe--cChHHH
Confidence 78999999999999999998765 2588998875 322222222222110000 011 111 223455
Q ss_pred HhcCCCCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcC-CC-EEEEecc
Q 019795 77 FSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYN-CK-KLVFSSS 132 (335)
Q Consensus 77 ~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~-~~v~~Ss 132 (335)
++ +.|+|||+||.+.. ..++-...+..|+.....+...+++.. .. .+|.+|.
T Consensus 74 ~~--~aDiVVitAG~~~~--~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvsN 127 (323)
T cd00704 74 FK--DVDVAILVGAFPRK--PGMERADLLRKNAKIFKEQGEALNKVAKPTVKVLVVGN 127 (323)
T ss_pred hC--CCCEEEEeCCCCCC--cCCcHHHHHHHhHHHHHHHHHHHHHhCCCCeEEEEeCC
Confidence 65 78999999998532 234556789999999999999998883 44 4555553
|
Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal | Back alignment and domain information |
|---|
Probab=98.21 E-value=4e-06 Score=71.50 Aligned_cols=64 Identities=20% Similarity=0.308 Sum_probs=46.2
Q ss_pred CCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc-----CCCCEEE
Q 019795 12 GAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-----QKFEAVI 86 (335)
Q Consensus 12 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-----~~~d~vi 86 (335)
+||+||++++++|+++|++|+++++... +. . .....+|+.+.+++.++++. ..+|++|
T Consensus 23 SSGgIG~AIA~~la~~Ga~Vvlv~~~~~--------l~--------~-~~~~~~Dv~d~~s~~~l~~~v~~~~g~iDiLV 85 (227)
T TIGR02114 23 STGHLGKIITETFLSAGHEVTLVTTKRA--------LK--------P-EPHPNLSIREIETTKDLLITLKELVQEHDILI 85 (227)
T ss_pred cccHHHHHHHHHHHHCCCEEEEEcChhh--------cc--------c-ccCCcceeecHHHHHHHHHHHHHHcCCCCEEE
Confidence 3889999999999999999999875211 00 0 00134688887777765543 3689999
Q ss_pred Eccccc
Q 019795 87 HFGALK 92 (335)
Q Consensus 87 ~~a~~~ 92 (335)
|+||+.
T Consensus 86 nnAgv~ 91 (227)
T TIGR02114 86 HSMAVS 91 (227)
T ss_pred ECCEec
Confidence 999974
|
In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity. |
| >PRK12548 shikimate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.19 E-value=5.9e-06 Score=73.24 Aligned_cols=81 Identities=16% Similarity=0.243 Sum_probs=59.7
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCe-EEEEecCC---CCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHh
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFK-VVLIDNLH---NSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFS 78 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~-V~~~~r~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~ 78 (335)
++|+++|+|| |++|++++..|++.|+. |++++|+. .+..+..+.+.+.. ..+.....|+.+.+++.+.+.
T Consensus 125 ~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~-----~~~~~~~~d~~~~~~~~~~~~ 198 (289)
T PRK12548 125 KGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEV-----PECIVNVYDLNDTEKLKAEIA 198 (289)
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcC-----CCceeEEechhhhhHHHhhhc
Confidence 5689999999 89999999999999986 99999975 23333333332211 234556778888888888777
Q ss_pred cCCCCEEEEcccc
Q 019795 79 SQKFEAVIHFGAL 91 (335)
Q Consensus 79 ~~~~d~vi~~a~~ 91 (335)
..|+|||+...
T Consensus 199 --~~DilINaTp~ 209 (289)
T PRK12548 199 --SSDILVNATLV 209 (289)
T ss_pred --cCCEEEEeCCC
Confidence 67999997655
|
|
| >TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent | Back alignment and domain information |
|---|
Probab=98.18 E-value=2.3e-05 Score=70.42 Aligned_cols=106 Identities=22% Similarity=0.180 Sum_probs=73.6
Q ss_pred eEEEEcCCChhhHHHHHHHHhCCC-------eEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHH-------
Q 019795 6 NILVTGGAGFIGTHCALQLLQGGF-------KVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKD------- 71 (335)
Q Consensus 6 ~vlItGatG~iG~~l~~~L~~~g~-------~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~------- 71 (335)
+|.|+|++|.+|++++..|...+. +++++++.+... ..+-...|+.|..
T Consensus 1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~-----------------~a~g~~~Dl~d~~~~~~~~~ 63 (324)
T TIGR01758 1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMK-----------------VLEGVVMELMDCAFPLLDGV 63 (324)
T ss_pred CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCccc-----------------ccceeEeehhcccchhcCce
Confidence 589999999999999999987542 588998854431 0112233333322
Q ss_pred ----HHHHHHhcCCCCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcC-C-CEEEEecc
Q 019795 72 ----DLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYN-C-KKLVFSSS 132 (335)
Q Consensus 72 ----~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~-~~~v~~Ss 132 (335)
+..+.++ +.|+||++||.+.. ..++..+.+..|+.....+.+.+.+.. . ..+|.+|.
T Consensus 64 ~~~~~~~~~~~--~aDiVVitAG~~~~--~~~tr~~ll~~N~~i~k~i~~~i~~~~~~~~iiivvsN 126 (324)
T TIGR01758 64 VPTHDPAVAFT--DVDVAILVGAFPRK--EGMERRDLLSKNVKIFKEQGRALDKLAKKDCKVLVVGN 126 (324)
T ss_pred eccCChHHHhC--CCCEEEEcCCCCCC--CCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeCC
Confidence 2234455 78999999998633 234467889999999999999998873 4 35555554
|
This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography |
| >PRK14982 acyl-ACP reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.12 E-value=7.5e-06 Score=73.38 Aligned_cols=72 Identities=18% Similarity=0.312 Sum_probs=51.1
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhC-C-CeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQG-G-FKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~-g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~ 79 (335)
+++|+|+||||+|+||+.++++|+++ | .++++++|+.........+ +..+|+. ++.+++.
T Consensus 153 l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~e--------------l~~~~i~---~l~~~l~- 214 (340)
T PRK14982 153 LSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAE--------------LGGGKIL---SLEEALP- 214 (340)
T ss_pred cCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHH--------------hccccHH---hHHHHHc-
Confidence 46799999999999999999999864 5 5888888864433322211 1123333 3556776
Q ss_pred CCCCEEEEccccc
Q 019795 80 QKFEAVIHFGALK 92 (335)
Q Consensus 80 ~~~d~vi~~a~~~ 92 (335)
.+|+|||+++..
T Consensus 215 -~aDiVv~~ts~~ 226 (340)
T PRK14982 215 -EADIVVWVASMP 226 (340)
T ss_pred -cCCEEEECCcCC
Confidence 789999999874
|
|
| >PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis [] | Back alignment and domain information |
|---|
Probab=98.11 E-value=3e-05 Score=60.99 Aligned_cols=115 Identities=17% Similarity=0.226 Sum_probs=79.7
Q ss_pred CeEEEEcCCChhhHHHHHHHHhCC--CeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCC
Q 019795 5 KNILVTGGAGFIGTHCALQLLQGG--FKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKF 82 (335)
Q Consensus 5 ~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~ 82 (335)
++|.|+|++|.+|++++..|...+ .+++++++.+.........+.+..... ........ .+.+ .++ +.
T Consensus 1 ~KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~-~~~~~i~~---~~~~----~~~--~a 70 (141)
T PF00056_consen 1 MKVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPL-PSPVRITS---GDYE----ALK--DA 70 (141)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGS-TEEEEEEE---SSGG----GGT--TE
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhc-cccccccc---cccc----ccc--cc
Confidence 589999999999999999999985 689999997665555555555543211 11223332 2222 244 68
Q ss_pred CEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCC-EEEEec
Q 019795 83 EAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCK-KLVFSS 131 (335)
Q Consensus 83 d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~-~~v~~S 131 (335)
|+||-+||.... ..++-.+.++.|+.....+.+.+.+.+.+ .++.+|
T Consensus 71 Divvitag~~~~--~g~sR~~ll~~N~~i~~~~~~~i~~~~p~~~vivvt 118 (141)
T PF00056_consen 71 DIVVITAGVPRK--PGMSRLDLLEANAKIVKEIAKKIAKYAPDAIVIVVT 118 (141)
T ss_dssp SEEEETTSTSSS--TTSSHHHHHHHHHHHHHHHHHHHHHHSTTSEEEE-S
T ss_pred cEEEEecccccc--ccccHHHHHHHhHhHHHHHHHHHHHhCCccEEEEeC
Confidence 999999998532 23455678899999999999999888654 454544
|
L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C .... |
| >TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic | Back alignment and domain information |
|---|
Probab=98.08 E-value=1.2e-05 Score=73.86 Aligned_cols=106 Identities=15% Similarity=0.222 Sum_probs=71.2
Q ss_pred CCCCeEEEEcC----------------CChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEc
Q 019795 2 ASEKNILVTGG----------------AGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVG 65 (335)
Q Consensus 2 ~~~~~vlItGa----------------tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 65 (335)
+++|+|||||| ||.+|.++++.|..+|++|+++.+...... +.. ....
T Consensus 183 ~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~~--------------~~~--~~~~ 246 (390)
T TIGR00521 183 LEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSLLT--------------PPG--VKSI 246 (390)
T ss_pred cCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCccCC--------------CCC--cEEE
Confidence 46799999999 467999999999999999999876443210 122 2557
Q ss_pred cCCCHHHH-HHHHhc--CCCCEEEEcccccchhhh---hc---ChHHHHHHhHHHHHHHHHHHHHcC
Q 019795 66 DLRNKDDL-DKLFSS--QKFEAVIHFGALKAVAES---VQ---HPFRYFDNNLIGTINLYQAMAKYN 123 (335)
Q Consensus 66 Dl~d~~~~-~~~~~~--~~~d~vi~~a~~~~~~~~---~~---~~~~~~~~nv~~~~~l~~~~~~~~ 123 (335)
|+.+.+++ .++++. .++|++|++||+...... .. .....+..|+.-+-.+++.+++..
T Consensus 247 ~v~~~~~~~~~~~~~~~~~~D~~i~~Aavsd~~~~~~~~~Ki~~~~~~~~l~L~~~pdil~~l~~~~ 313 (390)
T TIGR00521 247 KVSTAEEMLEAALNELAKDFDIFISAAAVADFKPKTVFEGKIKKQGEELSLKLVKNPDIIAEVRKIK 313 (390)
T ss_pred EeccHHHHHHHHHHhhcccCCEEEEccccccccccccccccccccCCceeEEEEeCcHHHHHHHhhC
Confidence 88888887 555532 368999999998533221 11 101223456666777787777653
|
This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity. |
| >PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated | Back alignment and domain information |
|---|
Probab=98.01 E-value=9.9e-05 Score=66.76 Aligned_cols=112 Identities=23% Similarity=0.392 Sum_probs=74.3
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCC---------------------CCchhhHHhhhhhcCCccccc
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGF-KVVLIDNLH---------------------NSVPEAVDRVKDLAGPELAKK 59 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~---------------------~~~~~~~~~~~~~~~~~~~~~ 59 (335)
++.++|+|.|+ |++|+++++.|+..|. ++++++.+. ++...+.+++.++-+ .-.
T Consensus 22 L~~~~VlVvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~RQ~l~~~~dig~g~~Ka~aa~~~l~~inp---~v~ 97 (339)
T PRK07688 22 LREKHVLIIGA-GALGTANAEMLVRAGVGKVTIVDRDYVEWSNLQRQQLYTESDVKNNLPKAVAAKKRLEEINS---DVR 97 (339)
T ss_pred hcCCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCccCHHHcCccccccHHHhcCCCcHHHHHHHHHHHHCC---CcE
Confidence 35678999998 9999999999999997 789888753 122222233333221 134
Q ss_pred eeEEEccCCCHHHHHHHHhcCCCCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccCC
Q 019795 60 LEFHVGDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQ 138 (335)
Q Consensus 60 i~~~~~Dl~d~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~ 138 (335)
+..+..+++ ++.+.++++ ++|+||.+... ...-..+.++|.+.++ .+|+.++...||.
T Consensus 98 v~~~~~~~~-~~~~~~~~~--~~DlVid~~Dn-----------------~~~r~~ln~~~~~~~i-P~i~~~~~g~~G~ 155 (339)
T PRK07688 98 VEAIVQDVT-AEELEELVT--GVDLIIDATDN-----------------FETRFIVNDAAQKYGI-PWIYGACVGSYGL 155 (339)
T ss_pred EEEEeccCC-HHHHHHHHc--CCCEEEEcCCC-----------------HHHHHHHHHHHHHhCC-CEEEEeeeeeeeE
Confidence 566666765 456777787 78999986332 2222346677887774 6888887776654
|
|
| >PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional | Back alignment and domain information |
|---|
Probab=98.00 E-value=0.0001 Score=66.63 Aligned_cols=111 Identities=20% Similarity=0.349 Sum_probs=73.3
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCC---------------------CchhhHHhhhhhcCCccccc
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGF-KVVLIDNLHN---------------------SVPEAVDRVKDLAGPELAKK 59 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~---------------------~~~~~~~~~~~~~~~~~~~~ 59 (335)
++.++|+|.|+ |.+|+++++.|++.|. ++++++++.- +...+.+++.++.+ .-.
T Consensus 22 L~~~~VlIiG~-GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp---~v~ 97 (338)
T PRK12475 22 IREKHVLIVGA-GALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINS---EVE 97 (338)
T ss_pred hcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCC---CcE
Confidence 35688999997 8899999999999997 7888887641 22223334443321 245
Q ss_pred eeEEEccCCCHHHHHHHHhcCCCCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccC
Q 019795 60 LEFHVGDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYG 137 (335)
Q Consensus 60 i~~~~~Dl~d~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg 137 (335)
++.+..|++ .+.+.++++ ++|+||.+... ...-..+-+.|.+.++ .+|+.+..+.+|
T Consensus 98 i~~~~~~~~-~~~~~~~~~--~~DlVid~~D~-----------------~~~r~~in~~~~~~~i-p~i~~~~~g~~G 154 (338)
T PRK12475 98 IVPVVTDVT-VEELEELVK--EVDLIIDATDN-----------------FDTRLLINDLSQKYNI-PWIYGGCVGSYG 154 (338)
T ss_pred EEEEeccCC-HHHHHHHhc--CCCEEEEcCCC-----------------HHHHHHHHHHHHHcCC-CEEEEEecccEE
Confidence 666777775 456778887 78999986432 1112235566777774 677777666554
|
|
| >KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.90 E-value=0.0017 Score=51.03 Aligned_cols=150 Identities=16% Similarity=0.164 Sum_probs=92.0
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCC---H----HHHHH
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRN---K----DDLDK 75 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d---~----~~~~~ 75 (335)
+..+|+|-|+-|-+|+++++.+.+++|-|.-++...+...+ .-.++..|-+- + +++.+
T Consensus 2 sagrVivYGGkGALGSacv~~FkannywV~siDl~eNe~Ad---------------~sI~V~~~~swtEQe~~v~~~vg~ 66 (236)
T KOG4022|consen 2 SAGRVIVYGGKGALGSACVEFFKANNYWVLSIDLSENEQAD---------------SSILVDGNKSWTEQEQSVLEQVGS 66 (236)
T ss_pred CCceEEEEcCcchHhHHHHHHHHhcCeEEEEEeeccccccc---------------ceEEecCCcchhHHHHHHHHHHHH
Confidence 45689999999999999999999999999988876554321 11233333221 2 23444
Q ss_pred HHhcCCCCEEEEcccccc-----hhhhhcChHHHHHHhHHHHHHHHHHHHHc-CCCEEEEecccc-ccCCCCCCCccCCC
Q 019795 76 LFSSQKFEAVIHFGALKA-----VAESVQHPFRYFDNNLIGTINLYQAMAKY-NCKKLVFSSSAT-IYGQPEKIPCVEDF 148 (335)
Q Consensus 76 ~~~~~~~d~vi~~a~~~~-----~~~~~~~~~~~~~~nv~~~~~l~~~~~~~-~~~~~v~~Ss~~-vyg~~~~~~~~e~~ 148 (335)
.+...++|.||..||-.. .+.-..+.+.+++..|.....-...+..+ +..-++.+..+. .. .
T Consensus 67 sL~gekvDav~CVAGGWAGGnAksKdl~KNaDLMwKQSvwtSaIsa~lAt~HLK~GGLL~LtGAkaAl-----------~ 135 (236)
T KOG4022|consen 67 SLQGEKVDAVFCVAGGWAGGNAKSKDLVKNADLMWKQSVWTSAISAKLATTHLKPGGLLQLTGAKAAL-----------G 135 (236)
T ss_pred hhcccccceEEEeeccccCCCcchhhhhhchhhHHHHHHHHHHHHHHHHHhccCCCceeeeccccccc-----------C
Confidence 555578999998776422 12223455556665555433222223222 333455444322 22 1
Q ss_pred CCCCCChhHHhHHHHHHHHHHHHhhCCCCe
Q 019795 149 PYGAMNPYGRTKQWCEEIAFDVQKADPEWR 178 (335)
Q Consensus 149 ~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ 178 (335)
+.+..-.||..|.+..++.+.++.+..+++
T Consensus 136 gTPgMIGYGMAKaAVHqLt~SLaak~SGlP 165 (236)
T KOG4022|consen 136 GTPGMIGYGMAKAAVHQLTSSLAAKDSGLP 165 (236)
T ss_pred CCCcccchhHHHHHHHHHHHHhcccccCCC
Confidence 334455799999999999999887765553
|
|
| >PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=97.88 E-value=8.9e-05 Score=70.21 Aligned_cols=76 Identities=22% Similarity=0.330 Sum_probs=54.7
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCC-chhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcC
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNS-VPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQ 80 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~ 80 (335)
+++|+|+|+|+++ +|..+++.|++.|++|+++++.... .....+++.+ .++.++.+|..+ +...
T Consensus 3 ~~~k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~~-------~~~~~~~~~~~~-----~~~~-- 67 (450)
T PRK14106 3 LKGKKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKEEDQLKEALEELGE-------LGIELVLGEYPE-----EFLE-- 67 (450)
T ss_pred cCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHh-------cCCEEEeCCcch-----hHhh--
Confidence 4679999999866 9999999999999999999886422 1111222221 256677778765 2333
Q ss_pred CCCEEEEccccc
Q 019795 81 KFEAVIHFGALK 92 (335)
Q Consensus 81 ~~d~vi~~a~~~ 92 (335)
++|+||++++..
T Consensus 68 ~~d~vv~~~g~~ 79 (450)
T PRK14106 68 GVDLVVVSPGVP 79 (450)
T ss_pred cCCEEEECCCCC
Confidence 689999998874
|
|
| >COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.78 E-value=0.00023 Score=60.67 Aligned_cols=75 Identities=28% Similarity=0.414 Sum_probs=58.1
Q ss_pred CeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHH-HhcCCCC
Q 019795 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKL-FSSQKFE 83 (335)
Q Consensus 5 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~-~~~~~~d 83 (335)
|+++|.|+ |-+|+.+++.|.++|++|+++++++........ . .-....+.+|-+|++.++++ ++ .+|
T Consensus 1 m~iiIiG~-G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~---~------~~~~~~v~gd~t~~~~L~~agi~--~aD 68 (225)
T COG0569 1 MKIIIIGA-GRVGRSVARELSEEGHNVVLIDRDEERVEEFLA---D------ELDTHVVIGDATDEDVLEEAGID--DAD 68 (225)
T ss_pred CEEEEECC-cHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhh---h------hcceEEEEecCCCHHHHHhcCCC--cCC
Confidence 57899997 999999999999999999999986554332111 0 03567899999999988887 55 789
Q ss_pred EEEEcccc
Q 019795 84 AVIHFGAL 91 (335)
Q Consensus 84 ~vi~~a~~ 91 (335)
+++-+.+.
T Consensus 69 ~vva~t~~ 76 (225)
T COG0569 69 AVVAATGN 76 (225)
T ss_pred EEEEeeCC
Confidence 99865443
|
|
| >TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E | Back alignment and domain information |
|---|
Probab=97.78 E-value=0.0004 Score=58.21 Aligned_cols=112 Identities=20% Similarity=0.313 Sum_probs=70.9
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCC-------------------CchhhHHhhhhhcCCcccccee
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGF-KVVLIDNLHN-------------------SVPEAVDRVKDLAGPELAKKLE 61 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~-------------------~~~~~~~~~~~~~~~~~~~~i~ 61 (335)
++.++|+|.|+ |.+|+++++.|+..|. ++++++.+.- +.....+++.++-+ .-.++
T Consensus 19 l~~~~VlviG~-GglGs~ia~~La~~Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np---~v~i~ 94 (202)
T TIGR02356 19 LLNSHVLIIGA-GGLGSPAALYLAGAGVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELNS---DIQVT 94 (202)
T ss_pred hcCCCEEEECC-CHHHHHHHHHHHHcCCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhCC---CCEEE
Confidence 35678999996 9999999999999996 7888887632 22222233333211 12344
Q ss_pred EEEccCCCHHHHHHHHhcCCCCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccCC
Q 019795 62 FHVGDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQ 138 (335)
Q Consensus 62 ~~~~Dl~d~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~ 138 (335)
.+...+. ++.+.++++ ++|+||.+... ...-..+.+.|++.+. .+|+.++.+.+|.
T Consensus 95 ~~~~~i~-~~~~~~~~~--~~D~Vi~~~d~-----------------~~~r~~l~~~~~~~~i-p~i~~~~~g~~G~ 150 (202)
T TIGR02356 95 ALKERVT-AENLELLIN--NVDLVLDCTDN-----------------FATRYLINDACVALGT-PLISAAVVGFGGQ 150 (202)
T ss_pred EehhcCC-HHHHHHHHh--CCCEEEECCCC-----------------HHHHHHHHHHHHHcCC-CEEEEEeccCeEE
Confidence 4444443 456777887 78999986432 1122236667777774 6888777665543
|
coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli. |
| >PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase | Back alignment and domain information |
|---|
Probab=97.73 E-value=0.00016 Score=73.74 Aligned_cols=77 Identities=19% Similarity=0.201 Sum_probs=57.7
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhC-CCe-------------EEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCC
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQG-GFK-------------VVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLR 68 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~-g~~-------------V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~ 68 (335)
+||+|+|.|+ |++|+..++.|++. +++ |.+.+++...... +.+.. +++..+..|+.
T Consensus 568 ~~~rIlVLGA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~----la~~~-----~~~~~v~lDv~ 637 (1042)
T PLN02819 568 KSQNVLILGA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKE----TVEGI-----ENAEAVQLDVS 637 (1042)
T ss_pred cCCcEEEECC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHH----HHHhc-----CCCceEEeecC
Confidence 4789999998 99999999999875 333 6666665433222 22111 35678999999
Q ss_pred CHHHHHHHHhcCCCCEEEEcccc
Q 019795 69 NKDDLDKLFSSQKFEAVIHFGAL 91 (335)
Q Consensus 69 d~~~~~~~~~~~~~d~vi~~a~~ 91 (335)
|.+++.++++ .+|+||.+...
T Consensus 638 D~e~L~~~v~--~~DaVIsalP~ 658 (1042)
T PLN02819 638 DSESLLKYVS--QVDVVISLLPA 658 (1042)
T ss_pred CHHHHHHhhc--CCCEEEECCCc
Confidence 9999999988 69999998765
|
|
| >PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism | Back alignment and domain information |
|---|
Probab=97.69 E-value=0.00019 Score=58.97 Aligned_cols=76 Identities=20% Similarity=0.296 Sum_probs=46.1
Q ss_pred CCCCeEEEEcC----------------CChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEc
Q 019795 2 ASEKNILVTGG----------------AGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVG 65 (335)
Q Consensus 2 ~~~~~vlItGa----------------tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 65 (335)
+++|+||||+| ||-+|.+|++.+..+|++|+.+.... ... .+..+..+.+
T Consensus 1 l~gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~Ga~V~li~g~~-~~~-------------~p~~~~~i~v 66 (185)
T PF04127_consen 1 LKGKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRGAEVTLIHGPS-SLP-------------PPPGVKVIRV 66 (185)
T ss_dssp -TT-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT-EEEEEE-TT-S-----------------TTEEEEE-
T ss_pred CCCCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCCCEEEEEecCc-ccc-------------ccccceEEEe
Confidence 46899999975 68999999999999999999997642 111 0145666654
Q ss_pred cCCCHHHHHHHHhc--CCCCEEEEcccccc
Q 019795 66 DLRNKDDLDKLFSS--QKFEAVIHFGALKA 93 (335)
Q Consensus 66 Dl~d~~~~~~~~~~--~~~d~vi~~a~~~~ 93 (335)
. ..+++.+.+.. ...|++||+|++..
T Consensus 67 ~--sa~em~~~~~~~~~~~Di~I~aAAVsD 94 (185)
T PF04127_consen 67 E--SAEEMLEAVKELLPSADIIIMAAAVSD 94 (185)
T ss_dssp S--SHHHHHHHHHHHGGGGSEEEE-SB--S
T ss_pred c--chhhhhhhhccccCcceeEEEecchhh
Confidence 3 44443333332 15699999999853
|
These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A. |
| >COG3268 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=97.68 E-value=0.00012 Score=64.10 Aligned_cols=78 Identities=18% Similarity=0.214 Sum_probs=59.2
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCC
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKF 82 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~ 82 (335)
+...++|-|||||.|.-++++|.++|....+.+|+..+.......|. ++. -..++-+++.+++.++ +.
T Consensus 5 ~e~d~iiYGAtGy~G~lvae~l~~~g~~~aLAgRs~~kl~~l~~~LG--------~~~--~~~p~~~p~~~~~~~~--~~ 72 (382)
T COG3268 5 REYDIIIYGATGYAGGLVAEYLAREGLTAALAGRSSAKLDALRASLG--------PEA--AVFPLGVPAALEAMAS--RT 72 (382)
T ss_pred cceeEEEEccccchhHHHHHHHHHcCCchhhccCCHHHHHHHHHhcC--------ccc--cccCCCCHHHHHHHHh--cc
Confidence 34569999999999999999999999888878887665544443332 233 3334445888999998 88
Q ss_pred CEEEEccccc
Q 019795 83 EAVIHFGALK 92 (335)
Q Consensus 83 d~vi~~a~~~ 92 (335)
++|+||+|+.
T Consensus 73 ~VVlncvGPy 82 (382)
T COG3268 73 QVVLNCVGPY 82 (382)
T ss_pred eEEEeccccc
Confidence 9999999973
|
|
| >cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=97.68 E-value=0.00089 Score=59.97 Aligned_cols=115 Identities=12% Similarity=0.184 Sum_probs=79.7
Q ss_pred CeEEEEcCCChhhHHHHHHHHhCC--CeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCC
Q 019795 5 KNILVTGGAGFIGTHCALQLLQGG--FKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKF 82 (335)
Q Consensus 5 ~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~ 82 (335)
++|.|.|+ |.+|+.++..|+..| ++++++++++.........+.+..... ........ .+.+ . +. +.
T Consensus 1 ~kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~-~~~~~i~~---~~~~---~-l~--~a 69 (306)
T cd05291 1 RKVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFL-PSPVKIKA---GDYS---D-CK--DA 69 (306)
T ss_pred CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhcc-CCCeEEEc---CCHH---H-hC--CC
Confidence 47999996 999999999999998 689999998877666666665443211 11222221 2222 2 34 78
Q ss_pred CEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCC-EEEEecc
Q 019795 83 EAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCK-KLVFSSS 132 (335)
Q Consensus 83 d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~-~~v~~Ss 132 (335)
|+||++++.+.. ..++-...++.|+.....+.+.+++.+.+ .++.+|.
T Consensus 70 DIVIitag~~~~--~g~~R~dll~~N~~i~~~~~~~i~~~~~~~~vivvsN 118 (306)
T cd05291 70 DIVVITAGAPQK--PGETRLDLLEKNAKIMKSIVPKIKASGFDGIFLVASN 118 (306)
T ss_pred CEEEEccCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecC
Confidence 999999998532 23344578889999999999999887644 4555554
|
L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine |
| >PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases | Back alignment and domain information |
|---|
Probab=97.64 E-value=0.00011 Score=57.26 Aligned_cols=76 Identities=18% Similarity=0.222 Sum_probs=53.2
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCe-EEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcC
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFK-VVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQ 80 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~ 80 (335)
+++++++|.|+ |.+|+.++..|.+.|+. |++++|+..+.....+.+.. ..+.++..+ ++.+.+.
T Consensus 10 l~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~-------~~~~~~~~~-----~~~~~~~-- 74 (135)
T PF01488_consen 10 LKGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGG-------VNIEAIPLE-----DLEEALQ-- 74 (135)
T ss_dssp GTTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTG-------CSEEEEEGG-----GHCHHHH--
T ss_pred cCCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCc-------cccceeeHH-----HHHHHHh--
Confidence 46799999998 99999999999999977 99999975554444433310 234444432 3445666
Q ss_pred CCCEEEEccccc
Q 019795 81 KFEAVIHFGALK 92 (335)
Q Consensus 81 ~~d~vi~~a~~~ 92 (335)
.+|+||++.+..
T Consensus 75 ~~DivI~aT~~~ 86 (135)
T PF01488_consen 75 EADIVINATPSG 86 (135)
T ss_dssp TESEEEE-SSTT
T ss_pred hCCeEEEecCCC
Confidence 789999987664
|
Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C .... |
| >TIGR01759 MalateDH-SF1 malate dehydrogenase | Back alignment and domain information |
|---|
Probab=97.64 E-value=0.00079 Score=60.46 Aligned_cols=169 Identities=16% Similarity=0.118 Sum_probs=98.9
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhCCC-------eEEEEecCC--CCchhhHHhhhhhcCCccccceeEEEccCCCHHHHH
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQGGF-------KVVLIDNLH--NSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLD 74 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~g~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~ 74 (335)
.-+|.|+|++|++|++++..|...|. ++++++..+ .......-.+.+...+.. ..+.+ .. .+.
T Consensus 3 p~KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~-~~~~i-~~-----~~~- 74 (323)
T TIGR01759 3 PVRVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAMKALEGVAMELEDCAFPLL-AGVVA-TT-----DPE- 74 (323)
T ss_pred CeEEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCcccccchHHHHHhhcccccc-CCcEE-ec-----ChH-
Confidence 35899999999999999999998873 799999865 224444444544331111 12211 11 122
Q ss_pred HHHhcCCCCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCC-C-EEEEecccc-c--cCCCCCCCccCCC-
Q 019795 75 KLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNC-K-KLVFSSSAT-I--YGQPEKIPCVEDF- 148 (335)
Q Consensus 75 ~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~-~-~~v~~Ss~~-v--yg~~~~~~~~e~~- 148 (335)
+.++ +.|+||.+||...- ..++-...+..|+.....+.+.+.+... + .++.+|.-. + |- ..+.+
T Consensus 75 ~~~~--daDvVVitAG~~~k--~g~tR~dll~~Na~i~~~i~~~i~~~~~~~~iiivvsNPvDv~t~v------~~k~s~ 144 (323)
T TIGR01759 75 EAFK--DVDAALLVGAFPRK--PGMERADLLSKNGKIFKEQGKALNKVAKKDVKVLVVGNPANTNALI------ASKNAP 144 (323)
T ss_pred HHhC--CCCEEEEeCCCCCC--CCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeCCcHHHHHHH------HHHHcC
Confidence 3344 68999999998532 2345568899999999999999988864 4 444555311 0 10 00111
Q ss_pred CCCCCChhHHhHHHHHHHHHHHHhhCCCCeEEEEecccccCCC
Q 019795 149 PYGAMNPYGRTKQWCEEIAFDVQKADPEWRIILLRYFNPVGAH 191 (335)
Q Consensus 149 ~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~lR~~~v~G~~ 191 (335)
..++....|.+.+..-++-...++.. +.+...++-..|+|.|
T Consensus 145 g~p~~rViG~t~LDs~R~r~~la~~l-~v~~~~V~~~~V~GeH 186 (323)
T TIGR01759 145 DIPPKNFSAMTRLDHNRAKYQLAAKA-GVPVSDVKNVIIWGNH 186 (323)
T ss_pred CCCHHHEEEeeHHHHHHHHHHHHHHh-CcChHHeEEeEEEecC
Confidence 12222223334444334433344444 6665666555677876
|
This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms. |
| >cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity | Back alignment and domain information |
|---|
Probab=97.64 E-value=0.00041 Score=62.10 Aligned_cols=117 Identities=15% Similarity=0.167 Sum_probs=72.7
Q ss_pred CeEEEEcCCChhhHHHHHHHHhCCC--eEEEEecCC--CCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcC
Q 019795 5 KNILVTGGAGFIGTHCALQLLQGGF--KVVLIDNLH--NSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQ 80 (335)
Q Consensus 5 ~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~ 80 (335)
|+|.|+|+||.+|..++..|+..|. +|+++++.+ .........+.+.... .+.... ...+ .+... +.
T Consensus 1 ~kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~~~~~l~~~~~dl~d~~~~-~~~~~~---i~~~--~d~~~-l~-- 71 (309)
T cd05294 1 MKVSIIGASGRVGSATALLLAKEDVVKEINLISRPKSLEKLKGLRLDIYDALAA-AGIDAE---IKIS--SDLSD-VA-- 71 (309)
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcccccccccccchhhhchhc-cCCCcE---EEEC--CCHHH-hC--
Confidence 5899999999999999999999885 499999843 2222222122111000 001111 1111 11333 55
Q ss_pred CCCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCC-EEEEecc
Q 019795 81 KFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCK-KLVFSSS 132 (335)
Q Consensus 81 ~~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~-~~v~~Ss 132 (335)
+.|+||-+++.+.. ..++-...++.|+.-...+++.+.+...+ .+|.+++
T Consensus 72 ~aDiViitag~p~~--~~~~r~dl~~~n~~i~~~~~~~i~~~~~~~~viv~~n 122 (309)
T cd05294 72 GSDIVIITAGVPRK--EGMSRLDLAKKNAKIVKKYAKQIAEFAPDTKILVVTN 122 (309)
T ss_pred CCCEEEEecCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCC
Confidence 78999999997532 12233577888999999999988776433 5556665
|
The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox |
| >PRK00066 ldh L-lactate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.63 E-value=0.001 Score=59.67 Aligned_cols=115 Identities=11% Similarity=0.162 Sum_probs=80.9
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhCCC--eEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCC
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQGGF--KVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQK 81 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~ 81 (335)
.++|.|+|+ |.+|+.++..|+..|. ++++++++........-.+.+..... ..+.... .+ ..+ ++ +
T Consensus 6 ~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~--~~~~i~~---~~---~~~-~~--~ 73 (315)
T PRK00066 6 HNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFT--SPTKIYA---GD---YSD-CK--D 73 (315)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhcccc--CCeEEEe---CC---HHH-hC--C
Confidence 368999998 9999999999999885 79999998777666666666543211 1233322 12 333 44 7
Q ss_pred CCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCC-EEEEecc
Q 019795 82 FEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCK-KLVFSSS 132 (335)
Q Consensus 82 ~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~-~~v~~Ss 132 (335)
.|+||-+||.+.. ..++-...+..|+.....+++.+++.+.+ .++.+|.
T Consensus 74 adivIitag~~~k--~g~~R~dll~~N~~i~~~i~~~i~~~~~~~~vivvsN 123 (315)
T PRK00066 74 ADLVVITAGAPQK--PGETRLDLVEKNLKIFKSIVGEVMASGFDGIFLVASN 123 (315)
T ss_pred CCEEEEecCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccC
Confidence 8999999998532 23344578889999999999999887654 4555553
|
|
| >PRK05442 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.61 E-value=0.00075 Score=60.69 Aligned_cols=172 Identities=16% Similarity=0.108 Sum_probs=99.3
Q ss_pred CCCCCeEEEEcCCChhhHHHHHHHHhCCC-------eEEEEecCCC--CchhhHHhhhhhcCCccccceeEEEccCCCHH
Q 019795 1 MASEKNILVTGGAGFIGTHCALQLLQGGF-------KVVLIDNLHN--SVPEAVDRVKDLAGPELAKKLEFHVGDLRNKD 71 (335)
Q Consensus 1 ~~~~~~vlItGatG~iG~~l~~~L~~~g~-------~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~ 71 (335)
|..+++|.|+|++|.+|+.++..|+..|. ++++++..+. ......-.+.+...+.. ..+.+. . .
T Consensus 1 ~~~~~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~~~~~g~a~Dl~~~~~~~~-~~~~i~-~-----~ 73 (326)
T PRK05442 1 MKAPVRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPALKALEGVVMELDDCAFPLL-AGVVIT-D-----D 73 (326)
T ss_pred CCCCcEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCcccccceeehhhhhhhhhhc-CCcEEe-c-----C
Confidence 67788999999999999999999987652 7899988543 23333334443321111 122211 1 1
Q ss_pred HHHHHHhcCCCCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcC--CCEEEEecccc-c--cCCCCCCCccC
Q 019795 72 DLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYN--CKKLVFSSSAT-I--YGQPEKIPCVE 146 (335)
Q Consensus 72 ~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~--~~~~v~~Ss~~-v--yg~~~~~~~~e 146 (335)
+. +.++ +.|+||-+||...- ..++-.+.+..|+.....+.+.+.+.. ...++.+|.-. + |- ..+
T Consensus 74 ~y-~~~~--daDiVVitaG~~~k--~g~tR~dll~~Na~i~~~i~~~i~~~~~~~~iiivvsNPvDv~t~v------~~k 142 (326)
T PRK05442 74 PN-VAFK--DADVALLVGARPRG--PGMERKDLLEANGAIFTAQGKALNEVAARDVKVLVVGNPANTNALI------AMK 142 (326)
T ss_pred hH-HHhC--CCCEEEEeCCCCCC--CCCcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCCchHHHHHH------HHH
Confidence 12 3344 78999999997432 234556789999999999999998843 33566666411 1 10 000
Q ss_pred CC-CCCCCChhHHhHHHHHHHHHHHHhhCCCCeEEEEecccccCCC
Q 019795 147 DF-PYGAMNPYGRTKQWCEEIAFDVQKADPEWRIILLRYFNPVGAH 191 (335)
Q Consensus 147 ~~-~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~lR~~~v~G~~ 191 (335)
.+ ..++....|.+-+..-++-...++.. +++...++...|+|.|
T Consensus 143 ~s~g~p~~rViG~t~LDs~R~r~~la~~l-~v~~~~V~~~vV~GeH 187 (326)
T PRK05442 143 NAPDLPAENFTAMTRLDHNRALSQLAAKA-GVPVADIKKMTVWGNH 187 (326)
T ss_pred HcCCCCHHHEEeeeHHHHHHHHHHHHHHh-CcChHHeEEeEEEECC
Confidence 11 11111223333333334444444444 6665656555567876
|
|
| >cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA | Back alignment and domain information |
|---|
Probab=97.60 E-value=0.0011 Score=56.69 Aligned_cols=110 Identities=20% Similarity=0.269 Sum_probs=68.9
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCC-------------------CCchhhHHhhhhhcCCccccceeE
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGF-KVVLIDNLH-------------------NSVPEAVDRVKDLAGPELAKKLEF 62 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~-------------------~~~~~~~~~~~~~~~~~~~~~i~~ 62 (335)
++++|+|.|+ |.+|+++++.|+..|. +++++|... .+.....+++.++-+ ..++..
T Consensus 20 ~~~~VlivG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np---~~~i~~ 95 (228)
T cd00757 20 KNARVLVVGA-GGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINP---DVEIEA 95 (228)
T ss_pred hCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCC---CCEEEE
Confidence 5678999996 9999999999999995 566664332 122222333333221 134555
Q ss_pred EEccCCCHHHHHHHHhcCCCCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccC
Q 019795 63 HVGDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYG 137 (335)
Q Consensus 63 ~~~Dl~d~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg 137 (335)
+..++ +.+.+.++++ ++|+||.+.... ..-..+-+.|.+.++ .+|+.+....+|
T Consensus 96 ~~~~i-~~~~~~~~~~--~~DvVi~~~d~~-----------------~~r~~l~~~~~~~~i-p~i~~g~~g~~g 149 (228)
T cd00757 96 YNERL-DAENAEELIA--GYDLVLDCTDNF-----------------ATRYLINDACVKLGK-PLVSGAVLGFEG 149 (228)
T ss_pred eccee-CHHHHHHHHh--CCCEEEEcCCCH-----------------HHHHHHHHHHHHcCC-CEEEEEeccCEE
Confidence 65555 3456777887 789999875532 112246667777774 677777655544
|
Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1). |
| >PTZ00082 L-lactate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.54 E-value=0.001 Score=59.86 Aligned_cols=122 Identities=16% Similarity=0.101 Sum_probs=77.4
Q ss_pred CCCCCeEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc
Q 019795 1 MASEKNILVTGGAGFIGTHCALQLLQGGF-KVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS 79 (335)
Q Consensus 1 ~~~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~ 79 (335)
|.++++|.|+|+ |.+|+.++..|+..|. +++++++++.......-++.+... .......+... .| ++ .++
T Consensus 3 ~~~~~KI~IIGa-G~vG~~ia~~la~~gl~~i~LvDi~~~~~~~~~ld~~~~~~-~~~~~~~I~~~--~d---~~-~l~- 73 (321)
T PTZ00082 3 MIKRRKISLIGS-GNIGGVMAYLIVLKNLGDVVLFDIVKNIPQGKALDISHSNV-IAGSNSKVIGT--NN---YE-DIA- 73 (321)
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCCchhhHHHHHHHhhhh-ccCCCeEEEEC--CC---HH-HhC-
Confidence 566789999996 9999999999999884 899999987654322222222111 00111222210 12 32 345
Q ss_pred CCCCEEEEcccccchhhh---hcChHHHHHHhHHHHHHHHHHHHHcCCC-EEEEecc
Q 019795 80 QKFEAVIHFGALKAVAES---VQHPFRYFDNNLIGTINLYQAMAKYNCK-KLVFSSS 132 (335)
Q Consensus 80 ~~~d~vi~~a~~~~~~~~---~~~~~~~~~~nv~~~~~l~~~~~~~~~~-~~v~~Ss 132 (335)
+.|+||.+++....... ..+-.+.+..|+.....+++.+.+...+ .++.+|.
T Consensus 74 -~aDiVI~tag~~~~~~~~~~~~~r~~~l~~n~~i~~~i~~~i~~~~p~a~~iv~sN 129 (321)
T PTZ00082 74 -GSDVVIVTAGLTKRPGKSDKEWNRDDLLPLNAKIMDEVAEGIKKYCPNAFVIVITN 129 (321)
T ss_pred -CCCEEEECCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 78999999987532111 0134567778988888888888887654 5666665
|
|
| >PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase | Back alignment and domain information |
|---|
Probab=97.52 E-value=0.00041 Score=63.74 Aligned_cols=101 Identities=20% Similarity=0.202 Sum_probs=61.6
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhC-CCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHH-HhcC
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQG-GFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKL-FSSQ 80 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~-~~~~ 80 (335)
++|+|.|.||||++|..|++.|.+. +.+++.+.+........... .......|+.+..+++.. ++
T Consensus 37 ~~~kVaIvGATG~vG~eLlrlL~~hP~~el~~l~s~~saG~~i~~~-----------~~~l~~~~~~~~~~~~~~~~~-- 103 (381)
T PLN02968 37 EKKRIFVLGASGYTGAEVRRLLANHPDFEITVMTADRKAGQSFGSV-----------FPHLITQDLPNLVAVKDADFS-- 103 (381)
T ss_pred cccEEEEECCCChHHHHHHHHHHhCCCCeEEEEEChhhcCCCchhh-----------CccccCccccceecCCHHHhc--
Confidence 4579999999999999999999988 67888887743332111110 111122333322222221 44
Q ss_pred CCCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEecccccc
Q 019795 81 KFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIY 136 (335)
Q Consensus 81 ~~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vy 136 (335)
++|+||-+.+.. .+..++.++ +.+ .++|-.|+...+
T Consensus 104 ~~DvVf~Alp~~------------------~s~~i~~~~-~~g-~~VIDlSs~fRl 139 (381)
T PLN02968 104 DVDAVFCCLPHG------------------TTQEIIKAL-PKD-LKIVDLSADFRL 139 (381)
T ss_pred CCCEEEEcCCHH------------------HHHHHHHHH-hCC-CEEEEcCchhcc
Confidence 689999765431 233455555 344 589999998765
|
|
| >PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP | Back alignment and domain information |
|---|
Probab=97.51 E-value=0.0016 Score=50.79 Aligned_cols=109 Identities=20% Similarity=0.399 Sum_probs=70.3
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCCc-------------------hhhHHhhhhhcCCccccceeEE
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQGGF-KVVLIDNLHNSV-------------------PEAVDRVKDLAGPELAKKLEFH 63 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~-------------------~~~~~~~~~~~~~~~~~~i~~~ 63 (335)
.++|+|.|+ |.+|+.+++.|+..|. +++++|...-+. ....+.+.++.+ ..++..+
T Consensus 2 ~~~v~iiG~-G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np---~~~v~~~ 77 (135)
T PF00899_consen 2 NKRVLIIGA-GGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINP---DVEVEAI 77 (135)
T ss_dssp T-EEEEEST-SHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHST---TSEEEEE
T ss_pred CCEEEEECc-CHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcC---ceeeeee
Confidence 579999997 9999999999999996 577776543221 111222222211 2456666
Q ss_pred EccCCCHHHHHHHHhcCCCCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccC
Q 019795 64 VGDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYG 137 (335)
Q Consensus 64 ~~Dl~d~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg 137 (335)
..++ +++...++++ .+|+||.+... ...-..+.+.|++.+. .+|+.++.+.+|
T Consensus 78 ~~~~-~~~~~~~~~~--~~d~vi~~~d~-----------------~~~~~~l~~~~~~~~~-p~i~~~~~g~~G 130 (135)
T PF00899_consen 78 PEKI-DEENIEELLK--DYDIVIDCVDS-----------------LAARLLLNEICREYGI-PFIDAGVNGFYG 130 (135)
T ss_dssp ESHC-SHHHHHHHHH--TSSEEEEESSS-----------------HHHHHHHHHHHHHTT--EEEEEEEETTEE
T ss_pred eccc-cccccccccc--CCCEEEEecCC-----------------HHHHHHHHHHHHHcCC-CEEEEEeecCEE
Confidence 6677 5566788887 78999986443 1122246667888874 788877766554
|
Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A .... |
| >cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases | Back alignment and domain information |
|---|
Probab=97.51 E-value=0.0014 Score=58.39 Aligned_cols=115 Identities=19% Similarity=0.141 Sum_probs=76.3
Q ss_pred CeEEEEcCCChhhHHHHHHHHhCC--CeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCC
Q 019795 5 KNILVTGGAGFIGTHCALQLLQGG--FKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKF 82 (335)
Q Consensus 5 ~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~ 82 (335)
|+|.|+|++|.+|++++..|+..| .++++++.+ ......-.+.+.. ....+.... ..+++.+.++ +.
T Consensus 1 ~KI~IIGaaG~VG~~~a~~l~~~~~~~elvLiDi~--~a~g~alDL~~~~-----~~~~i~~~~--~~~~~y~~~~--da 69 (310)
T cd01337 1 VKVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIV--NTPGVAADLSHIN-----TPAKVTGYL--GPEELKKALK--GA 69 (310)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEecC--ccceeehHhHhCC-----CcceEEEec--CCCchHHhcC--CC
Confidence 489999999999999999998887 579999886 3222223333321 111121110 1112334455 78
Q ss_pred CEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCC-EEEEecc
Q 019795 83 EAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCK-KLVFSSS 132 (335)
Q Consensus 83 d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~-~~v~~Ss 132 (335)
|+||-+||.+.. ..+.-...++.|+.....+.+..++.+.+ .++.+|.
T Consensus 70 DivvitaG~~~k--~g~tR~dll~~N~~i~~~i~~~i~~~~p~a~vivvtN 118 (310)
T cd01337 70 DVVVIPAGVPRK--PGMTRDDLFNINAGIVRDLATAVAKACPKALILIISN 118 (310)
T ss_pred CEEEEeCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccC
Confidence 999999998532 23455578999999999999999888654 4555554
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >cd05290 LDH_3 A subgroup of L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=97.49 E-value=0.0035 Score=55.95 Aligned_cols=115 Identities=12% Similarity=0.147 Sum_probs=78.6
Q ss_pred eEEEEcCCChhhHHHHHHHHhCC--CeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCCC
Q 019795 6 NILVTGGAGFIGTHCALQLLQGG--FKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKFE 83 (335)
Q Consensus 6 ~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~d 83 (335)
+|.|.|+ |.+|+.++..|+.++ -++++++..+.........+.+.........+.+...| . +.++ +.|
T Consensus 1 Ki~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~a~g~a~DL~~~~~~~~~~~~~i~~~~------y-~~~~--~aD 70 (307)
T cd05290 1 KLVVIGA-GHVGSAVLNYALALGLFSEIVLIDVNEGVAEGEALDFHHATALTYSTNTKIRAGD------Y-DDCA--DAD 70 (307)
T ss_pred CEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHHHHHHHhhhccCCCCCEEEEECC------H-HHhC--CCC
Confidence 5789998 999999999999887 47999999777666666666653321111233444333 2 2344 789
Q ss_pred EEEEcccccchhhhhcC--hHHHHHHhHHHHHHHHHHHHHcCCCE-EEEecc
Q 019795 84 AVIHFGALKAVAESVQH--PFRYFDNNLIGTINLYQAMAKYNCKK-LVFSSS 132 (335)
Q Consensus 84 ~vi~~a~~~~~~~~~~~--~~~~~~~nv~~~~~l~~~~~~~~~~~-~v~~Ss 132 (335)
+||-+||...-. .+. -...+..|+.....+.+.+.+.+... ++.+|.
T Consensus 71 ivvitaG~~~kp--g~tr~R~dll~~N~~I~~~i~~~i~~~~p~~i~ivvsN 120 (307)
T cd05290 71 IIVITAGPSIDP--GNTDDRLDLAQTNAKIIREIMGNITKVTKEAVIILITN 120 (307)
T ss_pred EEEECCCCCCCC--CCCchHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecC
Confidence 999999985321 122 25788899999999999999887544 444443
|
L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PTZ00117 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.47 E-value=0.0014 Score=58.95 Aligned_cols=118 Identities=17% Similarity=0.213 Sum_probs=76.9
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCC-CeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCC
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGG-FKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQK 81 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~ 81 (335)
+.++|.|+|| |.+|+.++..|+..| .+++++++++.......-.+.+... .......+ .+ ..+++ .+. +
T Consensus 4 ~~~KI~IIGa-G~vG~~ia~~l~~~~~~~l~L~Di~~~~~~g~~lDl~~~~~-~~~~~~~i-~~----~~d~~-~l~--~ 73 (319)
T PTZ00117 4 KRKKISMIGA-GQIGSTVALLILQKNLGDVVLYDVIKGVPQGKALDLKHFST-LVGSNINI-LG----TNNYE-DIK--D 73 (319)
T ss_pred CCcEEEEECC-CHHHHHHHHHHHHCCCCeEEEEECCCccchhHHHHHhhhcc-ccCCCeEE-Ee----CCCHH-HhC--C
Confidence 5679999998 999999999999888 7899999977654332222322211 01011111 11 12344 445 7
Q ss_pred CCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCE-EEEecc
Q 019795 82 FEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKK-LVFSSS 132 (335)
Q Consensus 82 ~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~-~v~~Ss 132 (335)
.|+||.+++.... ..+.-...+..|......+++.+.+...+. ++++|.
T Consensus 74 ADiVVitag~~~~--~g~~r~dll~~n~~i~~~i~~~i~~~~p~a~vivvsN 123 (319)
T PTZ00117 74 SDVVVITAGVQRK--EEMTREDLLTINGKIMKSVAESVKKYCPNAFVICVTN 123 (319)
T ss_pred CCEEEECCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 8999999987432 233445778889988888999888876544 566554
|
|
| >PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate | Back alignment and domain information |
|---|
Probab=97.44 E-value=0.0063 Score=46.40 Aligned_cols=98 Identities=17% Similarity=0.228 Sum_probs=54.2
Q ss_pred eEEEEcCCChhhHHHHHHHHhC-CCeEEEEecCCC-CchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCCC
Q 019795 6 NILVTGGAGFIGTHCALQLLQG-GFKVVLIDNLHN-SVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKFE 83 (335)
Q Consensus 6 ~vlItGatG~iG~~l~~~L~~~-g~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~d 83 (335)
+|.|+||||++|+.|++.|.+. .++++.+..++. .............. -..+.+. | .+.+.+ . .+|
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~~~~~~~~~---~~~~~~~--~-~~~~~~----~--~~D 68 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSRSAGKPLSEVFPHPKG---FEDLSVE--D-ADPEEL----S--DVD 68 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHHHTTGGGTT---TEEEBEE--E-TSGHHH----T--TES
T ss_pred CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeeccccCCeeehhcccccc---ccceeEe--e-cchhHh----h--cCC
Confidence 6899999999999999999995 466555444333 22222111111000 0112222 2 333322 4 789
Q ss_pred EEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEecccc
Q 019795 84 AVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSAT 134 (335)
Q Consensus 84 ~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~ 134 (335)
+||.|.+... ...+...+.+.|+ ++|=.|+..
T Consensus 69 vvf~a~~~~~------------------~~~~~~~~~~~g~-~ViD~s~~~ 100 (121)
T PF01118_consen 69 VVFLALPHGA------------------SKELAPKLLKAGI-KVIDLSGDF 100 (121)
T ss_dssp EEEE-SCHHH------------------HHHHHHHHHHTTS-EEEESSSTT
T ss_pred EEEecCchhH------------------HHHHHHHHhhCCc-EEEeCCHHH
Confidence 9998755321 2235556666775 777777754
|
This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C .... |
| >COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=97.44 E-value=0.0013 Score=58.11 Aligned_cols=115 Identities=20% Similarity=0.225 Sum_probs=77.3
Q ss_pred CeEEEEcCCChhhHHHHHHHHhCC--CeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCC
Q 019795 5 KNILVTGGAGFIGTHCALQLLQGG--FKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKF 82 (335)
Q Consensus 5 ~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~ 82 (335)
++|.|+|+ |+||+.++..|+.++ .+++++++.........-.+.+...... .. ..+.+| .+ . +.++ +.
T Consensus 1 ~KVaviGa-G~VG~s~a~~l~~~~~~~el~LiDi~~~~~~G~a~DL~~~~~~~~-~~-~~i~~~-~~---y-~~~~--~a 70 (313)
T COG0039 1 MKVAVIGA-GNVGSSLAFLLLLQGLGSELVLIDINEEKAEGVALDLSHAAAPLG-SD-VKITGD-GD---Y-EDLK--GA 70 (313)
T ss_pred CeEEEECC-ChHHHHHHHHHhcccccceEEEEEcccccccchhcchhhcchhcc-Cc-eEEecC-CC---h-hhhc--CC
Confidence 58999999 999999999998775 4899999986655555555554332111 11 122222 11 2 2344 78
Q ss_pred CEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEec
Q 019795 83 EAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSS 131 (335)
Q Consensus 83 d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~S 131 (335)
|+|+-.||.+.-. ...-.+++..|......+.+...+.+.+.++.+-
T Consensus 71 DiVvitAG~prKp--GmtR~DLl~~Na~I~~~i~~~i~~~~~d~ivlVv 117 (313)
T COG0039 71 DIVVITAGVPRKP--GMTRLDLLEKNAKIVKDIAKAIAKYAPDAIVLVV 117 (313)
T ss_pred CEEEEeCCCCCCC--CCCHHHHHHhhHHHHHHHHHHHHhhCCCeEEEEe
Confidence 9999999875322 2344578899999999999999888755444433
|
|
| >PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.43 E-value=0.00057 Score=61.68 Aligned_cols=30 Identities=27% Similarity=0.399 Sum_probs=26.9
Q ss_pred CCCCCeEEEEcCCChhhHHHHHHHHhCCCe
Q 019795 1 MASEKNILVTGGAGFIGTHCALQLLQGGFK 30 (335)
Q Consensus 1 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~ 30 (335)
|.+|++|.|+||||++|+.|++.|.++++.
T Consensus 1 m~~~~~IaIvGATG~vG~eLlrlL~~~~hP 30 (336)
T PRK05671 1 MSQPLDIAVVGATGTVGEALVQILEERDFP 30 (336)
T ss_pred CCCCCEEEEEccCCHHHHHHHHHHhhCCCC
Confidence 778889999999999999999999976653
|
|
| >PRK08762 molybdopterin biosynthesis protein MoeB; Validated | Back alignment and domain information |
|---|
Probab=97.41 E-value=0.0022 Score=59.19 Aligned_cols=110 Identities=22% Similarity=0.283 Sum_probs=70.0
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCC-eEEEEecC-------------------CCCchhhHHhhhhhcCCccccceeE
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGF-KVVLIDNL-------------------HNSVPEAVDRVKDLAGPELAKKLEF 62 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~-------------------~~~~~~~~~~~~~~~~~~~~~~i~~ 62 (335)
+.++|+|.|+ |.+|+++++.|+..|. ++++++++ ..+.....+++.++.+ .-.+..
T Consensus 134 ~~~~VlvvG~-GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np---~v~v~~ 209 (376)
T PRK08762 134 LEARVLLIGA-GGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNP---DVQVEA 209 (376)
T ss_pred hcCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCC---CCEEEE
Confidence 5678999987 8999999999999996 68888876 2233333444443321 123444
Q ss_pred EEccCCCHHHHHHHHhcCCCCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccC
Q 019795 63 HVGDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYG 137 (335)
Q Consensus 63 ~~~Dl~d~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg 137 (335)
+...+. .+.+.++++ ++|+||++.... ..-..+-++|.+.++ .+|+.+....+|
T Consensus 210 ~~~~~~-~~~~~~~~~--~~D~Vv~~~d~~-----------------~~r~~ln~~~~~~~i-p~i~~~~~g~~g 263 (376)
T PRK08762 210 VQERVT-SDNVEALLQ--DVDVVVDGADNF-----------------PTRYLLNDACVKLGK-PLVYGAVFRFEG 263 (376)
T ss_pred EeccCC-hHHHHHHHh--CCCEEEECCCCH-----------------HHHHHHHHHHHHcCC-CEEEEEeccCEE
Confidence 444443 345677777 789999875431 111235567777774 677776655444
|
|
| >KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.41 E-value=0.00092 Score=67.38 Aligned_cols=167 Identities=18% Similarity=0.213 Sum_probs=108.7
Q ss_pred CCCCCeEEEEcCCChhhHHHHHHHHhCCCe-EEEEecCCCCch---hhHHhhhhhcCCccccceeEEEccCCCHHHHHHH
Q 019795 1 MASEKNILVTGGAGFIGTHCALQLLQGGFK-VVLIDNLHNSVP---EAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKL 76 (335)
Q Consensus 1 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~---~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~ 76 (335)
|-..|+.+|+||-|+.|..|++-|..+|.+ ++..+|+--+.. ....+... .+ -++.+-..|++.....+.+
T Consensus 1765 ~hpeksYii~GGLGGFGLELaqWLi~RGar~lVLtSRsGirtGYQa~~vrrWr~-~G----VqV~vsT~nitt~~ga~~L 1839 (2376)
T KOG1202|consen 1765 CHPEKSYIIVGGLGGFGLELAQWLIQRGARKLVLTSRSGIRTGYQALMVRRWRR-RG----VQVQVSTSNITTAEGARGL 1839 (2376)
T ss_pred cCccceEEEeccccchhHHHHHHHHhcCceEEEEeccccchhhHHHHHHHHHHh-cC----eEEEEecccchhhhhHHHH
Confidence 345688999999999999999999999976 555666543321 12222222 11 3455555678877777777
Q ss_pred Hhc----CCCCEEEEcccccc----hhhhhcChHHHHHHhHHHHHHHHHHHHHcC--CCEEEEeccccccCCCCCCCccC
Q 019795 77 FSS----QKFEAVIHFGALKA----VAESVQHPFRYFDNNLIGTINLYQAMAKYN--CKKLVFSSSATIYGQPEKIPCVE 146 (335)
Q Consensus 77 ~~~----~~~d~vi~~a~~~~----~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~--~~~~v~~Ss~~vyg~~~~~~~~e 146 (335)
++. +-+-.|||+|++.. ...+.+++...-+.-+.||.++=+.-++.. .+.||.+||.+- |.
T Consensus 1840 i~~s~kl~~vGGiFnLA~VLRD~LiEnQt~knFk~va~pK~~~Ti~LD~~sRe~C~~LdyFv~FSSvsc-GR-------- 1910 (2376)
T KOG1202|consen 1840 IEESNKLGPVGGIFNLAAVLRDGLIENQTPKNFKDVAKPKYSGTINLDRVSREICPELDYFVVFSSVSC-GR-------- 1910 (2376)
T ss_pred HHHhhhcccccchhhHHHHHHhhhhcccChhHHHhhhccceeeeeehhhhhhhhCcccceEEEEEeecc-cC--------
Confidence 764 35678899998732 122344445555556667777777666653 478999998542 21
Q ss_pred CCCCCCCChhHHhHHHHHHHHHHHHhhCCCCeEEEEecc
Q 019795 147 DFPYGAMNPYGRTKQWCEEIAFDVQKADPEWRIILLRYF 185 (335)
Q Consensus 147 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~lR~~ 185 (335)
.-...+.||.+..+.|+++..-..+ |++-+.+--+
T Consensus 1911 --GN~GQtNYG~aNS~MERiceqRr~~--GfPG~AiQWG 1945 (2376)
T KOG1202|consen 1911 --GNAGQTNYGLANSAMERICEQRRHE--GFPGTAIQWG 1945 (2376)
T ss_pred --CCCcccccchhhHHHHHHHHHhhhc--CCCcceeeee
Confidence 1123467999999999999754433 6665555443
|
|
| >cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family | Back alignment and domain information |
|---|
Probab=97.39 E-value=0.0013 Score=57.55 Aligned_cols=114 Identities=19% Similarity=0.249 Sum_probs=78.5
Q ss_pred EEEEcCCChhhHHHHHHHHhCC----CeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCC
Q 019795 7 ILVTGGAGFIGTHCALQLLQGG----FKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKF 82 (335)
Q Consensus 7 vlItGatG~iG~~l~~~L~~~g----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~ 82 (335)
|.|+||+|.+|..++..|+..| .+++++++++.........+.+..... .... +.-.++..+.++ +.
T Consensus 1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~~--~~~~-----i~~~~d~~~~~~--~a 71 (263)
T cd00650 1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEPL--ADIK-----VSITDDPYEAFK--DA 71 (263)
T ss_pred CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhhhhc--cCcE-----EEECCchHHHhC--CC
Confidence 5799999999999999999988 789999998877776666666554311 0111 111223445566 78
Q ss_pred CEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCC-EEEEec
Q 019795 83 EAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCK-KLVFSS 131 (335)
Q Consensus 83 d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~-~~v~~S 131 (335)
|+||-+++..... ...-......|+.....+++.+++...+ .++.+|
T Consensus 72 DiVv~t~~~~~~~--g~~r~~~~~~n~~i~~~i~~~i~~~~p~a~~i~~t 119 (263)
T cd00650 72 DVVIITAGVGRKP--GMGRLDLLKRNVPIVKEIGDNIEKYSPDAWIIVVS 119 (263)
T ss_pred CEEEECCCCCCCc--CCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence 9999999875332 2233456777999999999998887544 444444
|
Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains |
| >COG4982 3-oxoacyl-[acyl-carrier protein] | Back alignment and domain information |
|---|
Probab=97.39 E-value=0.005 Score=58.40 Aligned_cols=158 Identities=19% Similarity=0.203 Sum_probs=97.5
Q ss_pred CCCeEEEEcCC-ChhhHHHHHHHHhCCCeEEEEecCCC-CchhhHHhh-hhhcCCccccceeEEEccCCCHHHHHHHHhc
Q 019795 3 SEKNILVTGGA-GFIGTHCALQLLQGGFKVVLIDNLHN-SVPEAVDRV-KDLAGPELAKKLEFHVGDLRNKDDLDKLFSS 79 (335)
Q Consensus 3 ~~~~vlItGat-G~iG~~l~~~L~~~g~~V~~~~r~~~-~~~~~~~~~-~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~ 79 (335)
..+.+|||||+ |-||..+++.|+..|..|++...+-. ...+.+..| .+.. -....+-++.+++....+++++++-
T Consensus 395 ~d~valVTGA~~gSIaa~Vv~~LL~gGAtVI~TTS~~s~~r~efyr~LYa~~a--~~ga~LwvVpaN~~SysDVdAlIew 472 (866)
T COG4982 395 GDKVALVTGASKGSIAAAVVARLLAGGATVIATTSRLSEERTEFYRSLYARHA--RYGAALWVVPANMGSYSDVDALIEW 472 (866)
T ss_pred ccceEEEecCCCcchHHHHHHHHHhCCcEEEEEcccccHHHHHHHHHHHHhhC--CCCceEEEEeccccchhhHHHHHHH
Confidence 45789999986 78999999999999999988754322 222222222 1111 1124577788899888888888763
Q ss_pred -------------------CCCCEEEEcccccchhh-hh--cChHHHHHHhHHHHHHHHHHHHHcCCC-------EEEEe
Q 019795 80 -------------------QKFEAVIHFGALKAVAE-SV--QHPFRYFDNNLIGTINLYQAMAKYNCK-------KLVFS 130 (335)
Q Consensus 80 -------------------~~~d~vi~~a~~~~~~~-~~--~~~~~~~~~nv~~~~~l~~~~~~~~~~-------~~v~~ 130 (335)
..+|.+|-+|++..... .. ...+..+++=+...++++-.+++.+.. ++|..
T Consensus 473 Ig~eq~~t~g~~s~~~k~a~~ptll~PFAAp~v~G~l~~agsraE~~~rilLw~V~Rliggl~~~~s~r~v~~R~hVVLP 552 (866)
T COG4982 473 IGDEQTETVGPQSIHIKLAWTPTLLFPFAAPRVSGELADAGSRAEFAMRILLWNVLRLIGGLKKQGSSRGVDTRLHVVLP 552 (866)
T ss_pred hccccccccCCcceecccccCcceeeecccCCccCccccCCchHHHHHHHHHHHHHHHHHHhhhhccccCcccceEEEec
Confidence 14678888888753221 11 112234555555666666666654321 35555
Q ss_pred ccccccCCCCCCCccCCCCCCCCChhHHhHHHHHHHHHHHHhhC
Q 019795 131 SSATIYGQPEKIPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKAD 174 (335)
Q Consensus 131 Ss~~vyg~~~~~~~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~ 174 (335)
.|-.- .-......|+.+|+..|-++..++.+.
T Consensus 553 gSPNr------------G~FGgDGaYgEsK~aldav~~RW~sEs 584 (866)
T COG4982 553 GSPNR------------GMFGGDGAYGESKLALDAVVNRWHSES 584 (866)
T ss_pred CCCCC------------CccCCCcchhhHHHHHHHHHHHhhccc
Confidence 54210 012223579999999999988877664
|
|
| >PRK14874 aspartate-semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.39 E-value=0.0011 Score=60.04 Aligned_cols=94 Identities=21% Similarity=0.197 Sum_probs=57.0
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhCCCe---EEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcC
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQGGFK---VVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQ 80 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~g~~---V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~ 80 (335)
|++|+|.||||++|+.|++.|.+++|. ++.+.+......... + .+......|+.+. .++
T Consensus 1 ~~~V~IvGAtG~vG~~l~~lL~~~~hp~~~l~~l~s~~~~g~~l~--~---------~g~~i~v~d~~~~-----~~~-- 62 (334)
T PRK14874 1 GYNVAVVGATGAVGREMLNILEERNFPVDKLRLLASARSAGKELS--F---------KGKELKVEDLTTF-----DFS-- 62 (334)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCCcceEEEEEccccCCCeee--e---------CCceeEEeeCCHH-----HHc--
Confidence 468999999999999999999997764 466665433221110 0 1123344455432 233
Q ss_pred CCCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEecccc
Q 019795 81 KFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSAT 134 (335)
Q Consensus 81 ~~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~ 134 (335)
++|+||-+++... +..++..+.+.|+ .+|=.|+..
T Consensus 63 ~vDvVf~A~g~g~------------------s~~~~~~~~~~G~-~VIDlS~~~ 97 (334)
T PRK14874 63 GVDIALFSAGGSV------------------SKKYAPKAAAAGA-VVIDNSSAF 97 (334)
T ss_pred CCCEEEECCChHH------------------HHHHHHHHHhCCC-EEEECCchh
Confidence 6899998765421 1224444555565 677677754
|
|
| >PRK05597 molybdopterin biosynthesis protein MoeB; Validated | Back alignment and domain information |
|---|
Probab=97.36 E-value=0.0027 Score=57.96 Aligned_cols=111 Identities=16% Similarity=0.131 Sum_probs=69.2
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCC-------------------CchhhHHhhhhhcCCcccccee
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGF-KVVLIDNLHN-------------------SVPEAVDRVKDLAGPELAKKLE 61 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~-------------------~~~~~~~~~~~~~~~~~~~~i~ 61 (335)
+++++|+|.|+ |.+|+++++.|+..|. ++++++...- +.+.+.+++.++-+ .-+++
T Consensus 26 L~~~~VlivG~-GGlGs~~a~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np---~v~v~ 101 (355)
T PRK05597 26 LFDAKVAVIGA-GGLGSPALLYLAGAGVGHITIIDDDTVDLSNLHRQVIHSTAGVGQPKAESAREAMLALNP---DVKVT 101 (355)
T ss_pred HhCCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEEcccccccCcccChhHCCChHHHHHHHHHHHHCC---CcEEE
Confidence 45689999998 9999999999999985 5777765531 22223333333221 13455
Q ss_pred EEEccCCCHHHHHHHHhcCCCCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccC
Q 019795 62 FHVGDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYG 137 (335)
Q Consensus 62 ~~~~Dl~d~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg 137 (335)
.+...++. +...++++ ++|+||.+... ...-..+-++|.+.++ .+|+.++.+.+|
T Consensus 102 ~~~~~i~~-~~~~~~~~--~~DvVvd~~d~-----------------~~~r~~~n~~c~~~~i-p~v~~~~~g~~g 156 (355)
T PRK05597 102 VSVRRLTW-SNALDELR--DADVILDGSDN-----------------FDTRHLASWAAARLGI-PHVWASILGFDA 156 (355)
T ss_pred EEEeecCH-HHHHHHHh--CCCEEEECCCC-----------------HHHHHHHHHHHHHcCC-CEEEEEEecCeE
Confidence 55556653 45666777 78999986543 1112235566777764 577766555444
|
|
| >PLN00112 malate dehydrogenase (NADP); Provisional | Back alignment and domain information |
|---|
Probab=97.33 E-value=0.0026 Score=59.24 Aligned_cols=116 Identities=18% Similarity=0.186 Sum_probs=81.5
Q ss_pred CeEEEEcCCChhhHHHHHHHHhC-------CC--eEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHH
Q 019795 5 KNILVTGGAGFIGTHCALQLLQG-------GF--KVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDK 75 (335)
Q Consensus 5 ~~vlItGatG~iG~~l~~~L~~~-------g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~ 75 (335)
-+|.|+|++|.+|.+++..|+.. |. +++.++++........-++.+...+.. ..+.+. . .+. +
T Consensus 101 ~KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~~~-~~v~i~-~--~~y----e 172 (444)
T PLN00112 101 INVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYPLL-REVSIG-I--DPY----E 172 (444)
T ss_pred eEEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhhhc-CceEEe-c--CCH----H
Confidence 47999999999999999999987 54 788999988887776666665432111 122211 1 122 2
Q ss_pred HHhcCCCCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHH-cCCC-EEEEecc
Q 019795 76 LFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAK-YNCK-KLVFSSS 132 (335)
Q Consensus 76 ~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~-~~~~-~~v~~Ss 132 (335)
.++ ..|+||-+||.+.. ..++-.+.++.|+.....+.+.+.+ .+.. .+|.+|.
T Consensus 173 ~~k--daDiVVitAG~prk--pG~tR~dLl~~N~~I~k~i~~~I~~~a~p~~ivIVVsN 227 (444)
T PLN00112 173 VFQ--DAEWALLIGAKPRG--PGMERADLLDINGQIFAEQGKALNEVASRNVKVIVVGN 227 (444)
T ss_pred HhC--cCCEEEECCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEcCC
Confidence 344 68999999998532 2345557899999999999999988 4543 5666664
|
|
| >PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.33 E-value=0.00052 Score=61.53 Aligned_cols=38 Identities=26% Similarity=0.411 Sum_probs=32.9
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCch
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVP 42 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~ 42 (335)
+++|.|+| .|.+|+.++..|++.|++|++.++++....
T Consensus 2 ~~~V~VIG-~G~mG~~iA~~la~~G~~V~v~d~~~~~~~ 39 (308)
T PRK06129 2 MGSVAIIG-AGLIGRAWAIVFARAGHEVRLWDADPAAAA 39 (308)
T ss_pred CcEEEEEC-ccHHHHHHHHHHHHCCCeeEEEeCCHHHHH
Confidence 45899999 599999999999999999999999765433
|
|
| >PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated | Back alignment and domain information |
|---|
Probab=97.30 E-value=0.0016 Score=59.25 Aligned_cols=34 Identities=18% Similarity=0.316 Sum_probs=29.4
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhC-CCeEEEEecC
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQG-GFKVVLIDNL 37 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~-g~~V~~~~r~ 37 (335)
|++|+|.||||++|+.+++.|.+. +++++++.+.
T Consensus 2 m~kVaIiGAtG~vG~~l~~~L~~~p~~elv~v~~~ 36 (343)
T PRK00436 2 MIKVGIVGASGYTGGELLRLLLNHPEVEIVAVTSR 36 (343)
T ss_pred CeEEEEECCCCHHHHHHHHHHHcCCCceEEEEECc
Confidence 579999999999999999999986 6788776653
|
|
| >PRK08328 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.30 E-value=0.0046 Score=52.92 Aligned_cols=111 Identities=21% Similarity=0.303 Sum_probs=67.8
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCCchhh--------------------HHhhhhhcCCcccccee
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGF-KVVLIDNLHNSVPEA--------------------VDRVKDLAGPELAKKLE 61 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~--------------------~~~~~~~~~~~~~~~i~ 61 (335)
+.++|+|.|+ |.+|+++++.|+..|. +++++|.+.-..... ..++.++ +..-.+.
T Consensus 26 ~~~~VlIiG~-GGlGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~~k~~~a~~~l~~~---np~v~v~ 101 (231)
T PRK08328 26 KKAKVAVVGV-GGLGSPVAYYLAAAGVGRILLIDEQTPELSNLNRQILHWEEDLGKNPKPLSAKWKLERF---NSDIKIE 101 (231)
T ss_pred hCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCccChhhhccccccChhhcCchHHHHHHHHHHHHh---CCCCEEE
Confidence 4678999997 9999999999999994 577776543221100 0111111 1113444
Q ss_pred EEEccCCCHHHHHHHHhcCCCCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccCC
Q 019795 62 FHVGDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQ 138 (335)
Q Consensus 62 ~~~~Dl~d~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~ 138 (335)
.+...+ +++.+.++++ +.|+||.+.... ..-..+-++|++.++ .+|+.++.+.||.
T Consensus 102 ~~~~~~-~~~~~~~~l~--~~D~Vid~~d~~-----------------~~r~~l~~~~~~~~i-p~i~g~~~g~~G~ 157 (231)
T PRK08328 102 TFVGRL-SEENIDEVLK--GVDVIVDCLDNF-----------------ETRYLLDDYAHKKGI-PLVHGAVEGTYGQ 157 (231)
T ss_pred EEeccC-CHHHHHHHHh--cCCEEEECCCCH-----------------HHHHHHHHHHHHcCC-CEEEEeeccCEEE
Confidence 445455 3455677777 779998764331 111234556777774 6888888777765
|
|
| >PRK06849 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.29 E-value=0.0014 Score=60.89 Aligned_cols=81 Identities=17% Similarity=0.226 Sum_probs=54.4
Q ss_pred CCCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCH----HHHHHH
Q 019795 1 MASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNK----DDLDKL 76 (335)
Q Consensus 1 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~----~~~~~~ 76 (335)
|.++|+|||||++..+|..+++.|.+.|++|++++..+..... ..+.. +....+...-.+. +.+.++
T Consensus 1 ~~~~~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~~~~~~~~-~s~~~--------d~~~~~p~p~~d~~~~~~~L~~i 71 (389)
T PRK06849 1 MNTKKTVLITGARAPAALELARLFHNAGHTVILADSLKYPLSR-FSRAV--------DGFYTIPSPRWDPDAYIQALLSI 71 (389)
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHH-HHHhh--------hheEEeCCCCCCHHHHHHHHHHH
Confidence 7789999999999999999999999999999999876533221 11111 1111121111232 455666
Q ss_pred HhcCCCCEEEEccc
Q 019795 77 FSSQKFEAVIHFGA 90 (335)
Q Consensus 77 ~~~~~~d~vi~~a~ 90 (335)
+++.++|+||-+..
T Consensus 72 ~~~~~id~vIP~~e 85 (389)
T PRK06849 72 VQRENIDLLIPTCE 85 (389)
T ss_pred HHHcCCCEEEECCh
Confidence 77778999997544
|
|
| >TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent | Back alignment and domain information |
|---|
Probab=97.28 E-value=0.0027 Score=56.70 Aligned_cols=114 Identities=16% Similarity=0.109 Sum_probs=74.8
Q ss_pred eEEEEcCCChhhHHHHHHHHhCC--CeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCCC
Q 019795 6 NILVTGGAGFIGTHCALQLLQGG--FKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKFE 83 (335)
Q Consensus 6 ~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~d 83 (335)
+|.|+|++|.||++++..|+.++ .+++++++.+ .....-.+.+.. ....+.... +.+++.+.++ +.|
T Consensus 1 KV~IiGaaG~VG~~~a~~l~~~~~~~elvL~Di~~--a~g~a~DL~~~~-----~~~~i~~~~--~~~~~~~~~~--daD 69 (312)
T TIGR01772 1 KVAVLGAAGGIGQPLSLLLKLQPYVSELSLYDIAG--AAGVAADLSHIP-----TAASVKGFS--GEEGLENALK--GAD 69 (312)
T ss_pred CEEEECCCCHHHHHHHHHHHhCCCCcEEEEecCCC--CcEEEchhhcCC-----cCceEEEec--CCCchHHHcC--CCC
Confidence 58999999999999999998886 4789998866 222222233311 111222101 1112334565 789
Q ss_pred EEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCC-EEEEecc
Q 019795 84 AVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCK-KLVFSSS 132 (335)
Q Consensus 84 ~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~-~~v~~Ss 132 (335)
+||-+||.... ..++-...+..|+.....+.+.+.+.+.+ .++.+|.
T Consensus 70 ivvitaG~~~~--~g~~R~dll~~N~~I~~~i~~~i~~~~p~~iiivvsN 117 (312)
T TIGR01772 70 VVVIPAGVPRK--PGMTRDDLFNVNAGIVKDLVAAVAESCPKAMILVITN 117 (312)
T ss_pred EEEEeCCCCCC--CCccHHHHHHHhHHHHHHHHHHHHHhCCCeEEEEecC
Confidence 99999998532 23455578999999999999998888654 4555554
|
Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases. |
| >PRK06223 malate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.27 E-value=0.0033 Score=56.37 Aligned_cols=117 Identities=16% Similarity=0.181 Sum_probs=72.9
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCC
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQGGF-KVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKF 82 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~ 82 (335)
|++|.|.|+ |.+|+.++..|+..|. +|+++++++.........+.+..... .....+ .. ..+... ++ +.
T Consensus 2 ~~KI~VIGa-G~vG~~ia~~la~~~~~ev~L~D~~~~~~~~~~~dl~~~~~~~-~~~~~i-~~----~~d~~~-~~--~a 71 (307)
T PRK06223 2 RKKISIIGA-GNVGATLAHLLALKELGDVVLFDIVEGVPQGKALDIAEAAPVE-GFDTKI-TG----TNDYED-IA--GS 71 (307)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEEECCCchhHHHHHHHHhhhhhc-CCCcEE-Ee----CCCHHH-HC--CC
Confidence 579999999 9999999999998865 89999997665433332222221100 001111 11 112333 44 78
Q ss_pred CEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCC-EEEEecc
Q 019795 83 EAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCK-KLVFSSS 132 (335)
Q Consensus 83 d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~-~~v~~Ss 132 (335)
|+||.+++.+... ...-.+....|+.....+++.+.+...+ .+|.+|.
T Consensus 72 DiVii~~~~p~~~--~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~viv~tN 120 (307)
T PRK06223 72 DVVVITAGVPRKP--GMSRDDLLGINAKIMKDVAEGIKKYAPDAIVIVVTN 120 (307)
T ss_pred CEEEECCCCCCCc--CCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 9999998875321 2233456677888888888888776543 4555543
|
|
| >PRK08644 thiamine biosynthesis protein ThiF; Provisional | Back alignment and domain information |
|---|
Probab=97.27 E-value=0.0055 Score=51.67 Aligned_cols=112 Identities=21% Similarity=0.291 Sum_probs=68.2
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCe-EEEEecCCC------------------CchhhHHhhhhhcCCccccceeE
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFK-VVLIDNLHN------------------SVPEAVDRVKDLAGPELAKKLEF 62 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~-V~~~~r~~~------------------~~~~~~~~~~~~~~~~~~~~i~~ 62 (335)
++.++|+|.|+ |.+|+++++.|++.|.. ++++|.+.- +.....+++..+-+ ...++.
T Consensus 26 L~~~~V~ViG~-GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~dvG~~Ka~~a~~~l~~lnp---~v~v~~ 101 (212)
T PRK08644 26 LKKAKVGIAGA-GGLGSNIAVALARSGVGNLKLVDFDVVEPSNLNRQQYFISQIGMPKVEALKENLLEINP---FVEIEA 101 (212)
T ss_pred HhCCCEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCEeccccccccEeehhhCCChHHHHHHHHHHHHCC---CCEEEE
Confidence 35678999997 99999999999999964 888877621 11112222222211 134555
Q ss_pred EEccCCCHHHHHHHHhcCCCCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHc-CCCEEEEeccccccCC
Q 019795 63 HVGDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKY-NCKKLVFSSSATIYGQ 138 (335)
Q Consensus 63 ~~~Dl~d~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~-~~~~~v~~Ss~~vyg~ 138 (335)
+...+++ +.+.++++ ++|+||.+... ...-..+.+.|.+. + ..+|+.+...-|+.
T Consensus 102 ~~~~i~~-~~~~~~~~--~~DvVI~a~D~-----------------~~~r~~l~~~~~~~~~-~p~I~~~~~~~~~~ 157 (212)
T PRK08644 102 HNEKIDE-DNIEELFK--DCDIVVEAFDN-----------------AETKAMLVETVLEHPG-KKLVAASGMAGYGD 157 (212)
T ss_pred EeeecCH-HHHHHHHc--CCCEEEECCCC-----------------HHHHHHHHHHHHHhCC-CCEEEeehhhccCC
Confidence 5555544 45667777 78999976322 12223455667766 5 46777765554543
|
|
| >PRK05690 molybdopterin biosynthesis protein MoeB; Provisional | Back alignment and domain information |
|---|
Probab=97.23 E-value=0.0074 Score=52.15 Aligned_cols=111 Identities=22% Similarity=0.213 Sum_probs=68.4
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCC-------------------chhhHHhhhhhcCCcccccee
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGF-KVVLIDNLHNS-------------------VPEAVDRVKDLAGPELAKKLE 61 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~-------------------~~~~~~~~~~~~~~~~~~~i~ 61 (335)
++.++|+|.|+ |.+|+++++.|+..|. ++++++.+.-. ...+.+++.++-+ ..+++
T Consensus 30 L~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~Ka~~a~~~l~~lnp---~v~i~ 105 (245)
T PRK05690 30 LKAARVLVVGL-GGLGCAASQYLAAAGVGTLTLVDFDTVSLSNLQRQVLHDDATIGQPKVESARAALARINP---HIAIE 105 (245)
T ss_pred hcCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEECcchhhhhhcCChhhCCChHHHHHHHHHHHHCC---CCEEE
Confidence 35689999998 9999999999999985 57777554322 1112222322211 13455
Q ss_pred EEEccCCCHHHHHHHHhcCCCCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccC
Q 019795 62 FHVGDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYG 137 (335)
Q Consensus 62 ~~~~Dl~d~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg 137 (335)
.+...++ ++.+.++++ .+|+||.+.... ..-..+-++|.+.+ ..+|+.++...+|
T Consensus 106 ~~~~~i~-~~~~~~~~~--~~DiVi~~~D~~-----------------~~r~~ln~~~~~~~-ip~v~~~~~g~~G 160 (245)
T PRK05690 106 TINARLD-DDELAALIA--GHDLVLDCTDNV-----------------ATRNQLNRACFAAK-KPLVSGAAIRMEG 160 (245)
T ss_pred EEeccCC-HHHHHHHHh--cCCEEEecCCCH-----------------HHHHHHHHHHHHhC-CEEEEeeeccCCc
Confidence 5555554 456777787 789999875421 11223556677776 4677766554444
|
|
| >PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=97.20 E-value=0.0032 Score=59.56 Aligned_cols=77 Identities=19% Similarity=0.236 Sum_probs=51.4
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCC
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQK 81 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~ 81 (335)
+.+|+|+|||++| +|...++.|++.|++|++.++.........+.+.. .++.+..+. +..+ ++. ..
T Consensus 3 ~~~k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~~~~~~~~~~l~~-------~g~~~~~~~--~~~~---~~~-~~ 68 (447)
T PRK02472 3 YQNKKVLVLGLAK-SGYAAAKLLHKLGANVTVNDGKPFSENPEAQELLE-------EGIKVICGS--HPLE---LLD-ED 68 (447)
T ss_pred cCCCEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCCCccchhHHHHHHh-------cCCEEEeCC--CCHH---Hhc-Cc
Confidence 3578999999977 99999999999999999998765433333333332 234444332 1121 122 13
Q ss_pred CCEEEEccccc
Q 019795 82 FEAVIHFGALK 92 (335)
Q Consensus 82 ~d~vi~~a~~~ 92 (335)
+|.||..+|+.
T Consensus 69 ~d~vV~s~gi~ 79 (447)
T PRK02472 69 FDLMVKNPGIP 79 (447)
T ss_pred CCEEEECCCCC
Confidence 89999999875
|
|
| >PRK09496 trkA potassium transporter peripheral membrane component; Reviewed | Back alignment and domain information |
|---|
Probab=97.19 E-value=0.0011 Score=62.87 Aligned_cols=73 Identities=21% Similarity=0.250 Sum_probs=56.2
Q ss_pred CeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHH-HhcCCCC
Q 019795 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKL-FSSQKFE 83 (335)
Q Consensus 5 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~-~~~~~~d 83 (335)
|+|+|.|+ |.+|+++++.|.+.|++|+++++++..... +.+. .++.++.+|.++...+.++ ++ ++|
T Consensus 1 m~viIiG~-G~ig~~~a~~L~~~g~~v~vid~~~~~~~~----~~~~------~~~~~~~gd~~~~~~l~~~~~~--~a~ 67 (453)
T PRK09496 1 MKIIIVGA-GQVGYTLAENLSGENNDVTVIDTDEERLRR----LQDR------LDVRTVVGNGSSPDVLREAGAE--DAD 67 (453)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCcEEEEECCHHHHHH----HHhh------cCEEEEEeCCCCHHHHHHcCCC--cCC
Confidence 47999998 999999999999999999999886543222 2110 3578889999998888877 55 688
Q ss_pred EEEEccc
Q 019795 84 AVIHFGA 90 (335)
Q Consensus 84 ~vi~~a~ 90 (335)
.||-+..
T Consensus 68 ~vi~~~~ 74 (453)
T PRK09496 68 LLIAVTD 74 (453)
T ss_pred EEEEecC
Confidence 8886543
|
|
| >PRK05600 thiamine biosynthesis protein ThiF; Validated | Back alignment and domain information |
|---|
Probab=97.19 E-value=0.0052 Score=56.39 Aligned_cols=110 Identities=19% Similarity=0.264 Sum_probs=68.6
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCC-------------------chhhHHhhhhhcCCccccceeE
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGF-KVVLIDNLHNS-------------------VPEAVDRVKDLAGPELAKKLEF 62 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~-------------------~~~~~~~~~~~~~~~~~~~i~~ 62 (335)
+..+|+|.|+ |.+|+++++.|+..|. ++++++.+.-. ...+.+++.++-+ .-+++.
T Consensus 40 ~~~~VliiG~-GglG~~v~~~La~~Gvg~i~ivD~D~ve~sNL~RQ~l~~~~diG~~Ka~~~~~~l~~~np---~v~i~~ 115 (370)
T PRK05600 40 HNARVLVIGA-GGLGCPAMQSLASAGVGTITLIDDDTVDVSNIHRQILFGASDVGRPKVEVAAERLKEIQP---DIRVNA 115 (370)
T ss_pred cCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCCEEccccccccccCChhHCCCHHHHHHHHHHHHHCC---CCeeEE
Confidence 5678999997 9999999999999995 68887765221 1222223332211 134555
Q ss_pred EEccCCCHHHHHHHHhcCCCCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccC
Q 019795 63 HVGDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYG 137 (335)
Q Consensus 63 ~~~Dl~d~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg 137 (335)
+...++ ++.+.++++ ++|+||.+... ...-..+-++|.+.++ .+|+.+....+|
T Consensus 116 ~~~~i~-~~~~~~~~~--~~DlVid~~Dn-----------------~~~r~~in~~~~~~~i-P~v~~~~~g~~G 169 (370)
T PRK05600 116 LRERLT-AENAVELLN--GVDLVLDGSDS-----------------FATKFLVADAAEITGT-PLVWGTVLRFHG 169 (370)
T ss_pred eeeecC-HHHHHHHHh--CCCEEEECCCC-----------------HHHHHHHHHHHHHcCC-CEEEEEEecCEE
Confidence 555554 456777887 78999986443 2222245566777764 577666554443
|
|
| >cd01487 E1_ThiF_like E1_ThiF_like | Back alignment and domain information |
|---|
Probab=97.18 E-value=0.0075 Score=49.20 Aligned_cols=108 Identities=19% Similarity=0.262 Sum_probs=64.8
Q ss_pred eEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCC------------------chhhHHhhhhhcCCccccceeEEEcc
Q 019795 6 NILVTGGAGFIGTHCALQLLQGGF-KVVLIDNLHNS------------------VPEAVDRVKDLAGPELAKKLEFHVGD 66 (335)
Q Consensus 6 ~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~------------------~~~~~~~~~~~~~~~~~~~i~~~~~D 66 (335)
+|+|.|+ |.+|+++++.|++.|. ++++++.+.-+ ......++.++- ...++..+...
T Consensus 1 ~VlViG~-GglGs~ia~~La~~Gvg~i~lvD~D~v~~sNl~Rq~~~~~~vg~~Ka~~~~~~l~~ln---p~v~i~~~~~~ 76 (174)
T cd01487 1 KVGIAGA-GGLGSNIAVLLARSGVGNLKLVDFDVVEPSNLNRQQYFLSQIGEPKVEALKENLREIN---PFVKIEAINIK 76 (174)
T ss_pred CEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCEEcCcchhcccccHhhCCChHHHHHHHHHHHHC---CCCEEEEEEee
Confidence 5899997 9999999999999997 48888776411 111222222221 11345555555
Q ss_pred CCCHHHHHHHHhcCCCCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHc-CCCEEEEeccccccCC
Q 019795 67 LRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKY-NCKKLVFSSSATIYGQ 138 (335)
Q Consensus 67 l~d~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~-~~~~~v~~Ss~~vyg~ 138 (335)
+.. +.+.++++ ++|+||.+... ...-..+.+.+.+. + ..+|+.+....||.
T Consensus 77 ~~~-~~~~~~l~--~~DlVi~~~d~-----------------~~~r~~i~~~~~~~~~-ip~i~~~~~~~~~~ 128 (174)
T cd01487 77 IDE-NNLEGLFG--DCDIVVEAFDN-----------------AETKAMLAESLLGNKN-KPVVCASGMAGFGD 128 (174)
T ss_pred cCh-hhHHHHhc--CCCEEEECCCC-----------------HHHHHHHHHHHHHHCC-CCEEEEehhhccCC
Confidence 543 55777787 78999986332 11122355666555 5 46766655544443
|
Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown. |
| >TIGR02355 moeB molybdopterin synthase sulfurylase MoeB | Back alignment and domain information |
|---|
Probab=97.17 E-value=0.0065 Score=52.26 Aligned_cols=111 Identities=18% Similarity=0.204 Sum_probs=67.5
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCCc-------------------hhhHHhhhhhcCCccccceeE
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGF-KVVLIDNLHNSV-------------------PEAVDRVKDLAGPELAKKLEF 62 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~-------------------~~~~~~~~~~~~~~~~~~i~~ 62 (335)
+.++|+|.|+ |.+|+++++.|+..|. +++++|.+.-.. ..+.+++.++-+ .-.+..
T Consensus 23 ~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~inp---~v~i~~ 98 (240)
T TIGR02355 23 KASRVLIVGL-GGLGCAASQYLAAAGVGNLTLLDFDTVSLSNLQRQVLHSDANIGQPKVESAKDALTQINP---HIAINP 98 (240)
T ss_pred hCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCCcccccCcccceeeeHhhCCCcHHHHHHHHHHHHCC---CcEEEE
Confidence 4678999997 9999999999999984 566666543321 122223322211 123444
Q ss_pred EEccCCCHHHHHHHHhcCCCCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccCC
Q 019795 63 HVGDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQ 138 (335)
Q Consensus 63 ~~~Dl~d~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~ 138 (335)
+...+ +++.+.++++ ++|+||.+.... .....+-++|.+.++ .+|+.++...+|.
T Consensus 99 ~~~~i-~~~~~~~~~~--~~DlVvd~~D~~-----------------~~r~~ln~~~~~~~i-p~v~~~~~g~~G~ 153 (240)
T TIGR02355 99 INAKL-DDAELAALIA--EHDIVVDCTDNV-----------------EVRNQLNRQCFAAKV-PLVSGAAIRMEGQ 153 (240)
T ss_pred EeccC-CHHHHHHHhh--cCCEEEEcCCCH-----------------HHHHHHHHHHHHcCC-CEEEEEecccEeE
Confidence 44334 3456777787 789999864431 112335567777774 6777666555543
|
This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899). |
| >PRK08664 aspartate-semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.15 E-value=0.0028 Score=57.87 Aligned_cols=37 Identities=16% Similarity=0.299 Sum_probs=30.4
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCC-CeEEEEecCCC
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGG-FKVVLIDNLHN 39 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~ 39 (335)
++++|+|+||||++|+.|++.|.+.. .+++.+.++..
T Consensus 2 ~~~~V~I~GatG~iG~~l~~~L~~~p~~el~~~~~s~~ 39 (349)
T PRK08664 2 MKLKVGILGATGMVGQRFVQLLANHPWFEVTALAASER 39 (349)
T ss_pred CCcEEEEECCCCHHHHHHHHHHHcCCCceEEEEEcChh
Confidence 36899999999999999999999764 47888755543
|
|
| >cd05293 LDH_1 A subgroup of L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=97.15 E-value=0.0092 Score=53.46 Aligned_cols=116 Identities=16% Similarity=0.240 Sum_probs=79.2
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhCC--CeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCC
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQGG--FKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQK 81 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~ 81 (335)
.++|.|+|+ |.+|+.++..|+..| .++++++.++.........+.+..... ....+... .| ... ++ +
T Consensus 3 ~~Ki~IiGa-G~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~--~~~~v~~~--~d---y~~-~~--~ 71 (312)
T cd05293 3 RNKVTVVGV-GQVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAFL--KNPKIEAD--KD---YSV-TA--N 71 (312)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhccC--CCCEEEEC--CC---HHH-hC--C
Confidence 468999997 999999999998876 579999987766655566665543211 11122211 12 333 44 7
Q ss_pred CCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCC-EEEEecc
Q 019795 82 FEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCK-KLVFSSS 132 (335)
Q Consensus 82 ~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~-~~v~~Ss 132 (335)
.|+||-+||.... ..++-...+..|+.....+.+.+++.+.+ .++.+|.
T Consensus 72 adivvitaG~~~k--~g~~R~dll~~N~~i~~~~~~~i~~~~p~~~vivvsN 121 (312)
T cd05293 72 SKVVIVTAGARQN--EGESRLDLVQRNVDIFKGIIPKLVKYSPNAILLVVSN 121 (312)
T ss_pred CCEEEECCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEccC
Confidence 8999999987532 23344578889999999999999888644 4555554
|
L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=97.14 E-value=0.0025 Score=55.78 Aligned_cols=103 Identities=16% Similarity=0.151 Sum_probs=66.8
Q ss_pred CCCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCC-CHHHHHHHHhc
Q 019795 1 MASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLR-NKDDLDKLFSS 79 (335)
Q Consensus 1 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~-d~~~~~~~~~~ 79 (335)
|..++.+.|+|+.| +|.--++.-.+.|++|++++++..+.+++.+.|.. + ...|.+ |++.+.++.+
T Consensus 179 ~~pG~~vgI~GlGG-LGh~aVq~AKAMG~rV~vis~~~~kkeea~~~LGA----------d-~fv~~~~d~d~~~~~~~- 245 (360)
T KOG0023|consen 179 LGPGKWVGIVGLGG-LGHMAVQYAKAMGMRVTVISTSSKKKEEAIKSLGA----------D-VFVDSTEDPDIMKAIMK- 245 (360)
T ss_pred CCCCcEEEEecCcc-cchHHHHHHHHhCcEEEEEeCCchhHHHHHHhcCc----------c-eeEEecCCHHHHHHHHH-
Confidence 34678999999988 99888888777899999999987776666665532 2 223444 7787877777
Q ss_pred CCCCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEecccc
Q 019795 80 QKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSAT 134 (335)
Q Consensus 80 ~~~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~ 134 (335)
.-|.++|++.... ... ...+++.++..| ++|+++-..
T Consensus 246 -~~dg~~~~v~~~a----~~~-----------~~~~~~~lk~~G--t~V~vg~p~ 282 (360)
T KOG0023|consen 246 -TTDGGIDTVSNLA----EHA-----------LEPLLGLLKVNG--TLVLVGLPE 282 (360)
T ss_pred -hhcCcceeeeecc----ccc-----------hHHHHHHhhcCC--EEEEEeCcC
Confidence 3344554433110 010 112555566555 888888643
|
|
| >PRK08223 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=97.13 E-value=0.0057 Score=53.60 Aligned_cols=113 Identities=12% Similarity=0.107 Sum_probs=67.8
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCC-------------------chhhHHhhhhhcCCcccccee
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGF-KVVLIDNLHNS-------------------VPEAVDRVKDLAGPELAKKLE 61 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~-------------------~~~~~~~~~~~~~~~~~~~i~ 61 (335)
++..+|+|.|+ |++|+.+++.|+..|. +++++|.+.-. .+.+.+++.++- ..-+++
T Consensus 25 L~~s~VlIvG~-GGLGs~va~~LA~aGVG~i~lvD~D~Ve~SNLnRQ~l~~~~diG~~Kve~a~~~l~~iN---P~v~V~ 100 (287)
T PRK08223 25 LRNSRVAIAGL-GGVGGIHLLTLARLGIGKFTIADFDVFELRNFNRQAGAMMSTLGRPKAEVLAEMVRDIN---PELEIR 100 (287)
T ss_pred HhcCCEEEECC-CHHHHHHHHHHHHhCCCeEEEEeCCCcchhccccccCcChhHCCCcHHHHHHHHHHHHC---CCCEEE
Confidence 35678999998 9999999999999984 46666554322 112222222221 113455
Q ss_pred EEEccCCCHHHHHHHHhcCCCCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccC
Q 019795 62 FHVGDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYG 137 (335)
Q Consensus 62 ~~~~Dl~d~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg 137 (335)
.+...++ ++.+.++++ ++|+||.+.... ++..-..+-++|.+.++ .+|+.+.....|
T Consensus 101 ~~~~~l~-~~n~~~ll~--~~DlVvD~~D~~---------------~~~~r~~ln~~c~~~~i-P~V~~~~~g~~g 157 (287)
T PRK08223 101 AFPEGIG-KENADAFLD--GVDVYVDGLDFF---------------EFDARRLVFAACQQRGI-PALTAAPLGMGT 157 (287)
T ss_pred EEecccC-ccCHHHHHh--CCCEEEECCCCC---------------cHHHHHHHHHHHHHcCC-CEEEEeccCCeE
Confidence 5555554 345677787 789998653321 11223346677888874 677766554433
|
|
| >cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like | Back alignment and domain information |
|---|
Probab=97.12 E-value=0.0084 Score=50.03 Aligned_cols=113 Identities=17% Similarity=0.265 Sum_probs=68.7
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCe-EEEEecCCCCc---------------------hhhHHhhhhhcCCccccce
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFK-VVLIDNLHNSV---------------------PEAVDRVKDLAGPELAKKL 60 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~---------------------~~~~~~~~~~~~~~~~~~i 60 (335)
+..+|+|.|++ .+|+++++.|+..|.. +++++...-.. ....+++.++- ...++
T Consensus 18 ~~s~VlviG~g-glGsevak~L~~~GVg~i~lvD~d~ve~snl~rq~~~~~~~~~iG~~Ka~~~~~~L~~lN---p~v~i 93 (198)
T cd01485 18 RSAKVLIIGAG-ALGAEIAKNLVLAGIDSITIVDHRLVSTEDLGSNFFLDAEVSNSGMNRAAASYEFLQELN---PNVKL 93 (198)
T ss_pred hhCcEEEECCC-HHHHHHHHHHHHcCCCEEEEEECCcCChhcCcccEecccchhhcCchHHHHHHHHHHHHC---CCCEE
Confidence 46789999985 5999999999999954 77776553211 11112222221 11345
Q ss_pred eEEEccCCC-HHHHHHHHhcCCCCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccCCC
Q 019795 61 EFHVGDLRN-KDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQP 139 (335)
Q Consensus 61 ~~~~~Dl~d-~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~ 139 (335)
+.+..++.+ .+...++++ .+|+||.+... ......+-+.|++.+. .+|+.++.+.||.-
T Consensus 94 ~~~~~~~~~~~~~~~~~~~--~~dvVi~~~d~-----------------~~~~~~ln~~c~~~~i-p~i~~~~~G~~G~v 153 (198)
T cd01485 94 SIVEEDSLSNDSNIEEYLQ--KFTLVIATEEN-----------------YERTAKVNDVCRKHHI-PFISCATYGLIGYA 153 (198)
T ss_pred EEEecccccchhhHHHHHh--CCCEEEECCCC-----------------HHHHHHHHHHHHHcCC-CEEEEEeecCEEEE
Confidence 555555542 345566676 78999865221 1122235577888875 78888887777643
|
E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol |
| >cd05292 LDH_2 A subgroup of L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=97.12 E-value=0.0077 Score=53.96 Aligned_cols=113 Identities=15% Similarity=0.184 Sum_probs=74.7
Q ss_pred CeEEEEcCCChhhHHHHHHHHhCC--CeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCC
Q 019795 5 KNILVTGGAGFIGTHCALQLLQGG--FKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKF 82 (335)
Q Consensus 5 ~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~ 82 (335)
|+|.|.|+ |.+|..++..|+..| .+|++++++..........+.+..... ....... .+ .. .+. +.
T Consensus 1 mkI~IIGa-G~VG~~~a~~l~~~g~~~ev~l~D~~~~~~~g~a~dl~~~~~~~--~~~~i~~---~d---~~-~l~--~a 68 (308)
T cd05292 1 MKVAIVGA-GFVGSTTAYALLLRGLASEIVLVDINKAKAEGEAMDLAHGTPFV--KPVRIYA---GD---YA-DCK--GA 68 (308)
T ss_pred CEEEEECC-CHHHHHHHHHHHHcCCCCEEEEEECCchhhhhHHHHHHcccccc--CCeEEee---CC---HH-HhC--CC
Confidence 37999998 999999999999998 689999997765543333343322111 1122221 12 22 244 78
Q ss_pred CEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCC-EEEEec
Q 019795 83 EAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCK-KLVFSS 131 (335)
Q Consensus 83 d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~-~~v~~S 131 (335)
|+||.+++.... ...+.......|+.....+.+.+.+.+.+ .++.++
T Consensus 69 DiViita~~~~~--~~~~r~dl~~~n~~i~~~~~~~l~~~~~~giiiv~t 116 (308)
T cd05292 69 DVVVITAGANQK--PGETRLDLLKRNVAIFKEIIPQILKYAPDAILLVVT 116 (308)
T ss_pred CEEEEccCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence 999999987532 23344567888999999999998887544 344443
|
L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >COG0002 ArgC Acetylglutamate semialdehyde dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.09 E-value=0.0043 Score=55.17 Aligned_cols=35 Identities=17% Similarity=0.283 Sum_probs=28.6
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhC-CCeEEEEecC
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQG-GFKVVLIDNL 37 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~-g~~V~~~~r~ 37 (335)
+|++|.|.||+|+.|..|.+.|+.. ..++..++.+
T Consensus 1 ~~~kV~IvGasGYtG~EL~rlL~~Hp~ve~~~~ss~ 36 (349)
T COG0002 1 MMIKVGIVGASGYTGLELLRLLAGHPDVELILISSR 36 (349)
T ss_pred CCceEEEEcCCCCcHHHHHHHHhcCCCeEEEEeech
Confidence 4789999999999999999999987 4666655443
|
|
| >cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1 | Back alignment and domain information |
|---|
Probab=97.05 E-value=0.0074 Score=50.29 Aligned_cols=110 Identities=17% Similarity=0.323 Sum_probs=66.2
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCC-------------------chhhHHhhhhhcCCccccceeE
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGF-KVVLIDNLHNS-------------------VPEAVDRVKDLAGPELAKKLEF 62 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~-------------------~~~~~~~~~~~~~~~~~~~i~~ 62 (335)
++++|+|.|+ |.+|+++++.|+..|. +++++|...-+ .+...+++.++-+ .-.++.
T Consensus 20 ~~s~VlIiG~-gglG~evak~La~~GVg~i~lvD~d~ve~snL~rqfl~~~~diG~~Ka~a~~~~L~~lNp---~v~i~~ 95 (197)
T cd01492 20 RSARILLIGL-KGLGAEIAKNLVLSGIGSLTILDDRTVTEEDLGAQFLIPAEDLGQNRAEASLERLRALNP---RVKVSV 95 (197)
T ss_pred HhCcEEEEcC-CHHHHHHHHHHHHcCCCEEEEEECCcccHhhCCCCccccHHHcCchHHHHHHHHHHHHCC---CCEEEE
Confidence 4678999997 5599999999999995 47777654322 1112222332211 134444
Q ss_pred EEccCCCHHHHHHHHhcCCCCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccCC
Q 019795 63 HVGDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQ 138 (335)
Q Consensus 63 ~~~Dl~d~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~ 138 (335)
+...+.+ ...++++ ++|+||.+... ......+-+.|++.++ .+|+.++.+.+|.
T Consensus 96 ~~~~~~~--~~~~~~~--~~dvVi~~~~~-----------------~~~~~~ln~~c~~~~i-p~i~~~~~G~~G~ 149 (197)
T cd01492 96 DTDDISE--KPEEFFS--QFDVVVATELS-----------------RAELVKINELCRKLGV-KFYATGVHGLFGF 149 (197)
T ss_pred EecCccc--cHHHHHh--CCCEEEECCCC-----------------HHHHHHHHHHHHHcCC-CEEEEEecCCEEE
Confidence 4444442 2345666 78999865322 1112235567888875 6888888777664
|
Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain. |
| >PRK04148 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.04 E-value=0.0023 Score=49.33 Aligned_cols=55 Identities=33% Similarity=0.405 Sum_probs=42.7
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHH
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKD 71 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~ 71 (335)
++++++.|. | .|.+++..|.+.|++|++++.++..... ..+ ..+.++.+|+.++.
T Consensus 17 ~~kileIG~-G-fG~~vA~~L~~~G~~ViaIDi~~~aV~~----a~~-------~~~~~v~dDlf~p~ 71 (134)
T PRK04148 17 NKKIVELGI-G-FYFKVAKKLKESGFDVIVIDINEKAVEK----AKK-------LGLNAFVDDLFNPN 71 (134)
T ss_pred CCEEEEEEe-c-CCHHHHHHHHHCCCEEEEEECCHHHHHH----HHH-------hCCeEEECcCCCCC
Confidence 478999997 6 8999999999999999999987653322 221 35688999998764
|
|
| >PRK09496 trkA potassium transporter peripheral membrane component; Reviewed | Back alignment and domain information |
|---|
Probab=97.02 E-value=0.0061 Score=57.79 Aligned_cols=75 Identities=23% Similarity=0.297 Sum_probs=56.0
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCC
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKF 82 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~ 82 (335)
.+++++|.|+ |.+|+.+++.|.+.|++|+++++++... +.+.+.. .++.++.+|.++.+.+.++-- .++
T Consensus 230 ~~~~iiIiG~-G~~g~~l~~~L~~~~~~v~vid~~~~~~----~~~~~~~-----~~~~~i~gd~~~~~~L~~~~~-~~a 298 (453)
T PRK09496 230 PVKRVMIVGG-GNIGYYLAKLLEKEGYSVKLIERDPERA----EELAEEL-----PNTLVLHGDGTDQELLEEEGI-DEA 298 (453)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHH----HHHHHHC-----CCCeEEECCCCCHHHHHhcCC-ccC
Confidence 4688999998 9999999999999999999998764432 2222211 356789999999987765432 367
Q ss_pred CEEEEc
Q 019795 83 EAVIHF 88 (335)
Q Consensus 83 d~vi~~ 88 (335)
|.||-+
T Consensus 299 ~~vi~~ 304 (453)
T PRK09496 299 DAFIAL 304 (453)
T ss_pred CEEEEC
Confidence 888854
|
|
| >cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins | Back alignment and domain information |
|---|
Probab=97.01 E-value=0.018 Score=45.26 Aligned_cols=106 Identities=20% Similarity=0.223 Sum_probs=64.6
Q ss_pred eEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCC-------------------chhhHHhhhhhcCCccccceeEEEc
Q 019795 6 NILVTGGAGFIGTHCALQLLQGGF-KVVLIDNLHNS-------------------VPEAVDRVKDLAGPELAKKLEFHVG 65 (335)
Q Consensus 6 ~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~-------------------~~~~~~~~~~~~~~~~~~~i~~~~~ 65 (335)
+|+|.|+ |.+|+++++.|+..|. ++++++...-+ .....+.+.++.+ .-++..+..
T Consensus 1 ~VliiG~-GglGs~ia~~L~~~Gv~~i~ivD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~~p---~v~i~~~~~ 76 (143)
T cd01483 1 RVLLVGL-GGLGSEIALNLARSGVGKITLIDFDTVELSNLNRQFLARQADIGKPKAEVAARRLNELNP---GVNVTAVPE 76 (143)
T ss_pred CEEEECC-CHHHHHHHHHHHHCCCCEEEEEcCCCcCcchhhccccCChhHCCChHHHHHHHHHHHHCC---CcEEEEEee
Confidence 5899997 9999999999999997 58888654221 1112222222221 134555555
Q ss_pred cCCCHHHHHHHHhcCCCCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEecccccc
Q 019795 66 DLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIY 136 (335)
Q Consensus 66 Dl~d~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vy 136 (335)
++.+.. ..++++ ++|+||.+.... .....+.+.|++.++ .+|..++...+
T Consensus 77 ~~~~~~-~~~~~~--~~diVi~~~d~~-----------------~~~~~l~~~~~~~~i-~~i~~~~~g~~ 126 (143)
T cd01483 77 GISEDN-LDDFLD--GVDLVIDAIDNI-----------------AVRRALNRACKELGI-PVIDAGGLGLG 126 (143)
T ss_pred ecChhh-HHHHhc--CCCEEEECCCCH-----------------HHHHHHHHHHHHcCC-CEEEEcCCCcE
Confidence 554432 356666 789999765431 122346677888774 67777765533
|
This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. |
| >cd05295 MDH_like Malate dehydrogenase-like | Back alignment and domain information |
|---|
Probab=97.01 E-value=0.011 Score=55.13 Aligned_cols=169 Identities=12% Similarity=0.044 Sum_probs=96.5
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhC---C----CeEEEEec--CCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHH
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQG---G----FKVVLIDN--LHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLD 74 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~---g----~~V~~~~r--~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~ 74 (335)
.-+|+||||+|.||.+|+..+++- | ..+++++. .........-.+.+...+.. ..+.+. .| + .
T Consensus 123 p~~V~vtgAag~i~Y~l~~~ia~G~~fG~~~~v~L~LlDi~~~~~~l~G~amDL~D~a~pll-~~v~i~-~~--~----~ 194 (452)
T cd05295 123 PLQVCITNASAPLCYHLIPSLASGEVFGMEEEISIHLLDSPENLEKLKGLVMEVEDLAFPLL-RGISVT-TD--L----D 194 (452)
T ss_pred ceEEEEecCcHHHHHHHHHHHhCCcccCCCCeEEEEEEcCCCchhhHHHHHHHHHHhHHhhc-CCcEEE-EC--C----H
Confidence 356999999999999999999872 3 23556666 23333333334443321111 123222 11 1 2
Q ss_pred HHHhcCCCCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCC--CEEEEecc-cc-c--cCCCCCCCccCCC
Q 019795 75 KLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNC--KKLVFSSS-AT-I--YGQPEKIPCVEDF 148 (335)
Q Consensus 75 ~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~--~~~v~~Ss-~~-v--yg~~~~~~~~e~~ 148 (335)
+.++ ..|+||-+||.+.. ..++-....+.|+.....+.++..+... .+++.+.| -. + |- .-..+
T Consensus 195 ea~~--daDvvIitag~prk--~G~~R~DLL~~N~~Ifk~~g~~I~~~a~~~~~VlVv~tNPvD~~t~i------~~k~a 264 (452)
T cd05295 195 VAFK--DAHVIVLLDDFLIK--EGEDLEGCIRSRVAICQLYGPLIEKNAKEDVKVIVAGRTFLNLKTSI------LIKYA 264 (452)
T ss_pred HHhC--CCCEEEECCCCCCC--cCCCHHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHH------HHHHc
Confidence 4455 78999999998532 2334557889999999999999888754 45555553 11 0 00 00011
Q ss_pred -CCCCCChhHHhHHHHHHHHHHHHhhCCCCeEEEEecccccCCC
Q 019795 149 -PYGAMNPYGRTKQWCEEIAFDVQKADPEWRIILLRYFNPVGAH 191 (335)
Q Consensus 149 -~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~lR~~~v~G~~ 191 (335)
..++...-|.+.....++....+++. +.+...++-..|+|.|
T Consensus 265 pgiP~~rVig~gtlds~R~r~~LA~kl-~V~~~~V~~~~VwGeH 307 (452)
T cd05295 265 PSIPRKNIIAVARLQENRAKALLARKL-NVNSAGIKDVIVWGNI 307 (452)
T ss_pred CCCCHHHEEEecchHHHHHHHHHHHHh-CcCHHHceeeEEEEcc
Confidence 12222334444444344444455554 6666666656677876
|
These MDH-like proteins are related to other groups in the MDH family but do not have conserved substrate and cofactor binding residues. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subgroup are uncharacterized MDH-like proteins from animals. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2 | Back alignment and domain information |
|---|
Probab=96.99 E-value=0.019 Score=48.00 Aligned_cols=80 Identities=18% Similarity=0.367 Sum_probs=52.5
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCC-eEEEEecC---CCCchh---------------hHHhhhhhcCCccccceeE
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGF-KVVLIDNL---HNSVPE---------------AVDRVKDLAGPELAKKLEF 62 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~---~~~~~~---------------~~~~~~~~~~~~~~~~i~~ 62 (335)
++.++|+|.|+ |.+|+.+++.|++.|. +++++|.+ ...... ..+.+.++-+ ...+..
T Consensus 19 L~~~~V~IvG~-GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~~iG~~Ka~~~~~~l~~inp---~~~i~~ 94 (200)
T TIGR02354 19 LEQATVAICGL-GGLGSNVAINLARAGIGKLILVDFDVVEPSNLNRQQYKASQVGEPKTEALKENISEINP---YTEIEA 94 (200)
T ss_pred HhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCEEcccccccccCChhhCCCHHHHHHHHHHHHHCC---CCEEEE
Confidence 35678999998 8999999999999998 68888876 211111 1111111111 134555
Q ss_pred EEccCCCHHHHHHHHhcCCCCEEEEc
Q 019795 63 HVGDLRNKDDLDKLFSSQKFEAVIHF 88 (335)
Q Consensus 63 ~~~Dl~d~~~~~~~~~~~~~d~vi~~ 88 (335)
+..+++ ++.+.++++ ++|+||-+
T Consensus 95 ~~~~i~-~~~~~~~~~--~~DlVi~a 117 (200)
T TIGR02354 95 YDEKIT-EENIDKFFK--DADIVCEA 117 (200)
T ss_pred eeeeCC-HhHHHHHhc--CCCEEEEC
Confidence 555664 456777787 78999976
|
Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter. |
| >PLN02602 lactate dehydrogenase | Back alignment and domain information |
|---|
Probab=96.98 E-value=0.0086 Score=54.42 Aligned_cols=115 Identities=15% Similarity=0.193 Sum_probs=78.8
Q ss_pred CeEEEEcCCChhhHHHHHHHHhCC--CeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCC
Q 019795 5 KNILVTGGAGFIGTHCALQLLQGG--FKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKF 82 (335)
Q Consensus 5 ~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~ 82 (335)
++|.|+|+ |.+|+.++..|+..+ .++++++.++.......-.+.+... .. ....+ .++ .| ... ++ +.
T Consensus 38 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~LiDi~~~~~~g~a~DL~~~~~-~~-~~~~i-~~~-~d---y~~-~~--da 106 (350)
T PLN02602 38 TKVSVVGV-GNVGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQHAAA-FL-PRTKI-LAS-TD---YAV-TA--GS 106 (350)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCCchhhHHHHHHHhhhh-cC-CCCEE-EeC-CC---HHH-hC--CC
Confidence 69999997 999999999999876 4799999987766666666655432 11 12222 211 12 222 44 78
Q ss_pred CEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCC-EEEEecc
Q 019795 83 EAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCK-KLVFSSS 132 (335)
Q Consensus 83 d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~-~~v~~Ss 132 (335)
|+||-+||.... ..++-...+..|+.....+.+.+++.+.+ .+|.+|.
T Consensus 107 DiVVitAG~~~k--~g~tR~dll~~N~~I~~~i~~~I~~~~p~~ivivvtN 155 (350)
T PLN02602 107 DLCIVTAGARQI--PGESRLNLLQRNVALFRKIIPELAKYSPDTILLIVSN 155 (350)
T ss_pred CEEEECCCCCCC--cCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 999999998532 22344578888999999999999887644 4555553
|
|
| >COG1004 Ugd Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=96.93 E-value=0.035 Score=50.39 Aligned_cols=35 Identities=29% Similarity=0.402 Sum_probs=31.0
Q ss_pred CeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCC
Q 019795 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNS 40 (335)
Q Consensus 5 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~ 40 (335)
|+|.|.| +|++|.-.+-.|++.||+|++++.++.+
T Consensus 1 MkI~viG-tGYVGLv~g~~lA~~GHeVv~vDid~~K 35 (414)
T COG1004 1 MKITVIG-TGYVGLVTGACLAELGHEVVCVDIDESK 35 (414)
T ss_pred CceEEEC-CchHHHHHHHHHHHcCCeEEEEeCCHHH
Confidence 5888999 5999999999999999999999986544
|
|
| >PRK00258 aroE shikimate 5-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.90 E-value=0.0024 Score=56.32 Aligned_cols=74 Identities=24% Similarity=0.370 Sum_probs=49.3
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCC-CeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCC
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGG-FKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQK 81 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~ 81 (335)
++++|+|+|+ |.+|++++..|...| .+|++++|+..+.....+.+... ..+.+ ++ +..+.+. .
T Consensus 122 ~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~------~~~~~---~~----~~~~~~~--~ 185 (278)
T PRK00258 122 KGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGAL------GKAEL---DL----ELQEELA--D 185 (278)
T ss_pred CCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhc------cceee---cc----cchhccc--c
Confidence 5689999997 999999999999999 78999999765444333332210 01111 11 1223444 6
Q ss_pred CCEEEEccccc
Q 019795 82 FEAVIHFGALK 92 (335)
Q Consensus 82 ~d~vi~~a~~~ 92 (335)
.|+||++....
T Consensus 186 ~DivInaTp~g 196 (278)
T PRK00258 186 FDLIINATSAG 196 (278)
T ss_pred CCEEEECCcCC
Confidence 89999987653
|
|
| >TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent | Back alignment and domain information |
|---|
Probab=96.89 E-value=0.0098 Score=54.59 Aligned_cols=116 Identities=17% Similarity=0.224 Sum_probs=75.9
Q ss_pred CeEEEEcCCChhhHHHHHHHHhCCC-e----EEE--E--ecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHH
Q 019795 5 KNILVTGGAGFIGTHCALQLLQGGF-K----VVL--I--DNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDK 75 (335)
Q Consensus 5 ~~vlItGatG~iG~~l~~~L~~~g~-~----V~~--~--~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~ 75 (335)
-+|.|+|++|.+|++++..|+..|. . +.+ + +++........-.+.+...+.. ..+.+... + . +
T Consensus 45 ~KV~IIGAaG~VG~~~A~~l~~~~l~~~~~ei~L~L~diD~~~~~a~g~a~DL~d~a~~~~-~~v~i~~~---~---y-~ 116 (387)
T TIGR01757 45 VNVAVSGAAGMISNHLLFMLASGEVFGQDQPIALKLLGSERSKEALEGVAMELEDSLYPLL-REVSIGID---P---Y-E 116 (387)
T ss_pred eEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEeccCccchhhhHHHHHHHHhhhhhc-CceEEecC---C---H-H
Confidence 3799999999999999999998762 2 333 3 6666666555555555432111 12221111 2 2 2
Q ss_pred HHhcCCCCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcC-CC-EEEEecc
Q 019795 76 LFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYN-CK-KLVFSSS 132 (335)
Q Consensus 76 ~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~-~~v~~Ss 132 (335)
.++ ..|+||-+||.+.. ..++-.+.+..|+.....+.+.+.+.. .. .+|.+|.
T Consensus 117 ~~k--daDIVVitAG~prk--pg~tR~dll~~N~~I~k~i~~~I~~~a~~~~iviVVsN 171 (387)
T TIGR01757 117 VFE--DADWALLIGAKPRG--PGMERADLLDINGQIFADQGKALNAVASKNCKVLVVGN 171 (387)
T ss_pred HhC--CCCEEEECCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCC
Confidence 344 78999999998532 234555789999999999999998843 33 5666664
|
This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized. |
| >PRK08057 cobalt-precorrin-6x reductase; Reviewed | Back alignment and domain information |
|---|
Probab=96.89 E-value=0.024 Score=48.85 Aligned_cols=98 Identities=19% Similarity=0.131 Sum_probs=71.9
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCC
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKF 82 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~ 82 (335)
+|++|||.||| .=|+.|++.|.+.|+.|++..-...... . ...+..+.+-+.+.+++.+++.+.++
T Consensus 1 ~~~~IlvlgGT-~egr~la~~L~~~g~~v~~Svat~~g~~------~-------~~~~~v~~G~l~~~~~l~~~l~~~~i 66 (248)
T PRK08057 1 MMPRILLLGGT-SEARALARALAAAGVDIVLSLAGRTGGP------A-------DLPGPVRVGGFGGAEGLAAYLREEGI 66 (248)
T ss_pred CCceEEEEech-HHHHHHHHHHHhCCCeEEEEEccCCCCc------c-------cCCceEEECCCCCHHHHHHHHHHCCC
Confidence 46789999996 4799999999999998877554332210 0 14567777888799999999999999
Q ss_pred CEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEE
Q 019795 83 EAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVF 129 (335)
Q Consensus 83 d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~ 129 (335)
+.||.+.-+.. ...+.++.++|++.++..+=|
T Consensus 67 ~~VIDATHPfA---------------~~is~~a~~ac~~~~ipyiR~ 98 (248)
T PRK08057 67 DLVIDATHPYA---------------AQISANAAAACRALGIPYLRL 98 (248)
T ss_pred CEEEECCCccH---------------HHHHHHHHHHHHHhCCcEEEE
Confidence 99998644421 233567889999998765544
|
|
| >cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase | Back alignment and domain information |
|---|
Probab=96.87 E-value=0.0033 Score=50.14 Aligned_cols=74 Identities=16% Similarity=0.226 Sum_probs=48.8
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCC-CeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCC
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGG-FKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQK 81 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~ 81 (335)
++++++|+|+ |.+|+.+++.|.+.| ++|++++|+........+.+.. ..+..+..+. .++++ .
T Consensus 18 ~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~----------~~~~~~~~~~---~~~~~--~ 81 (155)
T cd01065 18 KGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGE----------LGIAIAYLDL---EELLA--E 81 (155)
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhh----------cccceeecch---hhccc--c
Confidence 4689999997 999999999999986 7899998865443333222211 0011233333 23344 7
Q ss_pred CCEEEEccccc
Q 019795 82 FEAVIHFGALK 92 (335)
Q Consensus 82 ~d~vi~~a~~~ 92 (335)
+|+||.+....
T Consensus 82 ~Dvvi~~~~~~ 92 (155)
T cd01065 82 ADLIINTTPVG 92 (155)
T ss_pred CCEEEeCcCCC
Confidence 89999987764
|
Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann |
| >PRK00048 dihydrodipicolinate reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.86 E-value=0.01 Score=51.72 Aligned_cols=87 Identities=17% Similarity=0.186 Sum_probs=54.5
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhC-CCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCC
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQG-GFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKF 82 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~ 82 (335)
+++|.|+|++|.+|+.+++.+.+. +.+++++.......... . -..++...+++.++++ .+
T Consensus 1 ~mkV~IiG~~G~mG~~i~~~l~~~~~~elvav~d~~~~~~~~---------------~--~~~~i~~~~dl~~ll~--~~ 61 (257)
T PRK00048 1 MIKVAVAGASGRMGRELIEAVEAAEDLELVAAVDRPGSPLVG---------------Q--GALGVAITDDLEAVLA--DA 61 (257)
T ss_pred CcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCccccc---------------c--CCCCccccCCHHHhcc--CC
Confidence 358999999999999999999874 68877754322221100 0 1113333345666776 69
Q ss_pred CEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEE
Q 019795 83 EAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLV 128 (335)
Q Consensus 83 d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v 128 (335)
|+||.++.... ...++..|.+.|+ ++|
T Consensus 62 DvVid~t~p~~------------------~~~~~~~al~~G~-~vv 88 (257)
T PRK00048 62 DVLIDFTTPEA------------------TLENLEFALEHGK-PLV 88 (257)
T ss_pred CEEEECCCHHH------------------HHHHHHHHHHcCC-CEE
Confidence 99998764311 1246667777774 555
|
|
| >PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ] | Back alignment and domain information |
|---|
Probab=96.84 E-value=0.0051 Score=47.14 Aligned_cols=97 Identities=24% Similarity=0.331 Sum_probs=55.1
Q ss_pred CeEEEEcCCChhhHHHHHHHHh-CCCeEEE-EecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCC
Q 019795 5 KNILVTGGAGFIGTHCALQLLQ-GGFKVVL-IDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKF 82 (335)
Q Consensus 5 ~~vlItGatG~iG~~l~~~L~~-~g~~V~~-~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~ 82 (335)
++|.|.|++|-+|+.+++.+.+ .+.++++ ++|.++... -+.+.+..+ .. ...+.-.+++.++++ .+
T Consensus 1 mrV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~--g~d~g~~~~------~~--~~~~~v~~~l~~~~~--~~ 68 (124)
T PF01113_consen 1 MRVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKV--GKDVGELAG------IG--PLGVPVTDDLEELLE--EA 68 (124)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTT--TSBCHHHCT------SS--T-SSBEBS-HHHHTT--H-
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccc--cchhhhhhC------cC--CcccccchhHHHhcc--cC
Confidence 5899999999999999999999 5888665 455442111 011111111 00 111111256778887 48
Q ss_pred CEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEecc
Q 019795 83 EAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSS 132 (335)
Q Consensus 83 d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss 132 (335)
|+||.+... .++...++.|.+.++ .+|.-+|
T Consensus 69 DVvIDfT~p------------------~~~~~~~~~~~~~g~-~~ViGTT 99 (124)
T PF01113_consen 69 DVVIDFTNP------------------DAVYDNLEYALKHGV-PLVIGTT 99 (124)
T ss_dssp SEEEEES-H------------------HHHHHHHHHHHHHT--EEEEE-S
T ss_pred CEEEEcCCh------------------HHhHHHHHHHHhCCC-CEEEECC
Confidence 999986422 233457777877774 5555444
|
In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A .... |
| >PRK09288 purT phosphoribosylglycinamide formyltransferase 2; Validated | Back alignment and domain information |
|---|
Probab=96.84 E-value=0.0073 Score=56.17 Aligned_cols=72 Identities=22% Similarity=0.359 Sum_probs=55.5
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCC
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKF 82 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~ 82 (335)
+.|+|+|+|+ |.+|+.+++.+.+.|++|++++..+....... . + .++..|..|.+.+.+++++.++
T Consensus 11 ~~~~ilIiG~-g~~~~~~~~a~~~~G~~v~~~~~~~~~~~~~~---a--------d--~~~~~~~~d~~~l~~~~~~~~i 76 (395)
T PRK09288 11 SATRVMLLGS-GELGKEVAIEAQRLGVEVIAVDRYANAPAMQV---A--------H--RSHVIDMLDGDALRAVIEREKP 76 (395)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCCchHHh---h--------h--heEECCCCCHHHHHHHHHHhCC
Confidence 4578999997 79999999999999999999988654322211 0 1 2466788899999999888889
Q ss_pred CEEEEc
Q 019795 83 EAVIHF 88 (335)
Q Consensus 83 d~vi~~ 88 (335)
|.|+-.
T Consensus 77 d~vi~~ 82 (395)
T PRK09288 77 DYIVPE 82 (395)
T ss_pred CEEEEe
Confidence 999854
|
|
| >PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated | Back alignment and domain information |
|---|
Probab=96.83 E-value=0.015 Score=53.96 Aligned_cols=111 Identities=18% Similarity=0.217 Sum_probs=67.8
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCC-------------------chhhHHhhhhhcCCccccceeE
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGF-KVVLIDNLHNS-------------------VPEAVDRVKDLAGPELAKKLEF 62 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~-------------------~~~~~~~~~~~~~~~~~~~i~~ 62 (335)
+..+|+|.|+ |.+|+++++.|+..|. +++++|.+.-. ...+.+.+.++- ..-++..
T Consensus 41 ~~~~VlviG~-GGlGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~n---p~v~i~~ 116 (392)
T PRK07878 41 KNARVLVIGA-GGLGSPTLLYLAAAGVGTLGIVEFDVVDESNLQRQVIHGQSDVGRSKAQSARDSIVEIN---PLVNVRL 116 (392)
T ss_pred hcCCEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCEecCcccccccccChhcCCChHHHHHHHHHHHhC---CCcEEEE
Confidence 5678999997 9999999999999985 46666544221 111122222221 1134555
Q ss_pred EEccCCCHHHHHHHHhcCCCCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccCC
Q 019795 63 HVGDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQ 138 (335)
Q Consensus 63 ~~~Dl~d~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~ 138 (335)
+...++. +...++++ ++|+||.+... ...-..+-++|.+.++ .+|+.++...+|.
T Consensus 117 ~~~~i~~-~~~~~~~~--~~D~Vvd~~d~-----------------~~~r~~ln~~~~~~~~-p~v~~~~~g~~G~ 171 (392)
T PRK07878 117 HEFRLDP-SNAVELFS--QYDLILDGTDN-----------------FATRYLVNDAAVLAGK-PYVWGSIYRFEGQ 171 (392)
T ss_pred EeccCCh-hHHHHHHh--cCCEEEECCCC-----------------HHHHHHHHHHHHHcCC-CEEEEEeccCEEE
Confidence 5555543 45667777 78999976432 1122235566777764 6888777666654
|
|
| >cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase | Back alignment and domain information |
|---|
Probab=96.81 E-value=0.006 Score=49.33 Aligned_cols=36 Identities=22% Similarity=0.330 Sum_probs=31.8
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecC
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNL 37 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~ 37 (335)
+.+|+|+|.|+++.+|..+++.|.++|.+|+++.|.
T Consensus 42 l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~ 77 (168)
T cd01080 42 LAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSK 77 (168)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECC
Confidence 467999999997778999999999999998888763
|
NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a |
| >TIGR01763 MalateDH_bact malate dehydrogenase, NAD-dependent | Back alignment and domain information |
|---|
Probab=96.80 E-value=0.014 Score=52.09 Aligned_cols=116 Identities=15% Similarity=0.138 Sum_probs=71.6
Q ss_pred CeEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCCC
Q 019795 5 KNILVTGGAGFIGTHCALQLLQGGF-KVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKFE 83 (335)
Q Consensus 5 ~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~d 83 (335)
|+|.|.|+ |.+|..++..|+..|+ +|+++++.+.........+.+... .......+.-..++.+ +. ..|
T Consensus 2 ~KV~VIGa-G~vG~~iA~~la~~g~~~VvlvDi~~~l~~g~a~d~~~~~~------~~~~~~~i~~t~d~~~-~~--~aD 71 (305)
T TIGR01763 2 KKISVIGA-GFVGATTAFRLAEKELADLVLLDVVEGIPQGKALDMYEASP------VGGFDTKVTGTNNYAD-TA--NSD 71 (305)
T ss_pred CEEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCCChhHHHHHhhhhhhh------ccCCCcEEEecCCHHH-hC--CCC
Confidence 47999997 9999999999999876 899999865432211111111110 0000111211122333 34 689
Q ss_pred EEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCC-EEEEecc
Q 019795 84 AVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCK-KLVFSSS 132 (335)
Q Consensus 84 ~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~-~~v~~Ss 132 (335)
+||-+++.+... .+.-...+..|+.....+++.+.+...+ .+|.+|.
T Consensus 72 iVIitag~p~~~--~~sR~~l~~~N~~iv~~i~~~I~~~~p~~~iIv~tN 119 (305)
T TIGR01763 72 IVVITAGLPRKP--GMSREDLLSMNAGIVREVTGRIMEHSPNPIIVVVSN 119 (305)
T ss_pred EEEEcCCCCCCc--CCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 999999975321 2334467888999999999988877533 4555554
|
The annotation of Botryococcus braunii as lactate dehydrogenase appears top be in error. This was initially annotated as MDH by Swiss-Prot and then changed. The rationale for either of these annotations is not traceable. |
| >COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only] | Back alignment and domain information |
|---|
Probab=96.80 E-value=0.0073 Score=54.55 Aligned_cols=80 Identities=18% Similarity=0.240 Sum_probs=48.4
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCC
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKF 82 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~ 82 (335)
.+.+|||+||+|.+|+.+++.+...|+.++++..++.+.. .+.+.... .-+.+..-| -.+.++++....++
T Consensus 142 ~g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~----~~~~lGAd---~vi~y~~~~--~~~~v~~~t~g~gv 212 (326)
T COG0604 142 PGETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLE----LLKELGAD---HVINYREED--FVEQVRELTGGKGV 212 (326)
T ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHH----HHHhcCCC---EEEcCCccc--HHHHHHHHcCCCCc
Confidence 3678999999999999999999999966666554332222 22222110 011111112 13445555554579
Q ss_pred CEEEEcccc
Q 019795 83 EAVIHFGAL 91 (335)
Q Consensus 83 d~vi~~a~~ 91 (335)
|+|+..-+-
T Consensus 213 Dvv~D~vG~ 221 (326)
T COG0604 213 DVVLDTVGG 221 (326)
T ss_pred eEEEECCCH
Confidence 999987654
|
|
| >cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E | Back alignment and domain information |
|---|
Probab=96.80 E-value=0.021 Score=48.78 Aligned_cols=106 Identities=20% Similarity=0.214 Sum_probs=62.9
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCC-------------------chhhHHhhhhhcCCccccceeE
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGF-KVVLIDNLHNS-------------------VPEAVDRVKDLAGPELAKKLEF 62 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~-------------------~~~~~~~~~~~~~~~~~~~i~~ 62 (335)
++++|+|.|. |.+|+++++.|++.|. ++++++...-. .+...+++.++-+ ..+++.
T Consensus 10 ~~~~VlVvG~-GGvGs~va~~Lar~GVg~i~LvD~D~V~~sNlnRq~~~~~~diG~~Kae~~~~~l~~inP---~~~V~~ 85 (231)
T cd00755 10 RNAHVAVVGL-GGVGSWAAEALARSGVGKLTLIDFDVVCVSNLNRQIHALLSTVGKPKVEVMAERIRDINP---ECEVDA 85 (231)
T ss_pred hCCCEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCEECchhhcchhCcChhhCCCcHHHHHHHHHHHHCC---CcEEEE
Confidence 5678999997 9999999999999985 67777654321 1122222222211 134444
Q ss_pred EEccCCCHHHHHHHHhcCCCCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEecc
Q 019795 63 HVGDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSS 132 (335)
Q Consensus 63 ~~~Dl~d~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss 132 (335)
+...++ ++....++. ..+|+||.+... +..-..+.+.|.+.++ .+|...+
T Consensus 86 ~~~~i~-~~~~~~l~~-~~~D~VvdaiD~-----------------~~~k~~L~~~c~~~~i-p~I~s~g 135 (231)
T cd00755 86 VEEFLT-PDNSEDLLG-GDPDFVVDAIDS-----------------IRAKVALIAYCRKRKI-PVISSMG 135 (231)
T ss_pred eeeecC-HhHHHHHhc-CCCCEEEEcCCC-----------------HHHHHHHHHHHHHhCC-CEEEEeC
Confidence 544444 345566664 258999986432 1222346678888774 4554433
|
coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown. |
| >TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form | Back alignment and domain information |
|---|
Probab=96.77 E-value=0.0071 Score=55.10 Aligned_cols=101 Identities=12% Similarity=0.077 Sum_probs=57.6
Q ss_pred CeEEEEcCCChhhHHHHHHHHhC-CCeEEEE-ecCCCCchhhHHhhhhhcCCccccceeEE-EccCCCHHHHHHHHhcCC
Q 019795 5 KNILVTGGAGFIGTHCALQLLQG-GFKVVLI-DNLHNSVPEAVDRVKDLAGPELAKKLEFH-VGDLRNKDDLDKLFSSQK 81 (335)
Q Consensus 5 ~~vlItGatG~iG~~l~~~L~~~-g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~Dl~d~~~~~~~~~~~~ 81 (335)
++|.|.||||++|..+++.|.+. +.+++.+ ++.+.......+.. +.+... ..++.+. +..++.+ +
T Consensus 1 ~kVaIiGATG~vG~ellr~L~~hP~~el~~l~~s~~sagk~~~~~~---------~~l~~~~~~~~~~~-~~~~~~~--~ 68 (346)
T TIGR01850 1 IKVAIVGASGYTGGELLRLLLNHPEVEITYLVSSRESAGKPVSEVH---------PHLRGLVDLNLEPI-DEEEIAE--D 68 (346)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCceEEEEeccchhcCCChHHhC---------ccccccCCceeecC-CHHHhhc--C
Confidence 47999999999999999999976 5777744 43322111111111 111111 1112211 2233444 6
Q ss_pred CCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEecccccc
Q 019795 82 FEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIY 136 (335)
Q Consensus 82 ~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vy 136 (335)
+|+||-+.... ....++..+.+.| .++|=.|+...+
T Consensus 69 ~DvVf~alP~~------------------~s~~~~~~~~~~G-~~VIDlS~~fR~ 104 (346)
T TIGR01850 69 ADVVFLALPHG------------------VSAELAPELLAAG-VKVIDLSADFRL 104 (346)
T ss_pred CCEEEECCCch------------------HHHHHHHHHHhCC-CEEEeCChhhhc
Confidence 89999775542 1224566666666 588888887654
|
This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons. |
| >PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.77 E-value=0.0044 Score=55.00 Aligned_cols=42 Identities=31% Similarity=0.485 Sum_probs=35.2
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhH
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAV 45 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~ 45 (335)
..++|.|.|+ |.+|+.++..|++.|++|++.++++.......
T Consensus 2 ~~~kIaViGa-G~mG~~iA~~la~~G~~V~l~d~~~~~l~~~~ 43 (287)
T PRK08293 2 DIKNVTVAGA-GVLGSQIAFQTAFHGFDVTIYDISDEALEKAK 43 (287)
T ss_pred CccEEEEECC-CHHHHHHHHHHHhcCCeEEEEeCCHHHHHHHH
Confidence 3578999997 99999999999999999999998766544443
|
|
| >PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus | Back alignment and domain information |
|---|
Probab=96.72 E-value=0.0041 Score=46.93 Aligned_cols=71 Identities=30% Similarity=0.461 Sum_probs=51.7
Q ss_pred EEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCCCEEE
Q 019795 7 ILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKFEAVI 86 (335)
Q Consensus 7 vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~d~vi 86 (335)
|+|.|. |-+|..+++.|.+.+.+|+++++++.. .+.+.. ..+.++.+|.++++.++++-- .+++.|+
T Consensus 1 vvI~G~-g~~~~~i~~~L~~~~~~vvvid~d~~~----~~~~~~-------~~~~~i~gd~~~~~~l~~a~i-~~a~~vv 67 (116)
T PF02254_consen 1 VVIIGY-GRIGREIAEQLKEGGIDVVVIDRDPER----VEELRE-------EGVEVIYGDATDPEVLERAGI-EKADAVV 67 (116)
T ss_dssp EEEES--SHHHHHHHHHHHHTTSEEEEEESSHHH----HHHHHH-------TTSEEEES-TTSHHHHHHTTG-GCESEEE
T ss_pred eEEEcC-CHHHHHHHHHHHhCCCEEEEEECCcHH----HHHHHh-------cccccccccchhhhHHhhcCc-cccCEEE
Confidence 678887 799999999999977799999886443 233322 457899999999998887532 3678777
Q ss_pred Eccc
Q 019795 87 HFGA 90 (335)
Q Consensus 87 ~~a~ 90 (335)
-+..
T Consensus 68 ~~~~ 71 (116)
T PF02254_consen 68 ILTD 71 (116)
T ss_dssp EESS
T ss_pred EccC
Confidence 6533
|
The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A .... |
| >KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only] | Back alignment and domain information |
|---|
Probab=96.72 E-value=0.0095 Score=54.13 Aligned_cols=77 Identities=22% Similarity=0.293 Sum_probs=50.3
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCC-CeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHh--c
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGG-FKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFS--S 79 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~--~ 79 (335)
+++.|||.||+|.+|+.+++-+...| .+|++.+. ..+ .+..+.+. .-...|-.+++-.+...+ .
T Consensus 157 ~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s-~e~-~~l~k~lG-----------Ad~vvdy~~~~~~e~~kk~~~ 223 (347)
T KOG1198|consen 157 KGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACS-KEK-LELVKKLG-----------ADEVVDYKDENVVELIKKYTG 223 (347)
T ss_pred CCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcc-cch-HHHHHHcC-----------CcEeecCCCHHHHHHHHhhcC
Confidence 46799999999999999999999999 55555544 332 22232221 113345556444443333 3
Q ss_pred CCCCEEEEccccc
Q 019795 80 QKFEAVIHFGALK 92 (335)
Q Consensus 80 ~~~d~vi~~a~~~ 92 (335)
.++|+|+.|.+..
T Consensus 224 ~~~DvVlD~vg~~ 236 (347)
T KOG1198|consen 224 KGVDVVLDCVGGS 236 (347)
T ss_pred CCccEEEECCCCC
Confidence 4799999998874
|
|
| >PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1 | Back alignment and domain information |
|---|
Probab=96.72 E-value=0.0088 Score=48.25 Aligned_cols=74 Identities=18% Similarity=0.258 Sum_probs=44.6
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcC--CccccceeEEEccCCCHHHHHHHHh
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAG--PELAKKLEFHVGDLRNKDDLDKLFS 78 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~i~~~~~Dl~d~~~~~~~~~ 78 (335)
|++|.+.|- |-+|+.+++.|++.|++|++.+|++.+.....+.-..... .+.-....++..=+.+.+++++++.
T Consensus 1 m~~Ig~IGl-G~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~g~~~~~s~~e~~~~~dvvi~~v~~~~~v~~v~~ 76 (163)
T PF03446_consen 1 MMKIGFIGL-GNMGSAMARNLAKAGYEVTVYDRSPEKAEALAEAGAEVADSPAEAAEQADVVILCVPDDDAVEAVLF 76 (163)
T ss_dssp -BEEEEE---SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHHHTTEEEESSHHHHHHHBSEEEE-SSSHHHHHHHHH
T ss_pred CCEEEEEch-HHHHHHHHHHHHhcCCeEEeeccchhhhhhhHHhhhhhhhhhhhHhhcccceEeecccchhhhhhhh
Confidence 679999997 9999999999999999999999875443333221100000 0000233455555666666666655
|
1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A .... |
| >COG0027 PurT Formate-dependent phosphoribosylglycinamide formyltransferase (GAR transformylase) [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.69 E-value=0.0081 Score=52.34 Aligned_cols=70 Identities=20% Similarity=0.329 Sum_probs=58.2
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCCC
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKFE 83 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~d 83 (335)
.++|++.| +|=+|+.++-.+.+.|.+|++++|......-... -..+..|+.|.+.+++++++.+||
T Consensus 12 a~kvmLLG-SGELGKEvaIe~QRLG~eViAVDrY~~APAmqVA-------------hrs~Vi~MlD~~al~avv~rekPd 77 (394)
T COG0027 12 ATKVMLLG-SGELGKEVAIEAQRLGVEVIAVDRYANAPAMQVA-------------HRSYVIDMLDGDALRAVVEREKPD 77 (394)
T ss_pred CeEEEEec-CCccchHHHHHHHhcCCEEEEecCcCCChhhhhh-------------hheeeeeccCHHHHHHHHHhhCCC
Confidence 46789998 5999999999999999999999998766433221 134677999999999999999999
Q ss_pred EEEE
Q 019795 84 AVIH 87 (335)
Q Consensus 84 ~vi~ 87 (335)
.||-
T Consensus 78 ~IVp 81 (394)
T COG0027 78 YIVP 81 (394)
T ss_pred eeee
Confidence 9985
|
|
| >TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit | Back alignment and domain information |
|---|
Probab=96.69 E-value=0.0049 Score=54.54 Aligned_cols=70 Identities=19% Similarity=0.196 Sum_probs=49.0
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCC
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQK 81 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~ 81 (335)
+.+++++|+|. |.+|+.+++.|...|++|++.+|++.... .... .+...+ +.+++.+++. +
T Consensus 149 l~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~~~----~~~~-------~g~~~~-----~~~~l~~~l~--~ 209 (287)
T TIGR02853 149 IHGSNVMVLGF-GRTGMTIARTFSALGARVFVGARSSADLA----RITE-------MGLIPF-----PLNKLEEKVA--E 209 (287)
T ss_pred CCCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHHHH----HHHH-------CCCeee-----cHHHHHHHhc--c
Confidence 35789999998 88999999999999999999998653221 1111 111211 2345666776 7
Q ss_pred CCEEEEccc
Q 019795 82 FEAVIHFGA 90 (335)
Q Consensus 82 ~d~vi~~a~ 90 (335)
.|+||++..
T Consensus 210 aDiVint~P 218 (287)
T TIGR02853 210 IDIVINTIP 218 (287)
T ss_pred CCEEEECCC
Confidence 899999753
|
This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA. |
| >PRK06019 phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed | Back alignment and domain information |
|---|
Probab=96.67 E-value=0.0094 Score=54.98 Aligned_cols=67 Identities=28% Similarity=0.377 Sum_probs=53.2
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCCC
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKFE 83 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~d 83 (335)
||+|+|.|+ |.+|+-+++.+.+.|++|++++.++....... .-..+.+|..|.+.+.++++ .+|
T Consensus 2 ~~~igilG~-Gql~~ml~~aa~~lG~~v~~~d~~~~~pa~~~-------------ad~~~~~~~~D~~~l~~~a~--~~d 65 (372)
T PRK06019 2 MKTIGIIGG-GQLGRMLALAAAPLGYKVIVLDPDPDSPAAQV-------------ADEVIVADYDDVAALRELAE--QCD 65 (372)
T ss_pred CCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCCCCchhHh-------------CceEEecCCCCHHHHHHHHh--cCC
Confidence 579999998 89999999999999999999987655432211 11356678999999999998 788
Q ss_pred EEE
Q 019795 84 AVI 86 (335)
Q Consensus 84 ~vi 86 (335)
+|.
T Consensus 66 vit 68 (372)
T PRK06019 66 VIT 68 (372)
T ss_pred EEE
Confidence 875
|
|
| >TIGR00507 aroE shikimate 5-dehydrogenase | Back alignment and domain information |
|---|
Probab=96.65 E-value=0.006 Score=53.62 Aligned_cols=43 Identities=21% Similarity=0.387 Sum_probs=35.4
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHH
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVD 46 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~ 46 (335)
++|+++|+|+ |.+|+.++..|++.|++|++++|+..+.....+
T Consensus 116 ~~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~ 158 (270)
T TIGR00507 116 PNQRVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKAEELAE 158 (270)
T ss_pred cCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 4688999998 899999999999999999999987654444333
|
This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain. |
| >PRK06130 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.64 E-value=0.0064 Score=54.59 Aligned_cols=44 Identities=30% Similarity=0.499 Sum_probs=37.1
Q ss_pred CCCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhH
Q 019795 1 MASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAV 45 (335)
Q Consensus 1 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~ 45 (335)
|-+.++|.|.|+ |.+|..++..|++.|++|+++++++.......
T Consensus 1 ~~~~~~I~vIGa-G~mG~~iA~~l~~~g~~V~~~d~~~~~~~~~~ 44 (311)
T PRK06130 1 MNPIQNLAIIGA-GTMGSGIAALFARKGLQVVLIDVMEGALERAR 44 (311)
T ss_pred CCCccEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHH
Confidence 667789999997 99999999999999999999998765544433
|
|
| >cd00300 LDH_like L-lactate dehydrogenase-like enzymes | Back alignment and domain information |
|---|
Probab=96.63 E-value=0.046 Score=48.79 Aligned_cols=113 Identities=14% Similarity=0.147 Sum_probs=77.5
Q ss_pred EEEEcCCChhhHHHHHHHHhCC--CeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCCCE
Q 019795 7 ILVTGGAGFIGTHCALQLLQGG--FKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKFEA 84 (335)
Q Consensus 7 vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~d~ 84 (335)
|.|.|+ |.+|+.++..|+..| .++++++++..........+.+..... ........ .| .. .+. +.|+
T Consensus 1 i~iiGa-G~VG~~~a~~l~~~~~~~el~l~D~~~~~~~g~~~DL~~~~~~~--~~~~i~~~--~~---~~-~l~--~aDi 69 (300)
T cd00300 1 ITIIGA-GNVGAAVAFALIAKGLASELVLVDVNEEKAKGDALDLSHASAFL--ATGTIVRG--GD---YA-DAA--DADI 69 (300)
T ss_pred CEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHhHHHhcccc--CCCeEEEC--CC---HH-HhC--CCCE
Confidence 468897 889999999999988 789999998777666666666554321 11222211 12 22 444 7899
Q ss_pred EEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCC-EEEEecc
Q 019795 85 VIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCK-KLVFSSS 132 (335)
Q Consensus 85 vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~-~~v~~Ss 132 (335)
||.+|+.+.. ..++-......|+.....+.+.+++.+.+ .++.+|.
T Consensus 70 VIitag~p~~--~~~~R~~l~~~n~~i~~~~~~~i~~~~p~~~viv~sN 116 (300)
T cd00300 70 VVITAGAPRK--PGETRLDLINRNAPILRSVITNLKKYGPDAIILVVSN 116 (300)
T ss_pred EEEcCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccC
Confidence 9999997532 23344577888999999999998887644 4555553
|
Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot |
| >TIGR01296 asd_B aspartate-semialdehyde dehydrogenase (peptidoglycan organisms) | Back alignment and domain information |
|---|
Probab=96.63 E-value=0.013 Score=53.27 Aligned_cols=68 Identities=16% Similarity=0.264 Sum_probs=42.5
Q ss_pred eEEEEcCCChhhHHHHHHHHhCCCeEE---EEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCC
Q 019795 6 NILVTGGAGFIGTHCALQLLQGGFKVV---LIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKF 82 (335)
Q Consensus 6 ~vlItGatG~iG~~l~~~L~~~g~~V~---~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~ 82 (335)
+|+|.||||++|+.|++.|.++++.++ .+.+......... + ........|+. . ..+. ++
T Consensus 1 ~VaIvGAtG~vG~eLi~lL~~~~hp~~~l~~~as~~~~g~~~~--~---------~~~~~~~~~~~-~----~~~~--~~ 62 (339)
T TIGR01296 1 NVAIVGATGAVGQEMLKILEERNFPIDKLVLLASDRSAGRKVT--F---------KGKELEVNEAK-I----ESFE--GI 62 (339)
T ss_pred CEEEEcCCCHHHHHHHHHHHhCCCChhhEEEEeccccCCCeee--e---------CCeeEEEEeCC-h----HHhc--CC
Confidence 589999999999999999999877654 3334322211110 0 12344455553 1 1234 78
Q ss_pred CEEEEcccc
Q 019795 83 EAVIHFGAL 91 (335)
Q Consensus 83 d~vi~~a~~ 91 (335)
|+||-+++.
T Consensus 63 D~v~~a~g~ 71 (339)
T TIGR01296 63 DIALFSAGG 71 (339)
T ss_pred CEEEECCCH
Confidence 999988765
|
Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. This model represents a branch more closely related to the USG-1 protein than to the other aspartate-semialdehyde dehydrogenases represented in model TIGR00978. |
| >cd08293 PTGR2 Prostaglandin reductase | Back alignment and domain information |
|---|
Probab=96.63 E-value=0.012 Score=53.59 Aligned_cols=35 Identities=26% Similarity=0.252 Sum_probs=30.8
Q ss_pred CeEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCC
Q 019795 5 KNILVTGGAGFIGTHCALQLLQGGF-KVVLIDNLHN 39 (335)
Q Consensus 5 ~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~ 39 (335)
.+|||+||+|.+|..+++.+...|+ +|+++++++.
T Consensus 156 ~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~ 191 (345)
T cd08293 156 QTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDE 191 (345)
T ss_pred CEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHH
Confidence 7999999999999999998888898 7998877543
|
Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid |
| >PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.61 E-value=0.0078 Score=53.00 Aligned_cols=35 Identities=23% Similarity=0.397 Sum_probs=31.6
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEec
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDN 36 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r 36 (335)
+++|+|+|.|++|.+|+.++..|++.|..|+++.|
T Consensus 157 l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~ 191 (283)
T PRK14192 157 LAGKHAVVVGRSAILGKPMAMMLLNANATVTICHS 191 (283)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeC
Confidence 46899999999999999999999999998887765
|
|
| >cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2 | Back alignment and domain information |
|---|
Probab=96.61 E-value=0.024 Score=50.60 Aligned_cols=109 Identities=21% Similarity=0.253 Sum_probs=66.1
Q ss_pred eEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCC-------------------chhhHHhhhhhcCCccccceeEEEc
Q 019795 6 NILVTGGAGFIGTHCALQLLQGGF-KVVLIDNLHNS-------------------VPEAVDRVKDLAGPELAKKLEFHVG 65 (335)
Q Consensus 6 ~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~-------------------~~~~~~~~~~~~~~~~~~~i~~~~~ 65 (335)
+|||.|+ |++|.++++.|+..|. +++++|.+.-. ...+.+.+.++- ..-.+..+..
T Consensus 1 kVlIVGa-GGlG~EiaKnLal~Gvg~ItIvD~D~Ve~sNLnRQflf~~~dVGk~Kaevaa~~l~~lN---p~v~V~~~~~ 76 (312)
T cd01489 1 KVLVVGA-GGIGCELLKNLVLTGFGEIHIIDLDTIDLSNLNRQFLFRKKHVGKSKAQVAKEAVLSFN---PNVKIVAYHA 76 (312)
T ss_pred CEEEECC-CHHHHHHHHHHHHhcCCeEEEEcCCCcchhhcCcCccCChhHcCcHHHHHHHHHHHHHC---CCCeEEEEec
Confidence 5899997 9999999999999984 47777654322 111122222221 1135666667
Q ss_pred cCCCHHHHHHHHhcCCCCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccCC
Q 019795 66 DLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQ 138 (335)
Q Consensus 66 Dl~d~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~ 138 (335)
++.+.....++++ ++|+||.+... ...-..+-+.|...++ .+|..++.+.+|.
T Consensus 77 ~i~~~~~~~~f~~--~~DvVv~a~Dn-----------------~~ar~~in~~c~~~~i-p~I~~gt~G~~G~ 129 (312)
T cd01489 77 NIKDPDFNVEFFK--QFDLVFNALDN-----------------LAARRHVNKMCLAADV-PLIESGTTGFLGQ 129 (312)
T ss_pred cCCCccchHHHHh--cCCEEEECCCC-----------------HHHHHHHHHHHHHCCC-CEEEEecCcceeE
Confidence 7776433446676 78999975332 2222345566777764 6777777665543
|
UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2. |
| >PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional | Back alignment and domain information |
|---|
Probab=96.60 E-value=0.012 Score=55.42 Aligned_cols=76 Identities=16% Similarity=0.165 Sum_probs=53.7
Q ss_pred CCCCeEEEEcC----------------CChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEc
Q 019795 2 ASEKNILVTGG----------------AGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVG 65 (335)
Q Consensus 2 ~~~~~vlItGa----------------tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 65 (335)
+++|+||||+| ||-+|.+|++.+..+|++|+++.-. .... .+.++.++.+
T Consensus 254 l~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~VtlI~Gp-~~~~-------------~p~~v~~i~V 319 (475)
T PRK13982 254 LAGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAEVTLISGP-VDLA-------------DPQGVKVIHV 319 (475)
T ss_pred cCCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCcEEEEeCC-cCCC-------------CCCCceEEEe
Confidence 47899999976 6899999999999999999998632 1110 1245666554
Q ss_pred cCCCHHHHHHHHhc-CCCCEEEEcccccc
Q 019795 66 DLRNKDDLDKLFSS-QKFEAVIHFGALKA 93 (335)
Q Consensus 66 Dl~d~~~~~~~~~~-~~~d~vi~~a~~~~ 93 (335)
....++.+.+.. ...|++|++|++..
T Consensus 320 --~ta~eM~~av~~~~~~Di~I~aAAVaD 346 (475)
T PRK13982 320 --ESARQMLAAVEAALPADIAIFAAAVAD 346 (475)
T ss_pred --cCHHHHHHHHHhhCCCCEEEEeccccc
Confidence 345555554432 35799999999853
|
|
| >cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase | Back alignment and domain information |
|---|
Probab=96.60 E-value=0.0096 Score=54.02 Aligned_cols=37 Identities=16% Similarity=0.183 Sum_probs=32.3
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCC
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHN 39 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 39 (335)
.+.+|+|+||+|.+|..+++.+...|.+|+++++++.
T Consensus 151 ~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~ 187 (338)
T cd08295 151 KGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDE 187 (338)
T ss_pred CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHH
Confidence 4678999999999999999988889999998877543
|
This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in |
| >PRK15116 sulfur acceptor protein CsdL; Provisional | Back alignment and domain information |
|---|
Probab=96.59 E-value=0.044 Score=47.78 Aligned_cols=109 Identities=21% Similarity=0.210 Sum_probs=64.2
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCC-CeEEEEecCCCCc-------------------hhhHHhhhhhcCCcccccee
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGG-FKVVLIDNLHNSV-------------------PEAVDRVKDLAGPELAKKLE 61 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~-------------------~~~~~~~~~~~~~~~~~~i~ 61 (335)
++..+|+|.|+ |.+|+++++.|++.| -++++++.+.-.. +...+++.++-+ ...+.
T Consensus 28 L~~s~VlVvG~-GGVGs~vae~Lar~GVg~itLiD~D~V~~sNlnRQ~~~~~~~vG~~Kve~~~~rl~~INP---~~~V~ 103 (268)
T PRK15116 28 FADAHICVVGI-GGVGSWAAEALARTGIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINP---ECRVT 103 (268)
T ss_pred hcCCCEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCCEecccccccccccChhhcChHHHHHHHHHHHhHCC---CcEEE
Confidence 35678999997 999999999999999 5688876553211 011222222211 12333
Q ss_pred EEEccCCCHHHHHHHHhcCCCCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEecccc
Q 019795 62 FHVGDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSAT 134 (335)
Q Consensus 62 ~~~~Dl~d~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~ 134 (335)
.+. +..+++...+++. .++|+||.+.... ..-..+.+.|++.++ .+|..+.++
T Consensus 104 ~i~-~~i~~e~~~~ll~-~~~D~VIdaiD~~-----------------~~k~~L~~~c~~~~i-p~I~~gGag 156 (268)
T PRK15116 104 VVD-DFITPDNVAEYMS-AGFSYVIDAIDSV-----------------RPKAALIAYCRRNKI-PLVTTGGAG 156 (268)
T ss_pred EEe-cccChhhHHHHhc-CCCCEEEEcCCCH-----------------HHHHHHHHHHHHcCC-CEEEECCcc
Confidence 332 2224555666663 2589999865431 112247778888774 565554443
|
|
| >COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.59 E-value=0.022 Score=51.02 Aligned_cols=73 Identities=18% Similarity=0.167 Sum_probs=52.1
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCC
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKF 82 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~ 82 (335)
.+++|+|+|+ |.+|...++.+...|.+|++++|++.+.+.+.+ + . .-.++ |-+|++...++.+ .+
T Consensus 166 pG~~V~I~G~-GGlGh~avQ~Aka~ga~Via~~~~~~K~e~a~~-l---G------Ad~~i--~~~~~~~~~~~~~--~~ 230 (339)
T COG1064 166 PGKWVAVVGA-GGLGHMAVQYAKAMGAEVIAITRSEEKLELAKK-L---G------ADHVI--NSSDSDALEAVKE--IA 230 (339)
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHcCCeEEEEeCChHHHHHHHH-h---C------CcEEE--EcCCchhhHHhHh--hC
Confidence 4688999999 599999999998899999999998776543332 1 1 11222 3236666666555 38
Q ss_pred CEEEEccc
Q 019795 83 EAVIHFGA 90 (335)
Q Consensus 83 d~vi~~a~ 90 (335)
|++|.+++
T Consensus 231 d~ii~tv~ 238 (339)
T COG1064 231 DAIIDTVG 238 (339)
T ss_pred cEEEECCC
Confidence 99999877
|
|
| >COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=96.58 E-value=0.023 Score=47.93 Aligned_cols=110 Identities=22% Similarity=0.285 Sum_probs=70.7
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCC-------------------chhhHHhhhhhcCCccccceeE
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGF-KVVLIDNLHNS-------------------VPEAVDRVKDLAGPELAKKLEF 62 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~-------------------~~~~~~~~~~~~~~~~~~~i~~ 62 (335)
+..+|+|.|. |++|++.+++|++.|. ++++++...-. .+-..+++..+ ++.+++
T Consensus 29 ~~~~V~VvGi-GGVGSw~veALaRsGig~itlID~D~v~vTN~NRQi~A~~~~iGk~Kv~vm~eri~~I-----nP~c~V 102 (263)
T COG1179 29 KQAHVCVVGI-GGVGSWAVEALARSGIGRITLIDMDDVCVTNTNRQIHALLGDIGKPKVEVMKERIKQI-----NPECEV 102 (263)
T ss_pred hhCcEEEEec-CchhHHHHHHHHHcCCCeEEEEecccccccccchhhHhhhhhcccHHHHHHHHHHHhh-----CCCceE
Confidence 4568999998 9999999999999984 46666544321 11122222222 244555
Q ss_pred EEc-cCCCHHHHHHHHhcCCCCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccCCC
Q 019795 63 HVG-DLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQP 139 (335)
Q Consensus 63 ~~~-Dl~d~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~ 139 (335)
... |.-+++.+.+++.. ++|.||.+.. |+..=..|+..|.+.+. -++||.+.-++.
T Consensus 103 ~~~~~f~t~en~~~~~~~-~~DyvIDaiD-----------------~v~~Kv~Li~~c~~~ki---~vIss~Gag~k~ 159 (263)
T COG1179 103 TAINDFITEENLEDLLSK-GFDYVIDAID-----------------SVRAKVALIAYCRRNKI---PVISSMGAGGKL 159 (263)
T ss_pred eehHhhhCHhHHHHHhcC-CCCEEEEchh-----------------hhHHHHHHHHHHHHcCC---CEEeeccccCCC
Confidence 444 45677888888875 7999997533 23333458888988864 455666655544
|
|
| >cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR) | Back alignment and domain information |
|---|
Probab=96.58 E-value=0.022 Score=50.78 Aligned_cols=77 Identities=19% Similarity=0.263 Sum_probs=50.5
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCH---HHHHHHHhc
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNK---DDLDKLFSS 79 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~---~~~~~~~~~ 79 (335)
++++++|+|++|.+|..+++.+...|.+|+++++++... +.+.+. ++.. ..|..+. ..+.++...
T Consensus 144 ~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~----~~~~~~-------g~~~-~~~~~~~~~~~~~~~~~~~ 211 (325)
T cd08253 144 AGETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGA----ELVRQA-------GADA-VFNYRAEDLADRILAATAG 211 (325)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHH----HHHHHc-------CCCE-EEeCCCcCHHHHHHHHcCC
Confidence 468999999999999999999999999999988754322 222111 1111 1233332 234444444
Q ss_pred CCCCEEEEcccc
Q 019795 80 QKFEAVIHFGAL 91 (335)
Q Consensus 80 ~~~d~vi~~a~~ 91 (335)
.++|.++++++.
T Consensus 212 ~~~d~vi~~~~~ 223 (325)
T cd08253 212 QGVDVIIEVLAN 223 (325)
T ss_pred CceEEEEECCch
Confidence 579999998764
|
Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts |
| >PRK07877 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=96.56 E-value=0.024 Score=56.25 Aligned_cols=105 Identities=20% Similarity=0.207 Sum_probs=67.4
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCC--eEEEEecCCCC------------------chhhHHhhhhhcCCcccccee
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGF--KVVLIDNLHNS------------------VPEAVDRVKDLAGPELAKKLE 61 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~------------------~~~~~~~~~~~~~~~~~~~i~ 61 (335)
++.++|+|.|. | +|++++.+|+..|. ++++++.+.-. ...+.+++.++- ..-+++
T Consensus 105 L~~~~V~IvG~-G-lGs~~a~~LaraGvvG~l~lvD~D~ve~sNLnRq~~~~~diG~~Kv~~a~~~l~~in---p~i~v~ 179 (722)
T PRK07877 105 LGRLRIGVVGL-S-VGHAIAHTLAAEGLCGELRLADFDTLELSNLNRVPAGVFDLGVNKAVVAARRIAELD---PYLPVE 179 (722)
T ss_pred HhcCCEEEEEe-c-HHHHHHHHHHHccCCCeEEEEcCCEEcccccccccCChhhcccHHHHHHHHHHHHHC---CCCEEE
Confidence 35678999999 7 99999999999984 67777654321 111222222221 123566
Q ss_pred EEEccCCCHHHHHHHHhcCCCCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEecc
Q 019795 62 FHVGDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSS 132 (335)
Q Consensus 62 ~~~~Dl~d~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss 132 (335)
.+...++ ++.+.++++ ++|+||.|... +..-..+-++|.+.++ .+|+.++
T Consensus 180 ~~~~~i~-~~n~~~~l~--~~DlVvD~~D~-----------------~~~R~~ln~~a~~~~i-P~i~~~~ 229 (722)
T PRK07877 180 VFTDGLT-EDNVDAFLD--GLDVVVEECDS-----------------LDVKVLLREAARARRI-PVLMATS 229 (722)
T ss_pred EEeccCC-HHHHHHHhc--CCCEEEECCCC-----------------HHHHHHHHHHHHHcCC-CEEEEcC
Confidence 6666665 677888888 78999986443 2222245567777774 5666664
|
|
| >cd01484 E1-2_like Ubiquitin activating enzyme (E1), repeat 2-like | Back alignment and domain information |
|---|
Probab=96.56 E-value=0.029 Score=47.98 Aligned_cols=109 Identities=21% Similarity=0.257 Sum_probs=66.1
Q ss_pred eEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCC-------------------chhhHHhhhhhcCCccccceeEEEc
Q 019795 6 NILVTGGAGFIGTHCALQLLQGGF-KVVLIDNLHNS-------------------VPEAVDRVKDLAGPELAKKLEFHVG 65 (335)
Q Consensus 6 ~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~-------------------~~~~~~~~~~~~~~~~~~~i~~~~~ 65 (335)
+|+|.|+ |.+|.++++.|+..|. +++++|.+.-+ ...+.+.+.++- ..-++..+..
T Consensus 1 kVlvvG~-GGlG~eilk~La~~Gvg~i~ivD~D~Ve~sNLnRQflf~~~dvGk~Ka~va~~~l~~~n---p~v~i~~~~~ 76 (234)
T cd01484 1 KVLLVGA-GGIGCELLKNLALMGFGQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKSEVAAEAVNDRN---PNCKVVPYQN 76 (234)
T ss_pred CEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEEcchhhccccCCChhhCChHHHHHHHHHHHHHC---CCCEEEEEec
Confidence 5899996 9999999999999984 46666654221 111112222221 1235666777
Q ss_pred cCCCHHHH-HHHHhcCCCCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccCC
Q 019795 66 DLRNKDDL-DKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQ 138 (335)
Q Consensus 66 Dl~d~~~~-~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~ 138 (335)
++.++.++ ..+++ ++|+||.+.. |+..-..+-+.|...++ .+|..++.+.+|.
T Consensus 77 ~i~~~~~~~~~f~~--~~DvVi~a~D-----------------n~~aR~~ln~~c~~~~i-plI~~g~~G~~G~ 130 (234)
T cd01484 77 KVGPEQDFNDTFFE--QFHIIVNALD-----------------NIIARRYVNGMLIFLIV-PLIESGTEGFKGN 130 (234)
T ss_pred cCChhhhchHHHHh--CCCEEEECCC-----------------CHHHHHHHHHHHHHcCC-CEEEEcccCCceE
Confidence 77654433 35666 7899997533 23333446666777764 6778777665553
|
E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homologou |
| >PRK07530 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.56 E-value=0.0069 Score=53.87 Aligned_cols=42 Identities=26% Similarity=0.338 Sum_probs=37.0
Q ss_pred CCCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchh
Q 019795 1 MASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPE 43 (335)
Q Consensus 1 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~ 43 (335)
||+.++|.|.|+ |.+|..++..|+++|++|++.++++.....
T Consensus 1 ~~~~~kI~vIGa-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~ 42 (292)
T PRK07530 1 MMAIKKVGVIGA-GQMGNGIAHVCALAGYDVLLNDVSADRLEA 42 (292)
T ss_pred CCCCCEEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHH
Confidence 788899999997 999999999999999999999987655433
|
|
| >KOG1494 consensus NAD-dependent malate dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=96.56 E-value=0.015 Score=49.92 Aligned_cols=117 Identities=18% Similarity=0.119 Sum_probs=71.9
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCC-CchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCC
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHN-SVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKF 82 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~ 82 (335)
+-+|.|.||.|+||+.|...|.. .+.|.-+...+- ........+.++- -.......+-++++.++++ +.
T Consensus 28 ~~KVAvlGAaGGIGQPLSLLlK~-np~Vs~LaLYDi~~~~GVaaDlSHI~-------T~s~V~g~~g~~~L~~al~--~a 97 (345)
T KOG1494|consen 28 GLKVAVLGAAGGIGQPLSLLLKL-NPLVSELALYDIANTPGVAADLSHIN-------TNSSVVGFTGADGLENALK--GA 97 (345)
T ss_pred cceEEEEecCCccCccHHHHHhc-CcccceeeeeecccCCcccccccccC-------CCCceeccCChhHHHHHhc--CC
Confidence 45799999999999999887754 343333222111 1111122222211 0111122233568999998 88
Q ss_pred CEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCE-EEEecc
Q 019795 83 EAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKK-LVFSSS 132 (335)
Q Consensus 83 d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~-~v~~Ss 132 (335)
|+|+--||++.-. --.-+.+|++|.-....|..++.++.... +.++|.
T Consensus 98 dvVvIPAGVPRKP--GMTRDDLFn~NAgIv~~l~~aia~~cP~A~i~vIsN 146 (345)
T KOG1494|consen 98 DVVVIPAGVPRKP--GMTRDDLFNINAGIVKTLAAAIAKCCPNALILVISN 146 (345)
T ss_pred CEEEecCCCCCCC--CCcHHHhhhcchHHHHHHHHHHHhhCccceeEeecC
Confidence 9999999985322 22334899999999999999988875444 444443
|
|
| >PRK12549 shikimate 5-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.56 E-value=0.0089 Score=52.87 Aligned_cols=75 Identities=19% Similarity=0.251 Sum_probs=50.2
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCC
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGF-KVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQK 81 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~ 81 (335)
..++|+|.|+ |+.|++++..|.+.|. +|++++|+..+.....+.+.+.. +.+.+... +++.+.+. .
T Consensus 126 ~~k~vlIlGa-GGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~~-----~~~~~~~~-----~~~~~~~~--~ 192 (284)
T PRK12549 126 SLERVVQLGA-GGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNARF-----PAARATAG-----SDLAAALA--A 192 (284)
T ss_pred cCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhC-----CCeEEEec-----cchHhhhC--C
Confidence 4578999998 8899999999999996 79999998665555544443221 11222211 22333444 6
Q ss_pred CCEEEEccc
Q 019795 82 FEAVIHFGA 90 (335)
Q Consensus 82 ~d~vi~~a~ 90 (335)
+|+||++..
T Consensus 193 aDiVInaTp 201 (284)
T PRK12549 193 ADGLVHATP 201 (284)
T ss_pred CCEEEECCc
Confidence 899999843
|
|
| >PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.52 E-value=0.0068 Score=53.70 Aligned_cols=45 Identities=18% Similarity=0.320 Sum_probs=37.6
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhh
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRV 48 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~ 48 (335)
.+++|.|.|+ |.+|..++..|+..|++|++.++++...+...+++
T Consensus 4 ~~~~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~~~~~~~~i 48 (286)
T PRK07819 4 AIQRVGVVGA-GQMGAGIAEVCARAGVDVLVFETTEELATAGRNRI 48 (286)
T ss_pred CccEEEEEcc-cHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHH
Confidence 3468999998 99999999999999999999999877665544443
|
|
| >PRK07411 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=96.52 E-value=0.027 Score=52.18 Aligned_cols=111 Identities=17% Similarity=0.216 Sum_probs=67.2
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCC-------------------chhhHHhhhhhcCCccccceeE
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGF-KVVLIDNLHNS-------------------VPEAVDRVKDLAGPELAKKLEF 62 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~-------------------~~~~~~~~~~~~~~~~~~~i~~ 62 (335)
+..+|+|.|+ |.+|+++++.|+..|. +++++|.+.-. ...+.+++.++- ..-++..
T Consensus 37 ~~~~VlivG~-GGlG~~va~~La~~Gvg~l~lvD~D~ve~sNL~RQ~l~~~~dvG~~Ka~~a~~~l~~~n---p~v~v~~ 112 (390)
T PRK07411 37 KAASVLCIGT-GGLGSPLLLYLAAAGIGRIGIVDFDVVDSSNLQRQVIHGTSWVGKPKIESAKNRILEIN---PYCQVDL 112 (390)
T ss_pred hcCcEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCEecccccCcCcccChHHCCCcHHHHHHHHHHHHC---CCCeEEE
Confidence 4678999997 9999999999999985 46666544221 122222332221 1234556
Q ss_pred EEccCCCHHHHHHHHhcCCCCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccCC
Q 019795 63 HVGDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQ 138 (335)
Q Consensus 63 ~~~Dl~d~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~ 138 (335)
+...++. +...++++ .+|+||.+.... ..-..+-++|.+.+ ..+|+.+....+|+
T Consensus 113 ~~~~~~~-~~~~~~~~--~~D~Vvd~~d~~-----------------~~r~~ln~~~~~~~-~p~v~~~~~g~~g~ 167 (390)
T PRK07411 113 YETRLSS-ENALDILA--PYDVVVDGTDNF-----------------PTRYLVNDACVLLN-KPNVYGSIFRFEGQ 167 (390)
T ss_pred EecccCH-HhHHHHHh--CCCEEEECCCCH-----------------HHHHHHHHHHHHcC-CCEEEEEEccCEEE
Confidence 6655554 35667777 789999864431 11123446677666 46777666555543
|
|
| >PRK08306 dipicolinate synthase subunit A; Reviewed | Back alignment and domain information |
|---|
Probab=96.51 E-value=0.0081 Score=53.46 Aligned_cols=69 Identities=20% Similarity=0.202 Sum_probs=48.7
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCC
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKF 82 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~ 82 (335)
.+++|+|+|. |.+|+.+++.|...|++|++++|++.... .... -+..++ ..+++.+.+. +.
T Consensus 151 ~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~~~----~~~~-------~G~~~~-----~~~~l~~~l~--~a 211 (296)
T PRK08306 151 HGSNVLVLGF-GRTGMTLARTLKALGANVTVGARKSAHLA----RITE-------MGLSPF-----HLSELAEEVG--KI 211 (296)
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHH----HHHH-------cCCeee-----cHHHHHHHhC--CC
Confidence 5789999997 88999999999999999999998743211 1111 122222 2245666776 78
Q ss_pred CEEEEccc
Q 019795 83 EAVIHFGA 90 (335)
Q Consensus 83 d~vi~~a~ 90 (335)
|+||++..
T Consensus 212 DiVI~t~p 219 (296)
T PRK08306 212 DIIFNTIP 219 (296)
T ss_pred CEEEECCC
Confidence 99999753
|
|
| >TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase | Back alignment and domain information |
|---|
Probab=96.49 E-value=0.016 Score=52.23 Aligned_cols=37 Identities=22% Similarity=0.262 Sum_probs=32.0
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCC
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHN 39 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 39 (335)
.+.+|||+|++|.+|..+++.+...|.+|+++++++.
T Consensus 138 ~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~ 174 (325)
T TIGR02825 138 GGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDE 174 (325)
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHH
Confidence 4578999999999999999988888999998877543
|
Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase. |
| >PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.48 E-value=0.011 Score=53.16 Aligned_cols=39 Identities=26% Similarity=0.340 Sum_probs=33.9
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchh
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPE 43 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~ 43 (335)
.++|.|.|+ |-+|+.++..|+..|++|++.++++.....
T Consensus 7 i~~VaVIGa-G~MG~giA~~~a~aG~~V~l~D~~~~~~~~ 45 (321)
T PRK07066 7 IKTFAAIGS-GVIGSGWVARALAHGLDVVAWDPAPGAEAA 45 (321)
T ss_pred CCEEEEECc-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHH
Confidence 478999997 999999999999999999999997654433
|
|
| >TIGR00518 alaDH alanine dehydrogenase | Back alignment and domain information |
|---|
Probab=96.47 E-value=0.012 Score=54.06 Aligned_cols=74 Identities=16% Similarity=0.215 Sum_probs=53.1
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCCC
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKFE 83 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~d 83 (335)
.++|+|+|+ |-+|..+++.|...|.+|++++|++..... +....+ ..+..+..+.+++.+.+. ..|
T Consensus 167 ~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~~~----l~~~~g-------~~v~~~~~~~~~l~~~l~--~aD 232 (370)
T TIGR00518 167 PGDVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRLRQ----LDAEFG-------GRIHTRYSNAYEIEDAVK--RAD 232 (370)
T ss_pred CceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHH----HHHhcC-------ceeEeccCCHHHHHHHHc--cCC
Confidence 467999988 999999999999999999999986443222 221111 123345566777888887 789
Q ss_pred EEEEcccc
Q 019795 84 AVIHFGAL 91 (335)
Q Consensus 84 ~vi~~a~~ 91 (335)
+||+++..
T Consensus 233 vVI~a~~~ 240 (370)
T TIGR00518 233 LLIGAVLI 240 (370)
T ss_pred EEEEcccc
Confidence 99998755
|
The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP. |
| >cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=96.45 E-value=0.022 Score=51.29 Aligned_cols=37 Identities=24% Similarity=0.356 Sum_probs=32.7
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCC
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHN 39 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 39 (335)
.+.+++|+|++|.+|..+++.+...|.+|+++++++.
T Consensus 162 ~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~ 198 (332)
T cd08259 162 KGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPE 198 (332)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHH
Confidence 4578999999999999999999999999999887543
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. |
| >TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain | Back alignment and domain information |
|---|
Probab=96.40 E-value=0.05 Score=45.60 Aligned_cols=70 Identities=19% Similarity=0.241 Sum_probs=49.3
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCC
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQK 81 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~ 81 (335)
+.+++|+|.|| |-+|..-++.|++.|++|++++.... .+ ...+.+. .++.++..+.... .++ +
T Consensus 7 l~gk~vlVvGg-G~va~rk~~~Ll~~ga~VtVvsp~~~--~~-l~~l~~~------~~i~~~~~~~~~~-----dl~--~ 69 (205)
T TIGR01470 7 LEGRAVLVVGG-GDVALRKARLLLKAGAQLRVIAEELE--SE-LTLLAEQ------GGITWLARCFDAD-----ILE--G 69 (205)
T ss_pred cCCCeEEEECc-CHHHHHHHHHHHHCCCEEEEEcCCCC--HH-HHHHHHc------CCEEEEeCCCCHH-----HhC--C
Confidence 46789999998 99999999999999999999975332 11 2222211 4688888776632 244 6
Q ss_pred CCEEEEc
Q 019795 82 FEAVIHF 88 (335)
Q Consensus 82 ~d~vi~~ 88 (335)
++.||-+
T Consensus 70 ~~lVi~a 76 (205)
T TIGR01470 70 AFLVIAA 76 (205)
T ss_pred cEEEEEC
Confidence 7877754
|
This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms. |
| >TIGR01915 npdG NADPH-dependent F420 reductase | Back alignment and domain information |
|---|
Probab=96.37 E-value=0.0059 Score=51.84 Aligned_cols=39 Identities=31% Similarity=0.387 Sum_probs=33.8
Q ss_pred CeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchh
Q 019795 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPE 43 (335)
Q Consensus 5 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~ 43 (335)
|+|.|+||+|.+|+.++..|.+.|++|++.+|++.+...
T Consensus 1 MkI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~~~~~~ 39 (219)
T TIGR01915 1 MKIAVLGGTGDQGKGLALRLAKAGNKIIIGSRDLEKAEE 39 (219)
T ss_pred CEEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCHHHHHH
Confidence 479999999999999999999999999999887655433
|
This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase. |
| >PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.35 E-value=0.01 Score=52.66 Aligned_cols=41 Identities=24% Similarity=0.447 Sum_probs=35.0
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhH
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAV 45 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~ 45 (335)
.++|.|.|+ |.+|+.++..|++.|++|++.++++.......
T Consensus 1 ~~~V~VIG~-G~mG~~iA~~la~~G~~V~~~d~~~~~~~~~~ 41 (288)
T PRK09260 1 IEKLVVVGA-GVMGRGIAYVFAVSGFQTTLVDIKQEQLESAQ 41 (288)
T ss_pred CcEEEEECc-cHHHHHHHHHHHhCCCcEEEEeCCHHHHHHHH
Confidence 368999998 99999999999999999999999866554443
|
|
| >PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ] | Back alignment and domain information |
|---|
Probab=96.33 E-value=0.0018 Score=53.39 Aligned_cols=34 Identities=29% Similarity=0.408 Sum_probs=27.0
Q ss_pred CeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCC
Q 019795 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHN 39 (335)
Q Consensus 5 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 39 (335)
|+|.|.|. |++|..++..|++.|++|++++.++.
T Consensus 1 M~I~ViGl-GyvGl~~A~~lA~~G~~V~g~D~~~~ 34 (185)
T PF03721_consen 1 MKIAVIGL-GYVGLPLAAALAEKGHQVIGVDIDEE 34 (185)
T ss_dssp -EEEEE---STTHHHHHHHHHHTTSEEEEE-S-HH
T ss_pred CEEEEECC-CcchHHHHHHHHhCCCEEEEEeCChH
Confidence 68889975 99999999999999999999988644
|
The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D .... |
| >COG2130 Putative NADP-dependent oxidoreductases [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.32 E-value=0.023 Score=49.54 Aligned_cols=104 Identities=13% Similarity=0.209 Sum_probs=64.0
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
..+.+|+|+||+|-+|+-+.+-..-+|++|+++.-++.+.....+.+.- ...+ |-..+ ++.+.+.+
T Consensus 149 k~GetvvVSaAaGaVGsvvgQiAKlkG~rVVGiaGg~eK~~~l~~~lGf------D~~i-----dyk~~-d~~~~L~~a~ 216 (340)
T COG2130 149 KAGETVVVSAAAGAVGSVVGQIAKLKGCRVVGIAGGAEKCDFLTEELGF------DAGI-----DYKAE-DFAQALKEAC 216 (340)
T ss_pred CCCCEEEEEecccccchHHHHHHHhhCCeEEEecCCHHHHHHHHHhcCC------ceee-----ecCcc-cHHHHHHHHC
Confidence 3568999999999999987776666799999998765544333322210 0112 22222 23333332
Q ss_pred -CCCCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHc-C-CCEEEEeccccccCCC
Q 019795 80 -QKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKY-N-CKKLVFSSSATIYGQP 139 (335)
Q Consensus 80 -~~~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~-~-~~~~v~~Ss~~vyg~~ 139 (335)
.++|+.|-|.|-. +++++... . -.|++.++-.+.|..+
T Consensus 217 P~GIDvyfeNVGg~----------------------v~DAv~~~ln~~aRi~~CG~IS~YN~~ 257 (340)
T COG2130 217 PKGIDVYFENVGGE----------------------VLDAVLPLLNLFARIPVCGAISQYNAP 257 (340)
T ss_pred CCCeEEEEEcCCch----------------------HHHHHHHhhccccceeeeeehhhcCCC
Confidence 3889999876642 33333221 1 2489999999888654
|
|
| >cd01339 LDH-like_MDH L-lactate dehydrogenase-like malate dehydrogenase proteins | Back alignment and domain information |
|---|
Probab=96.31 E-value=0.033 Score=49.76 Aligned_cols=114 Identities=14% Similarity=0.144 Sum_probs=68.8
Q ss_pred EEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCCCEE
Q 019795 7 ILVTGGAGFIGTHCALQLLQGGF-KVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKFEAV 85 (335)
Q Consensus 7 vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~d~v 85 (335)
|.|.|+ |.+|+.++..|+..|. +|+++++++.......-.+.+.... ......+.. . .| ..+ ++ +.|+|
T Consensus 1 I~IIGa-G~vG~~ia~~la~~~l~eV~L~Di~e~~~~g~~~dl~~~~~~-~~~~~~I~~-t-~d---~~~-l~--dADiV 70 (300)
T cd01339 1 ISIIGA-GNVGATLAQLLALKELGDVVLLDIVEGLPQGKALDISQAAPI-LGSDTKVTG-T-ND---YED-IA--GSDVV 70 (300)
T ss_pred CEEECC-CHHHHHHHHHHHhCCCcEEEEEeCCCcHHHHHHHHHHHhhhh-cCCCeEEEE-c-CC---HHH-hC--CCCEE
Confidence 468998 9999999999998875 9999999865432222222221110 001112111 0 12 233 44 78999
Q ss_pred EEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCC-EEEEecc
Q 019795 86 IHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCK-KLVFSSS 132 (335)
Q Consensus 86 i~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~-~~v~~Ss 132 (335)
|.+++.+... .+.-.+....|+.....+++.+.+...+ .+|.+|.
T Consensus 71 Iit~g~p~~~--~~~r~e~~~~n~~i~~~i~~~i~~~~p~~~iIv~sN 116 (300)
T cd01339 71 VITAGIPRKP--GMSRDDLLGTNAKIVKEVAENIKKYAPNAIVIVVTN 116 (300)
T ss_pred EEecCCCCCc--CCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 9999875322 2333356667888888888888877544 4445443
|
Members of this subfamily have an LDH-like structure and an MDH enzymatic activity. Some members, like MJ0490 from Methanococcus jannaschii, exhibit both MDH and LDH activities. Tetrameric MDHs, including those from phototrophic bacteria, are more similar to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenas |
| >PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.31 E-value=0.018 Score=50.56 Aligned_cols=57 Identities=18% Similarity=0.271 Sum_probs=46.0
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCC
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQK 81 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~ 81 (335)
+.+|+|+|+|+++.+|+.++..|.++|..|+++.+.. .++.+.+. .
T Consensus 156 l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t--------------------------------~~l~~~~~--~ 201 (286)
T PRK14175 156 LEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRS--------------------------------KDMASYLK--D 201 (286)
T ss_pred CCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCc--------------------------------hhHHHHHh--h
Confidence 4689999999999999999999999999999886521 13455666 6
Q ss_pred CCEEEEccccc
Q 019795 82 FEAVIHFGALK 92 (335)
Q Consensus 82 ~d~vi~~a~~~ 92 (335)
.|+||.+.+..
T Consensus 202 ADIVIsAvg~p 212 (286)
T PRK14175 202 ADVIVSAVGKP 212 (286)
T ss_pred CCEEEECCCCC
Confidence 79999887764
|
|
| >PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.31 E-value=0.027 Score=52.65 Aligned_cols=39 Identities=28% Similarity=0.299 Sum_probs=34.0
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCc
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSV 41 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~ 41 (335)
|++|+|.|.|. |++|..++..|++.|++|+++++++...
T Consensus 1 m~~~kI~VIGl-G~~G~~~A~~La~~G~~V~~~D~~~~~v 39 (415)
T PRK11064 1 MSFETISVIGL-GYIGLPTAAAFASRQKQVIGVDINQHAV 39 (415)
T ss_pred CCccEEEEECc-chhhHHHHHHHHhCCCEEEEEeCCHHHH
Confidence 45688999986 9999999999999999999999875543
|
|
| >cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=96.27 E-value=0.031 Score=50.31 Aligned_cols=77 Identities=19% Similarity=0.246 Sum_probs=50.7
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHH---HHHhc
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLD---KLFSS 79 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~---~~~~~ 79 (335)
.+.+++|+|+++.+|..+++.+...|++|+++++++.... .+... ... ...|..+.+... +....
T Consensus 166 ~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~----~~~~~-------~~~-~~~~~~~~~~~~~~~~~~~~ 233 (342)
T cd08266 166 PGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLE----RAKEL-------GAD-YVIDYRKEDFVREVRELTGK 233 (342)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHH----HHHHc-------CCC-eEEecCChHHHHHHHHHhCC
Confidence 4678999999999999999999999999998877543222 12111 111 123444443333 33333
Q ss_pred CCCCEEEEcccc
Q 019795 80 QKFEAVIHFGAL 91 (335)
Q Consensus 80 ~~~d~vi~~a~~ 91 (335)
.++|.++++++.
T Consensus 234 ~~~d~~i~~~g~ 245 (342)
T cd08266 234 RGVDVVVEHVGA 245 (342)
T ss_pred CCCcEEEECCcH
Confidence 478999998774
|
This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone |
| >PRK12749 quinate/shikimate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.27 E-value=0.023 Score=50.26 Aligned_cols=36 Identities=19% Similarity=0.261 Sum_probs=30.5
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCC
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGF-KVVLIDNLHN 39 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~ 39 (335)
++|+++|.|+ |+.+++++..|...|. +|++++|+..
T Consensus 123 ~~k~vlvlGa-GGaarAi~~~l~~~g~~~i~i~nRt~~ 159 (288)
T PRK12749 123 KGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDE 159 (288)
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCcc
Confidence 5689999998 6669999999999885 7999999753
|
|
| >PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt | Back alignment and domain information |
|---|
Probab=96.26 E-value=0.064 Score=46.34 Aligned_cols=99 Identities=24% Similarity=0.280 Sum_probs=68.1
Q ss_pred CeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCCCE
Q 019795 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKFEA 84 (335)
Q Consensus 5 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~d~ 84 (335)
|+|||.|||+ =|+.|++.|.++|+ |.+..-..-. ..+.. .....+..+.+-+.+.+.+.+++++.+++.
T Consensus 1 m~ILvlgGTt-E~r~la~~L~~~g~-v~~sv~t~~g-----~~~~~----~~~~~~~v~~G~lg~~~~l~~~l~~~~i~~ 69 (249)
T PF02571_consen 1 MKILVLGGTT-EGRKLAERLAEAGY-VIVSVATSYG-----GELLK----PELPGLEVRVGRLGDEEGLAEFLRENGIDA 69 (249)
T ss_pred CEEEEEechH-HHHHHHHHHHhcCC-EEEEEEhhhh-----Hhhhc----cccCCceEEECCCCCHHHHHHHHHhCCCcE
Confidence 6899999964 79999999999998 5443221111 11110 001356777788879999999999999999
Q ss_pred EEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEE
Q 019795 85 VIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVF 129 (335)
Q Consensus 85 vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~ 129 (335)
||.+.-+.. ...+.++.++|++.++..+=|
T Consensus 70 vIDATHPfA---------------~~is~na~~a~~~~~ipylR~ 99 (249)
T PF02571_consen 70 VIDATHPFA---------------AEISQNAIEACRELGIPYLRF 99 (249)
T ss_pred EEECCCchH---------------HHHHHHHHHHHhhcCcceEEE
Confidence 998644321 233567888999998765433
|
Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process |
| >TIGR01142 purT phosphoribosylglycinamide formyltransferase 2 | Back alignment and domain information |
|---|
Probab=96.26 E-value=0.021 Score=52.80 Aligned_cols=70 Identities=20% Similarity=0.292 Sum_probs=54.5
Q ss_pred eEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCCCEE
Q 019795 6 NILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKFEAV 85 (335)
Q Consensus 6 ~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~d~v 85 (335)
+|+|+|+ |..|..+++.+.+.|++|++++.++....... . + ..+..|..|.+.+.+++++.++|+|
T Consensus 1 kililG~-g~~~~~l~~aa~~~G~~v~~~d~~~~~~~~~~---a--------d--~~~~~~~~d~~~l~~~~~~~~id~v 66 (380)
T TIGR01142 1 RVLLLGS-GELGKEVAIEAQRLGVEVIAVDRYANAPAMQV---A--------H--RSYVINMLDGDALRAVIEREKPDYI 66 (380)
T ss_pred CEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCCCCchhhh---C--------c--eEEEcCCCCHHHHHHHHHHhCCCEE
Confidence 5899996 99999999999999999999988754432211 0 1 3456788899999999987789999
Q ss_pred EEcc
Q 019795 86 IHFG 89 (335)
Q Consensus 86 i~~a 89 (335)
+-..
T Consensus 67 ~~~~ 70 (380)
T TIGR01142 67 VPEI 70 (380)
T ss_pred Eecc
Confidence 8643
|
This enzyme is an alternative to PurN (TIGR00639) |
| >PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3 | Back alignment and domain information |
|---|
Probab=96.26 E-value=0.016 Score=46.17 Aligned_cols=70 Identities=20% Similarity=0.199 Sum_probs=43.7
Q ss_pred CCCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcC
Q 019795 1 MASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQ 80 (335)
Q Consensus 1 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~ 80 (335)
|+.+|+++|.|- |.+|+.+++.|...|.+|++...++-...++. . .+.+.. .+.+++.
T Consensus 20 ~l~Gk~vvV~GY-G~vG~g~A~~lr~~Ga~V~V~e~DPi~alqA~------~-----dGf~v~--------~~~~a~~-- 77 (162)
T PF00670_consen 20 MLAGKRVVVIGY-GKVGKGIARALRGLGARVTVTEIDPIRALQAA------M-----DGFEVM--------TLEEALR-- 77 (162)
T ss_dssp --TTSEEEEE---SHHHHHHHHHHHHTT-EEEEE-SSHHHHHHHH------H-----TT-EEE---------HHHHTT--
T ss_pred eeCCCEEEEeCC-CcccHHHHHHHhhCCCEEEEEECChHHHHHhh------h-----cCcEec--------CHHHHHh--
Confidence 578899999997 99999999999999999999987543221111 1 333332 2556666
Q ss_pred CCCEEEEccccc
Q 019795 81 KFEAVIHFGALK 92 (335)
Q Consensus 81 ~~d~vi~~a~~~ 92 (335)
..|++|.+.|..
T Consensus 78 ~adi~vtaTG~~ 89 (162)
T PF00670_consen 78 DADIFVTATGNK 89 (162)
T ss_dssp T-SEEEE-SSSS
T ss_pred hCCEEEECCCCc
Confidence 679999877753
|
3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C .... |
| >PRK08040 putative semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.24 E-value=0.02 Score=51.65 Aligned_cols=36 Identities=19% Similarity=0.219 Sum_probs=29.5
Q ss_pred CCCCCeEEEEcCCChhhHHHHHHHHhCC---CeEEEEec
Q 019795 1 MASEKNILVTGGAGFIGTHCALQLLQGG---FKVVLIDN 36 (335)
Q Consensus 1 ~~~~~~vlItGatG~iG~~l~~~L~~~g---~~V~~~~r 36 (335)
|++.++|.|.||||++|..|++.|.++. .++..+..
T Consensus 1 ~~~~~~vaIvGATG~vG~ellrlL~~~~hP~~~l~~laS 39 (336)
T PRK08040 1 MSEGWNIALLGATGAVGEALLELLAERQFPVGELYALAS 39 (336)
T ss_pred CCCCCEEEEEccCCHHHHHHHHHHhcCCCCceEEEEEEc
Confidence 7788899999999999999999999853 45555543
|
|
| >TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type | Back alignment and domain information |
|---|
Probab=96.21 E-value=0.016 Score=51.22 Aligned_cols=77 Identities=14% Similarity=0.056 Sum_probs=49.7
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCC
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGF-KVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQK 81 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~ 81 (335)
++++|+|.|+ |..|+.++..|.+.|+ +|++++|+..+.....+.+.. ...... +...+++...+. .
T Consensus 124 ~~k~vlvlGa-GGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~--------~~~~~~--~~~~~~~~~~~~--~ 190 (282)
T TIGR01809 124 AGFRGLVIGA-GGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQ--------VGVITR--LEGDSGGLAIEK--A 190 (282)
T ss_pred CCceEEEEcC-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhh--------cCccee--ccchhhhhhccc--C
Confidence 5689999997 9999999999999996 699999976544443333211 111111 111123334444 6
Q ss_pred CCEEEEccccc
Q 019795 82 FEAVIHFGALK 92 (335)
Q Consensus 82 ~d~vi~~a~~~ 92 (335)
+|+|||+....
T Consensus 191 ~DiVInaTp~g 201 (282)
T TIGR01809 191 AEVLVSTVPAD 201 (282)
T ss_pred CCEEEECCCCC
Confidence 89999986653
|
This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway. |
| >PRK07531 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase; Validated | Back alignment and domain information |
|---|
Probab=96.19 E-value=0.017 Score=55.36 Aligned_cols=40 Identities=28% Similarity=0.397 Sum_probs=35.2
Q ss_pred CCCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCc
Q 019795 1 MASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSV 41 (335)
Q Consensus 1 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~ 41 (335)
|++.|+|.|.|+ |.+|+.++..|++.|++|++.++++...
T Consensus 1 ~~~i~kIavIG~-G~MG~~iA~~la~~G~~V~v~D~~~~~~ 40 (495)
T PRK07531 1 MTMIMKAACIGG-GVIGGGWAARFLLAGIDVAVFDPHPEAE 40 (495)
T ss_pred CCCcCEEEEECc-CHHHHHHHHHHHhCCCeEEEEeCCHHHH
Confidence 667788999986 9999999999999999999999976554
|
|
| >PRK14027 quinate/shikimate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.17 E-value=0.018 Score=50.83 Aligned_cols=78 Identities=15% Similarity=0.280 Sum_probs=49.4
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCC
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGF-KVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQK 81 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~ 81 (335)
++|+++|.|+ |+.|++++..|.+.|+ ++++++|+..+.....+.+....+ ... ....+ ...+...+. .
T Consensus 126 ~~k~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~~~~~~----~~~-~~~~~---~~~~~~~~~--~ 194 (283)
T PRK14027 126 KLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVG----REA-VVGVD---ARGIEDVIA--A 194 (283)
T ss_pred CCCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhccC----cce-EEecC---HhHHHHHHh--h
Confidence 4678999998 9999999999999986 688898876555444443322111 111 11122 222333344 5
Q ss_pred CCEEEEcccc
Q 019795 82 FEAVIHFGAL 91 (335)
Q Consensus 82 ~d~vi~~a~~ 91 (335)
+|+|||+...
T Consensus 195 ~divINaTp~ 204 (283)
T PRK14027 195 ADGVVNATPM 204 (283)
T ss_pred cCEEEEcCCC
Confidence 8999998654
|
|
| >KOG0172 consensus Lysine-ketoglutarate reductase/saccharopine dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.15 E-value=0.009 Score=53.68 Aligned_cols=75 Identities=19% Similarity=0.251 Sum_probs=58.2
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCC-CeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHH-HHHHHHhcC
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGG-FKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKD-DLDKLFSSQ 80 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~-~~~~~~~~~ 80 (335)
++++||+.|+ ||+.+.++..|++++ .+|++.+|.....++..+. .+++.+..|+.+++ .+++.++
T Consensus 1 ~~~~vlllgs-g~v~~p~~d~ls~~~dv~vtva~~~~~~~~~~~~~----------~~~~av~ldv~~~~~~L~~~v~-- 67 (445)
T KOG0172|consen 1 TKKGVLLLGS-GFVSRPVADFLSRKKDVNVTVASRTLKDAEALVKG----------INIKAVSLDVADEELALRKEVK-- 67 (445)
T ss_pred CCcceEEecC-ccccchHHHHHhhcCCceEEEehhhHHHHHHHhcC----------CCccceEEEccchHHHHHhhhc--
Confidence 4689999996 999999999999985 7788888765544333221 34888999999988 8888888
Q ss_pred CCCEEEEccc
Q 019795 81 KFEAVIHFGA 90 (335)
Q Consensus 81 ~~d~vi~~a~ 90 (335)
..|.++-+-.
T Consensus 68 ~~D~viSLlP 77 (445)
T KOG0172|consen 68 PLDLVISLLP 77 (445)
T ss_pred ccceeeeecc
Confidence 6788886544
|
|
| >PLN02383 aspartate semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=96.15 E-value=0.036 Score=50.34 Aligned_cols=28 Identities=18% Similarity=0.325 Sum_probs=24.6
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCe
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFK 30 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~ 30 (335)
+.++|.|.||||++|..|++.|.+++|.
T Consensus 6 ~~~kVaVvGAtG~vG~eLlrlL~~~~hP 33 (344)
T PLN02383 6 NGPSVAIVGVTGAVGQEFLSVLTDRDFP 33 (344)
T ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCC
Confidence 3568999999999999999999987763
|
|
| >PRK14851 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=96.14 E-value=0.069 Score=52.90 Aligned_cols=108 Identities=9% Similarity=0.150 Sum_probs=65.2
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCC-------------------chhhHHhhhhhcCCcccccee
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGF-KVVLIDNLHNS-------------------VPEAVDRVKDLAGPELAKKLE 61 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~-------------------~~~~~~~~~~~~~~~~~~~i~ 61 (335)
+++.+|+|.|. |++|+++++.|+..|. ++++++.+.-. .....+++.++- ...+++
T Consensus 41 L~~~~VlIvG~-GGlGs~va~~Lar~GVG~l~LvD~D~ve~sNLNRQ~~~~~~dvG~~Kv~v~~~~l~~in---P~~~I~ 116 (679)
T PRK14851 41 LAEAKVAIPGM-GGVGGVHLITMVRTGIGRFHIADFDQFEPVNVNRQFGARVPSFGRPKLAVMKEQALSIN---PFLEIT 116 (679)
T ss_pred HhcCeEEEECc-CHHHHHHHHHHHHhCCCeEEEEcCCEecccccccCcCcChhhCCCHHHHHHHHHHHHhC---CCCeEE
Confidence 35689999996 9999999999999985 45555433211 111222222221 124566
Q ss_pred EEEccCCCHHHHHHHHhcCCCCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEecc
Q 019795 62 FHVGDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSS 132 (335)
Q Consensus 62 ~~~~Dl~d~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss 132 (335)
.+...++ ++.+.++++ ++|+||.+..... +..-..+.+.|.+.++ .+|+.+.
T Consensus 117 ~~~~~i~-~~n~~~~l~--~~DvVid~~D~~~---------------~~~r~~l~~~c~~~~i-P~i~~g~ 168 (679)
T PRK14851 117 PFPAGIN-ADNMDAFLD--GVDVVLDGLDFFQ---------------FEIRRTLFNMAREKGI-PVITAGP 168 (679)
T ss_pred EEecCCC-hHHHHHHHh--CCCEEEECCCCCc---------------HHHHHHHHHHHHHCCC-CEEEeec
Confidence 7766775 456788888 7899997643211 1112246667777765 4555543
|
|
| >PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.13 E-value=0.018 Score=53.10 Aligned_cols=35 Identities=23% Similarity=0.489 Sum_probs=32.4
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecC
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNL 37 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~ 37 (335)
.+++|.|.||.|.+|+.+++.|.+.|+.|++.+|+
T Consensus 97 ~~~~I~IiGG~GlmG~slA~~l~~~G~~V~~~d~~ 131 (374)
T PRK11199 97 DLRPVVIVGGKGQLGRLFAKMLTLSGYQVRILEQD 131 (374)
T ss_pred ccceEEEEcCCChhhHHHHHHHHHCCCeEEEeCCC
Confidence 46889999999999999999999999999999874
|
|
| >TIGR01771 L-LDH-NAD L-lactate dehydrogenase | Back alignment and domain information |
|---|
Probab=96.12 E-value=0.12 Score=46.14 Aligned_cols=111 Identities=14% Similarity=0.162 Sum_probs=75.6
Q ss_pred EEcCCChhhHHHHHHHHhCC--CeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCCCEEE
Q 019795 9 VTGGAGFIGTHCALQLLQGG--FKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKFEAVI 86 (335)
Q Consensus 9 ItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~d~vi 86 (335)
|.|+ |.+|++++..|+..+ -+++++++...........+.+..... ...+.+. . .+ . +.++ +.|+||
T Consensus 1 iIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~-~~~~~i~-~--~~---~-~~~~--daDivV 69 (299)
T TIGR01771 1 IIGA-GNVGSSTAFALLNQGIADEIVLIDINKDKAEGEAMDLQHAASFL-PTPKKIR-S--GD---Y-SDCK--DADLVV 69 (299)
T ss_pred CCCc-CHHHHHHHHHHHhcCCCCEEEEEeCCCChhhHHHHHHHHhhccc-CCCeEEe-c--CC---H-HHHC--CCCEEE
Confidence 4576 999999999998876 479999998776666666666543211 1223222 1 22 2 2344 689999
Q ss_pred EcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCC-EEEEecc
Q 019795 87 HFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCK-KLVFSSS 132 (335)
Q Consensus 87 ~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~-~~v~~Ss 132 (335)
-+||.+.. ...+-...++.|+.....+.+.+++.+.+ .++.+|.
T Consensus 70 itag~~rk--~g~~R~dll~~N~~i~~~~~~~i~~~~p~~~vivvsN 114 (299)
T TIGR01771 70 ITAGAPQK--PGETRLELVGRNVRIMKSIVPEVVKSGFDGIFLVATN 114 (299)
T ss_pred ECCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeCC
Confidence 99998532 23344578899999999999999887644 4555554
|
This model represents the NAD-dependent L-lactate dehydrogenases from bacteria and eukaryotes. This enzyme function as as the final step in anaerobic glycolysis. Although lactate dehydrogenases have in some cases been mistaken for malate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of malate dehydrogenases. |
| >PRK14852 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=96.12 E-value=0.066 Score=54.49 Aligned_cols=112 Identities=11% Similarity=0.100 Sum_probs=66.7
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCC-------------------CchhhHHhhhhhcCCcccccee
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGF-KVVLIDNLHN-------------------SVPEAVDRVKDLAGPELAKKLE 61 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~-------------------~~~~~~~~~~~~~~~~~~~~i~ 61 (335)
+++.+|+|.|. |++|+.+++.|+..|. ++++++.+.- +.....+++.++- ..-+++
T Consensus 330 L~~srVlVvGl-GGlGs~ia~~LAraGVG~I~L~D~D~Ve~SNLNRQ~l~~~~dIG~~Kaevaa~~l~~IN---P~v~I~ 405 (989)
T PRK14852 330 LLRSRVAIAGL-GGVGGIHLMTLARTGIGNFNLADFDAYSPVNLNRQYGASIASFGRGKLDVMTERALSVN---PFLDIR 405 (989)
T ss_pred HhcCcEEEECC-cHHHHHHHHHHHHcCCCeEEEEcCCEecccccccccCCChhhCCChHHHHHHHHHHHHC---CCCeEE
Confidence 35678999996 9999999999999985 3555543321 1122222222221 113455
Q ss_pred EEEccCCCHHHHHHHHhcCCCCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEecccccc
Q 019795 62 FHVGDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIY 136 (335)
Q Consensus 62 ~~~~Dl~d~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vy 136 (335)
.+...+ +++.+.++++ ++|+||.+..... +..-..+.+.|.+.++ .+|+.++.+.+
T Consensus 406 ~~~~~I-~~en~~~fl~--~~DiVVDa~D~~~---------------~~~rr~l~~~c~~~~I-P~I~ag~~G~~ 461 (989)
T PRK14852 406 SFPEGV-AAETIDAFLK--DVDLLVDGIDFFA---------------LDIRRRLFNRALELGI-PVITAGPLGYS 461 (989)
T ss_pred EEecCC-CHHHHHHHhh--CCCEEEECCCCcc---------------HHHHHHHHHHHHHcCC-CEEEeeccccC
Confidence 555555 4566888888 8899997644311 1112245666777764 57766664433
|
|
| >PLN03154 putative allyl alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.10 E-value=0.041 Score=50.21 Aligned_cols=37 Identities=16% Similarity=0.170 Sum_probs=31.8
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCC
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHN 39 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 39 (335)
.+.+|||+|++|.+|..+++.+...|.+|+++++++.
T Consensus 158 ~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~ 194 (348)
T PLN03154 158 KGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQ 194 (348)
T ss_pred CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHH
Confidence 4678999999999999999998888999988876543
|
|
| >COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.09 E-value=0.014 Score=51.17 Aligned_cols=46 Identities=20% Similarity=0.361 Sum_probs=38.3
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCC-CeEEEEecCCCCchhhHHhhh
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGG-FKVVLIDNLHNSVPEAVDRVK 49 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~ 49 (335)
++++++|.|| |+.+++++..|++.| .+++++.|+..+..+..+.+.
T Consensus 125 ~~~~vlilGA-GGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~ 171 (283)
T COG0169 125 TGKRVLILGA-GGAARAVAFALAEAGAKRITVVNRTRERAEELADLFG 171 (283)
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhh
Confidence 3688999998 999999999999999 579999998777665555544
|
|
| >cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase | Back alignment and domain information |
|---|
Probab=96.07 E-value=0.0085 Score=50.07 Aligned_cols=37 Identities=30% Similarity=0.388 Sum_probs=32.7
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCC
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHN 39 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 39 (335)
+++|+++|+|. |-+|+++++.|.+.|++|++.++++.
T Consensus 26 l~gk~v~I~G~-G~vG~~~A~~L~~~G~~Vvv~D~~~~ 62 (200)
T cd01075 26 LEGKTVAVQGL-GKVGYKLAEHLLEEGAKLIVADINEE 62 (200)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 46789999998 79999999999999999999887643
|
Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc |
| >cd01491 Ube1_repeat1 Ubiquitin activating enzyme (E1), repeat 1 | Back alignment and domain information |
|---|
Probab=96.04 E-value=0.085 Score=46.48 Aligned_cols=107 Identities=21% Similarity=0.315 Sum_probs=63.7
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCC-------------------chhhHHhhhhhcCCccccceeE
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGF-KVVLIDNLHNS-------------------VPEAVDRVKDLAGPELAKKLEF 62 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~-------------------~~~~~~~~~~~~~~~~~~~i~~ 62 (335)
+..+|||.|+ |.+|..+++.|+..|. +++++|...-. .....+++.++- ..-++..
T Consensus 18 ~~s~VLIvG~-gGLG~EiaKnLalaGVg~itI~D~d~ve~snL~rqf~~~~~dIGk~Kaea~~~~L~eLN---p~V~V~~ 93 (286)
T cd01491 18 QKSNVLISGL-GGLGVEIAKNLILAGVKSVTLHDTKPCSWSDLSSQFYLREEDIGKNRAEASQARLAELN---PYVPVTV 93 (286)
T ss_pred hcCcEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCccchhhcccCccCChHHhCHHHHHHHHHHHHHHC---CCCEEEE
Confidence 4578999997 9999999999999995 47777654321 111222222221 1133444
Q ss_pred EEccCCCHHHHHHHHhcCCCCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccCC
Q 019795 63 HVGDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQ 138 (335)
Q Consensus 63 ~~~Dl~d~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~ 138 (335)
+..++. + +.+. ++|+||.+... ...-..+-++|++.++ .+|...+.+.+|.
T Consensus 94 ~~~~~~-~----~~l~--~fdvVV~~~~~-----------------~~~~~~in~~c~~~~i-pfI~a~~~G~~G~ 144 (286)
T cd01491 94 STGPLT-T----DELL--KFQVVVLTDAS-----------------LEDQLKINEFCHSPGI-KFISADTRGLFGS 144 (286)
T ss_pred EeccCC-H----HHHh--cCCEEEEecCC-----------------HHHHHHHHHHHHHcCC-EEEEEeccccEEE
Confidence 443322 2 3455 67888875331 1112235567887774 7888888777765
|
E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Ubiquitin-E1 is a single-chain protein with a weakly conserved two-fold repeat. This CD represents the first repeat of Ub-E1. |
| >PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.03 E-value=0.028 Score=52.27 Aligned_cols=38 Identities=26% Similarity=0.353 Sum_probs=33.9
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCC
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNS 40 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~ 40 (335)
+.+++|+|+|. |.||+.+++.|...|.+|+++++++..
T Consensus 210 l~Gk~VlViG~-G~IG~~vA~~lr~~Ga~ViV~d~dp~r 247 (425)
T PRK05476 210 IAGKVVVVAGY-GDVGKGCAQRLRGLGARVIVTEVDPIC 247 (425)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCchh
Confidence 46899999997 999999999999999999999886554
|
|
| >COG0026 PurK Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.02 E-value=0.033 Score=50.04 Aligned_cols=67 Identities=24% Similarity=0.349 Sum_probs=53.4
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCCC
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKFE 83 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~d 83 (335)
||+|.|+|| |.+|+=++..-.+.|++|++++-.+........ -..+.++.+|.+.++++.+ ++|
T Consensus 1 ~~tvgIlGG-GQLgrMm~~aa~~lG~~v~vLdp~~~~PA~~va-------------~~~i~~~~dD~~al~ela~--~~D 64 (375)
T COG0026 1 MKTVGILGG-GQLGRMMALAAARLGIKVIVLDPDADAPAAQVA-------------DRVIVAAYDDPEALRELAA--KCD 64 (375)
T ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCEEEEecCCCCCchhhcc-------------cceeecCCCCHHHHHHHHh--hCC
Confidence 579999998 999999999999999999999876655433221 2346667779999999998 788
Q ss_pred EEE
Q 019795 84 AVI 86 (335)
Q Consensus 84 ~vi 86 (335)
+|=
T Consensus 65 ViT 67 (375)
T COG0026 65 VIT 67 (375)
T ss_pred EEE
Confidence 874
|
|
| >COG2085 Predicted dinucleotide-binding enzymes [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.98 E-value=0.014 Score=48.32 Aligned_cols=38 Identities=26% Similarity=0.349 Sum_probs=30.5
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCch
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVP 42 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~ 42 (335)
||++.|.| +|-||+.|+++|.+.||+|++.+|+.++..
T Consensus 1 m~~~~i~G-tGniG~alA~~~a~ag~eV~igs~r~~~~~ 38 (211)
T COG2085 1 MMIIAIIG-TGNIGSALALRLAKAGHEVIIGSSRGPKAL 38 (211)
T ss_pred CcEEEEec-cChHHHHHHHHHHhCCCeEEEecCCChhHH
Confidence 45666665 699999999999999999999877655443
|
|
| >PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF) | Back alignment and domain information |
|---|
Probab=95.97 E-value=0.034 Score=44.47 Aligned_cols=35 Identities=26% Similarity=0.456 Sum_probs=28.2
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEec
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDN 36 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r 36 (335)
+.+|+|+|.|.+..+|+.|+..|.++|..|+....
T Consensus 34 l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~ 68 (160)
T PF02882_consen 34 LEGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHS 68 (160)
T ss_dssp TTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-T
T ss_pred CCCCEEEEECCcCCCChHHHHHHHhCCCeEEeccC
Confidence 46899999999999999999999999999887643
|
Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A .... |
| >PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins | Back alignment and domain information |
|---|
Probab=95.91 E-value=0.019 Score=44.03 Aligned_cols=31 Identities=32% Similarity=0.397 Sum_probs=27.1
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhCCCeEEEEe
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQGGFKVVLID 35 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~ 35 (335)
.++|-|.|+ |-+|.+|++.|.+.|++|..+.
T Consensus 10 ~l~I~iIGa-GrVG~~La~aL~~ag~~v~~v~ 40 (127)
T PF10727_consen 10 RLKIGIIGA-GRVGTALARALARAGHEVVGVY 40 (127)
T ss_dssp --EEEEECT-SCCCCHHHHHHHHTTSEEEEES
T ss_pred ccEEEEECC-CHHHHHHHHHHHHCCCeEEEEE
Confidence 368999998 9999999999999999998874
|
This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A. |
| >PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related | Back alignment and domain information |
|---|
Probab=95.85 E-value=0.015 Score=47.68 Aligned_cols=68 Identities=24% Similarity=0.209 Sum_probs=46.1
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCC
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQK 81 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~ 81 (335)
+.+++|.|.|. |-||+.+++.|..-|.+|++.+|+......... ..+ ...++++++. .
T Consensus 34 l~g~tvgIiG~-G~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~~~-----------~~~--------~~~~l~ell~--~ 91 (178)
T PF02826_consen 34 LRGKTVGIIGY-GRIGRAVARRLKAFGMRVIGYDRSPKPEEGADE-----------FGV--------EYVSLDELLA--Q 91 (178)
T ss_dssp STTSEEEEEST-SHHHHHHHHHHHHTT-EEEEEESSCHHHHHHHH-----------TTE--------EESSHHHHHH--H
T ss_pred cCCCEEEEEEE-cCCcCeEeeeeecCCceeEEecccCChhhhccc-----------ccc--------eeeehhhhcc--h
Confidence 46799999996 999999999999999999999987553220100 111 1124667777 6
Q ss_pred CCEEEEcccc
Q 019795 82 FEAVIHFGAL 91 (335)
Q Consensus 82 ~d~vi~~a~~ 91 (335)
.|+|+.+...
T Consensus 92 aDiv~~~~pl 101 (178)
T PF02826_consen 92 ADIVSLHLPL 101 (178)
T ss_dssp -SEEEE-SSS
T ss_pred hhhhhhhhcc
Confidence 7999876554
|
All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A .... |
| >PRK13940 glutamyl-tRNA reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.84 E-value=0.028 Score=52.38 Aligned_cols=75 Identities=16% Similarity=0.203 Sum_probs=51.4
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcC
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGF-KVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQ 80 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~ 80 (335)
+.+++|+|.|+ |.+|+.+++.|...|. ++++++|+..........+ .... ....+++.+++.
T Consensus 179 l~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~---------~~~~-----~~~~~~l~~~l~-- 241 (414)
T PRK13940 179 ISSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAF---------RNAS-----AHYLSELPQLIK-- 241 (414)
T ss_pred ccCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHh---------cCCe-----EecHHHHHHHhc--
Confidence 35789999998 9999999999999995 6888888644332222211 0111 222345666776
Q ss_pred CCCEEEEcccccc
Q 019795 81 KFEAVIHFGALKA 93 (335)
Q Consensus 81 ~~d~vi~~a~~~~ 93 (335)
..|+||++.+.+.
T Consensus 242 ~aDiVI~aT~a~~ 254 (414)
T PRK13940 242 KADIIIAAVNVLE 254 (414)
T ss_pred cCCEEEECcCCCC
Confidence 6899999877643
|
|
| >PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=95.84 E-value=0.069 Score=51.07 Aligned_cols=75 Identities=17% Similarity=0.178 Sum_probs=50.7
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchh-hHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcC
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPE-AVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQ 80 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~ 80 (335)
+.+++|+|.|+ |++|..+++.|.++|++|+++++.+..... ..+.+.+ .++.++.++-.. .. .
T Consensus 14 ~~~~~v~viG~-G~~G~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~l~~-------~gv~~~~~~~~~------~~--~ 77 (480)
T PRK01438 14 WQGLRVVVAGL-GVSGFAAADALLELGARVTVVDDGDDERHRALAAILEA-------LGATVRLGPGPT------LP--E 77 (480)
T ss_pred cCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhhhHHHHHHHHH-------cCCEEEECCCcc------cc--C
Confidence 35689999997 999999999999999999999875432211 1222322 355665543221 12 2
Q ss_pred CCCEEEEccccc
Q 019795 81 KFEAVIHFGALK 92 (335)
Q Consensus 81 ~~d~vi~~a~~~ 92 (335)
.+|.||...|+.
T Consensus 78 ~~D~Vv~s~Gi~ 89 (480)
T PRK01438 78 DTDLVVTSPGWR 89 (480)
T ss_pred CCCEEEECCCcC
Confidence 689999888874
|
|
| >PLN02545 3-hydroxybutyryl-CoA dehydrogenase | Back alignment and domain information |
|---|
Probab=95.83 E-value=0.013 Score=52.13 Aligned_cols=41 Identities=29% Similarity=0.379 Sum_probs=36.7
Q ss_pred CCCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCch
Q 019795 1 MASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVP 42 (335)
Q Consensus 1 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~ 42 (335)
|+.+++|.|.|+ |.+|..++..|+..|++|++.++++....
T Consensus 1 ~~~~~~V~vIG~-G~mG~~iA~~l~~~G~~V~~~d~~~~~~~ 41 (295)
T PLN02545 1 MAEIKKVGVVGA-GQMGSGIAQLAAAAGMDVWLLDSDPAALS 41 (295)
T ss_pred CCCcCEEEEECC-CHHHHHHHHHHHhcCCeEEEEeCCHHHHH
Confidence 788899999997 99999999999999999999998765544
|
|
| >PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional | Back alignment and domain information |
|---|
Probab=95.79 E-value=0.066 Score=52.63 Aligned_cols=71 Identities=15% Similarity=0.238 Sum_probs=54.0
Q ss_pred CeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCCCE
Q 019795 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKFEA 84 (335)
Q Consensus 5 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~d~ 84 (335)
.+|+|.|. |-+|+.+++.|.++|+++++++.++.. .+.+.+ .+...+.+|.++++-++++= -.+.|.
T Consensus 401 ~~vII~G~-Gr~G~~va~~L~~~g~~vvvID~d~~~----v~~~~~-------~g~~v~~GDat~~~~L~~ag-i~~A~~ 467 (601)
T PRK03659 401 PQVIIVGF-GRFGQVIGRLLMANKMRITVLERDISA----VNLMRK-------YGYKVYYGDATQLELLRAAG-AEKAEA 467 (601)
T ss_pred CCEEEecC-chHHHHHHHHHHhCCCCEEEEECCHHH----HHHHHh-------CCCeEEEeeCCCHHHHHhcC-CccCCE
Confidence 57899996 999999999999999999999976443 233322 45678999999998777642 236787
Q ss_pred EEEc
Q 019795 85 VIHF 88 (335)
Q Consensus 85 vi~~ 88 (335)
+|-+
T Consensus 468 vv~~ 471 (601)
T PRK03659 468 IVIT 471 (601)
T ss_pred EEEE
Confidence 7754
|
|
| >cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=95.78 E-value=0.072 Score=46.14 Aligned_cols=35 Identities=26% Similarity=0.432 Sum_probs=31.0
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCC
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLH 38 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~ 38 (335)
.+.+|+|+|+++ +|..+++.+...|.+|+++++++
T Consensus 134 ~~~~vli~g~~~-~G~~~~~~a~~~g~~v~~~~~~~ 168 (271)
T cd05188 134 PGDTVLVLGAGG-VGLLAAQLAKAAGARVIVTDRSD 168 (271)
T ss_pred CCCEEEEECCCH-HHHHHHHHHHHcCCeEEEEcCCH
Confidence 467899999998 99999999999999999998754
|
The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro |
| >PLN02494 adenosylhomocysteinase | Back alignment and domain information |
|---|
Probab=95.78 E-value=0.046 Score=51.23 Aligned_cols=39 Identities=23% Similarity=0.359 Sum_probs=34.3
Q ss_pred CCCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCC
Q 019795 1 MASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNS 40 (335)
Q Consensus 1 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~ 40 (335)
++.+|+|+|.|. |.||+.+++.+...|.+|+++++++..
T Consensus 251 ~LaGKtVvViGy-G~IGr~vA~~aka~Ga~VIV~e~dp~r 289 (477)
T PLN02494 251 MIAGKVAVICGY-GDVGKGCAAAMKAAGARVIVTEIDPIC 289 (477)
T ss_pred ccCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchh
Confidence 457899999997 999999999999999999999886544
|
|
| >PRK08655 prephenate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.77 E-value=0.024 Score=53.36 Aligned_cols=36 Identities=28% Similarity=0.424 Sum_probs=32.3
Q ss_pred CeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCC
Q 019795 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNS 40 (335)
Q Consensus 5 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~ 40 (335)
|+|.|.||+|.+|+.+++.|.+.|++|++++|++..
T Consensus 1 MkI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~ 36 (437)
T PRK08655 1 MKISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKK 36 (437)
T ss_pred CEEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHH
Confidence 479999999999999999999999999999986543
|
|
| >PRK06718 precorrin-2 dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=95.74 E-value=0.064 Score=44.89 Aligned_cols=34 Identities=32% Similarity=0.572 Sum_probs=31.3
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEec
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDN 36 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r 36 (335)
+++|+|+|.|| |-+|...++.|++.|++|+++++
T Consensus 8 l~~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~ 41 (202)
T PRK06718 8 LSNKRVVIVGG-GKVAGRRAITLLKYGAHIVVISP 41 (202)
T ss_pred cCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcC
Confidence 46799999998 99999999999999999999975
|
|
| >TIGR00978 asd_EA aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms) | Back alignment and domain information |
|---|
Probab=95.73 E-value=0.11 Score=47.37 Aligned_cols=33 Identities=18% Similarity=0.327 Sum_probs=27.5
Q ss_pred CeEEEEcCCChhhHHHHHHHHhCC-CeEEEEecC
Q 019795 5 KNILVTGGAGFIGTHCALQLLQGG-FKVVLIDNL 37 (335)
Q Consensus 5 ~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~ 37 (335)
++|.|+|+||++|++|++.|.+.. .+++.+..+
T Consensus 1 ~kVaIvGatG~~G~~L~~~l~~~~~~~l~~v~~~ 34 (341)
T TIGR00978 1 MRVAVLGATGLVGQKFVKLLAKHPYFELAKVVAS 34 (341)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCceEEEEEEC
Confidence 479999999999999999998865 687777443
|
Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. Separate models are built for the two types in order to exclude the USG-1 protein, found in several species, which is specifically related to the Bacillus subtilis type of aspartate-semialdehyde dehydrogenase. Members of this type are found primarily in organisms that lack peptidoglycan. |
| >PF00070 Pyr_redox: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR001327 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ] | Back alignment and domain information |
|---|
Probab=95.72 E-value=0.03 Score=39.11 Aligned_cols=34 Identities=38% Similarity=0.575 Sum_probs=30.5
Q ss_pred eEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCC
Q 019795 6 NILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNS 40 (335)
Q Consensus 6 ~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~ 40 (335)
+|+|.|| |++|-.++..|.+.|.+|+++.+++.-
T Consensus 1 ~vvViGg-G~ig~E~A~~l~~~g~~vtli~~~~~~ 34 (80)
T PF00070_consen 1 RVVVIGG-GFIGIELAEALAELGKEVTLIERSDRL 34 (80)
T ss_dssp EEEEESS-SHHHHHHHHHHHHTTSEEEEEESSSSS
T ss_pred CEEEECc-CHHHHHHHHHHHHhCcEEEEEeccchh
Confidence 5789997 999999999999999999999987554
|
Comparison of the crystal structures of human glutathione reductase and Escherichia coli thioredoxin reductase reveals different locations of their active sites, suggesting that the enzymes diverged from an ancestral FAD/NAD(P)H reductase and acquired their disulphide reductase activities independently []. Despite functional similarities, oxidoreductases of this family show no sequence similarity with adrenodoxin reductases [] and flavoprotein pyridine nucleotide cytochrome reductases (FPNCR) []. Assuming that disulphide reductase activity emerged later, during divergent evolution, the family can be referred to as FAD-dependent pyridine nucleotide reductases, FADPNR. To date, 3D structures of glutathione reductase [], thioredoxin reductase [], mercuric reductase [], lipoamide dehydrogenase [], trypanothione reductase [] and NADH peroxidase [] have been solved. The enzymes share similar tertiary structures based on a doubly-wound alpha/beta fold, but the relative orientations of their FAD- and NAD(P)H-binding domains may vary significantly. By contrast with the FPNCR family, the folds of the FAD- and NAD(P)H-binding domains are similar, suggesting that the domains evolved by gene duplication []. This entry describes a small NADH binding domain within a larger FAD binding domain described by IPR023753 from INTERPRO. It is found in both class I and class II oxidoreductases. ; GO: 0016491 oxidoreductase activity, 0050660 flavin adenine dinucleotide binding, 0055114 oxidation-reduction process; PDB: 1ZKQ_A 3DGZ_A 1ZDL_A 2R9Z_B 2RAB_A 2A87_B 1M6I_A 2YVG_A 2GR1_A 2GQW_A .... |
| >PRK00045 hemA glutamyl-tRNA reductase; Reviewed | Back alignment and domain information |
|---|
Probab=95.72 E-value=0.029 Score=52.70 Aligned_cols=73 Identities=23% Similarity=0.322 Sum_probs=49.9
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcC
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGF-KVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQ 80 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~ 80 (335)
+.+++|+|.|+ |.+|..+++.|...|. +|++++|+..........+ + . +..+.+++.+.+.
T Consensus 180 ~~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~----g------~-----~~~~~~~~~~~l~-- 241 (423)
T PRK00045 180 LSGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLERAEELAEEF----G------G-----EAIPLDELPEALA-- 241 (423)
T ss_pred ccCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHc----C------C-----cEeeHHHHHHHhc--
Confidence 45789999997 9999999999999997 7888888654332222211 1 1 1222345556666
Q ss_pred CCCEEEEccccc
Q 019795 81 KFEAVIHFGALK 92 (335)
Q Consensus 81 ~~d~vi~~a~~~ 92 (335)
++|+||.+.+..
T Consensus 242 ~aDvVI~aT~s~ 253 (423)
T PRK00045 242 EADIVISSTGAP 253 (423)
T ss_pred cCCEEEECCCCC
Confidence 789999987653
|
|
| >PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.71 E-value=0.13 Score=48.65 Aligned_cols=29 Identities=31% Similarity=0.389 Sum_probs=26.1
Q ss_pred EEcCCChhhHHHHHHHHhCCCeEEEEecC
Q 019795 9 VTGGAGFIGTHCALQLLQGGFKVVLIDNL 37 (335)
Q Consensus 9 ItGatG~iG~~l~~~L~~~g~~V~~~~r~ 37 (335)
|+||+|.+|.++++.|...|.+|++..+.
T Consensus 43 l~~~~~g~~~~~~~~~~~~g~~v~~~~~~ 71 (450)
T PRK08261 43 LVGGAGRLAEALAALLAGLGYDVVANNDG 71 (450)
T ss_pred EEccCchhHHHHHHHHhhCCCeeeecCcc
Confidence 88889999999999999999999987553
|
|
| >cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy) | Back alignment and domain information |
|---|
Probab=95.70 E-value=0.054 Score=50.27 Aligned_cols=39 Identities=26% Similarity=0.330 Sum_probs=34.2
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCc
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSV 41 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~ 41 (335)
+.+++|+|.|+ |.||..+++.+...|.+|+++++++...
T Consensus 200 l~GktVvViG~-G~IG~~va~~ak~~Ga~ViV~d~d~~R~ 238 (413)
T cd00401 200 IAGKVAVVAGY-GDVGKGCAQSLRGQGARVIVTEVDPICA 238 (413)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECChhhH
Confidence 46889999998 9999999999999999999998875543
|
The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+. |
| >cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases | Back alignment and domain information |
|---|
Probab=95.69 E-value=0.1 Score=46.80 Aligned_cols=37 Identities=27% Similarity=0.407 Sum_probs=32.5
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCC
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNS 40 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~ 40 (335)
+.+|+|.|++|.+|..+++.+...|.+|+++++++.+
T Consensus 147 ~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~ 183 (326)
T cd08289 147 QGPVLVTGATGGVGSLAVSILAKLGYEVVASTGKADA 183 (326)
T ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCeEEEEecCHHH
Confidence 4689999999999999999999999999998876544
|
yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH |
| >TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=95.67 E-value=0.086 Score=46.48 Aligned_cols=76 Identities=17% Similarity=0.272 Sum_probs=45.5
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCe-EEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCC-HHHHHHHHhcC
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFK-VVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRN-KDDLDKLFSSQ 80 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d-~~~~~~~~~~~ 80 (335)
.+.+|+|.|+ |.+|..+++.+...|.. |+++++++.+.. .+.+. + ... ..|..+ .+.+.++....
T Consensus 120 ~g~~VlV~G~-G~vG~~~~~~ak~~G~~~Vi~~~~~~~r~~----~a~~~-G------a~~-~i~~~~~~~~~~~~~~~~ 186 (280)
T TIGR03366 120 KGRRVLVVGA-GMLGLTAAAAAAAAGAARVVAADPSPDRRE----LALSF-G------ATA-LAEPEVLAERQGGLQNGR 186 (280)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHH----HHHHc-C------CcE-ecCchhhHHHHHHHhCCC
Confidence 3578999987 89999999988888986 777765433221 11111 1 111 112222 23344444434
Q ss_pred CCCEEEEcccc
Q 019795 81 KFEAVIHFGAL 91 (335)
Q Consensus 81 ~~d~vi~~a~~ 91 (335)
++|+||.+.+.
T Consensus 187 g~d~vid~~G~ 197 (280)
T TIGR03366 187 GVDVALEFSGA 197 (280)
T ss_pred CCCEEEECCCC
Confidence 79999998764
|
This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds. |
| >cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity | Back alignment and domain information |
|---|
Probab=95.67 E-value=0.037 Score=49.78 Aligned_cols=37 Identities=22% Similarity=0.319 Sum_probs=32.2
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCC
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHN 39 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 39 (335)
++.+|||+||+|.+|..+++.+...|.+|+++++++.
T Consensus 143 ~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~ 179 (329)
T cd08294 143 AGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDD 179 (329)
T ss_pred CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHH
Confidence 4578999999999999999999999999998876543
|
Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac |
| >cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=95.65 E-value=0.036 Score=49.75 Aligned_cols=72 Identities=22% Similarity=0.314 Sum_probs=49.4
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCC-CeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCC
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGG-FKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQK 81 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~ 81 (335)
.+++|+|.|+ |-+|..+++.|...| .+|++++|++.+.......+ + . ..+ +.+++.+.+. .
T Consensus 177 ~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~~----g----~--~~~-----~~~~~~~~l~--~ 238 (311)
T cd05213 177 KGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERAEELAKEL----G----G--NAV-----PLDELLELLN--E 238 (311)
T ss_pred cCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHc----C----C--eEE-----eHHHHHHHHh--c
Confidence 5789999997 999999999999866 67888988654433322221 1 1 122 2335666666 6
Q ss_pred CCEEEEccccc
Q 019795 82 FEAVIHFGALK 92 (335)
Q Consensus 82 ~d~vi~~a~~~ 92 (335)
.|+||.+.+..
T Consensus 239 aDvVi~at~~~ 249 (311)
T cd05213 239 ADVVISATGAP 249 (311)
T ss_pred CCEEEECCCCC
Confidence 89999987764
|
Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, |
| >TIGR01035 hemA glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=95.64 E-value=0.032 Score=52.19 Aligned_cols=73 Identities=22% Similarity=0.330 Sum_probs=50.1
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCC-CeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcC
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGG-FKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQ 80 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~ 80 (335)
+.+++|+|.|+ |.+|..+++.|...| .+|++++|+..........+ + . ..+ +.+++.+++.
T Consensus 178 l~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~----g----~--~~i-----~~~~l~~~l~-- 239 (417)
T TIGR01035 178 LKGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAEDLAKEL----G----G--EAV-----KFEDLEEYLA-- 239 (417)
T ss_pred ccCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHc----C----C--eEe-----eHHHHHHHHh--
Confidence 35689999997 999999999999999 78999988654332222211 1 1 112 2235666676
Q ss_pred CCCEEEEccccc
Q 019795 81 KFEAVIHFGALK 92 (335)
Q Consensus 81 ~~d~vi~~a~~~ 92 (335)
+.|+||.+.+..
T Consensus 240 ~aDvVi~aT~s~ 251 (417)
T TIGR01035 240 EADIVISSTGAP 251 (417)
T ss_pred hCCEEEECCCCC
Confidence 789999986653
|
This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA. |
| >COG0136 Asd Aspartate-semialdehyde dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.63 E-value=0.036 Score=49.36 Aligned_cols=26 Identities=27% Similarity=0.348 Sum_probs=23.4
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhCCC
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQGGF 29 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~g~ 29 (335)
+++|.|.||||.+|+.+++.|.++..
T Consensus 1 ~~~VavvGATG~VG~~~~~~L~e~~f 26 (334)
T COG0136 1 KLNVAVLGATGAVGQVLLELLEERHF 26 (334)
T ss_pred CcEEEEEeccchHHHHHHHHHHhcCC
Confidence 46899999999999999999999753
|
|
| >PTZ00075 Adenosylhomocysteinase; Provisional | Back alignment and domain information |
|---|
Probab=95.60 E-value=0.061 Score=50.56 Aligned_cols=39 Identities=31% Similarity=0.370 Sum_probs=34.0
Q ss_pred CCCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCC
Q 019795 1 MASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNS 40 (335)
Q Consensus 1 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~ 40 (335)
++.+|+|+|.|. |.||+.+++.|...|++|+++++++..
T Consensus 251 ~LaGKtVgVIG~-G~IGr~vA~rL~a~Ga~ViV~e~dp~~ 289 (476)
T PTZ00075 251 MIAGKTVVVCGY-GDVGKGCAQALRGFGARVVVTEIDPIC 289 (476)
T ss_pred CcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchh
Confidence 367899999997 889999999999999999998876543
|
|
| >cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like | Back alignment and domain information |
|---|
Probab=95.59 E-value=0.11 Score=47.03 Aligned_cols=76 Identities=18% Similarity=0.226 Sum_probs=48.4
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCe-EEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCC--HHHHHHHHhc
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFK-VVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRN--KDDLDKLFSS 79 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d--~~~~~~~~~~ 79 (335)
.+.+|+|+|+ |.+|..+++.+...|.+ |+++++++.+.. .+.++. .. ...|..+ .+.+.++...
T Consensus 163 ~g~~vlV~G~-G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~----~~~~~g-------a~-~~i~~~~~~~~~~~~~~~~ 229 (339)
T cd08239 163 GRDTVLVVGA-GPVGLGALMLARALGAEDVIGVDPSPERLE----LAKALG-------AD-FVINSGQDDVQEIRELTSG 229 (339)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHH----HHHHhC-------CC-EEEcCCcchHHHHHHHhCC
Confidence 4678999986 99999999999889988 888876543322 122111 11 1122222 3344455444
Q ss_pred CCCCEEEEcccc
Q 019795 80 QKFEAVIHFGAL 91 (335)
Q Consensus 80 ~~~d~vi~~a~~ 91 (335)
.++|+||.+.+.
T Consensus 230 ~~~d~vid~~g~ 241 (339)
T cd08239 230 AGADVAIECSGN 241 (339)
T ss_pred CCCCEEEECCCC
Confidence 479999998764
|
MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at |
| >KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.59 E-value=0.15 Score=44.50 Aligned_cols=105 Identities=12% Similarity=0.085 Sum_probs=63.3
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc---
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS--- 79 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~--- 79 (335)
++++|+|.||+|-+|+-+-+-..-.|+.|++.+-++.+..... ...+. + ...|--++.++.+++..
T Consensus 153 ~geTv~VSaAsGAvGql~GQ~Ak~~Gc~VVGsaGS~EKv~ll~----~~~G~---d----~afNYK~e~~~~~aL~r~~P 221 (343)
T KOG1196|consen 153 KGETVFVSAASGAVGQLVGQFAKLMGCYVVGSAGSKEKVDLLK----TKFGF---D----DAFNYKEESDLSAALKRCFP 221 (343)
T ss_pred CCCEEEEeeccchhHHHHHHHHHhcCCEEEEecCChhhhhhhH----hccCC---c----cceeccCccCHHHHHHHhCC
Confidence 4689999999999998666655556999999877655433322 21110 0 01122233344444443
Q ss_pred CCCCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccCC
Q 019795 80 QKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQ 138 (335)
Q Consensus 80 ~~~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~ 138 (335)
.++|+-|.+.|-.- ...++..++..+ |++.++-.+.|..
T Consensus 222 ~GIDiYfeNVGG~~------------------lDavl~nM~~~g--ri~~CG~ISqYN~ 260 (343)
T KOG1196|consen 222 EGIDIYFENVGGKM------------------LDAVLLNMNLHG--RIAVCGMISQYNL 260 (343)
T ss_pred CcceEEEeccCcHH------------------HHHHHHhhhhcc--ceEeeeeehhccc
Confidence 47888887655410 112444455554 8999998888854
|
|
| >cd01490 Ube1_repeat2 Ubiquitin activating enzyme (E1), repeat 2 | Back alignment and domain information |
|---|
Probab=95.59 E-value=0.15 Score=47.61 Aligned_cols=32 Identities=19% Similarity=0.346 Sum_probs=27.4
Q ss_pred eEEEEcCCChhhHHHHHHHHhCCC------eEEEEecCC
Q 019795 6 NILVTGGAGFIGTHCALQLLQGGF------KVVLIDNLH 38 (335)
Q Consensus 6 ~vlItGatG~iG~~l~~~L~~~g~------~V~~~~r~~ 38 (335)
+|+|.|+ |.+|..+++.|+..|. +++++|.+.
T Consensus 1 kVlvVGa-GGlGcE~lKnLal~Gv~~g~~G~I~IvD~D~ 38 (435)
T cd01490 1 KVFLVGA-GAIGCELLKNFALMGVGTGESGEITVTDMDN 38 (435)
T ss_pred CEEEECC-CHHHHHHHHHHHHcCCCcCCCCeEEEECCCC
Confidence 5899997 9999999999999987 788886543
|
E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Ubiquitin-E1 is a single-chain protein with a weakly conserved two-fold repeat. This CD represents the second repeat of Ub-E1. |
| >cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2 | Back alignment and domain information |
|---|
Probab=95.55 E-value=0.092 Score=47.04 Aligned_cols=77 Identities=13% Similarity=0.184 Sum_probs=50.1
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCC---HHHHHHHHhc
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRN---KDDLDKLFSS 79 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d---~~~~~~~~~~ 79 (335)
++.+|+|.|++|.+|..+++.+...|.+|+++.++...... +.+. + +..+ .+..+ ...+.++...
T Consensus 139 ~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~~----~~~~-g------~~~~-~~~~~~~~~~~i~~~~~~ 206 (324)
T cd08292 139 PGQWLIQNAAGGAVGKLVAMLAAARGINVINLVRRDAGVAE----LRAL-G------IGPV-VSTEQPGWQDKVREAAGG 206 (324)
T ss_pred CCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecCHHHHHH----HHhc-C------CCEE-EcCCCchHHHHHHHHhCC
Confidence 45789999999999999999999999999988765443222 2211 1 1111 12222 2334555544
Q ss_pred CCCCEEEEcccc
Q 019795 80 QKFEAVIHFGAL 91 (335)
Q Consensus 80 ~~~d~vi~~a~~ 91 (335)
.++|+|+.+.+.
T Consensus 207 ~~~d~v~d~~g~ 218 (324)
T cd08292 207 APISVALDSVGG 218 (324)
T ss_pred CCCcEEEECCCC
Confidence 579999987664
|
2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina |
| >PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=95.55 E-value=0.02 Score=51.62 Aligned_cols=36 Identities=31% Similarity=0.327 Sum_probs=31.5
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCC
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNS 40 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~ 40 (335)
||+|.|.|+ |.+|+.++..|++.|++|++++|++..
T Consensus 1 mmkI~iiG~-G~mG~~~a~~L~~~g~~V~~~~r~~~~ 36 (325)
T PRK00094 1 MMKIAVLGA-GSWGTALAIVLARNGHDVTLWARDPEQ 36 (325)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHH
Confidence 358999996 999999999999999999999986443
|
|
| >PRK10669 putative cation:proton antiport protein; Provisional | Back alignment and domain information |
|---|
Probab=95.54 E-value=0.023 Score=55.41 Aligned_cols=70 Identities=19% Similarity=0.338 Sum_probs=52.9
Q ss_pred CeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCCCE
Q 019795 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKFEA 84 (335)
Q Consensus 5 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~d~ 84 (335)
.+++|.|. |-+|+++++.|.++|++|++++.++.. .+++.+ .+...+.+|.+|++.++++-- .++|.
T Consensus 418 ~hiiI~G~-G~~G~~la~~L~~~g~~vvvId~d~~~----~~~~~~-------~g~~~i~GD~~~~~~L~~a~i-~~a~~ 484 (558)
T PRK10669 418 NHALLVGY-GRVGSLLGEKLLAAGIPLVVIETSRTR----VDELRE-------RGIRAVLGNAANEEIMQLAHL-DCARW 484 (558)
T ss_pred CCEEEECC-ChHHHHHHHHHHHCCCCEEEEECCHHH----HHHHHH-------CCCeEEEcCCCCHHHHHhcCc-cccCE
Confidence 46889997 999999999999999999999876443 233322 467899999999887765422 36776
Q ss_pred EEE
Q 019795 85 VIH 87 (335)
Q Consensus 85 vi~ 87 (335)
++-
T Consensus 485 viv 487 (558)
T PRK10669 485 LLL 487 (558)
T ss_pred EEE
Confidence 664
|
|
| >COG0289 DapB Dihydrodipicolinate reductase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.50 E-value=0.13 Score=44.28 Aligned_cols=37 Identities=22% Similarity=0.336 Sum_probs=29.0
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCC-CeEE-EEecCCC
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGG-FKVV-LIDNLHN 39 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g-~~V~-~~~r~~~ 39 (335)
+|++|.|.|++|-+|+.+++.+.+.. .++. +++|.+.
T Consensus 1 ~~iki~V~Ga~GRMG~~ii~~v~~~~~~~L~aa~~~~~~ 39 (266)
T COG0289 1 SMIKVAVAGASGRMGRTLIRAVLEAPDLELVAAFDRPGS 39 (266)
T ss_pred CCceEEEEcCCChHHHHHHHHHhcCCCceEEEEEecCCc
Confidence 46789999999999999999999874 5544 4555433
|
|
| >cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases | Back alignment and domain information |
|---|
Probab=95.49 E-value=0.12 Score=46.34 Aligned_cols=36 Identities=28% Similarity=0.432 Sum_probs=31.4
Q ss_pred CeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCC
Q 019795 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNS 40 (335)
Q Consensus 5 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~ 40 (335)
.+|+|.|++|.+|..+++.+...|.+|+++++++.+
T Consensus 148 ~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~ 183 (325)
T cd05280 148 GPVLVTGATGGVGSIAVAILAKLGYTVVALTGKEEQ 183 (325)
T ss_pred CEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHH
Confidence 589999999999999999888889999988876543
|
Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so |
| >cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase | Back alignment and domain information |
|---|
Probab=95.49 E-value=0.043 Score=48.82 Aligned_cols=77 Identities=14% Similarity=0.268 Sum_probs=49.6
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCH---HHHHHHHhc
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNK---DDLDKLFSS 79 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~---~~~~~~~~~ 79 (335)
++.+|+|+|++|.+|..+++.+...|++|++++++..... .+... + .. ...|..+. ..+..+...
T Consensus 139 ~~~~vlv~g~~~~ig~~~~~~~~~~g~~v~~~~~~~~~~~----~~~~~-g------~~-~~~~~~~~~~~~~~~~~~~~ 206 (323)
T cd05276 139 AGETVLIHGGASGVGTAAIQLAKALGARVIATAGSEEKLE----ACRAL-G------AD-VAINYRTEDFAEEVKEATGG 206 (323)
T ss_pred CCCEEEEEcCcChHHHHHHHHHHHcCCEEEEEcCCHHHHH----HHHHc-C------CC-EEEeCCchhHHHHHHHHhCC
Confidence 4578999999999999999999999999998877533222 12111 1 11 11232222 233444433
Q ss_pred CCCCEEEEcccc
Q 019795 80 QKFEAVIHFGAL 91 (335)
Q Consensus 80 ~~~d~vi~~a~~ 91 (335)
.++|.++++++.
T Consensus 207 ~~~d~vi~~~g~ 218 (323)
T cd05276 207 RGVDVILDMVGG 218 (323)
T ss_pred CCeEEEEECCch
Confidence 479999998774
|
PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding |
| >PF08643 DUF1776: Fungal family of unknown function (DUF1776); InterPro: IPR013952 This is a fungal protein of unknown function | Back alignment and domain information |
|---|
Probab=95.44 E-value=0.44 Score=42.14 Aligned_cols=167 Identities=11% Similarity=0.085 Sum_probs=90.2
Q ss_pred CCCeEEEEcC-CChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHH------
Q 019795 3 SEKNILVTGG-AGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDK------ 75 (335)
Q Consensus 3 ~~~~vlItGa-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~------ 75 (335)
....|+|.|. +--+++.++.-|-++|+-|++++.+... .+.+.... ...+.....|..++.++..
T Consensus 2 R~evVvI~Gs~~~PltR~la~DLeRRGFIV~v~~~~~ed----~~~ve~e~----~~dI~~L~ld~~~~~~~~~~l~~f~ 73 (299)
T PF08643_consen 2 RKEVVVIAGSPHDPLTRSLALDLERRGFIVYVTVSSAED----EKYVESED----RPDIRPLWLDDSDPSSIHASLSRFA 73 (299)
T ss_pred ceeEEEEECCCCCccHHHHHHHHhhCCeEEEEEeCCHHH----HHHHHhcc----CCCCCCcccCCCCCcchHHHHHHHH
Confidence 3567999995 8999999999999999999988764332 12222111 1457777778755443333
Q ss_pred -HHhcC------CCCEEEEcccccch-----------hhhhcChHHHHHHhHHHHHHHHHHHHH---c---CCCEEEEec
Q 019795 76 -LFSSQ------KFEAVIHFGALKAV-----------AESVQHPFRYFDNNLIGTINLYQAMAK---Y---NCKKLVFSS 131 (335)
Q Consensus 76 -~~~~~------~~d~vi~~a~~~~~-----------~~~~~~~~~~~~~nv~~~~~l~~~~~~---~---~~~~~v~~S 131 (335)
.++.. ..-...++.++... .-+...+...++.|+..+..+++.+.. . +..++|.+.
T Consensus 74 ~~L~~p~~p~~~~~~h~l~L~svi~~Psl~yp~gPie~i~~s~~~~~ln~~ll~~~~~~q~lLPlL~~~~~~~~~iil~~ 153 (299)
T PF08643_consen 74 SLLSRPHVPFPGAPPHHLQLKSVIFIPSLSYPTGPIETISPSSWADELNTRLLTPILTIQGLLPLLRSRSNQKSKIILFN 153 (299)
T ss_pred HHhcCCCCCCCCCCCceeEEEEEEEecCCCCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEEe
Confidence 33311 11123333332111 112345667788888887777776432 2 234555444
Q ss_pred cccccCCCCCCCccCCCCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccc
Q 019795 132 SATIYGQPEKIPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNP 187 (335)
Q Consensus 132 s~~vyg~~~~~~~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v 187 (335)
-+-.+.-. -|.. .+-.....+.+.+.....+|. .+++++.++.|++
T Consensus 154 Psi~ssl~--------~Pfh--spE~~~~~al~~~~~~LrrEl~~~~I~V~~i~LG~l 201 (299)
T PF08643_consen 154 PSISSSLN--------PPFH--SPESIVSSALSSFFTSLRRELRPHNIDVTQIKLGNL 201 (299)
T ss_pred CchhhccC--------CCcc--CHHHHHHHHHHHHHHHHHHHhhhcCCceEEEEeeee
Confidence 32221100 0111 222333334444444444443 1699999999886
|
One of the proteins P32792 from SWISSPROT has been localised to the mitochondria []. |
| >cd01488 Uba3_RUB Ubiquitin activating enzyme (E1) subunit UBA3 | Back alignment and domain information |
|---|
Probab=95.44 E-value=0.18 Score=44.60 Aligned_cols=75 Identities=27% Similarity=0.410 Sum_probs=46.8
Q ss_pred eEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCC-------------------chhhHHhhhhhcCCccccceeEEEc
Q 019795 6 NILVTGGAGFIGTHCALQLLQGGF-KVVLIDNLHNS-------------------VPEAVDRVKDLAGPELAKKLEFHVG 65 (335)
Q Consensus 6 ~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~-------------------~~~~~~~~~~~~~~~~~~~i~~~~~ 65 (335)
+|||.|+ |.+|.++++.|+..|. +++++|.+.-+ ...+.+.+.++-+ .-++..+..
T Consensus 1 kVlVVGa-GGlG~eilknLal~Gvg~I~IvD~D~Ve~SNLnRQfLf~~~dIGk~KAevaa~~l~~~np---~v~I~~~~~ 76 (291)
T cd01488 1 KILVIGA-GGLGCELLKNLALSGFRNIHVIDMDTIDVSNLNRQFLFREKDIGKPKAEVAAKFVNDRVP---GVNVTPHFG 76 (291)
T ss_pred CEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCEecccccCcCcccChHHcchHHHHHHHHHHHHHCC---CCEEEEEec
Confidence 5899997 9999999999999984 46666543211 1111222222211 135666777
Q ss_pred cCCCHHHHHHHHhcCCCCEEEEc
Q 019795 66 DLRNKDDLDKLFSSQKFEAVIHF 88 (335)
Q Consensus 66 Dl~d~~~~~~~~~~~~~d~vi~~ 88 (335)
++.+.+ .++++ ++|+||.+
T Consensus 77 ~i~~~~--~~f~~--~fdvVi~a 95 (291)
T cd01488 77 KIQDKD--EEFYR--QFNIIICG 95 (291)
T ss_pred ccCchh--HHHhc--CCCEEEEC
Confidence 776542 45666 78999975
|
UBA3 is part of the heterodimeric activating enzyme (E1), specific for the Rub family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins. consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin(-like) by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by Rub family of ubiquitin-like proteins (Ublps) activates SCF ubiquitin ligases and is involved in cell cycle control, signaling and embryogenesis. UBA3 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2. |
| >cd08244 MDR_enoyl_red Possible enoyl reductase | Back alignment and domain information |
|---|
Probab=95.43 E-value=0.1 Score=46.66 Aligned_cols=77 Identities=18% Similarity=0.121 Sum_probs=49.5
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCH---HHHHHHHhc
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNK---DDLDKLFSS 79 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~---~~~~~~~~~ 79 (335)
.+.+|+|+|++|.+|..+++.+...|.+|+++++++..... +.+. ++..+ .|..+. ..+.++...
T Consensus 142 ~~~~vlI~g~~~~~g~~~~~la~~~g~~v~~~~~~~~~~~~----~~~~-------g~~~~-~~~~~~~~~~~~~~~~~~ 209 (324)
T cd08244 142 PGDVVLVTAAAGGLGSLLVQLAKAAGATVVGAAGGPAKTAL----VRAL-------GADVA-VDYTRPDWPDQVREALGG 209 (324)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHH----HHHc-------CCCEE-EecCCccHHHHHHHHcCC
Confidence 35689999999999999999999999999998775443222 2111 11111 122222 334444443
Q ss_pred CCCCEEEEcccc
Q 019795 80 QKFEAVIHFGAL 91 (335)
Q Consensus 80 ~~~d~vi~~a~~ 91 (335)
.++|.|+++.+.
T Consensus 210 ~~~d~vl~~~g~ 221 (324)
T cd08244 210 GGVTVVLDGVGG 221 (324)
T ss_pred CCceEEEECCCh
Confidence 469999998664
|
Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr |
| >PRK12767 carbamoyl phosphate synthase-like protein; Provisional | Back alignment and domain information |
|---|
Probab=95.42 E-value=0.062 Score=48.50 Aligned_cols=70 Identities=21% Similarity=0.186 Sum_probs=45.9
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhC--CCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEc-cCCCH---HHHHHHH
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQG--GFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVG-DLRNK---DDLDKLF 77 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-Dl~d~---~~~~~~~ 77 (335)
|++|||||+++.+ .+++.|.+. |++|++++.++....... . .. .+.. +..++ +.+.+++
T Consensus 1 ~~~vLv~g~~~~~--~~~~~l~~~~~g~~vi~~d~~~~~~~~~~---~--------d~--~~~~p~~~~~~~~~~l~~~~ 65 (326)
T PRK12767 1 MMNILVTSAGRRV--QLVKALKKSLLKGRVIGADISELAPALYF---A--------DK--FYVVPKVTDPNYIDRLLDIC 65 (326)
T ss_pred CceEEEecCCccH--HHHHHHHHhccCCEEEEECCCCcchhhHh---c--------cC--cEecCCCCChhHHHHHHHHH
Confidence 6799999997666 899999998 499999987644322111 0 11 1222 23333 4566677
Q ss_pred hcCCCCEEEEc
Q 019795 78 SSQKFEAVIHF 88 (335)
Q Consensus 78 ~~~~~d~vi~~ 88 (335)
++.++|.|+-+
T Consensus 66 ~~~~id~ii~~ 76 (326)
T PRK12767 66 KKEKIDLLIPL 76 (326)
T ss_pred HHhCCCEEEEC
Confidence 77789998854
|
|
| >PRK06153 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=95.40 E-value=0.22 Score=45.49 Aligned_cols=34 Identities=18% Similarity=0.153 Sum_probs=28.6
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCC-eEEEEecC
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGF-KVVLIDNL 37 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~ 37 (335)
++++|+|.|+ |++|++++..|++.|. ++++++.+
T Consensus 175 ~~~~VaIVG~-GG~GS~Va~~LAR~GVgeI~LVD~D 209 (393)
T PRK06153 175 EGQRIAIIGL-GGTGSYILDLVAKTPVREIHLFDGD 209 (393)
T ss_pred hhCcEEEEcC-CccHHHHHHHHHHcCCCEEEEECCC
Confidence 5678999997 9999999999999984 67777544
|
|
| >TIGR00936 ahcY adenosylhomocysteinase | Back alignment and domain information |
|---|
Probab=95.40 E-value=0.071 Score=49.37 Aligned_cols=39 Identities=21% Similarity=0.315 Sum_probs=34.1
Q ss_pred CCCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCC
Q 019795 1 MASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNS 40 (335)
Q Consensus 1 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~ 40 (335)
++.+++|+|.|. |.||+.+++.+...|.+|+++++++..
T Consensus 192 ~l~Gk~VvViG~-G~IG~~vA~~ak~~Ga~ViV~d~dp~r 230 (406)
T TIGR00936 192 LIAGKTVVVAGY-GWCGKGIAMRARGMGARVIVTEVDPIR 230 (406)
T ss_pred CCCcCEEEEECC-CHHHHHHHHHHhhCcCEEEEEeCChhh
Confidence 357899999997 999999999999999999999886543
|
This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704). |
| >cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members | Back alignment and domain information |
|---|
Probab=95.38 E-value=0.17 Score=45.53 Aligned_cols=37 Identities=24% Similarity=0.223 Sum_probs=32.2
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCC
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHN 39 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 39 (335)
++.+++|.|++|.+|..+++.+...|.+|+++++++.
T Consensus 139 ~~~~vlI~ga~g~ig~~~~~~a~~~g~~v~~~~~~~~ 175 (329)
T cd08250 139 SGETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSDE 175 (329)
T ss_pred CCCEEEEEeCccHHHHHHHHHHHHcCCeEEEEeCcHH
Confidence 4678999999999999999999889999998877543
|
Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. |
| >PRK09880 L-idonate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.38 E-value=0.11 Score=47.17 Aligned_cols=75 Identities=20% Similarity=0.270 Sum_probs=46.3
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc-C
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGF-KVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-Q 80 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-~ 80 (335)
.+.+|+|+|+ |.+|...++.+...|. +|+++++++...+. +.++. ... ..|..+. ++.++.+. .
T Consensus 169 ~g~~VlV~G~-G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~----a~~lG-------a~~-vi~~~~~-~~~~~~~~~g 234 (343)
T PRK09880 169 QGKRVFVSGV-GPIGCLIVAAVKTLGAAEIVCADVSPRSLSL----AREMG-------ADK-LVNPQND-DLDHYKAEKG 234 (343)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEeCCHHHHHH----HHHcC-------CcE-EecCCcc-cHHHHhccCC
Confidence 4678999996 9999999998888898 58888876443322 22211 111 1233222 23333332 2
Q ss_pred CCCEEEEcccc
Q 019795 81 KFEAVIHFGAL 91 (335)
Q Consensus 81 ~~d~vi~~a~~ 91 (335)
++|+||.++|.
T Consensus 235 ~~D~vid~~G~ 245 (343)
T PRK09880 235 YFDVSFEVSGH 245 (343)
T ss_pred CCCEEEECCCC
Confidence 58999998774
|
|
| >PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1 | Back alignment and domain information |
|---|
Probab=95.36 E-value=0.019 Score=47.13 Aligned_cols=43 Identities=26% Similarity=0.472 Sum_probs=34.4
Q ss_pred eEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhh
Q 019795 6 NILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVK 49 (335)
Q Consensus 6 ~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~ 49 (335)
+|.|.|+ |.+|+.++..++..|++|+++++++.......+.+.
T Consensus 1 ~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~l~~~~~~i~ 43 (180)
T PF02737_consen 1 KVAVIGA-GTMGRGIAALFARAGYEVTLYDRSPEALERARKRIE 43 (180)
T ss_dssp EEEEES--SHHHHHHHHHHHHTTSEEEEE-SSHHHHHHHHHHHH
T ss_pred CEEEEcC-CHHHHHHHHHHHhCCCcEEEEECChHHHHhhhhHHH
Confidence 5889998 999999999999999999999998776555555443
|
1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B .... |
| >PRK06598 aspartate-semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=95.35 E-value=0.11 Score=47.45 Aligned_cols=31 Identities=19% Similarity=0.424 Sum_probs=24.2
Q ss_pred CeEEEEcCCChhhHHHHHHHHh-CCCe---EEEEe
Q 019795 5 KNILVTGGAGFIGTHCALQLLQ-GGFK---VVLID 35 (335)
Q Consensus 5 ~~vlItGatG~iG~~l~~~L~~-~g~~---V~~~~ 35 (335)
++|.|.||||++|+.|.+.|++ .... ++.++
T Consensus 2 ~~VAIVGATG~vG~ell~llL~~~~f~~~~l~~~s 36 (369)
T PRK06598 2 KKVGFVGWRGMVGSVLMQRMVEENDFDLIEPVFFS 36 (369)
T ss_pred eEEEEEeCCCHHHHHHHHHHHhCCCCCcCcEEEec
Confidence 6899999999999999995555 4665 55544
|
|
| >PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=95.32 E-value=0.061 Score=47.15 Aligned_cols=35 Identities=26% Similarity=0.434 Sum_probs=31.6
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEec
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDN 36 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r 36 (335)
+.+|+|+|+|.+..+|+.|+..|+++|..|++..+
T Consensus 157 l~Gk~vvViGrs~iVG~Pla~lL~~~~atVtv~hs 191 (285)
T PRK10792 157 TYGLNAVVVGASNIVGRPMSLELLLAGCTVTVCHR 191 (285)
T ss_pred CCCCEEEEECCCcccHHHHHHHHHHCCCeEEEEEC
Confidence 46899999999999999999999999999888754
|
|
| >PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=95.30 E-value=0.22 Score=47.12 Aligned_cols=75 Identities=24% Similarity=0.293 Sum_probs=50.5
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCC
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKF 82 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~ 82 (335)
.+|+|+|+|+ |..|..+++.|.++|+.|++.+..+... ...++.+.. .++.+..+...+ ..+. .+
T Consensus 4 ~~~~~~v~G~-g~~G~~~a~~l~~~g~~v~~~d~~~~~~--~~~~l~~~~-----~gi~~~~g~~~~-----~~~~--~~ 68 (445)
T PRK04308 4 QNKKILVAGL-GGTGISMIAYLRKNGAEVAAYDAELKPE--RVAQIGKMF-----DGLVFYTGRLKD-----ALDN--GF 68 (445)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCch--hHHHHhhcc-----CCcEEEeCCCCH-----HHHh--CC
Confidence 4689999998 6899999999999999999998755431 122232210 245555544221 1233 68
Q ss_pred CEEEEccccc
Q 019795 83 EAVIHFGALK 92 (335)
Q Consensus 83 d~vi~~a~~~ 92 (335)
|.||...|+.
T Consensus 69 d~vv~spgi~ 78 (445)
T PRK04308 69 DILALSPGIS 78 (445)
T ss_pred CEEEECCCCC
Confidence 9999988875
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 335 | ||||
| 1hzj_A | 348 | Human Udp-Galactose 4-Epimerase: Accommodation Of U | 5e-98 | ||
| 1i3k_A | 348 | Molecular Basis For Severe Epimerase-Deficiency Gal | 1e-97 | ||
| 1ek5_A | 348 | Structure Of Human Udp-Galactose 4-Epimerase In Com | 2e-97 | ||
| 3enk_A | 341 | 1.9a Crystal Structure Of Udp-Glucose 4-Epimerase F | 6e-96 | ||
| 2udp_A | 338 | Udp-Galactose 4-Epimerase Complexed With Udp-Phenol | 3e-93 | ||
| 1lrj_A | 338 | Crystal Structure Of E. Coli Udp-Galactose 4-Epimer | 3e-93 | ||
| 1lrk_A | 338 | Crystal Structure Of Escherichia Coli Udp-Galactose | 4e-93 | ||
| 1kvs_A | 338 | Udp-Galactose 4-Epimerase Complexed With Udp-Phenol | 6e-93 | ||
| 1kvu_A | 338 | Udp-Galactose 4-Epimerase Complexed With Udp-Phenol | 7e-93 | ||
| 1kvr_A | 338 | Udp-Galactose 4-Epimerase Complexed With Udp-Phenol | 7e-93 | ||
| 1kvq_A | 338 | Udp-Galactose 4-Epimerase Complexed With Udp-Phenol | 8e-93 | ||
| 1kvt_A | 338 | Udp-Galactose 4-Epimerase Complexed With Udp-Phenol | 1e-92 | ||
| 1a9y_A | 338 | Udp-Galactose 4-Epimerase Mutant S124aY149F COMPLEX | 2e-92 | ||
| 1a9z_A | 338 | Udp-Galactose 4-Epimerase Mutant S124aY149F COMPLEX | 2e-92 | ||
| 1z45_A | 699 | Crystal Structure Of The Gal10 Fusion Protein Galac | 1e-87 | ||
| 2c20_A | 330 | Crystal Structure Of Udp-Glucose 4-Epimerase Length | 6e-58 | ||
| 1gy8_A | 397 | Trypanosoma Brucei Udp-Galactose 4' Epimerase Lengt | 9e-54 | ||
| 2p5u_A | 311 | Crystal Structure Of Thermus Thermophilus Hb8 Udp-G | 6e-25 | ||
| 3icp_A | 312 | Crystal Structure Of Udp-Galactose 4-Epimerase Leng | 1e-23 | ||
| 3vps_A | 321 | Structure Of A Novel Nad Dependent-Ndp-Hexosamine 5 | 1e-22 | ||
| 4egb_A | 346 | 3.0 Angstrom Resolution Crystal Structure Of Dtdp-G | 2e-22 | ||
| 3aw9_A | 308 | Structure Of Udp-Galactose 4-Epimerase Mutant Lengt | 6e-22 | ||
| 3ehe_A | 313 | Crystal Structure Of Udp-Glucose 4 Epimerase (Gale- | 4e-21 | ||
| 1sb8_A | 352 | Crystal Structure Of Pseudomonas Aeruginosa Udp-N-A | 5e-21 | ||
| 4ef7_B | 337 | Udp-Xylose Synthase Length = 337 | 5e-19 | ||
| 2b69_A | 343 | Crystal Structure Of Human Udp-Glucoronic Acid Deca | 9e-18 | ||
| 3ruc_A | 351 | Specific Recognition Of N-Acetylated Substrates And | 9e-17 | ||
| 2pzj_A | 377 | Crystal Structure Of The Bordetella Bronchiseptica | 3e-16 | ||
| 3lu1_A | 364 | Crystal Structure Analysis Of Wbgu: A Udp-Galnac 4- | 4e-16 | ||
| 3ru9_A | 351 | Specific Recognition Of N-Acetylated Substrates And | 5e-16 | ||
| 3ru7_A | 351 | Specific Recognition Of N-Acetylated Substrates And | 5e-16 | ||
| 1r6d_A | 337 | Crystal Structure Of Desiv Double Mutant (Dtdp-Gluc | 2e-15 | ||
| 1r66_A | 337 | Crystal Structure Of Desiv (Dtdp-Glucose 4,6-Dehydr | 2e-15 | ||
| 1orr_A | 347 | Crystal Structure Of Cdp-tyvelose 2-epimerase Compl | 4e-15 | ||
| 2pzk_A | 330 | Crystal Structure Of The Bordetella Bronchiseptica | 1e-13 | ||
| 1kep_A | 348 | The Crystal Structure Of Dtdp-D-Glucose 4,6-Dehydra | 2e-13 | ||
| 2hun_A | 336 | Crystal Structure Of Hypothetical Protein Ph0414 Fr | 4e-13 | ||
| 1bxk_A | 355 | Dtdp-Glucose 4,6-Dehydratase From E. Coli Length = | 1e-11 | ||
| 1g1a_A | 361 | The Crystal Structure Of Dtdp-D-Glucose 4,6-Dehydra | 2e-11 | ||
| 1db3_A | 372 | E.Coli Gdp-Mannose 4,6-Dehydratase Length = 372 | 5e-11 | ||
| 1wvg_A | 359 | Structure Of Cdp-D-Glucose 4,6-Dehydratase From Sal | 2e-10 | ||
| 2q1w_A | 333 | Crystal Structure Of The Bordetella Bronchiseptica | 3e-10 | ||
| 2pk3_A | 321 | Crystal Structure Of A Gdp-4-Keto-6-Deoxy-D-Mannose | 6e-10 | ||
| 1eq2_A | 310 | The Crystal Structure Of Adp-L-Glycero-D-Mannohepto | 2e-09 | ||
| 3sxp_A | 362 | Crystal Structure Of Helicobacter Pylori Adp-L-Glyc | 3e-09 | ||
| 2x6t_A | 357 | Agme Bound To Adp-B-Mannose Length = 357 | 6e-09 | ||
| 4id9_A | 347 | Crystal Structure Of A Short-Chain DehydrogenaseRED | 1e-08 | ||
| 1qrr_A | 394 | Crystal Structure Of Sqd1 Protein Complex With Nad | 5e-08 | ||
| 1i2b_A | 404 | Crystal Structure Of Mutant T145a Sqd1 Protein Comp | 1e-07 | ||
| 1i24_A | 404 | High Resolution Crystal Structure Of The Wild-Type | 2e-07 | ||
| 3slg_A | 372 | Crystal Structure Of Pbgp3 Protein From Burkholderi | 9e-07 | ||
| 1t2a_A | 375 | Crystal Structure Of Human Gdp-D-Mannose 4,6-Dehydr | 1e-06 | ||
| 1rkx_A | 357 | Crystal Structure At 1.8 Angstrom Of Cdp-D-Glucose | 2e-06 | ||
| 3m2p_A | 311 | The Crystal Structure Of Udp-N-Acetylglucosamine 4- | 4e-06 | ||
| 2hrz_A | 342 | The Crystal Structure Of The Nucleoside-diphosphate | 4e-06 | ||
| 1e6u_A | 321 | Gdp 4-Keto-6-Deoxy-D-Mannose Epimerase Reductase Le | 1e-05 | ||
| 3a1n_A | 317 | Crystal Structure Of L-Threonine Dehydrogenase From | 2e-05 | ||
| 3a9w_A | 317 | Crystal Structure Of L-Threonine Bound L-Threonine | 2e-05 | ||
| 1bsv_A | 321 | Gdp-Fucose Synthetase From Escherichia Coli Complex | 3e-05 | ||
| 1e7r_A | 321 | Gdp 4-Keto-6-Deoxy-D-Mannose Epimerase Reductase Y1 | 3e-05 | ||
| 2c5e_A | 379 | Gdp-Mannose-3', 5' -Epimerase (Arabidopsis Thaliana | 3e-05 | ||
| 2c59_A | 379 | Gdp-Mannose-3', 5' -Epimerase (Arabidopsis Thaliana | 3e-05 | ||
| 1e7s_A | 321 | Gdp 4-Keto-6-Deoxy-D-Mannose Epimerase Reductase K1 | 5e-05 | ||
| 2c54_A | 379 | Gdp-Mannose-3', 5' -Epimerase (Arabidopsis Thaliana | 6e-05 | ||
| 1e7q_A | 321 | Gdp 4-Keto-6-Deoxy-D-Mannose Epimerase Reductase S1 | 6e-05 | ||
| 1bws_A | 321 | Crystal Structure Of Gdp-4-Keto-6-Deoxy-D-Mannose E | 7e-05 | ||
| 2c5a_A | 379 | Gdp-Mannose-3', 5' -Epimerase (Arabidopsis Thaliana | 8e-05 | ||
| 2gn4_A | 344 | Crystal Structure Of Udp-Glcnac Inverting 4,6-Dehyd | 1e-04 | ||
| 2z1m_A | 345 | Crystal Structure Of Gdp-D-Mannose Dehydratase From | 6e-04 | ||
| 1z73_A | 358 | Crystal Structure Of E. Coli Arna Dehydrogenase (de | 7e-04 |
| >pdb|1HZJ|A Chain A, Human Udp-Galactose 4-Epimerase: Accommodation Of Udp-N- Acetylglucosamine Within The Active Site Length = 348 | Back alignment and structure |
|
| >pdb|1I3K|A Chain A, Molecular Basis For Severe Epimerase-Deficiency Galactosemia: X-Ray Structure Of The Human V94m- Substituted Udp-Galactose 4-Epimerase Length = 348 | Back alignment and structure |
|
| >pdb|1EK5|A Chain A, Structure Of Human Udp-Galactose 4-Epimerase In Complex With Nad+ Length = 348 | Back alignment and structure |
|
| >pdb|3ENK|A Chain A, 1.9a Crystal Structure Of Udp-Glucose 4-Epimerase From Burkholderia Pseudomallei Length = 341 | Back alignment and structure |
|
| >pdb|2UDP|A Chain A, Udp-Galactose 4-Epimerase Complexed With Udp-Phenol Length = 338 | Back alignment and structure |
|
| >pdb|1LRJ|A Chain A, Crystal Structure Of E. Coli Udp-Galactose 4-Epimerase Complexed With Udp-N-Acetylglucosamine Length = 338 | Back alignment and structure |
|
| >pdb|1LRK|A Chain A, Crystal Structure Of Escherichia Coli Udp-Galactose 4-Epimerase Mutant Y299c Complexed With Udp-N-Acetylglucosamine Length = 338 | Back alignment and structure |
|
| >pdb|1KVS|A Chain A, Udp-Galactose 4-Epimerase Complexed With Udp-Phenol Length = 338 | Back alignment and structure |
|
| >pdb|1KVU|A Chain A, Udp-Galactose 4-Epimerase Complexed With Udp-Phenol Length = 338 | Back alignment and structure |
|
| >pdb|1KVR|A Chain A, Udp-Galactose 4-Epimerase Complexed With Udp-Phenol Length = 338 | Back alignment and structure |
|
| >pdb|1KVQ|A Chain A, Udp-Galactose 4-Epimerase Complexed With Udp-Phenol Length = 338 | Back alignment and structure |
|
| >pdb|1KVT|A Chain A, Udp-Galactose 4-Epimerase Complexed With Udp-Phenol Length = 338 | Back alignment and structure |
|
| >pdb|1A9Y|A Chain A, Udp-Galactose 4-Epimerase Mutant S124aY149F COMPLEXED WITH UDP- Glucose Length = 338 | Back alignment and structure |
|
| >pdb|1A9Z|A Chain A, Udp-Galactose 4-Epimerase Mutant S124aY149F COMPLEXED WITH UDP- Galactose Length = 338 | Back alignment and structure |
|
| >pdb|1Z45|A Chain A, Crystal Structure Of The Gal10 Fusion Protein Galactose MutarotaseUDP-Galactose 4-Epimerase From Saccharomyces Cerevisiae Complexed With Nad, Udp-Glucose, And Galactose Length = 699 | Back alignment and structure |
|
| >pdb|2C20|A Chain A, Crystal Structure Of Udp-Glucose 4-Epimerase Length = 330 | Back alignment and structure |
|
| >pdb|1GY8|A Chain A, Trypanosoma Brucei Udp-Galactose 4' Epimerase Length = 397 | Back alignment and structure |
|
| >pdb|2P5U|A Chain A, Crystal Structure Of Thermus Thermophilus Hb8 Udp-Glucose 4- Epimerase Complex With Nad Length = 311 | Back alignment and structure |
|
| >pdb|3ICP|A Chain A, Crystal Structure Of Udp-Galactose 4-Epimerase Length = 312 | Back alignment and structure |
|
| >pdb|3VPS|A Chain A, Structure Of A Novel Nad Dependent-Ndp-Hexosamine 5,6-Dehydratase, Tuna, Involved In Tunicamycin Biosynthesis Length = 321 | Back alignment and structure |
|
| >pdb|4EGB|A Chain A, 3.0 Angstrom Resolution Crystal Structure Of Dtdp-Glucose 4,6- Dehydratase (Rfbb) From Bacillus Anthracis Str. Ames In Complex With Nad Length = 346 | Back alignment and structure |
|
| >pdb|3AW9|A Chain A, Structure Of Udp-Galactose 4-Epimerase Mutant Length = 308 | Back alignment and structure |
|
| >pdb|3EHE|A Chain A, Crystal Structure Of Udp-Glucose 4 Epimerase (Gale-1) From Archaeoglobus Fulgidus Length = 313 | Back alignment and structure |
|
| >pdb|1SB8|A Chain A, Crystal Structure Of Pseudomonas Aeruginosa Udp-N-Acetylglucosamine 4- Epimerase Complexed With Udp-N-Acetylgalactosamine Length = 352 | Back alignment and structure |
|
| >pdb|2B69|A Chain A, Crystal Structure Of Human Udp-Glucoronic Acid Decarboxylase Length = 343 | Back alignment and structure |
|
| >pdb|3RUC|A Chain A, Specific Recognition Of N-Acetylated Substrates And Domain Flexibility In Wbgu: A Udp-Galnac 4-Epimerase Length = 351 | Back alignment and structure |
|
| >pdb|2PZJ|A Chain A, Crystal Structure Of The Bordetella Bronchiseptica Enzyme Wbmf In Complex With Nad+ Length = 377 | Back alignment and structure |
|
| >pdb|3LU1|A Chain A, Crystal Structure Analysis Of Wbgu: A Udp-Galnac 4-Epimerase Length = 364 | Back alignment and structure |
|
| >pdb|3RU9|A Chain A, Specific Recognition Of N-Acetylated Substrates And Domain Flexibility In Wbgu: A Udp-Galnac 4-Epimerase Length = 351 | Back alignment and structure |
|
| >pdb|3RU7|A Chain A, Specific Recognition Of N-Acetylated Substrates And Domain Flexibility In Wbgu: A Udp-Galnac 4-Epimerase Length = 351 | Back alignment and structure |
|
| >pdb|1R6D|A Chain A, Crystal Structure Of Desiv Double Mutant (Dtdp-Glucose 4,6- Dehydratase) From Streptomyces Venezuelae With Nad And Dau Bound Length = 337 | Back alignment and structure |
|
| >pdb|1R66|A Chain A, Crystal Structure Of Desiv (Dtdp-Glucose 4,6-Dehydratase) From Streptomyces Venezuelae With Nad And Tyd Bound Length = 337 | Back alignment and structure |
|
| >pdb|1ORR|A Chain A, Crystal Structure Of Cdp-tyvelose 2-epimerase Complexed With Nad And Cdp Length = 347 | Back alignment and structure |
|
| >pdb|2PZK|A Chain A, Crystal Structure Of The Bordetella Bronchiseptica Enzyme Wbmg In Complex With Nad Length = 330 | Back alignment and structure |
|
| >pdb|1KEP|A Chain A, The Crystal Structure Of Dtdp-D-Glucose 4,6-Dehydratase (Rmlb) From Streptococcus Suis With Dtdp-Xylose Bound Length = 348 | Back alignment and structure |
|
| >pdb|2HUN|A Chain A, Crystal Structure Of Hypothetical Protein Ph0414 From Pyrococcus Horikoshii Ot3 Length = 336 | Back alignment and structure |
|
| >pdb|1BXK|A Chain A, Dtdp-Glucose 4,6-Dehydratase From E. Coli Length = 355 | Back alignment and structure |
|
| >pdb|1G1A|A Chain A, The Crystal Structure Of Dtdp-D-Glucose 4,6-Dehydratase (Rmlb)from Salmonella Enterica Serovar Typhimurium Length = 361 | Back alignment and structure |
|
| >pdb|1DB3|A Chain A, E.Coli Gdp-Mannose 4,6-Dehydratase Length = 372 | Back alignment and structure |
|
| >pdb|1WVG|A Chain A, Structure Of Cdp-D-Glucose 4,6-Dehydratase From Salmonella Typhi Length = 359 | Back alignment and structure |
|
| >pdb|2Q1W|A Chain A, Crystal Structure Of The Bordetella Bronchiseptica Enzyme Wbmh In Complex With Nad+ Length = 333 | Back alignment and structure |
|
| >pdb|2PK3|A Chain A, Crystal Structure Of A Gdp-4-Keto-6-Deoxy-D-Mannose Reductase Length = 321 | Back alignment and structure |
|
| >pdb|1EQ2|A Chain A, The Crystal Structure Of Adp-L-Glycero-D-Mannoheptose 6- Epimerase Length = 310 | Back alignment and structure |
|
| >pdb|3SXP|A Chain A, Crystal Structure Of Helicobacter Pylori Adp-L-Glycero-D-Manno- Heptose-6-Epimerase (Rfad, Hp0859) Length = 362 | Back alignment and structure |
|
| >pdb|2X6T|A Chain A, Agme Bound To Adp-B-Mannose Length = 357 | Back alignment and structure |
|
| >pdb|4ID9|A Chain A, Crystal Structure Of A Short-Chain DehydrogenaseREDUCTASE SUPERFAMILY Protein From Agrobacterium Tumefaciens (Target Efi-506441) With Bound Nad, Monoclinic Form 1 Length = 347 | Back alignment and structure |
|
| >pdb|1QRR|A Chain A, Crystal Structure Of Sqd1 Protein Complex With Nad And Udp- Glucose Length = 394 | Back alignment and structure |
|
| >pdb|1I2B|A Chain A, Crystal Structure Of Mutant T145a Sqd1 Protein Complex With Nad And Udp-SulfoquinovoseUDP-Glucose Length = 404 | Back alignment and structure |
|
| >pdb|1I24|A Chain A, High Resolution Crystal Structure Of The Wild-Type Protein Sqd1, With Nad And Udp-Glucose Length = 404 | Back alignment and structure |
|
| >pdb|3SLG|A Chain A, Crystal Structure Of Pbgp3 Protein From Burkholderia Pseudomallei Length = 372 | Back alignment and structure |
|
| >pdb|1T2A|A Chain A, Crystal Structure Of Human Gdp-D-Mannose 4,6-Dehydratase Length = 375 | Back alignment and structure |
|
| >pdb|1RKX|A Chain A, Crystal Structure At 1.8 Angstrom Of Cdp-D-Glucose 4,6- Dehydratase From Yersinia Pseudotuberculosis Length = 357 | Back alignment and structure |
|
| >pdb|3M2P|A Chain A, The Crystal Structure Of Udp-N-Acetylglucosamine 4-Epimerase From Bacillus Cereus Length = 311 | Back alignment and structure |
|
| >pdb|2HRZ|A Chain A, The Crystal Structure Of The Nucleoside-diphosphate-sugar Epimerase From Agrobacterium Tumefaciens Length = 342 | Back alignment and structure |
|
| >pdb|1E6U|A Chain A, Gdp 4-Keto-6-Deoxy-D-Mannose Epimerase Reductase Length = 321 | Back alignment and structure |
|
| >pdb|3A1N|A Chain A, Crystal Structure Of L-Threonine Dehydrogenase From Hyperthermophilic Archaeon Thermoplasma Volcanium Length = 317 | Back alignment and structure |
|
| >pdb|3A9W|A Chain A, Crystal Structure Of L-Threonine Bound L-Threonine Dehydrogenase (Y137f) From Hyperthermophilic Archaeon Thermoplasma Volcanium Length = 317 | Back alignment and structure |
|
| >pdb|1BSV|A Chain A, Gdp-Fucose Synthetase From Escherichia Coli Complex With Nadph Length = 321 | Back alignment and structure |
|
| >pdb|1E7R|A Chain A, Gdp 4-Keto-6-Deoxy-D-Mannose Epimerase Reductase Y136e Length = 321 | Back alignment and structure |
|
| >pdb|2C5E|A Chain A, Gdp-Mannose-3', 5' -Epimerase (Arabidopsis Thaliana), K217a, With Gdp-Alpha-D-Mannose Bound In The Active Site. Length = 379 | Back alignment and structure |
|
| >pdb|2C59|A Chain A, Gdp-Mannose-3', 5' -Epimerase (Arabidopsis Thaliana), With Gdp-Alpha-D-Mannose And Gdp-Beta-L-Galactose Bound In The Active Site. Length = 379 | Back alignment and structure |
|
| >pdb|1E7S|A Chain A, Gdp 4-Keto-6-Deoxy-D-Mannose Epimerase Reductase K140r Length = 321 | Back alignment and structure |
|
| >pdb|2C54|A Chain A, Gdp-Mannose-3', 5' -Epimerase (Arabidopsis Thaliana), K178r, With Gdp-Beta-L-Gulose And Gdp-4-Keto-Beta-L-Gulose Bound In Active Site. Length = 379 | Back alignment and structure |
|
| >pdb|1E7Q|A Chain A, Gdp 4-Keto-6-Deoxy-D-Mannose Epimerase Reductase S107a Length = 321 | Back alignment and structure |
|
| >pdb|1BWS|A Chain A, Crystal Structure Of Gdp-4-Keto-6-Deoxy-D-Mannose EpimeraseREDUCTASE From Escherichia Coli A Key Enzyme In The Biosynthesis Of Gdp-L- Fucose Length = 321 | Back alignment and structure |
|
| >pdb|2C5A|A Chain A, Gdp-Mannose-3', 5' -Epimerase (Arabidopsis Thaliana), Y174f, With Gdp-Beta-L-Galactose Bound In The Active Site Length = 379 | Back alignment and structure |
|
| >pdb|2GN4|A Chain A, Crystal Structure Of Udp-Glcnac Inverting 4,6-Dehydratase In Complex With Nadph And Udp-Glcnac Length = 344 | Back alignment and structure |
|
| >pdb|2Z1M|A Chain A, Crystal Structure Of Gdp-D-Mannose Dehydratase From Aquifex Aeolicus Vf5 Length = 345 | Back alignment and structure |
|
| >pdb|1Z73|A Chain A, Crystal Structure Of E. Coli Arna Dehydrogenase (decarboxylase) Domain, S433a Mutant Length = 358 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} Length = 341 | Back alignment and structure |
|---|
Score = 615 bits (1589), Expect = 0.0
Identities = 173/343 (50%), Positives = 224/343 (65%), Gaps = 17/343 (4%)
Query: 1 MASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKL 60
M+++ ILVTGGAG+IG+H A++LL G+ VV+ DNL NS EA+ R++ + G K
Sbjct: 2 MSTKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITG----KTP 57
Query: 61 EFHVGDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMA 120
FH D+ ++ L ++F + A IHF ALKAV ESV P Y+ NNL ++L + M
Sbjct: 58 AFHETDVSDERALARIFDAHPITAAIHFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMR 117
Query: 121 KYNCKKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKADPEWRII 180
+ K++VFSSSAT+YG PE+ P E FP A NPYG+TK E+I DV+ ADP WR+
Sbjct: 118 ERAVKRIVFSSSATVYGVPERSPIDETFPLSATNPYGQTKLMAEQILRDVEAADPSWRVA 177
Query: 181 LLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAVRDY 240
LRYFNPVGAHESG +GEDP GIPNNLMPY+ QVAVG+ +L V+G DYPT DG+ VRDY
Sbjct: 178 TLRYFNPVGAHESGLIGEDPAGIPNNLMPYVAQVAVGKLEKLRVFGSDYPTPDGTGVRDY 237
Query: 241 IHVMDLADG-------------CIAYNLGNGKGISVLEMVAAFEKASGKKIPIKFCPRRV 287
IHV+DLA G + NLG G+G SVLE+V AFEKASG+ +P + RR
Sbjct: 238 IHVVDLARGHIAALDALERRDASLTVNLGTGRGYSVLEVVRAFEKASGRAVPYELVARRP 297
Query: 288 GDATAVYAATDKAHKELGWKPKYGIEDMCAHQWNWAKNNPMGY 330
GD YA A + +GWK + +E MCA W W +NNP G+
Sbjct: 298 GDVAECYANPAAAAETIGWKAERDLERMCADHWRWQENNPRGF 340
|
| >1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A* Length = 338 | Back alignment and structure |
|---|
Score = 604 bits (1560), Expect = 0.0
Identities = 170/339 (50%), Positives = 215/339 (63%), Gaps = 18/339 (5%)
Query: 6 NILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVG 65
+LVTGG+G+IG+H +QLLQ G V+++DNL NS + ++ L G K F G
Sbjct: 2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGG----KHPTFVEG 57
Query: 66 DLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCK 125
D+RN+ + ++ + VIHF LKAV ESVQ P Y+DNN+ GT+ L AM N K
Sbjct: 58 DIRNEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVK 117
Query: 126 KLVFSSSATIYGQPEKIPCVEDFPYG-AMNPYGRTKQWCEEIAFDVQKADPEWRIILLRY 184
+FSSSAT+YG KIP VE FP G +PYG++K E+I D+QKA P+W I LLRY
Sbjct: 118 NFIFSSSATVYGDNPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPDWSIALLRY 177
Query: 185 FNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAVRDYIHVM 244
FNPVGAH SG +GEDP+GIPNNLMPYI QVAVGR L ++G DYPT+DG+ VRDYIHVM
Sbjct: 178 FNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVM 237
Query: 245 DLADG-------------CIAYNLGNGKGISVLEMVAAFEKASGKKIPIKFCPRRVGDAT 291
DLADG YNLG G G SVL++V AF KA GK + F PRR GD
Sbjct: 238 DLADGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKACGKPVNYHFAPRREGDLP 297
Query: 292 AVYAATDKAHKELGWKPKYGIEDMCAHQWNWAKNNPMGY 330
A +A KA +EL W+ +++M W+W +P GY
Sbjct: 298 AYWADASKADRELNWRVTRTLDEMAQDTWHWQSRHPQGY 336
|
| >1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A* Length = 348 | Back alignment and structure |
|---|
Score = 597 bits (1541), Expect = 0.0
Identities = 178/349 (51%), Positives = 224/349 (64%), Gaps = 24/349 (6%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHN------SVPEAVDRVKDLAGPELAK 58
+ +LVTGGAG+IG+H L+LL+ G+ V+IDN HN S+PE++ RV++L G +
Sbjct: 3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTG----R 58
Query: 59 KLEFHVGDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQA 118
+EF D+ ++ L +LF F AVIHF LKAV ESVQ P Y+ NL GTI L +
Sbjct: 59 SVEFEEMDILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEI 118
Query: 119 MAKYNCKKLVFSSSATIYGQPEKIPCVEDFPYGA-MNPYGRTKQWCEEIAFDVQKADPEW 177
M + K LVFSSSAT+YG P+ +P E P G NPYG++K + EE+ D+ +AD W
Sbjct: 119 MKAHGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQADKTW 178
Query: 178 RIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAV 237
+LLRYFNP GAH SG +GEDP+GIPNNLMPY+ QVA+GR LNV+G DY T+DG+ V
Sbjct: 179 NAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGV 238
Query: 238 RDYIHVMDLADG-------------CIAYNLGNGKGISVLEMVAAFEKASGKKIPIKFCP 284
RDYIHV+DLA G C YNLG G G SVL+MV A EKASGKKIP K
Sbjct: 239 RDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGKKIPYKVVA 298
Query: 285 RRVGDATAVYAATDKAHKELGWKPKYGIEDMCAHQWNWAKNNPMGYQTK 333
RR GD A YA A +ELGW G++ MC W W K NP G+ T+
Sbjct: 299 RREGDVAACYANPSLAQEELGWTAALGLDRMCEDLWRWQKQNPSGFGTQ 347
|
| >1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2 Length = 699 | Back alignment and structure |
|---|
Score = 601 bits (1551), Expect = 0.0
Identities = 160/355 (45%), Positives = 220/355 (61%), Gaps = 26/355 (7%)
Query: 1 MASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKL 60
++ K +LVTGGAG+IG+H ++L++ G+ V+ DNL NS ++V R++ L +
Sbjct: 8 ESTSKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTK----HHI 63
Query: 61 EFHVGDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMA 120
F+ DL ++ L+K+F K ++VIHF LKAV ES Q P RY+ NN++GT+ L + M
Sbjct: 64 PFYEVDLCDRKGLEKVFKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQ 123
Query: 121 KYNCKKLVFSSSATIYGQ----PEKIPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKADPE 176
+YN K VFSSSAT+YG P IP E+ P G NPYG TK E I D+ +D +
Sbjct: 124 QYNVSKFVFSSSATVYGDATRFPNMIPIPEECPLGPTNPYGHTKYAIENILNDLYNSDKK 183
Query: 177 -WRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGS 235
W+ +LRYFNP+GAH SG +GEDP GIPNNL+PY+ QVAVGR +L ++G DY ++DG+
Sbjct: 184 SWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDGT 243
Query: 236 AVRDYIHVMDLADG-----------------CIAYNLGNGKGISVLEMVAAFEKASGKKI 278
+RDYIHV+DLA G C +NLG+GKG +V E+ AF KASG +
Sbjct: 244 PIRDYIHVVDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGSTVFEVYHAFCKASGIDL 303
Query: 279 PIKFCPRRVGDATAVYAATDKAHKELGWKPKYGIEDMCAHQWNWAKNNPMGYQTK 333
P K RR GD + A D+A +EL W+ + +ED C W W NP GYQ +
Sbjct: 304 PYKVTGRRAGDVLNLTAKPDRAKRELKWQTELQVEDSCKDLWKWTTENPFGYQLR 358
|
| >1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A* Length = 397 | Back alignment and structure |
|---|
Score = 507 bits (1309), Expect = 0.0
Identities = 129/385 (33%), Positives = 193/385 (50%), Gaps = 56/385 (14%)
Query: 6 NILVTGGAGFIGTHCALQLLQ-GGFKVVLIDNLHNSVPEAV---------DRVKDLAG-- 53
+LV GGAG+IG+H LL+ VV++D+L + ++ +++ G
Sbjct: 4 RVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPK 63
Query: 54 -PELAKKLEFHVGDLRNKDDLDKLFSS-QKFEAVIHFGALKAVAESVQHPFRYFDNNLIG 111
P + VGD+RN+D L+ +F+ +AV+H A AV ESV+ P +Y+DNN++G
Sbjct: 64 PPWADRYAALEVGDVRNEDFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVG 123
Query: 112 TINLYQAMAKYNCKKLVFSSSATIYGQP-------EKIPCVEDFPYGAMNPYGRTKQWCE 164
+ L QAM + C K++FSSSA I+G P P + +PYG +K E
Sbjct: 124 ILRLLQAMLLHKCDKIIFSSSAAIFGNPTMGSVSTNAEPIDINAKKSPESPYGESKLIAE 183
Query: 165 EIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKG----IPNNLMPYIQQVAVGR-- 218
+ D +A + I LRYFN GAHE G +GE +G IP L + +A +
Sbjct: 184 RMIRDCAEAYG-IKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSDIAPDQRL 242
Query: 219 --------HPELNVYGQDYPTKDGSAVRDYIHVMDLADG-------------------CI 251
+ ++G DYPT DG+ VRDY+HV DLA
Sbjct: 243 TIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFS 302
Query: 252 AYNLGNGKGISVLEMVAAFEKASGKKIPIKFCPRRVGDATAVYAATDKAHKELGWKPKYG 311
+NLG +G SV E++ K +G IP++ C RR GD + AA+DKA + LGWKPKY
Sbjct: 303 VFNLGTSRGYSVREVIEVARKTTGHPIPVRECGRREGDPAYLVAASDKAREVLGWKPKYD 362
Query: 312 -IEDMCAHQWNWAKNNPMGYQTKRT 335
+E + W + + +P GY ++
Sbjct: 363 TLEAIMETSWKFQRTHPNGYASQEN 387
|
| >2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis} Length = 330 | Back alignment and structure |
|---|
Score = 495 bits (1278), Expect = e-178
Identities = 120/341 (35%), Positives = 186/341 (54%), Gaps = 27/341 (7%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHV 64
+IL+ GGAG+IG+H +L+ G VV++DNL +A+ +F+
Sbjct: 2 NSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHEDAITE-----------GAKFYN 50
Query: 65 GDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNC 124
GDLR+K L +F+ + EAV+HF A V S++ P +Y++NN+ G + L + M ++
Sbjct: 51 GDLRDKAFLRDVFTQENIEAVMHFAADSLVGVSMEKPLQYYNNNVYGALCLLEVMDEFKV 110
Query: 125 KKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKADPEWRIILLRY 184
K +FSS+A YG+ + E+ N YG TK E++ +A R + RY
Sbjct: 111 DKFIFSSTAATYGEVDVDLITEETMTNPTNTYGETKLAIEKMLHWYSQASN-LRYKIFRY 169
Query: 185 FNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAVRDYIHVM 244
FN GA +G +GED + +L+P + QVA+G+ ++ ++G DY T DG+ +RDYIHV
Sbjct: 170 FNVAGATPNGIIGEDHRP-ETHLIPLVLQVALGQREKIMMFGDDYNTPDGTCIRDYIHVE 228
Query: 245 DLADG-------------CIAYNLGNGKGISVLEMVAAFEKASGKKIPIKFCPRRVGDAT 291
DL YNLGNG G SV E+V A + + +IP + PRR GD
Sbjct: 229 DLVAAHFLGLKDLQNGGESDFYNLGNGNGFSVKEIVDAVREVTNHEIPAEVAPRRAGDPA 288
Query: 292 AVYAATDKAHKELGWKPKY-GIEDMCAHQWNWAKNNPMGYQ 331
+ A++ KA ++LGW P+Y ++ + H WNW + P GY+
Sbjct: 289 RLVASSQKAKEKLGWDPRYVNVKTIIEHAWNWHQKQPNGYE 329
|
| >2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* Length = 330 | Back alignment and structure |
|---|
Score = 382 bits (983), Expect = e-133
Identities = 74/332 (22%), Positives = 122/332 (36%), Gaps = 50/332 (15%)
Query: 6 NILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVG 65
IL+TGGAG +G++ L G ++++IDN E + V L G
Sbjct: 22 RILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPVA---------GLSVIEG 72
Query: 66 DLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCK 125
+ + L++ F S K V+H A A + N+ G+IN+ +A +K K
Sbjct: 73 SVTDAGLLERAFDSFKPTHVVHS-A--AAYKDPDDWAEDAATNVQGSINVAKAASKAGVK 129
Query: 126 KLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKADPEWRIILLRYF 185
+L+ +A YG+P +P D P YG +K E + ++ LR
Sbjct: 130 RLLNFQTALCYGRPATVPIPIDSPTAPFTSYGISKTAGEAFL-----MMSDVPVVSLRLA 184
Query: 186 NPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAVRDYIHVMD 245
N G +G P + +++ G+ + D VRD++ + D
Sbjct: 185 NVTGPR--LAIGPIPT--------FYKRLKAGQ----KCFCSDT-------VRDFLDMSD 223
Query: 246 LADG----------CIAYNLGNGKGISVLEMVAAFEKASGKKI--PIKFCPRRVGDATAV 293
+N+ G+G S+ E+ G + P+ D +V
Sbjct: 224 FLAIADLSLQEGRPTGVFNVSTGEGHSIKEVFDVVLDYVGATLAEPVPVVAPGADDVPSV 283
Query: 294 YAATDKAHKELGWKPKYGIEDMCAHQWNWAKN 325
K E GWK K +D Q W
Sbjct: 284 VLDPSKTETEFGWKAKVDFKDTITGQLAWYDK 315
|
| >2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A* Length = 311 | Back alignment and structure |
|---|
Score = 329 bits (846), Expect = e-113
Identities = 97/331 (29%), Positives = 153/331 (46%), Gaps = 32/331 (9%)
Query: 6 NILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVG 65
+LVTGGAGFIG+H LL G +V ++DNL E V K + F
Sbjct: 2 RVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKRENVP-----------KGVPFFRV 50
Query: 66 DLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCK 125
DLR+K+ +++ F + V H A +V SV+ P F+ NL+G +NL +A +Y +
Sbjct: 51 DLRDKEGVERAFREFRPTHVSHQAAQASVKVSVEDPVLDFEVNLLGGLNLLEACRQYGVE 110
Query: 126 KLVFSSS-ATIYG-QPEKIPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKADPEWRIILLR 183
KLVF+S+ IYG PE E +P +PY +K E ++ + + LR
Sbjct: 111 KLVFASTGGAIYGEVPEGERAEETWPPRPKSPYAASKAAFEHYLSVYGQSYG-LKWVSLR 169
Query: 184 YFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAVRDYIHV 243
Y N G +DP G ++ + + P + +Y + P D VRDY++V
Sbjct: 170 YGNVYGP------RQDPHG-EAGVVAIFAERVLKGLP-VTLYARKTPG-DEGCVRDYVYV 220
Query: 244 MDLAD--------GCIAYNLGNGKGISVLEMVAAFEKASGKKIPIKFCPRRVGDATAVYA 295
D+A+ YN+G G+G + E++ A +A+GK ++ P R GD
Sbjct: 221 GDVAEAHALALFSLEGIYNVGTGEGHTTREVLMAVAEAAGKAPEVQPAPPRPGDLERSVL 280
Query: 296 ATDKAHKELGWKPKYGIEDMCAHQWNWAKNN 326
+ K GW+PK G ++ + +
Sbjct: 281 SPLKL-MAHGWRPKVGFQEGIRLTVDHFRGA 310
|
| >3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} Length = 313 | Back alignment and structure |
|---|
Score = 294 bits (755), Expect = 4e-99
Identities = 82/335 (24%), Positives = 137/335 (40%), Gaps = 47/335 (14%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHV 64
I+VTGGAGFIG+H +L + ++V+IDNL + E V+ +
Sbjct: 2 SLIVVTGGAGFIGSHVVDKLSESN-EIVVIDNLSSGNEEFVN-----------EAARLVK 49
Query: 65 GDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNC 124
DL D D L E V H A V ++P + NN++ T L +AM K
Sbjct: 50 ADLAADDIKDYLK---GAEEVWHIAANPDVRIGAENPDEIYRNNVLATYRLLEAMRKAGV 106
Query: 125 KKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKADPEWRIILLRY 184
++VF+S++T+YG+ + IP ED+P ++ YG +K CE + + + + R+
Sbjct: 107 SRIVFTSTSTVYGEAKVIPTPEDYPTHPISLYGASKLACEALIESYCHTF-DMQAWIYRF 165
Query: 185 FNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAVRDYIHVM 244
N +G I +I ++ L + G +G + YI++
Sbjct: 166 ANVIGRR------STHGVIY----DFIMKLKRNPEE-LEILG------NGEQNKSYIYIS 208
Query: 245 DLADGCI----------AYNLGNGKGISVLEMVAAFEKASGKKIPIKFCP---RRVGDAT 291
D D + +N+G+ I V + + G +F GD
Sbjct: 209 DCVDAMLFGLRGDERVNIFNIGSEDQIKVKRIAEIVCEELGLSPRFRFTGGDRGWKGDVP 268
Query: 292 AVYAATDKAHKELGWKPKYGIEDMCAHQWNWAKNN 326
+ + +K K LGWKP+Y E+ +
Sbjct: 269 VMLLSIEKL-KRLGWKPRYNSEEAVRMAVRDLVED 302
|
| >3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} PDB: 3icp_A* 3aw9_A* Length = 312 | Back alignment and structure |
|---|
Score = 290 bits (744), Expect = 1e-97
Identities = 87/342 (25%), Positives = 144/342 (42%), Gaps = 56/342 (16%)
Query: 6 NILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVG 65
I+VTGGAGFIG+H +L++ G++VV++DNL + E V+ E HV
Sbjct: 2 RIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREFVN-----------PSAELHVR 50
Query: 66 DLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCK 125
DL++ + K + V HF A V S P +F+ N++ T N+ + + +
Sbjct: 51 DLKDYSWGAGI----KGDVVFHFAANPEVRLSTTEPIVHFNENVVATFNVLEWARQTGVR 106
Query: 126 KLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKA-DPEWRIILLRY 184
+VF+SS+T+YG + IP E+ PY ++ YG K E + + +RY
Sbjct: 107 TVVFASSSTVYGDADVIPTPEEEPYKPISVYGAAKAAGEVMCATYARLFGVRCLA--VRY 164
Query: 185 FNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAVRDYIHVM 244
N VG + D +I ++ + L V G DG+ + Y++V
Sbjct: 165 ANVVGPRLRHGVIYD----------FIMKLRRNPNV-LEVLG------DGTQRKSYLYVR 207
Query: 245 DLADGCI--------------AYNLGNGKGISVLEMVAAFEKASGKKIPIKFCPRRV--- 287
D + + A N+GN + VL++ + G + I+ P
Sbjct: 208 DAVEATLAAWKKFEEMDAPFLALNVGNVDAVRVLDIAQIVAEVLGLRPEIRLVPSTPDGR 267
Query: 288 ---GDATAVYAATDKAHKELGWKPKYGIED-MCAHQWNWAKN 325
GD + A K K GW+P + + + AK
Sbjct: 268 GWPGDVKYMTLAVTKLMKLTGWRPTMTSAEAVKKTAEDLAKE 309
|
| >1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A* Length = 404 | Back alignment and structure |
|---|
Score = 289 bits (741), Expect = 5e-96
Identities = 86/374 (22%), Positives = 141/374 (37%), Gaps = 62/374 (16%)
Query: 7 ILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHN----------------SVPEAVDRVKD 50
++V GG G+ G AL L + ++V ++DNL S+ + + R K
Sbjct: 14 VMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKA 73
Query: 51 LAGPELAKKLEFHVGDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESV---QHPFRYFDN 107
L G K +E +VGD+ + + L + F S + ++V+HFG ++ S+ N
Sbjct: 74 LTG----KSIELYVGDICDFEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHN 129
Query: 108 NLIGTINLYQAMAKYNCK-KLVFSSSATIYGQPEK------IPCVED-------FPYGAM 153
N+IGT+N+ A+ ++ + LV + YG P I + +P A
Sbjct: 130 NVIGTLNVLFAIKEFGEECHLVKLGTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQAS 189
Query: 154 NPYGRTKQWCEEIAFDVQKADPEWRIILLRYFN-------PVGAHESGKLGEDPKGIPNN 206
+ Y +K KA R L HE + D +
Sbjct: 190 SFYHLSKVHDSHNIAFTCKAW-GIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAVFGT 248
Query: 207 -LMPYIQQVAVGRHPELNVYGQDYPTKDGSAVRDYIHVMDLA-------DGCIAYNLGNG 258
L + Q AVG L VYG+ T+ +RD + +++A +N
Sbjct: 249 ALNRFCVQAAVGH--PLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAKAGEFRVFNQFTE 306
Query: 259 KGISVLEMVAAFEKASGK-----KIPIKFCPRRVGDATAVYAATDKAHKELGWKPKYGIE 313
+ SV E+ + KA K K PR + Y A ELG +P Y +
Sbjct: 307 Q-FSVNELASLVTKAGSKLGLDVKKMTVPNPRVEAEE-HYYNAKHTKLMELGLEPHYLSD 364
Query: 314 DMCAHQWNWAKNNP 327
+ N+A
Sbjct: 365 SLLDSLLNFAVQFK 378
|
| >2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} Length = 342 | Back alignment and structure |
|---|
Score = 258 bits (662), Expect = 7e-85
Identities = 69/340 (20%), Positives = 119/340 (35%), Gaps = 43/340 (12%)
Query: 6 NILVTGGAGFIGTHCALQLLQGGF-------KVVLIDNLHNSVPEAVDRVKDLAGPELAK 58
+I + G AG +G +L++ G K LID P
Sbjct: 16 HIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPAGFSG----------- 64
Query: 59 KLEFHVGDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQA 118
++ DL + +KL + + + H A+ E+ + + NL GT L+ A
Sbjct: 65 AVDARAADLSAPGEAEKLVE-ARPDVIFHLAAI-VSGEAELDFDKGYRINLDGTRYLFDA 122
Query: 119 MAKYNCK-----KLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKA 173
+ N K ++VF+SS ++G P P ++F + YG K CE + D +
Sbjct: 123 IRIANGKDGYKPRVVFTSSIAVFGAPLPYPIPDEFHTTPLTSYGTQKAICELLLSDYSRR 182
Query: 174 DPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQ--DYPT 231
+ I +R GK G +N+ +++ VG+ L V +
Sbjct: 183 G-FFDGIGIRLPT--ICIRPGKPNAAASGFFSNI---LREPLVGQEAVLPVPESIRHWHA 236
Query: 232 KDGSAVRDYIHVMDLADGCIA---YNLGNGKGISVLEMVAAFEKASGKKIPIKFCPRRVG 288
SAV IH + + G +V E + A K +G+K R
Sbjct: 237 SPRSAVGFLIHGAMIDVEKVGPRRNLSMPGLSATVGEQIEALRKVAGEKAV-ALIRREPN 295
Query: 289 DATAVYAAT------DKAHKELGWKPKYGIEDMCAHQWNW 322
+ K +ELG+ + E++
Sbjct: 296 EMIMRMCEGWAPGFEAKRARELGFTAESSFEEIIQVHIED 335
|
| >1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* Length = 352 | Back alignment and structure |
|---|
Score = 241 bits (617), Expect = 5e-78
Identities = 86/355 (24%), Positives = 132/355 (37%), Gaps = 59/355 (16%)
Query: 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLE 61
A K L+TG AGFIG++ LL+ KVV +DN +D V+ L + +
Sbjct: 25 AQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFK 84
Query: 62 FHVGDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAK 121
F GD+RN DD + + V+H AL +V S+ P N+ G +N+ A
Sbjct: 85 FIQGDIRNLDDCNNAC--AGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARD 142
Query: 122 YNCKKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQWCEEIA------FDVQKADP 175
+ +++S++ YG +P VED ++PY TK E A +
Sbjct: 143 AKVQSFTYAASSSTYGDHPGLPKVEDTIGKPLSPYAVTKYVNELYADVFSRCYGFS---- 198
Query: 176 EWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPY-------IQQVAVGRHPELNVYGQD 228
I LRYFN G + PN Y + G ++ + G
Sbjct: 199 ---TIGLRYFNVFG----------RRQDPN--GAYAAVIPKWTSSMIQGD--DVYING-- 239
Query: 229 YPTKDGSAVRDYIHVMDLADGCIA------------YNLGNGKGISVLEMVAAFEKASGK 276
DG RD+ ++ + + YN+ G S+ ++ A +
Sbjct: 240 ----DGETSRDFCYIENTVQANLLAATAGLDARNQVYNIAVGGRTSLNQLFFALRDGLAE 295
Query: 277 K-----IPIKFCPRRVGDATAVYAATDKAHKELGWKPKYGIEDMCAHQWNWAKNN 326
+ R GD A KA K LG+ PKY + A W
Sbjct: 296 NGVSYHREPVYRDFREGDVRHSLADISKAAKLLGYAPKYDVSAGVALAMPWYIMF 350
|
| >3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} Length = 311 | Back alignment and structure |
|---|
Score = 238 bits (609), Expect = 3e-77
Identities = 65/339 (19%), Positives = 113/339 (33%), Gaps = 64/339 (18%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHV 64
I VTGG GF+G + + G +++ G + E+ V
Sbjct: 3 LKIAVTGGTGFLGQYVVESIKNDGNTPIILTRS--------------IGNKAINDYEYRV 48
Query: 65 GDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNC 124
D D + +AV+H A + Q F +N I T NLY A + N
Sbjct: 49 SDYT---LEDLINQLNDVDAVVHLAATR----GSQGKISEFHDNEILTQNLYDACYENNI 101
Query: 125 KKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQWCEEIA------FDVQKADPEWR 178
+V++S+ + Y +P E YG +K CE I +
Sbjct: 102 SNIVYASTISAYSDETSLPWNEKELPLPDLMYGVSKLACEHIGNIYSRKKGL-------C 154
Query: 179 IILLRYFNPVGAHESGKLGEDPKGIPNNLMP-YIQQVAVGRHPELNVYGQDYPTKDGSAV 237
I LR+ + G N ++ + +Q G +L ++ + A
Sbjct: 155 IKNLRFAHLYG----------FNEKNNYMINRFFRQAFHGE--QLTLHA------NSVAK 196
Query: 238 RDYIHVMDLADGCIA----------YNLGNGKGISVLEMVAAFEKASGKKIPIKFC-PRR 286
R++++ D A I +N+G+G ++ E+ A G K + P
Sbjct: 197 REFLYAKDAAKSVIYALKQEKVSGTFNIGSGDALTNYEVANTINNAFGNKDNLLVKNPNA 256
Query: 287 VGDATAVYAATDKAHKELGWKPKYGIEDMCAHQWNWAKN 325
+ Y + KA + L + Y +
Sbjct: 257 NEGIHSSYMDSSKAKELLDFSTDYNFATAVEEIHLLMRG 295
|
| >3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* Length = 351 | Back alignment and structure |
|---|
Score = 235 bits (602), Expect = 1e-75
Identities = 81/356 (22%), Positives = 133/356 (37%), Gaps = 59/356 (16%)
Query: 1 MASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKL 60
+ S K L+TG AGFIG++ +LL+ V+ +DN +D VK L E +
Sbjct: 22 IFSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRF 81
Query: 61 EFHVGDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMA 120
F GD+R+ +++ + + V+H AL +V S+ P N+ G +N+ A
Sbjct: 82 CFIEGDIRDLTTCEQVM--KGVDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAK 139
Query: 121 KYNCKKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQWCEEIA------FDVQKAD 174
+ +++S++ YG +P VE+ ++PY TK E A +
Sbjct: 140 NAQVQSFTYAASSSTYGDHPALPKVEENIGNPLSPYAVTKYVNEIYAQVYARTYGF---- 195
Query: 175 PEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPY-------IQQVAVGRHPELNVYGQ 227
+ I LRYFN G + PN Y + G + G
Sbjct: 196 ---KTIGLRYFNVFG----------RRQDPN--GAYAAVIPKWTAAMLKGDDV--YING- 237
Query: 228 DYPTKDGSAVRDYIHVMDLADGCI------------AYNLGNGKGISVLEMVAAFEKASG 275
DG RD+ ++ ++ I YN+ G ++ E+
Sbjct: 238 -----DGETSRDFCYIDNVIQMNILSALAKDSAKDNIYNVAVGDRTTLNELSGYIYDELN 292
Query: 276 -----KKIPIKFCPRRVGDATAVYAATDKAHKELGWKPKYGIEDMCAHQWNWAKNN 326
K+ IK+ R GD A KA L ++P I + W
Sbjct: 293 LIHHIDKLSIKYREFRSGDVRHSQADVTKAIDLLKYRPNIKIREGLRLSMPWYVRF 348
|
| >2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} Length = 333 | Back alignment and structure |
|---|
Score = 231 bits (592), Expect = 2e-74
Identities = 70/336 (20%), Positives = 124/336 (36%), Gaps = 55/336 (16%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHV 64
K + +TG G IG+H A LL+ G KVV IDN E + L F
Sbjct: 22 KKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREHLKD---------HPNLTFVE 72
Query: 65 GDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNC 124
G + + +++L + +AV+H A + + N +G N+ QA K N
Sbjct: 73 GSIADHALVNQLIGDLQPDAVVHTAAS---YKDPDDWYNDTLTNCVGGSNVVQAAKKNNV 129
Query: 125 KKLVFSSSATIYG-QPEKIPCVEDFPYGAMN-PYGRTKQWCEEIA--FDVQKADPEWRII 180
+ V+ +A YG +P + P D P N Y +K E+ + +
Sbjct: 130 GRFVYFQTALCYGVKPIQQPVRLDHPRNPANSSYAISKSANEDYLEYSGL-------DFV 182
Query: 181 LLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAVRDY 240
R N VG P+ + L + Q+++ G+ A RD+
Sbjct: 183 TFRLANVVG----------PRNVSGPLPIFFQRLSEGK-----------KCFVTKARRDF 221
Query: 241 IHVMDLADGCI---------AYNLGNGKGISVLEMVAAFEKASGKKIPIK--FCPRRVGD 289
+ V DLA + AY+ +G +++ E+ A +A + D
Sbjct: 222 VFVKDLARATVRAVDGVGHGAYHFSSGTDVAIKELYDAVVEAMALPSYPEPEIRELGPDD 281
Query: 290 ATAVYAATDKAHKELGWKPKYGIEDMCAHQWNWAKN 325
A ++ + ++ G +++ A + +
Sbjct: 282 APSILLDPSRTIQDFGKIEFTPLKETVAAAVAYFRE 317
|
| >3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis} Length = 321 | Back alignment and structure |
|---|
Score = 213 bits (545), Expect = 2e-67
Identities = 82/343 (23%), Positives = 135/343 (39%), Gaps = 46/343 (13%)
Query: 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEF 62
+ IL+TGGAGFIG H A L+ G +V ++D+L + LE
Sbjct: 6 LKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTGKFLE---KPVLEL 62
Query: 63 HVGDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKY 122
DL + V H + K+V S + P Y DN + +L
Sbjct: 63 EERDLSD------------VRLVYHLASHKSVPRSFKQPLDYLDN-VDSGRHLLALCTSV 109
Query: 123 NCKKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKADPEWRIILL 182
K+V S+ +YGQ + +P ED P +PY +K E +A Q+A + ++
Sbjct: 110 GVPKVVVGSTCEVYGQADTLPTPEDSPLSPRSPYAASKVGLEMVAGAHQRASVAPEVGIV 169
Query: 183 RYFNPVGAHESGKLGEDPKGIPNNLMP-YIQQVAVGRHPELNVYGQDYPTKDGSAVRDYI 241
R+FN G P P+ L+P + EL V G DG RD+
Sbjct: 170 RFFNVYG----------PGERPDALVPRLCANLLTRN--ELPVEG------DGEQRRDFT 211
Query: 242 HVMDLADGCIA---------YNLGNGKGISVLEMVAAFEKASGKKIPIKFCPRRVGDATA 292
++ D+ D +A N G+G+ +SV +++ + + R + T
Sbjct: 212 YITDVVDKLVALANRPLPSVVNFGSGQSLSVNDVIRILQAT-SPAAEVARKQPRPNEITE 270
Query: 293 VYAATDKAHKELGWKP-KYGIEDMCAHQWNWAKNNPMGYQTKR 334
A T +++G + GIE+ W ++ + +R
Sbjct: 271 FRADTALQTRQIGERSGGIGIEEGIRLTLEWWQSRDLDDIRQR 313
|
| >3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori} Length = 362 | Back alignment and structure |
|---|
Score = 212 bits (541), Expect = 2e-66
Identities = 68/326 (20%), Positives = 124/326 (38%), Gaps = 36/326 (11%)
Query: 3 SEKNILVTGGAGFIGTHCALQLLQGGF--KVVLIDNLHNSVPEAVDRVKDLAGPE--LAK 58
+ IL+TGGAGF+G++ A + KVV++D ++ + +R L + +
Sbjct: 9 ENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGF 68
Query: 59 KLEFHVGDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQA 118
K E D+ N DL +L F+ + H A+ ++ + N +NL +
Sbjct: 69 KGEVIAADINNPLDLRRLEK-LHFDYLFHQAAVSDT--TMLNQELVMKTNYQAFLNLLEI 125
Query: 119 MAKYNCKKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKADPEWR 178
K ++++SSA +YG + P V N YG +K +E D
Sbjct: 126 ARSKKAK-VIYASSAGVYGNTK-APNVVGKNESPENVYGFSKLCMDEFVLS-HSNDNVQ- 181
Query: 179 IILLRYFNPVGAHESGKLGEDPKGIPNNLMP-YIQQVAVGRHPELNVYGQDYPTKDGSAV 237
+ LRYFN G E K +++ + +L + G +
Sbjct: 182 -VGLRYFNVYGPRE------FYKEKTASMVLQLALGAMAFKEVKLF--------EFGEQL 226
Query: 238 RDYIHVMDLADGCIA---------YNLGNGKGISVLEMVAAFEKASGKKIPIKFCPRRVG 288
RD++++ D+ + YN+G + S E+V+ ++ G
Sbjct: 227 RDFVYIEDVIQANVKAMKAQKSGVYNVGYSQARSYNEIVSILKEHLGDFKVTYIKNPYAF 286
Query: 289 DATAVYAATDKAHKELGWKPKYGIED 314
A + +L + P Y +E
Sbjct: 287 FQKHTQAHIEPTILDLDYTPLYDLES 312
|
| >1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2 Length = 310 | Back alignment and structure |
|---|
Score = 204 bits (521), Expect = 4e-64
Identities = 74/340 (21%), Positives = 119/340 (35%), Gaps = 52/340 (15%)
Query: 7 ILVTGGAGFIGTHCALQLLQGGF-KVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVG 65
I+VTGGAGFIG++ L G ++++DNL + + +L L
Sbjct: 2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDG-----TKFVNLVD--LNIADYMDKE 54
Query: 66 DLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCK 125
D + + F EA+ H GA + E DNN + L +
Sbjct: 55 DFLIQIMAGEEF--GDVEAIFHEGACSSTTEWDGKY--MMDNNYQYSKELLHYCLEREIP 110
Query: 126 KLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQWCEEIAFD-VQKADPEWRIILLRY 184
+++SSA YG +N YG +K +E + +A+ + + RY
Sbjct: 111 -FLYASSAATYGGRTSDFIESREYEKPLNVYGYSKFLFDEYVRQILPEANSQI--VGFRY 167
Query: 185 FNPVGAHESGKLGEDPKG-----IPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAVRD 239
FN G E KG + Q+ G P+L G + RD
Sbjct: 168 FNVYGPR------EGHKGSMASVAFHL----NTQLNNGESPKL-FEG------SENFKRD 210
Query: 240 YIHVMDLADGCIA---------YNLGNGKGISVLEMVAAFEKASGKKIPIKFCPR----R 286
+++V D+AD + +NLG G+ S + A A KK I++ P +
Sbjct: 211 FVYVGDVADVNLWFLENGVSGIFNLGTGRAESFQAVADAT-LAYHKKGQIEYIPFPDKLK 269
Query: 287 VGDATAVYAATDKAHKELGWKPKYGIEDMCAHQWNWAKNN 326
A KP + + W +
Sbjct: 270 GRYQAFTQADLTNLRAAGYDKPFKTVAEGVTEYMAWLNRD 309
|
| >2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* Length = 377 | Back alignment and structure |
|---|
Score = 206 bits (526), Expect = 5e-64
Identities = 76/353 (21%), Positives = 141/353 (39%), Gaps = 55/353 (15%)
Query: 3 SEKNILVTGGAGFIGTHCALQLLQGGF-KVVLIDNLHNSVPEAVDRVKDLAGPELAKKLE 61
+ N++V GGAGF+G++ +LL+ G +V ++DNL ++ V +
Sbjct: 31 ANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKINVPD---------HPAVR 81
Query: 62 FHVGDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAK 121
F + + L L +++ V H S+ P +NN + T+ LY+ +
Sbjct: 82 FSETSITDDALLASLQ--DEYDYVFHLATYHGNQSSIHDPLADHENNTLTTLKLYERLKH 139
Query: 122 YN-CKKLVFSSSATIYGQPEKIPCVED------FPYGAMNPYGRTKQWCEEIAFDVQKAD 174
+ KK+V+S++ + + +PY +K + E +
Sbjct: 140 FKRLKKVVYSAAGCSIAEKTFDDAKATEETDIVSLHNNDSPYSMSKIFGEFYSVY----- 194
Query: 175 PEWR------IILLRYFN---PVGAHESGKLGEDPKGIPNNLMP-YIQQVAVGRHPELNV 224
+ + R+ N P +G+ P + N+ P +I + G L +
Sbjct: 195 --YHKQHQLPTVRARFQNVYGPGEILGAGRWRGTPATVWRNVTPTFIYKALKGM--PLPL 250
Query: 225 YGQDYPTKDGSAVRDYIHVMDLADGCIA----------YNLGNGKGISVLEMVAAFEKAS 274
G A RD+I V D+A+G IA YN+ +GK S+ ++ + +
Sbjct: 251 EN------GGVATRDFIFVEDVANGLIACAADGTPGGVYNIASGKETSIADLATKINEIT 304
Query: 275 GKKIPIKFCPRRVGD-ATAVYAATDKAHKELGWKPKYGIEDMCAHQWNWAKNN 326
G + P+R D + + + +KA +ELG+ I+D W K N
Sbjct: 305 GNNTELDRLPKRPWDNSGKRFGSPEKARRELGFSADVSIDDGLRKTIEWTKAN 357
|
| >3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* Length = 317 | Back alignment and structure |
|---|
Score = 199 bits (509), Expect = 3e-62
Identities = 57/350 (16%), Positives = 119/350 (34%), Gaps = 56/350 (16%)
Query: 7 ILVTGGAGFIGTHCALQLL-QGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVG 65
ILVTG +G IGT L + G K V+ ++ + +F
Sbjct: 2 ILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDTGGI---------------KFITL 46
Query: 66 DLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCK 125
D+ N+D++D+ +A+ H + A+ + P + N+ GT N+ +A ++ +
Sbjct: 47 DVSNRDEIDRAVEKYSIDAIFHLAGI-LSAKGEKDPALAYKVNMNGTYNILEAAKQHRVE 105
Query: 126 KLVFSSSATIYG-QPEKIPCVEDFPYGAMNPYGRTKQWCEEIAFD-VQKADPEWRIILLR 183
K+V S+ ++G + K +G TK E + +K + R LR
Sbjct: 106 KVVIPSTIGVFGPETPKNKVPSITITRPRTMFGVTKIAAELLGQYYYEKFGLDVRS--LR 163
Query: 184 YFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAV-GRHPELNVYGQDYPTKDGSAVRDYIH 242
Y + +P + I AV + + + ++
Sbjct: 164 YPGIISYK------AEPTAGTTDYAVEIFYYAVKREKYKCYL--------APNRALPMMY 209
Query: 243 VMDLADGCI--------------AYNLGNGKGISVLEMVAAFEKASGKKIPIKFCPRRVG 288
+ D + YN+ + E+ + ++ + I++
Sbjct: 210 MPDALKALVDLYEADRDKLVLRNGYNVT-AYTFTPSELYSKIKERIP-EFEIEYKEDFRD 267
Query: 289 DATAVY---AATDKAHKELGWKPKYGIEDMCAHQWNWAKNNPMGYQTKRT 335
A + + +A E G+ +Y ++ + +G + K
Sbjct: 268 KIAATWPESLDSSEASNEWGFSIEYDLDRTIDDMIDHISEK-LGIEGKHA 316
|
| >2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A* Length = 357 | Back alignment and structure |
|---|
Score = 199 bits (509), Expect = 1e-61
Identities = 73/342 (21%), Positives = 120/342 (35%), Gaps = 52/342 (15%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGGF-KVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFH 63
+ I+VTGGAGFIG++ L G ++++DNL + + +L L
Sbjct: 47 RMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDG-----TKFVNLVD--LNIADYMD 99
Query: 64 VGDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYN 123
D + + F EA+ H GA + E DNN + L +
Sbjct: 100 KEDFLIQIMAGEEF--GDVEAIFHEGACSSTTEWDGKY--MMDNNYQYSKELLHYCLERE 155
Query: 124 CKKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQWCEEIAFD-VQKADPEWRIILL 182
+++SSA YG +N +G +K +E + +A+ + +
Sbjct: 156 IP-FLYASSAATYGGRTSDFIESREYEKPLNVFGYSKFLFDEYVRQILPEANSQI--VGF 212
Query: 183 RYFNPVGAHESGKLGEDPKG-----IPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAV 237
RYFN G E KG + Q+ G P+L G +
Sbjct: 213 RYFNVYGPR------EGHKGSMASVAFHL----NTQLNNGESPKL-FEG------SENFK 255
Query: 238 RDYIHVMDLADGCIA---------YNLGNGKGISVLEMVAAFEKASGKKIPIKFCPR--- 285
RD+++V D+AD + +NLG G+ S + A A KK I++ P
Sbjct: 256 RDFVYVGDVADVNLWFLENGVSGIFNLGTGRAESFQAVADAT-LAYHKKGQIEYIPFPDK 314
Query: 286 -RVGDATAVYAATDKAHKELGWKPKYGIEDMCAHQWNWAKNN 326
+ A KP + + W +
Sbjct: 315 LKGRYQAFTQADLTNLRAAGYDKPFKTVAEGVTEYMAWLNRD 356
|
| >2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris} Length = 312 | Back alignment and structure |
|---|
Score = 172 bits (437), Expect = 2e-51
Identities = 54/343 (15%), Positives = 104/343 (30%), Gaps = 60/343 (17%)
Query: 5 KNILVTGGAGFIGTHCALQLLQ-GGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFH 63
IL+ G G IGT +L + G + V+ ++ ++ F
Sbjct: 3 PKILIIGACGQIGTELTQKLRKLYGTENVIASDIRK------------LNTDVVNSGPFE 50
Query: 64 VGDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYN 123
V + + + ++ L K + AL A + ++P +D N+ ++
Sbjct: 51 VVNALDFNQIEHLVEVHKITDIYLMAAL-LSATAEKNPAFAWDLNMNSLFHVLNLAKAKK 109
Query: 124 CKKLVFSSSATIYGQPEKIPCVEDFPYGAMNP---YGRTKQWCEEIA------FDVQKAD 174
KK+ + SS ++G + M P YG +KQ E + V
Sbjct: 110 IKKIFWPSSIAVFGPTTPKENTPQYT--IMEPSTVYGISKQAGERWCEYYHNIYGV---- 163
Query: 175 PEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDG 234
+ R +RY + P G + I A+ + +
Sbjct: 164 -DVRS--IRYPGLISWS------TPPGGGTTDYAVDIFYKAI-ADKKYECFL------SS 207
Query: 235 SAVRDYIHVMDLADGCI--------------AYNLGNGKGISVLEMVAAFEKASGKKIPI 280
+++ D D I +YNL + I
Sbjct: 208 ETKMPMMYMDDAIDATINIMKAPVEKIKIHSSYNLAAMSFTPTEIANEIKKHIPEFTITY 267
Query: 281 KFCPR-RVGDATAVYAATDKAHKELGWKPKYGIEDMCAHQWNW 322
+ R ++ D+ +A ++ WK + +E M
Sbjct: 268 EPDFRQKIADSWPASIDDSQAREDWDWKHTFDLESMTKDMIEH 310
|
| >2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* Length = 379 | Back alignment and structure |
|---|
Score = 162 bits (412), Expect = 4e-47
Identities = 68/340 (20%), Positives = 122/340 (35%), Gaps = 62/340 (18%)
Query: 1 MASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKL 60
+ I +TG GFI +H A +L G V+ D E + E
Sbjct: 26 PSENLKISITGAGGFIASHIARRLKHEGHYVIASDWKK---NEHMT--------EDMFCD 74
Query: 61 EFHVGDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQ-HPFRYFDNNLIGTINLYQAM 119
EFH+ DLR ++ K+ + + V + A +Q + NN + + N+ +A
Sbjct: 75 EFHLVDLRVMENCLKVT--EGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAA 132
Query: 120 AKYNCKKLVFSSSATIYGQPEKIPCVEDFPY-GAMNP------YGRTKQWCEEIAFDVQK 172
K+ ++SSA IY + +++ P +G K EE+ K
Sbjct: 133 RINGIKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAFGLEKLATEELCKHYNK 192
Query: 173 ADPEWRIILLRYFN---PVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDY 229
D + R+ N P G + G+ K + ++ ++G
Sbjct: 193 -DFGIECRIGRFHNIYGPFGTWKGGR----EKAPAA----FCRKAQTSTDR-FEMWG--- 239
Query: 230 PTKDGSAVRDYIHVMDLADGCIA---------YNLGNGKGISVLEMVAAFEKASGKKIPI 280
DG R + + + +G + N+G+ + +S+ EM KK+PI
Sbjct: 240 ---DGLQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEMVLSFEEKKLPI 296
Query: 281 KFCP------RRVGDATAVYAATDKAHKELGWKPKYGIED 314
P R D + ++LGW P +++
Sbjct: 297 HHIPGPEGVRGRNSD-------NNLIKEKLGWAPNMRLKE 329
|
| >3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} Length = 267 | Back alignment and structure |
|---|
Score = 158 bits (402), Expect = 7e-47
Identities = 53/251 (21%), Positives = 90/251 (35%), Gaps = 54/251 (21%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHV 64
+LVTG AG +G+ L +V L D + EA + E
Sbjct: 3 NRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAAEAHE--------------EIVA 48
Query: 65 GDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFR-YFDNNLIGTINLYQAMAKYN 123
DL + + L + + +IH G + SV+ P+ N+IG NLY+A
Sbjct: 49 CDLADAQAVHDLV--KDCDGIIHLGGV-----SVERPWNDILQANIIGAYNLYEAARNLG 101
Query: 124 CKKLVFSSSATIYG-QPEKIPCVEDFPYGAMNPYGRTKQWCEEIA------FDVQKADPE 176
++VF+SS G P + P + YG +K + E++A FD++
Sbjct: 102 KPRIVFASSNHTIGYYPRTTRIDTEVPRRPDSLYGLSKCFGEDLASLYYHKFDIE----- 156
Query: 177 WRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGR---HPELN---VYGQDYP 230
+ +R + +D + + L + R P+L VYG
Sbjct: 157 --TLNIRIGSCFPKP------KDARMMATWLSVDDFMRLMKRAFVAPKLGCTVVYG---- 204
Query: 231 TKDGSAVRDYI 241
+ +
Sbjct: 205 --ASANTESWW 213
|
| >3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* Length = 267 | Back alignment and structure |
|---|
Score = 145 bits (369), Expect = 6e-42
Identities = 45/253 (17%), Positives = 81/253 (32%), Gaps = 54/253 (21%)
Query: 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEF 62
+ K +LVTG AG +G +L + L D E
Sbjct: 2 AMKRLLVTGAAGQLGRVMRERLAPMAEILRLADL--------------SPLDPAGPNEEC 47
Query: 63 HVGDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFR-YFDNNLIGTINLYQAMAK 121
DL + + ++ + + ++H G SV+ PF N+IG NLY+A
Sbjct: 48 VQCDLADANAVNAMV--AGCDGIVHLG-----GISVEKPFEQILQGNIIGLYNLYEAARA 100
Query: 122 YNCKKLVFSSSATIYGQ-PEKIPCVEDFPYGAMNPYGRTKQWCEEIA------FDVQKAD 174
+ ++VF+SS G P+ D P YG +K + E +A F
Sbjct: 101 HGQPRIVFASSNHTIGYYPQTERLGPDVPARPDGLYGVSKCFGENLARMYFDKFGQ---- 156
Query: 175 PEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMP--YIQQVAVGRHPELN----VYGQD 228
L+R + + + + ++ + + V+G
Sbjct: 157 ---ETALVRIGSCTPEP------NNYRMLSTWFSHDDFVSLIEAVFRAPVLGCPVVWG-- 205
Query: 229 YPTKDGSAVRDYI 241
+ +
Sbjct: 206 ----ASANDAGWW 214
|
| >2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} Length = 342 | Back alignment and structure |
|---|
Score = 140 bits (354), Expect = 5e-39
Identities = 54/372 (14%), Positives = 107/372 (28%), Gaps = 84/372 (22%)
Query: 1 MASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKL 60
+ V G G +G H A + G +VLI + R+ L +
Sbjct: 10 PGAHVKYAVLGATGLLGHHAARAIRAAGHDLVLIHR----PSSQIQRLAYL-------EP 58
Query: 61 EFHVGDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMA 120
E V ++ + L++ + + VI + + L T Y A
Sbjct: 59 ECRVAEMLDHAGLERAL--RGLDGVIFSAGY--YPSRPRRWQEEVASALGQTNPFYAACL 114
Query: 121 KYNCKKLVF-SSSATIYGQPEKIPCVEDFPY----GAMNPYGRTKQWCEEIAFDVQKADP 175
+ ++++ S+ + P+ +P E Y + Y K +E A + +
Sbjct: 115 QARVPRILYVGSAYAMPRHPQGLPGHEGLFYDSLPSGKSSYVLCKWALDEQAREQARNGL 174
Query: 176 EWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGS 235
+++ +G D + I + G +
Sbjct: 175 P--VVIGIPGMVLGEL-------DIGPTTGRV---ITAIGNGEMTHY-----------VA 211
Query: 236 AVRDYIHVMDLADGCIA----------YNLGNGKGISVLEMVAAFEKASGKKIPIKFCPR 285
R+ I + G + Y L G + + ++ + G+ P
Sbjct: 212 GQRNVIDAAEAGRGLLMALERGRIGERYLLT-GHNLEMADLTRRIAELLGQPAPQPM-SM 269
Query: 286 RVGDATAVYAAT---------------------------DKAHKELGWKPKYGIEDMCAH 318
+ A A KA +ELG+ ++D
Sbjct: 270 AMARALATLGRLRYRVSGQLPLLDETAIEVMAGGQFLDGRKAREELGFFSTTALDDTLLR 329
Query: 319 QWNWAKNNPMGY 330
+W ++N GY
Sbjct: 330 AIDWFRDN--GY 339
|
| >1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2 Length = 347 | Back alignment and structure |
|---|
Score = 138 bits (351), Expect = 2e-38
Identities = 71/362 (19%), Positives = 130/362 (35%), Gaps = 62/362 (17%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLID------NLHNSVPEAVDRVKDLAGPELAK 58
+L+TGG GF+G++ A L G +++ D N L
Sbjct: 2 AKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDN-----------LHWLSSLG 50
Query: 59 KLEFHVGDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQA 118
EF GD+RNK+D+ +L + ++ H A+ S+ +P F+ N+ GT+NL +A
Sbjct: 51 NFEFVHGDIRNKNDVTRLITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEA 110
Query: 119 MAKYNCK-KLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQWCEEIAFD------VQ 171
+ +YN +++SS+ +YG E+ E + + E D
Sbjct: 111 VRQYNSNCNIIYSSTNKVYGDLEQYKYNETET--RYTCVDKPNGYDESTQLDFHSPYGCS 168
Query: 172 KADPE-----W------RIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHP 220
K + + ++ R+ + G + + + ++ P
Sbjct: 169 KGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQ--GWVGWFCQKAVEIKNGINKP 226
Query: 221 ELNVYGQDYPTKDGSAVRDYIHVMDLADGCIA------------YNLGNGKG--ISVLEM 266
+ G +G VRD +H D+ +N+G +S+LE+
Sbjct: 227 -FTISG------NGKQVRDVLHAEDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLEL 279
Query: 267 VAAFEKASGKKIPIKFCPRRVGDATAVYAA-TDKAHKELGWKPKYGIEDMCAHQWNWAKN 325
E + P R D V+ A K + W PK +D ++W +
Sbjct: 280 FKLLEDYCNIDMRFTNLPVRESD-QRVFVADIKKITNAIDWSPKVSAKDGVQKMYDWTSS 338
Query: 326 NP 327
Sbjct: 339 IL 340
|
| >2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A* Length = 343 | Back alignment and structure |
|---|
Score = 133 bits (337), Expect = 2e-36
Identities = 84/328 (25%), Positives = 135/328 (41%), Gaps = 52/328 (15%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHV 64
K IL+TGGAGF+G+H +L+ G +V ++DN V+ + E
Sbjct: 28 KRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIG------HENFELIN 81
Query: 65 GDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNC 124
D+ ++ + + H + + + +P + N IGT+N+ +AK
Sbjct: 82 HDVVEPLYIE-------VDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLG-LAKRVG 133
Query: 125 KKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQWC--------EEIAFDVQKA-DP 175
+L+ +S++ +YG PE P ED+ +G +NP G + C E + + K
Sbjct: 134 ARLLLASTSEVYGDPEVHPQSEDY-WGHVNPIG--PRACYDEGKRVAETMCYAYMKQEGV 190
Query: 176 EWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGS 235
E R+ R FN G D + + N +I Q G L VYG GS
Sbjct: 191 EVRVA--RIFNTFG---PRMHMNDGRVVSN----FILQALQGE--PLTVYG------SGS 233
Query: 236 AVRDYIHVMDLADGCIA---------YNLGNGKGISVLEMVAAFEKASGKKIPIKFCPRR 286
R + +V DL +G +A NLGN + ++LE + G I+F
Sbjct: 234 QTRAFQYVSDLVNGLVALMNSNVSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEA 293
Query: 287 VGDATAVYAATDKAHKELGWKPKYGIED 314
D KA LGW+P +E+
Sbjct: 294 QDDPQKRKPDIKKAKLMLGWEPVVPLEE 321
|
| >3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei} Length = 372 | Back alignment and structure |
|---|
Score = 132 bits (334), Expect = 6e-36
Identities = 67/349 (19%), Positives = 127/349 (36%), Gaps = 64/349 (18%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHV 64
K +L+ G GFIG H + ++L+ V ++ DR+ DL E ++ F
Sbjct: 25 KKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQT------DRLGDLVKHE---RMHFFE 75
Query: 65 GDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNC 124
GD+ + + +K + ++ A+ A V+ P R F+ + + + ++ KY
Sbjct: 76 GDITINKEWVEYH-VKKCDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYG- 133
Query: 125 KKLVFSSSATIYGQ---PEKIPCVEDFPYGAMNP----YGRTKQWCEEIAFDVQKADPEW 177
K LVF S++ +YG + P YG +N Y +KQ + + + +
Sbjct: 134 KHLVFPSTSEVYGMCADEQFDPDASALTYGPINKPRWIYACSKQLMDRVIWGYGMEGLNF 193
Query: 178 RIILLRYFNPVG---AHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDG 234
+ R FN +G + + ++ + G +++ G
Sbjct: 194 TLF--RPFNWIGPGLDSIYTPKEGSSRVVTQ----FLGHIVRGE--NISLVD------GG 239
Query: 235 SAVRDYIHVMDLADGCIA-------------YNLGNGKG-ISVLEMVAAFEKASGKKIPI 280
S R + +V D + YN+GN SV E+ + + +
Sbjct: 240 SQKRAFTYVDDGISALMKIIENSNGVATGKIYNIGNPNNNFSVRELANKMLELAAEFPEY 299
Query: 281 KFCPRRVGDATAVYAA---------------TDKAHKELGWKPKYGIED 314
+RV A + +ELGW P++ +D
Sbjct: 300 ADSAKRVKLVETTSGAYYGNGYQDVQNRVPKIENTMQELGWAPQFTFDD 348
|
| >1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A* Length = 357 | Back alignment and structure |
|---|
Score = 131 bits (332), Expect = 1e-35
Identities = 69/353 (19%), Positives = 123/353 (34%), Gaps = 49/353 (13%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHV 64
K + VTG GF G +L L G V +VP + + +A ++ +
Sbjct: 10 KRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETAR------VADGMQSEI 63
Query: 65 GDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNC 124
GD+R+++ L + + E V H A V S P + N++GT+ L +A+
Sbjct: 64 GDIRDQNKLLESIREFQPEIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGG 123
Query: 125 KK-LVFSSSATIYGQPE-KIPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKADPEWRIILL 182
K +V +S Y E E+ G +PY +K C E+ +
Sbjct: 124 VKAVVNITSDKCYDNKEWIWGYRENEAMGGYDPYSNSKG-CAELVTSSYRNSFFNPANYG 182
Query: 183 RYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAVRDYIH 242
++ V +G + + ++P I + Q ++ A+R + H
Sbjct: 183 QHGTAVATVRAGNVIGGGDWALDRIVPDILRA--------FEQSQPVIIRNPHAIRPWQH 234
Query: 243 VMDLADG---------------CIAYNLG--NGKGISVLEMVAAFEKASGKKIPIKFCPR 285
V++ G +N G + V +V K G+ +
Sbjct: 235 VLEPLSGYLLLAQKLYTDGAEYAEGWNFGPNDADATPVKNIVEQMVKYWGEGASWQ---- 290
Query: 286 RVGDATAVYAAT------DKAHKELGWKPKYGIEDMCAH--QW--NWAKNNPM 328
+ + A KA +LGW P++ + + W NW M
Sbjct: 291 -LDGNAHPHEAHYLKLDCSKAKMQLGWHPRWNLNTTLEYIVGWHKNWLSGTDM 342
|
| >2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A Length = 345 | Back alignment and structure |
|---|
Score = 127 bits (320), Expect = 4e-34
Identities = 60/350 (17%), Positives = 117/350 (33%), Gaps = 67/350 (19%)
Query: 6 NILVTGGAGFIGTH-CALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHV 64
+L+ G GFIG H L + ++V +D D + F
Sbjct: 2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGS-------DAISRFLNHP---HFHFVE 51
Query: 65 GDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNC 124
GD+ + + +K + V+ A+ E ++P R F+ + + + + KY
Sbjct: 52 GDISIHSEWIEYH-VKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR- 109
Query: 125 KKLVFSSSATIYGQPEKIPCVEDFPYGAMNP-------YGRTKQWCEEIAFD-VQKADPE 176
K+++F S++ +YG ED + P Y +KQ + + + +K +
Sbjct: 110 KRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQ 169
Query: 177 WRIILLRYFNPVG---AHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKD 233
+ + R FN +G + + + I I V P + +
Sbjct: 170 FTLF--RPFNWMGPRLDNLNAARIGSSRAITQ----LILN-LVEGSP-IKLID------G 215
Query: 234 GSAVRDYIHVMDLADGCI-------------AYNLGNGKG-ISVLEMVAAFEKASGKKIP 279
G R + + D + N+GN + S+ E+ + K
Sbjct: 216 GKQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPL 275
Query: 280 IKFCPRRVGDATAVYAA---------------TDKAHKELGWKPKYGIED 314
P G ++ AH+ L W+PK +++
Sbjct: 276 RHHFPPFAGFRVVESSSYYGKGYQDVEHRKPSIRNAHRCLDWEPKIDMQE 325
|
| >3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A Length = 369 | Back alignment and structure |
|---|
Score = 122 bits (307), Expect = 4e-32
Identities = 39/318 (12%), Positives = 86/318 (27%), Gaps = 86/318 (27%)
Query: 6 NILVTGGAGFIGTHCALQLL-QGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHV 64
NI++TG GF+G + L + +
Sbjct: 2 NIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQTK------------------------- 36
Query: 65 GDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNC 124
+++L+ K + ++H + +H + N+ ++ + +
Sbjct: 37 -----EEELESAL--LKADFIVHLAGVN----RPEHDKEFSLGNVSYLDHVLDILTRNTK 85
Query: 125 KKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKADPEWRIILLRY 184
K + SS+ NPYG +K E++ + + + + R+
Sbjct: 86 KPAILLSSSI--------------QATQDNPYGESKLQGEQLLREYAEEY-GNTVYIYRW 130
Query: 185 FNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAVRDYIHVM 244
N G PN Y +A + ++ D + +V
Sbjct: 131 PNLFG----------KWCKPN----YNSVIATFCYKIAR--NEEIQVNDRNVELTLNYVD 174
Query: 245 DLADGCIA------------YNLGNGKGISVLEMVAAFEKASGKKIPIKFCPRRVGDATA 292
D+ + N +++ E+V K ++
Sbjct: 175 DIVAEIKRAIEGTPTIENGVPTVPNVFKVTLGEIVDLLYKFKQSRLDRTLPKLDNLFEKD 234
Query: 293 VYAATDKAHKELGWKPKY 310
+Y L + P
Sbjct: 235 LY------STYLSYLPST 246
|
| >2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A* Length = 337 | Back alignment and structure |
|---|
Score = 91.5 bits (228), Expect = 3e-21
Identities = 70/346 (20%), Positives = 126/346 (36%), Gaps = 66/346 (19%)
Query: 1 MASEKN-ILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSV--PEAVDRVKDL-AGPEL 56
M S+ + VTG +GFIG+ ++LL+ G+ V +V P V +VK L P+
Sbjct: 1 MGSQSETVCVTGASGFIGSWLVMRLLERGYTV------RATVRDPTNVKKVKHLLDLPKA 54
Query: 57 AKKLEFHVGDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLI-----G 111
L DL ++ D+ + V H VA + + +N +I G
Sbjct: 55 ETHLTLWKADLADEGSFDEAI--KGCTGVFH------VATPMDFESKDPENEVIKPTIEG 106
Query: 112 TINLYQAMAKYNC-KKLVF-SSSATIYGQPEKIPCV-------EDFPYG---AMNPYGRT 159
+ + ++ A ++LVF SS+ T+ Q ++P +F Y +
Sbjct: 107 MLGIMKSCAAAKTVRRLVFTSSAGTVNIQEHQLPVYDESCWSDMEFCRAKKMTAWMYFVS 166
Query: 160 KQWCEEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRH 219
K E+ A+ K + I + P +G + G
Sbjct: 167 KTLAEQAAWKYAK-ENNIDFITI---IPTLV-----VGPFIMSSMPPSLITALSPITGNE 217
Query: 220 PELNVYGQDYPTKDGSAVRDYIHVMDLADGCI-AYNLGNGKG--------ISVLEMVAAF 270
++ Q ++H+ DL + I + +G +L++
Sbjct: 218 AHYSIIRQ----------GQFVHLDDLCNAHIYLFENPKAEGRYICSSHDCIILDLAKML 267
Query: 271 -EKASGKKIPIKFCPRRVGDATAVYAATDKAHKELGWKPKYGIEDM 315
EK IP + +V ++ K +LG++ KY +EDM
Sbjct: 268 REKYPEYNIP-TEFKGVDENLKSVCFSSKKL-TDLGFEFKYSLEDM 311
|
| >2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A Length = 338 | Back alignment and structure |
|---|
Score = 91.2 bits (227), Expect = 4e-21
Identities = 63/351 (17%), Positives = 119/351 (33%), Gaps = 65/351 (18%)
Query: 1 MASE-----KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSV--PEAVDRVKDLAG 53
MA++ K V GG GF+ + LLQ G+ V + +V P+ +V L
Sbjct: 1 MATQHPIGKKTACVVGGTGFVASLLVKLLLQKGYAV------NTTVRDPDNQKKVSHLLE 54
Query: 54 PELAKKLEFHVGDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLI--- 110
+ L+ DL ++ + + V H VA V +N++I
Sbjct: 55 LQELGDLKIFRADLTDELSFEAPI--AGCDFVFH------VATPVHFASEDPENDMIKPA 106
Query: 111 --GTINLYQAMAKYNC-KKLVF-SSSATIYGQPEKIPCV---------EDFPYGA---MN 154
G +N+ +A + K+++ SS+A + + +F A
Sbjct: 107 IQGVVNVMKACTRAKSVKRVILTSSAAAVTINQLDGTGLVVDEKNWTDIEFLTSAKPPTW 166
Query: 155 PYGRTKQWCEEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQV 214
Y +K E+ A+ + + +I + P G + + +
Sbjct: 167 GYPASKTLAEKAAWKFAE-ENNIDLITV---IPTLM-----AGSSLTSDVPSSIGLAMSL 217
Query: 215 AVGRHPELNVYGQDYPTKDGSAVRDYIHVMDLADGCI-AYNLGNGKG--------ISVLE 265
G +N + HV D+ I + G SV E
Sbjct: 218 ITGNEFLINGMKGMQMLSGSVS---IAHVEDVCRAHIFVAEKESASGRYICCAANTSVPE 274
Query: 266 MVAAF-EKASGKKIPIKFCPRRVGDATAVYAATDKAHKELGWKPKYGIEDM 315
+ ++ K+P F + + +++K + G+ KYGIE++
Sbjct: 275 LAKFLSKRYPQYKVPTDF--GDFPPKSKLIISSEKL-VKEGFSFKYGIEEI 322
|
| >2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus} Length = 321 | Back alignment and structure |
|---|
Score = 89.2 bits (222), Expect = 2e-20
Identities = 65/344 (18%), Positives = 120/344 (34%), Gaps = 75/344 (21%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHV 64
L+TG AGF+G + A L + +V + ++ ++ E
Sbjct: 13 MRALITGVAGFVGKYLANHLTEQNVEV------FGTSRNNEAKLPNV---------EMIS 57
Query: 65 GDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQA--MAKY 122
D+ + + K+ S K + + H A +V +S + F N+ GT+++ A +
Sbjct: 58 LDIMDSQRVKKVISDIKPDYIFHLAAKSSVKDSWLNKKGTFSTNVFGTLHVLDAVRDSNL 117
Query: 123 NCKKLVFSSSATIYGQ--PEKIPCVEDFPYGAMNPYGRTKQWCEEI------AFDVQKAD 174
+C+ L SS YG PE+ P E+ M+PYG +K + A+ +
Sbjct: 118 DCRILTIGSSE-EYGMILPEESPVSEENQLRPMSPYGVSKASVGMLARQYVKAYGM---- 172
Query: 175 PEWRIILLRYFNPVGAHESGKLGED---PKGIPNNLMPYIQQVA---VGRHPELNVYGQD 228
II R FN H + +Q+ + + + G
Sbjct: 173 ---DIIHTRTFN----HIGPGQSLGFVTQD--------FAKQIVDIEMEKQEPIIKVGNL 217
Query: 229 YPTKDGSAVRDYIHVM------DLADGCIAYNLGNGKGISVLEMVAAFEKASGKKIPIKF 282
+D + VRD + YN+ +G G + +++ + KI +
Sbjct: 218 EAVRDFTDVRDIVQAYWLLSQYGKTGDV--YNVCSGIGTRIQDVLDLLLAMANVKIDTEL 275
Query: 283 CPRR---------VGDATAVYAATDKAHKELGWKPKYGIEDMCA 317
P + +G + GWKP+ +E
Sbjct: 276 NPLQLRPSEVPTLIGSNK-------RLKDSTGWKPRIPLEKSLF 312
|
| >1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A* Length = 337 | Back alignment and structure |
|---|
Score = 88.7 bits (221), Expect = 4e-20
Identities = 89/375 (23%), Positives = 139/375 (37%), Gaps = 114/375 (30%)
Query: 6 NILVTGGAGFIGTHCALQLLQGGF------KVVLID------NLHNSVPEAVDRVKDLAG 53
+LVTGGAGFIG+H QLL G + +V+++D N N LA
Sbjct: 2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRAN-----------LAP 50
Query: 54 PELAKKLEFHVGDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTI 113
+ +L F GD+R+ L + + +A++HF A V S+ + + N+ GT
Sbjct: 51 VDADPRLRFVHGDIRDAGLLAREL--RGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQ 108
Query: 114 NLYQAMAKYNCKKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKA 173
L Q ++V S+ +YG + E P +PY +K A +
Sbjct: 109 TLLQCAVDAGVGRVVHVSTNQVYGSIDSGSWTESSPLEPNSPYAASK------A----GS 158
Query: 174 DPEWRIILLRYFNPVGA-HESGKLGEDPKGIP-------NNLMPYIQQVAVGRHPE---- 221
D L+ A H + G+ NN PY +HPE
Sbjct: 159 D------LV-----ARAYHRT-------YGLDVRITRCCNNYGPY-------QHPEKLIP 193
Query: 222 ---LN--------VYGQDYPTKDGSAVRDYIHVMD--------LADGCI--AYNLGNGKG 260
N +YG DG+ VR+++H D LA G Y++G G
Sbjct: 194 LFVTNLLDGGTLPLYG------DGANVREWVHTDDHCRGIALVLAGGRAGEIYHIGGGLE 247
Query: 261 ISVLEMVAAFEKASGK-KIPIKFCPRRVG-------DATAVYAATDKAHKELGWKPKYGI 312
++ E+ + G ++ R G D K +ELG++P+
Sbjct: 248 LTNRELTGILLDSLGADWSSVRKVADRKGHDLRYSLDGG-------KIERELGYRPQVSF 300
Query: 313 EDMCAHQWNWAKNNP 327
D A W + N
Sbjct: 301 ADGLARTVRWYRENR 315
|
| >1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A* Length = 348 | Back alignment and structure |
|---|
Score = 88.0 bits (219), Expect = 6e-20
Identities = 85/372 (22%), Positives = 129/372 (34%), Gaps = 126/372 (33%)
Query: 1 MASEKNILVTGGAGFIGTHCALQLLQ--GGFKVVLID------NLHNSVPEAVDRVKDLA 52
M+ KNI+VTGGAGFIG++ + V ++D N N ++ +
Sbjct: 1 MSQFKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKAN--------LEAIL 52
Query: 53 GPELAKKLEFHVGDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGT 112
G ++E VGD+ + + +DKL + K +A++H+ A S+ P + N IGT
Sbjct: 53 GD----RVELVVGDIADAELVDKLAA--KADAIVHYAAESHNDNSLNDPSPFIHTNFIGT 106
Query: 113 INLYQAMAKYNCK-----------KLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQ 161
L +A KY+ + L +G+ + Y +PY TK
Sbjct: 107 YTLLEAARKYDIRFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSSPYSSTK- 165
Query: 162 WCEEIAFDVQKADPEWRIILLRYFNPVGA-HESGKLGEDPKGIP-------NNLMPYIQQ 213
A +D L+ V A S G+ NN PY
Sbjct: 166 -----A----ASD------LI-----VKAWVRS-------FGVKATISNCSNNYGPY--- 195
Query: 214 VAVGRHPE---------------LNVYGQDYPTKDGSAVRDYIHVMD--------LADGC 250
+H E +YG +G VRD+IH D L G
Sbjct: 196 ----QHIEKFIPRQITNILAGIKPKLYG------EGKNVRDWIHTNDHSTGVWAILTKGR 245
Query: 251 IA--YNLGNG---KGISVLEMVAAFEKASGKKIPIKFCPRRVG-------DATAVYAATD 298
+ Y +G VLE++ R G DA+
Sbjct: 246 MGETYLIGADGEKNNKEVLELILEKMGQPKDA--YDHVTDRAGHDLRYAIDAS------- 296
Query: 299 KAHKELGWKPKY 310
K ELGW P++
Sbjct: 297 KLRDELGWTPQF 308
|
| >1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1 Length = 660 | Back alignment and structure |
|---|
Score = 88.6 bits (220), Expect = 1e-19
Identities = 68/360 (18%), Positives = 128/360 (35%), Gaps = 61/360 (16%)
Query: 1 MASEKNILVTGGAGFIGTH-CALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKK 59
+L+ G GFIG H L + ++V +D D +
Sbjct: 312 ARRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGS-------DAISRFLNHP---H 361
Query: 60 LEFHVGDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAM 119
F GD+ + + + +K + V+ A+ E ++P R F+ + + + +
Sbjct: 362 FHFVEGDISIHSEWIE-YHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYC 420
Query: 120 AKYNCKKLVFSSSATIYGQPEKIPCVEDFPYGAMNP-------YGRTKQWCEEIAFDVQK 172
KY K+++F S++ +YG ED + P Y +KQ + + +
Sbjct: 421 VKYR-KRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIW-AYG 478
Query: 173 ADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTK 232
+ L R FN +G L G + I + G + +
Sbjct: 479 EKEGLQFTLFRPFNWMGPRLDN-LNAARIGSSRAITQLILNLVEGSP--IKLID------ 529
Query: 233 DGSAVRDYIHVMDL--------------ADGCIAYNLGNGKG-ISVLE----MVAAFEKA 273
G R + + D DG I N+GN + S+ E ++A+FEK
Sbjct: 530 GGKQKRCFTDIRDGIEALYRIIENAGNRCDGEI-INIGNPENEASIEELGEMLLASFEKH 588
Query: 274 SGKKIPIKFCPRRVGDATAVYA-----------ATDKAHKELGWKPKYGIEDMCAHQWNW 322
+ F RV ++++ Y + AH+ L W+PK +++ ++
Sbjct: 589 PLRHHFPPFAGFRVVESSSYYGKGYQDVEHRKPSIRNAHRCLDWEPKIDMQETIDETLDF 648
|
| >1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A Length = 342 | Back alignment and structure |
|---|
Score = 84.3 bits (209), Expect = 1e-18
Identities = 55/360 (15%), Positives = 113/360 (31%), Gaps = 80/360 (22%)
Query: 1 MASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSV--PEAVDRVKDLAGPELAK 58
+ +LVTG GF+ +H QLL+ G+KV + + ++ +
Sbjct: 8 LPEGSLVLVTGANGFVASHVVEQLLEHGYKV------RGTARSASKLANLQKRWDAKYPG 61
Query: 59 KLEFH-VGDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFD--NNLI----- 110
+ E V D+ + D++ + V H +A + + + ++
Sbjct: 62 RFETAVVEDMLKQGAYDEVI--KGAAGVAH------IA----SVVSFSNKYDEVVTPAIG 109
Query: 111 GTINLYQAMAKY-NCKKLVF-SSSATIYGQPEKIPCV-------------------EDFP 149
GT+N +A A + K+ V SS+ + + + E P
Sbjct: 110 GTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTLPESDP 169
Query: 150 YGAMNPYGRTKQWCEEIAFD-VQKADPEWRIILLRYFNPVGAHESGKLGE--DPKGIPNN 206
++ Y +K E A+ + + P + + + P +G DP+ +
Sbjct: 170 QKSLWVYAASKTEAELAAWKFMDENKPHFTLNAV---LPNYT-----IGTIFDPETQSGS 221
Query: 207 LMPYIQQVAVGRHPELNVYGQDYPTKDGSAVRDYIHVMDLADGCIA----------YNLG 256
++ + G Y+ +D+ + G
Sbjct: 222 TSGWMMSLFNGEVSP------ALALMPPQY---YVSAVDIGLLHLGCLVLPQIERRRVYG 272
Query: 257 NGKGISVLEMVAAF-EKASGKKIPIKFCPRRVGDATAVYAATDKAHKELGWKPKYGIEDM 315
++A F + K P F + + A + + K LG IE+
Sbjct: 273 TAGTFDWNTVLATFRKLYPSKTFPADFPDQGQDLSKFDTAPSLEILKSLGRPGWRSIEES 332
|
| >2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa} Length = 322 | Back alignment and structure |
|---|
Score = 83.0 bits (206), Expect = 3e-18
Identities = 57/342 (16%), Positives = 104/342 (30%), Gaps = 66/342 (19%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSV---PEAVDRVKDL-AGPELAKKL 60
+ VTGG GF+G+ LL+ G+ V + ++ PE V L P ++KL
Sbjct: 2 GRVCVTGGTGFLGSWIIKSLLENGYSV------NTTIRADPERKRDVSFLTNLPGASEKL 55
Query: 61 EFHVGDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLI-----GTINL 115
F DL N D + + H A + + + G + +
Sbjct: 56 HFFNADLSNPDSFAAAI--EGCVGIFH------TASPIDFAVSEPEEIVTKRTVDGALGI 107
Query: 116 YQAMAKYNC-KKLVF-SSSATIYGQPEKIPCV-------EDFPYGA---MNPYGRTKQWC 163
+A K+ ++ SS + + + + D Y +K
Sbjct: 108 LKACVNSKTVKRFIYTSSGSAVSFNGKDKDVLDESDWSDVDLLRSVKPFGWNYAVSKTLA 167
Query: 164 EEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELN 223
E+ + + ++ L +G + + + +G+ +
Sbjct: 168 EKAVLEFGE-QNGIDVVTL---ILPFI-----VGRFVCPKLPDSIEKALVLVLGKKEQ-- 216
Query: 224 VYGQDYPTKDGSAVRDYIHVMDLADGCI-AYNLGNGKG--------ISVLEMVAAF-EKA 273
+HV D+A I G + + EM K
Sbjct: 217 -----IGVTRFH----MVHVDDVARAHIYLLENSVPGGRYNCSPFIVPIEEMSQLLSAKY 267
Query: 274 SGKKIPIKFCPRRVGDATAVYAATDKAHKELGWKPKYGIEDM 315
+I + + A T K + G+ KY IEDM
Sbjct: 268 PEYQILTVDELKEIKGARLPDLNTKKL-VDAGFDFKYTIEDM 308
|
| >3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} Length = 227 | Back alignment and structure |
|---|
Score = 80.1 bits (198), Expect = 7e-18
Identities = 32/214 (14%), Positives = 69/214 (32%), Gaps = 25/214 (11%)
Query: 1 MASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAK-K 59
M K I++ G +GF+G+ + L GF+V + V+ ++
Sbjct: 1 MEKVKKIVLIGASGFVGSALLNEALNRGFEVTAV-------------VRHPEKIKIENEH 47
Query: 60 LEFHVGDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAM 119
L+ D+ + D++ ++ + +AVI + +D + + + +
Sbjct: 48 LKVKKADVSSLDEVCEVC--KGADAVIS------AFNPGWNNPDIYDETIKVYLTIIDGV 99
Query: 120 AKYNCKKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKA-DPEWR 178
K + + A + + D N K E + K + +W
Sbjct: 100 KKAGVNRFLMVGGAGSLFIAPGLRLM-DSGEVPENILPGVKALGEFYLNFLMKEKEIDWV 158
Query: 179 IIL-LRYFNPVGAHESGKLGEDPKGIPNNLMPYI 211
P +LG+D + +I
Sbjct: 159 FFSPAADMRPGVRTGRYRLGKDDMIVDIVGNSHI 192
|
| >2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* Length = 364 | Back alignment and structure |
|---|
Score = 81.3 bits (200), Expect = 2e-17
Identities = 51/338 (15%), Positives = 84/338 (24%), Gaps = 66/338 (19%)
Query: 5 KNILVTGGAGFIGTHCALQLLQ-----GGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKK 59
L+ G G IG A L G +KV V R A E
Sbjct: 2 SVALIVGVTGIIGNSLAEILPLADTPGGPWKVY-----------GVARRTRPAWHEDN-P 49
Query: 60 LEFHVGDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPF--RYFDNNLIGTINLYQ 117
+ + D+ + DD S V H + N N+
Sbjct: 50 INYVQCDISDPDDSQAKLS--PLTDVTHV----FYVTWANRSTEQENCEANSKMFRNVLD 103
Query: 118 AMAKY--NCKKLVFSSSATIY---------GQPEKIPCVEDFPYGAMNPYGRTKQWCEEI 166
A+ N K + + Y + P ED P Y E+I
Sbjct: 104 AVIPNCPNLKHISLQTGRKHYMGPFESYGKIESHDPPYTEDLPR---LKYMNFYYDLEDI 160
Query: 167 AFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYG 226
+ + + R N G P + N + A+ +H +
Sbjct: 161 MLEEVEKKEGLTWSVHRPGNIFGF--------SPYSMMNLVGTLCVYAAICKHEGKVLR- 211
Query: 227 QDYPTKDGS--AVRDYIHVMDLADGCI-----------AYNLGNGKGISVLEMVAAFEKA 273
+ + D +A+ I A+N+ NG +
Sbjct: 212 --FTGCKAAWDGYSDCSDADLIAEHHIWAAVDPYAKNEAFNVSNGDVFKWKHFWKVLAEQ 269
Query: 274 SGKKI---PIKFCPRRVGDATAVYAATDKAHKELGWKP 308
G + + ++ +E G P
Sbjct: 270 FGVECGEYEEGVDLKLQDLMKGKEPVWEEIVRENGLTP 307
|
| >4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis} Length = 346 | Back alignment and structure |
|---|
Score = 79.5 bits (197), Expect = 6e-17
Identities = 47/169 (27%), Positives = 84/169 (49%), Gaps = 20/169 (11%)
Query: 1 MASEKNILVTGGAGFIGTHCALQLLQG--GFKVVLID------NLHNSVPEAVDRVKDLA 52
++ NILVTGGAGFIG++ +LQ +K++ D NL+N +
Sbjct: 21 QSNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNN-----------VK 69
Query: 53 GPELAKKLEFHVGDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGT 112
+ F G+++N + L+ + + + +++F A V S+++P ++D N+IGT
Sbjct: 70 SIQDHPNYYFVKGEIQNGELLEHVIKERDVQVIVNFAAESHVDRSIENPIPFYDTNVIGT 129
Query: 113 INLYQAMAKYNCKKLVFSSSATIYGQ-PEKIPCVEDFPYGAMNPYGRTK 160
+ L + + KY KLV S+ +YG + E+ P +PY +K
Sbjct: 130 VTLLELVKKYPHIKLVQVSTDEVYGSLGKTGRFTEETPLAPNSPYSSSK 178
|
| >3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} Length = 286 | Back alignment and structure |
|---|
Score = 76.3 bits (188), Expect = 4e-16
Identities = 52/324 (16%), Positives = 97/324 (29%), Gaps = 82/324 (25%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHV 64
IL+ G G +G A +L G +V + R + ++ +
Sbjct: 4 SKILIAG-CGDLGLELARRLTAQGHEVT-----------GLRRSAQP----MPAGVQTLI 47
Query: 65 GDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNC 124
D+ D L + + E +++ VA S Y + + G N A+
Sbjct: 48 ADVTRPDTLASIVHLR-PEILVY-----CVAASEYSDEHYRLSYVEGLRNTLSALEGAPL 101
Query: 125 KKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKADPEWRIILLRY 184
+ + F SS +YGQ + ED P A + G+ E + + +LR+
Sbjct: 102 QHVFFVSSTGVYGQEVEEWLDEDTPPIAKDFSGKRMLEAEALLAA-------YSSTILRF 154
Query: 185 FNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAVRDYIHVM 244
SG G GR + +A + IH
Sbjct: 155 --------SGIYGP------------------GRLRMIRQAQTPEQWPARNAWTNRIHRD 188
Query: 245 DLADGCIA-------------YNLGNGKGISVLEMVAAFEKASGKKIPIKFCP-----RR 286
D A Y + + + + V +++ G P P ++
Sbjct: 189 DGAAFIAYLIQQRSHAVPERLYIVTDNQPLPVHDLLRWLADRQGIAYPAGATPPVQGNKK 248
Query: 287 VGDATAVYAATDKAHKELGWKPKY 310
+ + + G++ Y
Sbjct: 249 L--------SNARL-LASGYQLIY 263
|
| >2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii} Length = 336 | Back alignment and structure |
|---|
Score = 72.5 bits (179), Expect = 1e-14
Identities = 34/132 (25%), Positives = 60/132 (45%), Gaps = 21/132 (15%)
Query: 3 SEKNILVTGGAGFIGTHCALQLLQG--GFKVVLID------NLHNSVPEAVDRVKDLAGP 54
+LVTGG GFIG++ +L+ ++V+ ID N N L
Sbjct: 2 HSMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPAN-----------LKDL 50
Query: 55 ELAKKLEFHVGDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTIN 114
E + F GD+ + + + +L +K + V+H A V S+ P + +N+IGT
Sbjct: 51 EDDPRYTFVKGDVADYELVKELV--RKVDGVVHLAAESHVDRSISSPEIFLHSNVIGTYT 108
Query: 115 LYQAMAKYNCKK 126
L +++ + N +
Sbjct: 109 LLESIRRENPEV 120
|
| >1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* Length = 206 | Back alignment and structure |
|---|
Score = 70.0 bits (172), Expect = 2e-14
Identities = 32/176 (18%), Positives = 60/176 (34%), Gaps = 30/176 (17%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHV 64
K I + G G G Q +Q G++V + R E + V
Sbjct: 4 KKIAIFGATGQTGLTTLAQAVQAGYEVT-----------VLVRDSSRLPSEGPRPAHVVV 52
Query: 65 GDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNC 124
GD+ D+DK + Q +AVI ++ G N+ AM +
Sbjct: 53 GDVLQAADVDKTVAGQ--DAVIV-------LLGTRNDLSPTTVMSEGARNIVAAMKAHGV 103
Query: 125 KKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKADPEWRII 180
K+V +SA + P K+P + ++ ++++ ++ +
Sbjct: 104 DKVVACTSAFLLWDPTKVP-------PRLQAVTDDHIRMHKV---LRESGLKYVAV 149
|
| >1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A* Length = 361 | Back alignment and structure |
|---|
Score = 71.8 bits (177), Expect = 3e-14
Identities = 33/124 (26%), Positives = 57/124 (45%), Gaps = 18/124 (14%)
Query: 6 NILVTGGAGFIGTHCALQLLQ-GGFKVVLID------NLHNSVPEAVDRVKDLAGPELAK 58
IL+TGGAGFIG+ +++ VV ID NL + L+ +
Sbjct: 2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLES-----------LSDISESN 50
Query: 59 KLEFHVGDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQA 118
+ F D+ + ++ ++F + +AV+H A V S+ P + + N++GT L +
Sbjct: 51 RYNFEHADICDSAEITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEV 110
Query: 119 MAKY 122
KY
Sbjct: 111 ARKY 114
|
| >4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis} Length = 478 | Back alignment and structure |
|---|
Score = 64.6 bits (157), Expect = 1e-11
Identities = 38/206 (18%), Positives = 74/206 (35%), Gaps = 47/206 (22%)
Query: 2 ASEKNILVTGGAGFIGTHCALQLLQ---GGFKVVLIDNLHNSVPEAVDRVKDLAG----- 53
+ +L+TG GF+G + L+LL+ +++ + S +A R++
Sbjct: 71 PELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICL-VRAESDEDARRRLEKTFDSGDPE 129
Query: 54 ------PELAKKLEFHVGDLR------NKDDLDKLFSSQKFEAVIHFGALKAVAESVQH- 100
A +LE GD ++ +L ++ + ++ A+ V
Sbjct: 130 LLRHFKELAADRLEVVAGDKSEPDLGLDQPMWRRL--AETVDLIVDSAAM------VNAF 181
Query: 101 -PFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQPEKIPCVEDFPYGAMNP---- 155
F N+ GT L + K + S+A + E ED ++P
Sbjct: 182 PYHELFGPNVAGTAELIRIALTTKLKPFTYVSTADVGAAIEPSAFTEDADIRVISPTRTV 241
Query: 156 -------YGRTKQW-CEEIAFDVQKA 173
YG +K W E + +++A
Sbjct: 242 DGGWAGGYGTSK-WAGEVL---LREA 263
|
| >3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} Length = 219 | Back alignment and structure |
|---|
Score = 61.9 bits (151), Expect = 1e-11
Identities = 29/180 (16%), Positives = 61/180 (33%), Gaps = 38/180 (21%)
Query: 6 NILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAV---DRVKDLAGPELAKKLEF 62
I + G G +G L +++ ++V ++
Sbjct: 2 KIFIVGSTGRVGKSLLKSLSTTDYQIYAG----------ARKVEQVPQYNN------VKA 45
Query: 63 HVGDL-RNKDDLDKLFSSQKFEAVIH-FGALKAVAESVQHPFRYFDNNLIGTINLYQAMA 120
D+ +++ K +A+I+ G+ V +L G + L QA
Sbjct: 46 VHFDVDWTPEEMAKQL--HGMDAIINVSGSGGKSLLKV---------DLYGAVKLMQAAE 94
Query: 121 KYNCKKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKADPEWRII 180
K K+ + S+ QPEK + A+ Y K + + + ++ + ++ II
Sbjct: 95 KAEVKRFILLSTIFS-LQPEKWI---GAGFDALKDYYIAKHFADL--YLTKETNLDYTII 148
|
| >2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A* Length = 344 | Back alignment and structure |
|---|
Score = 63.1 bits (154), Expect = 2e-11
Identities = 46/199 (23%), Positives = 81/199 (40%), Gaps = 39/199 (19%)
Query: 1 MASEKNILVTGGAGFIGTHCALQLLQGGF--KVVLIDNLHNSVPEAVDRVK--DLAGPEL 56
M + IL+TGG G G ++L K+++ D +K ++A
Sbjct: 18 MLDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSR---------DELKQSEMAMEFN 68
Query: 57 AKKLEFHVGDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLY 116
++ F +GD+R+ + L+ IH ALK V + +P N++G N+
Sbjct: 69 DPRMRFFIGDVRDLERLNYALEGVDI--CIHAAALKHVPIAEYNPLECIKTNIMGASNVI 126
Query: 117 QAMAKYNCKKLVFSSSATIYGQPEKIPCVEDFPYGAMNP---YGRTKQWCEE---IAFDV 170
A K +++ S+ +K A NP YG TK C + ++ +
Sbjct: 127 NACLKNAISQVIALST-------DK----------AANPINLYGATK-LCSDKLFVSANN 168
Query: 171 QKADPEWRIILLRYFNPVG 189
K + + ++RY N VG
Sbjct: 169 FKGSSQTQFSVVRYGNVVG 187
|
| >1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 Length = 308 | Back alignment and structure |
|---|
Score = 62.2 bits (151), Expect = 3e-11
Identities = 46/300 (15%), Positives = 90/300 (30%), Gaps = 71/300 (23%)
Query: 1 MASEKNILVTGGAGFIGTHCALQLLQGGFKVVLI--DNLHNSVPEAVDRVKDLAGPELAK 58
M S IL+ G G+IG H A L G L+ ++ +S E ++ A
Sbjct: 1 MGSRSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFK----AS 56
Query: 59 KLEFHVGDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQA 118
G + + L + + + VI + ++ Q +N+ +A
Sbjct: 57 GANIVHGSIDDHASLVEAV--KNVDVVIS--TVGSLQIESQ-------------VNIIKA 99
Query: 119 MAKYNCKKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKADPEWR 178
+ + K F S +G + + ++ E +
Sbjct: 100 IKEVGTVKRFFPSE---FGNDVDNVHAVEPAKSVFEVKAKVRRAIEAEGI-------PYT 149
Query: 179 IILLRYF--NPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSA 236
+ F + + L P+ ++ + G DG+A
Sbjct: 150 YVSSNCFAGYFLRSLAQAGLTAPPRD------------------KVVILG------DGNA 185
Query: 237 VRDYIHVMDLADGCIA------------YNLGNGKGISVLEMVAAFEKASGKKIPIKFCP 284
++ D+ I Y +S+ E+VA +EK K + + P
Sbjct: 186 RVVFVKEEDIGTFTIKAVDDPRTLNKTLYLRLPANTLSLNELVALWEKKIDKTLEKAYVP 245
|
| >3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} Length = 236 | Back alignment and structure |
|---|
Score = 61.2 bits (149), Expect = 4e-11
Identities = 31/176 (17%), Positives = 63/176 (35%), Gaps = 31/176 (17%)
Query: 6 NILVTGGAGFIGTHCALQLLQGGFKVV-LIDNLHNSVPEAVDRVKDLAGPELAKKLEFHV 64
+LV G G + + +L G + V ++ N E +++ ++ V
Sbjct: 23 RVLVVGANGKVARYLLSELKNKGHEPVAMVRN-----EEQGPELRERGASDIV------V 71
Query: 65 GDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNC 124
+L +D F +AV+ A + + D L G I Q K
Sbjct: 72 ANLE--EDFSHAF--ASIDAVVF--AAGSGPHTGADKTILID--LWGAIKTIQEAEKRGI 123
Query: 125 KKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKADPEWRII 180
K+ + SS P++ P M Y K+ ++ ++++ ++ I+
Sbjct: 124 KRFIMVSSVGT-VDPDQGP-------MNMRHYLVAKRLADDE---LKRSSLDYTIV 168
|
| >3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} Length = 224 | Back alignment and structure |
|---|
Score = 60.8 bits (147), Expect = 5e-11
Identities = 36/208 (17%), Positives = 60/208 (28%), Gaps = 24/208 (11%)
Query: 6 NILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVG 65
I V G G G+ + + G +V+ AV R D
Sbjct: 2 KIAVLGATGRAGSAIVAEARRRGHEVL-----------AVVR--DPQKAADRLGATVATL 48
Query: 66 DLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCK 125
+ S +AV+ A++ Y + +L + +
Sbjct: 49 VKEPLVLTEADLDSV--DAVVD-----ALSVPWGSGRGYLHLD--FATHLVSLLRNSDTL 99
Query: 126 KLVFSSSATIYGQPEKIPCVEDFPYGAMNP--YGRTKQWCEEIAFDVQKADPEWRIILLR 183
+ SA++ P + DFP A + Y E F A+ W I
Sbjct: 100 AVFILGSASLAMPGADHPMILDFPESAASQPWYDGALYQYYEYQFLQMNANVNWIGISPS 159
Query: 184 YFNPVGAHESGKLGEDPKGIPNNLMPYI 211
P G S G+D + + +I
Sbjct: 160 EAFPSGPATSYVAGKDTLLVGEDGQSHI 187
|
| >1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 Length = 313 | Back alignment and structure |
|---|
Score = 61.9 bits (150), Expect = 5e-11
Identities = 40/299 (13%), Positives = 84/299 (28%), Gaps = 64/299 (21%)
Query: 1 MASEKNILVTGGAGFIGTHCALQLLQGGFKV-VLIDNLHNSVPEAVDRVKDLAGPELAKK 59
M + +L+ GG G+IG + G VL S + V +
Sbjct: 1 MDKKSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFK----QLG 56
Query: 60 LEFHVGDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAM 119
+ L + L ++ + VI ++++ + L +A+
Sbjct: 57 AKLIEASLDDHQRLVDAL--KQVDVVISA-----------LAGGVLSHHILEQLKLVEAI 103
Query: 120 AKYNCKKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKADPEWRI 179
+ K S +G D A+ P T ++ ++ A +
Sbjct: 104 KEAGNIKRFLPSE---FG------MDPDIMEHALQPGSITFIDKRKVRRAIEAASIPYTY 154
Query: 180 ILLRYF--NPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAV 237
+ F G+ P ++ +YG DG+
Sbjct: 155 VSSNMFAGYFAGSLAQLDGHMMPP-----------------RDKVLIYG------DGNVK 191
Query: 238 RDYIHVMDLADGCIA------------YNLGNGKGISVLEMVAAFEKASGKKIPIKFCP 284
++ D+ I Y +S E++ +E+ S + + +
Sbjct: 192 GIWVDEDDVGTYTIKSIDDPQTLNKTMYIRPPMNILSQKEVIQIWERLSEQNLDKIYIS 250
|
| >3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} Length = 236 | Back alignment and structure |
|---|
Score = 58.7 bits (142), Expect = 3e-10
Identities = 33/201 (16%), Positives = 61/201 (30%), Gaps = 35/201 (17%)
Query: 5 KNILVTGGAGFIGTHCALQLLQ-GGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFH 63
KN+L+ G G I H QL K R +
Sbjct: 24 KNVLILGAGGQIARHVINQLADKQTIKQT-----------LFARQPAKIHKPYPTNSQII 72
Query: 64 VGDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYN 123
+GD+ N L + Q + V ++ I ++ AM +
Sbjct: 73 MGDVLNHAALKQAMQGQ--DIVYANLT--------------GEDLDIQANSVIAAMKACD 116
Query: 124 CKKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKADPEWRIILLR 183
K+L+F S IY E ++ + + + + ++ + E+ I+
Sbjct: 117 VKRLIFVLSLGIY--DEVPGKFVEWNNAVIGEPLKPFRRAADA---IEASGLEYTILRPA 171
Query: 184 YF--NPVGAHESGKLGEDPKG 202
+ + +E E KG
Sbjct: 172 WLTDEDIIDYELTSRNEPFKG 192
|
| >3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} Length = 221 | Back alignment and structure |
|---|
Score = 57.3 bits (138), Expect = 6e-10
Identities = 26/209 (12%), Positives = 57/209 (27%), Gaps = 28/209 (13%)
Query: 6 NILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVG 65
I + G G G+ + G +V A+ R + K +
Sbjct: 2 KIGIIGATGRAGSRILEEAKNRGHEVT-----------AIVRNAG-KITQTHKDINILQK 49
Query: 66 DLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCK 125
D+ + + V ++ + ++ +L +
Sbjct: 50 DIFD-------------LTLSDLSDQNVVVDAYGISPDEAEKHVTSLDHLISVLNGTVSP 96
Query: 126 KLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQWCEEI--AFDVQKADPEWRIILLR 183
+L+ A E + + PY T + + +A+ W I
Sbjct: 97 RLLVVGGAASLQIDEDGNTLLESKGLREAPYYPTARAQAKQLEHLKSHQAEFSWTYISPS 156
Query: 184 Y-FNPVGAHESGKLGEDPKGIPNNLMPYI 211
F P ++G+D ++ +I
Sbjct: 157 AMFEPGERTGDYQIGKDHLLFGSDGNSFI 185
|
| >1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* Length = 253 | Back alignment and structure |
|---|
Score = 56.8 bits (137), Expect = 2e-09
Identities = 41/304 (13%), Positives = 84/304 (27%), Gaps = 82/304 (26%)
Query: 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLE 61
A+ +LVTG +G G +L +G V + + R ++ + +
Sbjct: 2 ANLPTVLVTGASGRTGQIVYKKLKEGS---------DKFVAKGLVRSAQGK-EKIGGEAD 51
Query: 62 FHVGDLRNKDDLDKLFSSQKFEAVIH-------------FGALKAVAESVQHPFRYFDNN 108
+GD+ + D ++ F Q +A++ + +
Sbjct: 52 VFIGDITDADSINPAF--QGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVD 109
Query: 109 LIGTINLYQAMAKYNCKKLVFSSS--ATIYGQPEKIPCVEDFPYGAMNPYGRTKQWCEEI 166
IG N A K +V S T P K+ E+
Sbjct: 110 WIGQKNQIDAAKVAGVKHIVVVGSMGGTNPDHPLNKL--------GNGNILVWKRKAEQY 161
Query: 167 AFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYG 226
+ + + I +R G + + R +
Sbjct: 162 ---LADSGTPYTI--IR---AGG--------------------LLDKEGGVRELLVGKDD 193
Query: 227 QDYPTKDGSAVRDYIHVMDLADGCIA-----------YNLGNGK---GISVLEMVAAFEK 272
+ T + + D+A+ CI ++LG+ + A F +
Sbjct: 194 ELLQTDTKT-----VPRADVAEVCIQALLFEEAKNKAFDLGSKPEGTSTPTKDFKALFSQ 248
Query: 273 ASGK 276
+ +
Sbjct: 249 VTSR 252
|
| >2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} Length = 307 | Back alignment and structure |
|---|
Score = 56.0 bits (135), Expect = 3e-09
Identities = 42/297 (14%), Positives = 91/297 (30%), Gaps = 68/297 (22%)
Query: 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKK-LE 61
+E IL+ G G IG H ++ G + + ++ A K+ +
Sbjct: 1 TENKILILGPTGAIGRHIVWASIKAGNPTYAL--VRKTITAANPETKEELIDNYQSLGVI 58
Query: 62 FHVGDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAK 121
GD+ + + L K ++ + VI A + Q + + +A+ +
Sbjct: 59 LLEGDINDHETLVKAI--KQVDIVI--CAAGRLLIEDQ-------------VKIIKAIKE 101
Query: 122 YNCKKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKADPEWRIIL 181
K F S +G ++ + A+ P + + I ++ + +
Sbjct: 102 AGNVKKFFPSE---FG-------LDVDRHDAVEPVRQVFEEKASIRRVIEAEGVPYTYLC 151
Query: 182 LRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPE--LNVYGQDYPTKDGSAVRD 239
F + + Q+ P + + G DG+
Sbjct: 152 CHAF------------------TGYFLRNLAQLDATDPPRDKVVILG------DGNVKGA 187
Query: 240 YIHVMDLADGCIA------------YNLGNGKGISVLEMVAAFEKASGKKIPIKFCP 284
Y+ D+ I + ++ E++A +EK GK + +
Sbjct: 188 YVTEADVGTFTIRAANDPNTLNKAVHIRLPKNYLTQNEVIALWEKKIGKTLEKTYVS 244
|
| >1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2 Length = 292 | Back alignment and structure |
|---|
Score = 53.3 bits (129), Expect = 3e-08
Identities = 41/183 (22%), Positives = 62/183 (33%), Gaps = 46/183 (25%)
Query: 6 NILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVG 65
IL+TG G +G QL +V+ D +L
Sbjct: 14 KILITGANGQLGREIQKQLKGKNVEVI-----------PTDV------QDL--------- 47
Query: 66 DLRNKDDLDKLFSSQKFEAVIHFGALKAV--AESVQHPFRYFDNNLIGTINLYQAMAKYN 123
D+ N ++K F+ +K VI+ A AV E + N IG NL A
Sbjct: 48 DITNVLAVNKFFNEKKPNVVINCAAHTAVDKCEE--QYDLAYKINAIGPKNLAAAAYSVG 105
Query: 124 CKKL------VFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKADPEW 177
+ + VF A P E + YG+TK E V+ +P++
Sbjct: 106 AEIVQISTDYVFDGEAK-------EPITEFDEVNPQSAYGKTKLEGENF---VKALNPKY 155
Query: 178 RII 180
I+
Sbjct: 156 YIV 158
|
| >2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A Length = 315 | Back alignment and structure |
|---|
Score = 53.4 bits (129), Expect = 3e-08
Identities = 30/184 (16%), Positives = 59/184 (32%), Gaps = 40/184 (21%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHV 64
+ +LVTG G +G + Q + V R ++
Sbjct: 3 RRVLVTGATGLLGRAVHKEFQQNNWHAVGCGF----------RRARPKFEQV-------- 44
Query: 65 GDLRNKDDLDKLFSSQKFEAVIHFGALKAV--AESVQHPFRYFDNNLIGTINLYQAMAKY 122
+L + + + + + ++H A + E+ P N+ + NL + A
Sbjct: 45 -NLLDSNAVHHIIHDFQPHVIVHCAAERRPDVVEN--QPDAASQLNVDASGNLAKEAAAV 101
Query: 123 NCKKL------VFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKADPE 176
+ VF G P E+ +N YG+TK E+ V + +
Sbjct: 102 GAFLIYISSDYVFD------GT--NPPYREEDIPAPLNLYGKTKLDGEKA---VLENNLG 150
Query: 177 WRII 180
++
Sbjct: 151 AAVL 154
|
| >3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} Length = 287 | Back alignment and structure |
|---|
Score = 52.5 bits (127), Expect = 5e-08
Identities = 31/184 (16%), Positives = 57/184 (30%), Gaps = 46/184 (25%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHV 64
+ +++TG G +G +L + + D+ L
Sbjct: 6 ERVIITGANGQLGKQLQEELNPEEYDIY-----------PFDK------KLL-------- 40
Query: 65 GDLRNKDDLDKLFSSQKFEAVIHFGALKAV--AESVQHPFRYFDNNLIGTINLYQAMAKY 122
D+ N + ++ + +IH A V AE + N IG N+ A
Sbjct: 41 -DITNISQVQQVVQEIRPHIIIHCAAYTKVDQAEK--ERDLAYVINAIGARNVAVASQLV 97
Query: 123 NCKKL------VFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKADPE 176
K + VF E +N YG +K E+ V++ +
Sbjct: 98 GAKLVYISTDYVFQGDRP-------EGYDEFHNPAPINIYGASKYAGEQF---VKELHNK 147
Query: 177 WRII 180
+ I+
Sbjct: 148 YFIV 151
|
| >3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 3r14_A* Length = 221 | Back alignment and structure |
|---|
Score = 51.2 bits (122), Expect = 9e-08
Identities = 23/201 (11%), Positives = 63/201 (31%), Gaps = 31/201 (15%)
Query: 6 NILVTGGAGFIGTHCALQLL-QGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHV 64
I + G AG I LL + L + + + ++
Sbjct: 7 YITILGAAGQIAQXLTATLLTYTDMHITLYGR----QLKTRIPPEIIDHE----RVTVIE 58
Query: 65 GDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNC 124
G +N L++ ++ E V + ++ +A+++ N
Sbjct: 59 GSFQNPGXLEQAVTNA--EVVFVGAM----------------ESGSDMASIVKALSRXNI 100
Query: 125 KKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKADPEWRIILLRY 184
++++ S A + G+ F Y + ++ + +++++ + I+ L +
Sbjct: 101 RRVIGVSMAGLSGEFPVALEKWTFD-NLPISYVQGERQARNV---LRESNLNYTILRLTW 156
Query: 185 FNPVGAHESGKLGEDPKGIPN 205
+L + +
Sbjct: 157 LYNDPEXTDYELIPEGAQFND 177
|
| >2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii} Length = 273 | Back alignment and structure |
|---|
Score = 51.4 bits (124), Expect = 1e-07
Identities = 31/160 (19%), Positives = 59/160 (36%), Gaps = 32/160 (20%)
Query: 6 NILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVG 65
L+TG +G +G +LL +V+ + + + G +L
Sbjct: 2 RTLITGASGQLG-IELSRLLSERHEVIKVY----------NSSEIQGGYKL--------- 41
Query: 66 DLRNKDDLDKLFSSQKFEAVIHFGALKAV--AESVQHPFRYFDNNLIGTINLYQAMAKYN 123
DL + L+ ++ + +I+ A+ V E + + N ++ +A +
Sbjct: 42 DLTDFPRLEDFIIKKRPDVIINAAAMTDVDKCEI--EKEKAYKINAEAVRHIVRAGKVID 99
Query: 124 CKKLVFSSSATIY---GQPEKIPCVEDFPYGAMNPYGRTK 160
+V S T Y G EK E+ +N YG +K
Sbjct: 100 S-YIVHIS--TDYVFDG--EKGNYKEEDIPNPINYYGLSK 134
|
| >3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} Length = 257 | Back alignment and structure |
|---|
Score = 50.3 bits (121), Expect = 2e-07
Identities = 30/136 (22%), Positives = 48/136 (35%), Gaps = 29/136 (21%)
Query: 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEF 62
+ +VTG + +G L Q G V+ +D + ++ A EL + F
Sbjct: 6 KSRVFIVTGASSGLGAAVTRMLAQEGATVLGLD-----LKP--PAGEEPAA-ELGAAVRF 57
Query: 63 HVGDLRNKDDLDKLFSSQKFEAVIHFGAL-------------KAVAESVQHPFRYFDN-- 107
D+ N+ D + A FG + K + S H F
Sbjct: 58 RNADVTNEADATAALA----FAKQEFGHVHGLVNCAGTAPGEKILGRSGPHALDSFARTV 113
Query: 108 --NLIGTINLYQAMAK 121
NLIGT N+ + A+
Sbjct: 114 AVNLIGTFNMIRLAAE 129
|
| >3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* Length = 346 | Back alignment and structure |
|---|
Score = 49.6 bits (118), Expect = 5e-07
Identities = 17/87 (19%), Positives = 31/87 (35%), Gaps = 5/87 (5%)
Query: 1 MASEK-NILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKK 59
+ S K +L+ G GFIG A L ++ P K L K
Sbjct: 6 VPSPKGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALE----DKG 61
Query: 60 LEFHVGDLRNKDDLDKLFSSQKFEAVI 86
G + ++ ++K+ + + V+
Sbjct: 62 AIIVYGLINEQEAMEKILKEHEIDIVV 88
|
| >3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} Length = 281 | Back alignment and structure |
|---|
Score = 48.8 bits (117), Expect = 7e-07
Identities = 17/87 (19%), Positives = 30/87 (34%), Gaps = 7/87 (8%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHV 64
K ++TG IG A L + G +VL P+ + V D + + H
Sbjct: 26 KTAVITGSTSGIGLAIARTLAKAGANIVLNG---FGAPDEIRTVTDEVAGLSSGTVLHHP 82
Query: 65 GDLRNKDDLDKLFSSQKFEAVIHFGAL 91
D+ ++ + + FG
Sbjct: 83 ADMTKPSEIADMMA----MVADRFGGA 105
|
| >3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} Length = 257 | Back alignment and structure |
|---|
Score = 48.4 bits (116), Expect = 8e-07
Identities = 24/140 (17%), Positives = 47/140 (33%), Gaps = 41/140 (29%)
Query: 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKL-- 60
+ +VTGGA +G +LL G +VV++ D+ G ++ L
Sbjct: 8 RDAVAVVTGGASGLGLATTKRLLDAGAQVVVL---------------DIRGEDVVADLGD 52
Query: 61 --EFHVGDLRNKDDLDKLFSSQKFEAVIHFGAL-------------KAVAESVQHPFRYF 105
F D+ ++ + + G L + ++ F
Sbjct: 53 RARFAAADVTDEAAVASA-----LDLAETMGTLRIVVNCAGTGNAIRVLSRDGVFSLAAF 107
Query: 106 DN----NLIGTINLYQAMAK 121
NL+G+ N+ + A+
Sbjct: 108 RKIVDINLVGSFNVLRLAAE 127
|
| >2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* Length = 265 | Back alignment and structure |
|---|
Score = 48.4 bits (116), Expect = 9e-07
Identities = 28/136 (20%), Positives = 48/136 (35%), Gaps = 31/136 (22%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHV 64
++TGGA +G A +L+ G VL+D +P + A +L F
Sbjct: 13 LVAVITGGASGLGLATAERLVGQGASAVLLD-----LPN--SGGEAQA-KKLGNNCVFAP 64
Query: 65 GDLRNKDDLDKLFSSQKFEAVIHFGALKAV---------------AESVQHPFRYFDN-- 107
D+ ++ D+ + A FG + + H F
Sbjct: 65 ADVTSEKDVQTALA----LAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVL 120
Query: 108 --NLIGTINLYQAMAK 121
NL+GT N+ + +A
Sbjct: 121 DVNLMGTFNVIRLVAG 136
|
| >3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} Length = 260 | Back alignment and structure |
|---|
Score = 48.3 bits (116), Expect = 1e-06
Identities = 21/130 (16%), Positives = 43/130 (33%), Gaps = 26/130 (20%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHV 64
IL+TG + +G HCAL+LL+ G +V++ + + +V ++ L
Sbjct: 28 APILITGASQRVGLHCALRLLEHGHRVII---SYRTEHASVTELRQAGAVALY------- 77
Query: 65 GDLRNKDDLDKLFSSQKFEAVIHFGAL------------KAVAESVQHPFRYFDNNLIGT 112
GD + + +L + E + R F +++
Sbjct: 78 GDFSCETGIMAFID----LLKTQTSSLRAVVHNASEWLAETPGEEADNFTRMFSVHMLAP 133
Query: 113 INLYQAMAKY 122
+
Sbjct: 134 YLINLHCEPL 143
|
| >1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* Length = 254 | Back alignment and structure |
|---|
Score = 48.0 bits (115), Expect = 1e-06
Identities = 15/88 (17%), Positives = 30/88 (34%), Gaps = 9/88 (10%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHV 64
KN++ G IG + +L++ K +I + E + +L + FH
Sbjct: 6 KNVIFVAALGGIGLDTSRELVKRNLKNFVILDR----VENPTALAELKAINPKVNITFHT 61
Query: 65 GDL-RNKDDLDKLFSSQKFEAVIHFGAL 91
D+ + KL + +
Sbjct: 62 YDVTVPVAESKKLLK----KIFDQLKTV 85
|
| >1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* Length = 260 | Back alignment and structure |
|---|
Score = 48.0 bits (115), Expect = 1e-06
Identities = 20/91 (21%), Positives = 32/91 (35%), Gaps = 7/91 (7%)
Query: 1 MASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKL 60
M K +VTG IG A L G +VL +++V+ + K+
Sbjct: 1 MLKGKVAVVTGSTSGIGLGIATALAAQGADIVLNG---FGDAAEIEKVRAGLAAQHGVKV 57
Query: 61 EFHVGDLRNKDDLDKLFSSQKFEAVIHFGAL 91
+ DL + + L AV G +
Sbjct: 58 LYDGADLSKGEAVRGLVD----NAVRQMGRI 84
|
| >1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A* Length = 321 | Back alignment and structure |
|---|
Score = 48.3 bits (116), Expect = 1e-06
Identities = 29/135 (21%), Positives = 51/135 (37%), Gaps = 40/135 (29%)
Query: 218 RHPELNVYGQDYPTKDGSAVRDYIHVMDLADGCIA-------------------YNLGNG 258
+ P++ V+G G+ +R+++HV D+A I N+G G
Sbjct: 195 KAPDVVVWG------SGTPMREFLHVDDMAAASIHVMELAHEVWLENTQPMLSHINVGTG 248
Query: 259 KGISVLEMVAAFEKASGKKIPIKF-------CPRRVGDATAVYAATDKAHKELGWKPKYG 311
++ E+ K G K + F PR++ D + H+ LGW +
Sbjct: 249 VDCTIRELAQTIAKVVGYKGRVVFDASKPDGTPRKLLD-------VTRLHQ-LGWYHEIS 300
Query: 312 IEDMCAHQWNWAKNN 326
+E A + W N
Sbjct: 301 LEAGLASTYQWFLEN 315
|
| >1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A* Length = 321 | Back alignment and structure |
|---|
Score = 40.6 bits (96), Expect = 4e-04
Identities = 28/147 (19%), Positives = 58/147 (39%), Gaps = 28/147 (19%)
Query: 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEF 62
+++ + + G G +G+ QL Q G +++ R +L
Sbjct: 2 AKQRVFIAGHRGMVGSAIRRQLEQRGDVELVL----------RTR-DEL----------- 39
Query: 63 HVGDLRNKDDLDKLFSSQKFEAVIHFGALKA--VAESVQHPFRYFDNNLIGTINLYQAMA 120
+L + + F+S++ + V A K + + +P + N++ N+ A
Sbjct: 40 ---NLLDSRAVHDFFASERIDQVYLAAA-KVGGIVANNTYPADFIYQNMMIESNIIHAAH 95
Query: 121 KYNCKKLVFSSSATIYGQPEKIPCVED 147
+ + KL+F S+ IY + K P E
Sbjct: 96 QNDVNKLLFLGSSCIYPKLAKQPMAES 122
|
| >3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} Length = 235 | Back alignment and structure |
|---|
Score = 47.2 bits (113), Expect = 2e-06
Identities = 27/129 (20%), Positives = 49/129 (37%), Gaps = 25/129 (19%)
Query: 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEF 62
S +I+VTG +G + L++ G +V ++ R++ L +
Sbjct: 2 SLGHIIVTGAGSGLGRALTIGLVERGHQVSMMG-------RRYQRLQQQEL-LLGNAVIG 53
Query: 63 HVGDLRNKDDLDKLFSSQKFEAVIHFGAL------------KAVAE-SVQHPFRYFDNNL 109
V DL + +D+D F+ AV G V + + R ++NL
Sbjct: 54 IVADLAHHEDVDVAFA----AAVEWGGLPELVLHCAGTGEFGPVGVYTAEQIRRVMESNL 109
Query: 110 IGTINLYQA 118
+ TI + Q
Sbjct: 110 VSTILVAQQ 118
|
| >3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} Length = 230 | Back alignment and structure |
|---|
Score = 46.4 bits (111), Expect = 3e-06
Identities = 22/126 (17%), Positives = 44/126 (34%), Gaps = 18/126 (14%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEA--VDRVKDLAGPELAKKLEF 62
I++TG + +G A G L ++ + L+ + +
Sbjct: 2 SLIVITGASSGLGAELAKLYDAEGKATYLT---------GRSESKLSTVTN-CLSNNVGY 51
Query: 63 HVGDLRNKDDLDKLFSS--QKFEAVIH---FGALKAVAE-SVQHPFRYFDNNLIGTINLY 116
DL + ++++LF V+H G + E + +NNL IN+
Sbjct: 52 RARDLASHQEVEQLFEQLDSIPSTVVHSAGSGYFGLLQEQDPEQIQTLIENNLSSAINVL 111
Query: 117 QAMAKY 122
+ + K
Sbjct: 112 RELVKR 117
|
| >1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 Length = 303 | Back alignment and structure |
|---|
Score = 46.5 bits (111), Expect = 4e-06
Identities = 20/87 (22%), Positives = 39/87 (44%), Gaps = 4/87 (4%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHV 64
+ +VTGGA IG +LL+ G VV+ + A D ++ P ++
Sbjct: 19 QVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQ 78
Query: 65 GDLRNKDDLDKLFSSQKFEAVIHFGAL 91
++RN+++++ L + FG +
Sbjct: 79 CNIRNEEEVNNLVK----STLDTFGKI 101
|
| >3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} Length = 281 | Back alignment and structure |
|---|
Score = 46.4 bits (111), Expect = 5e-06
Identities = 19/87 (21%), Positives = 34/87 (39%), Gaps = 6/87 (6%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHV 64
+ LVTGG IG A L+ G V+++ + + AV ++ L + +
Sbjct: 12 RTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGAN--GGAIRYEP 69
Query: 65 GDLRNKDDLDKLFSSQKFEAVIHFGAL 91
D+ N+D+ + G L
Sbjct: 70 TDITNEDETARAVD----AVTAWHGRL 92
|
| >2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A Length = 255 | Back alignment and structure |
|---|
Score = 46.0 bits (110), Expect = 5e-06
Identities = 22/87 (25%), Positives = 31/87 (35%), Gaps = 11/87 (12%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHV 64
K LVTG IG A L + G +VL A+ + K H
Sbjct: 5 KTALVTGSTSGIGLGIAQVLARAGANIVLNGF--GDPAPALAEIARHGV-----KAVHHP 57
Query: 65 GDLRNKDDLDKLFSSQKFEAVIHFGAL 91
DL + ++ LF+ A FG +
Sbjct: 58 ADLSDVAQIEALFA----LAEREFGGV 80
|
| >3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} Length = 281 | Back alignment and structure |
|---|
Score = 46.1 bits (110), Expect = 7e-06
Identities = 26/130 (20%), Positives = 46/130 (35%), Gaps = 22/130 (16%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHV 64
+ +V+GGAG +G +L G VV+ D + ++ K LA EL + EF
Sbjct: 31 ASAIVSGGAGGLGEATVRRLHADGLGVVIAD-----LAA--EKGKALA-DELGNRAEFVS 82
Query: 65 GDLRNKDDLDKLFSS--QKFE--------AVIHFGALKAVAESVQHPFRYFDN----NLI 110
++ ++D + + Q + F L
Sbjct: 83 TNVTSEDSVLAAIEAANQLGRLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLN 142
Query: 111 GTINLYQAMA 120
GT N+ + +A
Sbjct: 143 GTYNVARLVA 152
|
| >4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} Length = 281 | Back alignment and structure |
|---|
Score = 45.7 bits (109), Expect = 8e-06
Identities = 20/87 (22%), Positives = 32/87 (36%), Gaps = 8/87 (9%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHV 64
+ LVTGG +G A L G+ VV+ + + A + G + V
Sbjct: 34 RIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTG----NIVRAVV 89
Query: 65 GDLRNKDDLDKLFSSQKFEAVIHFGAL 91
D+ + D + LF+ F L
Sbjct: 90 CDVGDPDQVAALFA----AVRAEFARL 112
|
| >4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} Length = 273 | Back alignment and structure |
|---|
Score = 45.2 bits (108), Expect = 1e-05
Identities = 26/156 (16%), Positives = 45/156 (28%), Gaps = 38/156 (24%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHV 64
K ++TG IG A + + G +V + + +D G
Sbjct: 30 KIAVITGATSGIGLAAAKRFVAEGARVFITG----RRKDVLDAAIAEIGGGAV----GIQ 81
Query: 65 GDLRNKDDLDKLFSSQKFEAVIHFGAL------------KAVAE-SVQHPFRYFDNNLIG 111
D N +LD+L+ + G + + E + + FD N+ G
Sbjct: 82 ADSANLAELDRLYE----KVKAEAGRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKG 137
Query: 112 TINLYQAMAKY--------NCKKLVFSSSATIYGQP 139
+ Q S+A G P
Sbjct: 138 VLFTVQKALPLLARGSSVVLT-----GSTAGSTGTP 168
|
| >2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A Length = 242 | Back alignment and structure |
|---|
Score = 45.2 bits (107), Expect = 1e-05
Identities = 30/166 (18%), Positives = 46/166 (27%), Gaps = 37/166 (22%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHV 64
K++ + G +G G ++L+ L + V + R K E K + V
Sbjct: 19 KSVFILGASGETGRVLLKEILE--------QGLFSKV-TLIGRRKLTFDEEAYKNVNQEV 69
Query: 65 GDLRNKDDLDKLFSSQKFEAVIH-FGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYN 123
D DD F Q + G + A + F D + +
Sbjct: 70 VDFEKLDDYASAF--QGHDVGFCCLGTTRGKAGAEG--FVRVD--RDYVLKSAELAKAGG 123
Query: 124 CKKLVFSSSATIYGQPEKIPCVEDFPYGA----MNPYGRTKQWCEE 165
CK SS GA Y + K E
Sbjct: 124 CKHFNLLSSK-----------------GADKSSNFLYLQVKGEVEA 152
|
| >1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A* Length = 299 | Back alignment and structure |
|---|
Score = 45.3 bits (108), Expect = 1e-05
Identities = 36/183 (19%), Positives = 59/183 (32%), Gaps = 43/183 (23%)
Query: 6 NILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVG 65
NIL+ G G +G + L ++ A+D E G
Sbjct: 2 NILLFGKTGQVG-WELQRSLAPVGNLI-----------ALDV----HSKEFC-------G 38
Query: 66 DLRNKDDLDKLFSSQKFEAVIHFGALKAV--AESVQHPFRYFDNNLIGTINLYQAMAKYN 123
D N + + + + +++ A AV AES P N + +A +
Sbjct: 39 DFSNPKGVAETVRKLRPDVIVNAAAHTAVDKAES--EPELAQLLNATSVEAIAKAANETG 96
Query: 124 CKKL------VFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKADPEW 177
+ VF + I P E +N YG+TK E+ +Q P+
Sbjct: 97 AWVVHYSTDYVFPGTGDI-------PWQETDATSPLNVYGKTKLAGEKA---LQDNCPKH 146
Query: 178 RII 180
I
Sbjct: 147 LIF 149
|
| >1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 Length = 256 | Back alignment and structure |
|---|
Score = 45.2 bits (108), Expect = 1e-05
Identities = 27/135 (20%), Positives = 45/135 (33%), Gaps = 28/135 (20%)
Query: 4 EKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFH 63
+K LVTG IG AL+L++ GF V + D + + G +A
Sbjct: 2 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVA-----V 56
Query: 64 VGDLRNKDDLDKLFSSQKFEAVIHFGAL----------------KAVAESVQHPFRYFDN 107
D+ ++D + +A G E V + ++
Sbjct: 57 KVDVSDRDQVFAAVE----QARKTLGGFDVIVNNAGVAPSTPIESITPEIVD---KVYNI 109
Query: 108 NLIGTINLYQAMAKY 122
N+ G I QA +
Sbjct: 110 NVKGVIWGIQAAVEA 124
|
| >3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} Length = 260 | Back alignment and structure |
|---|
Score = 45.2 bits (108), Expect = 1e-05
Identities = 18/87 (20%), Positives = 33/87 (37%), Gaps = 9/87 (10%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHV 64
+ +VTGGA IG C L + G +V++ D +AV+ ++ + V
Sbjct: 14 RVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGH-----DVSSVV 68
Query: 65 GDLRNKDDLDKLFSSQKFEAVIHFGAL 91
D+ N + + G +
Sbjct: 69 MDVTNTESVQNAVR----SVHEQEGRV 91
|
| >2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 Length = 267 | Back alignment and structure |
|---|
Score = 44.9 bits (107), Expect = 1e-05
Identities = 26/87 (29%), Positives = 36/87 (41%), Gaps = 7/87 (8%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHV 64
K LVTG A IG A LL G KV L+D + + + + P+ F
Sbjct: 8 KVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTL---FIQ 64
Query: 65 GDLRNKDDLDKLFSSQKFEAVIHFGAL 91
D+ ++ L F + V HFG L
Sbjct: 65 CDVADQQQLRDTFR----KVVDHFGRL 87
|
| >1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 Length = 265 | Back alignment and structure |
|---|
Score = 44.9 bits (107), Expect = 1e-05
Identities = 21/87 (24%), Positives = 34/87 (39%), Gaps = 8/87 (9%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHV 64
K I+VTGG IG + G V +I S +AV+ + + E K + +
Sbjct: 15 KTIIVTGGNRGIGLAFTRAVAAAGANVAVIY---RSAADAVEVTEKVGK-EFGVKTKAYQ 70
Query: 65 GDLRNKDDLDKLFSSQKFEAVIHFGAL 91
D+ N D + K + G +
Sbjct: 71 CDVSNTDIVTKTIQ----QIDADLGPI 93
|
| >3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} Length = 321 | Back alignment and structure |
|---|
Score = 45.3 bits (107), Expect = 1e-05
Identities = 22/134 (16%), Positives = 43/134 (32%), Gaps = 24/134 (17%)
Query: 2 ASEK-NILVTGGAGFIGTHCALQLLQGGFKVVLI--DNLHNSVPEAVDRVKDLAGPELAK 58
S I++ GG G+IG L + +S P +V ++ +
Sbjct: 1 GSHMEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFR----SM 56
Query: 59 KLEFHVGDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQA 118
+ G++ + + + ++ + VI AL S Q I++ A
Sbjct: 57 GVTIIEGEMEEHEKMVSVL--KQVDIVIS--ALPFPMISSQ-------------IHIINA 99
Query: 119 MAKYNCKKLVFSSS 132
+ K S
Sbjct: 100 IKAAGNIKRFLPSD 113
|
| >3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} Length = 257 | Back alignment and structure |
|---|
Score = 44.8 bits (107), Expect = 2e-05
Identities = 20/87 (22%), Positives = 39/87 (44%), Gaps = 9/87 (10%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHV 64
K +++TGG+ +G A + + G +VV+ + EA ++ G ++
Sbjct: 7 KVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPG-----QILTVQ 61
Query: 65 GDLRNKDDLDKLFSSQKFEAVIHFGAL 91
D+RN DD+ K+ + FG +
Sbjct: 62 MDVRNTDDIQKMIE----QIDEKFGRI 84
|
| >1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 242 | Back alignment and structure |
|---|
Score = 44.5 bits (106), Expect = 2e-05
Identities = 29/135 (21%), Positives = 48/135 (35%), Gaps = 39/135 (28%)
Query: 4 EKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFH 63
E++ LVTGGA +G AL L G++VV++D + L +
Sbjct: 2 ERSALVTGGASGLGRAAALALKARGYRVVVLDL-----------------RREGEDLIYV 44
Query: 64 VGDLRNKDDLDKLFSSQKFEAVIHFGAL-------------KAVAESVQHPFRYFDN--- 107
GD+ ++D+ + L K + + H F
Sbjct: 45 EGDVTREEDVRRA-----VARAQEEAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLE 99
Query: 108 -NLIGTINLYQAMAK 121
NL+GT N+ + A
Sbjct: 100 VNLLGTFNVLRLAAW 114
|
| >4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} Length = 272 | Back alignment and structure |
|---|
Score = 44.5 bits (106), Expect = 2e-05
Identities = 34/167 (20%), Positives = 55/167 (32%), Gaps = 42/167 (25%)
Query: 1 MASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEA---VDRVKDLAGPELA 57
M+ +LVTGG+ IG + G++V + N + A V + + G +A
Sbjct: 23 MSDTPVVLVTGGSRGIGAAVCRLAARQGWRVGV--NYAANREAADAVVAAITESGGEAVA 80
Query: 58 KKLEFHVGDLRNKDDLDKLFSSQKFEAVIHFGALKAV-----------------AESVQH 100
GD+ N D+ +FS FG L + E ++
Sbjct: 81 IP-----GDVGNAADIAAMFS----AVDRQFGRLDGLVNNAGIVDYPQRVDEMSVERIE- 130
Query: 101 PFRYFDNNLIGTINLYQAMAKYNCKKLV--------FSSSATIYGQP 139
R N+ G+I + + SS A I G
Sbjct: 131 --RMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILGSA 175
|
| >1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 236 | Back alignment and structure |
|---|
Score = 43.8 bits (104), Expect = 2e-05
Identities = 21/172 (12%), Positives = 48/172 (27%), Gaps = 44/172 (25%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHV 64
++V GG G +G+ + G+ V+ I DL+ + A
Sbjct: 4 GKVIVYGGKGALGSAILEFFKKNGYTVLNI---------------DLSANDQADSNILVD 48
Query: 65 GDLRNKDDLDKLFSSQKFEAVIHFGAL-------------KAVAESVQHPF-RYFDNNLI 110
G+ + + ++ + + + A ++ ++
Sbjct: 49 GNKNWTEQEQSIL--EQTASSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVW 106
Query: 111 GTINLYQAMAKYNCK--KLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTK 160
+ + + L + +A G P +M YG K
Sbjct: 107 SSAIAAKLATTHLKPGGLLQLTGAAAAMG-----------PTPSMIGYGMAK 147
|
| >3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} Length = 251 | Back alignment and structure |
|---|
Score = 44.2 bits (105), Expect = 2e-05
Identities = 16/57 (28%), Positives = 22/57 (38%), Gaps = 3/57 (5%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVK-DLAGPELAKKL 60
KNILV GG+G +G + + ID P A +G E K +
Sbjct: 23 KNILVLGGSGALGAEVVKFFKSKSWNTISID--FRENPNADHSFTIKDSGEEEIKSV 77
|
| >3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} Length = 254 | Back alignment and structure |
|---|
Score = 44.2 bits (105), Expect = 2e-05
Identities = 21/87 (24%), Positives = 32/87 (36%), Gaps = 10/87 (11%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHV 64
K ILVTG + IG L V+ V + +K L + + + V
Sbjct: 3 KVILVTGVSRGIGKSIVDVLFSLDKDTVV-----YGVARSEAPLKKLKE-KYGDRFFYVV 56
Query: 65 GDLRNKDDLDKLFSSQKFEAVIHFGAL 91
GD+ L +L + AV G +
Sbjct: 57 GDITEDSVLKQLVN----AAVKGHGKI 79
|
| >2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A* Length = 345 | Back alignment and structure |
|---|
Score = 44.1 bits (105), Expect = 3e-05
Identities = 60/310 (19%), Positives = 111/310 (35%), Gaps = 83/310 (26%)
Query: 58 KKLEFHVGDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQ 117
++ DL ++ + + + V + A V S + P + + IG + + +
Sbjct: 52 NDVKIIHMDLLEFSNIIRTIEKVQPDEVYNLAAQSFVGVSFEQPILTAEVDAIGVLRILE 111
Query: 118 AMAKYNCK-KLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKADPE 176
A+ K +S++ ++G+ ++IP E P+ +PY K +
Sbjct: 112 ALRTVKPDTKFYQASTSEMFGKVQEIPQTEKTPFYPRSPYAVAKLF----GH-------- 159
Query: 177 WRIILLR--Y---------FNPVGAHESGKLGED--PKGIPNNLMPYIQQVAVGRHPELN 223
W + R Y FN HES G + + I +L ++ G +L
Sbjct: 160 WITVNYREAYNMFACSGILFN----HESPLRGIEFVTRKITYSL----ARIKYGLQDKLV 211
Query: 224 VYGQDYPTKD-GSAVRDYIHVM------DLADGCIAYNLGNGKGISVLEMV-AAFE---- 271
+ G +D G A +Y+ M D Y + G+ +V E V A +
Sbjct: 212 L-GNLNAKRDWGYA-PEYVEAMWLMMQQPEPDD---YVIATGETHTVREFVEKAAKIAGF 266
Query: 272 ---------------KASGKKIPIKFCPR--R-------VGDATAVYAATDKAHKELGWK 307
+ +GK I ++ R VG+ KA K+LGWK
Sbjct: 267 DIEWVGEGINEKGIDRNTGKVI-VEVSEEFFRPAEVDILVGNPE-------KAMKKLGWK 318
Query: 308 PKYGIEDMCA 317
P+ +++
Sbjct: 319 PRTTFDELVE 328
|
| >3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} Length = 202 | Back alignment and structure |
|---|
Score = 43.4 bits (103), Expect = 3e-05
Identities = 20/128 (15%), Positives = 42/128 (32%), Gaps = 32/128 (25%)
Query: 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLE 61
++ IL+ G +G +G+ +L + +V+ +
Sbjct: 1 SNAMKILLIGASGTLGSAVKERLEKKA-EVITA----------------------GRHSG 37
Query: 62 FHVGDLRNKDDLDKLFSSQ-KFEAVI------HFGALKAVAESVQHPFRYFDNNLIGTIN 114
D+ N D + K++ K +A++ F L + + + + L G IN
Sbjct: 38 DVTVDITNIDSIKKMYEQVGKVDAIVSATGSATFSPLTEL--TPEKNAVTISSKLGGQIN 95
Query: 115 LYQAMAKY 122
L
Sbjct: 96 LVLLGIDS 103
|
| >3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} Length = 276 | Back alignment and structure |
|---|
Score = 43.7 bits (104), Expect = 3e-05
Identities = 16/87 (18%), Positives = 31/87 (35%), Gaps = 9/87 (10%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHV 64
K L+TG + IG AL + G +V + +++ D + + G K
Sbjct: 33 KRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGG-----KALPIR 87
Query: 65 GDLRNKDDLDKLFSSQKFEAVIHFGAL 91
D+ D + + + G +
Sbjct: 88 CDVTQPDQVRGMLD----QMTGELGGI 110
|
| >3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} Length = 258 | Back alignment and structure |
|---|
Score = 43.7 bits (104), Expect = 4e-05
Identities = 23/136 (16%), Positives = 43/136 (31%), Gaps = 30/136 (22%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHN--SVPEAVDRVKDLAGPELAKKLEF 62
K +VTGGA IG + +L GF + + D E + ++ +
Sbjct: 3 KVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVF----- 57
Query: 63 HVGDLRNKDDLDKLFSSQKFEAVIHFGAL----------------KAVAESVQHPFRYFD 106
D+ +K + D EA G + E ++ + +
Sbjct: 58 VGLDVTDKANFDSAID----EAAEKLGGFDVLVNNAGIAQIKPLLEVTEEDLK---QIYS 110
Query: 107 NNLIGTINLYQAMAKY 122
N+ QA ++
Sbjct: 111 VNVFSVFFGIQAASRK 126
|
| >3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} Length = 252 | Back alignment and structure |
|---|
Score = 43.4 bits (103), Expect = 4e-05
Identities = 21/153 (13%), Positives = 43/153 (28%), Gaps = 28/153 (18%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHV 64
+ V G +IG A + GF V + V ++ G ++
Sbjct: 8 ATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGG-----RIVARS 62
Query: 65 GDLRNKDDLDKLFSSQKFEAVIHFGALKAV----AESVQHPF---------RYFDNNLIG 111
D RN+D++ A L+ +V P + ++
Sbjct: 63 LDARNEDEVTAF-----LNAADAHAPLEVTIFNVGANVNFPILETTDRVFRKVWEMACWA 117
Query: 112 TINLYQAMAKYNCKK-----LVFSSSATIYGQP 139
+ A+ ++A++ G
Sbjct: 118 GFVSGRESARLMLAHGQGKIFFTGATASLRGGS 150
|
| >1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2 Length = 375 | Back alignment and structure |
|---|
Score = 43.8 bits (104), Expect = 5e-05
Identities = 70/332 (21%), Positives = 123/332 (37%), Gaps = 89/332 (26%)
Query: 55 ELAKKLEFHVGDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTIN 114
+ ++ H GDL + L K+ + K + + GA V S D + +GT+
Sbjct: 76 HIEGNMKLHYGDLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLR 135
Query: 115 LYQAMAKYNCKKLV---FSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQWCEEIAFDVQ 171
L A+ V +S++ +YG+ ++IP E P+ +PYG K + A+
Sbjct: 136 LLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAAKLY----AY--- 188
Query: 172 KADPEWRIILLR--Y---------FNPVGAHESGKLGED--PKGIPNNLMPYIQQVAVGR 218
W ++ R Y FN HES + G + + I ++ ++ +G+
Sbjct: 189 -----WIVVNFREAYNLFAVNGILFN----HESPRRGANFVTRKISRSVA----KIYLGQ 235
Query: 219 HPELNVYGQDYPTKD-GSAVRDYIHVM------DLADGCIAYNLGNGKGISVLEMV-AAF 270
++ G +D G A +DY+ M D + + + G+ SV E V +F
Sbjct: 236 LECFSL-GNLDAKRDWGHA-KDYVEAMWLMLQNDEPED---FVIATGEVHSVREFVEKSF 290
Query: 271 E-------------------KASGKKIPIKFCPR--R-------VGDATAVYAATDKAHK 302
K +GK + + R GD T KA +
Sbjct: 291 LHIGKTIVWEGKNENEVGRCKETGKVH-VTVDLKYYRPTEVDFLQGDCT-------KAKQ 342
Query: 303 ELGWKPKYGIE----DMCAHQWNWAKNNPMGY 330
+L WKP+ + +M + NP
Sbjct: 343 KLNWKPRVAFDELVREMVHADVELMRTNPNAG 374
|
| >4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} Length = 272 | Back alignment and structure |
|---|
Score = 43.0 bits (102), Expect = 6e-05
Identities = 19/89 (21%), Positives = 32/89 (35%), Gaps = 12/89 (13%)
Query: 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEF 62
+K +VTG +G A+ L G+ V L +A+ G +
Sbjct: 27 GKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGR----RLDALQETAAEIGDD----ALC 78
Query: 63 HVGDLRNKDDLDKLFSSQKFEAVIHFGAL 91
D+ + D + LF+ V FG +
Sbjct: 79 VPTDVTDPDSVRALFT----ATVEKFGRV 103
|
| >1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 Length = 267 | Back alignment and structure |
|---|
Score = 42.9 bits (102), Expect = 6e-05
Identities = 17/87 (19%), Positives = 35/87 (40%), Gaps = 7/87 (8%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHV 64
+ +L+TGG +G A++L G K+ L+D + + V + A V
Sbjct: 14 RVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVL---TTV 70
Query: 65 GDLRNKDDLDKLFSSQKFEAVIHFGAL 91
D+ ++ ++ + FG +
Sbjct: 71 ADVSDEAQVEAYVT----ATTERFGRI 93
|
| >2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A Length = 299 | Back alignment and structure |
|---|
Score = 43.1 bits (102), Expect = 7e-05
Identities = 54/315 (17%), Positives = 86/315 (27%), Gaps = 76/315 (24%)
Query: 1 MASEKNILVTGGAGFIGTHCALQLLQ-GGFKVVLIDNLHNSVPEAVDR-VKDLAGPELAK 58
M +K ++V GG G G A LL+ G FKV V R + A EL
Sbjct: 2 MVDKKLVVVFGGTGAQGGSVARTLLEDGTFKVR-----------VVTRNPRKKAAKELRL 50
Query: 59 K-LEFHVGDLRNKDDLDKLFSSQK--FEAVIHFGALKAVAESVQHPFRYFDNNLIGTINL 115
+ E GD ++ ++ + F ++ + E Q L
Sbjct: 51 QGAEVVQGDQDDQVIMELALNGAYATFIVTNYWESCSQEQEVKQG------------KLL 98
Query: 116 YQAMAKYNCKKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKADP 175
+ +V+S + + K EE +
Sbjct: 99 ADLARRLGLHYVVYSGL---------ENIKKLTAGRLAAAHFDGKGEVEEY---FRDIGV 146
Query: 176 EWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGS 235
+ L + N L ++ Q A P+ Y PT D
Sbjct: 147 PMTSVRLPCY-----------------FENLLSHFLPQKA----PDGKSYLLSLPTGDVP 185
Query: 236 AVRDYIHVMDLADGCIAYNLGN-----GKGI-------SVLEMVAAFEKASGKKIPIKFC 283
D + V DL + L G+ I + E A K + K +
Sbjct: 186 M--DGMSVSDLGP-VVLSLLKMPEKYVGQNIGLSTCRHTAEEYAALLTKHTRKVVHDAKM 242
Query: 284 PRRVGDATAVYAATD 298
+ A D
Sbjct: 243 TPEDYEKLGFPGARD 257
|
| >3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} Length = 279 | Back alignment and structure |
|---|
Score = 42.9 bits (102), Expect = 7e-05
Identities = 18/87 (20%), Positives = 32/87 (36%), Gaps = 9/87 (10%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHV 64
K VTG +G IG A Q G V + N H + +A K + +
Sbjct: 35 KVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGV-----HSKAYK 89
Query: 65 GDLRNKDDLDKLFSSQKFEAVIHFGAL 91
++ + +++ S + FG +
Sbjct: 90 CNISDPKSVEETIS----QQEKDFGTI 112
|
| >1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 280 | Back alignment and structure |
|---|
Score = 42.6 bits (101), Expect = 8e-05
Identities = 22/137 (16%), Positives = 46/137 (33%), Gaps = 23/137 (16%)
Query: 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEF 62
S K +++TG + IG A+ Q G V + + E + E K++
Sbjct: 5 SNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSE--KQVNS 62
Query: 63 HVGDLRNKDDLDKLFSSQKFEAVIHFGAL----------------KAVAESVQHPF-RYF 105
V D+ +D D++ + + FG + + + +
Sbjct: 63 VVADVTTEDGQDQIIN----STLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTL 118
Query: 106 DNNLIGTINLYQAMAKY 122
NL I + + + +
Sbjct: 119 KLNLQAVIEMTKKVKPH 135
|
| >4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* Length = 277 | Back alignment and structure |
|---|
Score = 42.6 bits (101), Expect = 8e-05
Identities = 23/141 (16%), Positives = 41/141 (29%), Gaps = 41/141 (29%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHV 64
K +TGG IG A ++ G V+ V A ++ G ++
Sbjct: 28 KVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATG----RRCLPLS 83
Query: 65 GDLRNKDDLDKLFSSQKFEAVIHFGAL-----------------------KAVAESVQHP 101
D+R + +A+ FG + K V
Sbjct: 84 MDVRAPPAVMAAVD----QALKEFGRIDILINCAAGNFLCPAGALSFNAFKTV------- 132
Query: 102 FRYFDNNLIGTINLYQAMAKY 122
D + GT N+ + + +
Sbjct: 133 ---MDIDTSGTFNVSRVLYEK 150
|
| >1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* Length = 302 | Back alignment and structure |
|---|
Score = 42.6 bits (101), Expect = 9e-05
Identities = 22/141 (15%), Positives = 39/141 (27%), Gaps = 41/141 (29%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHV 64
K +TGG +G L G + V+ + + +++ G K+
Sbjct: 27 KVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTG----NKVHAIQ 82
Query: 65 GDLRNKDDLDKLFSSQKFEAVIHFGAL-----------------------KAVAESVQHP 101
D+R+ D + S E + G K +
Sbjct: 83 CDVRDPDMVQNTVS----ELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTI------- 131
Query: 102 FRYFDNNLIGTINLYQAMAKY 122
D L GT + + K
Sbjct: 132 ---TDIVLNGTAFVTLEIGKQ 149
|
| >4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} Length = 244 | Back alignment and structure |
|---|
Score = 42.1 bits (100), Expect = 9e-05
Identities = 19/78 (24%), Positives = 29/78 (37%), Gaps = 14/78 (17%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHV 64
N LVTGG+ IG LLQ V+ +D + + + L+F
Sbjct: 5 ANYLVTGGSKGIGKAVVELLLQNKNHTVI----------NIDIQQSFSA----ENLKFIK 50
Query: 65 GDLRNKDDLDKLFSSQKF 82
DL + D+ + K
Sbjct: 51 ADLTKQQDITNVLDIIKN 68
|
| >2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2 Length = 215 | Back alignment and structure |
|---|
Score = 41.9 bits (99), Expect = 9e-05
Identities = 29/170 (17%), Positives = 50/170 (29%), Gaps = 46/170 (27%)
Query: 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAK--KL 60
+ K +L+ G G G H ++L + +V A LA+ +L
Sbjct: 4 TPKRVLLAGATGLTGEHLLDRILSEP---------------TLAKVIAPARKALAEHPRL 48
Query: 61 EFHVGDLRNKDDLDKLFSSQKFEAVIH-FGALKAVAESVQHPFRYFDNNLIGTINLYQAM 119
+ VG L + G A S + FR D +L + + +
Sbjct: 49 DNPVGPLAELLPQLD----GSIDTAFCCLGTTIKEAGSEEA-FRAVDFDL--PLAVGKRA 101
Query: 120 AKYNCKKLVFSSSATIYGQPEKIPCVEDFPYGA----MNPYGRTKQWCEE 165
+ + + S+ GA Y R K E+
Sbjct: 102 LEMGARHYLVVSAL-----------------GADAKSSIFYNRVKGELEQ 134
|
| >3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} Length = 263 | Back alignment and structure |
|---|
Score = 42.5 bits (101), Expect = 9e-05
Identities = 16/87 (18%), Positives = 30/87 (34%), Gaps = 12/87 (13%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHV 64
+ +VTGG+ IG A L + G V + D + V +++
Sbjct: 13 RKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENGG--------FAVE 64
Query: 65 GDLRNKDDLDKLFSSQKFEAVIHFGAL 91
D+ + +D +A+ G
Sbjct: 65 VDVTKRASVDAAMQ----KAIDALGGF 87
|
| >3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} Length = 279 | Back alignment and structure |
|---|
Score = 42.6 bits (101), Expect = 9e-05
Identities = 20/91 (21%), Positives = 34/91 (37%), Gaps = 9/91 (9%)
Query: 1 MASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKL 60
M+ + VTG + IG A L G V +V AVD ++ +
Sbjct: 21 MSRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGH-----DV 75
Query: 61 EFHVGDLRNKDDLDKLFSSQKFEAVIHFGAL 91
+ D+ + D++ + AV FG +
Sbjct: 76 DGSSCDVTSTDEVHAAVA----AAVERFGPI 102
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 43.3 bits (101), Expect = 1e-04
Identities = 54/359 (15%), Positives = 109/359 (30%), Gaps = 122/359 (33%)
Query: 3 SEKNILVTGGAGFIGTHC-ALQLLQG-------GFKVVLIDNLHNSVPEAV-DRVKDL-- 51
KN+L+ G G G AL + FK+ ++ + + PE V + ++ L
Sbjct: 149 PAKNVLIDGVLGS-GKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLY 207
Query: 52 -------AGPELAKKLEFHVGDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHP--F 102
+ + + ++ + + + +L +L S+ +E L V +VQ+ +
Sbjct: 208 QIDPNWTSRSDHSSNIKLRIHSI--QAELRRLLKSKPYEN-----CL-LVLLNVQNAKAW 259
Query: 103 RYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIY----GQPEKIPCVEDFPYGAMNPYGR 158
F+ +CK L+ + + ++
Sbjct: 260 NAFNL---------------SCKILLTTRFKQVTDFLSAATTTHISLDHHSMT------- 297
Query: 159 TKQWCEEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGR 218
E + +LL+Y L P+ +P + +
Sbjct: 298 ---------LT----PDEVKSLLLKY-----------LDCRPQDLP--------REVLTT 325
Query: 219 HP-ELNVYGQDYPTKDGSAVRDYI-HVMDLADGCIAYNLGNGKGISVLE---------MV 267
+P L++ + +DG A D HV C ++VLE +
Sbjct: 326 NPRRLSIIAESI--RDGLATWDNWKHV-----NCDKLTTIIESSLNVLEPAEYRKMFDRL 378
Query: 268 AAFEKASGKKIPIK-----------FCPRRVGDATAVYAATDKAHKELGWKPKYGIEDM 315
+ F ++ IP V + Y+ +K KE I +
Sbjct: 379 SVFPPSA--HIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKES----TISIPSI 431
|
| >1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 278 | Back alignment and structure |
|---|
Score = 42.2 bits (100), Expect = 1e-04
Identities = 19/89 (21%), Positives = 35/89 (39%), Gaps = 6/89 (6%)
Query: 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEF 62
+EK ++TG + IG A+ + G KV + + E ++ E + +
Sbjct: 5 AEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSE--QNVNS 62
Query: 63 HVGDLRNKDDLDKLFSSQKFEAVIHFGAL 91
V D+ D++ S + FG L
Sbjct: 63 VVADVTTDAGQDEILS----TTLGKFGKL 87
|
| >4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A Length = 255 | Back alignment and structure |
|---|
Score = 42.1 bits (100), Expect = 1e-04
Identities = 24/131 (18%), Positives = 47/131 (35%), Gaps = 25/131 (19%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHV 64
K +V GG +G +L++GG +V+L + R+++ GP ++
Sbjct: 9 KKAIVIGGTHGMGLATVRRLVEGGAEVLLTG----RNESNIARIREEFGP----RVHALR 60
Query: 65 GDLRNKDDLDKLFSSQKFEAVIHFGAL------------KAVAE-SVQHPFRYFDNNLIG 111
D+ + +++ L + A GA+ + + S R F N G
Sbjct: 61 SDIADLNEIAVLGA----AAGQTLGAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKG 116
Query: 112 TINLYQAMAKY 122
Q +
Sbjct: 117 AFFTVQRLTPL 127
|
| >3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} Length = 266 | Back alignment and structure |
|---|
Score = 42.1 bits (100), Expect = 1e-04
Identities = 26/88 (29%), Positives = 40/88 (45%), Gaps = 9/88 (10%)
Query: 5 KNILVTGGAGF-IGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFH 63
K +LVT AG IG+ A + L G VV+ D + E D++ DL +E
Sbjct: 23 KVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGR----VEAV 78
Query: 64 VGDLRNKDDLDKLFSSQKFEAVIHFGAL 91
V D+ + + +D L + + V G L
Sbjct: 79 VCDVTSTEAVDALIT----QTVEKAGRL 102
|
| >3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} Length = 262 | Back alignment and structure |
|---|
Score = 42.1 bits (100), Expect = 1e-04
Identities = 27/154 (17%), Positives = 48/154 (31%), Gaps = 28/154 (18%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEA---VDRVKDLAGPELAKKLE 61
K I++ GG +G A +VL + A D ++D +
Sbjct: 12 KVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQ-- 69
Query: 62 FHVGDLRNKDDLDKLFSSQKFEAVIHFGAL------------KAVAESVQHPF-RYFDNN 108
DL N++++ KLF A FG + K + E+ + F N
Sbjct: 70 ---SDLSNEEEVAKLFD----FAEKEFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTIN 122
Query: 109 LIGTINLYQAMAKYNCKK---LVFSSSATIYGQP 139
+ AK+ + ++S
Sbjct: 123 NKVAYFFIKQAAKHMNPNGHIITIATSLLAAYTG 156
|
| >4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} Length = 266 | Back alignment and structure |
|---|
Score = 41.8 bits (99), Expect = 1e-04
Identities = 20/87 (22%), Positives = 30/87 (34%), Gaps = 8/87 (9%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHV 64
K L+TG IG A G ++VL + + A + + G + +
Sbjct: 21 KRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTD----VHTVA 76
Query: 65 GDLRNKDDLDKLFSSQKFEAVIHFGAL 91
DL D +L A FG L
Sbjct: 77 IDLAEPDAPAELAR----RAAEAFGGL 99
|
| >1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2 Length = 335 | Back alignment and structure |
|---|
Score = 42.2 bits (100), Expect = 1e-04
Identities = 24/97 (24%), Positives = 38/97 (39%), Gaps = 27/97 (27%)
Query: 238 RDYIHVM------DLADGCIAYNLGNGKGISVLEMV-AAFEKASGK-KIPIKFCPR--R- 286
DY+ M D AD Y + G +V +M AFE + +K P R
Sbjct: 236 GDYVEAMWLMLQQDKADD---YVVATGVTTTVRDMCQIAFEHVGLDYRDFLKIDPAFFRP 292
Query: 287 ------VGDATAVYAATDKAHKELGWKPKYGIEDMCA 317
+G+ KA + LGWKP+ ++++
Sbjct: 293 AEVDVLLGNPA-------KAQRVLGWKPRTSLDELIR 322
|
| >3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* Length = 263 | Back alignment and structure |
|---|
Score = 41.8 bits (99), Expect = 2e-04
Identities = 23/166 (13%), Positives = 53/166 (31%), Gaps = 32/166 (19%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHV 64
K ++TG + IG A + G +VL+ + + EA +K+ G +
Sbjct: 8 KVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVL----EVA 63
Query: 65 GDLRNKDDLDKLFSSQKFEAVIHFGAL------------KAVAE-SVQHPFRYFDNNLIG 111
D+ + +D + FG + + E + + Y++ ++
Sbjct: 64 VDVATPEGVDAVVE----SVRSSFGGADILVNNAGTGSNETIMEAADEKWQFYWELLVMA 119
Query: 112 TINLYQA----MAKYNCKKLVF-SSSATIYGQPEKIPCVEDFPYGA 152
+ L + M ++ +S + + Y
Sbjct: 120 AVRLARGLVPGMRARGGGAIIHNASICAVQPLWYEP------IYNV 159
|
| >3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} Length = 247 | Back alignment and structure |
|---|
Score = 41.4 bits (98), Expect = 2e-04
Identities = 34/154 (22%), Positives = 49/154 (31%), Gaps = 25/154 (16%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHV 64
+ ILVTG A IG A G VVL+ S+ E D++K P +
Sbjct: 15 RVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQP--QPLIIALN 72
Query: 65 GDLRNKDDLDKLFSSQKFEAVIHFGAL----------KAVAESVQHPFRYFDN----NLI 110
+ +L + FG L Q P F N+
Sbjct: 73 LENATAQQYRELAA----RVEHEFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVN 128
Query: 111 GTINLYQA----MAKYNCKKLVF-SSSATIYGQP 139
T L +A + + + F SSS G+
Sbjct: 129 ATFMLTRALLPLLKRSEDASIAFTSSSVGRKGRA 162
|
| >1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 297 | Back alignment and structure |
|---|
Score = 41.5 bits (98), Expect = 2e-04
Identities = 18/89 (20%), Positives = 38/89 (42%), Gaps = 6/89 (6%)
Query: 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEF 62
S K++++TG + IG A+ + G +V + + + E ++ P A+K+
Sbjct: 25 SGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVP--AEKINA 82
Query: 63 HVGDLRNKDDLDKLFSSQKFEAVIHFGAL 91
V D+ D + + + FG +
Sbjct: 83 VVADVTEASGQDDIIN----TTLAKFGKI 107
|
| >4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} Length = 255 | Back alignment and structure |
|---|
Score = 41.3 bits (98), Expect = 2e-04
Identities = 24/131 (18%), Positives = 43/131 (32%), Gaps = 22/131 (16%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHV 64
K LVTG A +G A L G +V+L D + E+VD +
Sbjct: 10 KTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGY-----DAHGVA 64
Query: 65 GDLRNKDDLDKLFSSQKFEAVIHFGAL---------KAVAESVQHPFRYFDN----NLIG 111
D+ ++ ++ FS + + + V+ + NL
Sbjct: 65 FDVTDELAIEAAFS----KLDAEGIHVDILINNAGIQYRKPMVELELENWQKVIDTNLTS 120
Query: 112 TINLYQAMAKY 122
+ ++ AK
Sbjct: 121 AFLVSRSAAKR 131
|
| >3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi} Length = 118 | Back alignment and structure |
|---|
Score = 39.4 bits (92), Expect = 2e-04
Identities = 26/110 (23%), Positives = 38/110 (34%), Gaps = 25/110 (22%)
Query: 5 KNILVTGGAGFIGTHCALQLLQ-GGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFH 63
NI V G AG IG A L + V + D+ A+ + + +
Sbjct: 6 WNICVVG-AGKIGQMIAALLKTSSNYSVTVADH----DLAALAVLNRM-------GVATK 53
Query: 64 VGDLRNKDDLDKLFSSQKFEAVI-------HFGALKAVAESVQHPFRYFD 106
D +++ L K F+AVI KA + H YFD
Sbjct: 54 QVDAKDEAGLAKAL--GGFDAVISAAPFFLTPIIAKAAKAAGAH---YFD 98
|
| >2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 Length = 263 | Back alignment and structure |
|---|
Score = 41.0 bits (97), Expect = 2e-04
Identities = 22/87 (25%), Positives = 34/87 (39%), Gaps = 12/87 (13%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHV 64
K ILVTG A IG + G +V +D + V L + V
Sbjct: 7 KTILVTGAASGIGRAALDLFAREGASLVAVD---REERLLAEAVAALEA-----EAIAVV 58
Query: 65 GDLRNKDDLDKLFSSQKFEAVIHFGAL 91
D+ + ++ +F+ EA+ FG L
Sbjct: 59 ADVSDPKAVEAVFA----EALEEFGRL 81
|
| >3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} PDB: 3gdf_A Length = 267 | Back alignment and structure |
|---|
Score = 41.0 bits (97), Expect = 3e-04
Identities = 19/89 (21%), Positives = 36/89 (40%), Gaps = 9/89 (10%)
Query: 5 KNILVTGGAGF--IGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEF 62
K ++VTG +G +G A + G V + + A + VK+L K +
Sbjct: 21 KVVVVTGASGPKGMGIEAARGCAEMGAAVAITYA--SRAQGAEENVKELEK-TYGIKAKA 77
Query: 63 HVGDLRNKDDLDKLFSSQKFEAVIHFGAL 91
+ + + + +KL + V FG +
Sbjct: 78 YKCQVDSYESCEKLVK----DVVADFGQI 102
|
| >3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} Length = 264 | Back alignment and structure |
|---|
Score = 41.0 bits (97), Expect = 3e-04
Identities = 23/87 (26%), Positives = 45/87 (51%), Gaps = 8/87 (9%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHV 64
++ L+T G +G +LL G+ V + +S A++ +K+ ++ ++L+F
Sbjct: 8 RHALITAGTKGLGKQVTEKLLAKGYSVTVTY---HSDTTAMETMKETYK-DVEERLQFVQ 63
Query: 65 GDLRNKDDLDKLFSSQKFEAVIHFGAL 91
D+ K+DL K+ EA+ HFG +
Sbjct: 64 ADVTKKEDLHKIVE----EAMSHFGKI 86
|
| >2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* Length = 260 | Back alignment and structure |
|---|
Score = 40.9 bits (97), Expect = 3e-04
Identities = 20/87 (22%), Positives = 32/87 (36%), Gaps = 9/87 (10%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHV 64
K LVT IG A +L Q G VV+ +V V ++ + V
Sbjct: 15 KVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGL-----SVTGTV 69
Query: 65 GDLRNKDDLDKLFSSQKFEAVIHFGAL 91
+ +D ++L + AV G +
Sbjct: 70 CHVGKAEDRERLVA----MAVNLHGGV 92
|
| >3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} Length = 269 | Back alignment and structure |
|---|
Score = 41.0 bits (97), Expect = 3e-04
Identities = 15/91 (16%), Positives = 36/91 (39%), Gaps = 8/91 (8%)
Query: 1 MASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKL 60
M +++ VTGG G +G + +L G V + H+ + V + +
Sbjct: 22 MQAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVS---HSERNDHVSTWLMHER-DAGRDF 77
Query: 61 EFHVGDLRNKDDLDKLFSSQKFEAVIHFGAL 91
+ + D+ + + ++ + + FG +
Sbjct: 78 KAYAVDVADFESCERCAE----KVLADFGKV 104
|
| >4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A Length = 259 | Back alignment and structure |
|---|
Score = 41.0 bits (97), Expect = 3e-04
Identities = 28/131 (21%), Positives = 46/131 (35%), Gaps = 25/131 (19%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHV 64
K+ L+TG A IG A ++ G V + D +A E+
Sbjct: 9 KSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAA--------EIGPAAYAVQ 60
Query: 65 GDLRNKDDLDKLFSSQKFEAVIHFGAL------------KAVAESVQHPF-RYFDNNLIG 111
D+ +D +D + V H G L + E + + + F N+ G
Sbjct: 61 MDVTRQDSIDAAIA----ATVEHAGGLDILVNNAALFDLAPIVEITRESYEKLFAINVAG 116
Query: 112 TINLYQAMAKY 122
T+ QA A+
Sbjct: 117 TLFTLQAAARQ 127
|
| >1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* Length = 241 | Back alignment and structure |
|---|
Score = 40.8 bits (96), Expect = 3e-04
Identities = 23/137 (16%), Positives = 43/137 (31%), Gaps = 30/137 (21%)
Query: 1 MASE---KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELA 57
MA+ + +LV GG G +G+ C + V I D+ E A
Sbjct: 1 MAASGEARRVLVYGGRGALGSRCVQAFRARNWWVASI---------------DVVENEEA 45
Query: 58 KKLEFHVGDLRNKDDLD-------KLFSSQKFEAVIH----FGALKAVAESVQHPF-RYF 105
+ D KL QK +A++ + A ++S+ +
Sbjct: 46 SASVIVKMTDSFTEQADQVTAEVGKLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMW 105
Query: 106 DNNLIGTINLYQAMAKY 122
++ + K+
Sbjct: 106 KQSIWTSTISSHLATKH 122
|
| >2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* Length = 318 | Back alignment and structure |
|---|
Score = 41.0 bits (96), Expect = 3e-04
Identities = 18/89 (20%), Positives = 30/89 (33%), Gaps = 12/89 (13%)
Query: 1 MASE---KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELA 57
M IL+ GG G+IG H L+ G + + + +
Sbjct: 5 MEENGMKSKILIFGGTGYIGNHMVKGSLKLGHPTYV---FTRPNSSKTTLLDEFQ----S 57
Query: 58 KKLEFHVGDLRNKDDLDKLFSSQKFEAVI 86
G+L + L +L +K + VI
Sbjct: 58 LGAIIVKGELDEHEKLVELM--KKVDVVI 84
|
| >2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... Length = 288 | Back alignment and structure |
|---|
Score = 40.7 bits (96), Expect = 4e-04
Identities = 21/90 (23%), Positives = 36/90 (40%), Gaps = 9/90 (10%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDL--AGPELAKKLEF 62
+VTG A IG A++L Q G++VV+ + HNS AV +L A +
Sbjct: 24 PAAVVTGAAKRIGRAIAVKLHQTGYRVVI--HYHNSAEAAVSLADELNKERSNTAVVCQA 81
Query: 63 HVGDLRN-KDDLDKLFSSQKFEAVIHFGAL 91
+ + +++ + FG
Sbjct: 82 DLTNSNVLPASCEEIIN----SCFRAFGRC 107
|
| >3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} Length = 264 | Back alignment and structure |
|---|
Score = 40.2 bits (95), Expect = 4e-04
Identities = 20/132 (15%), Positives = 41/132 (31%), Gaps = 23/132 (17%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHV 64
K ++++G +GT A + + G +VL + + +V D +
Sbjct: 12 KVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGR-----RALSVG 66
Query: 65 GDLRNKDDLDKLFSSQKFEAVIHFGAL-----KAVAESVQHPF---------RYFDNNLI 110
D+ + + L E + +G + A PF + +
Sbjct: 67 TDITDDAQVAHLVD----ETMKAYGRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVF 122
Query: 111 GTINLYQAMAKY 122
G + L Q
Sbjct: 123 GALRLIQGFTPA 134
|
| >1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A* Length = 381 | Back alignment and structure |
|---|
Score = 40.7 bits (96), Expect = 4e-04
Identities = 24/98 (24%), Positives = 38/98 (38%), Gaps = 29/98 (29%)
Query: 238 RDYIHVM------DLADGCIAYNLGNGKGISVLEMV-AAFEKA--SGKKIPIKFCPR--R 286
DY+ M + D Y + +G +V E + +F + K ++ R R
Sbjct: 259 GDYVEAMWLMLQQEKPDD---YVVATEEGHTVEEFLDVSFGYLGLNWKDY-VEIDQRYFR 314
Query: 287 -------VGDATAVYAATDKAHKELGWKPKYGIEDMCA 317
GDA+ KA + LGWKP+ G E +
Sbjct: 315 PAEVDNLQGDAS-------KAKEVLGWKPQVGFEKLVK 345
|
| >2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} Length = 260 | Back alignment and structure |
|---|
Score = 40.2 bits (95), Expect = 5e-04
Identities = 22/87 (25%), Positives = 38/87 (43%), Gaps = 8/87 (9%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHV 64
K +VT G+ +G AL+L + G +++L + A R+ L +++
Sbjct: 8 KLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVS---GAQVDIVA 64
Query: 65 GDLRNKDDLDKLFSSQKFEAVIHFGAL 91
GD+R D+D+L FE G
Sbjct: 65 GDIREPGDIDRL-----FEKARDLGGA 86
|
| >1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A Length = 450 | Back alignment and structure |
|---|
Score = 40.7 bits (94), Expect = 5e-04
Identities = 21/104 (20%), Positives = 36/104 (34%), Gaps = 20/104 (19%)
Query: 1 MASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKL 60
MA+ K++L+ G+GF+ L G KV + S + V +
Sbjct: 1 MAT-KSVLM-LGSGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGV---------QHS 49
Query: 61 EFHVGDLRNKDDLDKLFSSQKFEAVI-------HFGALKAVAES 97
D+ + LD + K + VI H +K+
Sbjct: 50 TPISLDVNDDAALDAEVA--KHDLVISLIPYTFHATVIKSAIRQ 91
|
| >3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} Length = 262 | Back alignment and structure |
|---|
Score = 40.2 bits (95), Expect = 5e-04
Identities = 19/87 (21%), Positives = 32/87 (36%), Gaps = 8/87 (9%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHV 64
++++VTGG IG A + G V + + V + L K+
Sbjct: 11 RSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSG----KVIGVQ 66
Query: 65 GDLRNKDDLDKLFSSQKFEAVIHFGAL 91
D+ ++ D L AV FG +
Sbjct: 67 TDVSDRAQCDALAG----RAVEEFGGI 89
|
| >2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} Length = 250 | Back alignment and structure |
|---|
Score = 40.2 bits (95), Expect = 5e-04
Identities = 15/84 (17%), Positives = 32/84 (38%), Gaps = 8/84 (9%)
Query: 8 LVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDL 67
+VTG + G A + L G +V +D ++ E ++ D+
Sbjct: 6 IVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVL----RVRADV 61
Query: 68 RNKDDLDKLFSSQKFEAVIHFGAL 91
++ D++ + + FGA+
Sbjct: 62 ADEGDVNAAIA----ATMEQFGAI 81
|
| >1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 Length = 279 | Back alignment and structure |
|---|
Score = 40.3 bits (95), Expect = 5e-04
Identities = 37/181 (20%), Positives = 61/181 (33%), Gaps = 47/181 (25%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEA--VDRVKDLAG--PELAKKL 60
+ LVTG +G IG A L+Q G KVV A V +++LA
Sbjct: 33 RLALVTGASGGIGAAVARALVQQGLKVVGC---------ARTVGNIEELAAECKSAGYPG 83
Query: 61 EFHVG--DLRNKDDLDKLFSSQKFEAVIHFGAL-------------KAVAESVQHPFRYF 105
DL N++D+ +FS+ + ++ S F
Sbjct: 84 TLIPYRCDLSNEEDILSMFSA----IRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMF 139
Query: 106 DNNLIGTIN----LYQAMAKYNCKK--LVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRT 159
+ N++ YQ+M + N ++ +S + G P + Y T
Sbjct: 140 NVNVLALSICTREAYQSMKERNVDDGHIININS--MSGH-------RVLPLSVTHFYSAT 190
Query: 160 K 160
K
Sbjct: 191 K 191
|
| >3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum} Length = 516 | Back alignment and structure |
|---|
Score = 40.4 bits (95), Expect = 6e-04
Identities = 33/159 (20%), Positives = 52/159 (32%), Gaps = 46/159 (28%)
Query: 6 NILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVG 65
+ +TG G +G QL GG +V+ L P+ R D P
Sbjct: 149 TVAITGSRGLVGRALTAQLQTGGHEVIQ---LVRKEPKPGKRFWDPLNPAS--------- 196
Query: 66 DLRNKDDLDKLFSSQKFEAVIHF-GA----------LKAVAESVQHPFRYFDNNLIGTIN 114
D LD + ++H G +A+ ES R ++ T
Sbjct: 197 -----DLLD------GADVLVHLAGEPIFGRFNDSHKEAIRES-----R-----VLPTKF 235
Query: 115 LYQAMAKYNCKKLVFSSSAT-IYG-QPEKIPCVEDFPYG 151
L + +A+ + S+SA YG E+ G
Sbjct: 236 LAELVAESTQCTTMISASAVGFYGHDRGDEILTEESESG 274
|
| >1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 Length = 274 | Back alignment and structure |
|---|
Score = 39.9 bits (94), Expect = 6e-04
Identities = 35/134 (26%), Positives = 51/134 (38%), Gaps = 27/134 (20%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEA---VDRVKDLAGPELAKKLE 61
K L TG IG A++L + G VV+ N +S A V +K L +A +
Sbjct: 22 KVALTTGAGRGIGRGIAIELGRRGASVVV--NYGSSSKAAEEVVAELKKLGAQGVAIQ-- 77
Query: 62 FHVGDLRNKDDLDKLFSSQKFEAVIHFGAL------------KAVAESVQHPF-RYFDNN 108
D+ ++ LF +AV HFG L E Q F + F+ N
Sbjct: 78 ---ADISKPSEVVALFD----KAVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLN 130
Query: 109 LIGTINLYQAMAKY 122
G + Q K+
Sbjct: 131 TRGQFFVAQQGLKH 144
|
| >3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3} Length = 286 | Back alignment and structure |
|---|
Score = 39.9 bits (93), Expect = 6e-04
Identities = 48/330 (14%), Positives = 90/330 (27%), Gaps = 89/330 (26%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHV 64
+L G G+ + L G++++ R D A E +
Sbjct: 6 GTLLSFG-HGYTARVLSRALAPQGWRII-----------GTSRNPDQMEAIRASGAEPLL 53
Query: 65 GDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNC 124
+ LD + +I + ++ + A
Sbjct: 54 WPG-EEPSLDGVT-----HLLISTAPDSG------------GDPVLAALGDQIAARAAQF 95
Query: 125 KKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRT-----KQWCEEIAFDVQKADPEWRI 179
+ + + S+ +YG + E P GR +QW +
Sbjct: 96 RWVGYLSTTAVYGDHDGAWVDETTPLTPTAARGRWRVMAEQQWQAVPNLPLH-------- 147
Query: 180 ILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHP-ELNVYGQDYPTKDGSAVR 238
+ R +G G GR P G V
Sbjct: 148 -VFRL--------AGIYGP------------------GRGPFSKLGKGGIRRIIKPGQVF 180
Query: 239 DYIHVMDLADGCIA----------YNLGNGKGISVLEMVAAFEKASGKKIP--IKFCPRR 286
IHV D+A A YN+ + + + +++A + G +P + F
Sbjct: 181 SRIHVEDIAQVLAASMARPDPGAVYNVCDDEPVPPQDVIAYAAELQGLPLPPAVDFDKAD 240
Query: 287 VGDATAVYAAT------DKAHKELGWKPKY 310
+ + + D+ +ELG + KY
Sbjct: 241 LTPMARSFYSENKRVRNDRIKEELGVRLKY 270
|
| >3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} Length = 267 | Back alignment and structure |
|---|
Score = 39.8 bits (94), Expect = 6e-04
Identities = 37/163 (22%), Positives = 57/163 (34%), Gaps = 40/163 (24%)
Query: 1 MASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEA---VDRVKDLAGPELA 57
M + K +VTG + IG A +L GF VV+ N A +++ G L
Sbjct: 24 METNKVAIVTGASRGIGAAIAARLASDGFTVVI--NYAGKAAAAEEVAGKIEAAGGKALT 81
Query: 58 KKLEFHVGDLRNKDDLDKLFSSQKFEAVIHFGAL------------KAVAESVQHPF-RY 104
+ D+ + + +LF+ A FG + +AE+ F R
Sbjct: 82 AQ-----ADVSDPAAVRRLFA----TAEEAFGGVDVLVNNAGIMPLTTIAETGDAVFDRV 132
Query: 105 FDNNLIGTINLYQAMAKY--------NCKKLVFSSSATIYGQP 139
NL GT N + A+ N S+S P
Sbjct: 133 IAVNLKGTFNTLREAAQRLRVGGRIIN-----MSTSQVGLLHP 170
|
| >1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} Length = 244 | Back alignment and structure |
|---|
Score = 39.8 bits (94), Expect = 6e-04
Identities = 18/84 (21%), Positives = 27/84 (32%), Gaps = 15/84 (17%)
Query: 8 LVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDL 67
LVT F G L Q G+ VV D S +A +R + E
Sbjct: 5 LVTHARHFAGPAAVEALTQDGYTVVCHD---ASFADAAERQ--------RFESENPGTIA 53
Query: 68 RNKDDLDKLFSSQKFEAVIHFGAL 91
+ ++L + H A+
Sbjct: 54 LAEQKPERLVD----ATLQHGEAI 73
|
| >3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} Length = 256 | Back alignment and structure |
|---|
Score = 39.8 bits (94), Expect = 7e-04
Identities = 16/87 (18%), Positives = 29/87 (33%), Gaps = 9/87 (10%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHV 64
+VTG A IG A + G VV+ D ++ G K
Sbjct: 13 AVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGG-----KAIGLE 67
Query: 65 GDLRNKDDLDKLFSSQKFEAVIHFGAL 91
++ ++ + + A+ FG +
Sbjct: 68 CNVTDEQHREAVIK----AALDQFGKI 90
|
| >2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* Length = 277 | Back alignment and structure |
|---|
Score = 39.9 bits (94), Expect = 7e-04
Identities = 15/87 (17%), Positives = 35/87 (40%), Gaps = 9/87 (10%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHV 64
+ LVTG IG A +L + G +V + + + +++ + +
Sbjct: 23 EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGV-----EADGRT 77
Query: 65 GDLRNKDDLDKLFSSQKFEAVIHFGAL 91
D+R+ +++ L + V +G +
Sbjct: 78 CDVRSVPEIEALVA----AVVERYGPV 100
|
| >4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} Length = 254 | Back alignment and structure |
|---|
Score = 39.8 bits (94), Expect = 7e-04
Identities = 14/87 (16%), Positives = 33/87 (37%), Gaps = 9/87 (10%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHV 64
K ++VTG IG A + VV ++ L + + + V ++ + ++
Sbjct: 8 KVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGK-----EVLGVK 62
Query: 65 GDLRNKDDLDKLFSSQKFEAVIHFGAL 91
D+ K D+++ + +
Sbjct: 63 ADVSKKKDVEEFVR----RTFETYSRI 85
|
| >3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} Length = 301 | Back alignment and structure |
|---|
Score = 40.0 bits (94), Expect = 7e-04
Identities = 22/87 (25%), Positives = 40/87 (45%), Gaps = 9/87 (10%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHV 64
+ +VTGGA IG A + + G ++VL D ++ +AV+ ++ V
Sbjct: 32 RAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHG-----VV 86
Query: 65 GDLRNKDDLDKLFSSQKFEAVIHFGAL 91
D+R+ D++ +L EA G +
Sbjct: 87 CDVRHLDEMVRLAD----EAFRLLGGV 109
|
| >2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} Length = 1688 | Back alignment and structure |
|---|
Score = 40.6 bits (95), Expect = 7e-04
Identities = 16/31 (51%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Query: 3 SEKNILVTG-GAGFIGTHCALQLLQGGFKVV 32
+K +L+TG G G IG LLQGG KVV
Sbjct: 475 KDKYVLITGAGKGSIGAEVLQGLLQGGAKVV 505
|
| >3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} Length = 267 | Back alignment and structure |
|---|
Score = 39.5 bits (93), Expect = 7e-04
Identities = 33/161 (20%), Positives = 60/161 (37%), Gaps = 25/161 (15%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHV 64
K LVTG IG A L+ G V++ +V E + ++ L+ V
Sbjct: 11 KTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYP---DAILQPVV 67
Query: 65 GDLRNKDDLDKLFSSQKFEAV--------IHFGALKAVAESVQHPFRYFDNNLIGTINLY 116
DL + + +K+ V I F ++ + F+ F+ N++ + L
Sbjct: 68 ADLGTEQGCQDVI--EKYPKVDILINNLGI-FEPVEYFDIPDEDWFKLFEVNIMSGVRLT 124
Query: 117 QA----MAKYNCKKLVF-SSSATIYGQPEKIPCVEDFPYGA 152
++ M + +++F +S A I E Y A
Sbjct: 125 RSYLKKMIERKEGRVIFIASEAAIMPSQEMA------HYSA 159
|
| >1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2 Length = 372 | Back alignment and structure |
|---|
Score = 40.0 bits (94), Expect = 8e-04
Identities = 26/96 (27%), Positives = 39/96 (40%), Gaps = 25/96 (26%)
Query: 237 VRDYIHVMDLADGCIAYNL---GNG---KGISVLEMVAAFEKASGKKIPIKFCPR--R-- 286
VR ++ ++A + L G G KGI V + I PR R
Sbjct: 258 VRQFV---EMAAAQLGIKLRFEGTGVEEKGIVVSVTGHDAPGVKPGDVIIAVDPRYFRPA 314
Query: 287 -----VGDATAVYAATDKAHKELGWKPKYGIEDMCA 317
+GD T KAH++LGWKP+ + +M +
Sbjct: 315 EVETLLGDPT-------KAHEKLGWKPEITLREMVS 343
|
| >3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* Length = 265 | Back alignment and structure |
|---|
Score = 39.5 bits (93), Expect = 8e-04
Identities = 15/84 (17%), Positives = 25/84 (29%), Gaps = 7/84 (8%)
Query: 8 LVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDL 67
+VTGG+ IG LL+ G V + A ++ +L V D+
Sbjct: 12 VVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGA---RLFASVCDV 68
Query: 68 RNKDDLDKLFSSQKFEAVIHFGAL 91
+ + G
Sbjct: 69 LDALQVRAFAE----ACERTLGCA 88
|
| >1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* Length = 255 | Back alignment and structure |
|---|
Score = 39.4 bits (93), Expect = 8e-04
Identities = 19/87 (21%), Positives = 34/87 (39%), Gaps = 9/87 (10%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHV 64
K ++TG IG A+ G VV+ D ++ VD ++ L G +
Sbjct: 12 KCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGG-----QAFACR 66
Query: 65 GDLRNKDDLDKLFSSQKFEAVIHFGAL 91
D+ ++ +L L A+ G +
Sbjct: 67 CDITSEQELSALAD----FAISKLGKV 89
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 335 | |||
| 3enk_A | 341 | UDP-glucose 4-epimerase; seattle structural genomi | 100.0 | |
| 1ek6_A | 348 | UDP-galactose 4-epimerase; short-chain dehydrogena | 100.0 | |
| 2c20_A | 330 | UDP-glucose 4-epimerase; carbohydrate metabolism, | 100.0 | |
| 1udb_A | 338 | Epimerase, UDP-galactose-4-epimerase; isomerase; H | 100.0 | |
| 3ruf_A | 351 | WBGU; rossmann fold, UDP-hexose 4-epimerase, isome | 100.0 | |
| 4egb_A | 346 | DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce | 100.0 | |
| 3m2p_A | 311 | UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J | 100.0 | |
| 1gy8_A | 397 | UDP-galactose 4-epimerase; oxidoreductase; HET: NA | 100.0 | |
| 3ehe_A | 313 | UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, | 100.0 | |
| 3ko8_A | 312 | NAD-dependent epimerase/dehydratase; isomerase, UD | 100.0 | |
| 1sb8_A | 352 | WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN | 100.0 | |
| 3slg_A | 372 | PBGP3 protein; structural genomics, seattle struct | 100.0 | |
| 2pk3_A | 321 | GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor | 100.0 | |
| 2p5y_A | 311 | UDP-glucose 4-epimerase; TTHA0591, structural geno | 100.0 | |
| 2hun_A | 336 | 336AA long hypothetical DTDP-glucose 4,6-dehydrat; | 100.0 | |
| 4b8w_A | 319 | GDP-L-fucose synthase; oxidoreductase; HET: NAP GD | 100.0 | |
| 1oc2_A | 348 | DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos | 100.0 | |
| 1orr_A | 347 | CDP-tyvelose-2-epimerase; rossmann fold, short-cha | 100.0 | |
| 4id9_A | 347 | Short-chain dehydrogenase/reductase; putative dehy | 100.0 | |
| 1r6d_A | 337 | TDP-glucose-4,6-dehydratase; rossmann fold, short- | 100.0 | |
| 3sxp_A | 362 | ADP-L-glycero-D-mannoheptose-6-epimerase; rossman | 100.0 | |
| 1rpn_A | 335 | GDP-mannose 4,6-dehydratase; short-chain dehydroge | 100.0 | |
| 3vps_A | 321 | TUNA, NAD-dependent epimerase/dehydratase; tunicam | 100.0 | |
| 1z45_A | 699 | GAL10 bifunctional protein; epimerase, mutarotase, | 100.0 | |
| 1rkx_A | 357 | CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; | 100.0 | |
| 2q1s_A | 377 | Putative nucleotide sugar epimerase/ dehydratase; | 100.0 | |
| 2c5a_A | 379 | GDP-mannose-3', 5'-epimerase; short chain dehydrat | 100.0 | |
| 2z1m_A | 345 | GDP-D-mannose dehydratase; short-chain dehydrogena | 100.0 | |
| 1t2a_A | 375 | GDP-mannose 4,6 dehydratase; structural genomics c | 100.0 | |
| 2b69_A | 343 | UDP-glucuronate decarboxylase 1; UDP-glucoronic ac | 100.0 | |
| 1kew_A | 361 | RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo | 100.0 | |
| 1e6u_A | 321 | GDP-fucose synthetase; epimerase/reductase, SDR, R | 100.0 | |
| 2bll_A | 345 | Protein YFBG; decarboxylase, short chain dehydroge | 100.0 | |
| 1db3_A | 372 | GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya | 100.0 | |
| 1i24_A | 404 | Sulfolipid biosynthesis protein SQD1; SDR, short-c | 100.0 | |
| 3sc6_A | 287 | DTDP-4-dehydrorhamnose reductase; RFBD, structural | 100.0 | |
| 2yy7_A | 312 | L-threonine dehydrogenase; thermolabIle, flavobact | 100.0 | |
| 1n7h_A | 381 | GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, | 100.0 | |
| 2x4g_A | 342 | Nucleoside-diphosphate-sugar epimerase; isomerase; | 100.0 | |
| 3gpi_A | 286 | NAD-dependent epimerase/dehydratase; structural ge | 100.0 | |
| 2x6t_A | 357 | ADP-L-glycero-D-manno-heptose-6-epimerase; isomera | 100.0 | |
| 1vl0_A | 292 | DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s | 100.0 | |
| 3ajr_A | 317 | NDP-sugar epimerase; L-threonine dehydrogenase, L- | 100.0 | |
| 1n2s_A | 299 | DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold | 100.0 | |
| 1eq2_A | 310 | ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin | 100.0 | |
| 1z7e_A | 660 | Protein aRNA; rossmann fold, OB-like fold, hydrola | 100.0 | |
| 2pzm_A | 330 | Putative nucleotide sugar epimerase/ dehydratase; | 100.0 | |
| 2q1w_A | 333 | Putative nucleotide sugar epimerase/ dehydratase; | 100.0 | |
| 2ydy_A | 315 | Methionine adenosyltransferase 2 subunit beta; oxi | 100.0 | |
| 2hrz_A | 342 | AGR_C_4963P, nucleoside-diphosphate-sugar epimeras | 100.0 | |
| 3ius_A | 286 | Uncharacterized conserved protein; APC63810, silic | 100.0 | |
| 1y1p_A | 342 | ARII, aldehyde reductase II; rossmann fold, short | 100.0 | |
| 2v6g_A | 364 | Progesterone 5-beta-reductase; tyrosine-dependent | 100.0 | |
| 2c29_D | 337 | Dihydroflavonol 4-reductase; flavonoids, short deh | 100.0 | |
| 2rh8_A | 338 | Anthocyanidin reductase; flavonoids, rossmann fold | 100.0 | |
| 2p4h_X | 322 | Vestitone reductase; NADPH-dependent reductase, is | 100.0 | |
| 2ggs_A | 273 | 273AA long hypothetical DTDP-4-dehydrorhamnose red | 100.0 | |
| 4b4o_A | 298 | Epimerase family protein SDR39U1; isomerase; HET: | 100.0 | |
| 3oh8_A | 516 | Nucleoside-diphosphate sugar epimerase (SULA FAMI; | 100.0 | |
| 2gn4_A | 344 | FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann | 100.0 | |
| 3nzo_A | 399 | UDP-N-acetylglucosamine 4,6-dehydratase; structura | 100.0 | |
| 4f6c_A | 427 | AUSA reductase domain protein; thioester reductase | 100.0 | |
| 2jl1_A | 287 | Triphenylmethane reductase; oxidoreductase, biorem | 100.0 | |
| 2zcu_A | 286 | Uncharacterized oxidoreductase YTFG; alpha-beta sa | 100.0 | |
| 4dqv_A | 478 | Probable peptide synthetase NRP (peptide synthase; | 100.0 | |
| 3ay3_A | 267 | NAD-dependent epimerase/dehydratase; glucuronic ac | 100.0 | |
| 4f6l_B | 508 | AUSA reductase domain protein; thioester reductase | 100.0 | |
| 3dhn_A | 227 | NAD-dependent epimerase/dehydratase; reductase, PF | 100.0 | |
| 3rft_A | 267 | Uronate dehydrogenase; apoenzyme, rossmann fold, N | 100.0 | |
| 3i6i_A | 346 | Putative leucoanthocyanidin reductase 1; rossmann | 100.0 | |
| 3st7_A | 369 | Capsular polysaccharide synthesis enzyme CAP5F; ro | 99.98 | |
| 3e48_A | 289 | Putative nucleoside-diphosphate-sugar epimerase; a | 99.97 | |
| 3e8x_A | 236 | Putative NAD-dependent epimerase/dehydratase; stru | 99.97 | |
| 2wm3_A | 299 | NMRA-like family domain containing protein 1; unkn | 99.97 | |
| 3dqp_A | 219 | Oxidoreductase YLBE; alpha-beta protein., structur | 99.97 | |
| 1xq6_A | 253 | Unknown protein; structural genomics, protein stru | 99.96 | |
| 1xgk_A | 352 | Nitrogen metabolite repression regulator NMRA; ros | 99.96 | |
| 1qyd_A | 313 | Pinoresinol-lariciresinol reductase; NADPH-depende | 99.96 | |
| 3ew7_A | 221 | LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend | 99.96 | |
| 3h2s_A | 224 | Putative NADH-flavin reductase; Q03B84, NESG, LCR1 | 99.95 | |
| 2r6j_A | 318 | Eugenol synthase 1; phenylpropene, PIP reductase, | 99.95 | |
| 3m1a_A | 281 | Putative dehydrogenase; short, PSI, MCSG, structur | 99.95 | |
| 2a35_A | 215 | Hypothetical protein PA4017; alpha-beta-alpha sand | 99.95 | |
| 1qyc_A | 308 | Phenylcoumaran benzylic ether reductase PT1; NADPH | 99.95 | |
| 2bka_A | 242 | CC3, TAT-interacting protein TIP30; NADPH, PEG600, | 99.95 | |
| 3c1o_A | 321 | Eugenol synthase; phenylpropene, PIP reductase, sh | 99.95 | |
| 2bgk_A | 278 | Rhizome secoisolariciresinol dehydrogenase; oxidor | 99.95 | |
| 1hdo_A | 206 | Biliverdin IX beta reductase; foetal metabolism, H | 99.94 | |
| 2gas_A | 307 | Isoflavone reductase; NADPH-dependent reductase, o | 99.94 | |
| 1fmc_A | 255 | 7 alpha-hydroxysteroid dehydrogenase; short-chain | 99.94 | |
| 3svt_A | 281 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.94 | |
| 1w6u_A | 302 | 2,4-dienoyl-COA reductase, mitochondrial precursor | 99.94 | |
| 3osu_A | 246 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.94 | |
| 1cyd_A | 244 | Carbonyl reductase; short-chain dehydrogenase, oxi | 99.93 | |
| 4e6p_A | 259 | Probable sorbitol dehydrogenase (L-iditol 2-dehyd; | 99.93 | |
| 2dkn_A | 255 | 3-alpha-hydroxysteroid dehydrogenase; oxidoreducta | 99.93 | |
| 1spx_A | 278 | Short-chain reductase family member (5L265); paral | 99.93 | |
| 3d3w_A | 244 | L-xylulose reductase; uronate cycle, short-chain d | 99.93 | |
| 3ai3_A | 263 | NADPH-sorbose reductase; rossmann-fold, NADPH-depe | 99.93 | |
| 3awd_A | 260 | GOX2181, putative polyol dehydrogenase; oxidoreduc | 99.93 | |
| 1xq1_A | 266 | Putative tropinone reducatse; structural genomics, | 99.93 | |
| 3tzq_B | 271 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.93 | |
| 3un1_A | 260 | Probable oxidoreductase; structural genomics, PSI- | 99.93 | |
| 3v2h_A | 281 | D-beta-hydroxybutyrate dehydrogenase; structural g | 99.93 | |
| 3i4f_A | 264 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 99.92 | |
| 3oid_A | 258 | Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa | 99.92 | |
| 3tpc_A | 257 | Short chain alcohol dehydrogenase-related dehydro; | 99.92 | |
| 2pd6_A | 264 | Estradiol 17-beta-dehydrogenase 8; short-chain deh | 99.92 | |
| 3sju_A | 279 | Keto reductase; short-chain dehydrogenase, oxidore | 99.92 | |
| 2zat_A | 260 | Dehydrogenase/reductase SDR family member 4; alpha | 99.92 | |
| 3gaf_A | 256 | 7-alpha-hydroxysteroid dehydrogenase; seattle stru | 99.92 | |
| 3pk0_A | 262 | Short-chain dehydrogenase/reductase SDR; ssgcid, s | 99.92 | |
| 3s55_A | 281 | Putative short-chain dehydrogenase/reductase; stru | 99.92 | |
| 3rih_A | 293 | Short chain dehydrogenase or reductase; structural | 99.92 | |
| 2pnf_A | 248 | 3-oxoacyl-[acyl-carrier-protein] reductase; short | 99.92 | |
| 3lyl_A | 247 | 3-oxoacyl-(acyl-carrier-protein) reductase; alpha | 99.92 | |
| 2hq1_A | 247 | Glucose/ribitol dehydrogenase; CTH-1438, structura | 99.92 | |
| 3imf_A | 257 | Short chain dehydrogenase; structural genomics, in | 99.92 | |
| 2d1y_A | 256 | Hypothetical protein TT0321; strucrtural genomics, | 99.92 | |
| 2q2v_A | 255 | Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore | 99.92 | |
| 1h5q_A | 265 | NADP-dependent mannitol dehydrogenase; oxidoreduct | 99.92 | |
| 3sx2_A | 278 | Putative 3-ketoacyl-(acyl-carrier-protein) reduct; | 99.92 | |
| 3afn_B | 258 | Carbonyl reductase; alpha/beta/alpha, rossmann-fol | 99.91 | |
| 3o38_A | 266 | Short chain dehydrogenase; tuberculosis, ortholog | 99.91 | |
| 3ucx_A | 264 | Short chain dehydrogenase; ssgcid, seattle structu | 99.91 | |
| 4dqx_A | 277 | Probable oxidoreductase protein; structural genomi | 99.91 | |
| 3ak4_A | 263 | NADH-dependent quinuclidinone reductase; SDR, (R)- | 99.91 | |
| 3tfo_A | 264 | Putative 3-oxoacyl-(acyl-carrier-protein) reducta; | 99.91 | |
| 4fc7_A | 277 | Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman | 99.91 | |
| 3qiv_A | 253 | Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR | 99.91 | |
| 3ijr_A | 291 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.91 | |
| 3f9i_A | 249 | 3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto | 99.91 | |
| 3f1l_A | 252 | Uncharacterized oxidoreductase YCIK; E. coli, NADP | 99.91 | |
| 1mxh_A | 276 | Pteridine reductase 2; SDR topology, protein-subst | 99.91 | |
| 1zk4_A | 251 | R-specific alcohol dehydrogenase; short chain redu | 99.91 | |
| 2wyu_A | 261 | Enoyl-[acyl carrier protein] reductase; oxidoreduc | 99.91 | |
| 1ja9_A | 274 | 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p | 99.91 | |
| 3ftp_A | 270 | 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid | 99.91 | |
| 3gvc_A | 277 | Oxidoreductase, probable short-chain type dehydrog | 99.91 | |
| 1hdc_A | 254 | 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi | 99.91 | |
| 3pgx_A | 280 | Carveol dehydrogenase; structural genomics, seattl | 99.91 | |
| 2cfc_A | 250 | 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor | 99.91 | |
| 4ibo_A | 271 | Gluconate dehydrogenase; enzyme function initiativ | 99.91 | |
| 3op4_A | 248 | 3-oxoacyl-[acyl-carrier protein] reductase; 3-keto | 99.91 | |
| 3pxx_A | 287 | Carveol dehydrogenase; structural genomics, seattl | 99.91 | |
| 2ae2_A | 260 | Protein (tropinone reductase-II); oxidoreductase, | 99.91 | |
| 3qlj_A | 322 | Short chain dehydrogenase; structural genomics, se | 99.91 | |
| 3uf0_A | 273 | Short-chain dehydrogenase/reductase SDR; gluconate | 99.91 | |
| 1nff_A | 260 | Putative oxidoreductase RV2002; directed evolution | 99.91 | |
| 1x1t_A | 260 | D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S | 99.91 | |
| 4eso_A | 255 | Putative oxidoreductase; NADP, structural genomics | 99.91 | |
| 3n74_A | 261 | 3-ketoacyl-(acyl-carrier-protein) reductase; seatt | 99.91 | |
| 1edo_A | 244 | Beta-keto acyl carrier protein reductase; nucleoti | 99.91 | |
| 4egf_A | 266 | L-xylulose reductase; structural genomics, ssgcid, | 99.91 | |
| 4e3z_A | 272 | Putative oxidoreductase protein; PSI-biology, stru | 99.91 | |
| 4dmm_A | 269 | 3-oxoacyl-[acyl-carrier-protein] reductase; rossma | 99.91 | |
| 3qvo_A | 236 | NMRA family protein; structural genomics, PSI-biol | 99.91 | |
| 3ctm_A | 279 | Carbonyl reductase; alcohol dehydrogenase, short-c | 99.91 | |
| 1uay_A | 242 | Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid | 99.91 | |
| 4da9_A | 280 | Short-chain dehydrogenase/reductase; structural ge | 99.91 | |
| 1qsg_A | 265 | Enoyl-[acyl-carrier-protein] reductase; enoyl redu | 99.91 | |
| 3gk3_A | 269 | Acetoacetyl-COA reductase; acetoacetyl-CO reductas | 99.91 | |
| 3gem_A | 260 | Short chain dehydrogenase; structural genomics, AP | 99.91 | |
| 2uvd_A | 246 | 3-oxoacyl-(acyl-carrier-protein) reductase; beta-k | 99.91 | |
| 2c07_A | 285 | 3-oxoacyl-(acyl-carrier protein) reductase; oxidor | 99.91 | |
| 2ph3_A | 245 | 3-oxoacyl-[acyl carrier protein] reductase; TTHA04 | 99.91 | |
| 3r1i_A | 276 | Short-chain type dehydrogenase/reductase; structur | 99.9 | |
| 3t4x_A | 267 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.9 | |
| 3r3s_A | 294 | Oxidoreductase; structural genomics, csgid, center | 99.9 | |
| 3vtz_A | 269 | Glucose 1-dehydrogenase; rossmann fold, oxidoreduc | 99.9 | |
| 2yut_A | 207 | Putative short-chain oxidoreductase; alpha and bet | 99.9 | |
| 3tox_A | 280 | Short chain dehydrogenase; structural genomics, PS | 99.9 | |
| 3d7l_A | 202 | LIN1944 protein; APC89317, structural genomics, PS | 99.9 | |
| 3uxy_A | 266 | Short-chain dehydrogenase/reductase SDR; structura | 99.9 | |
| 4iin_A | 271 | 3-ketoacyl-acyl carrier protein reductase (FABG); | 99.9 | |
| 2dtx_A | 264 | Glucose 1-dehydrogenase related protein; rossmann | 99.9 | |
| 1geg_A | 256 | Acetoin reductase; SDR family, oxidoreductase; HET | 99.9 | |
| 3rd5_A | 291 | Mypaa.01249.C; ssgcid, structural genomics, seattl | 99.9 | |
| 3grp_A | 266 | 3-oxoacyl-(acyl carrierprotein) reductase; structu | 99.9 | |
| 1ae1_A | 273 | Tropinone reductase-I; oxidoreductase, tropane alk | 99.9 | |
| 2fwm_X | 250 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e | 99.9 | |
| 2rhc_B | 277 | Actinorhodin polyketide ketoreductase; oxidoreduct | 99.9 | |
| 1gee_A | 261 | Glucose 1-dehydrogenase; short-chain dehydrogenase | 99.9 | |
| 2wsb_A | 254 | Galactitol dehydrogenase; oxidoreductase, SDR, ros | 99.9 | |
| 3ezl_A | 256 | Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA | 99.9 | |
| 3rkr_A | 262 | Short chain oxidoreductase; rossmann fold; HET: NA | 99.9 | |
| 2bd0_A | 244 | Sepiapterin reductase; oxidoreductase; HET: NAP BI | 99.9 | |
| 2o23_A | 265 | HADH2 protein; HSD17B10, schad, ERAB, type II HADH | 99.9 | |
| 2ew8_A | 249 | (S)-1-phenylethanol dehydrogenase; transferase; 2. | 99.9 | |
| 3r6d_A | 221 | NAD-dependent epimerase/dehydratase; structural ge | 99.9 | |
| 4e4y_A | 244 | Short chain dehydrogenase family protein; structur | 99.9 | |
| 1iy8_A | 267 | Levodione reductase; oxidoreductase; HET: NAD; 1.6 | 99.89 | |
| 1uls_A | 245 | Putative 3-oxoacyl-acyl carrier protein reductase; | 99.89 | |
| 1uzm_A | 247 | 3-oxoacyl-[acyl-carrier protein] reductase; beta-k | 99.89 | |
| 3v8b_A | 283 | Putative dehydrogenase, possibly 3-oxoacyl-[acyl- | 99.89 | |
| 1vl8_A | 267 | Gluconate 5-dehydrogenase; TM0441, structural geno | 99.89 | |
| 1xkq_A | 280 | Short-chain reductase family member (5D234); parra | 99.89 | |
| 3tjr_A | 301 | Short chain dehydrogenase; structural genomics, se | 99.89 | |
| 1yxm_A | 303 | Pecra, peroxisomal trans 2-enoyl COA reductase; pe | 99.89 | |
| 3edm_A | 259 | Short chain dehydrogenase; structural genomics, ox | 99.89 | |
| 3l77_A | 235 | Short-chain alcohol dehydrogenase; oxidoreductase; | 99.89 | |
| 1yo6_A | 250 | Putative carbonyl reductase sniffer; tyrosine-depe | 99.89 | |
| 3k31_A | 296 | Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI | 99.89 | |
| 3cxt_A | 291 | Dehydrogenase with different specificities; rossma | 99.89 | |
| 3uve_A | 286 | Carveol dehydrogenase ((+)-trans-carveol dehydrog; | 99.89 | |
| 3h7a_A | 252 | Short chain dehydrogenase; oxidoreductase, PSI-2, | 99.89 | |
| 2ag5_A | 246 | DHRS6, dehydrogenase/reductase (SDR family) member | 99.89 | |
| 3nrc_A | 280 | Enoyl-[acyl-carrier-protein] reductase (NADH); ros | 99.89 | |
| 2z1n_A | 260 | Dehydrogenase; reductase, SDR, oxidoreductase; 1.8 | 99.89 | |
| 3u9l_A | 324 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.89 | |
| 2p91_A | 285 | Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD | 99.89 | |
| 3asu_A | 248 | Short-chain dehydrogenase/reductase SDR; SDR famil | 99.89 | |
| 3l6e_A | 235 | Oxidoreductase, short-chain dehydrogenase/reducta; | 99.89 | |
| 3u5t_A | 267 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.89 | |
| 4iiu_A | 267 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 99.89 | |
| 2jah_A | 247 | Clavulanic acid dehydrogenase; short-chain dehydro | 99.89 | |
| 1ooe_A | 236 | Dihydropteridine reductase; structural genomics, P | 99.89 | |
| 3tsc_A | 277 | Putative oxidoreductase; structural genomics, seat | 99.89 | |
| 3kzv_A | 254 | Uncharacterized oxidoreductase YIR035C; cytoplasmi | 99.89 | |
| 1xg5_A | 279 | ARPG836; short chain dehydrogenase, human, SGC, st | 99.89 | |
| 2ehd_A | 234 | Oxidoreductase, oxidoreductase, short-chain dehydr | 99.89 | |
| 1sny_A | 267 | Sniffer CG10964-PA; alpha and beta protein, rossma | 99.89 | |
| 3p19_A | 266 | BFPVVD8, putative blue fluorescent protein; rossma | 99.89 | |
| 3ek2_A | 271 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 99.89 | |
| 3oig_A | 266 | Enoyl-[acyl-carrier-protein] reductase [NADH]; fat | 99.89 | |
| 3tl3_A | 257 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.89 | |
| 3grk_A | 293 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 99.89 | |
| 3o26_A | 311 | Salutaridine reductase; short chain dehydrogenase/ | 99.89 | |
| 1yb1_A | 272 | 17-beta-hydroxysteroid dehydrogenase type XI; shor | 99.89 | |
| 1wma_A | 276 | Carbonyl reductase [NADPH] 1; oxidoreductase; HET: | 99.89 | |
| 1hxh_A | 253 | 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b | 99.89 | |
| 3dii_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 99.89 | |
| 3a28_C | 258 | L-2.3-butanediol dehydrogenase; chiral substrate r | 99.89 | |
| 2a4k_A | 263 | 3-oxoacyl-[acyl carrier protein] reductase; reduct | 99.89 | |
| 1xhl_A | 297 | Short-chain dehydrogenase/reductase family member | 99.88 | |
| 1yde_A | 270 | Retinal dehydrogenase/reductase 3; oxidoreductase, | 99.88 | |
| 1fjh_A | 257 | 3alpha-hydroxysteroid dehydrogenase/carbonyl reduc | 99.88 | |
| 1dhr_A | 241 | Dihydropteridine reductase; oxidoreductase(acting | 99.88 | |
| 4imr_A | 275 | 3-oxoacyl-(acyl-carrier-protein) reductase; oxidor | 99.88 | |
| 1zem_A | 262 | Xylitol dehydrogenase; rossmann fold, dinucleotide | 99.88 | |
| 2pd4_A | 275 | Enoyl-[acyl-carrier-protein] reductase [NADH]; ant | 99.88 | |
| 1sby_A | 254 | Alcohol dehydrogenase; ternary complex, NAD, trifl | 99.88 | |
| 3gdg_A | 267 | Probable NADP-dependent mannitol dehydrogenase; ro | 99.88 | |
| 3rwb_A | 247 | TPLDH, pyridoxal 4-dehydrogenase; short chain dehy | 99.88 | |
| 3lf2_A | 265 | Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross | 99.88 | |
| 4fn4_A | 254 | Short chain dehydrogenase; NADH-binding, rossmann | 99.88 | |
| 3icc_A | 255 | Putative 3-oxoacyl-(acyl carrier protein) reducta; | 99.88 | |
| 2gdz_A | 267 | NAD+-dependent 15-hydroxyprostaglandin dehydrogen; | 99.88 | |
| 1g0o_A | 283 | Trihydroxynaphthalene reductase; protein-NADPH-act | 99.88 | |
| 2qhx_A | 328 | Pteridine reductase 1; oxidoreductase, short-chain | 99.88 | |
| 3i1j_A | 247 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.88 | |
| 2b4q_A | 276 | Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier | 99.88 | |
| 2nwq_A | 272 | Probable short-chain dehydrogenase; oxidoreductase | 99.88 | |
| 3is3_A | 270 | 17BETA-hydroxysteroid dehydrogenase; short chain d | 99.88 | |
| 4b79_A | 242 | PA4098, probable short-chain dehydrogenase; oxidor | 99.88 | |
| 1o5i_A | 249 | 3-oxoacyl-(acyl carrier protein) reductase; TM1169 | 99.88 | |
| 4dry_A | 281 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.88 | |
| 4dyv_A | 272 | Short-chain dehydrogenase/reductase SDR; structura | 99.88 | |
| 2x9g_A | 288 | PTR1, pteridine reductase; short chain dehydrogena | 99.88 | |
| 3rku_A | 287 | Oxidoreductase YMR226C; substrate fingerprint, sho | 99.88 | |
| 3t7c_A | 299 | Carveol dehydrogenase; structural genomics, seattl | 99.88 | |
| 3nyw_A | 250 | Putative oxidoreductase; fatty acid synthesis,3-ox | 99.88 | |
| 3guy_A | 230 | Short-chain dehydrogenase/reductase SDR; structura | 99.88 | |
| 3ioy_A | 319 | Short-chain dehydrogenase/reductase SDR; structura | 99.88 | |
| 3v2g_A | 271 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.87 | |
| 3ppi_A | 281 | 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de | 99.87 | |
| 1xu9_A | 286 | Corticosteroid 11-beta-dehydrogenase, isozyme 1; h | 99.87 | |
| 3uce_A | 223 | Dehydrogenase; rossmann fold, oxidoreductase; HET: | 99.87 | |
| 3ged_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 99.87 | |
| 2nm0_A | 253 | Probable 3-oxacyl-(acyl-carrier-protein) reductas; | 99.87 | |
| 3orf_A | 251 | Dihydropteridine reductase; alpha-beta-alpha sandw | 99.87 | |
| 3ksu_A | 262 | 3-oxoacyl-acyl carrier protein reductase; structur | 99.87 | |
| 2qq5_A | 260 | DHRS1, dehydrogenase/reductase SDR family member 1 | 99.87 | |
| 3sc4_A | 285 | Short chain dehydrogenase (A0QTM2 homolog); ssgcid | 99.87 | |
| 2ekp_A | 239 | 2-deoxy-D-gluconate 3-dehydrogenase; structural ge | 99.87 | |
| 3oec_A | 317 | Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; | 99.87 | |
| 1oaa_A | 259 | Sepiapterin reductase; tetrahydrobiopterin, oxidor | 99.87 | |
| 4g81_D | 255 | Putative hexonate dehydrogenase; enzyme function i | 99.86 | |
| 1jtv_A | 327 | 17 beta-hydroxysteroid dehydrogenase type 1; stero | 99.86 | |
| 3zv4_A | 281 | CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox | 99.86 | |
| 4fgs_A | 273 | Probable dehydrogenase protein; PSI-biology, nysgr | 99.86 | |
| 3kvo_A | 346 | Hydroxysteroid dehydrogenase-like protein 2; HSDL2 | 99.86 | |
| 4hp8_A | 247 | 2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi | 99.85 | |
| 3e03_A | 274 | Short chain dehydrogenase; structural genomics, PS | 99.85 | |
| 1e7w_A | 291 | Pteridine reductase; dihydrofolate reductase, shor | 99.85 | |
| 4gkb_A | 258 | 3-oxoacyl-[acyl-carrier protein] reductase; putati | 99.85 | |
| 2h7i_A | 269 | Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi | 99.84 | |
| 1zmt_A | 254 | Haloalcohol dehalogenase HHEC; halohydrin dehaloge | 99.84 | |
| 3e9n_A | 245 | Putative short-chain dehydrogenase/reductase; stru | 99.84 | |
| 4fs3_A | 256 | Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; | 99.84 | |
| 4h15_A | 261 | Short chain alcohol dehydrogenase-related dehydro; | 99.83 | |
| 1y7t_A | 327 | Malate dehydrogenase; NAD-dependent-MDH-NADPH comp | 99.82 | |
| 2fr1_A | 486 | Erythromycin synthase, eryai; short chain dehydrog | 99.82 | |
| 2z5l_A | 511 | Tylkr1, tylactone synthase starter module and modu | 99.81 | |
| 1gz6_A | 319 | Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF | 99.81 | |
| 3mje_A | 496 | AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1. | 99.79 | |
| 1zmo_A | 244 | Halohydrin dehalogenase; haloalcohol dehalogenase, | 99.79 | |
| 3u0b_A | 454 | Oxidoreductase, short chain dehydrogenase/reducta | 99.78 | |
| 1d7o_A | 297 | Enoyl-[acyl-carrier protein] reductase (NADH) PRE; | 99.77 | |
| 3qp9_A | 525 | Type I polyketide synthase pikaii; rossmann fold, | 99.76 | |
| 3oml_A | 613 | GH14720P, peroxisomal multifunctional enzyme type | 99.73 | |
| 2o2s_A | 315 | Enoyl-acyl carrier reductase; enoyl reductase, tri | 99.72 | |
| 3lt0_A | 329 | Enoyl-ACP reductase; triclosan, triclosan variant, | 99.7 | |
| 2ptg_A | 319 | Enoyl-acyl carrier reductase; apicomplexa, enoyl ( | 99.69 | |
| 3zu3_A | 405 | Putative reductase YPO4104/Y4119/YP_4011; oxidored | 99.65 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 99.64 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 99.64 | |
| 3slk_A | 795 | Polyketide synthase extender module 2; rossmann fo | 99.63 | |
| 3s8m_A | 422 | Enoyl-ACP reductase; rossmann fold, oxidoreductase | 99.62 | |
| 2uv8_A | 1887 | Fatty acid synthase subunit alpha (FAS2); fatty ac | 99.62 | |
| 2pff_A | 1688 | Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl | 99.61 | |
| 4eue_A | 418 | Putative reductase CA_C0462; TER, biofuel, synthet | 99.6 | |
| 2uv9_A | 1878 | Fatty acid synthase alpha subunits; fungal, dehydr | 99.58 | |
| 2vz8_A | 2512 | Fatty acid synthase; transferase, phosphopantethei | 99.43 | |
| 3zen_D | 3089 | Fatty acid synthase; transferase, mycolic acid bio | 99.32 | |
| 3ic5_A | 118 | Putative saccharopine dehydrogenase; structural ge | 99.29 | |
| 1b8p_A | 329 | Protein (malate dehydrogenase); oxidoreductase; 1. | 99.24 | |
| 1smk_A | 326 | Malate dehydrogenase, glyoxysomal; tricarboxylic c | 99.06 | |
| 1lu9_A | 287 | Methylene tetrahydromethanopterin dehydrogenase; a | 98.99 | |
| 1hye_A | 313 | L-lactate/malate dehydrogenase; nucleotide binding | 98.95 | |
| 4ggo_A | 401 | Trans-2-enoyl-COA reductase; rossmann fold, oxidor | 98.94 | |
| 1o6z_A | 303 | MDH, malate dehydrogenase; halophilic, ION-binding | 98.86 | |
| 2hmt_A | 144 | YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane | 98.86 | |
| 1ff9_A | 450 | Saccharopine reductase; lysine biosynthesis, alpha | 98.85 | |
| 4ina_A | 405 | Saccharopine dehydrogenase; structural genomics, P | 98.84 | |
| 3llv_A | 141 | Exopolyphosphatase-related protein; NAD(P)-binding | 98.78 | |
| 3abi_A | 365 | Putative uncharacterized protein PH1688; L-lysine | 98.6 | |
| 1lss_A | 140 | TRK system potassium uptake protein TRKA homolog; | 98.59 | |
| 1u7z_A | 226 | Coenzyme A biosynthesis bifunctional protein coabc | 98.57 | |
| 1id1_A | 153 | Putative potassium channel protein; RCK domain, E. | 98.49 | |
| 2gk4_A | 232 | Conserved hypothetical protein; alpha-beta-alpha s | 98.48 | |
| 1mld_A | 314 | Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D | 98.43 | |
| 2g1u_A | 155 | Hypothetical protein TM1088A; structural genomics, | 98.41 | |
| 5mdh_A | 333 | Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH | 98.41 | |
| 2axq_A | 467 | Saccharopine dehydrogenase; rossmann fold variant, | 98.4 | |
| 3fi9_A | 343 | Malate dehydrogenase; structural genomics, oxidore | 98.24 | |
| 3c85_A | 183 | Putative glutathione-regulated potassium-efflux S | 98.14 | |
| 3l4b_C | 218 | TRKA K+ channel protien TM1088B; potassium channel | 98.12 | |
| 3fwz_A | 140 | Inner membrane protein YBAL; TRKA-N domain, E.coli | 98.04 | |
| 1pqw_A | 198 | Polyketide synthase; rossmann fold, dimer, structu | 98.03 | |
| 2z2v_A | 365 | Hypothetical protein PH1688; L-lysine dehydrogenas | 98.03 | |
| 3pqe_A | 326 | L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas | 98.0 | |
| 3tnl_A | 315 | Shikimate dehydrogenase; structural genomics, cent | 97.99 | |
| 1jw9_B | 249 | Molybdopterin biosynthesis MOEB protein; MOEB: mod | 97.89 | |
| 1v3u_A | 333 | Leukotriene B4 12- hydroxydehydrogenase/prostaglan | 97.84 | |
| 2eez_A | 369 | Alanine dehydrogenase; TTHA0216, structural genomi | 97.83 | |
| 1ur5_A | 309 | Malate dehydrogenase; oxidoreductase, tricarboxyli | 97.82 | |
| 2aef_A | 234 | Calcium-gated potassium channel MTHK; rossmann fol | 97.78 | |
| 1dih_A | 273 | Dihydrodipicolinate reductase; oxidoreductase; HET | 97.77 | |
| 2hcy_A | 347 | Alcohol dehydrogenase 1; tetramer of asymmetric di | 97.77 | |
| 3vku_A | 326 | L-LDH, L-lactate dehydrogenase; rossmann fold, NAD | 97.74 | |
| 3gvi_A | 324 | Malate dehydrogenase; NAD, oxidoreductase, tricarb | 97.71 | |
| 1y6j_A | 318 | L-lactate dehydrogenase; southeast collaboratory f | 97.69 | |
| 3d0o_A | 317 | L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly | 97.67 | |
| 3p7m_A | 321 | Malate dehydrogenase; putative dehydrogenase, enzy | 97.67 | |
| 1qor_A | 327 | Quinone oxidoreductase; HET: NAP; 2.20A {Escherich | 97.64 | |
| 1wly_A | 333 | CAAR, 2-haloacrylate reductase; NADPH-dependent ox | 97.63 | |
| 3tl2_A | 315 | Malate dehydrogenase; center for structural genomi | 97.62 | |
| 2j8z_A | 354 | Quinone oxidoreductase; medium-chain dehydrogenase | 97.61 | |
| 3h8v_A | 292 | Ubiquitin-like modifier-activating enzyme 5; rossm | 97.61 | |
| 1nyt_A | 271 | Shikimate 5-dehydrogenase; alpha/beta domains, WID | 97.59 | |
| 2j3h_A | 345 | NADP-dependent oxidoreductase P1; double bond redu | 97.58 | |
| 3t4e_A | 312 | Quinate/shikimate dehydrogenase; structural genomi | 97.57 | |
| 3l9w_A | 413 | Glutathione-regulated potassium-efflux system Pro | 97.57 | |
| 1jay_A | 212 | Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma | 97.57 | |
| 2zb4_A | 357 | Prostaglandin reductase 2; rossmann fold, alternat | 97.55 | |
| 1yb5_A | 351 | Quinone oxidoreductase; medium-chain dehydrogenase | 97.54 | |
| 4b7c_A | 336 | Probable oxidoreductase; NADP cofactor, rossmann f | 97.53 | |
| 1pzg_A | 331 | LDH, lactate dehydrogenase; apicomplexa, APAD, tet | 97.53 | |
| 3jyo_A | 283 | Quinate/shikimate dehydrogenase; enzyme-cofactor c | 97.53 | |
| 1t2d_A | 322 | LDH-P, L-lactate dehydrogenase; ternary complex, o | 97.52 | |
| 1ez4_A | 318 | Lactate dehydrogenase; rossmann fold, oxidoreducta | 97.5 | |
| 2x0j_A | 294 | Malate dehydrogenase; oxidoreductase, hyperthermop | 97.49 | |
| 4eye_A | 342 | Probable oxidoreductase; structural genomics, niai | 97.48 | |
| 2eih_A | 343 | Alcohol dehydrogenase; zinc ION binding protein, s | 97.47 | |
| 4aj2_A | 331 | L-lactate dehydrogenase A chain; oxidoreductase-in | 97.47 | |
| 2ozp_A | 345 | N-acetyl-gamma-glutamyl-phosphate reductase; amino | 97.47 | |
| 1zud_1 | 251 | Adenylyltransferase THIF; thiamin, thiazole, prote | 97.44 | |
| 3gms_A | 340 | Putative NADPH:quinone reductase; structural genom | 97.41 | |
| 1oju_A | 294 | MDH, malate dehydrogenase; hyperthermophilic, oxid | 97.41 | |
| 3qwb_A | 334 | Probable quinone oxidoreductase; rossmann fold, qu | 97.4 | |
| 1nvt_A | 287 | Shikimate 5'-dehydrogenase; structural genomics, P | 97.39 | |
| 2hjs_A | 340 | USG-1 protein homolog; aspartate-semialdehyde dehy | 97.39 | |
| 3gxh_A | 157 | Putative phosphatase (DUF442); YP_001181608.1, str | 97.38 | |
| 3hhp_A | 312 | Malate dehydrogenase; MDH, citric acid cycle, TCA | 97.38 | |
| 3k5i_A | 403 | Phosphoribosyl-aminoimidazole carboxylase; purine | 97.37 | |
| 2nqt_A | 352 | N-acetyl-gamma-glutamyl-phosphate reductase; apopr | 97.36 | |
| 4e12_A | 283 | Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1 | 97.34 | |
| 3jyn_A | 325 | Quinone oxidoreductase; rossmann fold, protein-NAD | 97.31 | |
| 3nep_X | 314 | Malate dehydrogenase; halophIle, molecular adpatat | 97.31 | |
| 3pi7_A | 349 | NADH oxidoreductase; groes-like fold, NAD(P)-bindi | 97.3 | |
| 1pjc_A | 361 | Protein (L-alanine dehydrogenase); oxidoreductase, | 97.3 | |
| 2egg_A | 297 | AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff | 97.3 | |
| 1lnq_A | 336 | MTHK channels, potassium channel related protein; | 97.29 | |
| 4h7p_A | 345 | Malate dehydrogenase; ssgcid, structural G seattle | 97.29 | |
| 2v6b_A | 304 | L-LDH, L-lactate dehydrogenase; oxidoreductase, ra | 97.26 | |
| 3ldh_A | 330 | Lactate dehydrogenase; oxidoreductase, CHOH donor, | 97.25 | |
| 4dup_A | 353 | Quinone oxidoreductase; PSI-biology, structural ge | 97.25 | |
| 1jvb_A | 347 | NAD(H)-dependent alcohol dehydrogenase; archaeon, | 97.24 | |
| 2ewd_A | 317 | Lactate dehydrogenase,; protein-substrate_cofactor | 97.23 | |
| 3orq_A | 377 | N5-carboxyaminoimidazole ribonucleotide synthetas; | 97.22 | |
| 1xyg_A | 359 | Putative N-acetyl-gamma-glutamyl-phosphate reduct; | 97.21 | |
| 4a0s_A | 447 | Octenoyl-COA reductase/carboxylase; oxidoreductase | 97.2 | |
| 2zqz_A | 326 | L-LDH, L-lactate dehydrogenase; oxidoreductase, ro | 97.2 | |
| 1ldn_A | 316 | L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NA | 97.19 | |
| 1iz0_A | 302 | Quinone oxidoreductase; APO-enzyme, riken structur | 97.18 | |
| 2c0c_A | 362 | Zinc binding alcohol dehydrogenase, domain contain | 97.18 | |
| 1p9o_A | 313 | Phosphopantothenoylcysteine synthetase; ligase; 2. | 97.16 | |
| 2vhw_A | 377 | Alanine dehydrogenase; NAD, secreted, oxidoreducta | 97.15 | |
| 4f3y_A | 272 | DHPR, dihydrodipicolinate reductase; structural ge | 97.15 | |
| 4dim_A | 403 | Phosphoribosylglycinamide synthetase; structural g | 97.15 | |
| 3oj0_A | 144 | Glutr, glutamyl-tRNA reductase; structural genomic | 97.12 | |
| 4g65_A | 461 | TRK system potassium uptake protein TRKA; structur | 97.11 | |
| 1yqd_A | 366 | Sinapyl alcohol dehydrogenase; lignin, monolignol, | 97.07 | |
| 2hjr_A | 328 | Malate dehydrogenase; malaria, structural genomics | 97.07 | |
| 4e4t_A | 419 | Phosphoribosylaminoimidazole carboxylase, ATPase; | 97.05 | |
| 3gaz_A | 343 | Alcohol dehydrogenase superfamily protein; oxidore | 97.04 | |
| 2cdc_A | 366 | Glucose dehydrogenase glucose 1-dehydrogenase, DHG | 97.04 | |
| 3fbg_A | 346 | Putative arginate lyase; structural genomics, unkn | 97.03 | |
| 1p77_A | 272 | Shikimate 5-dehydrogenase; NADPH, oxidoreductase; | 97.02 | |
| 2ph5_A | 480 | Homospermidine synthase; alpha-beta protein, struc | 97.0 | |
| 1bg6_A | 359 | N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L | 96.99 | |
| 2vn8_A | 375 | Reticulon-4-interacting protein 1; mitochondrion, | 96.98 | |
| 3rui_A | 340 | Ubiquitin-like modifier-activating enzyme ATG7; au | 96.98 | |
| 2o7s_A | 523 | DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat | 96.97 | |
| 1hyh_A | 309 | L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2 | 96.95 | |
| 3don_A | 277 | Shikimate dehydrogenase; alpha-beta structure, ros | 96.94 | |
| 7mdh_A | 375 | Protein (malate dehydrogenase); chloroplastic mala | 96.91 | |
| 3h5n_A | 353 | MCCB protein; ubiquitin-activating enzyme, microci | 96.89 | |
| 2i6t_A | 303 | Ubiquitin-conjugating enzyme E2-like isoform A; L- | 96.86 | |
| 1guz_A | 310 | Malate dehydrogenase; oxidoreductase, tricarboxyli | 96.86 | |
| 3q2o_A | 389 | Phosphoribosylaminoimidazole carboxylase, ATPase; | 96.85 | |
| 4g65_A | 461 | TRK system potassium uptake protein TRKA; structur | 96.84 | |
| 2xxj_A | 310 | L-LDH, L-lactate dehydrogenase; oxidoreductase, hy | 96.84 | |
| 1xa0_A | 328 | Putative NADPH dependent oxidoreductases; structur | 96.83 | |
| 3o8q_A | 281 | Shikimate 5-dehydrogenase I alpha; structural geno | 96.82 | |
| 2vns_A | 215 | Metalloreductase steap3; metal-binding, transmembr | 96.81 | |
| 1rjw_A | 339 | ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD | 96.81 | |
| 2ep5_A | 350 | 350AA long hypothetical aspartate-semialdehyde deh | 96.81 | |
| 3ijp_A | 288 | DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, | 96.78 | |
| 1u8x_X | 472 | Maltose-6'-phosphate glucosidase; structural genom | 96.77 | |
| 1y8q_A | 346 | Ubiquitin-like 1 activating enzyme E1A; SUMO, hete | 96.76 | |
| 3krt_A | 456 | Crotonyl COA reductase; structural genomics, prote | 96.75 | |
| 3pwz_A | 272 | Shikimate dehydrogenase 3; alpha-beta, oxidoreduct | 96.73 | |
| 4ffl_A | 363 | PYLC; amino acid, biosynthesis of pyrrolysine, iso | 96.73 | |
| 4e21_A | 358 | 6-phosphogluconate dehydrogenase (decarboxylating; | 96.7 | |
| 3dr3_A | 337 | N-acetyl-gamma-glutamyl-phosphate reductase; csgid | 96.69 | |
| 2r00_A | 336 | Aspartate-semialdehyde dehydrogenase; conformation | 96.69 | |
| 1lld_A | 319 | L-lactate dehydrogenase; oxidoreductase(CHOH (D)-N | 96.67 | |
| 3gg2_A | 450 | Sugar dehydrogenase, UDP-glucose/GDP-mannose dehyd | 96.67 | |
| 1a5z_A | 319 | L-lactate dehydrogenase; oxidoreductase, glycolysi | 96.66 | |
| 4gsl_A | 615 | Ubiquitin-like modifier-activating enzyme ATG7; ub | 96.64 | |
| 4dpk_A | 359 | Malonyl-COA/succinyl-COA reductase; dinucleotide b | 96.63 | |
| 4dpl_A | 359 | Malonyl-COA/succinyl-COA reductase; dinucleotide b | 96.63 | |
| 1ys4_A | 354 | Aspartate-semialdehyde dehydrogenase; oxidoreducta | 96.62 | |
| 2ew2_A | 316 | 2-dehydropantoate 2-reductase, putative; alpha-str | 96.61 | |
| 3ax6_A | 380 | Phosphoribosylaminoimidazole carboxylase, ATPase; | 96.6 | |
| 1y8q_B | 640 | Anthracycline-, ubiquitin-like 2 activating enzyme | 96.59 | |
| 1y81_A | 138 | Conserved hypothetical protein; hyperthermophIle, | 96.55 | |
| 1p9l_A | 245 | Dihydrodipicolinate reductase; oxidoreductase, lys | 96.53 | |
| 3pwk_A | 366 | Aspartate-semialdehyde dehydrogenase; NADP binding | 96.53 | |
| 2d8a_A | 348 | PH0655, probable L-threonine 3-dehydrogenase; pyro | 96.52 | |
| 4huj_A | 220 | Uncharacterized protein; PSI-biology, nysgrc, stru | 96.5 | |
| 3vh1_A | 598 | Ubiquitin-like modifier-activating enzyme ATG7; au | 96.49 | |
| 3m6i_A | 363 | L-arabinitol 4-dehydrogenase; medium chain dehydro | 96.48 | |
| 1gu7_A | 364 | Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s | 96.48 | |
| 3qha_A | 296 | Putative oxidoreductase; seattle structural genomi | 96.47 | |
| 1e3j_A | 352 | NADP(H)-dependent ketose reductase; oxidoreductase | 96.45 | |
| 3p2o_A | 285 | Bifunctional protein fold; structural genomics, ce | 96.45 | |
| 3doj_A | 310 | AT3G25530, dehydrogenase-like protein; gamma-hydro | 96.44 | |
| 2cf5_A | 357 | Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign | 96.41 | |
| 3p2y_A | 381 | Alanine dehydrogenase/pyridine nucleotide transhy; | 96.39 | |
| 1gpj_A | 404 | Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro | 96.39 | |
| 1piw_A | 360 | Hypothetical zinc-type alcohol dehydrogenase- like | 96.39 | |
| 1h2b_A | 359 | Alcohol dehydrogenase; oxidoreductase, archaea, hy | 96.38 | |
| 3lk7_A | 451 | UDP-N-acetylmuramoylalanine--D-glutamate ligase; a | 96.38 | |
| 2d4a_B | 308 | Malate dehydrogenase; archaea, hyperthermophIle, o | 96.37 | |
| 3cky_A | 301 | 2-hydroxymethyl glutarate dehydrogenase; rossmann | 96.37 | |
| 3d4o_A | 293 | Dipicolinate synthase subunit A; NP_243269.1, stru | 96.36 | |
| 1uuf_A | 369 | YAHK, zinc-type alcohol dehydrogenase-like protein | 96.35 | |
| 3uog_A | 363 | Alcohol dehydrogenase; structural genomics, protei | 96.34 | |
| 1kjq_A | 391 | GART 2, phosphoribosylglycinamide formyltransferas | 96.34 | |
| 2rir_A | 300 | Dipicolinate synthase, A chain; structural genomic | 96.31 | |
| 4dio_A | 405 | NAD(P) transhydrogenase subunit alpha PART 1; stru | 96.31 | |
| 1l7d_A | 384 | Nicotinamide nucleotide transhydrogenase, subunit | 96.31 | |
| 3g79_A | 478 | NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; | 96.28 | |
| 3tqh_A | 321 | Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella | 96.28 | |
| 1s6y_A | 450 | 6-phospho-beta-glucosidase; hydrolase, structural | 96.27 | |
| 3two_A | 348 | Mannitol dehydrogenase; cinnamyl-alcohol dehydroge | 96.26 | |
| 1edz_A | 320 | 5,10-methylenetetrahydrofolate dehydrogenase; nucl | 96.21 | |
| 1zsy_A | 357 | Mitochondrial 2-enoyl thioester reductase; medium- | 96.21 | |
| 2dq4_A | 343 | L-threonine 3-dehydrogenase; NAD-dependent, oxidor | 96.2 | |
| 3gqv_A | 371 | Enoyl reductase; medium-chain reductase (MDR super | 96.2 | |
| 1obb_A | 480 | Maltase, alpha-glucosidase; glycosidase, sulfinic | 96.2 | |
| 2h78_A | 302 | Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601 | 96.2 | |
| 3l07_A | 285 | Bifunctional protein fold; structural genomics, ID | 96.2 | |
| 2dwc_A | 433 | PH0318, 433AA long hypothetical phosphoribosylglyc | 96.19 | |
| 3ouz_A | 446 | Biotin carboxylase; structural genomics, center fo | 96.18 | |
| 4a26_A | 300 | Putative C-1-tetrahydrofolate synthase, cytoplasm; | 96.17 | |
| 3c24_A | 286 | Putative oxidoreductase; YP_511008.1, structural g | 96.17 |
| >3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-54 Score=389.78 Aligned_cols=326 Identities=53% Similarity=0.945 Sum_probs=291.6
Q ss_pred CCCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcC
Q 019795 1 MASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQ 80 (335)
Q Consensus 1 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~ 80 (335)
|.++|+|||||||||||++++++|+++|++|++++|+..........+....+ .++.++.+|++|.+++.++++..
T Consensus 2 M~~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~----~~~~~~~~Dl~d~~~~~~~~~~~ 77 (341)
T 3enk_A 2 MSTKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITG----KTPAFHETDVSDERALARIFDAH 77 (341)
T ss_dssp CCSSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHS----CCCEEECCCTTCHHHHHHHHHHS
T ss_pred CCCCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcC----CCceEEEeecCCHHHHHHHHhcc
Confidence 56678999999999999999999999999999999987776655555544322 57889999999999999999877
Q ss_pred CCCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccCCCCCCCccCCCCCCCCChhHHhH
Q 019795 81 KFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTK 160 (335)
Q Consensus 81 ~~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~Y~~sK 160 (335)
++|+|||+|+..........+...+++|+.++.+++++|++.++++||++||.++||.....+++|+.+..|.+.|+.+|
T Consensus 78 ~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK 157 (341)
T 3enk_A 78 PITAAIHFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRERAVKRIVFSSSATVYGVPERSPIDETFPLSATNPYGQTK 157 (341)
T ss_dssp CCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGBCSCSSSSBCTTSCCBCSSHHHHHH
T ss_pred CCcEEEECccccccCccccChHHHHHHHHHHHHHHHHHHHhCCCCEEEEEecceEecCCCCCCCCCCCCCCCCChhHHHH
Confidence 89999999998766666777889999999999999999999988999999999999988888999999999999999999
Q ss_pred HHHHHHHHHHHhhCCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHHHhCCCCceeEecccCCCCCCceeeee
Q 019795 161 QWCEEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAVRDY 240 (335)
Q Consensus 161 ~~~E~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 240 (335)
.++|++++.++.++++++++++||++|||+++...+|+........+++++.....+..+.+.++|.....+++.+.++|
T Consensus 158 ~~~e~~~~~~~~~~~~~~~~~lRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~ 237 (341)
T 3enk_A 158 LMAEQILRDVEAADPSWRVATLRYFNPVGAHESGLIGEDPAGIPNNLMPYVAQVAVGKLEKLRVFGSDYPTPDGTGVRDY 237 (341)
T ss_dssp HHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCSSHHHHHHHHHHTSSSCEEEECSCSSSTTSSCEECE
T ss_pred HHHHHHHHHHhhcCCCceEEEEeeccccCCccccccCCCcccCccchHHHHHHHHhcCCCceEEeCCccCCCCCCeeEee
Confidence 99999999999888569999999999999998888888777767888898888887765558888877777789999999
Q ss_pred eeHhhhhc-------------cCceEEecCCccccHHHHHHHHHHHhCCCCCceeCCCCCCccceeeccHHHHHHhcCCc
Q 019795 241 IHVMDLAD-------------GCIAYNLGNGKGISVLEMVAAFEKASGKKIPIKFCPRRVGDATAVYAATDKAHKELGWK 307 (335)
Q Consensus 241 v~~~D~~~-------------~~~~~nv~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~d~~k~~~~Lg~~ 307 (335)
+|++|+++ .+++||+++++.+|+.|+++.+.+.+|.+.++...+..+.+.....+|++|+++.|||+
T Consensus 238 i~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~ 317 (341)
T 3enk_A 238 IHVVDLARGHIAALDALERRDASLTVNLGTGRGYSVLEVVRAFEKASGRAVPYELVARRPGDVAECYANPAAAAETIGWK 317 (341)
T ss_dssp EEHHHHHHHHHHHHHHHHHHTSCEEEEESCSCCEEHHHHHHHHHHHHCSCCCEEEECCCTTCCSEECBCCHHHHHHHCCC
T ss_pred EEHHHHHHHHHHHHHhhhcCCcceEEEeCCCCceeHHHHHHHHHHHhCCCcceeeCCCCCCCccccccCHHHHHHHcCCC
Confidence 99999987 37899999999999999999999999999888888877778888999999999999999
Q ss_pred cccCHHHHHHHHHHHHhcCCCCc
Q 019795 308 PKYGIEDMCAHQWNWAKNNPMGY 330 (335)
Q Consensus 308 p~~~~~~~~~~~~~~~~~~~~~~ 330 (335)
|+++++++|+++++|+++++..|
T Consensus 318 p~~~l~~~l~~~~~~~~~~~~~~ 340 (341)
T 3enk_A 318 AERDLERMCADHWRWQENNPRGF 340 (341)
T ss_dssp CCCCHHHHHHHHHHHHHHSTTSC
T ss_pred CCCCHHHHHHHHHHHHHhcCccC
Confidence 99999999999999999998876
|
| >1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-50 Score=364.45 Aligned_cols=325 Identities=54% Similarity=0.957 Sum_probs=271.7
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCC------chhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHH
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNS------VPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLF 77 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~------~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~ 77 (335)
+|+|||||||||||++|+++|+++|++|++++|.... .....+.+....+ .++.++.+|++|.+++.+++
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~----~~~~~~~~D~~~~~~~~~~~ 77 (348)
T 1ek6_A 2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTG----RSVEFEEMDILDQGALQRLF 77 (348)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHT----CCCEEEECCTTCHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhccC----CceEEEECCCCCHHHHHHHH
Confidence 6899999999999999999999999999999986543 2333333332111 46889999999999999999
Q ss_pred hcCCCCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccCCCCCCCccCCCCCCC-CChh
Q 019795 78 SSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQPEKIPCVEDFPYGA-MNPY 156 (335)
Q Consensus 78 ~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~-~~~Y 156 (335)
+..++|+|||+|+......+.++++..+++|+.++.+++++|++.++++||++||.++||.....+++|+.+..| .+.|
T Consensus 78 ~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~~~E~~~~~p~~~~Y 157 (348)
T 1ek6_A 78 KKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPY 157 (348)
T ss_dssp HHCCEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSSHH
T ss_pred HhcCCCEEEECCCCcCccchhhchHHHHHHHHHHHHHHHHHHHHhCCCEEEEECcHHHhCCCCCCCcCCCCCCCCCCCch
Confidence 866799999999986555556778899999999999999999998889999999999999877788999998888 8899
Q ss_pred HHhHHHHHHHHHHHHhhCCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHHHhCCCCceeEecccCCCCCCce
Q 019795 157 GRTKQWCEEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSA 236 (335)
Q Consensus 157 ~~sK~~~E~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 236 (335)
+.+|..+|.+++.++.+.++++++++||+++||+++.+.+|+........+++.+...+.+....+.++|+..+.+++.+
T Consensus 158 ~~sK~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~ 237 (348)
T 1ek6_A 158 GKSKFFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTG 237 (348)
T ss_dssp HHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSC
T ss_pred HHHHHHHHHHHHHHHhcCCCcceEEEeeccccCCCcccccCcCcccchhhHHHHHHHHHHhcCCCeEEeCCcccCCCCce
Confidence 99999999999998876335999999999999998877777655443456778777777643333778876555557889
Q ss_pred eeeeeeHhhhhc------------cC-ceEEecCCccccHHHHHHHHHHHhCCCCCceeCCCCCCccceeeccHHHHHHh
Q 019795 237 VRDYIHVMDLAD------------GC-IAYNLGNGKGISVLEMVAAFEKASGKKIPIKFCPRRVGDATAVYAATDKAHKE 303 (335)
Q Consensus 237 ~~~~v~~~D~~~------------~~-~~~nv~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~d~~k~~~~ 303 (335)
.++|+|++|+++ .+ ++||+++++.+|+.|+++.+.+.+|.+.++...+....+.....+|++|+++.
T Consensus 238 ~~~~i~v~Dva~a~~~~~~~~~~~~g~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~d~~k~~~~ 317 (348)
T 1ek6_A 238 VRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGKKIPYKVVARREGDVAACYANPSLAQEE 317 (348)
T ss_dssp EECEEEHHHHHHHHHHHHHHHTTTCCEEEEEECCSCCEEHHHHHHHHHHHHCSCCCEEEECCCTTCCSEECBCCHHHHHT
T ss_pred EEeeEEHHHHHHHHHHHHhcccccCCceEEEeCCCCCccHHHHHHHHHHHhCCCCceeeCCCCCccchhhccCHHHHHHh
Confidence 999999999987 12 79999999999999999999999998877766666666667788999999999
Q ss_pred cCCccccCHHHHHHHHHHHHhcCCCCccc
Q 019795 304 LGWKPKYGIEDMCAHQWNWAKNNPMGYQT 332 (335)
Q Consensus 304 Lg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 332 (335)
|||+|+++++++|+++++|++++...++.
T Consensus 318 lG~~p~~~l~~~l~~~~~w~~~~~~~~~~ 346 (348)
T 1ek6_A 318 LGWTAALGLDRMCEDLWRWQKQNPSGFGT 346 (348)
T ss_dssp TCCCCCCCHHHHHHHHHHHHHHCTTCSCC
T ss_pred cCCCCCCCHHHHHHHHHHHHHhccccccc
Confidence 99999999999999999999998776654
|
| >2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.3e-50 Score=360.33 Aligned_cols=316 Identities=38% Similarity=0.724 Sum_probs=268.3
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCCC
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKFE 83 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~d 83 (335)
||+|||||||||||++|+++|+++|++|++++|....... .+ ..++.++.+|++|.+++.++++..++|
T Consensus 1 M~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---~~--------~~~~~~~~~D~~~~~~~~~~~~~~~~d 69 (330)
T 2c20_A 1 MNSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHED---AI--------TEGAKFYNGDLRDKAFLRDVFTQENIE 69 (330)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGG---GS--------CTTSEEEECCTTCHHHHHHHHHHSCEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCchh---hc--------CCCcEEEECCCCCHHHHHHHHhhcCCC
Confidence 4699999999999999999999999999999987554321 11 136889999999999999999866799
Q ss_pred EEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccCCCCCCCccCCCCCCCCChhHHhHHHH
Q 019795 84 AVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQWC 163 (335)
Q Consensus 84 ~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~Y~~sK~~~ 163 (335)
+|||+|+......+..+++..+++|+.++.+++++|++.+++++|++||.++||.....+++|+++..|.+.|+.+|..+
T Consensus 70 ~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~ 149 (330)
T 2c20_A 70 AVMHFAADSLVGVSMEKPLQYYNNNVYGALCLLEVMDEFKVDKFIFSSTAATYGEVDVDLITEETMTNPTNTYGETKLAI 149 (330)
T ss_dssp EEEECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGGCSCSSSSBCTTSCCCCSSHHHHHHHHH
T ss_pred EEEECCcccCccccccCHHHHHHHHhHHHHHHHHHHHHcCCCEEEEeCCceeeCCCCCCCCCcCCCCCCCChHHHHHHHH
Confidence 99999998655445667889999999999999999999998999999999999987777899999999999999999999
Q ss_pred HHHHHHHHhhCCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHHHhCCCCceeEecccCCCCCCceeeeeeeH
Q 019795 164 EEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAVRDYIHV 243 (335)
Q Consensus 164 E~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~v~~ 243 (335)
|++++.++.++ +++++++||+++||+.+.+.+|+... ....+++.+.....+..+.+.++|+..+.+++.+.++|+|+
T Consensus 150 e~~~~~~~~~~-~~~~~ilrp~~v~G~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~v~v 227 (330)
T 2c20_A 150 EKMLHWYSQAS-NLRYKIFRYFNVAGATPNGIIGEDHR-PETHLIPLVLQVALGQREKIMMFGDDYNTPDGTCIRDYIHV 227 (330)
T ss_dssp HHHHHHHHHTS-SCEEEEEECSEEECCCTTCSSCCCCS-SCCSHHHHHHHHHTTSSSCEEEECSCCSSSSSSCEECEEEH
T ss_pred HHHHHHHHHHh-CCcEEEEecCcccCCCCcCccccccc-cccchHHHHHHHHhhcCCCeEEeCCccccCCCceeEeeEeH
Confidence 99999998887 99999999999999987766665422 23457777777666554447788765555578889999999
Q ss_pred hhhhc-------------cCceEEecCCccccHHHHHHHHHHHhCCCCCceeCCCCCCccceeeccHHHHHHhcCCcccc
Q 019795 244 MDLAD-------------GCIAYNLGNGKGISVLEMVAAFEKASGKKIPIKFCPRRVGDATAVYAATDKAHKELGWKPKY 310 (335)
Q Consensus 244 ~D~~~-------------~~~~~nv~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~d~~k~~~~Lg~~p~~ 310 (335)
+|+++ .+++||+++++.+|+.|+++.+.+.+|.+.++...+....+.....+|++|+++.|||+|++
T Consensus 228 ~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~ 307 (330)
T 2c20_A 228 EDLVAAHFLGLKDLQNGGESDFYNLGNGNGFSVKEIVDAVREVTNHEIPAEVAPRRAGDPARLVASSQKAKEKLGWDPRY 307 (330)
T ss_dssp HHHHHHHHHHHHHHHTTCCCEEEECCCTTCBCHHHHHHHHHHHTTSCCCEEEECCCSSCCSEECBCCHHHHHHHCCCCSC
T ss_pred HHHHHHHHHHHhccccCCCCCeEEeCCCCCccHHHHHHHHHHHhCCCCceeeCCCCCCcccccccCHHHHHHHhCCCCcc
Confidence 99987 15799999999999999999999999988877766665556677889999999999999999
Q ss_pred -CHHHHHHHHHHHHhcCCCCccc
Q 019795 311 -GIEDMCAHQWNWAKNNPMGYQT 332 (335)
Q Consensus 311 -~~~~~~~~~~~~~~~~~~~~~~ 332 (335)
+++++|+++++|++++...+.|
T Consensus 308 ~~l~~~l~~~~~~~~~~~~~~~~ 330 (330)
T 2c20_A 308 VNVKTIIEHAWNWHQKQPNGYEK 330 (330)
T ss_dssp CCHHHHHHHHHHHHHHCSSCCCC
T ss_pred CCHHHHHHHHHHHHHHhhhccCC
Confidence 9999999999999998876643
|
| >1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-49 Score=360.63 Aligned_cols=322 Identities=52% Similarity=0.938 Sum_probs=267.7
Q ss_pred CeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCCCE
Q 019795 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKFEA 84 (335)
Q Consensus 5 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~d~ 84 (335)
|+|||||||||||++++++|+++|++|++++|...........+....+ .++.++.+|++|++++.++++..++|+
T Consensus 1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~Dl~~~~~~~~~~~~~~~D~ 76 (338)
T 1udb_A 1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGG----KHPTFVEGDIRNEALMTEILHDHAIDT 76 (338)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHT----SCCEEEECCTTCHHHHHHHHHHTTCSE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHHHHHHhhcC----CcceEEEccCCCHHHHHHHhhccCCCE
Confidence 4899999999999999999999999999998754433322333322111 467889999999999999998657999
Q ss_pred EEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccCCCCCCCccCCCCCCC-CChhHHhHHHH
Q 019795 85 VIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQPEKIPCVEDFPYGA-MNPYGRTKQWC 163 (335)
Q Consensus 85 vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~-~~~Y~~sK~~~ 163 (335)
|||+|+........+++...+++|+.++.+++++|++.++++||++||.++||.....+++|+.+..| .+.|+.+|.++
T Consensus 77 vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~~~e~~~~~~~~~~Y~~sK~~~ 156 (338)
T 1udb_A 77 VIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSATVYGDNPKIPYVESFPTGTPQSPYGKSKLMV 156 (338)
T ss_dssp EEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCCSSSBCTTSCCCCCSSHHHHHHHHH
T ss_pred EEECCccCccccchhcHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccHHHhCCCCCCCcCcccCCCCCCChHHHHHHHH
Confidence 99999986554455677889999999999999999998889999999999999877778888888755 78999999999
Q ss_pred HHHHHHHHhhCCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHHHhCCCCceeEecccCCCCCCceeeeeeeH
Q 019795 164 EEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAVRDYIHV 243 (335)
Q Consensus 164 E~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~v~~ 243 (335)
|++++.++.++++++++++||+++||+++...+|+........+.+.+.....+..+.+.++|...+.+++.+.++|+|+
T Consensus 157 e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v 236 (338)
T 1udb_A 157 EQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHV 236 (338)
T ss_dssp HHHHHHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCEECEEEH
T ss_pred HHHHHHHHHhcCCCceEEEeeceecCCCcccccccccccchhhHHHHHHHHHHhcCCCcEEecCcccCCCCceeeeeEEH
Confidence 99999988776689999999999999988878887655445667887777776544447777765555578889999999
Q ss_pred hhhhc--------c-----CceEEecCCccccHHHHHHHHHHHhCCCCCceeCCCCCCccceeeccHHHHHHhcCCcccc
Q 019795 244 MDLAD--------G-----CIAYNLGNGKGISVLEMVAAFEKASGKKIPIKFCPRRVGDATAVYAATDKAHKELGWKPKY 310 (335)
Q Consensus 244 ~D~~~--------~-----~~~~nv~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~d~~k~~~~Lg~~p~~ 310 (335)
+|+++ . +++||+++++.+|+.|+++.+.+.+|.+.++...+....+.....+|++|+++.|||+|++
T Consensus 237 ~Dva~a~~~~l~~~~~~~~~~~yni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~ 316 (338)
T 1udb_A 237 MDLADGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKACGKPVNYHFAPRREGDLPAYWADASKADRELNWRVTR 316 (338)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEEEESCSCCEEHHHHHHHHHHHHTSCCCEEEECCCTTCCSBCCBCCHHHHHHHCCCCCC
T ss_pred HHHHHHHHHHHhhhhccCCCcEEEecCCCceeHHHHHHHHHHHhCCCCcceeCCCCCCchhhhhcCHHHHHHHcCCCcCC
Confidence 99986 1 2689999999999999999999999988777666666666667889999999999999999
Q ss_pred CHHHHHHHHHHHHhcCCCCc
Q 019795 311 GIEDMCAHQWNWAKNNPMGY 330 (335)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~ 330 (335)
+++++|+++++|++++...+
T Consensus 317 ~l~~~l~~~~~w~~~~~~~~ 336 (338)
T 1udb_A 317 TLDEMAQDTWHWQSRHPQGY 336 (338)
T ss_dssp CHHHHHHHHHHHHHHCTTCS
T ss_pred CHHHHHHHHHHHHHhccccc
Confidence 99999999999999987654
|
| >3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-50 Score=367.80 Aligned_cols=309 Identities=25% Similarity=0.365 Sum_probs=258.6
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCC
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQK 81 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~ 81 (335)
+++|+|||||||||||++|+++|+++|++|++++|+..........+..........++.++.+|++|.+++.++++ +
T Consensus 23 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~ 100 (351)
T 3ruf_A 23 FSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMK--G 100 (351)
T ss_dssp HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTT--T
T ss_pred CCCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhc--C
Confidence 46789999999999999999999999999999999877665555544432211111478999999999999999998 8
Q ss_pred CCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccCCCCCCCccCCCCCCCCChhHHhHH
Q 019795 82 FEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQ 161 (335)
Q Consensus 82 ~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~Y~~sK~ 161 (335)
+|+|||+|+......+..++...+++|+.++.+++++|++.++++|||+||.++||.....+++|+.+..|.+.|+.+|.
T Consensus 101 ~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~ 180 (351)
T 3ruf_A 101 VDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQVQSFTYAASSSTYGDHPALPKVEENIGNPLSPYAVTKY 180 (351)
T ss_dssp CSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSSBCTTCCCCCCSHHHHHHH
T ss_pred CCEEEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEecHHhcCCCCCCCCccCCCCCCCChhHHHHH
Confidence 99999999987666677788899999999999999999999999999999999999888889999999999999999999
Q ss_pred HHHHHHHHHHhhCCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHH-HHHHHhCCCCceeEecccCCCCCCceeeee
Q 019795 162 WCEEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPY-IQQVAVGRHPELNVYGQDYPTKDGSAVRDY 240 (335)
Q Consensus 162 ~~E~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 240 (335)
.+|++++.+.++. +++++++||++|||+.... ......+++. +..++.+. + +.++| ++.+.++|
T Consensus 181 ~~E~~~~~~~~~~-g~~~~ilRp~~v~G~~~~~------~~~~~~~~~~~~~~~~~~~-~-~~~~g------~g~~~~~~ 245 (351)
T 3ruf_A 181 VNEIYAQVYARTY-GFKTIGLRYFNVFGRRQDP------NGAYAAVIPKWTAAMLKGD-D-VYING------DGETSRDF 245 (351)
T ss_dssp HHHHHHHHHHHHH-CCCCEEEEECSEESTTCCC------CSTTCCHHHHHHHHHHHTC-C-CEEES------SSCCEECC
T ss_pred HHHHHHHHHHHHh-CCCEEEEeeCceeCcCCCC------CcchhhHHHHHHHHHHcCC-C-cEEeC------CCCeEEee
Confidence 9999999988887 9999999999999995431 1112235554 44455554 4 57777 78899999
Q ss_pred eeHhhhhc------------cCceEEecCCccccHHHHHHHHHHHhCCC-----CCceeCCCCCCccceeeccHHHHHHh
Q 019795 241 IHVMDLAD------------GCIAYNLGNGKGISVLEMVAAFEKASGKK-----IPIKFCPRRVGDATAVYAATDKAHKE 303 (335)
Q Consensus 241 v~~~D~~~------------~~~~~nv~~~~~~s~~el~~~i~~~~g~~-----~~~~~~~~~~~~~~~~~~d~~k~~~~ 303 (335)
+|++|+++ .+++||+++++.+|+.|+++.+.+.+|.+ .+....+....+.....+|++|+++.
T Consensus 246 i~v~Dva~a~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~ 325 (351)
T 3ruf_A 246 CYIDNVIQMNILSALAKDSAKDNIYNVAVGDRTTLNELSGYIYDELNLIHHIDKLSIKYREFRSGDVRHSQADVTKAIDL 325 (351)
T ss_dssp EEHHHHHHHHHHHHTCCGGGCSEEEEESCSCCEEHHHHHHHHHHHHHTTCCC-----EEECCCTTCCSBCCBCCHHHHHH
T ss_pred EEHHHHHHHHHHHHhhccccCCCEEEeCCCCcccHHHHHHHHHHHhCcccccccccccccCCCCCccceeeeCHHHHHHH
Confidence 99999987 37899999999999999999999999973 23333344455667888999999999
Q ss_pred cCCccccCHHHHHHHHHHHHhcCC
Q 019795 304 LGWKPKYGIEDMCAHQWNWAKNNP 327 (335)
Q Consensus 304 Lg~~p~~~~~~~~~~~~~~~~~~~ 327 (335)
|||+|+++++++|+++++|++++.
T Consensus 326 lG~~p~~~~~~~l~~~~~~~~~~~ 349 (351)
T 3ruf_A 326 LKYRPNIKIREGLRLSMPWYVRFL 349 (351)
T ss_dssp HCCCCCCCHHHHHHHHHHHHHHHH
T ss_pred hCCCCCCCHHHHHHHHHHHHHHhh
Confidence 999999999999999999998753
|
| >4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-49 Score=362.11 Aligned_cols=309 Identities=29% Similarity=0.497 Sum_probs=249.3
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCC--CeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGG--FKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~ 79 (335)
+++|+|||||||||||++|+++|+++| ++|++++|...... ...+.... ..+++.++.+|++|.+.+.++++.
T Consensus 22 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~--~~~l~~~~---~~~~~~~~~~Dl~d~~~~~~~~~~ 96 (346)
T 4egb_A 22 SNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGN--LNNVKSIQ---DHPNYYFVKGEIQNGELLEHVIKE 96 (346)
T ss_dssp --CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCC--GGGGTTTT---TCTTEEEEECCTTCHHHHHHHHHH
T ss_pred cCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccc--hhhhhhhc---cCCCeEEEEcCCCCHHHHHHHHhh
Confidence 456899999999999999999999999 77888877653221 12222211 125789999999999999999985
Q ss_pred CCCCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccCCC-CCCCccCCCCCCCCChhHH
Q 019795 80 QKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQP-EKIPCVEDFPYGAMNPYGR 158 (335)
Q Consensus 80 ~~~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~-~~~~~~e~~~~~~~~~Y~~ 158 (335)
.++|+|||+|+......+..++...+++|+.++.+++++|++.++++||++||.++||.. ...+++|+++..|.+.|+.
T Consensus 97 ~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~~vy~~~~~~~~~~E~~~~~p~~~Y~~ 176 (346)
T 4egb_A 97 RDVQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKYPHIKLVQVSTDEVYGSLGKTGRFTEETPLAPNSPYSS 176 (346)
T ss_dssp HTCCEEEECCCCC---------CHHHHHHTHHHHHHHHHHHHSTTSEEEEEEEGGGGCCCCSSCCBCTTSCCCCCSHHHH
T ss_pred cCCCEEEECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCchHHhCCCCcCCCcCCCCCCCCCChhHH
Confidence 559999999998765555677788999999999999999999999999999999999986 4568999999999999999
Q ss_pred hHHHHHHHHHHHHhhCCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHHHhCCCCceeEecccCCCCCCceee
Q 019795 159 TKQWCEEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAVR 238 (335)
Q Consensus 159 sK~~~E~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 238 (335)
+|.++|++++.+..+. +++++++||++|||+... ...+.+.+......+.+ +.++| ++...+
T Consensus 177 sK~~~E~~~~~~~~~~-g~~~~ilRp~~v~G~~~~----------~~~~~~~~~~~~~~~~~-~~~~~------~~~~~~ 238 (346)
T 4egb_A 177 SKASADMIALAYYKTY-QLPVIVTRCSNNYGPYQY----------PEKLIPLMVTNALEGKK-LPLYG------DGLNVR 238 (346)
T ss_dssp HHHHHHHHHHHHHHHH-CCCEEEEEECEEESTTCC----------TTSHHHHHHHHHHTTCC-CEEET------TSCCEE
T ss_pred HHHHHHHHHHHHHHHh-CCCEEEEeecceeCcCCC----------ccchHHHHHHHHHcCCC-ceeeC------CCCeEE
Confidence 9999999999998877 999999999999998532 22455555444444444 67778 788999
Q ss_pred eeeeHhhhhc----------cCceEEecCCccccHHHHHHHHHHHhCCCCC-ceeCCCCCCccceeeccHHHHHHhcCCc
Q 019795 239 DYIHVMDLAD----------GCIAYNLGNGKGISVLEMVAAFEKASGKKIP-IKFCPRRVGDATAVYAATDKAHKELGWK 307 (335)
Q Consensus 239 ~~v~~~D~~~----------~~~~~nv~~~~~~s~~el~~~i~~~~g~~~~-~~~~~~~~~~~~~~~~d~~k~~~~Lg~~ 307 (335)
+|+|++|+++ .+++||+++++.+|+.|+++.+.+.+|.+.+ +...+..+.......+|++|+++.|||+
T Consensus 239 ~~i~v~Dva~a~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~ 318 (346)
T 4egb_A 239 DWLHVTDHCSAIDVVLHKGRVGEVYNIGGNNEKTNVEVVEQIITLLGKTKKDIEYVTDRLGHDRRYAINAEKMKNEFDWE 318 (346)
T ss_dssp CEEEHHHHHHHHHHHHHHCCTTCEEEECCSCCEEHHHHHHHHHHHHTCCGGGCEEECC--CCCSCCCBCCHHHHHHHCCC
T ss_pred eeEEHHHHHHHHHHHHhcCCCCCEEEECCCCceeHHHHHHHHHHHhCCCcccccccCCCCCCcceeeccHHHHHHHcCCC
Confidence 9999999997 4789999999999999999999999998766 4444545555667789999999999999
Q ss_pred cccCHHHHHHHHHHHHhcCCCCcccC
Q 019795 308 PKYGIEDMCAHQWNWAKNNPMGYQTK 333 (335)
Q Consensus 308 p~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (335)
|+++++++|+++++|+++++..|.+-
T Consensus 319 p~~~~~e~l~~~~~~~~~~~~~~~~~ 344 (346)
T 4egb_A 319 PKYTFEQGLQETVQWYEKNEEWWKPL 344 (346)
T ss_dssp CCCCHHHHHHHHHHHHHHCHHHHGGG
T ss_pred CCCCHHHHHHHHHHHHHhhhhhhhhc
Confidence 99999999999999999988766543
|
| >3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-49 Score=353.02 Aligned_cols=291 Identities=21% Similarity=0.280 Sum_probs=246.1
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCCC
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKFE 83 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~d 83 (335)
||+|||||||||||++|+++|+++|++|++++|++... . + +++.++.+|++ .+++.++++ ++|
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~----~---------~~~~~~~~Dl~-~~~~~~~~~--~~d 64 (311)
T 3m2p_A 2 SLKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNK-A----I---------NDYEYRVSDYT-LEDLINQLN--DVD 64 (311)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC-------------------CCEEEECCCC-HHHHHHHTT--TCS
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCcc-c----C---------CceEEEEcccc-HHHHHHhhc--CCC
Confidence 58999999999999999999999999999999973221 1 1 36889999999 999999998 899
Q ss_pred EEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccCCCCCCCccCCCCCCCCChhHHhHHHH
Q 019795 84 AVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQWC 163 (335)
Q Consensus 84 ~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~Y~~sK~~~ 163 (335)
+|||+|+..... ++...+++|+.++.+++++|++.++++|||+||.++||.....+++|+++..|.+.|+.+|.++
T Consensus 65 ~Vih~a~~~~~~----~~~~~~~~n~~~~~~ll~a~~~~~~~r~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~ 140 (311)
T 3m2p_A 65 AVVHLAATRGSQ----GKISEFHDNEILTQNLYDACYENNISNIVYASTISAYSDETSLPWNEKELPLPDLMYGVSKLAC 140 (311)
T ss_dssp EEEECCCCCCSS----SCGGGTHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCCCGGGCSBCTTSCCCCSSHHHHHHHHH
T ss_pred EEEEccccCCCC----ChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccHHHhCCCCCCCCCCCCCCCCCchhHHHHHHH
Confidence 999999985432 5668899999999999999999999999999999999988778999999999999999999999
Q ss_pred HHHHHHHHhhCCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHHHhCCCCceeEecccCCCCCCceeeeeeeH
Q 019795 164 EEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAVRDYIHV 243 (335)
Q Consensus 164 E~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~v~~ 243 (335)
|++++.+..+. +++++++||+++||+... ...+.+.+...+..+.+ +.++| ++.+.++|+|+
T Consensus 141 E~~~~~~~~~~-g~~~~ilRp~~v~G~~~~----------~~~~~~~~~~~~~~~~~-~~~~g------~~~~~~~~v~v 202 (311)
T 3m2p_A 141 EHIGNIYSRKK-GLCIKNLRFAHLYGFNEK----------NNYMINRFFRQAFHGEQ-LTLHA------NSVAKREFLYA 202 (311)
T ss_dssp HHHHHHHHHHS-CCEEEEEEECEEECSCC------------CCHHHHHHHHHHTCCC-EEESS------BCCCCEEEEEH
T ss_pred HHHHHHHHHHc-CCCEEEEeeCceeCcCCC----------CCCHHHHHHHHHHcCCC-eEEec------CCCeEEceEEH
Confidence 99999998877 999999999999999533 11355544444444444 67777 78899999999
Q ss_pred hhhhc----------cCceEEecCCccccHHHHHHHHHHHhCCCCCceeCCC-CCCccceeeccHHHHHHhcCCccccCH
Q 019795 244 MDLAD----------GCIAYNLGNGKGISVLEMVAAFEKASGKKIPIKFCPR-RVGDATAVYAATDKAHKELGWKPKYGI 312 (335)
Q Consensus 244 ~D~~~----------~~~~~nv~~~~~~s~~el~~~i~~~~g~~~~~~~~~~-~~~~~~~~~~d~~k~~~~Lg~~p~~~~ 312 (335)
+|+++ .+++||+++++.+|+.|+++.+.+.+|.+.++...+. .........+|++|+++.|||+|++++
T Consensus 203 ~Dva~a~~~~~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~ 282 (311)
T 3m2p_A 203 KDAAKSVIYALKQEKVSGTFNIGSGDALTNYEVANTINNAFGNKDNLLVKNPNANEGIHSSYMDSSKAKELLDFSTDYNF 282 (311)
T ss_dssp HHHHHHHHHHTTCTTCCEEEEECCSCEECHHHHHHHHHHHTTCTTCEEECSSSBCCSCCCBCBCCHHHHHHSCCCCSCCH
T ss_pred HHHHHHHHHHHhcCCCCCeEEeCCCCcccHHHHHHHHHHHhCCCCcceecCCCCCCCcCceecCHHHHHHHhCCCcccCH
Confidence 99997 4789999999999999999999999999888877776 566677889999999999999999999
Q ss_pred HHHHHHHHHHHhcCCCCcccC
Q 019795 313 EDMCAHQWNWAKNNPMGYQTK 333 (335)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~ 333 (335)
+++|+++++|++++++-|++.
T Consensus 283 ~~~l~~~~~~~~~~~~~~~~~ 303 (311)
T 3m2p_A 283 ATAVEEIHLLMRGLDDVPLWY 303 (311)
T ss_dssp HHHHHHHHHHHCC--------
T ss_pred HHHHHHHHHHHHhcccCccee
Confidence 999999999999999988764
|
| >1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-48 Score=357.01 Aligned_cols=327 Identities=40% Similarity=0.731 Sum_probs=265.2
Q ss_pred CCeEEEEcCCChhhHHHHHHHH-hCCCeEEEEecCCCCc--------hhhH-HhhhhhcCCccccc---eeEEEccCCCH
Q 019795 4 EKNILVTGGAGFIGTHCALQLL-QGGFKVVLIDNLHNSV--------PEAV-DRVKDLAGPELAKK---LEFHVGDLRNK 70 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~-~~g~~V~~~~r~~~~~--------~~~~-~~~~~~~~~~~~~~---i~~~~~Dl~d~ 70 (335)
+|+|||||||||||++|+++|+ ++|++|++++|..... .... ..+.+..+.....+ +.++.+|++|.
T Consensus 2 ~m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~ 81 (397)
T 1gy8_A 2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE 81 (397)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCCH
Confidence 4699999999999999999999 9999999999875542 1111 11122111000124 88999999999
Q ss_pred HHHHHHHhcCC-CCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccCCCC-------CC
Q 019795 71 DDLDKLFSSQK-FEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQPE-------KI 142 (335)
Q Consensus 71 ~~~~~~~~~~~-~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~-------~~ 142 (335)
+.+.++++..+ +|+|||+|+......+.++++..+++|+.++.+++++|++.++++||++||.++||... ..
T Consensus 82 ~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~~ 161 (397)
T 1gy8_A 82 DFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSSAAIFGNPTMGSVSTNAE 161 (397)
T ss_dssp HHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGTBSCCC-----CCC
T ss_pred HHHHHHHHhcCCCCEEEECCCccCcCcchhhHHHHHHHHhHHHHHHHHHHHHhCCCEEEEECCHHHhCCCCccccccccc
Confidence 99999997655 99999999987654456778899999999999999999999889999999999998765 57
Q ss_pred CccCCCCCCCCChhHHhHHHHHHHHHHHHhhCCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHHHH-----HHHhC
Q 019795 143 PCVEDFPYGAMNPYGRTKQWCEEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQ-----QVAVG 217 (335)
Q Consensus 143 ~~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~-----~~~~~ 217 (335)
+++|+++..|.+.|+.+|.++|.+++.++.++ +++++++||++|||+++.+.+|+.... ...+++.+. .++.+
T Consensus 162 ~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~-gi~~~ilRp~~v~G~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~ 239 (397)
T 1gy8_A 162 PIDINAKKSPESPYGESKLIAERMIRDCAEAY-GIKGICLRYFNACGAHEDGDIGEHYQG-STHLIPIILGRVMSDIAPD 239 (397)
T ss_dssp CBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHH-CCEEEEEEECEEECCCTTSSCSCCSTT-CCSHHHHHHHHHHHHHSCC
T ss_pred CcCccCCCCCCCchHHHHHHHHHHHHHHHHHH-CCcEEEEeccceeCCCccccccccccc-hhHHHHHHHHHHHHHHHhc
Confidence 89999999899999999999999999998887 999999999999999876666654322 345666665 55555
Q ss_pred CC----------CceeEecccCCCCCCceeeeeeeHhhhhc-----------cC--------ceEEecCCccccHHHHHH
Q 019795 218 RH----------PELNVYGQDYPTKDGSAVRDYIHVMDLAD-----------GC--------IAYNLGNGKGISVLEMVA 268 (335)
Q Consensus 218 ~~----------~~~~~~g~~~~~~~~~~~~~~v~~~D~~~-----------~~--------~~~nv~~~~~~s~~el~~ 268 (335)
.. +.+.++|+..+.+++.+.++|+|++|+++ .+ ++||+++++.+|+.|+++
T Consensus 240 ~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~v~v~Dva~a~~~~l~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~ 319 (397)
T 1gy8_A 240 QRLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFSVFNLGTSRGYSVREVIE 319 (397)
T ss_dssp -----------CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHTCCTTTGGGSEEEEEESCSCCEEHHHHHH
T ss_pred CccccccccccCCCceeecCcccCCCCCeeEeeEeHHHHHHHHHHHHhcccccccccccCCCcEEEeCCCCcccHHHHHH
Confidence 43 23778875555557889999999999987 23 799999999999999999
Q ss_pred HHHHHhCCCCCceeCCCCCCccceeeccHHHHHHhcCCcccc-CHHHHHHHHHHHHhcCCCCccc
Q 019795 269 AFEKASGKKIPIKFCPRRVGDATAVYAATDKAHKELGWKPKY-GIEDMCAHQWNWAKNNPMGYQT 332 (335)
Q Consensus 269 ~i~~~~g~~~~~~~~~~~~~~~~~~~~d~~k~~~~Lg~~p~~-~~~~~~~~~~~~~~~~~~~~~~ 332 (335)
.+.+.+|.+.++...+....+.....+|++|+++.|||+|++ +++++|+++++|++++...|.+
T Consensus 320 ~i~~~~g~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~l~e~l~~~~~~~~~~~~~~~~ 384 (397)
T 1gy8_A 320 VARKTTGHPIPVRECGRREGDPAYLVAASDKAREVLGWKPKYDTLEAIMETSWKFQRTHPNGYAS 384 (397)
T ss_dssp HHHHHHCCCCCEEEECCCTTCCSEECBCCHHHHHHTCCCCSCCSHHHHHHHHHHHHHTCTTTTC-
T ss_pred HHHHHhCCCCCeeeCCCCCCcccccccCHHHHHHHhCCCCCcCCHHHHHHHHHHHHHhcccccCc
Confidence 999999988777766655556677889999999999999999 9999999999999998776643
|
| >3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-49 Score=352.42 Aligned_cols=297 Identities=27% Similarity=0.446 Sum_probs=240.5
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCCC
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKFE 83 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~d 83 (335)
||+|||||||||||++|+++|+++| .++++++......... ...+.++.+|++| +++.++++ ++|
T Consensus 1 M~~vlVTGatG~iG~~l~~~L~~~g-~~v~~~~~~~~~~~~~-----------~~~~~~~~~Dl~~-~~~~~~~~--~~d 65 (313)
T 3ehe_A 1 MSLIVVTGGAGFIGSHVVDKLSESN-EIVVIDNLSSGNEEFV-----------NEAARLVKADLAA-DDIKDYLK--GAE 65 (313)
T ss_dssp --CEEEETTTSHHHHHHHHHHTTTS-CEEEECCCSSCCGGGS-----------CTTEEEECCCTTT-SCCHHHHT--TCS
T ss_pred CCEEEEECCCchHHHHHHHHHHhCC-CEEEEEcCCCCChhhc-----------CCCcEEEECcCCh-HHHHHHhc--CCC
Confidence 5699999999999999999999999 5555554433322111 1568899999999 88999998 899
Q ss_pred EEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccCCCCCCCccCCCCCCCCChhHHhHHHH
Q 019795 84 AVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQWC 163 (335)
Q Consensus 84 ~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~Y~~sK~~~ 163 (335)
+|||+|+......+.++++..+++|+.++.+++++|++.++++||++||.++||.....+.+|+.+..|.+.|+.+|..+
T Consensus 66 ~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~~~ 145 (313)
T 3ehe_A 66 EVWHIAANPDVRIGAENPDEIYRNNVLATYRLLEAMRKAGVSRIVFTSTSTVYGEAKVIPTPEDYPTHPISLYGASKLAC 145 (313)
T ss_dssp EEEECCCCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEECCGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHH
T ss_pred EEEECCCCCChhhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCchHHhCcCCCCCCCCCCCCCCCCHHHHHHHHH
Confidence 99999997655556778889999999999999999999998999999999999988888999999999999999999999
Q ss_pred HHHHHHHHhhCCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHHHhCCCCceeEecccCCCCCCceeeeeeeH
Q 019795 164 EEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAVRDYIHV 243 (335)
Q Consensus 164 E~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~v~~ 243 (335)
|.+++.++.++ +++++++||++|||+... ...+..++.....+..+ +.++| ++.+.++|+|+
T Consensus 146 e~~~~~~~~~~-g~~~~ilRp~~v~G~~~~----------~~~~~~~~~~~~~~~~~-~~~~~------~g~~~~~~i~v 207 (313)
T 3ehe_A 146 EALIESYCHTF-DMQAWIYRFANVIGRRST----------HGVIYDFIMKLKRNPEE-LEILG------NGEQNKSYIYI 207 (313)
T ss_dssp HHHHHHHHHHT-TCEEEEEECSCEESTTCC----------CSHHHHHHHHHHHCTTE-EEEST------TSCCEECCEEH
T ss_pred HHHHHHHHHhc-CCCEEEEeeccccCcCCC----------cChHHHHHHHHHcCCCc-eEEeC------CCCeEEeEEEH
Confidence 99999999888 999999999999998532 12233455555555444 67788 78899999999
Q ss_pred hhhhc----------cCceEEecCCccccHHHHHHHHHHHhCCCCCceeCCC---CCCccceeeccHHHHHHhcCCcccc
Q 019795 244 MDLAD----------GCIAYNLGNGKGISVLEMVAAFEKASGKKIPIKFCPR---RVGDATAVYAATDKAHKELGWKPKY 310 (335)
Q Consensus 244 ~D~~~----------~~~~~nv~~~~~~s~~el~~~i~~~~g~~~~~~~~~~---~~~~~~~~~~d~~k~~~~Lg~~p~~ 310 (335)
+|+++ .+++||+++++.+|+.|+++.+.+.+|.+..+...+. ...+.....+|++|+ +.|||+|++
T Consensus 208 ~Dva~a~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~d~~k~-~~lG~~p~~ 286 (313)
T 3ehe_A 208 SDCVDAMLFGLRGDERVNIFNIGSEDQIKVKRIAEIVCEELGLSPRFRFTGGDRGWKGDVPVMLLSIEKL-KRLGWKPRY 286 (313)
T ss_dssp HHHHHHHHHHTTCCSSEEEEECCCSCCEEHHHHHHHHHHHTTCCCEEEEC------------CCBCCHHH-HHHTCCCSC
T ss_pred HHHHHHHHHHhccCCCCceEEECCCCCeeHHHHHHHHHHHhCCCCceEECCCccCCccccceeccCHHHH-HHcCCCCCC
Confidence 99997 4689999999999999999999999998876665443 234455678999999 569999999
Q ss_pred CHHHHHHHHHHHHhcCCCCcccCC
Q 019795 311 GIEDMCAHQWNWAKNNPMGYQTKR 334 (335)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~ 334 (335)
+++++|+++++|+++++...++++
T Consensus 287 ~~~e~l~~~~~~~~~~~~~~~~~~ 310 (313)
T 3ehe_A 287 NSEEAVRMAVRDLVEDLDEEGHHH 310 (313)
T ss_dssp CHHHHHHHHHHHHHHHHHC-----
T ss_pred CHHHHHHHHHHHHHhCcccccccc
Confidence 999999999999999887666553
|
| >3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-48 Score=350.17 Aligned_cols=291 Identities=29% Similarity=0.460 Sum_probs=245.0
Q ss_pred CeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCCCE
Q 019795 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKFEA 84 (335)
Q Consensus 5 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~d~ 84 (335)
|+|||||||||||++|+++|+++|++|++++|+........ ...+.++.+|++|.+ +.++++ . |+
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-----------~~~~~~~~~Dl~d~~-~~~~~~--~-d~ 65 (312)
T 3ko8_A 1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREFV-----------NPSAELHVRDLKDYS-WGAGIK--G-DV 65 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCGGGS-----------CTTSEEECCCTTSTT-TTTTCC--C-SE
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCchhhc-----------CCCceEEECccccHH-HHhhcC--C-CE
Confidence 58999999999999999999999999999999766543221 157889999999988 888776 4 99
Q ss_pred EEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccCCCCCCCccCCCCCCCCChhHHhHHHHH
Q 019795 85 VIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQWCE 164 (335)
Q Consensus 85 vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~Y~~sK~~~E 164 (335)
|||+|+......+..++...+++|+.++.+++++|++.++++|||+||.++||.....+++|+.+..|.+.|+.+|..+|
T Consensus 66 vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~vyg~~~~~~~~e~~~~~p~~~Y~~sK~~~e 145 (312)
T 3ko8_A 66 VFHFAANPEVRLSTTEPIVHFNENVVATFNVLEWARQTGVRTVVFASSSTVYGDADVIPTPEEEPYKPISVYGAAKAAGE 145 (312)
T ss_dssp EEECCSSCSSSGGGSCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHH
T ss_pred EEECCCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeCcHHHhCCCCCCCCCCCCCCCCCChHHHHHHHHH
Confidence 99999976656667788899999999999999999999999999999999999988889999999999999999999999
Q ss_pred HHHHHHHhhCCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHHHhCCCCceeEecccCCCCCCceeeeeeeHh
Q 019795 165 EIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAVRDYIHVM 244 (335)
Q Consensus 165 ~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~v~~~ 244 (335)
++++.++.++ +++++++||+++||+... ...+..++.....+..+ +.++| ++.+.++|+|++
T Consensus 146 ~~~~~~~~~~-g~~~~~lrp~~v~g~~~~----------~~~~~~~~~~~~~~~~~-~~~~~------~g~~~~~~i~v~ 207 (312)
T 3ko8_A 146 VMCATYARLF-GVRCLAVRYANVVGPRLR----------HGVIYDFIMKLRRNPNV-LEVLG------DGTQRKSYLYVR 207 (312)
T ss_dssp HHHHHHHHHH-CCEEEEEEECEEECTTCC----------SSHHHHHHHHHHHCTTE-EEEC----------CEECEEEHH
T ss_pred HHHHHHHHHh-CCCEEEEeeccccCcCCC----------CChHHHHHHHHHhCCCC-eEEcC------CCCeEEeeEEHH
Confidence 9999998887 999999999999998532 12233455555555444 67777 788999999999
Q ss_pred hhhc--------------cCceEEecCCccccHHHHHHHHHHHhCCCCCceeCCC------CCCccceeeccHHHHHHhc
Q 019795 245 DLAD--------------GCIAYNLGNGKGISVLEMVAAFEKASGKKIPIKFCPR------RVGDATAVYAATDKAHKEL 304 (335)
Q Consensus 245 D~~~--------------~~~~~nv~~~~~~s~~el~~~i~~~~g~~~~~~~~~~------~~~~~~~~~~d~~k~~~~L 304 (335)
|+++ .+++||+++++.+|+.|+++.+.+.+|.+.++...+. .+.+.....+|++|+++.|
T Consensus 208 Dva~a~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~l 287 (312)
T 3ko8_A 208 DAVEATLAAWKKFEEMDAPFLALNVGNVDAVRVLDIAQIVAEVLGLRPEIRLVPSTPDGRGWPGDVKYMTLAVTKLMKLT 287 (312)
T ss_dssp HHHHHHHHHHHHHHHSCCSEEEEEESCSSCEEHHHHHHHHHHHHTCCCEEEEC----------CCCSEECBCCHHHHHHH
T ss_pred HHHHHHHHHHHhccccCCCCcEEEEcCCCceeHHHHHHHHHHHhCCCCceeecCccccccCCCCCccccccCHHHHHHHh
Confidence 9987 3578999999999999999999999998877766443 2345567889999999999
Q ss_pred CCccccCHHHHHHHHHHHHhcCCC
Q 019795 305 GWKPKYGIEDMCAHQWNWAKNNPM 328 (335)
Q Consensus 305 g~~p~~~~~~~~~~~~~~~~~~~~ 328 (335)
||+|+++++++|+++++|++++++
T Consensus 288 G~~p~~~~~~~l~~~~~~~~~~~~ 311 (312)
T 3ko8_A 288 GWRPTMTSAEAVKKTAEDLAKELW 311 (312)
T ss_dssp CCCCSSCHHHHHHHHHHHHHHHHC
T ss_pred CCCCCCCHHHHHHHHHHHHHhhhc
Confidence 999999999999999999998764
|
| >1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-47 Score=345.97 Aligned_cols=308 Identities=28% Similarity=0.401 Sum_probs=250.0
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCC
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQK 81 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~ 81 (335)
++||+|||||||||||++|+++|+++|++|++++|+..........+.+........++.++.+|++|.+++.++++ +
T Consensus 25 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~ 102 (352)
T 1sb8_A 25 AQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACA--G 102 (352)
T ss_dssp HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHT--T
T ss_pred ccCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHhc--C
Confidence 35789999999999999999999999999999999765433322322211110001578899999999999999998 8
Q ss_pred CCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccCCCCCCCccCCCCCCCCChhHHhHH
Q 019795 82 FEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQ 161 (335)
Q Consensus 82 ~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~Y~~sK~ 161 (335)
+|+|||+|+......+..+++..+++|+.++.+++++|++.++++||++||.++|+.....+++|+++..|.+.|+.+|.
T Consensus 103 ~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~ 182 (352)
T 1sb8_A 103 VDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASSSTYGDHPGLPKVEDTIGKPLSPYAVTKY 182 (352)
T ss_dssp CSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSSBCTTCCCCCCSHHHHHHH
T ss_pred CCEEEECCcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHhcCCCCCCCCCCCCCCCCCChhHHHHH
Confidence 99999999986554456778899999999999999999999999999999999999877778999999999999999999
Q ss_pred HHHHHHHHHHhhCCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHH-HHHHHHhCCCCceeEecccCCCCCCceeeee
Q 019795 162 WCEEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMP-YIQQVAVGRHPELNVYGQDYPTKDGSAVRDY 240 (335)
Q Consensus 162 ~~E~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 240 (335)
.+|.+++.++.+. +++++++||++|||+.... ......+++ ++..+..+.. +.++| ++.+.++|
T Consensus 183 ~~e~~~~~~~~~~-g~~~~ilRp~~v~G~~~~~------~~~~~~~~~~~~~~~~~~~~--~~~~g------~g~~~~~~ 247 (352)
T 1sb8_A 183 VNELYADVFSRCY-GFSTIGLRYFNVFGRRQDP------NGAYAAVIPKWTSSMIQGDD--VYING------DGETSRDF 247 (352)
T ss_dssp HHHHHHHHHHHHH-CCCCEEEEECCEECTTCCC------CSTTCCHHHHHHHHHHHTCC--CEEES------SSCCEECC
T ss_pred HHHHHHHHHHHHc-CCCEEEEEECceeCcCCCC------CcchhhHHHHHHHHHHCCCC--cEEeC------CCCceEee
Confidence 9999999988777 8999999999999985321 111123444 4444555543 55677 78889999
Q ss_pred eeHhhhhc------------cCceEEecCCccccHHHHHHHHHHHh---CCCCCc--eeCCCCCCccceeeccHHHHHHh
Q 019795 241 IHVMDLAD------------GCIAYNLGNGKGISVLEMVAAFEKAS---GKKIPI--KFCPRRVGDATAVYAATDKAHKE 303 (335)
Q Consensus 241 v~~~D~~~------------~~~~~nv~~~~~~s~~el~~~i~~~~---g~~~~~--~~~~~~~~~~~~~~~d~~k~~~~ 303 (335)
+|++|+++ .+++||+++++.+|+.|+++.+.+.+ |.+.+. .+.+..+.+.....+|++|+++.
T Consensus 248 i~v~Dva~a~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~ 327 (352)
T 1sb8_A 248 CYIENTVQANLLAATAGLDARNQVYNIAVGGRTSLNQLFFALRDGLAENGVSYHREPVYRDFREGDVRHSLADISKAAKL 327 (352)
T ss_dssp EEHHHHHHHHHHHHTCCGGGCSEEEEESCSCCEEHHHHHHHHHHHHHHTTCCCCCCCEEECCCTTCCSBCCBCCHHHHHH
T ss_pred EEHHHHHHHHHHHHhccccCCCceEEeCCCCCccHHHHHHHHHHHHHhcCCCCCCCceecCCCccchhhccCCHHHHHHH
Confidence 99999986 36799999999999999999999999 877653 23333344556778999999999
Q ss_pred cCCccccCHHHHHHHHHHHHhcC
Q 019795 304 LGWKPKYGIEDMCAHQWNWAKNN 326 (335)
Q Consensus 304 Lg~~p~~~~~~~~~~~~~~~~~~ 326 (335)
|||+|+++++++|+++++|++++
T Consensus 328 lG~~p~~~~~e~l~~~~~~~~~~ 350 (352)
T 1sb8_A 328 LGYAPKYDVSAGVALAMPWYIMF 350 (352)
T ss_dssp TCCCCCCCHHHHHHHHHHHHHHH
T ss_pred hCCCCCCCHHHHHHHHHHHHHHh
Confidence 99999999999999999999864
|
| >3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.9e-48 Score=352.77 Aligned_cols=302 Identities=21% Similarity=0.347 Sum_probs=246.7
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhC-CCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCC-CHHHHHHHHhc
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQG-GFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLR-NKDDLDKLFSS 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~-d~~~~~~~~~~ 79 (335)
|+||+|||||||||||++|+++|+++ |++|++++|+......... ..++.++.+|++ |.+.+.++++
T Consensus 22 m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~----------~~~v~~~~~Dl~~d~~~~~~~~~- 90 (372)
T 3slg_A 22 MKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVK----------HERMHFFEGDITINKEWVEYHVK- 90 (372)
T ss_dssp -CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGG----------STTEEEEECCTTTCHHHHHHHHH-
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhcc----------CCCeEEEeCccCCCHHHHHHHhc-
Confidence 56789999999999999999999998 9999999998655432211 157999999999 9999999998
Q ss_pred CCCCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccCCCCCCCccCCCCC-------CC
Q 019795 80 QKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQPEKIPCVEDFPY-------GA 152 (335)
Q Consensus 80 ~~~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~-------~~ 152 (335)
++|+|||+|+.........++...+++|+.++.+++++|++.+ ++|||+||.++||.....+++|+++. .|
T Consensus 91 -~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~p~~~p 168 (372)
T 3slg_A 91 -KCDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYG-KHLVFPSTSEVYGMCADEQFDPDASALTYGPINKP 168 (372)
T ss_dssp -HCSEEEECBCCCCHHHHHHCHHHHHHHHTTTTHHHHHHHHHHT-CEEEEECCGGGGBSCCCSSBCTTTCCEEECCTTCT
T ss_pred -cCCEEEEcCccccHHHHhhCHHHHHHHHHHHHHHHHHHHHHhC-CcEEEeCcHHHhCCCCCCCCCccccccccCCCCCC
Confidence 8999999999877666677888999999999999999999998 89999999999998877788888754 56
Q ss_pred CChhHHhHHHHHHHHHHHHhhCCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHH-HHHHHhCCCCceeEecccCCC
Q 019795 153 MNPYGRTKQWCEEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPY-IQQVAVGRHPELNVYGQDYPT 231 (335)
Q Consensus 153 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~ 231 (335)
.+.|+.+|.++|++++.+..+ +++++++||++|||+.....++.... ...+++. +..+..+. + +.++|
T Consensus 169 ~~~Y~~sK~~~E~~~~~~~~~--g~~~~ilRp~~v~G~~~~~~~~~~~~--~~~~~~~~~~~~~~~~-~-~~~~~----- 237 (372)
T 3slg_A 169 RWIYACSKQLMDRVIWGYGME--GLNFTLFRPFNWIGPGLDSIYTPKEG--SSRVVTQFLGHIVRGE-N-ISLVD----- 237 (372)
T ss_dssp THHHHHHHHHHHHHHHHHHTT--TCEEEEEEECSEECSSCCCTTCSBSC--SCHHHHHHHHHHHHTC-C-EEEGG-----
T ss_pred CCcHHHHHHHHHHHHHHHHHC--CCCEEEEccccccCCCcccccccccc--cchHHHHHHHHHHcCC-C-cEEeC-----
Confidence 778999999999999988876 89999999999999975543322111 2335554 44445554 4 67777
Q ss_pred CCCceeeeeeeHhhhhc-------------cCceEEecC-CccccHHHHHHHHHHHhCCCCCceeCCC------------
Q 019795 232 KDGSAVRDYIHVMDLAD-------------GCIAYNLGN-GKGISVLEMVAAFEKASGKKIPIKFCPR------------ 285 (335)
Q Consensus 232 ~~~~~~~~~v~~~D~~~-------------~~~~~nv~~-~~~~s~~el~~~i~~~~g~~~~~~~~~~------------ 285 (335)
++.+.++|+|++|+++ .+++||+++ ++.+|+.|+++.+.+.+|.+.++...+.
T Consensus 238 -~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~ 316 (372)
T 3slg_A 238 -GGSQKRAFTYVDDGISALMKIIENSNGVATGKIYNIGNPNNNFSVRELANKMLELAAEFPEYADSAKRVKLVETTSGAY 316 (372)
T ss_dssp -GGCCEEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECCTTCEEEHHHHHHHHHHHHHHCTTTHHHHHTCCEEEC-----
T ss_pred -CCceEEEEEEHHHHHHHHHHHHhcccCcCCCceEEeCCCCCCccHHHHHHHHHHHhCCCcccccccccceeeecccccc
Confidence 7889999999999987 268999999 4899999999999999997655432221
Q ss_pred ---CCCccceeeccHHHHHHhcCCccccCHHHHHHHHHHHHhcCCC
Q 019795 286 ---RVGDATAVYAATDKAHKELGWKPKYGIEDMCAHQWNWAKNNPM 328 (335)
Q Consensus 286 ---~~~~~~~~~~d~~k~~~~Lg~~p~~~~~~~~~~~~~~~~~~~~ 328 (335)
...+.....+|++|+++.|||+|+++++++|+++++|++++..
T Consensus 317 ~~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~~~ 362 (372)
T 3slg_A 317 YGNGYQDVQNRVPKIENTMQELGWAPQFTFDDALRQIFEAYRGHVA 362 (372)
T ss_dssp --------CCCCBCCHHHHHHHTCCCCCCHHHHHHHHHHHHTTCHH
T ss_pred ccCCccccceeecCHHHHHHHcCCCCCCCHHHHHHHHHHHHHHHHH
Confidence 0124456788999999999999999999999999999998643
|
| >2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-46 Score=338.59 Aligned_cols=291 Identities=23% Similarity=0.324 Sum_probs=244.1
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCC
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKF 82 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~ 82 (335)
++|+|||||||||||++|+++|+++|++|++++|+... .. + ++.++.+|++|.+++.++++..++
T Consensus 11 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~~----l----------~~~~~~~Dl~d~~~~~~~~~~~~~ 75 (321)
T 2pk3_A 11 GSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-KL----P----------NVEMISLDIMDSQRVKKVISDIKP 75 (321)
T ss_dssp --CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-CC----T----------TEEEEECCTTCHHHHHHHHHHHCC
T ss_pred CcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcc-cc----c----------eeeEEECCCCCHHHHHHHHHhcCC
Confidence 57899999999999999999999999999999997543 11 1 467899999999999999985459
Q ss_pred CEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHc-CCCEEEEeccccccCCC--CCCCccCCCCCCCCChhHHh
Q 019795 83 EAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKY-NCKKLVFSSSATIYGQP--EKIPCVEDFPYGAMNPYGRT 159 (335)
Q Consensus 83 d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~-~~~~~v~~Ss~~vyg~~--~~~~~~e~~~~~~~~~Y~~s 159 (335)
|+|||+|+......+.++++..+++|+.++.+++++|++. ++++||++||.++||.. ...+++|+++..|.+.|+.+
T Consensus 76 d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~E~~~~~~~~~Y~~s 155 (321)
T 2pk3_A 76 DYIFHLAAKSSVKDSWLNKKGTFSTNVFGTLHVLDAVRDSNLDCRILTIGSSEEYGMILPEESPVSEENQLRPMSPYGVS 155 (321)
T ss_dssp SEEEECCSCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEEGGGTBSCCGGGCSBCTTSCCBCCSHHHHH
T ss_pred CEEEEcCcccchhhhhhcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEccHHhcCCCCCCCCCCCCCCCCCCCCccHHH
Confidence 9999999987655556688899999999999999999876 58899999999999876 56789999999999999999
Q ss_pred HHHHHHHHHHHHhhCCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHH-HHHHHh---CC-CCceeEecccCCCCCC
Q 019795 160 KQWCEEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPY-IQQVAV---GR-HPELNVYGQDYPTKDG 234 (335)
Q Consensus 160 K~~~E~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~-~~~~~~---~~-~~~~~~~g~~~~~~~~ 234 (335)
|.++|.+++.++.++ +++++++||+++||+... ...+.+. +..... +. .+ +.+++ ++
T Consensus 156 K~~~E~~~~~~~~~~-gi~~~ilrp~~v~g~~~~----------~~~~~~~~~~~~~~~~~g~~~~-~~~~~------~~ 217 (321)
T 2pk3_A 156 KASVGMLARQYVKAY-GMDIIHTRTFNHIGPGQS----------LGFVTQDFAKQIVDIEMEKQEP-IIKVG------NL 217 (321)
T ss_dssp HHHHHHHHHHHHHHH-CCEEEEEEECEEECTTCC----------TTSHHHHHHHHHHHHHTTSSCS-EEEES------CS
T ss_pred HHHHHHHHHHHHHHc-CCCEEEEEeCcccCcCCC----------CCchHHHHHHHHHHHhcCCCCC-eEEeC------CC
Confidence 999999999988877 999999999999999533 1223443 333333 42 34 56677 67
Q ss_pred ceeeeeeeHhhhhc----------cCceEEecCCccccHHHHHHHHHHHhCCCCCceeCC--CCCCccceeeccHHHHHH
Q 019795 235 SAVRDYIHVMDLAD----------GCIAYNLGNGKGISVLEMVAAFEKASGKKIPIKFCP--RRVGDATAVYAATDKAHK 302 (335)
Q Consensus 235 ~~~~~~v~~~D~~~----------~~~~~nv~~~~~~s~~el~~~i~~~~g~~~~~~~~~--~~~~~~~~~~~d~~k~~~ 302 (335)
.+.++|+|++|+++ .+++||+++++.+|+.|+++.+.+.+|.+.++...| ..+.+.....+|++|+++
T Consensus 218 ~~~~~~v~v~Dva~a~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~p~~~~~~~~~~~~~d~~k~~~ 297 (321)
T 2pk3_A 218 EAVRDFTDVRDIVQAYWLLSQYGKTGDVYNVCSGIGTRIQDVLDLLLAMANVKIDTELNPLQLRPSEVPTLIGSNKRLKD 297 (321)
T ss_dssp SCEEEEEEHHHHHHHHHHHHHHCCTTCEEEESCSCEEEHHHHHHHHHHHSSSCCEEEECGGGCCSSCCSBCCBCCHHHHH
T ss_pred CcEEeeEEHHHHHHHHHHHHhCCCCCCeEEeCCCCCeeHHHHHHHHHHHhCCCCceeeccccCCCcccchhccCHHHHHH
Confidence 88999999999997 378999999999999999999999999877666555 334445678899999999
Q ss_pred hcCCccccCHHHHHHHHHHHHhcC
Q 019795 303 ELGWKPKYGIEDMCAHQWNWAKNN 326 (335)
Q Consensus 303 ~Lg~~p~~~~~~~~~~~~~~~~~~ 326 (335)
.|||+|+++++++|+++++|++++
T Consensus 298 ~lG~~p~~~~~e~l~~~~~~~~~~ 321 (321)
T 2pk3_A 298 STGWKPRIPLEKSLFEILQSYRQA 321 (321)
T ss_dssp HHCCCCCSCHHHHHHHHHHHHHTC
T ss_pred HcCCCcCCCHHHHHHHHHHHHhcC
Confidence 999999999999999999999864
|
| >2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.6e-47 Score=338.70 Aligned_cols=294 Identities=33% Similarity=0.524 Sum_probs=245.2
Q ss_pred CeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCCCE
Q 019795 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKFEA 84 (335)
Q Consensus 5 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~d~ 84 (335)
|+|||||||||||++++++|+++|++|++++|....... .+ ..++.++.+|++|.+++.++++..++|+
T Consensus 1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~---~~--------~~~~~~~~~Dl~~~~~~~~~~~~~~~d~ 69 (311)
T 2p5y_A 1 MRVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKRE---NV--------PKGVPFFRVDLRDKEGVERAFREFRPTH 69 (311)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEECCCSSCCGG---GS--------CTTCCEECCCTTCHHHHHHHHHHHCCSE
T ss_pred CEEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCCcCchh---hc--------ccCeEEEECCCCCHHHHHHHHHhcCCCE
Confidence 479999999999999999999999999999885432211 11 1357789999999999999987657999
Q ss_pred EEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccc-cccCC-CCCCCccCCCCCCCCChhHHhHHH
Q 019795 85 VIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSA-TIYGQ-PEKIPCVEDFPYGAMNPYGRTKQW 162 (335)
Q Consensus 85 vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~-~vyg~-~~~~~~~e~~~~~~~~~Y~~sK~~ 162 (335)
|||+|+......+..++...+++|+.++.+++++|++.+++++|++||. ++||. ....+.+|+.+..|.+.|+.+|.+
T Consensus 70 vi~~a~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~~~~g~~~~~~~~~E~~~~~~~~~Y~~sK~~ 149 (311)
T 2p5y_A 70 VSHQAAQASVKVSVEDPVLDFEVNLLGGLNLLEACRQYGVEKLVFASTGGAIYGEVPEGERAEETWPPRPKSPYAASKAA 149 (311)
T ss_dssp EEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEHHHHHCCCCTTCCBCTTSCCCCCSHHHHHHHH
T ss_pred EEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCChhhcCCCCCCCCcCCCCCCCCCChHHHHHHH
Confidence 9999998655555677889999999999999999999888999999998 89987 555678899888889999999999
Q ss_pred HHHHHHHHHhhCCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHHH-HHHHhCCCCceeEe-----cccCCCCCCce
Q 019795 163 CEEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYI-QQVAVGRHPELNVY-----GQDYPTKDGSA 236 (335)
Q Consensus 163 ~E~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-----g~~~~~~~~~~ 236 (335)
+|++++.++.+. +++++++||+++||+.... .. ...+++.+ ..+..+. + +.++ | ++.+
T Consensus 150 ~e~~~~~~~~~~-~~~~~~lrp~~v~Gp~~~~------~~-~~~~~~~~~~~~~~~~-~-~~~~~~~~~~------~g~~ 213 (311)
T 2p5y_A 150 FEHYLSVYGQSY-GLKWVSLRYGNVYGPRQDP------HG-EAGVVAIFAERVLKGL-P-VTLYARKTPG------DEGC 213 (311)
T ss_dssp HHHHHHHHHHHH-CCCEEEEEECEEECTTCCS------SS-TTHHHHHHHHHHHHTC-C-EEEECSSSTT------SCCC
T ss_pred HHHHHHHHHHHc-CCCEEEEeeccccCcCCCC------CC-cCcHHHHHHHHHHcCC-C-cEEEecccCC------CCCe
Confidence 999999988777 9999999999999995321 00 12344543 4444444 3 5566 6 6788
Q ss_pred eeeeeeHhhhhc--------cCceEEecCCccccHHHHHHHHHHHhCCCCCceeCCCCCCccceeeccHHHHHHhcCCcc
Q 019795 237 VRDYIHVMDLAD--------GCIAYNLGNGKGISVLEMVAAFEKASGKKIPIKFCPRRVGDATAVYAATDKAHKELGWKP 308 (335)
Q Consensus 237 ~~~~v~~~D~~~--------~~~~~nv~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~d~~k~~~~Lg~~p 308 (335)
.++|+|++|+++ .+++||+++++.+|+.|+++.+.+.+|.+.++...+..+.+.....+|++|+++ |||+|
T Consensus 214 ~~~~i~v~Dva~a~~~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~d~~k~~~-lg~~p 292 (311)
T 2p5y_A 214 VRDYVYVGDVAEAHALALFSLEGIYNVGTGEGHTTREVLMAVAEAAGKAPEVQPAPPRPGDLERSVLSPLKLMA-HGWRP 292 (311)
T ss_dssp EECEEEHHHHHHHHHHHHHHCCEEEEESCSCCEEHHHHHHHHHHHHTCCCCEEEECCCTTCCSBCCBCCHHHHT-TTCCC
T ss_pred EEeeEEHHHHHHHHHHHHhCCCCEEEeCCCCCccHHHHHHHHHHHhCCCCCceeCCCCccchhhccCCHHHHHH-CCCCC
Confidence 999999999987 478999999999999999999999999888777666666666778899999999 99999
Q ss_pred ccCHHHHHHHHHHHHhcC
Q 019795 309 KYGIEDMCAHQWNWAKNN 326 (335)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~ 326 (335)
+++++++|+++++|++++
T Consensus 293 ~~~~~~~l~~~~~~~~~~ 310 (311)
T 2p5y_A 293 KVGFQEGIRLTVDHFRGA 310 (311)
T ss_dssp SSCHHHHHHHHHHHHHTC
T ss_pred CCCHHHHHHHHHHHHHhh
Confidence 999999999999999864
|
| >2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-46 Score=337.43 Aligned_cols=299 Identities=26% Similarity=0.432 Sum_probs=241.6
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCC--CeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcC
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGG--FKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQ 80 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~ 80 (335)
++|+|||||||||||++|+++|+++| ++|++++|...... .+.+..... ..++.++.+|++|.+++.+++.
T Consensus 2 ~~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~--~~~~~~~~~---~~~~~~~~~Dl~d~~~~~~~~~-- 74 (336)
T 2hun_A 2 HSMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSN--PANLKDLED---DPRYTFVKGDVADYELVKELVR-- 74 (336)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCC--GGGGTTTTT---CTTEEEEECCTTCHHHHHHHHH--
T ss_pred CCCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCc--hhHHhhhcc---CCceEEEEcCCCCHHHHHHHhh--
Confidence 45689999999999999999999986 89999998653211 111111110 2578899999999999999997
Q ss_pred CCCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCC-CEEEEeccccccCCCCCCCccCCCCCCCCChhHHh
Q 019795 81 KFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNC-KKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRT 159 (335)
Q Consensus 81 ~~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~-~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~Y~~s 159 (335)
++|+|||+|+......+..+++..+++|+.++.+++++|.+.+. ++||++||.++||.....+++|+.+..|.+.|+.+
T Consensus 75 ~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~E~~~~~~~~~Y~~s 154 (336)
T 2hun_A 75 KVDGVVHLAAESHVDRSISSPEIFLHSNVIGTYTLLESIRRENPEVRFVHVSTDEVYGDILKGSFTENDRLMPSSPYSAT 154 (336)
T ss_dssp TCSEEEECCCCCCHHHHHHCTHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEEGGGGCCCSSSCBCTTBCCCCCSHHHHH
T ss_pred CCCEEEECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEeccHHHHCCCCCCCcCCCCCCCCCCccHHH
Confidence 89999999998665455677889999999999999999998864 79999999999998766789999999999999999
Q ss_pred HHHHHHHHHHHHhhCCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHHH-HHHHhCCCCceeEecccCCCCCCceee
Q 019795 160 KQWCEEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYI-QQVAVGRHPELNVYGQDYPTKDGSAVR 238 (335)
Q Consensus 160 K~~~E~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~ 238 (335)
|..+|.+++.++.++ +++++++||++|||+... ...+.+.+ ..+..+. + ++++| ++.+.+
T Consensus 155 K~~~e~~~~~~~~~~-~~~~~ilrp~~v~g~~~~----------~~~~~~~~~~~~~~~~-~-~~~~~------~~~~~~ 215 (336)
T 2hun_A 155 KAASDMLVLGWTRTY-NLNASITRCTNNYGPYQF----------PEKLIPKTIIRASLGL-K-IPIYG------TGKNVR 215 (336)
T ss_dssp HHHHHHHHHHHHHHT-TCEEEEEEECEEESTTCC----------TTSHHHHHHHHHHTTC-C-EEEET------C---CE
T ss_pred HHHHHHHHHHHHHHh-CCCEEEEeeeeeeCcCCC----------cCchHHHHHHHHHcCC-C-ceEeC------CCCcee
Confidence 999999999998887 999999999999998532 12344544 4444443 4 67777 788899
Q ss_pred eeeeHhhhhc----------cCceEEecCCccccHHHHHHHHHHHhCCCCC-ceeCCCCCCccceeeccHHHHHHhcCCc
Q 019795 239 DYIHVMDLAD----------GCIAYNLGNGKGISVLEMVAAFEKASGKKIP-IKFCPRRVGDATAVYAATDKAHKELGWK 307 (335)
Q Consensus 239 ~~v~~~D~~~----------~~~~~nv~~~~~~s~~el~~~i~~~~g~~~~-~~~~~~~~~~~~~~~~d~~k~~~~Lg~~ 307 (335)
+|+|++|+++ .+++||+++++.+|+.|+++.+.+.+|.+.+ +...+..+.......+|++|+++.|||+
T Consensus 216 ~~i~v~Dva~~~~~~~~~~~~g~~~~v~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~ 295 (336)
T 2hun_A 216 DWLYVEDHVRAIELVLLKGESREIYNISAGEEKTNLEVVKIILRLMGKGEELIELVEDRPGHDLRYSLDSWKITRDLKWR 295 (336)
T ss_dssp EEEEHHHHHHHHHHHHHHCCTTCEEEECCSCEECHHHHHHHHHHHTTCCSTTEEEECCCTTCCCCCCBCCHHHHHHHCCC
T ss_pred eeEEHHHHHHHHHHHHhCCCCCCEEEeCCCCcccHHHHHHHHHHHhCCCcccccccCCCCCchhhhcCCHHHHHHHhCCC
Confidence 9999999987 4789999999999999999999999998754 3333333333445678999999999999
Q ss_pred cccCHHHHHHHHHHHHhcCC
Q 019795 308 PKYGIEDMCAHQWNWAKNNP 327 (335)
Q Consensus 308 p~~~~~~~~~~~~~~~~~~~ 327 (335)
|+++++++|+++++|++++.
T Consensus 296 p~~~~~~~l~~~~~~~~~~~ 315 (336)
T 2hun_A 296 PKYTFDEGIKKTIDWYLKNE 315 (336)
T ss_dssp CSSCHHHHHHHHHHHHHHTH
T ss_pred CCCCHHHHHHHHHHHHHhCc
Confidence 99999999999999998864
|
| >4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.7e-47 Score=338.49 Aligned_cols=291 Identities=19% Similarity=0.209 Sum_probs=242.9
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCC
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQK 81 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~ 81 (335)
|+||+|||||||||||++|+++|+++|+ +.... ...+.++.+|++|.+.+.++++..+
T Consensus 4 ~~~~~vlVtGatG~iG~~l~~~L~~~g~------~~~~~----------------~~~~~~~~~D~~d~~~~~~~~~~~~ 61 (319)
T 4b8w_A 4 FQSMRILVTGGSGLVGKAIQKVVADGAG------LPGED----------------WVFVSSKDADLTDTAQTRALFEKVQ 61 (319)
T ss_dssp CCCCEEEEETCSSHHHHHHHHHHHTTTC------CTTCE----------------EEECCTTTCCTTSHHHHHHHHHHSC
T ss_pred ccCCeEEEECCCcHHHHHHHHHHHhcCC------ccccc----------------ccccCceecccCCHHHHHHHHhhcC
Confidence 6789999999999999999999999998 11000 0345566899999999999999666
Q ss_pred CCEEEEcccccc-hhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccCCCCCCCccCCC----CCCCCC-h
Q 019795 82 FEAVIHFGALKA-VAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQPEKIPCVEDF----PYGAMN-P 155 (335)
Q Consensus 82 ~d~vi~~a~~~~-~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~----~~~~~~-~ 155 (335)
+|+|||+|+... ...+..++...+++|+.++.+++++|++.++++|||+||.++||.....+++|++ +..|.+ .
T Consensus 62 ~d~Vih~A~~~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~ 141 (319)
T 4b8w_A 62 PTHVIHLAAMVGGLFRNIKYNLDFWRKNVHMNDNVLHSAFEVGARKVVSCLSTCIFPDKTTYPIDETMIHNGPPHNSNFG 141 (319)
T ss_dssp CSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCGGGSCSSCCSSBCGGGGGBSCCCSSSHH
T ss_pred CCEEEECceecccccccccCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEEcchhhcCCCCCCCccccccccCCCCCCcch
Confidence 999999999853 3345678889999999999999999999999999999999999988888999987 666666 5
Q ss_pred hHHhHHHHHHHHHHHHhhCCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHH----HhCCCCceeEecccCCC
Q 019795 156 YGRTKQWCEEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQV----AVGRHPELNVYGQDYPT 231 (335)
Q Consensus 156 Y~~sK~~~E~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~----~~~~~~~~~~~g~~~~~ 231 (335)
|+.+|.++|++++.+.++. +++++++||+++||+..... .....+++.+... +..+.+ +.++|
T Consensus 142 Y~~sK~~~E~~~~~~~~~~-~~~~~ilRp~~v~Gp~~~~~------~~~~~~~~~~~~~~~~~~~~~~~-~~~~~----- 208 (319)
T 4b8w_A 142 YSYAKRMIDVQNRAYFQQY-GCTFTAVIPTNVFGPHDNFN------IEDGHVLPGLIHKVHLAKSSGSA-LTVWG----- 208 (319)
T ss_dssp HHHHHHHHHHHHHHHHHHH-CCEEEEEEECEEECTTCCCC------TTTSCHHHHHHHHHHHHHHHTCC-EEEES-----
T ss_pred HHHHHHHHHHHHHHHHHhh-CCCEEEEeeccccCCCCCCC------CccccccHHHHHHHHHHhccCCc-eEEeC-----
Confidence 9999999999999988877 99999999999999964311 1123344543332 333334 77888
Q ss_pred CCCceeeeeeeHhhhhc------------cCceEEecCCccccHHHHHHHHHHHhCCCCCceeCCCCCCccceeeccHHH
Q 019795 232 KDGSAVRDYIHVMDLAD------------GCIAYNLGNGKGISVLEMVAAFEKASGKKIPIKFCPRRVGDATAVYAATDK 299 (335)
Q Consensus 232 ~~~~~~~~~v~~~D~~~------------~~~~~nv~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~d~~k 299 (335)
++.+.++|+|++|+++ .+++||+++++.+|+.|+++.+.+.+|.+.++...+....+.....+|++|
T Consensus 209 -~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~d~~k 287 (319)
T 4b8w_A 209 -TGNPRRQFIYSLDLAQLFIWVLREYNEVEPIILSVGEEDEVSIKEAAEAVVEAMDFHGEVTFDTTKSDGQFKKTASNSK 287 (319)
T ss_dssp -CSCCEECEEEHHHHHHHHHHHHHHCCCSSCEEECCCGGGCEEHHHHHHHHHHHTTCCSCEEEETTSCCCCSCCCBCCHH
T ss_pred -CCCeeEEEEeHHHHHHHHHHHHhccccCCceEEEecCCCceeHHHHHHHHHHHhCCCCcEEeCCCCCcCcccccCCHHH
Confidence 7899999999999997 266999999999999999999999999988887777666666777899999
Q ss_pred HHHhcCCccccCHHHHHHHHHHHHhcCCC
Q 019795 300 AHKELGWKPKYGIEDMCAHQWNWAKNNPM 328 (335)
Q Consensus 300 ~~~~Lg~~p~~~~~~~~~~~~~~~~~~~~ 328 (335)
+++.|||.|.++++++|+++++|++++..
T Consensus 288 ~~~~lg~~p~~~~~~~l~~~~~~~~~~~~ 316 (319)
T 4b8w_A 288 LRTYLPDFRFTPFKQAVKETCAWFTDNYE 316 (319)
T ss_dssp HHHHCTTCCCCCHHHHHHHHHHHHHHSCS
T ss_pred HHHhcCCCCCCCHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999998754
|
| >1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-46 Score=338.79 Aligned_cols=300 Identities=25% Similarity=0.421 Sum_probs=244.3
Q ss_pred CCCCCeEEEEcCCChhhHHHHHHHHhC--CCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHh
Q 019795 1 MASEKNILVTGGAGFIGTHCALQLLQG--GFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFS 78 (335)
Q Consensus 1 ~~~~~~vlItGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~ 78 (335)
|..||+|||||||||||++|+++|+++ |++|++++|....... ..+.... ..++.++.+|++|.+++.++++
T Consensus 1 Ms~m~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~--~~~~~~~----~~~~~~~~~Dl~d~~~~~~~~~ 74 (348)
T 1oc2_A 1 MSQFKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNK--ANLEAIL----GDRVELVVGDIADAELVDKLAA 74 (348)
T ss_dssp --CCSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCG--GGTGGGC----SSSEEEEECCTTCHHHHHHHHT
T ss_pred CCcCcEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCCh--hHHhhhc----cCCeEEEECCCCCHHHHHHHhh
Confidence 555789999999999999999999998 8999999996532111 1111111 1578899999999999999998
Q ss_pred cCCCCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccCCCCC------------CCccC
Q 019795 79 SQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQPEK------------IPCVE 146 (335)
Q Consensus 79 ~~~~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~------------~~~~e 146 (335)
++|+|||+|+......+..+++..+++|+.++.+++++|.+.++ +||++||.++||.... .+++|
T Consensus 75 --~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~-~~v~~SS~~vyg~~~~~~~~~~~~~~~~~~~~E 151 (348)
T 1oc2_A 75 --KADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDI-RFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTA 151 (348)
T ss_dssp --TCSEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCT
T ss_pred --cCCEEEECCcccCccchhhCHHHHHHHHHHHHHHHHHHHHHhCC-eEEEecccceeCCCcccccccccccccCCCcCC
Confidence 77999999998765555667889999999999999999999887 9999999999986532 67899
Q ss_pred CCCCCCCChhHHhHHHHHHHHHHHHhhCCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHH-HHHHHHhCCCCceeEe
Q 019795 147 DFPYGAMNPYGRTKQWCEEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMP-YIQQVAVGRHPELNVY 225 (335)
Q Consensus 147 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 225 (335)
+.+..|.+.|+.+|..+|.+++.++.++ +++++++||++|||+... ...+.+ ++.....+.. +.++
T Consensus 152 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~-gi~~~ilrp~~v~G~~~~----------~~~~~~~~~~~~~~~~~--~~~~ 218 (348)
T 1oc2_A 152 ETNYNPSSPYSSTKAASDLIVKAWVRSF-GVKATISNCSNNYGPYQH----------IEKFIPRQITNILAGIK--PKLY 218 (348)
T ss_dssp TSCCCCCSHHHHHHHHHHHHHHHHHHHH-CCEEEEEEECCEESTTCC----------TTSHHHHHHHHHHHTCC--CEEE
T ss_pred CCCCCCCCccHHHHHHHHHHHHHHHHHh-CCCEEEEeeceeeCCCCC----------ccchHHHHHHHHHcCCC--ceEe
Confidence 9898899999999999999999988877 999999999999998532 123444 3444555543 5666
Q ss_pred cccCCCCCCceeeeeeeHhhhhc----------cCceEEecCCccccHHHHHHHHHHHhCCCCC-ceeCCCCCCccceee
Q 019795 226 GQDYPTKDGSAVRDYIHVMDLAD----------GCIAYNLGNGKGISVLEMVAAFEKASGKKIP-IKFCPRRVGDATAVY 294 (335)
Q Consensus 226 g~~~~~~~~~~~~~~v~~~D~~~----------~~~~~nv~~~~~~s~~el~~~i~~~~g~~~~-~~~~~~~~~~~~~~~ 294 (335)
| ++.+.++|+|++|+++ .+++||+++++.+|+.|+++.+.+.+|.+.+ +.+.+..+.......
T Consensus 219 ~------~~~~~~~~i~v~Dva~~~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~ 292 (348)
T 1oc2_A 219 G------EGKNVRDWIHTNDHSTGVWAILTKGRMGETYLIGADGEKNNKEVLELILEKMGQPKDAYDHVTDRAGHDLRYA 292 (348)
T ss_dssp T------TSCCEEECEEHHHHHHHHHHHHHHCCTTCEEEECCSCEEEHHHHHHHHHHHTTCCTTCSEEECCCTTCCCBCC
T ss_pred c------CCCceEeeEEHHHHHHHHHHHhhCCCCCCeEEeCCCCCCCHHHHHHHHHHHhCCCccccccCCCCCCcccccc
Confidence 7 7888999999999997 4789999999999999999999999998753 333333333445667
Q ss_pred ccHHHHHHhcCCccccC-HHHHHHHHHHHHhcCCC
Q 019795 295 AATDKAHKELGWKPKYG-IEDMCAHQWNWAKNNPM 328 (335)
Q Consensus 295 ~d~~k~~~~Lg~~p~~~-~~~~~~~~~~~~~~~~~ 328 (335)
+|++|+++.|||+|+++ ++++|+++++|++++..
T Consensus 293 ~d~~k~~~~lG~~p~~~~~~~~l~~~~~~~~~~~~ 327 (348)
T 1oc2_A 293 IDASKLRDELGWTPQFTDFSEGLEETIQWYTDNQD 327 (348)
T ss_dssp BCCHHHHHHHCCCCSCCCHHHHHHHHHHHHHHTHH
T ss_pred cCHHHHHHHcCCCCCCCcHHHHHHHHHHHHHHhhh
Confidence 99999999999999998 99999999999998643
|
| >1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-46 Score=338.07 Aligned_cols=305 Identities=24% Similarity=0.450 Sum_probs=245.8
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCC-chhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCC
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNS-VPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKF 82 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~ 82 (335)
||+|||||||||||++|+++|+++|++|++++|.... .......+.. ..++.++.+|++|.+++.++++..++
T Consensus 1 M~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~------~~~~~~~~~Dl~d~~~~~~~~~~~~~ 74 (347)
T 1orr_A 1 MAKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSS------LGNFEFVHGDIRNKNDVTRLITKYMP 74 (347)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHT------TCCCEEEECCTTCHHHHHHHHHHHCC
T ss_pred CcEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhhhcc------CCceEEEEcCCCCHHHHHHHHhccCC
Confidence 4689999999999999999999999999999986422 2222222221 13588999999999999999984349
Q ss_pred CEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCC-EEEEeccccccCCCCCC----------------Ccc
Q 019795 83 EAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCK-KLVFSSSATIYGQPEKI----------------PCV 145 (335)
Q Consensus 83 d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~-~~v~~Ss~~vyg~~~~~----------------~~~ 145 (335)
|+|||+|+......+..+++..+++|+.++.+++++|++.+++ +||++||.++||..... +++
T Consensus 75 d~vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~iv~~SS~~v~g~~~~~~~~e~~~~~~~~~~~~~~~ 154 (347)
T 1orr_A 75 DSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYD 154 (347)
T ss_dssp SEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCBC
T ss_pred CEEEECCcccChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEeccHHHhCCCCcCCcccccccccccccccCcc
Confidence 9999999986655556678899999999999999999998875 99999999999865433 256
Q ss_pred CCCCCCCCChhHHhHHHHHHHHHHHHhhCCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHH-HHHHHHhCCC----C
Q 019795 146 EDFPYGAMNPYGRTKQWCEEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMP-YIQQVAVGRH----P 220 (335)
Q Consensus 146 e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~----~ 220 (335)
|+.+..|.+.|+.+|..+|++++.++.++ +++++++||++|||+..... ....+++ ++...+.+.. +
T Consensus 155 e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-gi~~~ilrp~~v~g~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~ 226 (347)
T 1orr_A 155 ESTQLDFHSPYGCSKGAADQYMLDYARIF-GLNTVVFRHSSMYGGRQFAT-------YDQGWVGWFCQKAVEIKNGINKP 226 (347)
T ss_dssp TTSCCCCCHHHHHHHHHHHHHHHHHHHHH-CCEEEEEEECCEECTTCCCB-------TTBCHHHHHHHHHHHHHTTCCCC
T ss_pred ccCCCCCCCchHHHHHHHHHHHHHHHHHh-CCcEEEEccCceeCcCCCCC-------CcCcHHHHHHHHHHhCcccCCCC
Confidence 77777788899999999999999988877 99999999999999853210 0122333 4445544442 4
Q ss_pred ceeEecccCCCCCCceeeeeeeHhhhhc------------cCceEEecCCc--cccHHHHHHHHHHHhCCCCCceeCCCC
Q 019795 221 ELNVYGQDYPTKDGSAVRDYIHVMDLAD------------GCIAYNLGNGK--GISVLEMVAAFEKASGKKIPIKFCPRR 286 (335)
Q Consensus 221 ~~~~~g~~~~~~~~~~~~~~v~~~D~~~------------~~~~~nv~~~~--~~s~~el~~~i~~~~g~~~~~~~~~~~ 286 (335)
+.++| ++.+.++|+|++|+++ .+++||++++. .+|+.|+++.+.+.+|.+.++...+.+
T Consensus 227 -~~~~g------~g~~~~~~i~v~Dva~a~~~~~~~~~~~~g~~~~v~~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~ 299 (347)
T 1orr_A 227 -FTISG------NGKQVRDVLHAEDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLLEDYCNIDMRFTNLPVR 299 (347)
T ss_dssp -EEEES------SSCCEEECEEHHHHHHHHHHHHHTHHHHTTCEEEESSCGGGEEEHHHHHHHHHHHHTCCCCEEEECCC
T ss_pred -eEEec------CCcceEeeEEHHHHHHHHHHHHhccccCCCCEEEeCCCCCCCccHHHHHHHHHHHhCCCCCceeCCCC
Confidence 66777 7889999999999987 36799999886 499999999999999988777766665
Q ss_pred CCccceeeccHHHHHHhcCCccccCHHHHHHHHHHHHhcCCCC
Q 019795 287 VGDATAVYAATDKAHKELGWKPKYGIEDMCAHQWNWAKNNPMG 329 (335)
Q Consensus 287 ~~~~~~~~~d~~k~~~~Lg~~p~~~~~~~~~~~~~~~~~~~~~ 329 (335)
+.+.....+|++|+++.|||+|+++++++|+++++|+++++..
T Consensus 300 ~~~~~~~~~d~~k~~~~lG~~p~~~~~e~l~~~~~~~~~~~~~ 342 (347)
T 1orr_A 300 ESDQRVFVADIKKITNAIDWSPKVSAKDGVQKMYDWTSSILEH 342 (347)
T ss_dssp SSCCSEECBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHC---
T ss_pred CCCcceeecCHHHHHHHHCCCccCCHHHHHHHHHHHHHHHHHh
Confidence 5666678899999999999999999999999999999998763
|
| >4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-46 Score=341.93 Aligned_cols=295 Identities=22% Similarity=0.292 Sum_probs=242.1
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCC
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKF 82 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~ 82 (335)
++|+|||||||||||++|++.|+++|++|++++|+... .++.++.+|++|.+++.++++ ++
T Consensus 18 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-----------------~~~~~~~~Dl~d~~~~~~~~~--~~ 78 (347)
T 4id9_A 18 GSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG-----------------TGGEEVVGSLEDGQALSDAIM--GV 78 (347)
T ss_dssp ---CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS-----------------SCCSEEESCTTCHHHHHHHHT--TC
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC-----------------CCccEEecCcCCHHHHHHHHh--CC
Confidence 56899999999999999999999999999999997543 357889999999999999998 89
Q ss_pred CEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccCC--CCCCCccCCCCCCCCChhHHhH
Q 019795 83 EAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQ--PEKIPCVEDFPYGAMNPYGRTK 160 (335)
Q Consensus 83 d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~--~~~~~~~e~~~~~~~~~Y~~sK 160 (335)
|+|||+|+...... ...+..+++|+.++.+++++|++.++++|||+||.++||. ....+++|+.+..|.+.|+.+|
T Consensus 79 d~vih~A~~~~~~~--~~~~~~~~~nv~~~~~ll~a~~~~~~~~~V~~SS~~vyg~~~~~~~~~~E~~~~~~~~~Y~~sK 156 (347)
T 4id9_A 79 SAVLHLGAFMSWAP--ADRDRMFAVNVEGTRRLLDAASAAGVRRFVFASSGEVYPENRPEFLPVTEDHPLCPNSPYGLTK 156 (347)
T ss_dssp SEEEECCCCCCSSG--GGHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGTTTTSCSSSSBCTTSCCCCCSHHHHHH
T ss_pred CEEEECCcccCcch--hhHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHHHhCCCCCCCCCcCCCCCCCCCChHHHHH
Confidence 99999999854322 2337899999999999999999999999999999999998 5667899999999999999999
Q ss_pred HHHHHHHHHHHhhCCCCeEEEEeccccc-------------CCCCCCCCC-CCCCCCCCChHHHHHHHHhCCCCceeEec
Q 019795 161 QWCEEIAFDVQKADPEWRIILLRYFNPV-------------GAHESGKLG-EDPKGIPNNLMPYIQQVAVGRHPELNVYG 226 (335)
Q Consensus 161 ~~~E~~~~~~~~~~~~~~~~~lR~~~v~-------------G~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 226 (335)
.++|++++.+.++. +++++++||+++| |+.....-. .........+++.+......+.+ +.++|
T Consensus 157 ~~~E~~~~~~~~~~-~~~~~ilRp~~v~~~~~~~~~~~~~~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g 234 (347)
T 4id9_A 157 LLGEELVRFHQRSG-AMETVILRFSHTQDATELLDEDSFFSGPRFFLRPRIHQQQNFGNAAIAELLQSRDIGEP-SHILA 234 (347)
T ss_dssp HHHHHHHHHHHHHS-SSEEEEEEECEEECGGGTTCTTSSSHHHHHBHHHHHHHHHHHTCHHHHHHHHHHCCSSC-CEEEE
T ss_pred HHHHHHHHHHHHhc-CCceEEEccceEeecccccccccccCCCCcccccccccccccchhHHHHHHHHHHcCCC-eEEeC
Confidence 99999999998887 9999999999999 553110000 00000002345545544444444 56777
Q ss_pred ccCCCCCCceeeee----eeHhhhhc-----------cCceEEecCCccccHHHHHHHHHHHhCCCCCceeCCCCCCccc
Q 019795 227 QDYPTKDGSAVRDY----IHVMDLAD-----------GCIAYNLGNGKGISVLEMVAAFEKASGKKIPIKFCPRRVGDAT 291 (335)
Q Consensus 227 ~~~~~~~~~~~~~~----v~~~D~~~-----------~~~~~nv~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~ 291 (335)
++.+.++| +|++|+|+ .+++||+++++.+|+.|+++.+.+.+|.+.++...+..+.
T Consensus 235 ------~~~~~~~~~~~~i~v~Dva~ai~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~p~~~~--- 305 (347)
T 4id9_A 235 ------RNENGRPFRMHITDTRDMVAGILLALDHPEAAGGTFNLGADEPADFAALLPKIAALTGLPIVTVDFPGDGV--- 305 (347)
T ss_dssp ------ECTTCCBCEECEEEHHHHHHHHHHHHHCGGGTTEEEEESCSSCEEHHHHHHHHHHHHCCCEEEEECSSCCC---
T ss_pred ------CCCcccCCccCcEeHHHHHHHHHHHhcCcccCCCeEEECCCCcccHHHHHHHHHHHhCCCCceeeCCCccc---
Confidence 67888899 99999997 3789999999999999999999999998877765554433
Q ss_pred eeeccHHHHHHhcCCccccCHHHHHHHHHHHHhcCCCC
Q 019795 292 AVYAATDKAHKELGWKPKYGIEDMCAHQWNWAKNNPMG 329 (335)
Q Consensus 292 ~~~~d~~k~~~~Lg~~p~~~~~~~~~~~~~~~~~~~~~ 329 (335)
...+|++|+++.|||+|+++++++|+++++|++++...
T Consensus 306 ~~~~d~~k~~~~lG~~p~~~~~~~l~~~~~~~~~~~~~ 343 (347)
T 4id9_A 306 YYHTSNERIRNTLGFEAEWTMDRMLEEAATARRQRLAK 343 (347)
T ss_dssp BCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCC-
T ss_pred ccccCHHHHHHHhCCCCCCCHHHHHHHHHHHHHhhhhc
Confidence 77899999999999999999999999999999987654
|
| >1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.1e-46 Score=335.23 Aligned_cols=297 Identities=26% Similarity=0.447 Sum_probs=244.0
Q ss_pred CeEEEEcCCChhhHHHHHHHHhC---C---CeEEEEecCCCC-chhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHH
Q 019795 5 KNILVTGGAGFIGTHCALQLLQG---G---FKVVLIDNLHNS-VPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLF 77 (335)
Q Consensus 5 ~~vlItGatG~iG~~l~~~L~~~---g---~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~ 77 (335)
|+|||||||||||++|+++|+++ | ++|++++|.... .......+. . ..++.++.+|++|.+++.+++
T Consensus 1 M~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~~~~~---~---~~~~~~~~~Dl~d~~~~~~~~ 74 (337)
T 1r6d_A 1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVD---A---DPRLRFVHGDIRDAGLLAREL 74 (337)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGT---T---CTTEEEEECCTTCHHHHHHHT
T ss_pred CeEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhhhhcc---c---CCCeEEEEcCCCCHHHHHHHh
Confidence 47999999999999999999997 8 999999986532 111111111 0 157889999999999999999
Q ss_pred hcCCCCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccCCCCCCCccCCCCCCCCChhH
Q 019795 78 SSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYG 157 (335)
Q Consensus 78 ~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~Y~ 157 (335)
. ++|+|||+|+......+..+++..+++|+.++.+++++|++.++++||++||.++||.....+++|+.+..|.+.|+
T Consensus 75 ~--~~d~Vih~A~~~~~~~~~~~~~~~~~~Nv~~~~~l~~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~Y~ 152 (337)
T 1r6d_A 75 R--GVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTNQVYGSIDSGSWTESSPLEPNSPYA 152 (337)
T ss_dssp T--TCCEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGCCCSSSCBCTTSCCCCCSHHH
T ss_pred c--CCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEecchHHhCCCCCCCCCCCCCCCCCCchH
Confidence 6 89999999998665455667889999999999999999999998999999999999987667889999999999999
Q ss_pred HhHHHHHHHHHHHHhhCCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHHH-HHHHhCCCCceeEecccCCCCCCce
Q 019795 158 RTKQWCEEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYI-QQVAVGRHPELNVYGQDYPTKDGSA 236 (335)
Q Consensus 158 ~sK~~~E~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~ 236 (335)
.+|..+|++++.+..++ +++++++||+++||+... ...+++.+ .....+. + +.++| ++.+
T Consensus 153 ~sK~~~e~~~~~~~~~~-g~~~~ilrp~~v~G~~~~----------~~~~~~~~~~~~~~~~-~-~~~~~------~~~~ 213 (337)
T 1r6d_A 153 ASKAGSDLVARAYHRTY-GLDVRITRCCNNYGPYQH----------PEKLIPLFVTNLLDGG-T-LPLYG------DGAN 213 (337)
T ss_dssp HHHHHHHHHHHHHHHHH-CCCEEEEEECEEECTTCC----------TTSHHHHHHHHHHTTC-C-EEEET------TSCC
T ss_pred HHHHHHHHHHHHHHHHH-CCCEEEEEeeeeECCCCC----------CCChHHHHHHHHhcCC-C-cEEeC------CCCe
Confidence 99999999999988877 899999999999998532 12344543 4444443 4 66777 7888
Q ss_pred eeeeeeHhhhhc----------cCceEEecCCccccHHHHHHHHHHHhCCCCC-ceeCCCCCCccceeeccHHHHHHhcC
Q 019795 237 VRDYIHVMDLAD----------GCIAYNLGNGKGISVLEMVAAFEKASGKKIP-IKFCPRRVGDATAVYAATDKAHKELG 305 (335)
Q Consensus 237 ~~~~v~~~D~~~----------~~~~~nv~~~~~~s~~el~~~i~~~~g~~~~-~~~~~~~~~~~~~~~~d~~k~~~~Lg 305 (335)
.++|+|++|+++ .+++||+++++.+|+.|+++.+.+.+|.+.+ +.+.+..+.......+|++|+++.||
T Consensus 214 ~~~~i~v~Dva~a~~~~~~~~~~g~~~~v~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG 293 (337)
T 1r6d_A 214 VREWVHTDDHCRGIALVLAGGRAGEIYHIGGGLELTNRELTGILLDSLGADWSSVRKVADRKGHDLRYSLDGGKIERELG 293 (337)
T ss_dssp EEEEEEHHHHHHHHHHHHHHCCTTCEEEECCCCEEEHHHHHHHHHHHHTCCGGGEEEECCCTTCCCBCCBCCHHHHHHHC
T ss_pred eEeeEeHHHHHHHHHHHHhCCCCCCEEEeCCCCCccHHHHHHHHHHHhCCCcccceecCCCCCCcceeecCHHHHHHHcC
Confidence 999999999987 4679999999999999999999999998754 33333333333456789999999999
Q ss_pred CccccCHHHHHHHHHHHHhcCCC
Q 019795 306 WKPKYGIEDMCAHQWNWAKNNPM 328 (335)
Q Consensus 306 ~~p~~~~~~~~~~~~~~~~~~~~ 328 (335)
|+|+++++++|+++++|++++..
T Consensus 294 ~~p~~~~~e~l~~~~~~~~~~~~ 316 (337)
T 1r6d_A 294 YRPQVSFADGLARTVRWYRENRG 316 (337)
T ss_dssp CCCCSCHHHHHHHHHHHHHHCHH
T ss_pred CCCCCCHHHHHHHHHHHHHhchh
Confidence 99999999999999999998754
|
| >3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-46 Score=341.84 Aligned_cols=299 Identities=22% Similarity=0.320 Sum_probs=238.6
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHh--CCCeEEEEecCCCCchhhH------HhhhhhcCCccccceeEEEccCCCHHHHH
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQ--GGFKVVLIDNLHNSVPEAV------DRVKDLAGPELAKKLEFHVGDLRNKDDLD 74 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~--~g~~V~~~~r~~~~~~~~~------~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~ 74 (335)
++|+|||||||||||++|+++|++ .|++|++++|+........ ...... ...++.++.+|++|.+++.
T Consensus 9 ~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~Dl~d~~~~~ 84 (362)
T 3sxp_A 9 ENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNL----IGFKGEVIAADINNPLDLR 84 (362)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGG----TTCCSEEEECCTTCHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhc----cccCceEEECCCCCHHHHH
Confidence 468999999999999999999999 9999999999765211100 001111 1246789999999999999
Q ss_pred HH-HhcCCCCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccCCCCCCCccCCCCCCCC
Q 019795 75 KL-FSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQPEKIPCVEDFPYGAM 153 (335)
Q Consensus 75 ~~-~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~ 153 (335)
++ .. ++|+|||+|+.... +..+++..+++|+.++.+++++|++.+++ ||++||+++||.... +++|+++..|.
T Consensus 85 ~~~~~--~~D~vih~A~~~~~--~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~-~V~~SS~~vyg~~~~-~~~E~~~~~p~ 158 (362)
T 3sxp_A 85 RLEKL--HFDYLFHQAAVSDT--TMLNQELVMKTNYQAFLNLLEIARSKKAK-VIYASSAGVYGNTKA-PNVVGKNESPE 158 (362)
T ss_dssp HHTTS--CCSEEEECCCCCGG--GCCCHHHHHHHHTHHHHHHHHHHHHTTCE-EEEEEEGGGGCSCCS-SBCTTSCCCCS
T ss_pred Hhhcc--CCCEEEECCccCCc--cccCHHHHHHHHHHHHHHHHHHHHHcCCc-EEEeCcHHHhCCCCC-CCCCCCCCCCC
Confidence 98 44 89999999997543 56788899999999999999999999876 999999999998766 99999999999
Q ss_pred ChhHHhHHHHHHHHHHHHhhCCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHHHhCCCCceeEecccCCCCC
Q 019795 154 NPYGRTKQWCEEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKD 233 (335)
Q Consensus 154 ~~Y~~sK~~~E~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 233 (335)
+.|+.+|.++|.+++.+..+ ++++++||++||||..... .....+++.+......+.+ +.++| +
T Consensus 159 ~~Y~~sK~~~E~~~~~~~~~---~~~~~lR~~~v~Gp~~~~~------~~~~~~~~~~~~~~~~~~~-~~~~~------~ 222 (362)
T 3sxp_A 159 NVYGFSKLCMDEFVLSHSND---NVQVGLRYFNVYGPREFYK------EKTASMVLQLALGAMAFKE-VKLFE------F 222 (362)
T ss_dssp SHHHHHHHHHHHHHHHTTTT---SCEEEEEECSEESTTCGGG------GGGSCHHHHHHHHHHTTSE-EECSG------G
T ss_pred ChhHHHHHHHHHHHHHHhcc---CCEEEEEeCceeCcCCCCC------CcchhHHHHHHHHHHhCCC-eEEEC------C
Confidence 99999999999999987653 7899999999999964311 0012355544444444433 56667 6
Q ss_pred CceeeeeeeHhhhhc---------cCceEEecCCccccHHHHHHHHHHHhCCCCCceeCCCC-CCccceeeccHHHHHHh
Q 019795 234 GSAVRDYIHVMDLAD---------GCIAYNLGNGKGISVLEMVAAFEKASGKKIPIKFCPRR-VGDATAVYAATDKAHKE 303 (335)
Q Consensus 234 ~~~~~~~v~~~D~~~---------~~~~~nv~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~-~~~~~~~~~d~~k~~~~ 303 (335)
+.+.++|+|++|+|+ ..++||+++++.+|+.|+++.+.+.+| +.++...+.+ ........+|++|+++.
T Consensus 223 g~~~~~~i~v~Dva~ai~~~~~~~~~g~~~i~~~~~~s~~e~~~~i~~~~g-~~~~~~~~~~~~~~~~~~~~d~~k~~~~ 301 (362)
T 3sxp_A 223 GEQLRDFVYIEDVIQANVKAMKAQKSGVYNVGYSQARSYNEIVSILKEHLG-DFKVTYIKNPYAFFQKHTQAHIEPTILD 301 (362)
T ss_dssp GCCEEECEEHHHHHHHHHHHTTCSSCEEEEESCSCEEEHHHHHHHHHHHHC-CCEEECCC-------CCCCBCCHHHHHH
T ss_pred CCeEEccEEHHHHHHHHHHHHhcCCCCEEEeCCCCCccHHHHHHHHHHHcC-CCceEECCCCCcCcccceecCHHHHHHH
Confidence 788999999999998 234999999999999999999999999 7777666655 55667789999999999
Q ss_pred cCCccccCHHHHHHHHHHHHhcCCC
Q 019795 304 LGWKPKYGIEDMCAHQWNWAKNNPM 328 (335)
Q Consensus 304 Lg~~p~~~~~~~~~~~~~~~~~~~~ 328 (335)
|||+|+++++++|+++++|++++..
T Consensus 302 lG~~p~~~l~e~l~~~~~~~~~~~~ 326 (362)
T 3sxp_A 302 LDYTPLYDLESGIKDYLPHIHAIFK 326 (362)
T ss_dssp HCCCCCCCHHHHHHHHHHHHTCC--
T ss_pred hCCCCCCCHHHHHHHHHHHHHHHhh
Confidence 9999999999999999999998654
|
| >1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-46 Score=336.53 Aligned_cols=306 Identities=18% Similarity=0.260 Sum_probs=245.9
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCC
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKF 82 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~ 82 (335)
++|+|||||||||||++|+++|+++|++|++++|+...... ..+.... ...++.++.+|++|.+++.++++..++
T Consensus 13 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--~~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 87 (335)
T 1rpn_A 13 MTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTR--WRLRELG---IEGDIQYEDGDMADACSVQRAVIKAQP 87 (335)
T ss_dssp --CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCC--HHHHHTT---CGGGEEEEECCTTCHHHHHHHHHHHCC
T ss_pred cCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccc--cchhhcc---ccCceEEEECCCCCHHHHHHHHHHcCC
Confidence 57899999999999999999999999999999997654211 1111110 115788999999999999999985568
Q ss_pred CEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCC-CEEEEeccccccCCCCCCCccCCCCCCCCChhHHhHH
Q 019795 83 EAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNC-KKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQ 161 (335)
Q Consensus 83 d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~-~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~Y~~sK~ 161 (335)
|+|||+|+......+..+++..+++|+.++.+++++|++.++ ++||++||.++||.....+++|+.+..|.+.|+.+|.
T Consensus 88 d~Vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~v~g~~~~~~~~E~~~~~p~~~Y~~sK~ 167 (335)
T 1rpn_A 88 QEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFGLIQAERQDENTPFYPRSPYGVAKL 167 (335)
T ss_dssp SEEEECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHH
T ss_pred CEEEECccccchhhhhhChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCHHHhCCCCCCCCCcccCCCCCChhHHHHH
Confidence 999999998765555677889999999999999999999886 8999999999999877778999999999999999999
Q ss_pred HHHHHHHHHHhhCCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHHHhCCCCceeEecccCCCCCCceeeeee
Q 019795 162 WCEEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAVRDYI 241 (335)
Q Consensus 162 ~~E~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~v 241 (335)
.+|.+++.++.++ +++++++||+++||+... .......+..++..+..+..+ ...+| ++.+.++|+
T Consensus 168 ~~e~~~~~~~~~~-~~~~~i~r~~~v~Gp~~~------~~~~~~~~~~~~~~~~~g~~~-~~~~g------~g~~~~~~i 233 (335)
T 1rpn_A 168 YGHWITVNYRESF-GLHASSGILFNHESPLRG------IEFVTRKVTDAVARIKLGKQQ-ELRLG------NVDAKRDWG 233 (335)
T ss_dssp HHHHHHHHHHHHH-CCCEEEEEECCEECTTSC------TTSHHHHHHHHHHHHHTTSCS-CEEES------CTTCEEECE
T ss_pred HHHHHHHHHHHHc-CCcEEEEeeCcccCCCCC------CCcchHHHHHHHHHHHcCCCc-eEEeC------CCcceeceE
Confidence 9999999988877 899999999999998532 100011123345555566544 34566 788999999
Q ss_pred eHhhhhc---------cCceEEecCCccccHHHHHHHHHHHhCCCCC--ceeCC--CCCCccceeeccHHHHHHhcCCcc
Q 019795 242 HVMDLAD---------GCIAYNLGNGKGISVLEMVAAFEKASGKKIP--IKFCP--RRVGDATAVYAATDKAHKELGWKP 308 (335)
Q Consensus 242 ~~~D~~~---------~~~~~nv~~~~~~s~~el~~~i~~~~g~~~~--~~~~~--~~~~~~~~~~~d~~k~~~~Lg~~p 308 (335)
|++|+++ .+++||+++++.+|+.|+++.+.+.+|.+.+ +...+ ..+.+.....+|++|+++.|||+|
T Consensus 234 ~v~Dva~a~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p 313 (335)
T 1rpn_A 234 FAGDYVEAMWLMLQQDKADDYVVATGVTTTVRDMCQIAFEHVGLDYRDFLKIDPAFFRPAEVDVLLGNPAKAQRVLGWKP 313 (335)
T ss_dssp EHHHHHHHHHHHHHSSSCCCEEECCSCEEEHHHHHHHHHHTTTCCGGGTEEECGGGCCSSCCCBCCBCTHHHHHHHCCCC
T ss_pred EHHHHHHHHHHHHhcCCCCEEEEeCCCCccHHHHHHHHHHHhCCCccccccccccccCCCcchhhcCCHHHHHHhcCCCc
Confidence 9999997 3589999999999999999999999997642 11111 233344567889999999999999
Q ss_pred ccCHHHHHHHHHHHHhcCC
Q 019795 309 KYGIEDMCAHQWNWAKNNP 327 (335)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~ 327 (335)
+++++++|+++++|++++.
T Consensus 314 ~~~l~e~l~~~~~~~~~~~ 332 (335)
T 1rpn_A 314 RTSLDELIRMMVEADLRRV 332 (335)
T ss_dssp CSCHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHhh
Confidence 9999999999999998753
|
| >3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-46 Score=336.99 Aligned_cols=291 Identities=28% Similarity=0.441 Sum_probs=241.7
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCC
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKF 82 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~ 82 (335)
++|+|||||||||||++|+++|+++|++|++++|+..........+.... ...++.++.+|++ ++
T Consensus 6 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~~~Dl~------------~~ 70 (321)
T 3vps_A 6 LKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTGKFL---EKPVLELEERDLS------------DV 70 (321)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSSCCSSCCTTSSEEE---CSCGGGCCHHHHT------------TE
T ss_pred CCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcccccchhhhhhhc---cCCCeeEEeCccc------------cC
Confidence 37899999999999999999999999999999997652111111111110 0135666667765 68
Q ss_pred CEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccCCCCCCCccCCCCCCCCChhHHhHHH
Q 019795 83 EAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQW 162 (335)
Q Consensus 83 d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~Y~~sK~~ 162 (335)
|+|||+|+.........++...++ |+.++.+++++|++.++++|||+||.++||.....+++|+.+..|.+.|+.+|..
T Consensus 71 d~vi~~a~~~~~~~~~~~~~~~~~-n~~~~~~ll~a~~~~~v~~~v~~SS~~v~~~~~~~~~~E~~~~~p~~~Y~~sK~~ 149 (321)
T 3vps_A 71 RLVYHLASHKSVPRSFKQPLDYLD-NVDSGRHLLALCTSVGVPKVVVGSTCEVYGQADTLPTPEDSPLSPRSPYAASKVG 149 (321)
T ss_dssp EEEEECCCCCCHHHHTTSTTTTHH-HHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHH
T ss_pred CEEEECCccCChHHHHhCHHHHHH-HHHHHHHHHHHHHHcCCCeEEEecCHHHhCCCCCCCCCCCCCCCCCChhHHHHHH
Confidence 999999998766556667777888 9999999999999999999999999999999888899999999999999999999
Q ss_pred HHHHHHHHHhhCCCC-eEEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHHHhCCCCceeEecccCCCCCCceeeeee
Q 019795 163 CEEIAFDVQKADPEW-RIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAVRDYI 241 (335)
Q Consensus 163 ~E~~~~~~~~~~~~~-~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~v 241 (335)
+|++++.+..++ ++ +++++||+++||+... ...+.+.+......+.+ +.++| ++...++|+
T Consensus 150 ~E~~~~~~~~~~-~~~~~~ilRp~~v~G~~~~----------~~~~~~~~~~~~~~~~~-~~~~~------~~~~~~~~v 211 (321)
T 3vps_A 150 LEMVAGAHQRAS-VAPEVGIVRFFNVYGPGER----------PDALVPRLCANLLTRNE-LPVEG------DGEQRRDFT 211 (321)
T ss_dssp HHHHHHHHHHSS-SSCEEEEEEECEEECTTCC----------TTSHHHHHHHHHHHHSE-EEEET------TSCCEECEE
T ss_pred HHHHHHHHHHHc-CCCceEEEEeccccCcCCC----------CCChHHHHHHHHHcCCC-eEEeC------CCCceEceE
Confidence 999999998887 88 9999999999998543 23355544443333333 67777 788999999
Q ss_pred eHhhhhc----------cCceEEecCCccccHHHHHHHHHHHhCCCCCceeCCCCCCccceeeccHHHHHHhcCCcc-cc
Q 019795 242 HVMDLAD----------GCIAYNLGNGKGISVLEMVAAFEKASGKKIPIKFCPRRVGDATAVYAATDKAHKELGWKP-KY 310 (335)
Q Consensus 242 ~~~D~~~----------~~~~~nv~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~d~~k~~~~Lg~~p-~~ 310 (335)
|++|+++ .+ +||+++++.+|+.|+++.+. .+|.+.++...+..........+|++|+++.|||+| ++
T Consensus 212 ~v~Dva~~~~~~~~~~~~g-~~~i~~~~~~s~~e~~~~i~-~~g~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~ 289 (321)
T 3vps_A 212 YITDVVDKLVALANRPLPS-VVNFGSGQSLSVNDVIRILQ-ATSPAAEVARKQPRPNEITEFRADTALQTRQIGERSGGI 289 (321)
T ss_dssp EHHHHHHHHHHGGGSCCCS-EEEESCSCCEEHHHHHHHHH-TTCTTCEEEEECCCTTCCSBCCBCCHHHHHHHCCCSCCC
T ss_pred EHHHHHHHHHHHHhcCCCC-eEEecCCCcccHHHHHHHHH-HhCCCCccccCCCCCCCcceeeccHHHHHHHhCCCCCcC
Confidence 9999997 34 99999999999999999999 999998888777777778889999999999999999 88
Q ss_pred CHHHHHHHHHHHHhcCCCC
Q 019795 311 GIEDMCAHQWNWAKNNPMG 329 (335)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~ 329 (335)
+++++|+++++|++++...
T Consensus 290 ~~~~~l~~~~~~~~~~~~~ 308 (321)
T 3vps_A 290 GIEEGIRLTLEWWQSRDLD 308 (321)
T ss_dssp CHHHHHHHHHHHHHTSCTT
T ss_pred CHHHHHHHHHHHHHhCCCc
Confidence 9999999999999998753
|
| >1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-45 Score=362.62 Aligned_cols=328 Identities=48% Similarity=0.892 Sum_probs=259.5
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCC
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQK 81 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~ 81 (335)
+++|+|||||||||||++|+++|+++|++|++++|...........+..... .++.++.+|++|.+++.++++..+
T Consensus 9 ~~~~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~----~~v~~v~~Dl~d~~~l~~~~~~~~ 84 (699)
T 1z45_A 9 STSKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTK----HHIPFYEVDLCDRKGLEKVFKEYK 84 (699)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHT----SCCCEEECCTTCHHHHHHHHHHSC
T ss_pred cCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCcchHHHHHHHhhccC----CceEEEEcCCCCHHHHHHHHHhCC
Confidence 3568999999999999999999999999999999976554333333322211 568899999999999999998667
Q ss_pred CCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccCCCC----CCCccCCCCCCCCChhH
Q 019795 82 FEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQPE----KIPCVEDFPYGAMNPYG 157 (335)
Q Consensus 82 ~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~----~~~~~e~~~~~~~~~Y~ 157 (335)
+|+|||+|+..........+...+++|+.++.+++++|++.++++||++||.++||... ..+++|+.+..|.+.|+
T Consensus 85 ~D~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~iV~~SS~~vyg~~~~~~~~~~~~E~~~~~p~~~Y~ 164 (699)
T 1z45_A 85 IDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFSSSATVYGDATRFPNMIPIPEECPLGPTNPYG 164 (699)
T ss_dssp CCEEEECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCCGGGSTTCCSBCTTSCCCCCSHHH
T ss_pred CCEEEECCcccCcCccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECcHHHhCCCccccccCCccccCCCCCCChHH
Confidence 99999999986554445667788999999999999999998889999999999998642 35788888888999999
Q ss_pred HhHHHHHHHHHHHHhhC-CCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHHHhCCCCceeEecccCCCCCCce
Q 019795 158 RTKQWCEEIAFDVQKAD-PEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSA 236 (335)
Q Consensus 158 ~sK~~~E~~~~~~~~~~-~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 236 (335)
.+|.++|++++.++.+. .+++++++||+++||+++...+|+........+++.+...+.+....+.++|+.....++.+
T Consensus 165 ~sK~~~E~~~~~~~~~~~~g~~~~ilR~~~vyG~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~ 244 (699)
T 1z45_A 165 HTKYAIENILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDGTP 244 (699)
T ss_dssp HHHHHHHHHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC------CCSSC
T ss_pred HHHHHHHHHHHHHHHhccCCCcEEEEEeccccCCCcccccccccccchhHHHHHHHHHHhcCCCceEEeCCcccCCCCCe
Confidence 99999999999887762 38999999999999998888888765444566778777776653222455552222225778
Q ss_pred eeeeeeHhhhhc-------c----------CceEEecCCccccHHHHHHHHHHHhCCCCCceeCCCCCCccceeeccHHH
Q 019795 237 VRDYIHVMDLAD-------G----------CIAYNLGNGKGISVLEMVAAFEKASGKKIPIKFCPRRVGDATAVYAATDK 299 (335)
Q Consensus 237 ~~~~v~~~D~~~-------~----------~~~~nv~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~d~~k 299 (335)
.++|||++|+|+ . +++||+++++.+|+.|+++.+.+.+|.+.++...+....+.....+|++|
T Consensus 245 ~~~~i~v~Dva~a~~~a~~~~~~~~~~~~~~~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~d~~k 324 (699)
T 1z45_A 245 IRDYIHVVDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGSTVFEVYHAFCKASGIDLPYKVTGRRAGDVLNLTAKPDR 324 (699)
T ss_dssp EECEEEHHHHHHHHHHHHHHHHHSCTTCCEEEEEEESCSCCEEHHHHHHHHHHHHTCCCCC---------CCCCCBCCHH
T ss_pred eEeeEEHHHHHHHHHHHHhhhhccccccCCceEEEECCCCCCcHHHHHHHHHHHhCCCCCceecCCCCCccccccCCHHH
Confidence 899999999986 0 25899999999999999999999999887766555444555678899999
Q ss_pred HHHhcCCccccCHHHHHHHHHHHHhcCCCCcccC
Q 019795 300 AHKELGWKPKYGIEDMCAHQWNWAKNNPMGYQTK 333 (335)
Q Consensus 300 ~~~~Lg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (335)
+++.|||+|+++++++|+++++|+++++..|.-+
T Consensus 325 a~~~LG~~p~~~l~egl~~~~~w~~~~~~~~~~~ 358 (699)
T 1z45_A 325 AKRELKWQTELQVEDSCKDLWKWTTENPFGYQLR 358 (699)
T ss_dssp HHHHTCCCCCCCHHHHHHHHHHHHHHCTTCSCCT
T ss_pred HHHhcCCCCCCCHHHHHHHHHHHHHhCCcchhhh
Confidence 9999999999999999999999999998877643
|
| >1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-45 Score=334.52 Aligned_cols=303 Identities=22% Similarity=0.317 Sum_probs=242.7
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCC
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQK 81 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~ 81 (335)
+++|+|||||||||||++|+++|+++|++|++++|+..........+. ...++.++.+|++|.+++.++++..+
T Consensus 7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~------~~~~~~~~~~Dl~d~~~~~~~~~~~~ 80 (357)
T 1rkx_A 7 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETAR------VADGMQSEIGDIRDQNKLLESIREFQ 80 (357)
T ss_dssp HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTT------TTTTSEEEECCTTCHHHHHHHHHHHC
T ss_pred hCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhc------cCCceEEEEccccCHHHHHHHHHhcC
Confidence 467899999999999999999999999999999998765443332221 01578899999999999999998545
Q ss_pred CCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcC-CCEEEEeccccccCCCCC-CCccCCCCCCCCChhHHh
Q 019795 82 FEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYN-CKKLVFSSSATIYGQPEK-IPCVEDFPYGAMNPYGRT 159 (335)
Q Consensus 82 ~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~v~~Ss~~vyg~~~~-~~~~e~~~~~~~~~Y~~s 159 (335)
+|+|||+|+......+..++...+++|+.++.+++++|++.+ +++||++||.++||.... .+.+|+.+..|.+.|+.+
T Consensus 81 ~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~E~~~~~~~~~Y~~s 160 (357)
T 1rkx_A 81 PEIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEWIWGYRENEAMGGYDPYSNS 160 (357)
T ss_dssp CSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCCSSSCBCTTSCBCCSSHHHHH
T ss_pred CCEEEECCCCcccccchhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEecCHHHhCCCCcCCCCCCCCCCCCCCccHHH
Confidence 899999999765555567788999999999999999999886 789999999999987653 478888888889999999
Q ss_pred HHHHHHHHHHHHhhCC--------CCeEEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHHHhCCCCceeEecccCCC
Q 019795 160 KQWCEEIAFDVQKADP--------EWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPT 231 (335)
Q Consensus 160 K~~~E~~~~~~~~~~~--------~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 231 (335)
|..+|++++.++.++. +++++++||++|||+.... ...+++.+...+..+.+ +.+.
T Consensus 161 K~~~e~~~~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G~~~~~---------~~~~~~~~~~~~~~g~~-~~~~------ 224 (357)
T 1rkx_A 161 KGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWA---------LDRIVPDILRAFEQSQP-VIIR------ 224 (357)
T ss_dssp HHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCC---------SSCHHHHHHHHHHTTCC-EECS------
T ss_pred HHHHHHHHHHHHHHHhhhhccccCCceEEEEeeceeeCCCCCc---------cccHHHHHHHHHhcCCC-EEEC------
Confidence 9999999998876542 8999999999999985320 13355554444433333 4433
Q ss_pred CCCceeeeeeeHhhhhc---------------cCceEEecCC--ccccHHHHHHHHHHHhCCCCCceeCCC-CCCcccee
Q 019795 232 KDGSAVRDYIHVMDLAD---------------GCIAYNLGNG--KGISVLEMVAAFEKASGKKIPIKFCPR-RVGDATAV 293 (335)
Q Consensus 232 ~~~~~~~~~v~~~D~~~---------------~~~~~nv~~~--~~~s~~el~~~i~~~~g~~~~~~~~~~-~~~~~~~~ 293 (335)
++.+.++|+|++|+++ .+++||++++ +.+|+.|+++.+.+.+|.+.++...+. .+.+....
T Consensus 225 -~~~~~~~~v~v~Dva~a~~~~~~~~~~~~~~~~~~~ni~~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~ 303 (357)
T 1rkx_A 225 -NPHAIRPWQHVLEPLSGYLLLAQKLYTDGAEYAEGWNFGPNDADATPVKNIVEQMVKYWGEGASWQLDGNAHPHEAHYL 303 (357)
T ss_dssp -CTTCEECCEETHHHHHHHHHHHHHHHHTCGGGCSEEECCCCGGGCEEHHHHHHHHHHHHCTTCCEEC-------CCCCC
T ss_pred -CCCCeeccEeHHHHHHHHHHHHHhhhhcCCCCCceEEECCCCCCcccHHHHHHHHHHHhCCCCccccCCCCCCcCcccc
Confidence 4678899999999875 2579999974 689999999999999998766544332 23345667
Q ss_pred eccHHHHHHhcCCccccCHHHHHHHHHHHHhcCC
Q 019795 294 YAATDKAHKELGWKPKYGIEDMCAHQWNWAKNNP 327 (335)
Q Consensus 294 ~~d~~k~~~~Lg~~p~~~~~~~~~~~~~~~~~~~ 327 (335)
.+|++|+++.|||+|+++++++|+++++|++++.
T Consensus 304 ~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~~ 337 (357)
T 1rkx_A 304 KLDCSKAKMQLGWHPRWNLNTTLEYIVGWHKNWL 337 (357)
T ss_dssp CBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHhCCCcCCcHHHHHHHHHHHHHHHh
Confidence 8999999999999999999999999999998754
|
| >2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-45 Score=339.56 Aligned_cols=305 Identities=25% Similarity=0.429 Sum_probs=238.0
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCC-CeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcC
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGG-FKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQ 80 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~ 80 (335)
++||+|||||||||||++|+++|+++| ++|++++|+....... +. ...++.++.+|++|.+++.++++
T Consensus 30 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~---l~------~~~~v~~~~~Dl~d~~~l~~~~~-- 98 (377)
T 2q1s_A 30 LANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKIN---VP------DHPAVRFSETSITDDALLASLQD-- 98 (377)
T ss_dssp GTTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGGG---SC------CCTTEEEECSCTTCHHHHHHCCS--
T ss_pred hCCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchhh---cc------CCCceEEEECCCCCHHHHHHHhh--
Confidence 356899999999999999999999999 9999999976543211 11 01578899999999999999998
Q ss_pred CCCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHc-CCCEEEEeccccccCCCCCCCcc--CCC---CC-CCC
Q 019795 81 KFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKY-NCKKLVFSSSATIYGQPEKIPCV--EDF---PY-GAM 153 (335)
Q Consensus 81 ~~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~-~~~~~v~~Ss~~vyg~~~~~~~~--e~~---~~-~~~ 153 (335)
++|+|||+|+......+..+++..+++|+.++.+++++|++. ++++||++||.++||.....+++ |+. +. .|.
T Consensus 99 ~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~V~~SS~~vyg~~~~~~~~~~E~~~~~~~~~~~ 178 (377)
T 2q1s_A 99 EYDYVFHLATYHGNQSSIHDPLADHENNTLTTLKLYERLKHFKRLKKVVYSAAGCSIAEKTFDDAKATEETDIVSLHNND 178 (377)
T ss_dssp CCSEEEECCCCSCHHHHHHCHHHHHHHHTHHHHHHHHHHTTCSSCCEEEEEEEC--------------CCCCCCCSSCCC
T ss_pred CCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCCHHHcCCCCCCCcCcccccccccccCCC
Confidence 899999999986655556678899999999999999999998 88999999999999987666777 887 66 788
Q ss_pred ChhHHhHHHHHHHHHHHHhhCCCCeEEEEecccccCCCCCCCCCC---CCCCCCCChHHHH-HHHHhCCCCceeEecccC
Q 019795 154 NPYGRTKQWCEEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGE---DPKGIPNNLMPYI-QQVAVGRHPELNVYGQDY 229 (335)
Q Consensus 154 ~~Y~~sK~~~E~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~g~---~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~ 229 (335)
+.|+.+|..+|++++.++.+. +++++++||++|||+...+..|. ........+++.+ ..+..+. + +.++|
T Consensus 179 ~~Y~~sK~~~E~~~~~~~~~~-gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~-~-~~~~g--- 252 (377)
T 2q1s_A 179 SPYSMSKIFGEFYSVYYHKQH-QLPTVRARFQNVYGPGEILGAGRWRGTPATVWRNVTPTFIYKALKGM-P-LPLEN--- 252 (377)
T ss_dssp SHHHHHHHHHHHHHHHHHHHH-CCCEEEEEECCEECTTCCTTCSSCCSSGGGTSCSHHHHHHHHHHTTC-C-CCCSG---
T ss_pred CchHHHHHHHHHHHHHHHHHh-CCCEEEEeeccEECCCCcccccccccCcccccccHHHHHHHHHHcCC-C-eEEeC---
Confidence 899999999999999988777 99999999999999964211110 0000002345544 4444444 3 45566
Q ss_pred CCCCCceeeeeeeHhhhhcc----------CceEEecCCccccHHHHHHHHHHHhCCCCCceeCCCCCCccc-eeeccHH
Q 019795 230 PTKDGSAVRDYIHVMDLADG----------CIAYNLGNGKGISVLEMVAAFEKASGKKIPIKFCPRRVGDAT-AVYAATD 298 (335)
Q Consensus 230 ~~~~~~~~~~~v~~~D~~~~----------~~~~nv~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~-~~~~d~~ 298 (335)
++.+.++|+|++|+++. .++||+++++.+|+.|+++.+.+.+|.+.++...|..+.+.. ...+|++
T Consensus 253 ---~g~~~~~~i~v~Dva~a~i~~~~~~~~~g~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~p~~~~~~~~~~~~d~~ 329 (377)
T 2q1s_A 253 ---GGVATRDFIFVEDVANGLIACAADGTPGGVYNIASGKETSIADLATKINEITGNNTELDRLPKRPWDNSGKRFGSPE 329 (377)
T ss_dssp ---GGCCEECCEEHHHHHHHHHHHHHHCCTTEEEECCCCCCEEHHHHHHHHHHHHTCCSCCCCCCCCGGGCC-CCCCCCH
T ss_pred ---CCCeEEeeEEHHHHHHHHHHHHHhcCCCCeEEecCCCceeHHHHHHHHHHHhCCCCCceeCCCCccccccccccCHH
Confidence 67889999999998763 349999999999999999999999998877666655544555 7889999
Q ss_pred HHHHhcCCccccCHHHHHHHHHHHHhcC
Q 019795 299 KAHKELGWKPKYGIEDMCAHQWNWAKNN 326 (335)
Q Consensus 299 k~~~~Lg~~p~~~~~~~~~~~~~~~~~~ 326 (335)
|+++.|||+|+++++++|+++++|++++
T Consensus 330 k~~~~lG~~p~~~l~e~l~~~~~~~~~~ 357 (377)
T 2q1s_A 330 KARRELGFSADVSIDDGLRKTIEWTKAN 357 (377)
T ss_dssp HHHHHHCCCCCCCHHHHHHHHHHHHHHT
T ss_pred HHHHHcCCCCCCCHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999876
|
| >2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.3e-45 Score=333.54 Aligned_cols=297 Identities=22% Similarity=0.281 Sum_probs=243.1
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCC
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKF 82 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~ 82 (335)
+||+|||||||||||++|+++|+++|++|++++|+........ ..++.++.+|++|.+++.++++ ++
T Consensus 28 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-----------~~~v~~~~~Dl~d~~~~~~~~~--~~ 94 (379)
T 2c5a_A 28 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTED-----------MFCDEFHLVDLRVMENCLKVTE--GV 94 (379)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCGG-----------GTCSEEEECCTTSHHHHHHHHT--TC
T ss_pred cCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhhc-----------cCCceEEECCCCCHHHHHHHhC--CC
Confidence 4689999999999999999999999999999999765432111 1468899999999999999998 89
Q ss_pred CEEEEcccccchhh-hhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccCCCCC-----CCccCCC--CCCCCC
Q 019795 83 EAVIHFGALKAVAE-SVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQPEK-----IPCVEDF--PYGAMN 154 (335)
Q Consensus 83 d~vi~~a~~~~~~~-~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~-----~~~~e~~--~~~~~~ 154 (335)
|+|||+|+...... ...+++..+++|+.++.+++++|++.++++||++||.++|+.... .+++|++ +..|.+
T Consensus 95 d~Vih~A~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~~V~~SS~~v~~~~~~~~~~~~~~~E~~~~~~~~~~ 174 (379)
T 2c5a_A 95 DHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQD 174 (379)
T ss_dssp SEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEGGGSCGGGSSSSSSCEECGGGGSSBCCSS
T ss_pred CEEEECceecCcccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeehheeCCCCCCCccCCCcCcccCCCCCCCC
Confidence 99999999754322 256778899999999999999999999999999999999986422 3577776 667788
Q ss_pred hhHHhHHHHHHHHHHHHhhCCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHH-HHHHHHhCCCCceeEecccCCCCC
Q 019795 155 PYGRTKQWCEEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMP-YIQQVAVGRHPELNVYGQDYPTKD 233 (335)
Q Consensus 155 ~Y~~sK~~~E~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~ 233 (335)
.|+.+|..+|++++.++.+. +++++++||+++||+......+ ...+.+ ++..+..+... +.++| +
T Consensus 175 ~Y~~sK~~~E~~~~~~~~~~-gi~~~ilrp~~v~G~~~~~~~~------~~~~~~~~~~~~~~~~~~-~~~~g------~ 240 (379)
T 2c5a_A 175 AFGLEKLATEELCKHYNKDF-GIECRIGRFHNIYGPFGTWKGG------REKAPAAFCRKAQTSTDR-FEMWG------D 240 (379)
T ss_dssp HHHHHHHHHHHHHHHHHHHH-CCEEEEEEECCEECTTSCCSSS------CCCHHHHHHHHHHHCSSC-EEEES------C
T ss_pred hhHHHHHHHHHHHHHHHHHH-CCCEEEEEeCceeCcCCCcccc------cccHHHHHHHHHHhCCCc-eEEeC------C
Confidence 99999999999999988777 9999999999999995431100 112344 44455555543 66777 7
Q ss_pred CceeeeeeeHhhhhc---------cCceEEecCCccccHHHHHHHHHHHhCCCCCceeCCCCCCccceeeccHHHHHHhc
Q 019795 234 GSAVRDYIHVMDLAD---------GCIAYNLGNGKGISVLEMVAAFEKASGKKIPIKFCPRRVGDATAVYAATDKAHKEL 304 (335)
Q Consensus 234 ~~~~~~~v~~~D~~~---------~~~~~nv~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~d~~k~~~~L 304 (335)
+.+.++|+|++|+++ .+++||+++++.+|+.|+++.+.+.+|.+.++...+.+. ......+|++|+++.|
T Consensus 241 g~~~~~~i~v~Dva~ai~~~l~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~p~~~-~~~~~~~d~~k~~~~l 319 (379)
T 2c5a_A 241 GLQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEMVLSFEEKKLPIHHIPGPE-GVRGRNSDNNLIKEKL 319 (379)
T ss_dssp SCCEECCEEHHHHHHHHHHHHHSSCCSCEEECCCCCEEHHHHHHHHHHTTTCCCCEEEECCCC-CCSBCEECCHHHHHHH
T ss_pred CCeeEEEEEHHHHHHHHHHHhhccCCCeEEeCCCCccCHHHHHHHHHHHhCCCCceeeCCCCC-CcccccCCHHHHHHHh
Confidence 888999999999997 468999999999999999999999999887766555432 3445678999999999
Q ss_pred CCccccCHHHHHHHHHHHHhcCC
Q 019795 305 GWKPKYGIEDMCAHQWNWAKNNP 327 (335)
Q Consensus 305 g~~p~~~~~~~~~~~~~~~~~~~ 327 (335)
||+|+++++++|+++++|++++.
T Consensus 320 G~~p~~~l~e~l~~~~~~~~~~~ 342 (379)
T 2c5a_A 320 GWAPNMRLKEGLRITYFWIKEQI 342 (379)
T ss_dssp SCCCCCCHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHHhH
Confidence 99999999999999999998753
|
| >2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.2e-45 Score=329.36 Aligned_cols=307 Identities=21% Similarity=0.258 Sum_probs=244.2
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCC
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQK 81 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~ 81 (335)
|++|+|||||||||||++|+++|+++|++|++++|+...... ..+..... ..++.++.+|++|.+++.++++..+
T Consensus 1 m~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~--~~~~~~~~---~~~~~~~~~Dl~d~~~~~~~~~~~~ 75 (345)
T 2z1m_A 1 MSGKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFAS--WRLKELGI---ENDVKIIHMDLLEFSNIIRTIEKVQ 75 (345)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTT--HHHHHTTC---TTTEEECCCCTTCHHHHHHHHHHHC
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCccccc--ccHhhccc---cCceeEEECCCCCHHHHHHHHHhcC
Confidence 457899999999999999999999999999999997654321 12222111 1468899999999999999998556
Q ss_pred CCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCC-CEEEEeccccccCCCCCCCccCCCCCCCCChhHHhH
Q 019795 82 FEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNC-KKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTK 160 (335)
Q Consensus 82 ~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~-~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~Y~~sK 160 (335)
+|+|||+|+......+.++++..+++|+.++.+++++|++.++ ++||++||.++||.....+++|+.+..|.+.|+.+|
T Consensus 76 ~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~e~~~~~~~~~Y~~sK 155 (345)
T 2z1m_A 76 PDEVYNLAAQSFVGVSFEQPILTAEVDAIGVLRILEALRTVKPDTKFYQASTSEMFGKVQEIPQTEKTPFYPRSPYAVAK 155 (345)
T ss_dssp CSEEEECCCCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHH
T ss_pred CCEEEECCCCcchhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEechhhcCCCCCCCCCccCCCCCCChhHHHH
Confidence 8999999998765555678889999999999999999998886 899999999999988777889999999999999999
Q ss_pred HHHHHHHHHHHhhCCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHHHhCCCCceeEecccCCCCCCceeeee
Q 019795 161 QWCEEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAVRDY 240 (335)
Q Consensus 161 ~~~E~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 240 (335)
..+|.+++.++.++ +++++++|+.++|||... .......+...+..+..+... ...+| ++...++|
T Consensus 156 ~~~e~~~~~~~~~~-~~~~~~~r~~~~~gpg~~------~~~~~~~~~~~~~~~~~~~~~-~~~~~------~~~~~~~~ 221 (345)
T 2z1m_A 156 LFGHWITVNYREAY-NMFACSGILFNHESPLRG------IEFVTRKITYSLARIKYGLQD-KLVLG------NLNAKRDW 221 (345)
T ss_dssp HHHHHHHHHHHHHH-CCCEEEEEECCEECTTSC------TTSHHHHHHHHHHHHHTTSCS-CEEES------CTTCEECC
T ss_pred HHHHHHHHHHHHHh-CCceEeeeeeeecCCCCC------CcchhHHHHHHHHHHHcCCCC-eeeeC------CCCceeee
Confidence 99999999988877 899999999999999532 111011112233444455443 33456 67788999
Q ss_pred eeHhhhhc---------cCceEEecCCccccHHHHHHHHHHHhCCCCCce-------------------eCC--CCCCcc
Q 019795 241 IHVMDLAD---------GCIAYNLGNGKGISVLEMVAAFEKASGKKIPIK-------------------FCP--RRVGDA 290 (335)
Q Consensus 241 v~~~D~~~---------~~~~~nv~~~~~~s~~el~~~i~~~~g~~~~~~-------------------~~~--~~~~~~ 290 (335)
+|++|+++ .+++||+++++.+|+.|+++.+.+.+|.+.++. ..+ ..+...
T Consensus 222 ~~v~Dva~a~~~~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (345)
T 2z1m_A 222 GYAPEYVEAMWLMMQQPEPDDYVIATGETHTVREFVEKAAKIAGFDIEWVGEGINEKGIDRNTGKVIVEVSEEFFRPAEV 301 (345)
T ss_dssp EEHHHHHHHHHHHHTSSSCCCEEECCSCCEEHHHHHHHHHHHTTCCEEEESCGGGCEEEETTTCCEEEEECGGGSCSSCC
T ss_pred EEHHHHHHHHHHHHhCCCCceEEEeCCCCccHHHHHHHHHHHhCCCccccccccccccccccccccccccCcccCCCCCc
Confidence 99999997 357999999999999999999999999874321 111 122334
Q ss_pred ceeeccHHHHHHhcCCccccCHHHHHHHHHHHHhcCC
Q 019795 291 TAVYAATDKAHKELGWKPKYGIEDMCAHQWNWAKNNP 327 (335)
Q Consensus 291 ~~~~~d~~k~~~~Lg~~p~~~~~~~~~~~~~~~~~~~ 327 (335)
....+|++|+++.|||+|+++++++|+++++|++++.
T Consensus 302 ~~~~~d~~k~~~~lG~~p~~~~~~~l~~~~~~~~~~~ 338 (345)
T 2z1m_A 302 DILVGNPEKAMKKLGWKPRTTFDELVEIMMEADLKRV 338 (345)
T ss_dssp CBCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHHH
T ss_pred ceeecCHHHHHHHcCCcccCCHHHHHHHHHHHHHHHh
Confidence 5567899999999999999999999999999998754
|
| >1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-44 Score=332.86 Aligned_cols=310 Identities=21% Similarity=0.266 Sum_probs=243.7
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCch-hhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCC
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVP-EAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKF 82 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~ 82 (335)
||+|||||||||||++|+++|+++|++|++++|+..... .....+..........++.++.+|++|.+++.++++..++
T Consensus 24 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 103 (375)
T 1t2a_A 24 RNVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKP 103 (375)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHHCC
T ss_pred CcEEEEECCCchHHHHHHHHHHHCCCEEEEEECCccccchhhHHHHhhhhccccCCCceEEEccCCCHHHHHHHHHhcCC
Confidence 378999999999999999999999999999999765321 1111111000000114688999999999999999985568
Q ss_pred CEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCC---CEEEEeccccccCCCCCCCccCCCCCCCCChhHHh
Q 019795 83 EAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNC---KKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRT 159 (335)
Q Consensus 83 d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~---~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~Y~~s 159 (335)
|+|||+|+......+..+++..+++|+.++.+++++|++.++ ++||++||.++||.....+++|+++..|.+.|+.+
T Consensus 104 d~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~E~~~~~~~~~Y~~s 183 (375)
T 1t2a_A 104 TEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAA 183 (375)
T ss_dssp SEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCSCSSSSBCTTSCCCCCSHHHHH
T ss_pred CEEEECCCcccccccccCHHHHHHHHHHHHHHHHHHHHHhCCCccceEEEecchhhhCCCCCCCCCccCCCCCCChhHHH
Confidence 999999998765555677889999999999999999999887 79999999999998777789999999999999999
Q ss_pred HHHHHHHHHHHHhhCCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHHHhCCCCceeEecccCCCCCCceeee
Q 019795 160 KQWCEEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAVRD 239 (335)
Q Consensus 160 K~~~E~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 239 (335)
|..+|.+++.++.++ +++++++|++++|||... .......+..++..+..+..+ ...+| ++.+.++
T Consensus 184 K~~~e~~~~~~~~~~-~~~~~i~r~~~~~gp~~~------~~~~~~~~~~~~~~~~~g~~~-~~~~g------~~~~~~~ 249 (375)
T 1t2a_A 184 KLYAYWIVVNFREAY-NLFAVNGILFNHESPRRG------ANFVTRKISRSVAKIYLGQLE-CFSLG------NLDAKRD 249 (375)
T ss_dssp HHHHHHHHHHHHHHH-CCEEEEEEECCEECTTSC------TTSHHHHHHHHHHHHHHTSCS-CEEES------CTTCEEC
T ss_pred HHHHHHHHHHHHHHh-CCCEEEEecccccCCCCC------CCcchHHHHHHHHHHHcCCCc-eeEeC------CCCceee
Confidence 999999999988877 899999999999998532 100011123344555566544 34566 6888999
Q ss_pred eeeHhhhhc---------cCceEEecCCccccHHHHHHHHHHHhCCCCCce-------------------eCC--CCCCc
Q 019795 240 YIHVMDLAD---------GCIAYNLGNGKGISVLEMVAAFEKASGKKIPIK-------------------FCP--RRVGD 289 (335)
Q Consensus 240 ~v~~~D~~~---------~~~~~nv~~~~~~s~~el~~~i~~~~g~~~~~~-------------------~~~--~~~~~ 289 (335)
|+|++|+++ .+++||+++++.+|+.|+++.+.+.+|.+.++. ..+ ..+.+
T Consensus 250 ~i~v~Dva~a~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 329 (375)
T 1t2a_A 250 WGHAKDYVEAMWLMLQNDEPEDFVIATGEVHSVREFVEKSFLHIGKTIVWEGKNENEVGRCKETGKVHVTVDLKYYRPTE 329 (375)
T ss_dssp CEEHHHHHHHHHHHHHSSSCCCEEECCSCCEEHHHHHHHHHHHTTCCEEEESCGGGCEEEETTTCCEEEEECGGGSCSSC
T ss_pred eEEHHHHHHHHHHHHhcCCCceEEEeCCCcccHHHHHHHHHHHhCCCcccccccccccccccccccceeecCcccCCccc
Confidence 999999997 358999999999999999999999999774321 111 12233
Q ss_pred cceeeccHHHHHHhcCCccccCHHHHHHHHHHHHhcCC
Q 019795 290 ATAVYAATDKAHKELGWKPKYGIEDMCAHQWNWAKNNP 327 (335)
Q Consensus 290 ~~~~~~d~~k~~~~Lg~~p~~~~~~~~~~~~~~~~~~~ 327 (335)
.....+|++|+++.|||+|+++++++|+++++|+++..
T Consensus 330 ~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~~ 367 (375)
T 1t2a_A 330 VDFLQGDCTKAKQKLNWKPRVAFDELVREMVHADVELM 367 (375)
T ss_dssp CCBCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHHH
T ss_pred chhhcCCHHHHHHhcCCCccCCHHHHHHHHHHHHHHhh
Confidence 45667899999999999999999999999999998743
|
| >2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-44 Score=327.76 Aligned_cols=295 Identities=26% Similarity=0.452 Sum_probs=238.8
Q ss_pred CCCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcC
Q 019795 1 MASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQ 80 (335)
Q Consensus 1 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~ 80 (335)
++++|+|||||||||||++|+++|+++|++|++++|...........+. . ..++.++.+|+.+.. +.
T Consensus 24 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~---~---~~~~~~~~~D~~~~~-----~~-- 90 (343)
T 2b69_A 24 EKDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWI---G---HENFELINHDVVEPL-----YI-- 90 (343)
T ss_dssp ---CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGT---T---CTTEEEEECCTTSCC-----CC--
T ss_pred ccCCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCCccchhhhhhhc---c---CCceEEEeCccCChh-----hc--
Confidence 3567899999999999999999999999999999997543322211111 0 156889999998753 33
Q ss_pred CCCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccCCCCCCCccCC-----CCCCCCCh
Q 019795 81 KFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQPEKIPCVED-----FPYGAMNP 155 (335)
Q Consensus 81 ~~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~e~-----~~~~~~~~ 155 (335)
++|+|||+|+.........+++..+++|+.++.+++++|++.++ ++|++||.++||.....+++|+ .+..|.+.
T Consensus 91 ~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~ 169 (343)
T 2b69_A 91 EVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGA-RLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRAC 169 (343)
T ss_dssp CCSEEEECCSCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTC-EEEEEEEGGGGBSCSSSSBCTTCCCBCCSSSTTHH
T ss_pred CCCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCC-cEEEECcHHHhCCCCCCCCcccccccCCCCCCCCc
Confidence 79999999998655445567788999999999999999999886 9999999999998766778887 45667778
Q ss_pred hHHhHHHHHHHHHHHHhhCCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHH-HHHHHHhCCCCceeEecccCCCCCC
Q 019795 156 YGRTKQWCEEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMP-YIQQVAVGRHPELNVYGQDYPTKDG 234 (335)
Q Consensus 156 Y~~sK~~~E~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~ 234 (335)
|+.+|..+|++++.++++. +++++++||+++||+..... ...+++ ++...+.+.. +.++| ++
T Consensus 170 Y~~sK~~~E~~~~~~~~~~-~~~~~ilrp~~v~G~~~~~~--------~~~~~~~~~~~~~~~~~--~~~~~------~~ 232 (343)
T 2b69_A 170 YDEGKRVAETMCYAYMKQE-GVEVRVARIFNTFGPRMHMN--------DGRVVSNFILQALQGEP--LTVYG------SG 232 (343)
T ss_dssp HHHHHHHHHHHHHHHHHHH-CCCEEEEEECCEECTTCCTT--------CCCHHHHHHHHHHHTCC--EEEES------SS
T ss_pred hHHHHHHHHHHHHHHHHHh-CCcEEEEEEcceeCcCCCCC--------cccHHHHHHHHHHcCCC--ceEcC------CC
Confidence 9999999999999888776 99999999999999853210 122444 4445555543 56777 78
Q ss_pred ceeeeeeeHhhhhc---------cCceEEecCCccccHHHHHHHHHHHhCCCCCceeCCCCCCccceeeccHHHHHHhcC
Q 019795 235 SAVRDYIHVMDLAD---------GCIAYNLGNGKGISVLEMVAAFEKASGKKIPIKFCPRRVGDATAVYAATDKAHKELG 305 (335)
Q Consensus 235 ~~~~~~v~~~D~~~---------~~~~~nv~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~d~~k~~~~Lg 305 (335)
.+.++|+|++|+++ .+++||+++++.+|+.|+++.+.+.+|.+.++...+....+.....+|++|+++.||
T Consensus 233 ~~~~~~v~v~Dva~a~~~~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~p~~~~~~~~~~~d~~k~~~~lG 312 (343)
T 2b69_A 233 SQTRAFQYVSDLVNGLVALMNSNVSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKKAKLMLG 312 (343)
T ss_dssp CCEEECEEHHHHHHHHHHHHTSSCCSCEEESCCCEEEHHHHHHHHHHHHTCCCCEEEECCCTTCCCCCCBCCHHHHHHHC
T ss_pred CeEEeeEeHHHHHHHHHHHHhcCCCCeEEecCCCCCcHHHHHHHHHHHhCCCCCceeCCCCCCCCceecCCHHHHHHHcC
Confidence 88999999999997 367999999999999999999999999887777666555555677889999999999
Q ss_pred CccccCHHHHHHHHHHHHhcC
Q 019795 306 WKPKYGIEDMCAHQWNWAKNN 326 (335)
Q Consensus 306 ~~p~~~~~~~~~~~~~~~~~~ 326 (335)
|+|+++++++|+++++|++++
T Consensus 313 ~~p~~~l~e~l~~~~~~~~~~ 333 (343)
T 2b69_A 313 WEPVVPLEEGLNKAIHYFRKE 333 (343)
T ss_dssp CCCCSCHHHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHH
Confidence 999999999999999999875
|
| >1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-44 Score=330.33 Aligned_cols=298 Identities=26% Similarity=0.456 Sum_probs=240.8
Q ss_pred CeEEEEcCCChhhHHHHHHHHhC-CCeEEEEecCCCC-chhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCC
Q 019795 5 KNILVTGGAGFIGTHCALQLLQG-GFKVVLIDNLHNS-VPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKF 82 (335)
Q Consensus 5 ~~vlItGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~ 82 (335)
|+|||||||||||++|+++|++. |++|++++|.... .... +.++.. ..++.++.+|++|.+++.++++..++
T Consensus 1 MkvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~---~~~~~~---~~~~~~~~~Dl~d~~~~~~~~~~~~~ 74 (361)
T 1kew_A 1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLES---LSDISE---SNRYNFEHADICDSAEITRIFEQYQP 74 (361)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGG---GTTTTT---CTTEEEEECCTTCHHHHHHHHHHHCC
T ss_pred CEEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhh---hhhhhc---CCCeEEEECCCCCHHHHHHHHhhcCC
Confidence 37999999999999999999998 7999999986531 1111 111110 25788999999999999999976679
Q ss_pred CEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHc--CCC-------EEEEeccccccCCCCC--C--------C
Q 019795 83 EAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKY--NCK-------KLVFSSSATIYGQPEK--I--------P 143 (335)
Q Consensus 83 d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~-------~~v~~Ss~~vyg~~~~--~--------~ 143 (335)
|+|||+|+......+..+++..+++|+.++.+++++|.+. +++ +||++||.++||.... . +
T Consensus 75 d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~~~~~~ 154 (361)
T 1kew_A 75 DAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPL 154 (361)
T ss_dssp SEEEECCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCC
T ss_pred CEEEECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEEeCCHHHhCCCcccccccccccCCC
Confidence 9999999987655556778899999999999999999988 776 9999999999986542 1 7
Q ss_pred ccCCCCCCCCChhHHhHHHHHHHHHHHHhhCCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHH-HHHHHHhCCCCce
Q 019795 144 CVEDFPYGAMNPYGRTKQWCEEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMP-YIQQVAVGRHPEL 222 (335)
Q Consensus 144 ~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~ 222 (335)
++|+.+..|.+.|+.+|..+|.+++.++.++ +++++++||++|||+... ...+.+ ++.....+. + +
T Consensus 155 ~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~-gi~~~~vrp~~v~G~~~~----------~~~~~~~~~~~~~~~~-~-~ 221 (361)
T 1kew_A 155 FTETTAYAPSSPYSASKASSDHLVRAWRRTY-GLPTIVTNCSNNYGPYHF----------PEKLIPLVILNALEGK-P-L 221 (361)
T ss_dssp BCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH-CCCEEEEEECEEESTTCC----------TTSHHHHHHHHHHHTC-C-E
T ss_pred CCCCCCCCCCCccHHHHHHHHHHHHHHHHHh-CCcEEEEeeceeECCCCC----------cccHHHHHHHHHHcCC-C-c
Confidence 8899888899999999999999999988877 999999999999999532 123444 344444454 3 6
Q ss_pred eEecccCCCCCCceeeeeeeHhhhhc----------cCceEEecCCccccHHHHHHHHHHHhCCCCCc--------eeCC
Q 019795 223 NVYGQDYPTKDGSAVRDYIHVMDLAD----------GCIAYNLGNGKGISVLEMVAAFEKASGKKIPI--------KFCP 284 (335)
Q Consensus 223 ~~~g~~~~~~~~~~~~~~v~~~D~~~----------~~~~~nv~~~~~~s~~el~~~i~~~~g~~~~~--------~~~~ 284 (335)
.++| ++.+.++|+|++|+++ .+++||+++++.+|+.|+++.+.+.+|.+.+. ...+
T Consensus 222 ~~~~------~~~~~~~~i~v~Dva~a~~~~~~~~~~g~~~~v~~~~~~s~~e~~~~i~~~~g~~~~~~~p~~~~~~~~~ 295 (361)
T 1kew_A 222 PIYG------KGDQIRDWLYVEDHARALHMVVTEGKAGETYNIGGHNEKKNLDVVFTICDLLDEIVPKATSYREQITYVA 295 (361)
T ss_dssp EEET------TSCCEEEEEEHHHHHHHHHHHHHHCCTTCEEEECCCCEEEHHHHHHHHHHHHHHHSCCSSCGGGGEEEEC
T ss_pred eEcC------CCceeEeeEEHHHHHHHHHHHHhCCCCCCEEEecCCCeeeHHHHHHHHHHHhCCcCccccccccceeecC
Confidence 6777 7888999999999997 47799999999999999999999999865421 1222
Q ss_pred CCCCccceeeccHHHHHHhcCCccccCHHHHHHHHHHHHhcCC
Q 019795 285 RRVGDATAVYAATDKAHKELGWKPKYGIEDMCAHQWNWAKNNP 327 (335)
Q Consensus 285 ~~~~~~~~~~~d~~k~~~~Lg~~p~~~~~~~~~~~~~~~~~~~ 327 (335)
..+.......+|++|+++.|||+|+++++++|+++++|++++.
T Consensus 296 ~~~~~~~~~~~d~~k~~~~lG~~p~~~~~e~l~~~~~~~~~~~ 338 (361)
T 1kew_A 296 DRPGHDRRYAIDAGKISRELGWKPLETFESGIRKTVEWYLANT 338 (361)
T ss_dssp CCTTCCCBCCBCCHHHHHHHCCCCSCCHHHHHHHHHHHHHHCH
T ss_pred CCCcccceeecCHHHHHHHhCCCCccCHHHHHHHHHHHHHhcc
Confidence 2333334567899999999999999999999999999998863
|
| >1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.5e-45 Score=325.99 Aligned_cols=287 Identities=20% Similarity=0.312 Sum_probs=235.6
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCC
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQK 81 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~ 81 (335)
|++|+|||||||||||++|+++|+++|++|++++|+. .+|++|.+++.++++..+
T Consensus 1 M~~~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~~-------------------------~~D~~d~~~~~~~~~~~~ 55 (321)
T 1e6u_A 1 MAKQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD-------------------------ELNLLDSRAVHDFFASER 55 (321)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT-------------------------TCCTTCHHHHHHHHHHHC
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEecCc-------------------------cCCccCHHHHHHHHHhcC
Confidence 3467999999999999999999999999999887631 258999999999987557
Q ss_pred CCEEEEcccccc-hhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccCCCCCCCccCCC----CCCCC-Ch
Q 019795 82 FEAVIHFGALKA-VAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQPEKIPCVEDF----PYGAM-NP 155 (335)
Q Consensus 82 ~d~vi~~a~~~~-~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~----~~~~~-~~ 155 (335)
+|+|||+|+... ......+++..+++|+.++.+++++|++.+++++|++||.++||.....+++|++ +..|. +.
T Consensus 56 ~d~vih~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~ 135 (321)
T 1e6u_A 56 IDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEP 135 (321)
T ss_dssp CSEEEECCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGSCTTCCSSBCGGGTTSSCCCGGGHH
T ss_pred CCEEEEcCeecCCcchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccHHHcCCCCCCCcCccccccCCCCCCCCc
Confidence 999999999754 2234567788999999999999999999999999999999999987777888887 55554 58
Q ss_pred hHHhHHHHHHHHHHHHhhCCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHHH-HHHHh----CCCCceeEecccCC
Q 019795 156 YGRTKQWCEEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYI-QQVAV----GRHPELNVYGQDYP 230 (335)
Q Consensus 156 Y~~sK~~~E~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~~-~~~~~----~~~~~~~~~g~~~~ 230 (335)
|+.+|..+|++++.++++. +++++++||+++||+..... .....+++.+ ..+.. |..+ +.++|
T Consensus 136 Y~~sK~~~E~~~~~~~~~~-~~~~~ilrp~~v~G~~~~~~------~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~---- 203 (321)
T 1e6u_A 136 YAIAKIAGIKLCESYNRQY-GRDYRSVMPTNLYGPHDNFH------PSNSHVIPALLRRFHEATAQKAPD-VVVWG---- 203 (321)
T ss_dssp HHHHHHHHHHHHHHHHHHH-CCEEEEEEECEEESTTCCCC------TTCSSHHHHHHHHHHHHHHHTCSE-EEEES----
T ss_pred cHHHHHHHHHHHHHHHHHh-CCCEEEEEeCCcCCcCCCCC------CCCCccHHHHHHHHHHhhhcCCCc-eEEcC----
Confidence 9999999999999988776 99999999999999854311 0112344433 33332 2233 66777
Q ss_pred CCCCceeeeeeeHhhhhc----------c---------CceEEecCCccccHHHHHHHHHHHhCCCCCceeCCCCCCccc
Q 019795 231 TKDGSAVRDYIHVMDLAD----------G---------CIAYNLGNGKGISVLEMVAAFEKASGKKIPIKFCPRRVGDAT 291 (335)
Q Consensus 231 ~~~~~~~~~~v~~~D~~~----------~---------~~~~nv~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~ 291 (335)
++.+.++|+|++|+++ . +++||+++++.+|+.|+++.+.+.+|.+.++...+..+....
T Consensus 204 --~g~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~ 281 (321)
T 1e6u_A 204 --SGTPMREFLHVDDMAAASIHVMELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKGRVVFDASKPDGTP 281 (321)
T ss_dssp --CSCCEECEEEHHHHHHHHHHHHHSCHHHHHHTSBTTBCCEEESCSCCEEHHHHHHHHHHHHTCCSEEEEETTSCCCCS
T ss_pred --CCCEEEEeEEHHHHHHHHHHHHhCcccccccccccCCceEEeCCCCCccHHHHHHHHHHHhCCCCceEeCCCCCCCcc
Confidence 7889999999999997 2 489999999999999999999999998877666555555556
Q ss_pred eeeccHHHHHHhcCCccccCHHHHHHHHHHHHhcCCC
Q 019795 292 AVYAATDKAHKELGWKPKYGIEDMCAHQWNWAKNNPM 328 (335)
Q Consensus 292 ~~~~d~~k~~~~Lg~~p~~~~~~~~~~~~~~~~~~~~ 328 (335)
...+|++|+++ |||+|+++++++|+++++|++++..
T Consensus 282 ~~~~d~~k~~~-lG~~p~~~~~~~l~~~~~~~~~~~~ 317 (321)
T 1e6u_A 282 RKLLDVTRLHQ-LGWYHEISLEAGLASTYQWFLENQD 317 (321)
T ss_dssp BCCBCCHHHHH-TTCCCCCCHHHHHHHHHHHHHHTC-
T ss_pred cccCCHHHHHh-cCCccCCcHHHHHHHHHHHHHHHHH
Confidence 77899999998 9999999999999999999998764
|
| >2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-44 Score=326.35 Aligned_cols=304 Identities=19% Similarity=0.297 Sum_probs=237.6
Q ss_pred CeEEEEcCCChhhHHHHHHHHhC-CCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCC-HHHHHHHHhcCCC
Q 019795 5 KNILVTGGAGFIGTHCALQLLQG-GFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRN-KDDLDKLFSSQKF 82 (335)
Q Consensus 5 ~~vlItGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d-~~~~~~~~~~~~~ 82 (335)
|+|||||||||||++|+++|+++ |++|++++|+...... +.. ..++.++.+|++| .+.+.++++ ++
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~----~~~------~~~~~~~~~D~~~~~~~~~~~~~--~~ 68 (345)
T 2bll_A 1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISR----FLN------HPHFHFVEGDISIHSEWIEYHVK--KC 68 (345)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGG----GTT------CTTEEEEECCTTTCSHHHHHHHH--HC
T ss_pred CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHH----hhc------CCCeEEEeccccCcHHHHHhhcc--CC
Confidence 58999999999999999999998 8999999997543221 110 1578899999998 467888887 78
Q ss_pred CEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccCCCCCCCccCCCCC-------CCCCh
Q 019795 83 EAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQPEKIPCVEDFPY-------GAMNP 155 (335)
Q Consensus 83 d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~-------~~~~~ 155 (335)
|+|||+|+.........++...+++|+.++.+++++|++.+ +++|++||.++||.....+++|+.+. .|.+.
T Consensus 69 d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~v~~SS~~v~g~~~~~~~~e~~~~~~~~~~~~~~~~ 147 (345)
T 2bll_A 69 DVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR-KRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWI 147 (345)
T ss_dssp SEEEECBCCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTT-CEEEEECCGGGGBTCCCSSBCTTTCCCBCCCTTCGGGH
T ss_pred CEEEEcccccCccchhcCHHHHHHHHHHHHHHHHHHHHHhC-CeEEEEecHHHcCCCCCCCcCCcccccccCcccCcccc
Confidence 99999999865544456778899999999999999999988 89999999999998766678887653 34458
Q ss_pred hHHhHHHHHHHHHHHHhhCCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHH-HHHHHHhCCCCceeEecccCCCCCC
Q 019795 156 YGRTKQWCEEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMP-YIQQVAVGRHPELNVYGQDYPTKDG 234 (335)
Q Consensus 156 Y~~sK~~~E~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~ 234 (335)
|+.+|..+|++++.++++. +++++++||++|||+........ ......+++ ++..+..+. + +.++| ++
T Consensus 148 Y~~sK~~~e~~~~~~~~~~-~~~~~ilrp~~v~G~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~-~~~~~------~g 216 (345)
T 2bll_A 148 YSVSKQLLDRVIWAYGEKE-GLQFTLFRPFNWMGPRLDNLNAA--RIGSSRAITQLILNLVEGS-P-IKLID------GG 216 (345)
T ss_dssp HHHHHHHHHHHHHHHHHHH-CCCEEEEEECSEECSSCCCTTCS--BSCBCHHHHHHHHHHHHTC-C-EEEGG------GS
T ss_pred cHHHHHHHHHHHHHHHHhc-CCCEEEEcCCcccCCCccccccc--ccccccHHHHHHHHHHcCC-C-cEEEC------CC
Confidence 9999999999999988777 99999999999999964321100 000122333 444555554 3 56677 67
Q ss_pred ceeeeeeeHhhhhc-------------cCceEEecCCc-cccHHHHHHHHHHHhCCCCCceeCCCCC-------------
Q 019795 235 SAVRDYIHVMDLAD-------------GCIAYNLGNGK-GISVLEMVAAFEKASGKKIPIKFCPRRV------------- 287 (335)
Q Consensus 235 ~~~~~~v~~~D~~~-------------~~~~~nv~~~~-~~s~~el~~~i~~~~g~~~~~~~~~~~~------------- 287 (335)
.+.++|+|++|+++ .+++||+++++ .+|+.|+++.+.+.+|.+......+...
T Consensus 217 ~~~~~~i~v~Dva~a~~~~~~~~~~~~~g~~~~i~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (345)
T 2bll_A 217 KQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVESSSYYGK 296 (345)
T ss_dssp CCEEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECCTTSEEEHHHHHHHHHHHHHTCTTGGGSCCCCCEEEC--------
T ss_pred CEEEEEEEHHHHHHHHHHHHhhccccCCCceEEeCCCCCCCCHHHHHHHHHHHhCCCcccccCccccccccccchhhccc
Confidence 88999999999987 25799999886 8999999999999998765433322211
Q ss_pred --CccceeeccHHHHHHhcCCccccCHHHHHHHHHHHHhcCCCCccc
Q 019795 288 --GDATAVYAATDKAHKELGWKPKYGIEDMCAHQWNWAKNNPMGYQT 332 (335)
Q Consensus 288 --~~~~~~~~d~~k~~~~Lg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 332 (335)
.+.....+|++|+++.|||+|+++++++|+++++|++++.....|
T Consensus 297 ~~~~~~~~~~d~~k~~~~lG~~p~~~l~~~l~~~~~~~~~~~~~~~~ 343 (345)
T 2bll_A 297 GYQDVEHRKPSIRNAHRCLDWEPKIDMQETIDETLDFFLRTVDLTDK 343 (345)
T ss_dssp ----CCCCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHSCTTC-
T ss_pred cccchhhhcccHHHHHHhcCCCccccHHHHHHHHHHHHHHcCCCCCC
Confidence 123456789999999999999999999999999999987654443
|
| >1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-44 Score=330.15 Aligned_cols=309 Identities=23% Similarity=0.323 Sum_probs=238.8
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCch-hhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCC
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVP-EAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKF 82 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~ 82 (335)
||+|||||||||||++++++|+++|++|++++|+..... .....+.... .....++.++.+|++|.+++.++++..++
T Consensus 1 m~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 79 (372)
T 1db3_A 1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDP-HTCNPKFHLHYGDLSDTSNLTRILREVQP 79 (372)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC----------------------CCEEECCCCSSCHHHHHHHHHHHCC
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccchHHHHHHhhcc-ccCCCceEEEECCCCCHHHHHHHHHhcCC
Confidence 579999999999999999999999999999998754311 1111111000 00014688999999999999999985568
Q ss_pred CEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCC---CEEEEeccccccCCCCCCCccCCCCCCCCChhHHh
Q 019795 83 EAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNC---KKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRT 159 (335)
Q Consensus 83 d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~---~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~Y~~s 159 (335)
|+|||+|+......+.+++...+++|+.++.+++++|++.++ ++||++||.++||.....+++|+.+..|.+.|+.+
T Consensus 80 d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~SS~~v~g~~~~~~~~E~~~~~~~~~Y~~s 159 (372)
T 1db3_A 80 DEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVA 159 (372)
T ss_dssp SEEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTCCSSSBCTTSCCCCCSHHHHH
T ss_pred CEEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCChhhhCCCCCCCCCccCCCCCCChHHHH
Confidence 999999998655455667888999999999999999999887 79999999999998777789999999999999999
Q ss_pred HHHHHHHHHHHHhhCCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHHHhCCCCceeEecccCCCCCCceeee
Q 019795 160 KQWCEEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAVRD 239 (335)
Q Consensus 160 K~~~E~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 239 (335)
|..+|.+++.++.++ +++++++|++++|||... .......+..++..+..+..+ +..+| ++.+.++
T Consensus 160 K~~~e~~~~~~~~~~-~~~~~~~r~~~~~gp~~~------~~~~~~~~~~~~~~~~~g~~~-~~~~g------~~~~~~~ 225 (372)
T 1db3_A 160 KLYAYWITVNYRESY-GMYACNGILFNHESPRRG------ETFVTRKITRAIANIAQGLES-CLYLG------NMDSLRD 225 (372)
T ss_dssp HHHHHHHHHHHHHHH-CCCEEEEEECCEECTTSC------TTSHHHHHHHHHHHHHTTSCC-CEEES------CTTCEEC
T ss_pred HHHHHHHHHHHHHHh-CCCeEEEEECCccCCCCC------CcchhhHHHHHHHHHHcCCCC-ceeec------CCCceee
Confidence 999999999988877 899999999999998532 100011122344455556544 34567 7889999
Q ss_pred eeeHhhhhc---------cCceEEecCCccccHHHHHHHHHHHhCCCCCcee----------------------------
Q 019795 240 YIHVMDLAD---------GCIAYNLGNGKGISVLEMVAAFEKASGKKIPIKF---------------------------- 282 (335)
Q Consensus 240 ~v~~~D~~~---------~~~~~nv~~~~~~s~~el~~~i~~~~g~~~~~~~---------------------------- 282 (335)
|+|++|+++ .+++||+++++.+|+.|+++.+.+.+|.+.++..
T Consensus 226 ~i~v~Dva~a~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 305 (372)
T 1db3_A 226 WGHAKDYVKMQWMMLQQEQPEDFVIATGVQYSVRQFVEMAAAQLGIKLRFEGTGVEEKGIVVSVTGHDAPGVKPGDVIIA 305 (372)
T ss_dssp CEEHHHHHHHHHHTTSSSSCCCEEECCCCCEEHHHHHHHHHHTTTEEEEEESCGGGCEEEEEEECSSSCTTCCTTCEEEE
T ss_pred eeEHHHHHHHHHHHHhcCCCceEEEcCCCceeHHHHHHHHHHHhCCCcccccccccccccccccccccccccccccceee
Confidence 999999987 3579999999999999999999999987543210
Q ss_pred -CC--CCCCccceeeccHHHHHHhcCCccccCHHHHHHHHHHHHhcCC
Q 019795 283 -CP--RRVGDATAVYAATDKAHKELGWKPKYGIEDMCAHQWNWAKNNP 327 (335)
Q Consensus 283 -~~--~~~~~~~~~~~d~~k~~~~Lg~~p~~~~~~~~~~~~~~~~~~~ 327 (335)
.+ ..+.+.....+|++|+++.|||+|+++++++|+++++|++++.
T Consensus 306 ~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~~ 353 (372)
T 1db3_A 306 VDPRYFRPAEVETLLGDPTKAHEKLGWKPEITLREMVSEMVANDLEAA 353 (372)
T ss_dssp ECGGGCCCCC-CCCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHHH
T ss_pred ccccccCCCchhhhccCHHHHHHHhCCccccCHHHHHHHHHHHHHHhh
Confidence 01 1223334567899999999999999999999999999998753
|
| >1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-44 Score=330.79 Aligned_cols=313 Identities=26% Similarity=0.330 Sum_probs=237.7
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCch----------------hhHHhhhhhcCCccccceeEEEcc
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVP----------------EAVDRVKDLAGPELAKKLEFHVGD 66 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~----------------~~~~~~~~~~~~~~~~~i~~~~~D 66 (335)
+|++|||||||||||++|+++|+++|++|++++|...... +....+.... ..++.++.+|
T Consensus 10 ~~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~----~~~v~~~~~D 85 (404)
T 1i24_A 10 HGSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALT----GKSIELYVGD 85 (404)
T ss_dssp --CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHH----CCCCEEEESC
T ss_pred CCCeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEecCccccccccccccccccchhhhhhhhHhhcc----CCceEEEECC
Confidence 5789999999999999999999999999999988532110 0111111111 1578899999
Q ss_pred CCCHHHHHHHHhcCCCCEEEEcccccchhhhhcChH---HHHHHhHHHHHHHHHHHHHcCC-CEEEEeccccccCCCCCC
Q 019795 67 LRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPF---RYFDNNLIGTINLYQAMAKYNC-KKLVFSSSATIYGQPEKI 142 (335)
Q Consensus 67 l~d~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~---~~~~~nv~~~~~l~~~~~~~~~-~~~v~~Ss~~vyg~~~~~ 142 (335)
++|.+++.++++..++|+|||+|+.........+++ ..+++|+.++.+++++|++.++ ++||++||.++||... .
T Consensus 86 l~d~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~~~V~~SS~~vyg~~~-~ 164 (404)
T 1i24_A 86 ICDFEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMGEYGTPN-I 164 (404)
T ss_dssp TTSHHHHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGGCCCS-S
T ss_pred CCCHHHHHHHHhccCCCEEEECCCCCCccchhhCccchhhhHHHHHHHHHHHHHHHHHhCCCcEEEEeCcHHHhCCCC-C
Confidence 999999999998445999999999865443333443 4789999999999999999887 5999999999998764 4
Q ss_pred CccCC--------------CCCCCCChhHHhHHHHHHHHHHHHhhCCCCeEEEEecccccCCCCCCCC-------CCCCC
Q 019795 143 PCVED--------------FPYGAMNPYGRTKQWCEEIAFDVQKADPEWRIILLRYFNPVGAHESGKL-------GEDPK 201 (335)
Q Consensus 143 ~~~e~--------------~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~-------g~~~~ 201 (335)
+++|+ .+..|.+.|+.||.++|++++.++.++ +++++++||++|||+...... .....
T Consensus 165 ~~~E~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~-gi~~~ivrp~~v~Gp~~~~~~~~~~~~~~~~~~ 243 (404)
T 1i24_A 165 DIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW-GIRATDLNQGVVYGVKTDETEMHEELRNRLDYD 243 (404)
T ss_dssp CBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHH-CCEEEEEEECEEECSCCTTGGGSGGGCCCCCCS
T ss_pred CCCccccccccccccccccCCCCCCChhHHHHHHHHHHHHHHHHhc-CCeEEEEecceeeCCCCCccccccccccccccc
Confidence 56665 466778899999999999999888777 999999999999999643100 00000
Q ss_pred CCCCChHH-HHHHHHhCCCCceeEecccCCCCCCceeeeeeeHhhhhc-----------cC--ceEEecCCccccHHHHH
Q 019795 202 GIPNNLMP-YIQQVAVGRHPELNVYGQDYPTKDGSAVRDYIHVMDLAD-----------GC--IAYNLGNGKGISVLEMV 267 (335)
Q Consensus 202 ~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~v~~~D~~~-----------~~--~~~nv~~~~~~s~~el~ 267 (335)
+....+++ ++..+..+. + +.++| ++.+.++|+|++|+|+ .+ ++||+++ +.+|+.|++
T Consensus 244 ~~~~~~~~~~~~~~~~g~-~-~~~~g------~g~~~~~~i~v~Dva~a~~~~l~~~~~~g~~~~yni~~-~~~s~~e~~ 314 (404)
T 1i24_A 244 AVFGTALNRFCVQAAVGH-P-LTVYG------KGGQTRGYLDIRDTVQCVEIAIANPAKAGEFRVFNQFT-EQFSVNELA 314 (404)
T ss_dssp TTTCCHHHHHHHHHHHTC-C-EEEET------TSCCEEEEEEHHHHHHHHHHHHHSCCCTTCEEEEEECS-EEEEHHHHH
T ss_pred cchhhHHHHHHHHHHcCC-e-eEEeC------CCCceECcEEHHHHHHHHHHHHhCcccCCCceEEEECC-CCCcHHHHH
Confidence 10022344 455555554 4 66777 7888999999999987 14 5999988 899999999
Q ss_pred HHHHHH---hCCCCCceeCCCCCC--ccceeeccHHHHHHhcCCccccCHHHHHHHHHHHHhcCCCCcc
Q 019795 268 AAFEKA---SGKKIPIKFCPRRVG--DATAVYAATDKAHKELGWKPKYGIEDMCAHQWNWAKNNPMGYQ 331 (335)
Q Consensus 268 ~~i~~~---~g~~~~~~~~~~~~~--~~~~~~~d~~k~~~~Lg~~p~~~~~~~~~~~~~~~~~~~~~~~ 331 (335)
+.+.+. +|.+.++...|.... ......+|++|++ .|||+|+++++++++++++|++.....+.
T Consensus 315 ~~i~~~~~~~g~~~~~~~~p~~~~~~~~~~~~~d~~k~~-~LG~~p~~~~~~~l~~~~~~~~~~~~~~~ 382 (404)
T 1i24_A 315 SLVTKAGSKLGLDVKKMTVPNPRVEAEEHYYNAKHTKLM-ELGLEPHYLSDSLLDSLLNFAVQFKDRVD 382 (404)
T ss_dssp HHHHHHHHTTTCCCCEEEECCSSCSCSSCCCCBCCCHHH-HTTCCCCCCCHHHHHHHHHHHHHTGGGCC
T ss_pred HHHHHHHHhhCCCccccccCcccCccccceEecCHHHHH-HcCCCcCcCHHHHHHHHHHHHHhhhhccC
Confidence 999998 787776655554332 2345678999997 79999999999999999999987766544
|
| >3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-44 Score=317.71 Aligned_cols=269 Identities=17% Similarity=0.164 Sum_probs=229.3
Q ss_pred CC-eEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCC
Q 019795 4 EK-NILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKF 82 (335)
Q Consensus 4 ~~-~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~ 82 (335)
|| +|||||||||||+++++.|+++|++|++++|. .+|++|.+.+.++++..++
T Consensus 4 M~m~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~--------------------------~~D~~d~~~~~~~~~~~~~ 57 (287)
T 3sc6_A 4 MKERVIITGANGQLGKQLQEELNPEEYDIYPFDKK--------------------------LLDITNISQVQQVVQEIRP 57 (287)
T ss_dssp -CEEEEEESTTSHHHHHHHHHSCTTTEEEEEECTT--------------------------TSCTTCHHHHHHHHHHHCC
T ss_pred ceeEEEEECCCCHHHHHHHHHHHhCCCEEEEeccc--------------------------ccCCCCHHHHHHHHHhcCC
Confidence 44 99999999999999999999999999999881 2689999999999986679
Q ss_pred CEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccCCCCCCCccCCCCCCCCChhHHhHHH
Q 019795 83 EAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQW 162 (335)
Q Consensus 83 d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~Y~~sK~~ 162 (335)
|+|||+|+......+..++...+++|+.++.+++++|++.++ ++||+||.++||.....+++|+++..|.+.|+.+|..
T Consensus 58 d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~v~~SS~~vy~~~~~~~~~E~~~~~p~~~Y~~sK~~ 136 (287)
T 3sc6_A 58 HIIIHCAAYTKVDQAEKERDLAYVINAIGARNVAVASQLVGA-KLVYISTDYVFQGDRPEGYDEFHNPAPINIYGASKYA 136 (287)
T ss_dssp SEEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGSCCCCSSCBCTTSCCCCCSHHHHHHHH
T ss_pred CEEEECCcccChHHHhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEchhhhcCCCCCCCCCCCCCCCCCCHHHHHHHH
Confidence 999999999776666678899999999999999999999987 7999999999998888899999999999999999999
Q ss_pred HHHHHHHHHhhCCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHHHhCCCCceeEecccCCCCCCceeeeeee
Q 019795 163 CEEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAVRDYIH 242 (335)
Q Consensus 163 ~E~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~v~ 242 (335)
+|++++.+ ..+++++||+++||+.. ..+.+.+......+.+ +.+.| ++.++|+|
T Consensus 137 ~E~~~~~~-----~~~~~ilR~~~v~G~~~------------~~~~~~~~~~~~~~~~-~~~~~--------~~~~~~i~ 190 (287)
T 3sc6_A 137 GEQFVKEL-----HNKYFIVRTSWLYGKYG------------NNFVKTMIRLGKEREE-ISVVA--------DQIGSPTY 190 (287)
T ss_dssp HHHHHHHH-----CSSEEEEEECSEECSSS------------CCHHHHHHHHHTTCSE-EEEEC--------SCEECCEE
T ss_pred HHHHHHHh-----CCCcEEEeeeeecCCCC------------CcHHHHHHHHHHcCCC-eEeec--------CcccCceE
Confidence 99999876 33679999999999842 2355655555554444 66655 37899999
Q ss_pred Hhhhhc---------cCceEEecCCccccHHHHHHHHHHHhCCCCCceeCC-----CCCCccceeeccHHHHHHhcCCcc
Q 019795 243 VMDLAD---------GCIAYNLGNGKGISVLEMVAAFEKASGKKIPIKFCP-----RRVGDATAVYAATDKAHKELGWKP 308 (335)
Q Consensus 243 ~~D~~~---------~~~~~nv~~~~~~s~~el~~~i~~~~g~~~~~~~~~-----~~~~~~~~~~~d~~k~~~~Lg~~p 308 (335)
++|+++ .+++||+++++.+|+.|+++.+.+.+|.+..+...+ ..........+|++|++ .|||+|
T Consensus 191 v~Dva~~~~~~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~-~lg~~p 269 (287)
T 3sc6_A 191 VADLNVMINKLIHTSLYGTYHVSNTGSCSWFEFAKKIFSYANMKVNVLPVSTEEFGAAAARPKYSIFQHNMLR-LNGFLQ 269 (287)
T ss_dssp HHHHHHHHHHHHTSCCCEEEECCCBSCEEHHHHHHHHHHHHTCCCEEEEECHHHHCCSSCCCSBCCBCCHHHH-HTTCCC
T ss_pred HHHHHHHHHHHHhCCCCCeEEEcCCCcccHHHHHHHHHHHcCCCcceeeeehhhcCcccCCCCcccccHHHHH-hhCCCC
Confidence 999998 478999999999999999999999999887665443 23344567789999998 999999
Q ss_pred ccCHHHHHHHHHHHHhcC
Q 019795 309 KYGIEDMCAHQWNWAKNN 326 (335)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~ 326 (335)
.++++++|+++++|++++
T Consensus 270 ~~~~~~~l~~~~~~~~~~ 287 (287)
T 3sc6_A 270 MPSWEEGLERFFIETKSH 287 (287)
T ss_dssp CCBHHHHHHHHHHHTC--
T ss_pred CccHHHHHHHHHHHHhcC
Confidence 999999999999999764
|
| >2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-44 Score=321.09 Aligned_cols=291 Identities=16% Similarity=0.196 Sum_probs=234.1
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhC--CCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCC
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQG--GFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQK 81 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~ 81 (335)
+|+|||||||||||++|+++|+++ |++|++++|+..... . . .++.++.+|++|.+++.++++..+
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-~----~--------~~~~~~~~D~~d~~~~~~~~~~~~ 68 (312)
T 2yy7_A 2 NPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTD-V----V--------NSGPFEVVNALDFNQIEHLVEVHK 68 (312)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCH-H----H--------HSSCEEECCTTCHHHHHHHHHHTT
T ss_pred CceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCcccc-c----c--------CCCceEEecCCCHHHHHHHHhhcC
Confidence 578999999999999999999998 899999999765421 1 1 356789999999999999998667
Q ss_pred CCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccCCCC-CCCccCCCCCCCCChhHHhH
Q 019795 82 FEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQPE-KIPCVEDFPYGAMNPYGRTK 160 (335)
Q Consensus 82 ~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~-~~~~~e~~~~~~~~~Y~~sK 160 (335)
+|+|||+|+.... ....+++..+++|+.++.+++++|++.+++++|++||.++||... ..+.+|+.+..|.+.|+.+|
T Consensus 69 ~d~vih~a~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~~~Y~~sK 147 (312)
T 2yy7_A 69 ITDIYLMAALLSA-TAEKNPAFAWDLNMNSLFHVLNLAKAKKIKKIFWPSSIAVFGPTTPKENTPQYTIMEPSTVYGISK 147 (312)
T ss_dssp CCEEEECCCCCHH-HHHHCHHHHHHHHHHHHHHHHHHHHTTSCSEEECCEEGGGCCTTSCSSSBCSSCBCCCCSHHHHHH
T ss_pred CCEEEECCccCCC-chhhChHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHHhCCCCCCCCccccCcCCCCchhHHHH
Confidence 9999999998543 234677889999999999999999999989999999999998753 35788888888999999999
Q ss_pred HHHHHHHHHHHhhCCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHHHhCCCCceeEecccCCCCCCceeeee
Q 019795 161 QWCEEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAVRDY 240 (335)
Q Consensus 161 ~~~E~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 240 (335)
..+|++++.++.++ +++++++||+++||+...+. ......+.+.+...+.++. +.+++ ++.+.++|
T Consensus 148 ~~~e~~~~~~~~~~-~~~~~~lrp~~v~g~~~~~~-----~~~~~~~~~~~~~~~~~~~--~~~~~------~~~~~~~~ 213 (312)
T 2yy7_A 148 QAGERWCEYYHNIY-GVDVRSIRYPGLISWSTPPG-----GGTTDYAVDIFYKAIADKK--YECFL------SSETKMPM 213 (312)
T ss_dssp HHHHHHHHHHHHHH-CCEEECEEECEEECSSSCCC-----SCTTTHHHHHHHHHHHTSE--EEESS------CTTCCEEE
T ss_pred HHHHHHHHHHHHhc-CCcEEEEeCCeEecCCCCCC-----CchhhhHHHHHHHHHcCCC--eEEec------CCCceeee
Confidence 99999999888777 99999999999999853211 0011234555555555543 45666 67888999
Q ss_pred eeHhhhhc----------c----CceEEecCCccccHHHHHHHHHHHhCCCCCceeCCCCCCc---cceeeccHHHHHHh
Q 019795 241 IHVMDLAD----------G----CIAYNLGNGKGISVLEMVAAFEKASGKKIPIKFCPRRVGD---ATAVYAATDKAHKE 303 (335)
Q Consensus 241 v~~~D~~~----------~----~~~~nv~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~---~~~~~~d~~k~~~~ 303 (335)
+|++|+++ . +++||+++ +.+|+.|+++.+.+.+|. ..+.+.+..... .....+|++|+++.
T Consensus 214 i~v~Dva~a~~~~~~~~~~~~~~~~~~ni~~-~~~s~~e~~~~i~~~~~~-~~i~~~~~~~~~~~~~~~~~~d~~k~~~~ 291 (312)
T 2yy7_A 214 MYMDDAIDATINIMKAPVEKIKIHSSYNLAA-MSFTPTEIANEIKKHIPE-FTITYEPDFRQKIADSWPASIDDSQARED 291 (312)
T ss_dssp EEHHHHHHHHHHHHHSCGGGCCCSSCEECCS-EEECHHHHHHHHHTTCTT-CEEEECCCTHHHHHTTSCSSBCCHHHHHH
T ss_pred eeHHHHHHHHHHHHhCcccccccCceEEeCC-CccCHHHHHHHHHHHCCC-CceEeccCccccccccccccCCHHHHHHH
Confidence 99999987 1 27999985 899999999999999983 333333321111 12347899999999
Q ss_pred cCCccccCHHHHHHHHHHHHh
Q 019795 304 LGWKPKYGIEDMCAHQWNWAK 324 (335)
Q Consensus 304 Lg~~p~~~~~~~~~~~~~~~~ 324 (335)
|||+|+++++++|+++++|++
T Consensus 292 lG~~p~~~l~~~l~~~~~~~k 312 (312)
T 2yy7_A 292 WDWKHTFDLESMTKDMIEHLS 312 (312)
T ss_dssp HCCCCCCCHHHHHHHHHHHHC
T ss_pred cCCCCCCCHHHHHHHHHHHhC
Confidence 999999999999999999985
|
| >1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-44 Score=329.09 Aligned_cols=308 Identities=19% Similarity=0.225 Sum_probs=241.1
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCch-hhHHhhhhhcCCcccc-ceeEEEccCCCHHHHHHHHhcCC
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVP-EAVDRVKDLAGPELAK-KLEFHVGDLRNKDDLDKLFSSQK 81 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~-~i~~~~~Dl~d~~~~~~~~~~~~ 81 (335)
+|+|||||||||||++|+++|+++|++|++++|+..... .....+..... .... ++.++.+|++|.+++.++++..+
T Consensus 28 ~k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~Dl~d~~~~~~~~~~~~ 106 (381)
T 1n7h_A 28 RKIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPH-NVNKALMKLHYADLTDASSLRRWIDVIK 106 (381)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC---------CCEEEEECCTTCHHHHHHHHHHHC
T ss_pred CCeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCccccchhhhhhhhccc-cccccceEEEECCCCCHHHHHHHHHhcC
Confidence 379999999999999999999999999999999765411 00111100000 0012 68899999999999999998556
Q ss_pred CCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCC-----EEEEeccccccCCCCCCCccCCCCCCCCChh
Q 019795 82 FEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCK-----KLVFSSSATIYGQPEKIPCVEDFPYGAMNPY 156 (335)
Q Consensus 82 ~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~-----~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~Y 156 (335)
+|+|||+|+......+..+++..+++|+.++.+++++|++.+++ +||++||.++||.... +++|+.+..|.+.|
T Consensus 107 ~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~~~~~~v~~SS~~vyg~~~~-~~~E~~~~~~~~~Y 185 (381)
T 1n7h_A 107 PDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPP-PQSETTPFHPRSPY 185 (381)
T ss_dssp CSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCS-SBCTTSCCCCCSHH
T ss_pred CCEEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhCCccCCccEEEEeCcHHHhCCCCC-CCCCCCCCCCCCch
Confidence 89999999987655556778899999999999999999887654 9999999999998766 89999999999999
Q ss_pred HHhHHHHHHHHHHHHhhCCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHHHhCCCCceeEecccCCCCCCce
Q 019795 157 GRTKQWCEEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSA 236 (335)
Q Consensus 157 ~~sK~~~E~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 236 (335)
+.+|..+|.+++.++.++ +++++++|++++|||... .......+..++..+..+... ...+| ++.+
T Consensus 186 ~~sK~~~E~~~~~~~~~~-~~~~~~~r~~~~~gp~~~------~~~~~~~~~~~~~~~~~g~~~-~~~~g------~~~~ 251 (381)
T 1n7h_A 186 AASKCAAHWYTVNYREAY-GLFACNGILFNHESPRRG------ENFVTRKITRALGRIKVGLQT-KLFLG------NLQA 251 (381)
T ss_dssp HHHHHHHHHHHHHHHHHH-CCEEEEEEECCEECTTSC------TTSHHHHHHHHHHHHHHTSCC-CEEES------CTTC
T ss_pred HHHHHHHHHHHHHHHHHh-CCcEEEEEeCceeCCCCC------CcchhHHHHHHHHHHHcCCCC-eEEeC------CCCc
Confidence 999999999999988877 899999999999998532 100001122334455556543 33456 6788
Q ss_pred eeeeeeHhhhhc---------cCceEEecCCccccHHHHHHHHHHHhCCCCC--ceeCC--CCCCccceeeccHHHHHHh
Q 019795 237 VRDYIHVMDLAD---------GCIAYNLGNGKGISVLEMVAAFEKASGKKIP--IKFCP--RRVGDATAVYAATDKAHKE 303 (335)
Q Consensus 237 ~~~~v~~~D~~~---------~~~~~nv~~~~~~s~~el~~~i~~~~g~~~~--~~~~~--~~~~~~~~~~~d~~k~~~~ 303 (335)
.++|+|++|+++ .+++||+++++.+|+.|+++.+.+.+|.+.+ +...+ ..+.+.....+|++|+++.
T Consensus 252 ~~~~v~v~Dva~a~~~~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~ 331 (381)
T 1n7h_A 252 SRDWGFAGDYVEAMWLMLQQEKPDDYVVATEEGHTVEEFLDVSFGYLGLNWKDYVEIDQRYFRPAEVDNLQGDASKAKEV 331 (381)
T ss_dssp EEECEEHHHHHHHHHHHHTSSSCCEEEECCSCEEEHHHHHHHHHHHTTCCGGGTEEECGGGSCSSCCCBCCBCCHHHHHH
T ss_pred eeeeEEHHHHHHHHHHHHhCCCCCeEEeeCCCCCcHHHHHHHHHHHcCCCcccccccCcccCCccccccccCCHHHHHHh
Confidence 999999999997 3589999999999999999999999997642 22221 1233445677899999999
Q ss_pred cCCccccCHHHHHHHHHHHHhcCC
Q 019795 304 LGWKPKYGIEDMCAHQWNWAKNNP 327 (335)
Q Consensus 304 Lg~~p~~~~~~~~~~~~~~~~~~~ 327 (335)
|||+|+++++++|+++++|++++.
T Consensus 332 lG~~p~~~l~e~l~~~~~~~~~~~ 355 (381)
T 1n7h_A 332 LGWKPQVGFEKLVKMMVDEDLELA 355 (381)
T ss_dssp HCCCCCSCHHHHHHHHHHHHHHHH
T ss_pred cCCcccCCHHHHHHHHHHHHHhhc
Confidence 999999899999999999998753
|
| >2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-42 Score=314.09 Aligned_cols=285 Identities=16% Similarity=0.208 Sum_probs=224.4
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCC
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKF 82 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~ 82 (335)
++|+|||||||||||++|+++|+++|++|++++|+...... +.+ .++.++.+|++|.+++.++++ ++
T Consensus 12 ~~M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----l~~-------~~~~~~~~Dl~d~~~~~~~~~--~~ 78 (342)
T 2x4g_A 12 AHVKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQR----LAY-------LEPECRVAEMLDHAGLERALR--GL 78 (342)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGG----GGG-------GCCEEEECCTTCHHHHHHHTT--TC
T ss_pred cCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhh----hcc-------CCeEEEEecCCCHHHHHHHHc--CC
Confidence 34689999999999999999999999999999997654322 111 368899999999999999998 79
Q ss_pred CEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccCCCCC--CCccCCCCCCC----CChh
Q 019795 83 EAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQPEK--IPCVEDFPYGA----MNPY 156 (335)
Q Consensus 83 d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~--~~~~e~~~~~~----~~~Y 156 (335)
|+|||+|+... .+..+++..+++|+.++.+++++|++.++++||++||.++|+.... .+ +|+.+..| .+.|
T Consensus 79 d~vih~a~~~~--~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~-~E~~~~~p~~~~~~~Y 155 (342)
T 2x4g_A 79 DGVIFSAGYYP--SRPRRWQEEVASALGQTNPFYAACLQARVPRILYVGSAYAMPRHPQGLPG-HEGLFYDSLPSGKSSY 155 (342)
T ss_dssp SEEEEC--------------CHHHHHHHHHHHHHHHHHHHTCSCEEEECCGGGSCCCTTSSCB-CTTCCCSSCCTTSCHH
T ss_pred CEEEECCccCc--CCCCCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHHhhCcCCCCCCC-CCCCCCCccccccChH
Confidence 99999999743 2345667899999999999999999999999999999999987644 44 89888888 8899
Q ss_pred HHhHHHHHHHHHHHHhhCCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHHHhCCCCceeEecccCCCCCCce
Q 019795 157 GRTKQWCEEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSA 236 (335)
Q Consensus 157 ~~sK~~~E~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 236 (335)
+.+|..+|++++.++.. +++++++||+++||+... . +. +..++..+..+... .+ | ..
T Consensus 156 ~~sK~~~e~~~~~~~~~--g~~~~ilrp~~v~g~~~~-----~----~~-~~~~~~~~~~~~~~--~~-~--------~~ 212 (342)
T 2x4g_A 156 VLCKWALDEQAREQARN--GLPVVIGIPGMVLGELDI-----G----PT-TGRVITAIGNGEMT--HY-V--------AG 212 (342)
T ss_dssp HHHHHHHHHHHHHHHHT--TCCEEEEEECEEECSCCS-----S----CS-TTHHHHHHHTTCCC--EE-E--------CC
T ss_pred HHHHHHHHHHHHHHhhc--CCcEEEEeCCceECCCCc-----c----cc-HHHHHHHHHcCCCc--cc-c--------CC
Confidence 99999999999988764 899999999999998531 0 11 23345555555443 22 3 35
Q ss_pred eeeeeeHhhhhc----------cCceEEecCCccccHHHHHHHHHHHhCCCCCceeCCCCC-------------------
Q 019795 237 VRDYIHVMDLAD----------GCIAYNLGNGKGISVLEMVAAFEKASGKKIPIKFCPRRV------------------- 287 (335)
Q Consensus 237 ~~~~v~~~D~~~----------~~~~~nv~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~------------------- 287 (335)
.++|+|++|+++ .+++||+++++ +|+.|+++.+.+.+|.+.++ ..+...
T Consensus 213 ~~~~i~v~Dva~~~~~~~~~~~~g~~~~v~~~~-~s~~e~~~~i~~~~g~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~ 290 (342)
T 2x4g_A 213 QRNVIDAAEAGRGLLMALERGRIGERYLLTGHN-LEMADLTRRIAELLGQPAPQ-PMSMAMARALATLGRLRYRVSGQLP 290 (342)
T ss_dssp EEEEEEHHHHHHHHHHHHHHSCTTCEEEECCEE-EEHHHHHHHHHHHHTCCCCE-EECHHHHHHHHHHHHC---------
T ss_pred CcceeeHHHHHHHHHHHHhCCCCCceEEEcCCc-ccHHHHHHHHHHHhCCCCCC-cCCHHHHHHHHHHHHHHHHhhCCCC
Confidence 789999999997 37899999998 99999999999999987664 333210
Q ss_pred ---Cc-----cceeeccHHHHHHhcCC-ccccCHHHHHHHHHHHHhcCCCC
Q 019795 288 ---GD-----ATAVYAATDKAHKELGW-KPKYGIEDMCAHQWNWAKNNPMG 329 (335)
Q Consensus 288 ---~~-----~~~~~~d~~k~~~~Lg~-~p~~~~~~~~~~~~~~~~~~~~~ 329 (335)
.+ .....+|++|+++.||| +| ++++++++++++|+++++..
T Consensus 291 ~~~~~~~~~~~~~~~~d~~k~~~~lG~~~p-~~~~~~l~~~~~~~~~~g~~ 340 (342)
T 2x4g_A 291 LLDETAIEVMAGGQFLDGRKAREELGFFST-TALDDTLLRAIDWFRDNGYF 340 (342)
T ss_dssp -------CCTTCCCCBCCHHHHHHHCCCCC-SCHHHHHHHHHHHHHHTTCC
T ss_pred CCCHHHHHHHhcCcccChHHHHHhCCCCCC-CCHHHHHHHHHHHHHHcCCC
Confidence 01 23567899999999999 99 79999999999999998753
|
| >3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} | Back alignment and structure |
|---|
Probab=100.00 E-value=8e-44 Score=314.97 Aligned_cols=268 Identities=18% Similarity=0.169 Sum_probs=221.1
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCC
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQK 81 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~ 81 (335)
|+||+||||| +||||++|+++|+++|++|++++|+.... +.++.++.+|++|.+++.++++. +
T Consensus 1 M~~~~ilVtG-aG~iG~~l~~~L~~~g~~V~~~~r~~~~~---------------~~~~~~~~~Dl~d~~~~~~~~~~-~ 63 (286)
T 3gpi_A 1 MSLSKILIAG-CGDLGLELARRLTAQGHEVTGLRRSAQPM---------------PAGVQTLIADVTRPDTLASIVHL-R 63 (286)
T ss_dssp -CCCCEEEEC-CSHHHHHHHHHHHHTTCCEEEEECTTSCC---------------CTTCCEEECCTTCGGGCTTGGGG-C
T ss_pred CCCCcEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCcccc---------------ccCCceEEccCCChHHHHHhhcC-C
Confidence 4578999999 59999999999999999999999976542 15788999999999999998872 4
Q ss_pred CCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccCCCCCCCccCCCCCCCCChhHHhHH
Q 019795 82 FEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQ 161 (335)
Q Consensus 82 ~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~Y~~sK~ 161 (335)
+|+|||+|+.. ..+++..+++|+.++.+++++|++.++++|||+||.++||.....+++|+++..|.+.|+.+|.
T Consensus 64 ~d~vih~a~~~-----~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~ 138 (286)
T 3gpi_A 64 PEILVYCVAAS-----EYSDEHYRLSYVEGLRNTLSALEGAPLQHVFFVSSTGVYGQEVEEWLDEDTPPIAKDFSGKRML 138 (286)
T ss_dssp CSEEEECHHHH-----HHC-----CCSHHHHHHHHHHTTTSCCCEEEEEEEGGGCCCCCSSEECTTSCCCCCSHHHHHHH
T ss_pred CCEEEEeCCCC-----CCCHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEcccEEEcCCCCCCCCCCCCCCCCChhhHHHH
Confidence 99999999863 3456688899999999999999998899999999999999988888999999999999999999
Q ss_pred HHHHHHHHHHhhCCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHHHhCCCCceeEecccCCCCCCceeeeee
Q 019795 162 WCEEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAVRDYI 241 (335)
Q Consensus 162 ~~E~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~v 241 (335)
++|++ +.+ ++++++||+++||+... .++..... .. .++ ++...++|+
T Consensus 139 ~~E~~-~~~------~~~~ilR~~~v~G~~~~---------------~~~~~~~~--~~---~~~------~~~~~~~~i 185 (286)
T 3gpi_A 139 EAEAL-LAA------YSSTILRFSGIYGPGRL---------------RMIRQAQT--PE---QWP------ARNAWTNRI 185 (286)
T ss_dssp HHHHH-GGG------SSEEEEEECEEEBTTBC---------------HHHHHTTC--GG---GSC------SSBCEECEE
T ss_pred HHHHH-Hhc------CCeEEEecccccCCCch---------------hHHHHHHh--cc---cCC------CcCceeEEE
Confidence 99998 543 78999999999998421 22333222 21 123 678889999
Q ss_pred eHhhhhc-------------cCceEEecCCccccHHHHHHHHHHHhCCCCCceeCCCCCCccceeeccHHHHHHhcCCcc
Q 019795 242 HVMDLAD-------------GCIAYNLGNGKGISVLEMVAAFEKASGKKIPIKFCPRRVGDATAVYAATDKAHKELGWKP 308 (335)
Q Consensus 242 ~~~D~~~-------------~~~~~nv~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~d~~k~~~~Lg~~p 308 (335)
|++|+++ .+++||+++++.+|+.|+++.+.+.+|.+.++...+ .......+|++|++ .|||+|
T Consensus 186 ~v~Dva~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~---~~~~~~~~d~~k~~-~lG~~p 261 (286)
T 3gpi_A 186 HRDDGAAFIAYLIQQRSHAVPERLYIVTDNQPLPVHDLLRWLADRQGIAYPAGATP---PVQGNKKLSNARLL-ASGYQL 261 (286)
T ss_dssp EHHHHHHHHHHHHHHHTTSCCCSEEEECCSCCEEHHHHHHHHHHHTTCCCCCSCCC---CBCSSCEECCHHHH-HTTCCC
T ss_pred EHHHHHHHHHHHHhhhccCCCCceEEEeCCCCCCHHHHHHHHHHHcCCCCCCCCCc---ccCCCeEeeHHHHH-HcCCCC
Confidence 9999987 368999999999999999999999999887665443 44567789999997 999999
Q ss_pred cc-CHHHHHHHHHHHHhcCCC
Q 019795 309 KY-GIEDMCAHQWNWAKNNPM 328 (335)
Q Consensus 309 ~~-~~~~~~~~~~~~~~~~~~ 328 (335)
++ +++++|+++++|+.....
T Consensus 262 ~~~~l~e~l~~~~~~~~~~~~ 282 (286)
T 3gpi_A 262 IYPDYVSGYGALLAAMREGHH 282 (286)
T ss_dssp SSCSHHHHHHHHHHHHTC---
T ss_pred cCCcHHHHHHHHHHHHhcccc
Confidence 99 699999999999987543
|
| >2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-42 Score=315.37 Aligned_cols=292 Identities=23% Similarity=0.308 Sum_probs=231.0
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCC-CeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGG-FKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
++|+|||||||||||++|+++|+++| ++|++++|+..... ...+ ..+. +.+|++|.+.+.++++.
T Consensus 45 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~--~~~~---------~~~~-~~~d~~~~~~~~~~~~~~~ 112 (357)
T 2x6t_A 45 EGRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK--FVNL---------VDLN-IADYMDKEDFLIQIMAGEE 112 (357)
T ss_dssp ---CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGG--GGGT---------TTSC-CSEEEEHHHHHHHHHTTCC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcch--hhcc---------cCce-EeeecCcHHHHHHHHhhcc
Confidence 35789999999999999999999999 99999998654321 1111 1233 67899999999998873
Q ss_pred -CCCCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccCCCCCCCccCCCCCCCCChhHH
Q 019795 80 -QKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGR 158 (335)
Q Consensus 80 -~~~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~Y~~ 158 (335)
.++|+|||+|+.... +..+++..+++|+.++.+++++|++.++ +||++||.++||.....+++|+.+..|.+.|+.
T Consensus 113 ~~~~d~Vih~A~~~~~--~~~~~~~~~~~n~~~~~~ll~a~~~~~~-r~V~~SS~~v~g~~~~~~~~E~~~~~p~~~Y~~ 189 (357)
T 2x6t_A 113 FGDVEAIFHEGACSST--TEWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSAATYGGRTSDFIESREYEKPLNVFGY 189 (357)
T ss_dssp CSSCCEEEECCSCCCT--TCCCHHHHHHHTHHHHHHHHHHHHHHTC-CEEEEEEGGGGCSCSSCCCSSGGGCCCSSHHHH
T ss_pred cCCCCEEEECCcccCC--ccCCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcchHHhCCCCCCCcCCcCCCCCCChhHH
Confidence 159999999997543 4567788999999999999999999888 999999999999877678999999999999999
Q ss_pred hHHHHHHHHHHHHhhCCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHHH-HHHHhCCCCceeEecccCCCCCCce-
Q 019795 159 TKQWCEEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYI-QQVAVGRHPELNVYGQDYPTKDGSA- 236 (335)
Q Consensus 159 sK~~~E~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~- 236 (335)
+|..+|++++.+..+. +++++++||++|||+.... ......+++.+ ..+..+. + +.++| ++.+
T Consensus 190 sK~~~E~~~~~~~~~~-g~~~~ilRp~~v~Gp~~~~------~~~~~~~~~~~~~~~~~~~-~-~~~~~------~~~~~ 254 (357)
T 2x6t_A 190 SKFLFDEYVRQILPEA-NSQIVGFRYFNVYGPREGH------KGSMASVAFHLNTQLNNGE-S-PKLFE------GSENF 254 (357)
T ss_dssp HHHHHHHHHHHHGGGC-SSCEEEEEECEEESSSCTT------CGGGSCHHHHHHHHHHTTC-C-CEEET------TGGGC
T ss_pred HHHHHHHHHHHHHHHc-CCCEEEEecCeEECCCCCC------CcccchHHHHHHHHHHcCC-C-cEEeC------CCCcc
Confidence 9999999999998877 8999999999999985321 00012344544 4444444 3 56677 6778
Q ss_pred eeeeeeHhhhhc---------cCceEEecCCccccHHHHHHHHHHHhCCCCCceeCCCCC----CccceeeccHHHHHHh
Q 019795 237 VRDYIHVMDLAD---------GCIAYNLGNGKGISVLEMVAAFEKASGKKIPIKFCPRRV----GDATAVYAATDKAHKE 303 (335)
Q Consensus 237 ~~~~v~~~D~~~---------~~~~~nv~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~----~~~~~~~~d~~k~~~~ 303 (335)
.++|+|++|+|+ .+++||+++++.+|+.|+++.+.+.+|.+ .+...+.+. .......+|++|+++
T Consensus 255 ~~~~i~v~Dva~ai~~~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~k~~~- 332 (357)
T 2x6t_A 255 KRDFVYVGDVADVNLWFLENGVSGIFNLGTGRAESFQAVADATLAYHKKG-QIEYIPFPDKLKGRYQAFTQADLTNLRA- 332 (357)
T ss_dssp EECEEEHHHHHHHHHHHHHHCCCEEEEESCSCCEEHHHHHHHHHHHHTCC-CCEEECCCGGGTTSCCSBCCCCCHHHHH-
T ss_pred eEccEEHHHHHHHHHHHHhcCCCCeEEecCCCcccHHHHHHHHHHHcCCC-CceecCCCcccccccccccccCHHHHHH-
Confidence 899999999997 37899999999999999999999999987 333322211 123456789999975
Q ss_pred cCC-ccccCHHHHHHHHHHHHhcC
Q 019795 304 LGW-KPKYGIEDMCAHQWNWAKNN 326 (335)
Q Consensus 304 Lg~-~p~~~~~~~~~~~~~~~~~~ 326 (335)
||| .|.++++++|+++++|++++
T Consensus 333 lG~~~~~~~l~e~l~~~~~~~~~~ 356 (357)
T 2x6t_A 333 AGYDKPFKTVAEGVTEYMAWLNRD 356 (357)
T ss_dssp TTCCCCCCCHHHHHHHHHHHHC--
T ss_pred cCCCCCCCCHHHHHHHHHHHHhhc
Confidence 999 78889999999999999763
|
| >1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-42 Score=304.86 Aligned_cols=267 Identities=18% Similarity=0.163 Sum_probs=223.2
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCCC
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKFE 83 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~d 83 (335)
.|+|||||||||||++|+++|+++|++|++++|+ .+|++|.+++.++++..++|
T Consensus 12 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~--------------------------~~Dl~d~~~~~~~~~~~~~d 65 (292)
T 1vl0_A 12 HMKILITGANGQLGREIQKQLKGKNVEVIPTDVQ--------------------------DLDITNVLAVNKFFNEKKPN 65 (292)
T ss_dssp CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTT--------------------------TCCTTCHHHHHHHHHHHCCS
T ss_pred cceEEEECCCChHHHHHHHHHHhCCCeEEeccCc--------------------------cCCCCCHHHHHHHHHhcCCC
Confidence 4789999999999999999999999999999883 25899999999998755699
Q ss_pred EEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccCCCCCCCccCCCCCCCCChhHHhHHHH
Q 019795 84 AVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQWC 163 (335)
Q Consensus 84 ~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~Y~~sK~~~ 163 (335)
+|||+|+......+..+++..+++|+.++.+++++|++.++ ++|++||.++|+.....+++|+++..|.+.|+.+|..+
T Consensus 66 ~vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~-~iv~~SS~~v~~~~~~~~~~E~~~~~~~~~Y~~sK~~~ 144 (292)
T 1vl0_A 66 VVINCAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVGA-EIVQISTDYVFDGEAKEPITEFDEVNPQSAYGKTKLEG 144 (292)
T ss_dssp EEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGSCSCCSSCBCTTSCCCCCSHHHHHHHHH
T ss_pred EEEECCccCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEechHHeECCCCCCCCCCCCCCCCccHHHHHHHHH
Confidence 99999998665555678889999999999999999999887 99999999999987767899999999999999999999
Q ss_pred HHHHHHHHhhCCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHHHhCCCCceeEecccCCCCCCceeeeeeeH
Q 019795 164 EEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAVRDYIHV 243 (335)
Q Consensus 164 E~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~v~~ 243 (335)
|++++.+ ..+++++||++|||+ .. .+.+.+......+.+ +.+.| ++.++|+|+
T Consensus 145 E~~~~~~-----~~~~~~lR~~~v~G~-~~------------~~~~~~~~~~~~~~~-~~~~~--------~~~~~~i~v 197 (292)
T 1vl0_A 145 ENFVKAL-----NPKYYIVRTAWLYGD-GN------------NFVKTMINLGKTHDE-LKVVH--------DQVGTPTST 197 (292)
T ss_dssp HHHHHHH-----CSSEEEEEECSEESS-SS------------CHHHHHHHHHHHCSE-EEEES--------SCEECCEEH
T ss_pred HHHHHhh-----CCCeEEEeeeeeeCC-Cc------------ChHHHHHHHHhcCCc-EEeec--------CeeeCCccH
Confidence 9999876 346899999999998 21 244444333333333 45544 367899999
Q ss_pred hhhhc---------cCceEEecCCccccHHHHHHHHHHHhCCCCCceeCCC-----CCCccceeeccHHHHHHhcCCccc
Q 019795 244 MDLAD---------GCIAYNLGNGKGISVLEMVAAFEKASGKKIPIKFCPR-----RVGDATAVYAATDKAHKELGWKPK 309 (335)
Q Consensus 244 ~D~~~---------~~~~~nv~~~~~~s~~el~~~i~~~~g~~~~~~~~~~-----~~~~~~~~~~d~~k~~~~Lg~~p~ 309 (335)
+|+++ .+++||+++++.+|+.|+++.+.+.+|.+.++...+. .........+|++|+++.|||+|+
T Consensus 198 ~Dva~~~~~~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~ 277 (292)
T 1vl0_A 198 VDLARVVLKVIDEKNYGTFHCTCKGICSWYDFAVEIFRLTGIDVKVTPCTTEEFPRPAKRPKYSVLRNYMLELTTGDITR 277 (292)
T ss_dssp HHHHHHHHHHHHHTCCEEEECCCBSCEEHHHHHHHHHHHHCCCCEEEEECSTTSCCSSCCCSBCCBCCHHHHHTTCCCCC
T ss_pred HHHHHHHHHHHhcCCCcEEEecCCCCccHHHHHHHHHHHhCCCCceeeccccccCcccCCCccccccHHHHHHHcCCCCC
Confidence 99997 4789999999999999999999999998765544332 122345678999999999999999
Q ss_pred cCHHHHHHHHHHHHhc
Q 019795 310 YGIEDMCAHQWNWAKN 325 (335)
Q Consensus 310 ~~~~~~~~~~~~~~~~ 325 (335)
+++++|+++++|+++
T Consensus 278 -~~~~~l~~~~~~~~~ 292 (292)
T 1vl0_A 278 -EWKESLKEYIDLLQM 292 (292)
T ss_dssp -BHHHHHHHHHHHHTC
T ss_pred -CHHHHHHHHHHHhcC
Confidence 999999999999964
|
| >3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.8e-42 Score=306.47 Aligned_cols=295 Identities=16% Similarity=0.185 Sum_probs=234.6
Q ss_pred eEEEEcCCChhhHHHHHHHHhC--CCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCCC
Q 019795 6 NILVTGGAGFIGTHCALQLLQG--GFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKFE 83 (335)
Q Consensus 6 ~vlItGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~d 83 (335)
+|||||||||||++|+++|+++ |++|++++|+.... .++.++.+|++|.+++.++++..++|
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~----------------~~~~~~~~D~~d~~~~~~~~~~~~~d 64 (317)
T 3ajr_A 1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDT----------------GGIKFITLDVSNRDEIDRAVEKYSID 64 (317)
T ss_dssp CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCC----------------TTCCEEECCTTCHHHHHHHHHHTTCC
T ss_pred CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCccc----------------cCceEEEecCCCHHHHHHHHhhcCCc
Confidence 5899999999999999999998 89999999865432 13568999999999999999866799
Q ss_pred EEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccCCC-CCCCccCCCCCCCCChhHHhHHH
Q 019795 84 AVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQP-EKIPCVEDFPYGAMNPYGRTKQW 162 (335)
Q Consensus 84 ~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~-~~~~~~e~~~~~~~~~Y~~sK~~ 162 (335)
+|||+|+.... ....+++..+++|+.++.+++++|++.+++++|++||.++|+.. ...+.+|+.+..|.+.|+.+|..
T Consensus 65 ~vih~a~~~~~-~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~ 143 (317)
T 3ajr_A 65 AIFHLAGILSA-KGEKDPALAYKVNMNGTYNILEAAKQHRVEKVVIPSTIGVFGPETPKNKVPSITITRPRTMFGVTKIA 143 (317)
T ss_dssp EEEECCCCCHH-HHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCCTTSCSSSBCSSSCCCCCSHHHHHHHH
T ss_pred EEEECCcccCC-ccccChHHHhhhhhHHHHHHHHHHHHcCCCEEEEecCHHHhCCCCCCCCccccccCCCCchHHHHHHH
Confidence 99999998543 23457788999999999999999999999999999999999875 34567888888899999999999
Q ss_pred HHHHHHHHHhhCCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHHHhCCCCceeEecccCCCCCCceeeeeee
Q 019795 163 CEEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAVRDYIH 242 (335)
Q Consensus 163 ~E~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~v~ 242 (335)
+|.+++.+.+++ +++++++||+++||+...+. ......+.+.+...+.++. +.+++ ++...++|+|
T Consensus 144 ~e~~~~~~~~~~-~~~~~~lR~~~~~g~~~~~~-----~~~~~~~~~~~~~~~~~~~--~~~~~------~~~~~~~~i~ 209 (317)
T 3ajr_A 144 AELLGQYYYEKF-GLDVRSLRYPGIISYKAEPT-----AGTTDYAVEIFYYAVKREK--YKCYL------APNRALPMMY 209 (317)
T ss_dssp HHHHHHHHHHHH-CCEEEEEEECEEECSSSCCC-----SCSSTHHHHHHHHHHTTCC--EEECS------CTTCCEEEEE
T ss_pred HHHHHHHHHHhc-CCeEEEEecCcEeccCCCCC-----CcchhHHHHHHHHHHhCCC--ceeec------CccceeeeeE
Confidence 999999888776 99999999999999753210 0011224455555555443 45555 5778899999
Q ss_pred Hhhhhc---------c-----CceEEecCCccccHHHHHHHHHHHhCCCCCceeCCCCCC---ccceeeccHHHHHHhcC
Q 019795 243 VMDLAD---------G-----CIAYNLGNGKGISVLEMVAAFEKASGKKIPIKFCPRRVG---DATAVYAATDKAHKELG 305 (335)
Q Consensus 243 ~~D~~~---------~-----~~~~nv~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~---~~~~~~~d~~k~~~~Lg 305 (335)
++|+++ . +++||+++ +.+|+.|+++.+.+.+|. ..+.+.+.... ......+|++|+++.||
T Consensus 210 v~Dva~a~~~~l~~~~~~~~~g~~~~i~~-~~~s~~e~~~~i~~~~~~-~~i~~~~~~~~~~~~~~~~~~d~~k~~~~lG 287 (317)
T 3ajr_A 210 MPDALKALVDLYEADRDKLVLRNGYNVTA-YTFTPSELYSKIKERIPE-FEIEYKEDFRDKIAATWPESLDSSEASNEWG 287 (317)
T ss_dssp HHHHHHHHHHHHHCCGGGCSSCSCEECCS-EEECHHHHHHHHHTTCCS-CCEEECCCHHHHHHTTSCSCBCCHHHHHHHC
T ss_pred HHHHHHHHHHHHhCCccccccCceEecCC-ccccHHHHHHHHHHHCCc-cccccccccchhhccccccccCHHHHHHHcC
Confidence 999987 1 37999985 689999999999999883 33333332000 11234689999999999
Q ss_pred CccccCHHHHHHHHHHHHhcCCCCcccC
Q 019795 306 WKPKYGIEDMCAHQWNWAKNNPMGYQTK 333 (335)
Q Consensus 306 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (335)
|+|+++++++|+++++|++++....|+.
T Consensus 288 ~~p~~~~~~~l~~~~~~~~~~~~~~g~~ 315 (317)
T 3ajr_A 288 FSIEYDLDRTIDDMIDHISEKLGIEGKH 315 (317)
T ss_dssp CCCCCCHHHHHHHHHHHHHHHTTSSCCC
T ss_pred CCCCCCHHHHHHHHHHHHHhhhcccccc
Confidence 9999999999999999999877665553
|
| >1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-42 Score=307.52 Aligned_cols=272 Identities=17% Similarity=0.117 Sum_probs=224.4
Q ss_pred CeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCCCE
Q 019795 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKFEA 84 (335)
Q Consensus 5 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~d~ 84 (335)
|+|||||||||||++|+++|+ +|++|++++|+.. ++.+|++|.+++.++++..++|+
T Consensus 1 m~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~----------------------~~~~D~~d~~~~~~~~~~~~~d~ 57 (299)
T 1n2s_A 1 MNILLFGKTGQVGWELQRSLA-PVGNLIALDVHSK----------------------EFCGDFSNPKGVAETVRKLRPDV 57 (299)
T ss_dssp CEEEEECTTSHHHHHHHHHTT-TTSEEEEECTTCS----------------------SSCCCTTCHHHHHHHHHHHCCSE
T ss_pred CeEEEECCCCHHHHHHHHHhh-cCCeEEEeccccc----------------------cccccCCCHHHHHHHHHhcCCCE
Confidence 489999999999999999999 8999999998531 25689999999999998445999
Q ss_pred EEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccCCCCCCCccCCCCCCCCChhHHhHHHHH
Q 019795 85 VIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQWCE 164 (335)
Q Consensus 85 vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~Y~~sK~~~E 164 (335)
|||+|+......+..+++..+++|+.++.+++++|++.++ ++||+||.++||.....+++|+++..|.+.|+.+|..+|
T Consensus 58 vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~vy~~~~~~~~~E~~~~~p~~~Y~~sK~~~E 136 (299)
T 1n2s_A 58 IVNAAAHTAVDKAESEPELAQLLNATSVEAIAKAANETGA-WVVHYSTDYVFPGTGDIPWQETDATSPLNVYGKTKLAGE 136 (299)
T ss_dssp EEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTTTC-EEEEEEEGGGSCCCTTCCBCTTSCCCCSSHHHHHHHHHH
T ss_pred EEECcccCCHhhhhcCHHHHHHHHHHHHHHHHHHHHHcCC-cEEEEecccEEeCCCCCCCCCCCCCCCccHHHHHHHHHH
Confidence 9999998765555678889999999999999999998887 899999999999877778999999999999999999999
Q ss_pred HHHHHHHhhCCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHHHhCCCCceeEecccCCCCCCceeeeeeeHh
Q 019795 165 EIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAVRDYIHVM 244 (335)
Q Consensus 165 ~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~v~~~ 244 (335)
++++.+ ..+++++||+++||+... .+.+.+......+.+ +.+.| ++.++|+|++
T Consensus 137 ~~~~~~-----~~~~~ilRp~~v~G~~~~------------~~~~~~~~~~~~~~~-~~~~~--------~~~~~~i~v~ 190 (299)
T 1n2s_A 137 KALQDN-----CPKHLIFRTSWVYAGKGN------------NFAKTMLRLAKERQT-LSVIN--------DQYGAPTGAE 190 (299)
T ss_dssp HHHHHH-----CSSEEEEEECSEECSSSC------------CHHHHHHHHHHHCSE-EEEEC--------SCEECCEEHH
T ss_pred HHHHHh-----CCCeEEEeeeeecCCCcC------------cHHHHHHHHHhcCCC-EEeec--------CcccCCeeHH
Confidence 999876 337999999999998421 244544443333333 55555 3679999999
Q ss_pred hhhc--------c------CceEEecCCccccHHHHHHHHHHHhCCCC------CceeCCC-----CCCccceeeccHHH
Q 019795 245 DLAD--------G------CIAYNLGNGKGISVLEMVAAFEKASGKKI------PIKFCPR-----RVGDATAVYAATDK 299 (335)
Q Consensus 245 D~~~--------~------~~~~nv~~~~~~s~~el~~~i~~~~g~~~------~~~~~~~-----~~~~~~~~~~d~~k 299 (335)
|+++ . +++||+++++.+|+.|+++.+.+.+|.+. .+...+. .........+|++|
T Consensus 191 Dva~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k 270 (299)
T 1n2s_A 191 LLADCTAHAIRVALNKPEVAGLYHLVAGGTTTWHDYAALVFDEARKAGITLALTELNAVPTSAYPTPASRPGNSRLNTEK 270 (299)
T ss_dssp HHHHHHHHHHHHHHHCGGGCEEEECCCBSCEEHHHHHHHHHHHHHHHTCCCCCCEEEEECSTTSCCSSCCCSBCCBCCHH
T ss_pred HHHHHHHHHHHHhccccccCceEEEeCCCCCCHHHHHHHHHHHhCCCccccccccccccccccccCcCCCCCceeeeHHH
Confidence 9987 2 68999999999999999999999998652 2322221 12234567899999
Q ss_pred HHHhcCCccccCHHHHHHHHHHHHhcCC
Q 019795 300 AHKELGWKPKYGIEDMCAHQWNWAKNNP 327 (335)
Q Consensus 300 ~~~~Lg~~p~~~~~~~~~~~~~~~~~~~ 327 (335)
+++.|||+|+ +++++|+++++|++++.
T Consensus 271 ~~~~lG~~p~-~~~~~l~~~~~~~~~~~ 297 (299)
T 1n2s_A 271 FQRNFDLILP-QWELGVKRMLTEMFTTT 297 (299)
T ss_dssp HHHHHTCCCC-BHHHHHHHHHHHHHSCC
T ss_pred HHHhcCCCCC-CHHHHHHHHHHHHHhcC
Confidence 9999999999 89999999999999765
|
| >1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-42 Score=309.99 Aligned_cols=291 Identities=23% Similarity=0.287 Sum_probs=213.9
Q ss_pred eEEEEcCCChhhHHHHHHHHhCC-CeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc---CC
Q 019795 6 NILVTGGAGFIGTHCALQLLQGG-FKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS---QK 81 (335)
Q Consensus 6 ~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~---~~ 81 (335)
+|||||||||||++|+++|+++| ++|++++|...... ...+ .++. +.+|++|.+.+.++++. .+
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~--~~~~---------~~~~-~~~d~~~~~~~~~~~~~~~~~~ 68 (310)
T 1eq2_A 1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK--FVNL---------VDLN-IADYMDKEDFLIQIMAGEEFGD 68 (310)
T ss_dssp CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGG--GHHH---------HTSC-CSEEEEHHHHHHHHHTTCCCSS
T ss_pred CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCCCch--hhhc---------Ccce-eccccccHHHHHHHHhccccCC
Confidence 58999999999999999999999 99999998754321 1111 1233 67899999999998873 15
Q ss_pred CCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccCCCCCCCccCCCCCCCCChhHHhHH
Q 019795 82 FEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQ 161 (335)
Q Consensus 82 ~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~Y~~sK~ 161 (335)
+|+|||+|+.... +..+++..+++|+.++.+++++|++.++ ++|++||.++||.....+++|+.+..|.+.|+.+|.
T Consensus 69 ~d~vi~~a~~~~~--~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~v~g~~~~~~~~E~~~~~p~~~Y~~sK~ 145 (310)
T 1eq2_A 69 VEAIFHEGACSST--TEWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSAATYGGRTSDFIESREYEKPLNVYGYSKF 145 (310)
T ss_dssp CCEEEECCSCCCT--TCCCHHHHHHHTHHHHHHHHHHHHHHTC-CEEEEEEGGGGTTCCSCBCSSGGGCCCSSHHHHHHH
T ss_pred CcEEEECcccccC--cccCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEeeHHHhCCCCCCCCCCCCCCCCCChhHHHHH
Confidence 9999999997543 4567788999999999999999999998 999999999999877678999999999999999999
Q ss_pred HHHHHHHHHHhhCCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHHHhCCCCceeEecccCCCCCCce-eeee
Q 019795 162 WCEEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSA-VRDY 240 (335)
Q Consensus 162 ~~E~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~ 240 (335)
.+|.+++.+..+. +++++++||+++||+..... .....+++.+......+.+ +.++| ++.+ .++|
T Consensus 146 ~~e~~~~~~~~~~-g~~~~~lrp~~v~G~~~~~~------~~~~~~~~~~~~~~~~~~~-~~~~~------~g~~~~~~~ 211 (310)
T 1eq2_A 146 LFDEYVRQILPEA-NSQIVGFRYFNVYGPREGHK------GSMASVAFHLNTQLNNGES-PKLFE------GSENFKRDF 211 (310)
T ss_dssp HHHHHHHHHGGGC-SSCEEEEEECEEESSSCGGG------GGGSCHHHHHHHHHHC--------------------CBCE
T ss_pred HHHHHHHHHHHHc-CCCEEEEeCCcEECcCCCCC------CccchHHHHHHHHHHcCCC-cEEec------CCCcceEcc
Confidence 9999999988877 99999999999999853210 0012355544443333333 45566 6778 8999
Q ss_pred eeHhhhhc---------cCceEEecCCccccHHHHHHHHHHHhCCC-CCceeCCCC--CCccceeeccHHHHHHhcCC-c
Q 019795 241 IHVMDLAD---------GCIAYNLGNGKGISVLEMVAAFEKASGKK-IPIKFCPRR--VGDATAVYAATDKAHKELGW-K 307 (335)
Q Consensus 241 v~~~D~~~---------~~~~~nv~~~~~~s~~el~~~i~~~~g~~-~~~~~~~~~--~~~~~~~~~d~~k~~~~Lg~-~ 307 (335)
+|++|+++ .+++||+++++.+|+.|+++.+.+.+|.+ +.....+.. ........+|++|+++ ||| .
T Consensus 212 i~v~Dva~~~~~~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-lG~~~ 290 (310)
T 1eq2_A 212 VYVGDVADVNLWFLENGVSGIFNLGTGRAESFQAVADATLAYHKKGQIEYIPFPDKLKGRYQAFTQADLTNLRA-AGYDK 290 (310)
T ss_dssp EEHHHHHHHHHHHHHHCCCEEEEESCSCCBCHHHHHHHC---------------------CCCSCCBCCHHHHH-TTCCC
T ss_pred EEHHHHHHHHHHHHhcCCCCeEEEeCCCccCHHHHHHHHHHHcCCCCceeCCCChhhhcccccccccchHHHHh-cCCCC
Confidence 99999997 37899999999999999999999999976 222222221 1122356789999975 999 7
Q ss_pred cccCHHHHHHHHHHHHhcC
Q 019795 308 PKYGIEDMCAHQWNWAKNN 326 (335)
Q Consensus 308 p~~~~~~~~~~~~~~~~~~ 326 (335)
|.++++++|+++++|++++
T Consensus 291 ~~~~l~~~l~~~~~~~~~~ 309 (310)
T 1eq2_A 291 PFKTVAEGVTEYMAWLNRD 309 (310)
T ss_dssp CCCCHHHHHHHHHHHTC--
T ss_pred CCCCHHHHHHHHHHHHHhc
Confidence 8889999999999999764
|
| >1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=6.5e-42 Score=335.58 Aligned_cols=307 Identities=19% Similarity=0.312 Sum_probs=239.4
Q ss_pred CCCCCeEEEEcCCChhhHHHHHHHHhC-CCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHH-HHHHHh
Q 019795 1 MASEKNILVTGGAGFIGTHCALQLLQG-GFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDD-LDKLFS 78 (335)
Q Consensus 1 ~~~~~~vlItGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~-~~~~~~ 78 (335)
|+++|+|||||||||||++|+++|+++ |++|++++|+........ . ..++.++.+|++|.++ +.++++
T Consensus 312 ~~~~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~~~~~----~------~~~v~~v~~Dl~d~~~~~~~~~~ 381 (660)
T 1z7e_A 312 ARRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL----N------HPHFHFVEGDISIHSEWIEYHVK 381 (660)
T ss_dssp --CCEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEESCCTTTGGGT----T------CTTEEEEECCTTTCHHHHHHHHH
T ss_pred hccCceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcCchhhhhhc----c------CCceEEEECCCCCcHHHHHHhhc
Confidence 457889999999999999999999998 899999999765432211 0 1578899999998765 777887
Q ss_pred cCCCCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccCCCCCCCccCCCCC-------C
Q 019795 79 SQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQPEKIPCVEDFPY-------G 151 (335)
Q Consensus 79 ~~~~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~-------~ 151 (335)
++|+|||+|+.........++...+++|+.++.+++++|++.+ +++|++||.++||.....+++|+++. .
T Consensus 382 --~~D~Vih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~-~r~V~~SS~~vyg~~~~~~~~E~~~~~~~~p~~~ 458 (660)
T 1z7e_A 382 --KCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR-KRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNK 458 (660)
T ss_dssp --HCSEEEECCCCCCTHHHHHSHHHHHHHHTHHHHHHHHHHHHTT-CEEEEECCGGGGBTCCSSSBCTTTCCEEECCTTC
T ss_pred --CCCEEEECceecCccccccCHHHHHHhhhHHHHHHHHHHHHhC-CEEEEEecHHHcCCCCCcccCCCccccccCcccC
Confidence 7899999999865544556788899999999999999999988 89999999999998776778888753 4
Q ss_pred CCChhHHhHHHHHHHHHHHHhhCCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHH-HHHHHHhCCCCceeEecccCC
Q 019795 152 AMNPYGRTKQWCEEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMP-YIQQVAVGRHPELNVYGQDYP 230 (335)
Q Consensus 152 ~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~ 230 (335)
|.+.|+.+|.++|.+++.++++. +++++++||++|||+........ ..+ ...+++ ++..+..+. + +.++|
T Consensus 459 p~~~Y~~sK~~~E~~~~~~~~~~-gi~~~ilRpg~v~Gp~~~~~~~~-~~~-~~~~~~~~~~~~~~g~-~-~~~~g---- 529 (660)
T 1z7e_A 459 PRWIYSVSKQLLDRVIWAYGEKE-GLQFTLFRPFNWMGPRLDNLNAA-RIG-SSRAITQLILNLVEGS-P-IKLID---- 529 (660)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHH-CCCEEEEEECSEESTTSSCHHHH-TTT-CSCHHHHHHHHHHHTC-C-EEEEG----
T ss_pred CCCCcHHHHHHHHHHHHHHHHHc-CCCEEEECCCcccCCCccccccc-ccc-ccchHHHHHHHHHcCC-C-cEEeC----
Confidence 55689999999999999888777 99999999999999954210000 000 122344 444555554 4 56677
Q ss_pred CCCCceeeeeeeHhhhhc-------------cCceEEecCCc-cccHHHHHHHHHHHhCCCCCceeCCCC----------
Q 019795 231 TKDGSAVRDYIHVMDLAD-------------GCIAYNLGNGK-GISVLEMVAAFEKASGKKIPIKFCPRR---------- 286 (335)
Q Consensus 231 ~~~~~~~~~~v~~~D~~~-------------~~~~~nv~~~~-~~s~~el~~~i~~~~g~~~~~~~~~~~---------- 286 (335)
++.+.++|+|++|+++ .+++||+++++ .+|+.|+++.+.+.+|.+......+..
T Consensus 530 --~g~~~~~~i~v~Dva~ai~~~l~~~~~~~~g~~~ni~~~~~~~s~~el~~~i~~~~g~~~~~~~~p~~~~~~~~~~~~ 607 (660)
T 1z7e_A 530 --GGKQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVESSS 607 (660)
T ss_dssp --GGCCEEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECCGGGEEEHHHHHHHHHHHHHHCTTGGGSCCCCCEEEECTHH
T ss_pred --CCCeEEEEEEHHHHHHHHHHHHhCccccCCCeEEEECCCCCCcCHHHHHHHHHHHhcCCCcccccCccccccchhccc
Confidence 6788999999999987 25799999886 899999999999999865432222211
Q ss_pred -----CCccceeeccHHHHHHhcCCccccCHHHHHHHHHHHHhcCCCCcc
Q 019795 287 -----VGDATAVYAATDKAHKELGWKPKYGIEDMCAHQWNWAKNNPMGYQ 331 (335)
Q Consensus 287 -----~~~~~~~~~d~~k~~~~Lg~~p~~~~~~~~~~~~~~~~~~~~~~~ 331 (335)
..+.....+|++|+++.|||+|+++++++|+++++|++++...-+
T Consensus 608 ~~~~~~~~~~~~~~d~~ka~~~LG~~p~~~l~egl~~~i~~~~~~~~~~~ 657 (660)
T 1z7e_A 608 YYGKGYQDVEHRKPSIRNAHRCLDWEPKIDMQETIDETLDFFLRTVDLTD 657 (660)
T ss_dssp HHCTTCCCCSCCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHTTSCCC-
T ss_pred cccccccchhhcccCHHHHHHhcCCCccCcHHHHHHHHHHHHHhhccccc
Confidence 112345678999999999999999999999999999999876433
|
| >2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-42 Score=310.58 Aligned_cols=283 Identities=23% Similarity=0.353 Sum_probs=225.5
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCC
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQK 81 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~ 81 (335)
+++|+|||||||||||++|+++|+++|++|++++|+..........+ .++.++.+|++|.+++.++++..+
T Consensus 18 ~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~l---------~~v~~~~~Dl~d~~~~~~~~~~~~ 88 (330)
T 2pzm_A 18 GSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPV---------AGLSVIEGSVTDAGLLERAFDSFK 88 (330)
T ss_dssp TTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSCSC---------TTEEEEECCTTCHHHHHHHHHHHC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhhcc---------CCceEEEeeCCCHHHHHHHHhhcC
Confidence 56789999999999999999999999999999999655432111111 468899999999999999987557
Q ss_pred CCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccCCCCCC--CccCCCCCCCCChhHHh
Q 019795 82 FEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQPEKI--PCVEDFPYGAMNPYGRT 159 (335)
Q Consensus 82 ~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~--~~~e~~~~~~~~~Y~~s 159 (335)
+|+|||+|+..... +.++++ +++|+.++.+++++|.+.++++||++||.++||..... +++|+. .|.+.|+.+
T Consensus 89 ~D~vih~A~~~~~~-~~~~~~--~~~N~~~~~~l~~a~~~~~~~~iV~~SS~~~~~~~~~~~~~~~E~~--~~~~~Y~~s 163 (330)
T 2pzm_A 89 PTHVVHSAAAYKDP-DDWAED--AATNVQGSINVAKAASKAGVKRLLNFQTALCYGRPATVPIPIDSPT--APFTSYGIS 163 (330)
T ss_dssp CSEEEECCCCCSCT-TCHHHH--HHHHTHHHHHHHHHHHHHTCSEEEEEEEGGGGCSCSSSSBCTTCCC--CCCSHHHHH
T ss_pred CCEEEECCccCCCc-cccChh--HHHHHHHHHHHHHHHHHcCCCEEEEecCHHHhCCCccCCCCcCCCC--CCCChHHHH
Confidence 89999999975432 233343 89999999999999999888999999999999876443 777877 677899999
Q ss_pred HHHHHHHHHHHHhhCCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHH-HHHHHhCCCCceeEecccCCCCCCceee
Q 019795 160 KQWCEEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPY-IQQVAVGRHPELNVYGQDYPTKDGSAVR 238 (335)
Q Consensus 160 K~~~E~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 238 (335)
|..+|.+++.+ +++.+++||+++|||.. ...+.+. +.....+. . +++ ++. .+
T Consensus 164 K~~~e~~~~~~-----~~~~~~iR~~~v~gp~~-----------~~~~~~~~~~~~~~~~-~---~~~------~~~-~~ 216 (330)
T 2pzm_A 164 KTAGEAFLMMS-----DVPVVSLRLANVTGPRL-----------AIGPIPTFYKRLKAGQ-K---CFC------SDT-VR 216 (330)
T ss_dssp HHHHHHHHHTC-----SSCEEEEEECEEECTTC-----------CSSHHHHHHHHHHTTC-C---CCE------ESC-EE
T ss_pred HHHHHHHHHHc-----CCCEEEEeeeeeECcCC-----------CCCHHHHHHHHHHcCC-E---EeC------CCC-Ee
Confidence 99999998754 78899999999999852 1224443 34444443 2 233 455 88
Q ss_pred eeeeHhhhhc-c---------CceEEecCCccccHHHHHHHHHHHhCCCCCceeCCCCCCccceeeccHHHH-----HHh
Q 019795 239 DYIHVMDLAD-G---------CIAYNLGNGKGISVLEMVAAFEKASGKKIPIKFCPRRVGDATAVYAATDKA-----HKE 303 (335)
Q Consensus 239 ~~v~~~D~~~-~---------~~~~nv~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~d~~k~-----~~~ 303 (335)
+|+|++|+++ . +++||+++++.+|+.|+++.+.+.+|.+ ++.+.+.++ +.....+|++|+ ++
T Consensus 217 ~~i~~~Dva~~a~~~~~~~~~g~~~~v~~~~~~s~~e~~~~i~~~~g~~-~~~~~~~~~-~~~~~~~d~~k~~~~~l~~- 293 (330)
T 2pzm_A 217 DFLDMSDFLAIADLSLQEGRPTGVFNVSTGEGHSIKEVFDVVLDYVGAT-LAEPVPVVA-PGADDVPSVVLDPSKTETE- 293 (330)
T ss_dssp CEEEHHHHHHHHHHHTSTTCCCEEEEESCSCCEEHHHHHHHHHHHHTCC-CSSCCCEEC-CCTTSCSEECBCCHHHHHH-
T ss_pred cceeHHHHHHHHHHHHhhcCCCCEEEeCCCCCCCHHHHHHHHHHHhCCC-CceeCCCCc-chhhccCCHHHHhhchHHH-
Confidence 9999999987 1 6799999999999999999999999987 544444333 445667788888 77
Q ss_pred cCCccccCHHHHHHHHHHHHhcCCC
Q 019795 304 LGWKPKYGIEDMCAHQWNWAKNNPM 328 (335)
Q Consensus 304 Lg~~p~~~~~~~~~~~~~~~~~~~~ 328 (335)
|||+|+++++++|+++++|+++++.
T Consensus 294 lG~~p~~~~~~~l~~~~~~~~~~~~ 318 (330)
T 2pzm_A 294 FGWKAKVDFKDTITGQLAWYDKYGV 318 (330)
T ss_dssp HCCCCCCCHHHHHHHHHHHHHHHCS
T ss_pred cCCcccCCHHHHHHHHHHHHHhhCc
Confidence 9999999999999999999998766
|
| >2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-41 Score=307.41 Aligned_cols=282 Identities=24% Similarity=0.263 Sum_probs=221.4
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCC
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQK 81 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~ 81 (335)
++||+|||||||||||++|+++|+++|++|++++|+....... +... .++.++.+|++|.+++.++++..+
T Consensus 19 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---l~~~------~~~~~~~~Dl~d~~~~~~~~~~~~ 89 (333)
T 2q1w_A 19 SHMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREH---LKDH------PNLTFVEGSIADHALVNQLIGDLQ 89 (333)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGG---SCCC------TTEEEEECCTTCHHHHHHHHHHHC
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchhh---Hhhc------CCceEEEEeCCCHHHHHHHHhccC
Confidence 3578999999999999999999999999999999975433211 1110 368899999999999999998444
Q ss_pred CCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccC----CCCCCCccCCCCCCCC-Chh
Q 019795 82 FEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYG----QPEKIPCVEDFPYGAM-NPY 156 (335)
Q Consensus 82 ~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg----~~~~~~~~e~~~~~~~-~~Y 156 (335)
+|+|||+|+..... +..+++ +++|+.++.+++++|++.++++||++||.++|| .... +++|+. .|. +.|
T Consensus 90 ~D~vih~A~~~~~~-~~~~~~--~~~N~~~~~~l~~a~~~~~~~~iV~~SS~~~~g~~~~~~~~-~~~E~~--~p~~~~Y 163 (333)
T 2q1w_A 90 PDAVVHTAASYKDP-DDWYND--TLTNCVGGSNVVQAAKKNNVGRFVYFQTALCYGVKPIQQPV-RLDHPR--NPANSSY 163 (333)
T ss_dssp CSEEEECCCCCSCT-TCHHHH--HHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGCSCCCSSSB-CTTSCC--CCTTCHH
T ss_pred CcEEEECceecCCC-ccCChH--HHHHHHHHHHHHHHHHHhCCCEEEEECcHHHhCCCcccCCC-CcCCCC--CCCCCch
Confidence 99999999975432 223333 899999999999999999889999999999998 5444 777877 666 899
Q ss_pred HHhHHHHHHHHHH-HHhhCCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHH-HHHHHhCCCCceeEecccCCCCCC
Q 019795 157 GRTKQWCEEIAFD-VQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPY-IQQVAVGRHPELNVYGQDYPTKDG 234 (335)
Q Consensus 157 ~~sK~~~E~~~~~-~~~~~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~ 234 (335)
+.+|.++|.+++. +. +++++||+++||+.. ...+++. +.....+. . +. + +
T Consensus 164 ~~sK~~~E~~~~~s~~------~~~ilR~~~v~gp~~-----------~~~~~~~~~~~~~~~~-~-~~--~-------~ 215 (333)
T 2q1w_A 164 AISKSANEDYLEYSGL------DFVTFRLANVVGPRN-----------VSGPLPIFFQRLSEGK-K-CF--V-------T 215 (333)
T ss_dssp HHHHHHHHHHHHHHTC------CEEEEEESEEESTTC-----------CSSHHHHHHHHHHTTC-C-CE--E-------E
T ss_pred HHHHHHHHHHHHhhhC------CeEEEeeceEECcCC-----------cCcHHHHHHHHHHcCC-e-ee--C-------C
Confidence 9999999999886 42 789999999999841 1234453 44444444 3 22 1 3
Q ss_pred ceeeeeeeHhhhhc---------cCceEEecCCccccHHHHHHHHHHHhCCCCCceeCCCCC----CccceeeccHHHHH
Q 019795 235 SAVRDYIHVMDLAD---------GCIAYNLGNGKGISVLEMVAAFEKASGKKIPIKFCPRRV----GDATAVYAATDKAH 301 (335)
Q Consensus 235 ~~~~~~v~~~D~~~---------~~~~~nv~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~----~~~~~~~~d~~k~~ 301 (335)
.+.++|+|++|+++ .+++||+++++.+|+.|+++.+.+.+|.+ ++.+.+... .-.....+|++|++
T Consensus 216 ~~~~~~i~v~Dva~ai~~~~~~~~g~~~~v~~~~~~s~~e~~~~i~~~~g~~-~~~~~~~~~~~~~~~~~~~~~d~~k~~ 294 (333)
T 2q1w_A 216 KARRDFVFVKDLARATVRAVDGVGHGAYHFSSGTDVAIKELYDAVVEAMALP-SYPEPEIRELGPDDAPSILLDPSRTIQ 294 (333)
T ss_dssp ECEECEEEHHHHHHHHHHHHTTCCCEEEECSCSCCEEHHHHHHHHHHHTTCS-SCCCCEEEECCTTSCCCCCBCCHHHHH
T ss_pred CceEeeEEHHHHHHHHHHHHhcCCCCEEEeCCCCCccHHHHHHHHHHHhCCC-CceeCCCCCcccccccccccCCHHHHH
Confidence 46789999999987 26899999999999999999999999987 443333211 11156789999998
Q ss_pred HhcCCccccCHHHHHHHHHHHHhcCCC
Q 019795 302 KELGWKPKYGIEDMCAHQWNWAKNNPM 328 (335)
Q Consensus 302 ~~Lg~~p~~~~~~~~~~~~~~~~~~~~ 328 (335)
+. ||+|+++++++|+++++|+++++.
T Consensus 295 ~~-G~~p~~~~~~~l~~~~~~~~~~~~ 320 (333)
T 2q1w_A 295 DF-GKIEFTPLKETVAAAVAYFREYGV 320 (333)
T ss_dssp HH-CCCCCCCHHHHHHHHHHHHHHHCC
T ss_pred hc-CCCcCCCHHHHHHHHHHHHHHHCC
Confidence 88 999999999999999999998765
|
| >2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-42 Score=306.59 Aligned_cols=280 Identities=16% Similarity=0.124 Sum_probs=196.7
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCC
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKF 82 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~ 82 (335)
|+|+|||||||||||++|+++|+++|++|++++|++.. ++ ++.+|++|.+++.++++..++
T Consensus 1 m~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-----------------~~--~~~~Dl~d~~~~~~~~~~~~~ 61 (315)
T 2ydy_A 1 MNRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRAR-----------------PK--FEQVNLLDSNAVHHIIHDFQP 61 (315)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC-------------------------------------CHHHHHHHCC
T ss_pred CCCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCC-----------------CC--eEEecCCCHHHHHHHHHhhCC
Confidence 36899999999999999999999999999999985432 11 678999999999998874458
Q ss_pred CEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccCCCCCCCccCCCCCCCCChhHHhHHH
Q 019795 83 EAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQW 162 (335)
Q Consensus 83 d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~Y~~sK~~ 162 (335)
|+|||+|+......+..+++..+++|+.++.+++++|++.++ ++|++||.++|+. ...+++|+++..|.+.|+.+|..
T Consensus 62 d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~v~~~-~~~~~~E~~~~~~~~~Y~~sK~~ 139 (315)
T 2ydy_A 62 HVIVHCAAERRPDVVENQPDAASQLNVDASGNLAKEAAAVGA-FLIYISSDYVFDG-TNPPYREEDIPAPLNLYGKTKLD 139 (315)
T ss_dssp SEEEECC-------------------CHHHHHHHHHHHHHTC-EEEEEEEGGGSCS-SSCSBCTTSCCCCCSHHHHHHHH
T ss_pred CEEEECCcccChhhhhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEchHHHcCC-CCCCCCCCCCCCCcCHHHHHHHH
Confidence 999999998654444567778999999999999999999886 9999999999987 56789999999999999999999
Q ss_pred HHHHHHHHHhhCCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHHHh-CCCCceeEecccCCCCCCceeeeee
Q 019795 163 CEEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAV-GRHPELNVYGQDYPTKDGSAVRDYI 241 (335)
Q Consensus 163 ~E~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~v 241 (335)
+|++++.+ +++++++||++|||+..... ..+.+.+..... .+.+ +.+. +.+.++|+
T Consensus 140 ~e~~~~~~-----~~~~~~lR~~~v~G~~~~~~---------~~~~~~~~~~~~~~~~~-~~~~--------~~~~~~~i 196 (315)
T 2ydy_A 140 GEKAVLEN-----NLGAAVLRIPILYGEVEKLE---------ESAVTVMFDKVQFSNKS-ANMD--------HWQQRFPT 196 (315)
T ss_dssp HHHHHHHH-----CTTCEEEEECSEECSCSSGG---------GSTTGGGHHHHHCCSSC-EEEE--------CSSBBCCE
T ss_pred HHHHHHHh-----CCCeEEEeeeeeeCCCCccc---------ccHHHHHHHHHHhcCCC-eeec--------cCceECcE
Confidence 99999876 45678999999999854310 012232233332 2333 4443 35678999
Q ss_pred eHhhhhc--------------cCceEEecCCccccHHHHHHHHHHHhCCCCC-ceeCCC----CCCccceeeccHHHHHH
Q 019795 242 HVMDLAD--------------GCIAYNLGNGKGISVLEMVAAFEKASGKKIP-IKFCPR----RVGDATAVYAATDKAHK 302 (335)
Q Consensus 242 ~~~D~~~--------------~~~~~nv~~~~~~s~~el~~~i~~~~g~~~~-~~~~~~----~~~~~~~~~~d~~k~~~ 302 (335)
|++|+++ .+++||+++++.+|+.|+++.+.+.+|.+.+ +...+. .........+|++|+++
T Consensus 197 ~v~Dva~a~~~~~~~~~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~ 276 (315)
T 2ydy_A 197 HVKDVATVCRQLAEKRMLDPSIKGTFHWSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPVLGAQRPRNAQLDCSKLET 276 (315)
T ss_dssp EHHHHHHHHHHHHHHHHTCTTCCEEEECCCSCCBCHHHHHHHHHHHTTCCCTTEEEECSCCCSSSCCCSBCCBCCHHHHH
T ss_pred EHHHHHHHHHHHHHhhccccCCCCeEEEcCCCcccHHHHHHHHHHHhCCChhheeccccccccccCCCcccccchHHHHh
Confidence 9999986 2579999999999999999999999998765 322221 12233567899999988
Q ss_pred hcCCccccCHHHHHHHHHHHHhcCC
Q 019795 303 ELGWKPKYGIEDMCAHQWNWAKNNP 327 (335)
Q Consensus 303 ~Lg~~p~~~~~~~~~~~~~~~~~~~ 327 (335)
. ||+|.++++++|+++++|+++++
T Consensus 277 ~-G~~p~~~~~~~l~~~~~~~~~~~ 300 (315)
T 2ydy_A 277 L-GIGQRTPFRIGIKESLWPFLIDK 300 (315)
T ss_dssp T-TCCCCCCHHHHHHHHHGGGCC--
T ss_pred c-CCCCCCCHHHHHHHHHHHHccch
Confidence 7 99999999999999999999875
|
| >2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-41 Score=304.91 Aligned_cols=292 Identities=20% Similarity=0.267 Sum_probs=229.9
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCC-------CeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHH
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGG-------FKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLD 74 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~ 74 (335)
+++|+|||||||||||++|+++|+++| ++|++++|+...... . ...++.++.+|++|.+++.
T Consensus 12 ~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~-------~----~~~~~~~~~~Dl~d~~~~~ 80 (342)
T 2hrz_A 12 FQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPA-------G----FSGAVDARAADLSAPGEAE 80 (342)
T ss_dssp CSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCT-------T----CCSEEEEEECCTTSTTHHH
T ss_pred ccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCcccc-------c----cCCceeEEEcCCCCHHHHH
Confidence 567899999999999999999999999 899999997643321 0 1157889999999999999
Q ss_pred HHHhcCCCCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcC-----CCEEEEeccccccCCCCCCCccCCCC
Q 019795 75 KLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYN-----CKKLVFSSSATIYGQPEKIPCVEDFP 149 (335)
Q Consensus 75 ~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-----~~~~v~~Ss~~vyg~~~~~~~~e~~~ 149 (335)
++++ .++|+|||+|+.... .+.++++..+++|+.++.+++++|++.+ +++||++||.++||.....+++|+++
T Consensus 81 ~~~~-~~~d~vih~A~~~~~-~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~E~~~ 158 (342)
T 2hrz_A 81 KLVE-ARPDVIFHLAAIVSG-EAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSIAVFGAPLPYPIPDEFH 158 (342)
T ss_dssp HHHH-TCCSEEEECCCCCHH-HHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGCCSSCCSSBCTTCC
T ss_pred HHHh-cCCCEEEECCccCcc-cccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCchHhhCCCCCCCcCCCCC
Confidence 9885 379999999998642 3456788899999999999999998875 78999999999998765678999999
Q ss_pred CCCCChhHHhHHHHHHHHHHHHhhCCCCeEEEEecccccC-CCCCCCCCCCCCCCCCChHHH-HHHHHhCCCCceeEecc
Q 019795 150 YGAMNPYGRTKQWCEEIAFDVQKADPEWRIILLRYFNPVG-AHESGKLGEDPKGIPNNLMPY-IQQVAVGRHPELNVYGQ 227 (335)
Q Consensus 150 ~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~lR~~~v~G-~~~~~~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~ 227 (335)
..|.+.|+.+|.++|.+++.+..++ +++.+++|++++|| |... . .....+++. +.....+. + +.+++
T Consensus 159 ~~~~~~Y~~sK~~~e~~~~~~~~~~-~~~~~~ir~~~v~g~pg~~------~-~~~~~~~~~~~~~~~~~~-~-~~~~~- 227 (342)
T 2hrz_A 159 TTPLTSYGTQKAICELLLSDYSRRG-FFDGIGIRLPTICIRPGKP------N-AAASGFFSNILREPLVGQ-E-AVLPV- 227 (342)
T ss_dssp CCCSSHHHHHHHHHHHHHHHHHHTT-SCEEEEEEECEETTCCSSC------C-CSGGGHHHHHHHHHHTTC-C-EEECS-
T ss_pred CCCcchHHHHHHHHHHHHHHHHHhc-CCCceeEEeeeEEecCCCC------c-chhHHHHHHHHHHHhcCC-C-eeccC-
Confidence 9999999999999999999988876 89999999999998 5321 1 111234444 34444444 3 34444
Q ss_pred cCCCCCCceeeeeeeHhhhhc--------------cCceEEecCCccccHHHHHHHHHHHhCCCC--CceeCCCCCC---
Q 019795 228 DYPTKDGSAVRDYIHVMDLAD--------------GCIAYNLGNGKGISVLEMVAAFEKASGKKI--PIKFCPRRVG--- 288 (335)
Q Consensus 228 ~~~~~~~~~~~~~v~~~D~~~--------------~~~~~nv~~~~~~s~~el~~~i~~~~g~~~--~~~~~~~~~~--- 288 (335)
++...++++|++|+++ .+++||++ ++.+|+.|+++.+.+.+|.+. .+...+....
T Consensus 228 -----~~~~~~~~~~v~Dva~~~~~~~~~~~~~~~~~~~~ni~-g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~ 301 (342)
T 2hrz_A 228 -----PESIRHWHASPRSAVGFLIHGAMIDVEKVGPRRNLSMP-GLSATVGEQIEALRKVAGEKAVALIRREPNEMIMRM 301 (342)
T ss_dssp -----CTTCEEEEECHHHHHHHHHHHHHSCHHHHCSCCEEECC-CEEEEHHHHHHHHHHHHCHHHHTTEEECCCHHHHHH
T ss_pred -----CCccceeeEehHHHHHHHHHHHhccccccCCccEEEcC-CCCCCHHHHHHHHHHHcCcccccceeeccCcchhhh
Confidence 4566788999999986 15799995 678999999999999998664 2333332110
Q ss_pred -ccceeeccHHHHHHhcCCccccCHHHHHHHHHHHHh
Q 019795 289 -DATAVYAATDKAHKELGWKPKYGIEDMCAHQWNWAK 324 (335)
Q Consensus 289 -~~~~~~~d~~k~~~~Lg~~p~~~~~~~~~~~~~~~~ 324 (335)
......+|++|+++ |||+|+++++++|+++++|++
T Consensus 302 ~~~~~~~~d~~k~~~-lG~~p~~~l~e~l~~~~~~~~ 337 (342)
T 2hrz_A 302 CEGWAPGFEAKRARE-LGFTAESSFEEIIQVHIEDEL 337 (342)
T ss_dssp HTTSCCCBCCHHHHH-TTCCCCSSHHHHHHHHHHHHS
T ss_pred hcccccccChHHHHH-cCCCCCCCHHHHHHHHHHHhc
Confidence 01123589999988 999999999999999999998
|
| >3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-40 Score=291.85 Aligned_cols=260 Identities=15% Similarity=0.139 Sum_probs=207.1
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCC
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKF 82 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~ 82 (335)
|||+|||||| ||||++|+++|+++|++|++++|++..... +.. .+++++.+|++|.+ +. ++
T Consensus 4 m~~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----~~~-------~~~~~~~~D~~d~~-----~~--~~ 64 (286)
T 3ius_A 4 MTGTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQMEA----IRA-------SGAEPLLWPGEEPS-----LD--GV 64 (286)
T ss_dssp -CCEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGGGHHH----HHH-------TTEEEEESSSSCCC-----CT--TC
T ss_pred CcCcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChhhhhh----Hhh-------CCCeEEEecccccc-----cC--CC
Confidence 4689999998 999999999999999999999997543322 111 57899999999843 44 89
Q ss_pred CEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHH--cCCCEEEEeccccccCCCCCCCccCCCCCCCCChhHHhH
Q 019795 83 EAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAK--YNCKKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTK 160 (335)
Q Consensus 83 d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~--~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~Y~~sK 160 (335)
|+|||+|+..... . ..+.++++++++ .++++|||+||.++||.....+++|+++..|.+.|+.+|
T Consensus 65 d~vi~~a~~~~~~----~---------~~~~~l~~a~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~E~~~~~p~~~Y~~sK 131 (286)
T 3ius_A 65 THLLISTAPDSGG----D---------PVLAALGDQIAARAAQFRWVGYLSTTAVYGDHDGAWVDETTPLTPTAARGRWR 131 (286)
T ss_dssp CEEEECCCCBTTB----C---------HHHHHHHHHHHHTGGGCSEEEEEEEGGGGCCCTTCEECTTSCCCCCSHHHHHH
T ss_pred CEEEECCCccccc----c---------HHHHHHHHHHHhhcCCceEEEEeecceecCCCCCCCcCCCCCCCCCCHHHHHH
Confidence 9999999975321 1 124678999988 678999999999999988878899999999999999999
Q ss_pred HHHHHHHHHHHhhCCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHHHhCCCCceeEecccCCCCCCceeeee
Q 019795 161 QWCEEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAVRDY 240 (335)
Q Consensus 161 ~~~E~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 240 (335)
..+|++++.+ . +++++++||+++||+..... .....+.. +.+.+ +.+.++|
T Consensus 132 ~~~E~~~~~~---~-~~~~~ilRp~~v~G~~~~~~----------------~~~~~~~~--~~~~~-------~~~~~~~ 182 (286)
T 3ius_A 132 VMAEQQWQAV---P-NLPLHVFRLAGIYGPGRGPF----------------SKLGKGGI--RRIIK-------PGQVFSR 182 (286)
T ss_dssp HHHHHHHHHS---T-TCCEEEEEECEEEBTTBSSS----------------TTSSSSCC--CEEEC-------TTCCBCE
T ss_pred HHHHHHHHhh---c-CCCEEEEeccceECCCchHH----------------HHHhcCCc--cccCC-------CCcccce
Confidence 9999999876 3 89999999999999953310 11122332 34444 4578999
Q ss_pred eeHhhhhc----------cCceEEecCCccccHHHHHHHHHHHhCCCCCceeCC--CCCCc------cceeeccHHHHHH
Q 019795 241 IHVMDLAD----------GCIAYNLGNGKGISVLEMVAAFEKASGKKIPIKFCP--RRVGD------ATAVYAATDKAHK 302 (335)
Q Consensus 241 v~~~D~~~----------~~~~~nv~~~~~~s~~el~~~i~~~~g~~~~~~~~~--~~~~~------~~~~~~d~~k~~~ 302 (335)
+|++|+++ .+++||+++++.+|+.|+++.+.+.+|.+.+..... ....+ .....+|++|+++
T Consensus 183 i~v~Dva~a~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~ 262 (286)
T 3ius_A 183 IHVEDIAQVLAASMARPDPGAVYNVCDDEPVPPQDVIAYAAELQGLPLPPAVDFDKADLTPMARSFYSENKRVRNDRIKE 262 (286)
T ss_dssp EEHHHHHHHHHHHHHSCCTTCEEEECCSCCBCHHHHHHHHHHHHTCCCCCEEEGGGSCCCHHHHHTTSCCCEECCHHHHH
T ss_pred EEHHHHHHHHHHHHhCCCCCCEEEEeCCCCccHHHHHHHHHHHcCCCCCcccchhhhccChhHHHhhcCCceeehHHHHH
Confidence 99999998 467999999999999999999999999876543221 11111 2567889999999
Q ss_pred hcCCcccc-CHHHHHHHHHHHH
Q 019795 303 ELGWKPKY-GIEDMCAHQWNWA 323 (335)
Q Consensus 303 ~Lg~~p~~-~~~~~~~~~~~~~ 323 (335)
.|||+|++ +++++|+++++..
T Consensus 263 ~lG~~p~~p~~~e~l~~~~~~~ 284 (286)
T 3ius_A 263 ELGVRLKYPNYRVGLEALQADA 284 (286)
T ss_dssp TTCCCCSCSSHHHHHHHHHHTC
T ss_pred HhCCCCCcCCHHHHHHHHHHhc
Confidence 99999999 7999999998754
|
| >1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-40 Score=300.16 Aligned_cols=296 Identities=17% Similarity=0.153 Sum_probs=220.0
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEE-EccCCCHHHHHHHHhcC
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFH-VGDLRNKDDLDKLFSSQ 80 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~Dl~d~~~~~~~~~~~ 80 (335)
+++|+|||||||||||++|+++|+++|++|++++|+..........+....+ .++.++ .+|++|.+++.++++
T Consensus 9 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~----~~~~~~~~~D~~d~~~~~~~~~-- 82 (342)
T 1y1p_A 9 PEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYP----GRFETAVVEDMLKQGAYDEVIK-- 82 (342)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHST----TTEEEEECSCTTSTTTTTTTTT--
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCC----CceEEEEecCCcChHHHHHHHc--
Confidence 5678999999999999999999999999999999965432222222211111 467888 799999999999887
Q ss_pred CCCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHH-cCCCEEEEeccccccCCCC----CCCccCCC-------
Q 019795 81 KFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAK-YNCKKLVFSSSATIYGQPE----KIPCVEDF------- 148 (335)
Q Consensus 81 ~~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~-~~~~~~v~~Ss~~vyg~~~----~~~~~e~~------- 148 (335)
++|+|||+|+.... ..++...+++|+.++.+++++|++ .+++++|++||.++|+... ..+++|++
T Consensus 83 ~~d~vih~A~~~~~---~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~ 159 (342)
T 1y1p_A 83 GAAGVAHIASVVSF---SNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESID 159 (342)
T ss_dssp TCSEEEECCCCCSC---CSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHHH
T ss_pred CCCEEEEeCCCCCC---CCCHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEeccHHHhcCCCCCCCCcccCccccCchhhh
Confidence 89999999997543 246778999999999999999985 5788999999999986432 15677776
Q ss_pred ---------CCCCCChhHHhHHHHHHHHHHHHhhC-CCCeEEEEecccccCCCCCCCCCCCCCCCCCChHH-HHHHHHhC
Q 019795 149 ---------PYGAMNPYGRTKQWCEEIAFDVQKAD-PEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMP-YIQQVAVG 217 (335)
Q Consensus 149 ---------~~~~~~~Y~~sK~~~E~~~~~~~~~~-~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~-~~~~~~~~ 217 (335)
+..|.+.|+.+|.++|.+++.++.++ ++++++++||+++||+...... .....+ ++..+..+
T Consensus 160 ~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~rp~~v~g~~~~~~~-------~~~~~~~~~~~~~~~ 232 (342)
T 1y1p_A 160 KAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPET-------QSGSTSGWMMSLFNG 232 (342)
T ss_dssp HHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTT-------CCCHHHHHHHHHHTT
T ss_pred hhccccccccccchHHHHHHHHHHHHHHHHHHHhcCCCceEEEEcCCceECCCCCCCC-------CCccHHHHHHHHHcC
Confidence 23455789999999999999988764 3788999999999999543110 111334 45555555
Q ss_pred CCCceeEecccCCCCCCceeeeeeeHhhhhc-----------cCceEEecCCccccHHHHHHHHHHHhCCCCCceeCCCC
Q 019795 218 RHPELNVYGQDYPTKDGSAVRDYIHVMDLAD-----------GCIAYNLGNGKGISVLEMVAAFEKASGKKIPIKFCPRR 286 (335)
Q Consensus 218 ~~~~~~~~g~~~~~~~~~~~~~~v~~~D~~~-----------~~~~~nv~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~ 286 (335)
.. +.+++ ++ +.++|+|++|+|+ .++.+ +++++.+|+.|+++.+.+.+|.+ .+. .+..
T Consensus 233 ~~--~~~~~------~~-~~~~~v~v~Dva~a~~~~~~~~~~~g~~~-~~~g~~~s~~e~~~~i~~~~~~~-~~~-~~~~ 300 (342)
T 1y1p_A 233 EV--SPALA------LM-PPQYYVSAVDIGLLHLGCLVLPQIERRRV-YGTAGTFDWNTVLATFRKLYPSK-TFP-ADFP 300 (342)
T ss_dssp CC--CHHHH------TC-CSEEEEEHHHHHHHHHHHHHCTTCCSCEE-EECCEEECHHHHHHHHHHHCTTS-CCC-CCCC
T ss_pred CC--ccccc------cC-CcCCEeEHHHHHHHHHHHHcCcccCCceE-EEeCCCCCHHHHHHHHHHHCCCc-cCC-CCCC
Confidence 44 33444 33 6789999999987 13334 55678899999999999999864 111 1111
Q ss_pred CCccceeeccHHHHHHhcCC---ccccCHHHHHHHHHHHHhc
Q 019795 287 VGDATAVYAATDKAHKELGW---KPKYGIEDMCAHQWNWAKN 325 (335)
Q Consensus 287 ~~~~~~~~~d~~k~~~~Lg~---~p~~~~~~~~~~~~~~~~~ 325 (335)
........+|++|+++.||| .+.++++++|+++++|+++
T Consensus 301 ~~~~~~~~~d~~k~~~~lg~~~~~~~~~l~~~l~~~~~~~~~ 342 (342)
T 1y1p_A 301 DQGQDLSKFDTAPSLEILKSLGRPGWRSIEESIKDLVGSETA 342 (342)
T ss_dssp CCCCCCCEECCHHHHHHHHHTTCCSCCCHHHHHHHHHCCSCC
T ss_pred ccccccccCChHHHHHHHhhcccCCcCCHHHHHHHHHHHhhC
Confidence 11223467899999999987 4666999999999998753
|
| >2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-38 Score=291.46 Aligned_cols=286 Identities=17% Similarity=0.139 Sum_probs=223.6
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhCC-----CeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHh
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQGG-----FKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFS 78 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~g-----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~ 78 (335)
+|+|||||||||||++|+++|+++| ++|++++|+..... + . ..++.++.+|++|.+++.++++
T Consensus 1 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~-----~---~----~~~~~~~~~Dl~d~~~~~~~~~ 68 (364)
T 2v6g_A 1 SSVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW-----H---E----DNPINYVQCDISDPDDSQAKLS 68 (364)
T ss_dssp CEEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC-----C---C----SSCCEEEECCTTSHHHHHHHHT
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc-----c---c----cCceEEEEeecCCHHHHHHHHh
Confidence 4789999999999999999999999 99999999765432 0 0 1578899999999999999998
Q ss_pred cCC-CCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHc--CCCEEE-------EeccccccCCC--CCCCccC
Q 019795 79 SQK-FEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKY--NCKKLV-------FSSSATIYGQP--EKIPCVE 146 (335)
Q Consensus 79 ~~~-~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~v-------~~Ss~~vyg~~--~~~~~~e 146 (335)
... +|+|||+|+... .++...+++|+.++.+++++|++. +++++| |+||.++||.. ...+++|
T Consensus 69 ~~~~~d~vih~a~~~~-----~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~~g~~i~~Ss~~vyg~~~~~~~~~~E 143 (364)
T 2v6g_A 69 PLTDVTHVFYVTWANR-----STEQENCEANSKMFRNVLDAVIPNCPNLKHISLQTGRKHYMGPFESYGKIESHDPPYTE 143 (364)
T ss_dssp TCTTCCEEEECCCCCC-----SSHHHHHHHHHHHHHHHHHHHTTTCTTCCEEEEECCTHHHHCCGGGTTTSCCCCSSBCT
T ss_pred cCCCCCEEEECCCCCc-----chHHHHHHHhHHHHHHHHHHHHHhccccceEEeccCceEEEechhhccccccCCCCCCc
Confidence 433 999999999752 356789999999999999999987 788997 89999999875 3467889
Q ss_pred CCCCCC-CChhHHhHHHHHHHHHHHHhhCCC-CeEEEEecccccCCCCCCCCCCCCCCCCCChHHH-HHHHH---hCCCC
Q 019795 147 DFPYGA-MNPYGRTKQWCEEIAFDVQKADPE-WRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPY-IQQVA---VGRHP 220 (335)
Q Consensus 147 ~~~~~~-~~~Y~~sK~~~E~~~~~~~~~~~~-~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~-~~~~~---~~~~~ 220 (335)
+.+..| .+.| ..+|++++.+.+++ + ++++++||++|||+.... ....+.+. +...+ .+. +
T Consensus 144 ~~~~~~~~~~y----~~~E~~~~~~~~~~-~~~~~~ilRp~~v~G~~~~~--------~~~~~~~~~~~~~~~~~~g~-~ 209 (364)
T 2v6g_A 144 DLPRLKYMNFY----YDLEDIMLEEVEKK-EGLTWSVHRPGNIFGFSPYS--------MMNLVGTLCVYAAICKHEGK-V 209 (364)
T ss_dssp TSCCCSSCCHH----HHHHHHHHHHHTTS-TTCEEEEEEESSEECCCTTC--------SSCHHHHHHHHHHHHHHHTC-C
T ss_pred cccCCccchhh----HHHHHHHHHHhhcC-CCceEEEECCCceeCCCCCc--------ccchHHHHHHHHHHHHhcCC-c
Confidence 887665 5678 45899998887766 6 999999999999985431 12223343 33333 343 3
Q ss_pred ceeEecccCCCCCC---ceeeeeeeHhhhhc-----------cCceEEecCCccccHHHHHHHHHHHhCCCCCce--eCC
Q 019795 221 ELNVYGQDYPTKDG---SAVRDYIHVMDLAD-----------GCIAYNLGNGKGISVLEMVAAFEKASGKKIPIK--FCP 284 (335)
Q Consensus 221 ~~~~~g~~~~~~~~---~~~~~~v~~~D~~~-----------~~~~~nv~~~~~~s~~el~~~i~~~~g~~~~~~--~~~ 284 (335)
+.++| ++ ....+++|++|+++ .+++||+++++.+|+.|+++.+.+.+|.+.... ..|
T Consensus 210 -~~~~g------~~~~~~~~~~~~~v~Dva~a~~~~~~~~~~~g~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~p 282 (364)
T 2v6g_A 210 -LRFTG------CKAAWDGYSDCSDADLIAEHHIWAAVDPYAKNEAFNVSNGDVFKWKHFWKVLAEQFGVECGEYEEGVD 282 (364)
T ss_dssp -BCCCS------CHHHHHSCBCCEEHHHHHHHHHHHHHCGGGTTEEEEECCSCCBCHHHHHHHHHHHHTCCBCCCCTTCC
T ss_pred -eecCC------CcccccccCCCCcHHHHHHHHHHHHhCCCCCCceEEecCCCcCCHHHHHHHHHHHhCCCCCCCCCCCC
Confidence 45566 55 34477888899987 367999999999999999999999999775433 222
Q ss_pred CC----------------------CC---cc-----------ce-eeccHHHHHHhcCCccccCHHHHHHHHHHHHhcCC
Q 019795 285 RR----------------------VG---DA-----------TA-VYAATDKAHKELGWKPKYGIEDMCAHQWNWAKNNP 327 (335)
Q Consensus 285 ~~----------------------~~---~~-----------~~-~~~d~~k~~~~Lg~~p~~~~~~~~~~~~~~~~~~~ 327 (335)
.+ +. .. .. ..+|++|+++ |||+|.++++++++++++|+++++
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~e~l~~~~~~~~~~g 361 (364)
T 2v6g_A 283 LKLQDLMKGKEPVWEEIVRENGLTPTKLKDVGIWWFGDVILGNECFLDSMNKSKE-HGFLGFRNSKNAFISWIDKAKAYK 361 (364)
T ss_dssp CCHHHHTTTCHHHHHHHHHHTTCCCCCHHHHCCHHHHHHHHTSCCCCBCCHHHHH-TTCCCCCCHHHHHHHHHHHHHHTT
T ss_pred ccHHHHHhhhHHHHHHHHHHhCCCccccccccccchhhhccccchhhcchHHHHh-cCCCCCCCHHHHHHHHHHHHHHcC
Confidence 21 11 11 23 5799999987 999998899999999999999876
Q ss_pred C
Q 019795 328 M 328 (335)
Q Consensus 328 ~ 328 (335)
.
T Consensus 362 ~ 362 (364)
T 2v6g_A 362 I 362 (364)
T ss_dssp S
T ss_pred C
Confidence 4
|
| >2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-39 Score=290.34 Aligned_cols=297 Identities=20% Similarity=0.272 Sum_probs=211.5
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCC
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKF 82 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~ 82 (335)
++|+|||||||||||++|+++|+++|++|+++.|+....... ..+.... ....++.++.+|++|.+++.++++ ++
T Consensus 4 ~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~-~~~~~~~--~~~~~~~~~~~Dl~d~~~~~~~~~--~~ 78 (337)
T 2c29_D 4 QSETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKV-KHLLDLP--KAETHLTLWKADLADEGSFDEAIK--GC 78 (337)
T ss_dssp --CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHH-HHHHTST--THHHHEEEEECCTTSTTTTHHHHT--TC
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHH-HHHHhcc--cCCCeEEEEEcCCCCHHHHHHHHc--CC
Confidence 468999999999999999999999999999999875532211 1111110 001357899999999999999998 78
Q ss_pred CEEEEcccccchhhhhcCh-HHHHHHhHHHHHHHHHHHHHcC-CCEEEEecccc-ccCCCC-CCCccCCCCC--------
Q 019795 83 EAVIHFGALKAVAESVQHP-FRYFDNNLIGTINLYQAMAKYN-CKKLVFSSSAT-IYGQPE-KIPCVEDFPY-------- 150 (335)
Q Consensus 83 d~vi~~a~~~~~~~~~~~~-~~~~~~nv~~~~~l~~~~~~~~-~~~~v~~Ss~~-vyg~~~-~~~~~e~~~~-------- 150 (335)
|+|||+|+.... ...++ +.++++|+.++.+++++|++.+ +++||++||.+ +|+... ..+++|+.+.
T Consensus 79 d~Vih~A~~~~~--~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~riV~~SS~~~~~~~~~~~~~~~E~~~~~~~~~~~~ 156 (337)
T 2c29_D 79 TGVFHVATPMDF--ESKDPENEVIKPTIEGMLGIMKSCAAAKTVRRLVFTSSAGTVNIQEHQLPVYDESCWSDMEFCRAK 156 (337)
T ss_dssp SEEEECCCCCCS--SCSSHHHHTHHHHHHHHHHHHHHHHHHSCCCEEEEECCGGGTSCSSSCCSEECTTCCCCHHHHHHH
T ss_pred CEEEEeccccCC--CCCChHHHHHHHHHHHHHHHHHHHHhCCCccEEEEeeeHhhcccCCCCCcccCcccCCchhhhccc
Confidence 999999986421 12233 3588999999999999999887 89999999987 555432 2346666432
Q ss_pred -CCCChhHHhHHHHHHHHHHHHhhCCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHHHhCCCCceeEecccC
Q 019795 151 -GAMNPYGRTKQWCEEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDY 229 (335)
Q Consensus 151 -~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 229 (335)
.+.+.|+.||.++|.+++.+.+++ +++++++||++|||+..... ... .+........+... .++
T Consensus 157 ~~~~~~Y~~sK~~~E~~~~~~~~~~-gi~~~~lrp~~v~Gp~~~~~-------~~~-~~~~~~~~~~g~~~---~~~--- 221 (337)
T 2c29_D 157 KMTAWMYFVSKTLAEQAAWKYAKEN-NIDFITIIPTLVVGPFIMSS-------MPP-SLITALSPITGNEA---HYS--- 221 (337)
T ss_dssp CCTTHHHHHHHHHHHHHHHHHHHHH-TCCEEEEEECEEESCCSCSS-------CCH-HHHHHTHHHHTCGG---GHH---
T ss_pred CCccchHHHHHHHHHHHHHHHHHHc-CCcEEEEeCCceECCCCCCC-------CCc-hHHHHHHHHcCCCc---ccc---
Confidence 144579999999999999887666 99999999999999953211 111 11111111333321 122
Q ss_pred CCCCCceeeeeeeHhhhhc----------cCceEEecCCccccHHHHHHHHHHHhCC-CCCceeCCCCCCccceeeccHH
Q 019795 230 PTKDGSAVRDYIHVMDLAD----------GCIAYNLGNGKGISVLEMVAAFEKASGK-KIPIKFCPRRVGDATAVYAATD 298 (335)
Q Consensus 230 ~~~~~~~~~~~v~~~D~~~----------~~~~~nv~~~~~~s~~el~~~i~~~~g~-~~~~~~~~~~~~~~~~~~~d~~ 298 (335)
.+ ....|+|++|+++ .++.|+++ +..+|+.|+++.+.+.++. +.+....+ ...+.....+|++
T Consensus 222 ---~~-~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~-~~~~s~~e~~~~i~~~~~~~~~~~~~~~-~~~~~~~~~~d~~ 295 (337)
T 2c29_D 222 ---II-RQGQFVHLDDLCNAHIYLFENPKAEGRYICS-SHDCIILDLAKMLREKYPEYNIPTEFKG-VDENLKSVCFSSK 295 (337)
T ss_dssp ---HH-TEEEEEEHHHHHHHHHHHHHCTTCCEEEEEC-CEEEEHHHHHHHHHHHCTTSCCCSCCTT-CCTTCCCCEECCH
T ss_pred ---cc-CCCCEEEHHHHHHHHHHHhcCcccCceEEEe-CCCCCHHHHHHHHHHHCCCccCCCCCCc-ccCCCccccccHH
Confidence 11 2245999999987 24678664 5579999999999998742 23222211 1223456778999
Q ss_pred HHHHhcCCccccCHHHHHHHHHHHHhcCCC
Q 019795 299 KAHKELGWKPKYGIEDMCAHQWNWAKNNPM 328 (335)
Q Consensus 299 k~~~~Lg~~p~~~~~~~~~~~~~~~~~~~~ 328 (335)
|+ +.|||+|+++++++|+++++|+++++.
T Consensus 296 k~-~~lG~~p~~~l~e~l~~~~~~~~~~~~ 324 (337)
T 2c29_D 296 KL-TDLGFEFKYSLEDMFTGAVDTCRAKGL 324 (337)
T ss_dssp HH-HHHTCCCCCCHHHHHHHHHHHHHHTTS
T ss_pred HH-HHcCCCcCCCHHHHHHHHHHHHHHcCC
Confidence 99 789999999999999999999998754
|
| >2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.9e-40 Score=295.41 Aligned_cols=301 Identities=18% Similarity=0.229 Sum_probs=207.4
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCCC
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKFE 83 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~d 83 (335)
+|+|||||||||||++|+++|+++|++|+++.|+....... ..+..+. ...++.++.+|++|.+++.++++ ++|
T Consensus 9 ~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~~-~~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~~--~~D 82 (338)
T 2rh8_A 9 KKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKV-SHLLELQ---ELGDLKIFRADLTDELSFEAPIA--GCD 82 (338)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTTT-HHHHHHG---GGSCEEEEECCTTTSSSSHHHHT--TCS
T ss_pred CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcchhhhH-HHHHhcC---CCCcEEEEecCCCChHHHHHHHc--CCC
Confidence 57899999999999999999999999999998875432211 1111110 01468899999999999999998 789
Q ss_pred EEEEcccccchhhhhcCh-HHHHHHhHHHHHHHHHHHHHcC-CCEEEEecccc-ccCCC---CCCCccCCCCC-------
Q 019795 84 AVIHFGALKAVAESVQHP-FRYFDNNLIGTINLYQAMAKYN-CKKLVFSSSAT-IYGQP---EKIPCVEDFPY------- 150 (335)
Q Consensus 84 ~vi~~a~~~~~~~~~~~~-~~~~~~nv~~~~~l~~~~~~~~-~~~~v~~Ss~~-vyg~~---~~~~~~e~~~~------- 150 (335)
+|||+|+.... ...++ ..++++|+.|+.+++++|++.+ +++||++||.+ +|+.. ...+++|+.+.
T Consensus 83 ~Vih~A~~~~~--~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~r~V~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~ 160 (338)
T 2rh8_A 83 FVFHVATPVHF--ASEDPENDMIKPAIQGVVNVMKACTRAKSVKRVILTSSAAAVTINQLDGTGLVVDEKNWTDIEFLTS 160 (338)
T ss_dssp EEEEESSCCCC-----------CHHHHHHHHHHHHHHHHCTTCCEEEEECCHHHHHHHHHTCSCCCCCTTTTTCC-----
T ss_pred EEEEeCCccCC--CCCCcHHHHHHHHHHHHHHHHHHHHHcCCcCEEEEEecHHHeecCCcCCCCcccChhhccchhhccc
Confidence 99999986422 12233 3489999999999999999985 89999999977 44322 11366776532
Q ss_pred -CC-CChhHHhHHHHHHHHHHHHhhCCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHHHhCCCCceeEeccc
Q 019795 151 -GA-MNPYGRTKQWCEEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQD 228 (335)
Q Consensus 151 -~~-~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 228 (335)
.| .+.|+.||.++|++++.+.+++ +++++++||++|||+..... .+ ..+..+.....+... .++..
T Consensus 161 ~~~~~~~Y~~sK~~~E~~~~~~~~~~-gi~~~~lrp~~v~Gp~~~~~-------~~-~~~~~~~~~~~g~~~---~~~~~ 228 (338)
T 2rh8_A 161 AKPPTWGYPASKTLAEKAAWKFAEEN-NIDLITVIPTLMAGSSLTSD-------VP-SSIGLAMSLITGNEF---LINGM 228 (338)
T ss_dssp --CCCCCCTTSCCHHHHHHHHHHHHH-TCCEEEEEECEEESCCSSSS-------CC-HHHHHHHHHHHTCHH---HHHHH
T ss_pred cCCccchHHHHHHHHHHHHHHHHHHc-CCcEEEEeCCceECCCCCCC-------CC-chHHHHHHHHcCCcc---ccccc
Confidence 11 2269999999999999887766 89999999999999954311 11 122222222333321 11100
Q ss_pred CCCCCCceeeeeeeHhhhhc----------cCceEEecCCccccHHHHHHHHHHHhCC-CCCceeCCCCCCccceeeccH
Q 019795 229 YPTKDGSAVRDYIHVMDLAD----------GCIAYNLGNGKGISVLEMVAAFEKASGK-KIPIKFCPRRVGDATAVYAAT 297 (335)
Q Consensus 229 ~~~~~~~~~~~~v~~~D~~~----------~~~~~nv~~~~~~s~~el~~~i~~~~g~-~~~~~~~~~~~~~~~~~~~d~ 297 (335)
.....+...++|+|++|+++ .++.||+++ ..+|+.|+++.+.+.++. +.+....+ .... ....+|+
T Consensus 229 ~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~-~~~s~~e~~~~l~~~~~~~~~~~~~~~-~~~~-~~~~~d~ 305 (338)
T 2rh8_A 229 KGMQMLSGSVSIAHVEDVCRAHIFVAEKESASGRYICCA-ANTSVPELAKFLSKRYPQYKVPTDFGD-FPPK-SKLIISS 305 (338)
T ss_dssp HHHHHHHSSEEEEEHHHHHHHHHHHHHCTTCCEEEEECS-EEECHHHHHHHHHHHCTTSCCCCCCTT-SCSS-CSCCCCC
T ss_pred cccccccCcccEEEHHHHHHHHHHHHcCCCcCCcEEEec-CCCCHHHHHHHHHHhCCCCCCCCCCCC-CCcC-cceeech
Confidence 00000012248999999987 356798864 569999999999998762 32222111 1111 2378899
Q ss_pred HHHHHhcCCccccCHHHHHHHHHHHHhcCCC
Q 019795 298 DKAHKELGWKPKYGIEDMCAHQWNWAKNNPM 328 (335)
Q Consensus 298 ~k~~~~Lg~~p~~~~~~~~~~~~~~~~~~~~ 328 (335)
+|+ +.|||+|+++++++|+++++|+++++.
T Consensus 306 ~k~-~~lG~~p~~~l~~gl~~~~~~~~~~~~ 335 (338)
T 2rh8_A 306 EKL-VKEGFSFKYGIEEIYDESVEYFKAKGL 335 (338)
T ss_dssp HHH-HHHTCCCSCCHHHHHHHHHHHHHHTTC
T ss_pred HHH-HHhCCCCCCCHHHHHHHHHHHHHHcCC
Confidence 999 679999999999999999999998753
|
| >2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa} | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-38 Score=283.68 Aligned_cols=294 Identities=20% Similarity=0.221 Sum_probs=206.4
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhCCCeEEEEec-CCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCC
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQGGFKVVLIDN-LHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKF 82 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~ 82 (335)
+|+|||||||||||++|+++|+++|++|+++.| ++..... ...+.... ....++.++.+|++|.+++.++++ ++
T Consensus 1 ~k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~-~~~~~~~~--~~~~~~~~~~~Dl~d~~~~~~~~~--~~ 75 (322)
T 2p4h_X 1 KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRD-VSFLTNLP--GASEKLHFFNADLSNPDSFAAAIE--GC 75 (322)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC----CC-CHHHHTST--THHHHEEECCCCTTCGGGGHHHHT--TC
T ss_pred CCEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCccchhH-HHHHHhhh--ccCCceEEEecCCCCHHHHHHHHc--CC
Confidence 579999999999999999999999999999988 4322111 11111110 001357889999999999999998 78
Q ss_pred CEEEEcccccchhhhhcC-hHHHHHHhHHHHHHHHHHHHHc-CCCEEEEeccccc-cCCCC-CCCccCCCCC--------
Q 019795 83 EAVIHFGALKAVAESVQH-PFRYFDNNLIGTINLYQAMAKY-NCKKLVFSSSATI-YGQPE-KIPCVEDFPY-------- 150 (335)
Q Consensus 83 d~vi~~a~~~~~~~~~~~-~~~~~~~nv~~~~~l~~~~~~~-~~~~~v~~Ss~~v-yg~~~-~~~~~e~~~~-------- 150 (335)
|+|||+|+... ....+ .+.++++|+.++.+++++|++. ++++||++||.++ |+... ..+++|+.+.
T Consensus 76 d~vih~A~~~~--~~~~~~~~~~~~~nv~gt~~l~~aa~~~~~~~~iV~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~ 153 (322)
T 2p4h_X 76 VGIFHTASPID--FAVSEPEEIVTKRTVDGALGILKACVNSKTVKRFIYTSSGSAVSFNGKDKDVLDESDWSDVDLLRSV 153 (322)
T ss_dssp SEEEECCCCC----------CHHHHHHHHHHHHHHHHHTTCSSCCEEEEEEEGGGTSCSSSCCSEECTTCCCCHHHHHHH
T ss_pred CEEEEcCCccc--CCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccHHHcccCCCCCeecCCccccchhhhccc
Confidence 99999997531 12222 2358999999999999999987 7899999999874 44322 2356666532
Q ss_pred CCCC-hhHHhHHHHHHHHHHHHhhCCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHHHhCCCCceeEecccC
Q 019795 151 GAMN-PYGRTKQWCEEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDY 229 (335)
Q Consensus 151 ~~~~-~Y~~sK~~~E~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 229 (335)
.|.. .|+.||.++|.+++++.+++ +++++++||++|||+..... .. .....+.....+... . ++
T Consensus 154 ~p~~~~Y~~sK~~~e~~~~~~~~~~-gi~~~~lrp~~v~g~~~~~~-------~~-~~~~~~~~~~~g~~~--~-~~--- 218 (322)
T 2p4h_X 154 KPFGWNYAVSKTLAEKAVLEFGEQN-GIDVVTLILPFIVGRFVCPK-------LP-DSIEKALVLVLGKKE--Q-IG--- 218 (322)
T ss_dssp CCTTHHHHHHHHHHHHHHHHHHHHT-TCCEEEEEECEEESCCCSSS-------CC-HHHHHHTHHHHSCGG--G-CC---
T ss_pred CcccccHHHHHHHHHHHHHHHHHhc-CCcEEEEcCCceECCCCCCC-------CC-chHHHHHHHHhCCCc--c-Cc---
Confidence 2333 69999999999999888776 99999999999999953211 01 122222233344322 1 11
Q ss_pred CCCCCceeeeeeeHhhhhc----------cCceEEecCCccccHHHHHHHHHHHhCC-CCCcee-CCCCCCccceeeccH
Q 019795 230 PTKDGSAVRDYIHVMDLAD----------GCIAYNLGNGKGISVLEMVAAFEKASGK-KIPIKF-CPRRVGDATAVYAAT 297 (335)
Q Consensus 230 ~~~~~~~~~~~v~~~D~~~----------~~~~~nv~~~~~~s~~el~~~i~~~~g~-~~~~~~-~~~~~~~~~~~~~d~ 297 (335)
+ ..++|+|++|+++ ..+.|| ++++.+|+.|+++.+.+.++. +++... ..... ......+|+
T Consensus 219 ---~--~~~~~i~v~Dva~a~~~~~~~~~~~g~~~-~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~-~~~~~~~d~ 291 (322)
T 2p4h_X 219 ---V--TRFHMVHVDDVARAHIYLLENSVPGGRYN-CSPFIVPIEEMSQLLSAKYPEYQILTVDELKEIK-GARLPDLNT 291 (322)
T ss_dssp ---E--EEEEEEEHHHHHHHHHHHHHSCCCCEEEE-CCCEEEEHHHHHHHHHHHCTTSCCCCTTTTTTCC-CEECCEECC
T ss_pred ---C--CCcCEEEHHHHHHHHHHHhhCcCCCCCEE-EcCCCCCHHHHHHHHHHhCCCCCCCCCccccCCC-CCcceeccc
Confidence 2 3348999999987 234698 577889999999999988742 222110 01111 114578899
Q ss_pred HHHHHhcCCccccCHHHHHHHHHHHHhcCC
Q 019795 298 DKAHKELGWKPKYGIEDMCAHQWNWAKNNP 327 (335)
Q Consensus 298 ~k~~~~Lg~~p~~~~~~~~~~~~~~~~~~~ 327 (335)
+|+ +.|||+|+++++++|+++++|+++++
T Consensus 292 ~k~-~~lG~~p~~~~~~~l~~~~~~~~~~~ 320 (322)
T 2p4h_X 292 KKL-VDAGFDFKYTIEDMFDDAIQCCKEKG 320 (322)
T ss_dssp HHH-HHTTCCCCCCHHHHHHHHHHHHHHHT
T ss_pred HHH-HHhCCccCCCHHHHHHHHHHHHHhcC
Confidence 999 67999999999999999999998764
|
| >2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-37 Score=269.06 Aligned_cols=258 Identities=15% Similarity=0.129 Sum_probs=207.2
Q ss_pred CeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCCCE
Q 019795 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKFEA 84 (335)
Q Consensus 5 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~d~ 84 (335)
|+|||||||||||++++++|++ |++|++++|++... .+ +.+|++|++++.++++..++|+
T Consensus 1 m~ilVtGatG~iG~~l~~~L~~-g~~V~~~~r~~~~~----------------~~---~~~Dl~~~~~~~~~~~~~~~d~ 60 (273)
T 2ggs_A 1 MRTLITGASGQLGIELSRLLSE-RHEVIKVYNSSEIQ----------------GG---YKLDLTDFPRLEDFIIKKRPDV 60 (273)
T ss_dssp CCEEEETTTSHHHHHHHHHHTT-TSCEEEEESSSCCT----------------TC---EECCTTSHHHHHHHHHHHCCSE
T ss_pred CEEEEECCCChhHHHHHHHHhc-CCeEEEecCCCcCC----------------CC---ceeccCCHHHHHHHHHhcCCCE
Confidence 4799999999999999999994 89999999975320 11 7899999999999998445999
Q ss_pred EEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccCCCCCCCccCCCCCCCCChhHHhHHHHH
Q 019795 85 VIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQWCE 164 (335)
Q Consensus 85 vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~Y~~sK~~~E 164 (335)
|||+|+......+.++++..+++|+.++.+++++|++.+. ++|++||.++|+.... +++|+++..|.+.|+.+|..+|
T Consensus 61 vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~iv~~SS~~~~~~~~~-~~~e~~~~~~~~~Y~~sK~~~e 138 (273)
T 2ggs_A 61 IINAAAMTDVDKCEIEKEKAYKINAEAVRHIVRAGKVIDS-YIVHISTDYVFDGEKG-NYKEEDIPNPINYYGLSKLLGE 138 (273)
T ss_dssp EEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTC-EEEEEEEGGGSCSSSC-SBCTTSCCCCSSHHHHHHHHHH
T ss_pred EEECCcccChhhhhhCHHHHHHHhHHHHHHHHHHHHHhCC-eEEEEecceeEcCCCC-CcCCCCCCCCCCHHHHHHHHHH
Confidence 9999998665555678889999999999999999998876 9999999999976543 7899999888899999999999
Q ss_pred HHHHHHHhhCCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHHHhCCCCceeEecccCCCCCCceeeeeeeHh
Q 019795 165 EIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAVRDYIHVM 244 (335)
Q Consensus 165 ~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~v~~~ 244 (335)
.+++. ++++++||+.+||+ ..+.+.+......+.+ +.+.+ + .++|+|++
T Consensus 139 ~~~~~-------~~~~~iR~~~v~G~--------------~~~~~~~~~~~~~~~~-~~~~~------~---~~~~~~~~ 187 (273)
T 2ggs_A 139 TFALQ-------DDSLIIRTSGIFRN--------------KGFPIYVYKTLKEGKT-VFAFK------G---YYSPISAR 187 (273)
T ss_dssp HHHCC-------TTCEEEEECCCBSS--------------SSHHHHHHHHHHTTCC-EEEES------C---EECCCBHH
T ss_pred HHHhC-------CCeEEEeccccccc--------------cHHHHHHHHHHHcCCC-EEeec------C---CCCceEHH
Confidence 99864 45789999999983 1144444333333333 45555 2 78999999
Q ss_pred hhhc---------cCceEEecCCccccHHHHHHHHHHHhCCCCCceeCC----CCCCccceeeccHHHHHHhcCCcc-cc
Q 019795 245 DLAD---------GCIAYNLGNGKGISVLEMVAAFEKASGKKIPIKFCP----RRVGDATAVYAATDKAHKELGWKP-KY 310 (335)
Q Consensus 245 D~~~---------~~~~~nv~~~~~~s~~el~~~i~~~~g~~~~~~~~~----~~~~~~~~~~~d~~k~~~~Lg~~p-~~ 310 (335)
|+++ .+++||+++ +.+|+.|+++.+.+.+|.+.++.... ..........+|++|+++.|||+| .+
T Consensus 188 dva~~i~~~~~~~~~g~~~i~~-~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~ 266 (273)
T 2ggs_A 188 KLASAILELLELRKTGIIHVAG-ERISRFELALKIKEKFNLPGEVKEVDEVRGWIAKRPYDSSLDSSRARKILSTDFYTL 266 (273)
T ss_dssp HHHHHHHHHHHHTCCEEEECCC-CCEEHHHHHHHHHHHTTCCSCEEEESSCTTCCSCCCSBCCBCCHHHHHHCSSCCCSC
T ss_pred HHHHHHHHHHhcCcCCeEEECC-CcccHHHHHHHHHHHhCCChhhcccccccccccCCCcccccCHHHHHHHhCCCCCCc
Confidence 9997 356999998 99999999999999999886554221 112234567899999999999999 57
Q ss_pred CHHHHH
Q 019795 311 GIEDMC 316 (335)
Q Consensus 311 ~~~~~~ 316 (335)
++++++
T Consensus 267 ~l~~~~ 272 (273)
T 2ggs_A 267 DLDGMV 272 (273)
T ss_dssp CGGGCC
T ss_pred cccccc
Confidence 888764
|
| >4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-37 Score=273.30 Aligned_cols=265 Identities=20% Similarity=0.191 Sum_probs=200.3
Q ss_pred CeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCCCE
Q 019795 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKFEA 84 (335)
Q Consensus 5 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~d~ 84 (335)
|+|||||||||||++|+++|+++||+|++++|++... . +..| +...+.++ ++|+
T Consensus 1 MkILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~~-----------------~---~~~~----~~~~~~l~--~~d~ 54 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGPG-----------------R---ITWD----ELAASGLP--SCDA 54 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTT-----------------E---EEHH----HHHHHCCC--SCSE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCcC-----------------e---eecc----hhhHhhcc--CCCE
Confidence 5799999999999999999999999999999965431 1 1222 11223344 7999
Q ss_pred EEEcccccchh----hhhcChHHHHHHhHHHHHHHHHHHHHcCC--CEEEEeccccccCCCCCCCccCCCCCCCCChhHH
Q 019795 85 VIHFGALKAVA----ESVQHPFRYFDNNLIGTINLYQAMAKYNC--KKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGR 158 (335)
Q Consensus 85 vi~~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~~~~--~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~Y~~ 158 (335)
|||+|+..... .+......+++.|+.+|.+++++++..+. .++|+.||+++||.....+.+|+++..+.+.|+.
T Consensus 55 vihla~~~i~~~~~~~~~~~~~~~~~~~v~~t~~l~~~~~~~~~~~~~~i~~Ss~~vyg~~~~~~~~E~~p~~~~~~~~~ 134 (298)
T 4b4o_A 55 AVNLAGENILNPLRRWNETFQKEVLGSRLETTQLLAKAITKAPQPPKAWVLVTGVAYYQPSLTAEYDEDSPGGDFDFFSN 134 (298)
T ss_dssp EEECCCCCSSCTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHCSSCCSEEEEEEEGGGSCCCSSCCBCTTCCCSCSSHHHH
T ss_pred EEEeccCcccchhhhhhhhhhhhhhhHHHHHHHHHHHHHHHhCCCceEEEEEeeeeeecCCCCCcccccCCccccchhHH
Confidence 99999853221 12233456788999999999999988764 4689999999999998899999999999888988
Q ss_pred hHHHHHHHHHHHHhhCCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHH-HHHHHhCCCCceeEecccCCCCCCcee
Q 019795 159 TKQWCEEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPY-IQQVAVGRHPELNVYGQDYPTKDGSAV 237 (335)
Q Consensus 159 sK~~~E~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~ 237 (335)
.|...|... ..... +++++++||+.|||+.. ..... +.....+.. ...| ++.+.
T Consensus 135 ~~~~~e~~~--~~~~~-~~~~~~~r~~~v~g~~~-------------~~~~~~~~~~~~~~~---~~~g------~g~~~ 189 (298)
T 4b4o_A 135 LVTKWEAAA--RLPGD-STRQVVVRSGVVLGRGG-------------GAMGHMLLPFRLGLG---GPIG------SGHQF 189 (298)
T ss_dssp HHHHHHHHH--CCSSS-SSEEEEEEECEEECTTS-------------HHHHHHHHHHHTTCC---CCBT------TSCSB
T ss_pred HHHHHHHHH--Hhhcc-CCceeeeeeeeEEcCCC-------------CchhHHHHHHhcCCc---ceec------ccCce
Confidence 888777653 22333 89999999999999842 23333 333334432 3456 78999
Q ss_pred eeeeeHhhhhc----------cCceEEecCCccccHHHHHHHHHHHhCCCCCceeCCCCC-----C-c-----cceeecc
Q 019795 238 RDYIHVMDLAD----------GCIAYNLGNGKGISVLEMVAAFEKASGKKIPIKFCPRRV-----G-D-----ATAVYAA 296 (335)
Q Consensus 238 ~~~v~~~D~~~----------~~~~~nv~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~-----~-~-----~~~~~~d 296 (335)
++|||++|+++ ..++||+++++++|+.|+++.+.+.+|++..+ ..|... + . ......+
T Consensus 190 ~~~ihv~Dva~a~~~~~~~~~~~g~yn~~~~~~~t~~e~~~~ia~~lgrp~~~-pvP~~~~~~~~g~~~~~~~l~~~rv~ 268 (298)
T 4b4o_A 190 FPWIHIGDLAGILTHALEANHVHGVLNGVAPSSATNAEFAQTFGAALGRRAFI-PLPSAVVQAVFGRQRAIMLLEGQKVI 268 (298)
T ss_dssp CCEEEHHHHHHHHHHHHHCTTCCEEEEESCSCCCBHHHHHHHHHHHHTCCCCC-CBCHHHHHHHHCHHHHHHHHCCCCBC
T ss_pred eecCcHHHHHHHHHHHHhCCCCCCeEEEECCCccCHHHHHHHHHHHhCcCCcc-cCCHHHHHHHhcchhHHHhhCCCEEc
Confidence 99999999998 46799999999999999999999999976532 233211 0 0 1345577
Q ss_pred HHHHHHhcCCcccc-CHHHHHHHHHHH
Q 019795 297 TDKAHKELGWKPKY-GIEDMCAHQWNW 322 (335)
Q Consensus 297 ~~k~~~~Lg~~p~~-~~~~~~~~~~~~ 322 (335)
++|+ +++||+++| +++++|++.++.
T Consensus 269 ~~kl-~~~Gf~f~yp~l~~al~~l~~~ 294 (298)
T 4b4o_A 269 PRRT-LATGYQYSFPELGAALKEIAEN 294 (298)
T ss_dssp CHHH-HHTTCCCSCCSHHHHHHHHHHC
T ss_pred HHHH-HHCCCCCCCCCHHHHHHHHHHh
Confidence 8899 479999999 699999998874
|
| >3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-36 Score=287.76 Aligned_cols=271 Identities=16% Similarity=0.195 Sum_probs=201.5
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCCC
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKFE 83 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~d 83 (335)
+|+|||||||||||++|++.|+++|++|++++|+.... ..+.+|+.+. +.++++ ++|
T Consensus 147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~-------------------~~v~~d~~~~--~~~~l~--~~D 203 (516)
T 3oh8_A 147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKP-------------------GKRFWDPLNP--ASDLLD--GAD 203 (516)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCT-------------------TCEECCTTSC--CTTTTT--TCS
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCc-------------------cceeecccch--hHHhcC--CCC
Confidence 78999999999999999999999999999999976542 1256677643 344555 899
Q ss_pred EEEEcccccchh-hhhcChHHHHHHhHHHHHHHHHH-HHHcCCCEEEEeccccccC-CCCCCCccCCCCCCCCChhHHhH
Q 019795 84 AVIHFGALKAVA-ESVQHPFRYFDNNLIGTINLYQA-MAKYNCKKLVFSSSATIYG-QPEKIPCVEDFPYGAMNPYGRTK 160 (335)
Q Consensus 84 ~vi~~a~~~~~~-~~~~~~~~~~~~nv~~~~~l~~~-~~~~~~~~~v~~Ss~~vyg-~~~~~~~~e~~~~~~~~~Y~~sK 160 (335)
+|||+|+..... .....+..++++|+.++.+++++ ++..++++||++||+++|| .....+++|+.+. +.+.|+.+|
T Consensus 204 ~Vih~A~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~a~~~~~~r~V~~SS~~vyg~~~~~~~~~E~~~~-~~~~y~~~~ 282 (516)
T 3oh8_A 204 VLVHLAGEPIFGRFNDSHKEAIRESRVLPTKFLAELVAESTQCTTMISASAVGFYGHDRGDEILTEESES-GDDFLAEVC 282 (516)
T ss_dssp EEEECCCC-----CCGGGHHHHHHHTHHHHHHHHHHHHHCSSCCEEEEEEEGGGGCSEEEEEEECTTSCC-CSSHHHHHH
T ss_pred EEEECCCCccccccchhHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCcceEecCCCCCCccCCCCCC-CcChHHHHH
Confidence 999999985332 23455678899999999999999 5666789999999999998 4555678888877 778899999
Q ss_pred HHHHHHHHHHHhhCCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHHHhCCCCceeEecccCCCCCCceeeee
Q 019795 161 QWCEEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAVRDY 240 (335)
Q Consensus 161 ~~~E~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 240 (335)
...|.++..+ ... +++++++||++|||+. ..+.+.+......+.. .++| ++.+.++|
T Consensus 283 ~~~E~~~~~~-~~~-gi~~~ilRp~~v~Gp~-------------~~~~~~~~~~~~~g~~--~~~g------~g~~~~~~ 339 (516)
T 3oh8_A 283 RDWEHATAPA-SDA-GKRVAFIRTGVALSGR-------------GGMLPLLKTLFSTGLG--GKFG------DGTSWFSW 339 (516)
T ss_dssp HHHHHTTHHH-HHT-TCEEEEEEECEEEBTT-------------BSHHHHHHHTTC---C--CCCT------TSCCEECE
T ss_pred HHHHHHHHHH-HhC-CCCEEEEEeeEEECCC-------------CChHHHHHHHHHhCCC--cccC------CCCceEce
Confidence 9999887644 444 9999999999999984 1244554443332222 2445 78899999
Q ss_pred eeHhhhhc----------cCceEEecCCccccHHHHHHHHHHHhCCCCCceeCCCCC-----Cc-------cceeeccHH
Q 019795 241 IHVMDLAD----------GCIAYNLGNGKGISVLEMVAAFEKASGKKIPIKFCPRRV-----GD-------ATAVYAATD 298 (335)
Q Consensus 241 v~~~D~~~----------~~~~~nv~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~-----~~-------~~~~~~d~~ 298 (335)
+|++|+++ ..++||+++++.+|+.|+++.+.+.+|.+..+ ..|... .+ ......+++
T Consensus 340 i~v~Dva~ai~~~l~~~~~~g~~ni~~~~~~s~~el~~~i~~~~g~~~~~-~~p~~~~~~~~g~~~~~~~~~~~~~~~~~ 418 (516)
T 3oh8_A 340 IAIDDLTDIYYRAIVDAQISGPINAVAPNPVSNADMTKILATSMHRPAFI-QIPSLGPKILLGSQGAEELALASQRTAPA 418 (516)
T ss_dssp EEHHHHHHHHHHHHHCTTCCEEEEESCSCCEEHHHHHHHTTC----------------------CCGGGGGGCEEEECCH
T ss_pred EeHHHHHHHHHHHHhCcccCCcEEEECCCCCCHHHHHHHHHHHhCCCCCC-CCCHHHHHHHhCCchhHHHhhcCCeechH
Confidence 99999997 36799999999999999999999999976522 222211 11 235567899
Q ss_pred HHHHhcCCccccC-HHHHHHHHHHHH
Q 019795 299 KAHKELGWKPKYG-IEDMCAHQWNWA 323 (335)
Q Consensus 299 k~~~~Lg~~p~~~-~~~~~~~~~~~~ 323 (335)
|++ .|||+|+++ ++++|+++++..
T Consensus 419 kl~-~lG~~~~~~~l~e~l~~~l~~~ 443 (516)
T 3oh8_A 419 ALE-NLSHTFRYTDIGAAIAHELGYE 443 (516)
T ss_dssp HHH-HTTCCCSCSSHHHHHHHHHTCC
T ss_pred HHH-HCCCCCCCCCHHHHHHHHhCcc
Confidence 996 799999996 999999998754
|
| >2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-34 Score=262.71 Aligned_cols=261 Identities=20% Similarity=0.335 Sum_probs=199.2
Q ss_pred CCCCCeEEEEcCCChhhHHHHHHHHhC-CC-eEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHh
Q 019795 1 MASEKNILVTGGAGFIGTHCALQLLQG-GF-KVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFS 78 (335)
Q Consensus 1 ~~~~~~vlItGatG~iG~~l~~~L~~~-g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~ 78 (335)
|+++|+|||||||||||++|+++|+++ |+ +|++++|++.+.......+. ..++.++.+|++|.+++.++++
T Consensus 18 ~~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~-------~~~v~~~~~Dl~d~~~l~~~~~ 90 (344)
T 2gn4_A 18 MLDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFN-------DPRMRFFIGDVRDLERLNYALE 90 (344)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHC-------CTTEEEEECCTTCHHHHHHHTT
T ss_pred hhCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhc-------CCCEEEEECCCCCHHHHHHHHh
Confidence 577899999999999999999999999 97 99999996543332222221 1578999999999999999998
Q ss_pred cCCCCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccCCCCCCCccCCCCCCCCChhHH
Q 019795 79 SQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGR 158 (335)
Q Consensus 79 ~~~~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~Y~~ 158 (335)
++|+|||+|+.........++...+++|+.|+.+++++|.+.+++++|++||...+ .|.+.|+.
T Consensus 91 --~~D~Vih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~~v~~~V~~SS~~~~--------------~p~~~Y~~ 154 (344)
T 2gn4_A 91 --GVDICIHAAALKHVPIAEYNPLECIKTNIMGASNVINACLKNAISQVIALSTDKAA--------------NPINLYGA 154 (344)
T ss_dssp --TCSEEEECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCGGGS--------------SCCSHHHH
T ss_pred --cCCEEEECCCCCCCCchhcCHHHHHHHHHHHHHHHHHHHHhCCCCEEEEecCCccC--------------CCccHHHH
Confidence 89999999998765555667889999999999999999999999999999997654 34679999
Q ss_pred hHHHHHHHHHHHHhhC--CCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHHH-hCCCCceeEecccCCCCCCc
Q 019795 159 TKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVA-VGRHPELNVYGQDYPTKDGS 235 (335)
Q Consensus 159 sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~~ 235 (335)
||.++|.+++.+..+. .+++++++||++|||+. ..+++.+.... .+..+ +++. ++.
T Consensus 155 sK~~~E~~~~~~~~~~~~~g~~~~~vRpg~v~g~~-------------~~~i~~~~~~~~~g~~~-~~i~-------~~~ 213 (344)
T 2gn4_A 155 TKLCSDKLFVSANNFKGSSQTQFSVVRYGNVVGSR-------------GSVVPFFKKLVQNKASE-IPIT-------DIR 213 (344)
T ss_dssp HHHHHHHHHHHGGGCCCSSCCEEEEECCCEETTCT-------------TSHHHHHHHHHHHTCCC-EEES-------CTT
T ss_pred HHHHHHHHHHHHHHHhCCCCcEEEEEEeccEECCC-------------CCHHHHHHHHHHcCCCc-eEEe-------CCC
Confidence 9999999999887642 37999999999999984 12556554444 44424 5543 467
Q ss_pred eeeeeeeHhhhhc----------cCceEEecCCccccHHHHHHHHHHHhCCCCCceeCCCCCCc-cceeeccHHHHHHhc
Q 019795 236 AVRDYIHVMDLAD----------GCIAYNLGNGKGISVLEMVAAFEKASGKKIPIKFCPRRVGD-ATAVYAATDKAHKEL 304 (335)
Q Consensus 236 ~~~~~v~~~D~~~----------~~~~~nv~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~-~~~~~~d~~k~~~~L 304 (335)
..++|+|++|+++ .+++||+.++ .+|+.|+++.+.+.++ +...+.++.+ .....++..+.++.+
T Consensus 214 ~~r~~i~v~D~a~~v~~~l~~~~~g~~~~~~~~-~~s~~el~~~i~~~~~----~~~~~~~~~e~~~e~~~~~~~~~~~~ 288 (344)
T 2gn4_A 214 MTRFWITLDEGVSFVLKSLKRMHGGEIFVPKIP-SMKMTDLAKALAPNTP----TKIIGIRPGEKLHEVMIPKDESHLAL 288 (344)
T ss_dssp CEEEEECHHHHHHHHHHHHHHCCSSCEEEECCC-EEEHHHHHHHHCTTCC----EEECCCCTTCCSSCEEECGGGGGGEE
T ss_pred eEEeeEEHHHHHHHHHHHHhhccCCCEEecCCC-cEEHHHHHHHHHHhCC----eeEcCCCCCccHhhhccCHhHHHhhc
Confidence 7899999999987 4679998665 6999999999987543 2222222222 123344555565666
Q ss_pred CCcccc
Q 019795 305 GWKPKY 310 (335)
Q Consensus 305 g~~p~~ 310 (335)
+|...+
T Consensus 289 ~~~~~~ 294 (344)
T 2gn4_A 289 EFEDFF 294 (344)
T ss_dssp ECSSEE
T ss_pred cCCCEE
Confidence 665543
|
| >4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-35 Score=274.53 Aligned_cols=300 Identities=17% Similarity=0.171 Sum_probs=212.0
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCch---hhHHhhhhhcC----CccccceeEEEccCCCHHHHH
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVP---EAVDRVKDLAG----PELAKKLEFHVGDLRNKDDLD 74 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~---~~~~~~~~~~~----~~~~~~i~~~~~Dl~d~~~~~ 74 (335)
+.+|+|||||||||||++|+++|++.|++|++++|+..... ...+.+..... .....++.++.+|++|++.+.
T Consensus 67 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~ 146 (427)
T 4f6c_A 67 RPLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV 146 (427)
T ss_dssp CCCEEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CCCC
T ss_pred CCCCEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCcccCC
Confidence 35679999999999999999999999999999999866321 11111111100 001267999999999987777
Q ss_pred HHHhcCCCCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccCC-----CCCCCccCCCC
Q 019795 75 KLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQ-----PEKIPCVEDFP 149 (335)
Q Consensus 75 ~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~-----~~~~~~~e~~~ 149 (335)
.+ .++|+|||+|+.... ..++...+++|+.++.+++++|.+ ++++||++||.++ |. ....+++|+++
T Consensus 147 -~~--~~~d~Vih~A~~~~~---~~~~~~~~~~Nv~g~~~l~~aa~~-~~~~~v~~SS~~~-G~~~~~~~~~~~~~E~~~ 218 (427)
T 4f6c_A 147 -LP--ENMDTIIHAGARTDH---FGDDDEFEKVNVQGTVDVIRLAQQ-HHARLIYVSTISV-GTYFDIDTEDVTFSEADV 218 (427)
T ss_dssp -CS--SCCSEEEECCCCC----------CHHHHHHHHHHHHHHHHHH-TTCEEEEEEEGGG-GSEECSSCSCCEECTTCS
T ss_pred -Cc--CCCCEEEECCcccCC---CCCHHHHHHHHHHHHHHHHHHHHh-cCCcEEEECchHh-CCCccCCCCCcccccccc
Confidence 44 489999999998642 345678899999999999999999 7789999999998 54 23467888876
Q ss_pred ---CCCCChhHHhHHHHHHHHHHHHhhCCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHH-HHHHHHhCCCCceeEe
Q 019795 150 ---YGAMNPYGRTKQWCEEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMP-YIQQVAVGRHPELNVY 225 (335)
Q Consensus 150 ---~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 225 (335)
..+.+.|+.+|..+|.+++.+.+ . +++++++||++|||+.....+.. .....+++ ++.....+. + ++.
T Consensus 219 ~~~~~~~~~Y~~sK~~~E~~~~~~~~-~-g~~~~ivRpg~v~G~~~~~~~~~---~~~~~~~~~~~~~~~~~~-~-~~~- 290 (427)
T 4f6c_A 219 YKGQLLTSPYTRSKFYSELKVLEAVN-N-GLDGRIVRVGNLTSPYNGRWHMR---NIKTNRFSMVMNDLLQLD-C-IGV- 290 (427)
T ss_dssp CSSCCCCSHHHHHHHHHHHHHHHHHH-T-TCCEEEEEECCEESCSSSCCCCT---TGGGCHHHHHHHHHHHSS-E-EEH-
T ss_pred ccCCCCCCchHHHHHHHHHHHHHHHH-c-CCCEEEEeCCeeecCCCCCcccc---CcchHHHHHHHHHHHhcC-C-CCC-
Confidence 45778999999999999998765 4 99999999999999965422211 11122334 444444433 2 332
Q ss_pred cccCCCCCCceeeeeeeHhhhhc----------cCceEEecCCccccHHHHHHHHHHHhCCCCCceeCCCCC--------
Q 019795 226 GQDYPTKDGSAVRDYIHVMDLAD----------GCIAYNLGNGKGISVLEMVAAFEKASGKKIPIKFCPRRV-------- 287 (335)
Q Consensus 226 g~~~~~~~~~~~~~~v~~~D~~~----------~~~~~nv~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~-------- 287 (335)
+ +++..++|+|++|+++ .+++||+++++.+|+.|+++.+.+ ++ .+....+.+.
T Consensus 291 ~------~~~~~~~~v~v~DvA~ai~~~~~~~~~g~~~~l~~~~~~s~~el~~~i~~-~g--~~~~~~~~~~~~l~~~~~ 361 (427)
T 4f6c_A 291 S------MAEMPVDFSFVDTTARQIVALAQVNTPQIIYHVLSPNKMPVKSLLECVKR-KE--IELVSDESFNEILQKQDM 361 (427)
T ss_dssp H------HHTCEECCEEHHHHHHHHHHHTTSCCCCSEEEESCSCCEEHHHHHHHHHS-SC--CEEECHHHHHHHHHHTTC
T ss_pred c------cccceEEEeeHHHHHHHHHHHHcCCCCCCEEEecCCCCCcHHHHHHHHHH-cC--CcccCHHHHHHHHHhcCc
Confidence 2 3578899999999997 478999999999999999999998 56 2221111000
Q ss_pred ----------CccceeeccHHHHH---HhcCCccccCHHHHHHHHHHHHhcC
Q 019795 288 ----------GDATAVYAATDKAH---KELGWKPKYGIEDMCAHQWNWAKNN 326 (335)
Q Consensus 288 ----------~~~~~~~~d~~k~~---~~Lg~~p~~~~~~~~~~~~~~~~~~ 326 (335)
.......+|+++.. +.+||.+....++.++++++++++.
T Consensus 362 ~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~G~~~~~~~~~~l~~~~~~l~~~ 413 (427)
T 4f6c_A 362 YETIGLTSVDREQQLAMIDTTLTLKIMNHISEKWPTITNNWLYHWAQYIKTI 413 (427)
T ss_dssp HHHHHHHHHHHTSEECEECCHHHHHHHHHTTCCCCCCCHHHHHHHHHHHHHH
T ss_pred hhhhhhhhccccCCceeccHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHH
Confidence 01124667877776 5679988855566889988888774
|
| >2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-34 Score=252.01 Aligned_cols=249 Identities=16% Similarity=0.159 Sum_probs=194.5
Q ss_pred CeEEEEcCCChhhHHHHHHHHhC--CCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCC
Q 019795 5 KNILVTGGAGFIGTHCALQLLQG--GFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKF 82 (335)
Q Consensus 5 ~~vlItGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~ 82 (335)
|+|||||||||||++++++|+++ |++|++++|++....... . .++.++.+|++|.+++.++++ ++
T Consensus 1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~----~-------~~~~~~~~D~~d~~~l~~~~~--~~ 67 (287)
T 2jl1_A 1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLA----D-------QGVEVRHGDYNQPESLQKAFA--GV 67 (287)
T ss_dssp CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHH----H-------TTCEEEECCTTCHHHHHHHTT--TC
T ss_pred CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHh----h-------cCCeEEEeccCCHHHHHHHHh--cC
Confidence 57999999999999999999998 999999999765433211 1 467899999999999999998 79
Q ss_pred CEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccCCCCCCCccCCCCCCCCChhHHhHHH
Q 019795 83 EAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQW 162 (335)
Q Consensus 83 d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~Y~~sK~~ 162 (335)
|+|||+|+... . . ++|+.++.+++++|++.++++||++||.++|.. | ..|+.+|..
T Consensus 68 d~vi~~a~~~~-----~---~--~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~~-------------~-~~y~~~K~~ 123 (287)
T 2jl1_A 68 SKLLFISGPHY-----D---N--TLLIVQHANVVKAARDAGVKHIAYTGYAFAEES-------------I-IPLAHVHLA 123 (287)
T ss_dssp SEEEECCCCCS-----C---H--HHHHHHHHHHHHHHHHTTCSEEEEEEETTGGGC-------------C-STHHHHHHH
T ss_pred CEEEEcCCCCc-----C---c--hHHHHHHHHHHHHHHHcCCCEEEEECCCCCCCC-------------C-CchHHHHHH
Confidence 99999998631 1 1 579999999999999999999999999887621 1 379999999
Q ss_pred HHHHHHHHHhhCCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHHHhCCCCceeEecccCCCCCCceeeeeee
Q 019795 163 CEEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAVRDYIH 242 (335)
Q Consensus 163 ~E~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~v~ 242 (335)
+|++++. . +++++++||+.++|+.. . .++......+. +. .+ .++..++|+|
T Consensus 124 ~E~~~~~----~-~~~~~ilrp~~~~~~~~-----------~----~~~~~~~~~~~--~~-~~------~~~~~~~~i~ 174 (287)
T 2jl1_A 124 TEYAIRT----T-NIPYTFLRNALYTDFFV-----------N----EGLRASTESGA--IV-TN------AGSGIVNSVT 174 (287)
T ss_dssp HHHHHHH----T-TCCEEEEEECCBHHHHS-----------S----GGGHHHHHHTE--EE-ES------CTTCCBCCBC
T ss_pred HHHHHHH----c-CCCeEEEECCEeccccc-----------h----hhHHHHhhCCc--ee-cc------CCCCccCccC
Confidence 9999864 3 89999999998877520 1 11222222222 22 33 4567789999
Q ss_pred Hhhhhc-----------cCceEEecCCccccHHHHHHHHHHHhCCCCCceeCCCC-----------CCcc----------
Q 019795 243 VMDLAD-----------GCIAYNLGNGKGISVLEMVAAFEKASGKKIPIKFCPRR-----------VGDA---------- 290 (335)
Q Consensus 243 ~~D~~~-----------~~~~~nv~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~-----------~~~~---------- 290 (335)
++|+++ .+++||+++++.+|+.|+++.+.+.+|.+.++...+.. +...
T Consensus 175 ~~Dva~~~~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (287)
T 2jl1_A 175 RNELALAAATVLTEEGHENKTYNLVSNQPWTFDELAQILSEVSGKKVVHQPVSFEEEKNFLVNAGVPEPFTEITAAIYDA 254 (287)
T ss_dssp HHHHHHHHHHHHTSSSCTTEEEEECCSSCBCHHHHHHHHHHHHSSCCEEEECCHHHHHHHHHHTTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCCCcEEEecCCCcCCHHHHHHHHHHHHCCcceEEeCCHHHHHHHHHhCCCCHHHHHHHHHHHHH
Confidence 999987 36799999999999999999999999988766555421 1000
Q ss_pred ---ceeeccHHHHHHhcCCccccCHHHHHHHHHH
Q 019795 291 ---TAVYAATDKAHKELGWKPKYGIEDMCAHQWN 321 (335)
Q Consensus 291 ---~~~~~d~~k~~~~Lg~~p~~~~~~~~~~~~~ 321 (335)
.....|++|+++.|| |.++++++++++++
T Consensus 255 ~~~~~~~~~~~~~~~~lG--~~~~l~e~l~~~~~ 286 (287)
T 2jl1_A 255 ISKGEASKTSDDLQKLIG--SLTPLKETVKQALK 286 (287)
T ss_dssp HHTTTTCCCCSHHHHHHS--SCCCHHHHHHHHHT
T ss_pred HhCCCCcCCchHHHHHhC--CCCCHHHHHHHHhc
Confidence 234568899999999 66699999999875
|
| >2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-34 Score=252.44 Aligned_cols=249 Identities=14% Similarity=0.127 Sum_probs=189.0
Q ss_pred eEEEEcCCChhhHHHHHHHHhC--CCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCCC
Q 019795 6 NILVTGGAGFIGTHCALQLLQG--GFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKFE 83 (335)
Q Consensus 6 ~vlItGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~d 83 (335)
+|||||||||||++++++|+++ |++|++++|++........ .++.++.+|++|.+++.++++ ++|
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~-----------~~~~~~~~D~~d~~~~~~~~~--~~d 67 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAA-----------QGITVRQADYGDEAALTSALQ--GVE 67 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHHH-----------TTCEEEECCTTCHHHHHHHTT--TCS
T ss_pred CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhhc-----------CCCeEEEcCCCCHHHHHHHHh--CCC
Confidence 5899999999999999999998 9999999997655432211 467899999999999999998 789
Q ss_pred EEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccCCCCCCCccCCCCCCCCChhHHhHHHH
Q 019795 84 AVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQWC 163 (335)
Q Consensus 84 ~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~Y~~sK~~~ 163 (335)
+|||+|+... ..|+.++.+++++|++.+++++|++||.++|. ....|+.+|..+
T Consensus 68 ~vi~~a~~~~------------~~~~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~--------------~~~~y~~sK~~~ 121 (286)
T 2zcu_A 68 KLLLISSSEV------------GQRAPQHRNVINAAKAAGVKFIAYTSLLHADT--------------SPLGLADEHIET 121 (286)
T ss_dssp EEEECC--------------------CHHHHHHHHHHHHTCCEEEEEEETTTTT--------------CCSTTHHHHHHH
T ss_pred EEEEeCCCCc------------hHHHHHHHHHHHHHHHcCCCEEEEECCCCCCC--------------CcchhHHHHHHH
Confidence 9999998621 14788999999999999999999999988761 113799999999
Q ss_pred HHHHHHHHhhCCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHHHhCCCCceeEecccCCCCCCceeeeeeeH
Q 019795 164 EEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAVRDYIHV 243 (335)
Q Consensus 164 E~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~v~~ 243 (335)
|++++. . +++++++||+.++++. ..++.....++. +. .+ +++..++|+|+
T Consensus 122 e~~~~~----~-~~~~~ilrp~~~~~~~----------------~~~~~~~~~~~~--~~-~~------~~~~~~~~i~~ 171 (286)
T 2zcu_A 122 EKMLAD----S-GIVYTLLRNGWYSENY----------------LASAPAALEHGV--FI-GA------AGDGKIASATR 171 (286)
T ss_dssp HHHHHH----H-CSEEEEEEECCBHHHH----------------HTTHHHHHHHTE--EE-ES------CTTCCBCCBCH
T ss_pred HHHHHH----c-CCCeEEEeChHHhhhh----------------HHHhHHhhcCCc--ee-cc------CCCCccccccH
Confidence 999875 2 8999999997765541 112223333322 33 33 56778999999
Q ss_pred hhhhc-----------cCceEEecCCccccHHHHHHHHHHHhCCCCCceeCCCCC--------Ccc--------------
Q 019795 244 MDLAD-----------GCIAYNLGNGKGISVLEMVAAFEKASGKKIPIKFCPRRV--------GDA-------------- 290 (335)
Q Consensus 244 ~D~~~-----------~~~~~nv~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~--------~~~-------------- 290 (335)
+|+++ .+++||+++++.+|+.|+++.+.+.+|.+.++...+... ..+
T Consensus 172 ~Dva~~~~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (286)
T 2zcu_A 172 ADYAAAAARVISEAGHEGKVYELAGDSAWTLTQLAAELTKQSGKQVTYQNLSEADFAAALKSVGLPDGLADMLADSDVGA 251 (286)
T ss_dssp HHHHHHHHHHHHSSSCTTCEEEECCSSCBCHHHHHHHHHHHHSSCCEEEECCHHHHHHHHTTSSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCCCceEEEeCCCcCCHHHHHHHHHHHHCCCCceeeCCHHHHHHHHHHcCCCHHHHHHHHHHHHHH
Confidence 99987 367999999989999999999999999887665544311 000
Q ss_pred --ceeeccHHHHHHhcCCccccCHHHHHHHHHHHHh
Q 019795 291 --TAVYAATDKAHKELGWKPKYGIEDMCAHQWNWAK 324 (335)
Q Consensus 291 --~~~~~d~~k~~~~Lg~~p~~~~~~~~~~~~~~~~ 324 (335)
.....|++|+++.|||+|+ +++++++++++|+.
T Consensus 252 ~~~~~~~~~~~~~~~lg~~~~-~~~e~l~~~~~~~~ 286 (286)
T 2zcu_A 252 SKGGLFDDSKTLSKLIGHPTT-TLAESVSHLFNVNN 286 (286)
T ss_dssp HTTTTCCCCCHHHHHHTSCCC-CHHHHHHGGGC---
T ss_pred hCCCCccCchHHHHHhCcCCC-CHHHHHHHHHhhcC
Confidence 1255688999999998555 99999999998863
|
| >4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.6e-34 Score=267.50 Aligned_cols=263 Identities=20% Similarity=0.246 Sum_probs=196.3
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhC---CCeEEEEecCCCCchhhHHhhhhhcCC-----------ccccceeEEEccC
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQG---GFKVVLIDNLHNSVPEAVDRVKDLAGP-----------ELAKKLEFHVGDL 67 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~---g~~V~~~~r~~~~~~~~~~~~~~~~~~-----------~~~~~i~~~~~Dl 67 (335)
.++|+|||||||||||++|+++|++. |++|++++|+.... ....++.+.... ....++.++.+|+
T Consensus 71 ~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl 149 (478)
T 4dqv_A 71 PELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDE-DARRRLEKTFDSGDPELLRHFKELAADRLEVVAGDK 149 (478)
T ss_dssp SCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHH-HHHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEECCT
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcH-HHHHHHHHHHHhcchhhhhhhhhhccCceEEEEeEC
Confidence 35789999999999999999999998 89999999976543 223333322211 0125799999999
Q ss_pred C------CHHHHHHHHhcCCCCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccCCCCC
Q 019795 68 R------NKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQPEK 141 (335)
Q Consensus 68 ~------d~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~ 141 (335)
+ |.+.+.++++ ++|+|||+|+.... ..+...+++|+.++.+++++|++.++++|||+||.++|+....
T Consensus 150 ~~~~~gld~~~~~~~~~--~~D~Vih~Aa~~~~----~~~~~~~~~Nv~gt~~ll~aa~~~~~~~~V~iSS~~v~~~~~~ 223 (478)
T 4dqv_A 150 SEPDLGLDQPMWRRLAE--TVDLIVDSAAMVNA----FPYHELFGPNVAGTAELIRIALTTKLKPFTYVSTADVGAAIEP 223 (478)
T ss_dssp TSGGGGCCHHHHHHHHH--HCCEEEECCSSCSB----SSCCEEHHHHHHHHHHHHHHHTSSSCCCEEEEEEGGGGTTSCT
T ss_pred CCcccCCCHHHHHHHHc--CCCEEEECccccCC----cCHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeehhhcCccCC
Confidence 8 6778999998 89999999998643 4555789999999999999999999999999999999998777
Q ss_pred CCccCCCCCCCCC-----------hhHHhHHHHHHHHHHHHhhCCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHH-
Q 019795 142 IPCVEDFPYGAMN-----------PYGRTKQWCEEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMP- 209 (335)
Q Consensus 142 ~~~~e~~~~~~~~-----------~Y~~sK~~~E~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~- 209 (335)
.+++|+.+..|.+ .|+.||..+|++++.+.++. +++++++||++|||+.... | ... ...++.
T Consensus 224 ~~~~E~~~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-gi~~~ivRpg~v~G~~~~~--g--~~~-~~~~~~~ 297 (478)
T 4dqv_A 224 SAFTEDADIRVISPTRTVDGGWAGGYGTSKWAGEVLLREANDLC-ALPVAVFRCGMILADTSYA--G--QLN-MSDWVTR 297 (478)
T ss_dssp TTCCSSSCHHHHCCEEECCTTSEECHHHHHHHHHHHHHHHHHHH-CCCEEEEEECEEECCSSSS--S--CCC-TTBHHHH
T ss_pred CCcCCcccccccCcccccccccccchHHHHHHHHHHHHHHHHHh-CCCeEEEECceeeCCCccC--C--cCC-HHHHHHH
Confidence 7888887655443 39999999999999998876 9999999999999985311 1 011 122333
Q ss_pred HHHHHHh-CCCCceeEecccCCCCCCceeeeeeeHhhhhc---------------cCceEEecCCcc--ccHHHHHHHHH
Q 019795 210 YIQQVAV-GRHPELNVYGQDYPTKDGSAVRDYIHVMDLAD---------------GCIAYNLGNGKG--ISVLEMVAAFE 271 (335)
Q Consensus 210 ~~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~v~~~D~~~---------------~~~~~nv~~~~~--~s~~el~~~i~ 271 (335)
++..... |..| ..+.+....-..+...++|+|++|+++ .+++||+++++. +|+.|+++.+.
T Consensus 298 l~~~~~~~g~~P-~~~~~~~~~G~~~~~~~~~v~vdDvA~ai~~~~~~~~~~~~~~~~~ynv~~~~~~~~s~~el~~~l~ 376 (478)
T 4dqv_A 298 MVLSLMATGIAP-RSFYEPDSEGNRQRAHFDGLPVTFVAEAIAVLGARVAGSSLAGFATYHVMNPHDDGIGLDEYVDWLI 376 (478)
T ss_dssp HHHHHHHHCEEE-SCSBCCCTTSCCCCCCCCEEEHHHHHHHHHHHHHTTC-CCCCSEEEEEESCCCCSSCSHHHHHHHHH
T ss_pred HHHHHHHcCccc-ccccccccccccccceeeeeeHHHHHHHHHHHHhhcccCCCCCCceEEecCCCCCCcCHHHHHHHHH
Confidence 3333332 2211 111110000001267899999999987 256999999988 99999999999
Q ss_pred HHhCCCCC
Q 019795 272 KASGKKIP 279 (335)
Q Consensus 272 ~~~g~~~~ 279 (335)
+. |.+.+
T Consensus 377 ~~-g~~~~ 383 (478)
T 4dqv_A 377 EA-GYPIR 383 (478)
T ss_dssp HT-TCSCE
T ss_pred Hc-CCCcc
Confidence 95 76653
|
| >3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-34 Score=249.91 Aligned_cols=225 Identities=23% Similarity=0.292 Sum_probs=185.6
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCCC
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKFE 83 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~d 83 (335)
||+|||||||||||++|+++|+++|++|++++|++.... ..++.++.+|++|.+++.++++ ++|
T Consensus 2 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~--------------~~~~~~~~~Dl~d~~~~~~~~~--~~d 65 (267)
T 3ay3_A 2 LNRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAA--------------EAHEEIVACDLADAQAVHDLVK--DCD 65 (267)
T ss_dssp EEEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCCC--------------CTTEEECCCCTTCHHHHHHHHT--TCS
T ss_pred CceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCcccc--------------CCCccEEEccCCCHHHHHHHHc--CCC
Confidence 679999999999999999999999999999999765321 0356889999999999999998 799
Q ss_pred EEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccCCC-CCCCccCCCCCCCCChhHHhHHH
Q 019795 84 AVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQP-EKIPCVEDFPYGAMNPYGRTKQW 162 (335)
Q Consensus 84 ~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~-~~~~~~e~~~~~~~~~Y~~sK~~ 162 (335)
+|||+|+.. ....++..+++|+.++.++++++++.++++||++||..+|+.. ...+++|+.+..|.+.|+.+|..
T Consensus 66 ~vi~~a~~~----~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~ 141 (267)
T 3ay3_A 66 GIIHLGGVS----VERPWNDILQANIIGAYNLYEAARNLGKPRIVFASSNHTIGYYPRTTRIDTEVPRRPDSLYGLSKCF 141 (267)
T ss_dssp EEEECCSCC----SCCCHHHHHHHTHHHHHHHHHHHHHTTCCEEEEEEEGGGSTTSBTTSCBCTTSCCCCCSHHHHHHHH
T ss_pred EEEECCcCC----CCCCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCHHHhCCCCCCCCCCCCCCCCCCChHHHHHHH
Confidence 999999975 2445678899999999999999999888999999999999874 35689999999999999999999
Q ss_pred HHHHHHHHHhhCCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHHHhCCCCceeEecccCCCCCCceeeeeee
Q 019795 163 CEEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAVRDYIH 242 (335)
Q Consensus 163 ~E~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~v~ 242 (335)
+|.+++.+..+. +++++++||+++|+. +. ++...++|+|
T Consensus 142 ~e~~~~~~~~~~-gi~~~~lrp~~v~~~-------------~~---------------------------~~~~~~~~~~ 180 (267)
T 3ay3_A 142 GEDLASLYYHKF-DIETLNIRIGSCFPK-------------PK---------------------------DARMMATWLS 180 (267)
T ss_dssp HHHHHHHHHHTT-CCCEEEEEECBCSSS-------------CC---------------------------SHHHHHHBCC
T ss_pred HHHHHHHHHHHc-CCCEEEEeceeecCC-------------CC---------------------------CCCeeecccc
Confidence 999999887766 999999999999842 00 1233467899
Q ss_pred Hhhhhc-----------cCceEEecCCccccHHHHHHHHHHHhCCCCCceeCCCCCCccceeeccHHHHHHhcCCccccC
Q 019795 243 VMDLAD-----------GCIAYNLGNGKGISVLEMVAAFEKASGKKIPIKFCPRRVGDATAVYAATDKAHKELGWKPKYG 311 (335)
Q Consensus 243 ~~D~~~-----------~~~~~nv~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~d~~k~~~~Lg~~p~~~ 311 (335)
++|+++ ..++||+.++. .....|..++ +.|||+|+++
T Consensus 181 ~~dva~~~~~~~~~~~~~~~~~~~~~~~-------------------------------~~~~~d~~~~-~~lg~~p~~~ 228 (267)
T 3ay3_A 181 VDDFMRLMKRAFVAPKLGCTVVYGASAN-------------------------------TESWWDNDKS-AFLGWVPQDS 228 (267)
T ss_dssp HHHHHHHHHHHHHSSCCCEEEEEECCSC-------------------------------SSCCBCCGGG-GGGCCCCCCC
T ss_pred HHHHHHHHHHHHhCCCCCceeEecCCCc-------------------------------cccccCHHHH-HHcCCCCCCC
Confidence 999886 12445543321 2245678888 8999999999
Q ss_pred HHHHHHHHHH
Q 019795 312 IEDMCAHQWN 321 (335)
Q Consensus 312 ~~~~~~~~~~ 321 (335)
++++++++.+
T Consensus 229 ~~~~~~~~~~ 238 (267)
T 3ay3_A 229 SEIWREEIEQ 238 (267)
T ss_dssp GGGGHHHHHH
T ss_pred HHHHHHHHHh
Confidence 9999998865
|
| >4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-34 Score=273.77 Aligned_cols=300 Identities=17% Similarity=0.162 Sum_probs=213.1
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhh---HHhhhhhc----CCccccceeEEEccCCCHHHHHH
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEA---VDRVKDLA----GPELAKKLEFHVGDLRNKDDLDK 75 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---~~~~~~~~----~~~~~~~i~~~~~Dl~d~~~~~~ 75 (335)
.+|+|||||||||||++|+++|.+.|++|++++|+....... .+.+.... ......++.++.+|+++.+.+.
T Consensus 149 ~~~~VLVTGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~- 227 (508)
T 4f6l_B 149 PLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV- 227 (508)
T ss_dssp CCEEEEESCTTSHHHHHHHHHTBTTEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSCC-
T ss_pred CCCeEEEECCccchHHHHHHHHHhcCCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccccCC-
Confidence 468999999999999999999988899999999976632111 11111110 0011268999999999977777
Q ss_pred HHhcCCCCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccCC-----CCCCCccCCCC-
Q 019795 76 LFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQ-----PEKIPCVEDFP- 149 (335)
Q Consensus 76 ~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~-----~~~~~~~e~~~- 149 (335)
+.. ++|+|||+|+.... ...+...+++|+.++.+++++|++ +.+++||+||.++ |. ....+++|+++
T Consensus 228 ~~~--~~D~Vih~Aa~~~~---~~~~~~~~~~Nv~gt~~ll~~a~~-~~~~~v~iSS~~v-G~~~~~~~~~~~~~E~~~~ 300 (508)
T 4f6l_B 228 LPE--NMDTIIHAGARTDH---FGDDDEFEKVNVQGTVDVIRLAQQ-HHARLIYVSTISV-GTYFDIDTEDVTFSEADVY 300 (508)
T ss_dssp CSS--CCSEEEECCCC-----------CCHHHHHHHHHHHHHHHHT-TTCEEEEEEESCT-TSEECTTCSCCEECTTCSC
T ss_pred Ccc--CCCEEEECCceecC---CCCHHHHhhhHHHHHHHHHHHHHh-CCCcEEEeCChhh-ccCCccCCcCccccccccc
Confidence 443 89999999998532 345567889999999999999998 6789999999998 43 23457888876
Q ss_pred --CCCCChhHHhHHHHHHHHHHHHhhCCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHHHhCCCCceeEecc
Q 019795 150 --YGAMNPYGRTKQWCEEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQ 227 (335)
Q Consensus 150 --~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 227 (335)
..+.+.|+.+|..+|++++.+.+ . +++++++||++|||+.....+.. .....+++.+......... ++. +
T Consensus 301 ~~~~~~~~Y~~sK~~~E~~~~~~~~-~-gi~~~ilRp~~v~G~~~~~~~~~---~~~~~~~~~~i~~~~~~~~-~~~-~- 372 (508)
T 4f6l_B 301 KGQLLTSPYTRSKFYSELKVLEAVN-N-GLDGRIVRVGNLTSPYNGRWHMR---NIKTNRFSMVMNDLLQLDC-IGV-S- 372 (508)
T ss_dssp SSBCCCSHHHHHHHHHHHHHHHHHH-T-TCEEEEEEECCEESCSSSCCCCT---TCTTCHHHHHHHHHTTCSE-EET-T-
T ss_pred ccccCCCcHHHHHHHHHHHHHHHHH-c-CCCEEEEecceeccCCCCCcccC---CcchHHHHHHHHHHHHcCC-CCC-C-
Confidence 34678999999999999998765 4 99999999999999965432211 1122334444333333222 322 2
Q ss_pred cCCCCCCceeeeeeeHhhhhc----------cCceEEecCCccccHHHHHHHHHHHhCCCCCceeCCCC-----------
Q 019795 228 DYPTKDGSAVRDYIHVMDLAD----------GCIAYNLGNGKGISVLEMVAAFEKASGKKIPIKFCPRR----------- 286 (335)
Q Consensus 228 ~~~~~~~~~~~~~v~~~D~~~----------~~~~~nv~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~----------- 286 (335)
+++..++|+|++|+++ .+++||+++++.+|+.|+++.+.+.. .+....+.+
T Consensus 373 -----~g~~~~~~v~v~DvA~ai~~~~~~~~~~~~~nl~~~~~~s~~el~~~i~~~~---~~~~~~~~w~~~l~~~~~~~ 444 (508)
T 4f6l_B 373 -----MAEMPVDFSFVDTTARQIVALAQVNTPQIIYHVLSPNKMPVKSLLECVKRKE---IELVSDESFNEILQKQDMYE 444 (508)
T ss_dssp -----GGGSEEECEEHHHHHHHHHHHTTBCCSCSEEEESCSCEEEHHHHHHHHHSSC---CEEECHHHHHHHHHTTCCHH
T ss_pred -----ccCceEEEEcHHHHHHHHHHHHhCCCCCCEEEeCCCCCCCHHHHHHHHHHcC---CcccCHHHHHHHHHhcCCcc
Confidence 4678899999999987 47899999999999999999999754 211111100
Q ss_pred -------CCccceeeccHHHHH---HhcCCccccCHHHHHHHHHHHHhcC
Q 019795 287 -------VGDATAVYAATDKAH---KELGWKPKYGIEDMCAHQWNWAKNN 326 (335)
Q Consensus 287 -------~~~~~~~~~d~~k~~---~~Lg~~p~~~~~~~~~~~~~~~~~~ 326 (335)
........+|+++.. +.+||.+....++.++++++|+++.
T Consensus 445 ~~~~~~~~~~~~~~~~d~~~~~~~l~~~G~~~~~~~~~~l~~~~~~~~~~ 494 (508)
T 4f6l_B 445 TIGLTSVDREQQLAMIDTTLTLKIMNHISEKWPTITNNWLYHWAQYIKTI 494 (508)
T ss_dssp HHHHHHTGGGSEECEECCHHHHHHHHHHSCCCCCCCHHHHHHHHHHHHHH
T ss_pred chhcccccccCcceecchHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHH
Confidence 011135667777765 5679988876688899998888874
|
| >3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-33 Score=241.19 Aligned_cols=215 Identities=15% Similarity=0.118 Sum_probs=167.5
Q ss_pred CCCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcC
Q 019795 1 MASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQ 80 (335)
Q Consensus 1 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~ 80 (335)
|.+||+|||||||||||++++++|+++|++|++++|++...... ..++.++.+|++|.+++.++++
T Consensus 1 M~~m~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~------------~~~~~~~~~Dl~d~~~~~~~~~-- 66 (227)
T 3dhn_A 1 MEKVKKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIE------------NEHLKVKKADVSSLDEVCEVCK-- 66 (227)
T ss_dssp --CCCEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCC------------CTTEEEECCCTTCHHHHHHHHT--
T ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhc------------cCceEEEEecCCCHHHHHHHhc--
Confidence 67789999999999999999999999999999999975443211 1578999999999999999998
Q ss_pred CCCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccCCCCCCCccCCCCCCCCChhHHhH
Q 019795 81 KFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTK 160 (335)
Q Consensus 81 ~~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~Y~~sK 160 (335)
++|+|||+|+.... ....+++|+.++.+++++|++.+++++|++||.++|+.... ...|+.+..|.+.|+.+|
T Consensus 67 ~~d~vi~~a~~~~~------~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~-~~~~~~~~~p~~~Y~~sK 139 (227)
T 3dhn_A 67 GADAVISAFNPGWN------NPDIYDETIKVYLTIIDGVKKAGVNRFLMVGGAGSLFIAPG-LRLMDSGEVPENILPGVK 139 (227)
T ss_dssp TCSEEEECCCC------------CCSHHHHHHHHHHHHHHHTTCSEEEEECCSTTSEEETT-EEGGGTTCSCGGGHHHHH
T ss_pred CCCEEEEeCcCCCC------ChhHHHHHHHHHHHHHHHHHHhCCCEEEEeCChhhccCCCC-CccccCCcchHHHHHHHH
Confidence 79999999987421 12378899999999999999999999999999887754432 345667778888999999
Q ss_pred HHHHHHHHHHHhhCCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHHHhCCCCceeEecccCCCCCCceeeee
Q 019795 161 QWCEEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAVRDY 240 (335)
Q Consensus 161 ~~~E~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 240 (335)
..+|.+++.+.++. +++++++||+++||+.... ..+. .+... .+. .+.. ++|
T Consensus 140 ~~~e~~~~~~~~~~-~~~~~ilrp~~v~g~~~~~----------~~~~-------~~~~~--~~~-------~~~~-~~~ 191 (227)
T 3dhn_A 140 ALGEFYLNFLMKEK-EIDWVFFSPAADMRPGVRT----------GRYR-------LGKDD--MIV-------DIVG-NSH 191 (227)
T ss_dssp HHHHHHHHTGGGCC-SSEEEEEECCSEEESCCCC----------CCCE-------EESSB--CCC-------CTTS-CCE
T ss_pred HHHHHHHHHHhhcc-CccEEEEeCCcccCCCccc----------ccee-------ecCCC--ccc-------CCCC-CcE
Confidence 99999988887666 9999999999999985321 0010 12211 111 1222 899
Q ss_pred eeHhhhhc-----------cCceEEecCCccccHH
Q 019795 241 IHVMDLAD-----------GCIAYNLGNGKGISVL 264 (335)
Q Consensus 241 v~~~D~~~-----------~~~~~nv~~~~~~s~~ 264 (335)
+|++|+++ .+++|+++++++.++.
T Consensus 192 i~~~Dva~ai~~~l~~~~~~g~~~~~~~~~~~~~~ 226 (227)
T 3dhn_A 192 ISVEDYAAAMIDELEHPKHHQERFTIGYLEHHHHH 226 (227)
T ss_dssp EEHHHHHHHHHHHHHSCCCCSEEEEEECCSCCC--
T ss_pred EeHHHHHHHHHHHHhCccccCcEEEEEeehhcccC
Confidence 99999998 5889999999998875
|
| >3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-32 Score=241.13 Aligned_cols=168 Identities=22% Similarity=0.226 Sum_probs=151.0
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCC
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQK 81 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~ 81 (335)
|+||+|||||||||||++|++.|+++|++|++++|++.... ..++.++.+|++|.+++.++++ +
T Consensus 1 m~~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~--------------~~~~~~~~~Dl~d~~~~~~~~~--~ 64 (267)
T 3rft_A 1 MAMKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPA--------------GPNEECVQCDLADANAVNAMVA--G 64 (267)
T ss_dssp CCEEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC--------------CTTEEEEECCTTCHHHHHHHHT--T
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc--------------CCCCEEEEcCCCCHHHHHHHHc--C
Confidence 45789999999999999999999999999999999865432 1578999999999999999998 8
Q ss_pred CCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccCCC-CCCCccCCCCCCCCChhHHhH
Q 019795 82 FEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQP-EKIPCVEDFPYGAMNPYGRTK 160 (335)
Q Consensus 82 ~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~-~~~~~~e~~~~~~~~~Y~~sK 160 (335)
+|+|||+|+.. ....++.++++|+.++.++++++++.+.++||++||.++||.. ...+++|+.+..|.+.|+.||
T Consensus 65 ~D~vi~~Ag~~----~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~~~g~~~~~~~~~e~~~~~~~~~Y~~sK 140 (267)
T 3rft_A 65 CDGIVHLGGIS----VEKPFEQILQGNIIGLYNLYEAARAHGQPRIVFASSNHTIGYYPQTERLGPDVPARPDGLYGVSK 140 (267)
T ss_dssp CSEEEECCSCC----SCCCHHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGTTSBTTSCBCTTSCCCCCSHHHHHH
T ss_pred CCEEEECCCCc----CcCCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcchHHhCCCCCCCCCCCCCCCCCCChHHHHH
Confidence 99999999983 3556788999999999999999999988999999999999754 456789999999999999999
Q ss_pred HHHHHHHHHHHhhCCCCeEEEEecccccCC
Q 019795 161 QWCEEIAFDVQKADPEWRIILLRYFNPVGA 190 (335)
Q Consensus 161 ~~~E~~~~~~~~~~~~~~~~~lR~~~v~G~ 190 (335)
..+|.+++.++.++ +++++++||+.|||+
T Consensus 141 ~~~e~~~~~~a~~~-g~~~~~vr~~~v~~~ 169 (267)
T 3rft_A 141 CFGENLARMYFDKF-GQETALVRIGSCTPE 169 (267)
T ss_dssp HHHHHHHHHHHHHH-CCCEEEEEECBCSSS
T ss_pred HHHHHHHHHHHHHh-CCeEEEEEeecccCC
Confidence 99999999988887 999999999999986
|
| >3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-32 Score=246.78 Aligned_cols=274 Identities=14% Similarity=0.165 Sum_probs=198.1
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCC
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQK 81 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~ 81 (335)
|++|+|||||||||||++|++.|++.|++|++++|+..........+..... .++.++.+|++|.+++.++++..+
T Consensus 8 M~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~~----~~v~~~~~Dl~d~~~l~~~~~~~~ 83 (346)
T 3i6i_A 8 SPKGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALED----KGAIIVYGLINEQEAMEKILKEHE 83 (346)
T ss_dssp ---CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHHH----TTCEEEECCTTCHHHHHHHHHHTT
T ss_pred CCCCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHHh----CCcEEEEeecCCHHHHHHHHhhCC
Confidence 3457999999999999999999999999999999987544433333322221 678999999999999999998778
Q ss_pred CCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcC-CCEEEEeccccccCCCCCCCccCCCCCCCCChhHHhH
Q 019795 82 FEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYN-CKKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTK 160 (335)
Q Consensus 82 ~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~Y~~sK 160 (335)
+|+|||+|+.. |+.++.+++++|++.+ +++||+ | +||. ..+|+.+..|.+.|+.+|
T Consensus 84 ~d~Vi~~a~~~---------------n~~~~~~l~~aa~~~g~v~~~v~-S---~~g~----~~~e~~~~~p~~~y~~sK 140 (346)
T 3i6i_A 84 IDIVVSTVGGE---------------SILDQIALVKAMKAVGTIKRFLP-S---EFGH----DVNRADPVEPGLNMYREK 140 (346)
T ss_dssp CCEEEECCCGG---------------GGGGHHHHHHHHHHHCCCSEEEC-S---CCSS----CTTTCCCCTTHHHHHHHH
T ss_pred CCEEEECCchh---------------hHHHHHHHHHHHHHcCCceEEee-c---ccCC----CCCccCcCCCcchHHHHH
Confidence 99999999872 8888999999999998 999986 3 4543 345666777888999999
Q ss_pred HHHHHHHHHHHhhCCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHHHhCCCCceeEecccCCCCCCceeeee
Q 019795 161 QWCEEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAVRDY 240 (335)
Q Consensus 161 ~~~E~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 240 (335)
..+|++++. . +++++++||+.+||...... ..+. .. ...... +.++| +++..++|
T Consensus 141 ~~~e~~l~~----~-g~~~tivrpg~~~g~~~~~~-----------~~~~-~~-~~~~~~-~~~~g------~g~~~~~~ 195 (346)
T 3i6i_A 141 RRVRQLVEE----S-GIPFTYICCNSIASWPYYNN-----------IHPS-EV-LPPTDF-FQIYG------DGNVKAYF 195 (346)
T ss_dssp HHHHHHHHH----T-TCCBEEEECCEESSCCCSCC-----------------C-CCCSSC-EEEET------TSCCCEEE
T ss_pred HHHHHHHHH----c-CCCEEEEEecccccccCccc-----------cccc-cc-cCCCce-EEEcc------CCCceEEe
Confidence 999999875 3 89999999999999632211 1011 00 011222 67788 78899999
Q ss_pred eeHhhhhc-----------cCceEEecC-CccccHHHHHHHHHHHhCCCCCceeCCCCCC--------cc----------
Q 019795 241 IHVMDLAD-----------GCIAYNLGN-GKGISVLEMVAAFEKASGKKIPIKFCPRRVG--------DA---------- 290 (335)
Q Consensus 241 v~~~D~~~-----------~~~~~nv~~-~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~--------~~---------- 290 (335)
+|++|+++ .+++||+++ ++.+|+.|+++.+.+.+|.+.++...+.... .+
T Consensus 196 i~~~Dva~~~~~~l~~~~~~~~~~~i~g~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 275 (346)
T 3i6i_A 196 VAGTDIGKFTMKTVDDVRTLNKSVHFRPSCNCLNINELASVWEKKIGRTLPRVTVTEDDLLAAAGENIIPQSVVAAFTHD 275 (346)
T ss_dssp ECHHHHHHHHHHHTTCGGGTTEEEECCCGGGEECHHHHHHHHHHHHTSCCCEEEECHHHHHHHHHTCCTTHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHhCccccCeEEEEeCCCCCCCHHHHHHHHHHHHCCCCceEecCHHHHHHHHhcCCChhhhHHHHHHH
Confidence 99999997 377899975 5899999999999999998877655442100 00
Q ss_pred -----ceeeccH-----HHHHH-hcCCccccCHHHHHHHHHHHHhcCCC
Q 019795 291 -----TAVYAAT-----DKAHK-ELGWKPKYGIEDMCAHQWNWAKNNPM 328 (335)
Q Consensus 291 -----~~~~~d~-----~k~~~-~Lg~~p~~~~~~~~~~~~~~~~~~~~ 328 (335)
....++. .++++ .-+++|+ ++++.++++++|++++..
T Consensus 276 ~~~~g~~~~~~~~~~~~~~~~~~~p~~~~t-~~~e~l~~~~~~~~~~~~ 323 (346)
T 3i6i_A 276 IFIKGCQVNFSIDGPEDVEVTTLYPEDSFR-TVEECFGEYIVKMEEKQP 323 (346)
T ss_dssp HHTTCTTTSSCCCSTTEEEHHHHSTTCCCC-CHHHHHHHHHCC------
T ss_pred HhccCCCcccccCCCCcccHHHhCCCCCcC-cHHHHHHHHHHHhhcccc
Confidence 0001111 11222 3456776 899999999999998754
|
| >3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A | Back alignment and structure |
|---|
Probab=99.98 E-value=3.5e-32 Score=248.84 Aligned_cols=239 Identities=16% Similarity=0.174 Sum_probs=187.1
Q ss_pred CeEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCCC
Q 019795 5 KNILVTGGAGFIGTHCALQLLQGGF-KVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKFE 83 (335)
Q Consensus 5 ~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~d 83 (335)
|+|||||||||||++|+++|+++|+ +|++++|+ .|.+++.++++ ++|
T Consensus 1 M~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~~------------------------------~d~~~l~~~~~--~~d 48 (369)
T 3st7_A 1 MNIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQ------------------------------TKEEELESALL--KAD 48 (369)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCCCEEEECCTT------------------------------CCHHHHHHHHH--HCS
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCEEEEECCC------------------------------CCHHHHHHHhc--cCC
Confidence 5899999999999999999999998 77776552 57788899998 799
Q ss_pred EEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCC-EEEEeccccccCCCCCCCccCCCCCCCCChhHHhHHH
Q 019795 84 AVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCK-KLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQW 162 (335)
Q Consensus 84 ~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~-~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~Y~~sK~~ 162 (335)
+|||+|+.... +++...+++|+.++.+++++|++.+++ ++|++||..+|+ .+.|+.+|..
T Consensus 49 ~Vih~a~~~~~----~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~Ss~~~~~---------------~~~Y~~sK~~ 109 (369)
T 3st7_A 49 FIVHLAGVNRP----EHDKEFSLGNVSYLDHVLDILTRNTKKPAILLSSSIQATQ---------------DNPYGESKLQ 109 (369)
T ss_dssp EEEECCCSBCT----TCSTTCSSSCCBHHHHHHHHHTTCSSCCEEEEEEEGGGGS---------------CSHHHHHHHH
T ss_pred EEEECCcCCCC----CCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCchhhcC---------------CCCchHHHHH
Confidence 99999997542 355678889999999999999999887 999999999985 4689999999
Q ss_pred HHHHHHHHHhhCCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHHHhCCCCceeEecccCCCCCCceeeeeee
Q 019795 163 CEEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAVRDYIH 242 (335)
Q Consensus 163 ~E~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~v~ 242 (335)
+|++++.++++. +++++++||+++||+...+. ...+++.+......+.+ +.+ + ++...++|+|
T Consensus 110 ~E~~~~~~~~~~-g~~~~i~R~~~v~G~~~~~~--------~~~~~~~~~~~~~~~~~-~~~-~------~~~~~~~~i~ 172 (369)
T 3st7_A 110 GEQLLREYAEEY-GNTVYIYRWPNLFGKWCKPN--------YNSVIATFCYKIARNEE-IQV-N------DRNVELTLNY 172 (369)
T ss_dssp HHHHHHHHHHHH-CCCEEEEEECEEECTTCCTT--------SSCHHHHHHHHHHTTCC-CCC-S------CTTCEEEEEE
T ss_pred HHHHHHHHHHHh-CCCEEEEECCceeCCCCCCC--------cchHHHHHHHHHHcCCC-eEe-c------CCCeEEEEEE
Confidence 999999988877 89999999999999964321 23456655544444444 333 2 5788899999
Q ss_pred Hhhhhc----------c--CceEEecCCccccHHHHHHHHHHHhCCCCCceeCCCCCCccceeeccHHHHHHhcCCcccc
Q 019795 243 VMDLAD----------G--CIAYNLGNGKGISVLEMVAAFEKASGKKIPIKFCPRRVGDATAVYAATDKAHKELGWKPKY 310 (335)
Q Consensus 243 ~~D~~~----------~--~~~~nv~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~d~~k~~~~Lg~~p~~ 310 (335)
++|+++ . +++||+++++.+|+.|+++.+.+.+|.+.++...+. + + ..........|||.|..
T Consensus 173 v~Dva~~~~~~l~~~~~~~~~~~~i~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~-~-~----~~~~~l~~~~l~~~p~~ 246 (369)
T 3st7_A 173 VDDIVAEIKRAIEGTPTIENGVPTVPNVFKVTLGEIVDLLYKFKQSRLDRTLPKL-D-N----LFEKDLYSTYLSYLPST 246 (369)
T ss_dssp HHHHHHHHHHHHHTCCCEETTEECCSCCEEEEHHHHHHHHHHHHHHHHHTCCCCT-T-S----HHHHHHHHHHHHTSCTT
T ss_pred HHHHHHHHHHHHhCCcccCCceEEeCCCCceeHHHHHHHHHHHhCCCcccccCCC-C-C----HHHHHHHHHHhcccCCc
Confidence 999997 2 789999999999999999999999987644332221 1 1 11223344568999987
Q ss_pred CHHHHHH
Q 019795 311 GIEDMCA 317 (335)
Q Consensus 311 ~~~~~~~ 317 (335)
++..++.
T Consensus 247 ~~~~~l~ 253 (369)
T 3st7_A 247 DFSYPLL 253 (369)
T ss_dssp CSCCCCC
T ss_pred ceeechh
Confidence 7655443
|
| >3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.97 E-value=7.4e-30 Score=225.59 Aligned_cols=248 Identities=17% Similarity=0.206 Sum_probs=181.5
Q ss_pred CeEEEEcCCChhhHHHHHHHHhC-CCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCCC
Q 019795 5 KNILVTGGAGFIGTHCALQLLQG-GFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKFE 83 (335)
Q Consensus 5 ~~vlItGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~d 83 (335)
|+|||||||||||+++++.|++. |++|++++|++.+..... ..+++++.+|++|++++.++++ ++|
T Consensus 1 M~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~~-----------~~~v~~~~~D~~d~~~l~~~~~--~~d 67 (289)
T 3e48_A 1 MNIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDDW-----------RGKVSVRQLDYFNQESMVEAFK--GMD 67 (289)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGGG-----------BTTBEEEECCTTCHHHHHHHTT--TCS
T ss_pred CEEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHhh-----------hCCCEEEEcCCCCHHHHHHHHh--CCC
Confidence 47999999999999999999998 999999999765432211 1578999999999999999998 899
Q ss_pred EEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccCCCCCCCccCCCCCCCCChhHHhHHHH
Q 019795 84 AVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQWC 163 (335)
Q Consensus 84 ~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~Y~~sK~~~ 163 (335)
+|||+|+.... ...|+.++.+++++|++.++++||++||.+ ... +.+. .+...+..+
T Consensus 68 ~vi~~a~~~~~----------~~~~~~~~~~l~~aa~~~gv~~iv~~Ss~~---~~~------~~~~----~~~~~~~~~ 124 (289)
T 3e48_A 68 TVVFIPSIIHP----------SFKRIPEVENLVYAAKQSGVAHIIFIGYYA---DQH------NNPF----HMSPYFGYA 124 (289)
T ss_dssp EEEECCCCCCS----------HHHHHHHHHHHHHHHHHTTCCEEEEEEESC---CST------TCCS----TTHHHHHHH
T ss_pred EEEEeCCCCcc----------chhhHHHHHHHHHHHHHcCCCEEEEEcccC---CCC------CCCC----ccchhHHHH
Confidence 99999987432 123889999999999999999999999943 211 1111 122222344
Q ss_pred HHHHHHHHhhCCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHHHhCCCCceeEecccCCCCCCceeeeeeeH
Q 019795 164 EEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAVRDYIHV 243 (335)
Q Consensus 164 E~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~v~~ 243 (335)
|+.+.. . +++++++||+.+||+ +..++.....+.. ..++ .++..++|+|+
T Consensus 125 e~~~~~----~-g~~~~ilrp~~~~~~----------------~~~~~~~~~~~~~---~~~~------~g~~~~~~i~~ 174 (289)
T 3e48_A 125 SRLLST----S-GIDYTYVRMAMYMDP----------------LKPYLPELMNMHK---LIYP------AGDGRINYITR 174 (289)
T ss_dssp HHHHHH----H-CCEEEEEEECEESTT----------------HHHHHHHHHHHTE---ECCC------CTTCEEEEECH
T ss_pred HHHHHH----c-CCCEEEEeccccccc----------------cHHHHHHHHHCCC---EecC------CCCceeeeEEH
Confidence 555442 2 999999999999996 3334444433332 2233 57788999999
Q ss_pred hhhhc-----------cCceEEecCCccccHHHHHHHHHHHhCCCCCceeCCC--------CCCcc-------------c
Q 019795 244 MDLAD-----------GCIAYNLGNGKGISVLEMVAAFEKASGKKIPIKFCPR--------RVGDA-------------T 291 (335)
Q Consensus 244 ~D~~~-----------~~~~~nv~~~~~~s~~el~~~i~~~~g~~~~~~~~~~--------~~~~~-------------~ 291 (335)
+|+++ .+++||++ ++.+|+.|+++.+.+.+|+++.+...+. .+... .
T Consensus 175 ~Dva~~~~~~l~~~~~~g~~~~~~-~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g 253 (289)
T 3e48_A 175 NDIARGVIAIIKNPDTWGKRYLLS-GYSYDMKELAAILSEASGTEIKYEPVSLETFAEMYDEPKGFGALLASMYHAGARG 253 (289)
T ss_dssp HHHHHHHHHHHHCGGGTTCEEEEC-CEEEEHHHHHHHHHHHHTSCCEECCCCHHHHHHHTCCSTTHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHcCCCcCCceEEeC-CCcCCHHHHHHHHHHHHCCceeEEeCCHHHHHHHhcCCccHHHHHHHHHHHHHCC
Confidence 99997 37899999 9999999999999999998765544332 00110 1
Q ss_pred eeeccHHHHHHhcCCccccCHHHHHHHHH
Q 019795 292 AVYAATDKAHKELGWKPKYGIEDMCAHQW 320 (335)
Q Consensus 292 ~~~~d~~k~~~~Lg~~p~~~~~~~~~~~~ 320 (335)
....+...+++.||++|+ ++++.+++..
T Consensus 254 ~~~~~~~~~~~~~G~~p~-~~~~~~~~~~ 281 (289)
T 3e48_A 254 LLDQESNDFKQLVNDQPQ-TLQSFLQENI 281 (289)
T ss_dssp TTCCCCSHHHHHHSSCCC-CHHHHHHC--
T ss_pred CccccCchHHHHhCCCCC-CHHHHHHHHH
Confidence 223456677889999999 8887776543
|
| >3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.7e-30 Score=221.78 Aligned_cols=205 Identities=18% Similarity=0.202 Sum_probs=161.7
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccce-eEEEccCCCHHHHHHHHhcC
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKL-EFHVGDLRNKDDLDKLFSSQ 80 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i-~~~~~Dl~d~~~~~~~~~~~ 80 (335)
+++|+|||||||||||++++++|+++|++|++++|++...... .. .++ .++.+|++ +++.+++.
T Consensus 19 l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~----~~-------~~~~~~~~~Dl~--~~~~~~~~-- 83 (236)
T 3e8x_A 19 FQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPEL----RE-------RGASDIVVANLE--EDFSHAFA-- 83 (236)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHH----HH-------TTCSEEEECCTT--SCCGGGGT--
T ss_pred cCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHH----Hh-------CCCceEEEcccH--HHHHHHHc--
Confidence 5689999999999999999999999999999999975543222 11 467 89999999 66777787
Q ss_pred CCCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccCCCCCCCccCCCCCCCCChhHHhH
Q 019795 81 KFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTK 160 (335)
Q Consensus 81 ~~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~Y~~sK 160 (335)
++|+|||+|+... ..+++..+++|+.++.+++++|++.++++||++||...+.. +..+ .+.+.|+.+|
T Consensus 84 ~~D~vi~~ag~~~----~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~-------~~~~-~~~~~Y~~sK 151 (236)
T 3e8x_A 84 SIDAVVFAAGSGP----HTGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSSVGTVDP-------DQGP-MNMRHYLVAK 151 (236)
T ss_dssp TCSEEEECCCCCT----TSCHHHHHHTTTHHHHHHHHHHHHHTCCEEEEECCTTCSCG-------GGSC-GGGHHHHHHH
T ss_pred CCCEEEECCCCCC----CCCccccchhhHHHHHHHHHHHHHcCCCEEEEEecCCCCCC-------CCCh-hhhhhHHHHH
Confidence 8999999999753 35677899999999999999999999999999999544321 2222 4567899999
Q ss_pred HHHHHHHHHHHhhCCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHHHhCCCCceeEecccCCCCCCceeeee
Q 019795 161 QWCEEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAVRDY 240 (335)
Q Consensus 161 ~~~E~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 240 (335)
..+|++++ .. +++++++||+.+||+... ..+...+ ++...+++
T Consensus 152 ~~~e~~~~----~~-gi~~~~lrpg~v~~~~~~--------------------------~~~~~~~------~~~~~~~~ 194 (236)
T 3e8x_A 152 RLADDELK----RS-SLDYTIVRPGPLSNEEST--------------------------GKVTVSP------HFSEITRS 194 (236)
T ss_dssp HHHHHHHH----HS-SSEEEEEEECSEECSCCC--------------------------SEEEEES------SCSCCCCC
T ss_pred HHHHHHHH----HC-CCCEEEEeCCcccCCCCC--------------------------CeEEecc------CCCcccCc
Confidence 99999886 33 999999999999998321 0022222 34456899
Q ss_pred eeHhhhhc-----------cCceEEecCCccccHHHHHHHHH
Q 019795 241 IHVMDLAD-----------GCIAYNLGNGKGISVLEMVAAFE 271 (335)
Q Consensus 241 v~~~D~~~-----------~~~~~nv~~~~~~s~~el~~~i~ 271 (335)
+|++|+++ .+++||++++ .+++.|+++.+.
T Consensus 195 i~~~Dva~~~~~~~~~~~~~g~~~~v~~~-~~~~~e~~~~i~ 235 (236)
T 3e8x_A 195 ITRHDVAKVIAELVDQQHTIGKTFEVLNG-DTPIAKVVEQLG 235 (236)
T ss_dssp EEHHHHHHHHHHHTTCGGGTTEEEEEEEC-SEEHHHHHHTC-
T ss_pred EeHHHHHHHHHHHhcCccccCCeEEEeCC-CcCHHHHHHHhc
Confidence 99999997 4789999877 599999998765
|
| >2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A | Back alignment and structure |
|---|
Probab=99.97 E-value=5.6e-30 Score=227.54 Aligned_cols=262 Identities=16% Similarity=0.084 Sum_probs=186.9
Q ss_pred CCCCCeEEEEcCCChhhHHHHHHHHhCC-CeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc
Q 019795 1 MASEKNILVTGGAGFIGTHCALQLLQGG-FKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS 79 (335)
Q Consensus 1 ~~~~~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~ 79 (335)
|.++|+||||||||+||++++++|+++| ++|++++|++.+... ..+.. .+++++.+|++|.+++.++++
T Consensus 2 M~~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~--~~l~~-------~~~~~~~~D~~d~~~l~~~~~- 71 (299)
T 2wm3_A 2 MVDKKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAA--KELRL-------QGAEVVQGDQDDQVIMELALN- 71 (299)
T ss_dssp --CCCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHH--HHHHH-------TTCEEEECCTTCHHHHHHHHT-
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHH--HHHHH-------CCCEEEEecCCCHHHHHHHHh-
Confidence 4456899999999999999999999998 999999997654321 12211 468899999999999999998
Q ss_pred CCCCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccCCCCCCCccCCCCCCCCChhHHh
Q 019795 80 QKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRT 159 (335)
Q Consensus 80 ~~~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~Y~~s 159 (335)
++|+|||+++.... . ....|+.++.+++++|++.++++||++|+..+|+.... .+...|+.+
T Consensus 72 -~~d~vi~~a~~~~~----~----~~~~~~~~~~~~~~aa~~~gv~~iv~~S~~~~~~~~~~---------~~~~~y~~s 133 (299)
T 2wm3_A 72 -GAYATFIVTNYWES----C----SQEQEVKQGKLLADLARRLGLHYVVYSGLENIKKLTAG---------RLAAAHFDG 133 (299)
T ss_dssp -TCSEEEECCCHHHH----T----CHHHHHHHHHHHHHHHHHHTCSEEEECCCCCHHHHTTT---------SCCCHHHHH
T ss_pred -cCCEEEEeCCCCcc----c----cchHHHHHHHHHHHHHHHcCCCEEEEEcCccccccCCC---------cccCchhhH
Confidence 79999999985311 1 13467889999999999999999999888887753211 234689999
Q ss_pred HHHHHHHHHHHHhhCCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHHHhCCCCceeEecccCCCCCCceeee
Q 019795 160 KQWCEEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAVRD 239 (335)
Q Consensus 160 K~~~E~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 239 (335)
|..+|++++.. +++++++||+.+||+.... +.+. ....+....+. .+ .++..++
T Consensus 134 K~~~e~~~~~~-----gi~~~ilrp~~~~~~~~~~------------~~~~--~~~~g~~~~~~-~~------~~~~~~~ 187 (299)
T 2wm3_A 134 KGEVEEYFRDI-----GVPMTSVRLPCYFENLLSH------------FLPQ--KAPDGKSYLLS-LP------TGDVPMD 187 (299)
T ss_dssp HHHHHHHHHHH-----TCCEEEEECCEEGGGGGTT------------TCCE--ECTTSSSEEEC-CC------CTTSCEE
T ss_pred HHHHHHHHHHC-----CCCEEEEeecHHhhhchhh------------cCCc--ccCCCCEEEEE-ec------CCCCccc
Confidence 99999998753 8999999999999973210 0000 00111110011 11 3567789
Q ss_pred eeeHhhhhc------------cCceEEecCCccccHHHHHHHHHHHhCCCCCceeCCCCC------Cc---c--------
Q 019795 240 YIHVMDLAD------------GCIAYNLGNGKGISVLEMVAAFEKASGKKIPIKFCPRRV------GD---A-------- 290 (335)
Q Consensus 240 ~v~~~D~~~------------~~~~~nv~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~------~~---~-------- 290 (335)
|+|++|+++ .+++||+++ +.+|+.|+++.+.+.+|+++.+...+... .. .
T Consensus 188 ~i~~~Dva~~~~~~l~~~~~~~g~~~~~~g-~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 266 (299)
T 2wm3_A 188 GMSVSDLGPVVLSLLKMPEKYVGQNIGLST-CRHTAEEYAALLTKHTRKVVHDAKMTPEDYEKLGFPGARDLANMFRFYA 266 (299)
T ss_dssp EECGGGHHHHHHHHHHSHHHHTTCEEECCS-EEECHHHHHHHHHHHHSSCEEECCCCTHHHHTTCSTTHHHHHHHHHHHT
T ss_pred eecHHHHHHHHHHHHcChhhhCCeEEEeee-ccCCHHHHHHHHHHHHCCCceeEecCHHHHHhcCCCcHHHHHHHHHHHH
Confidence 999999987 367999975 68999999999999999876554443210 00 0
Q ss_pred ceeeccHHHHHHhcCCccccCHHHHHHHH
Q 019795 291 TAVYAATDKAHKELGWKPKYGIEDMCAHQ 319 (335)
Q Consensus 291 ~~~~~d~~k~~~~Lg~~p~~~~~~~~~~~ 319 (335)
... .......+.+|.+|+ +|++.+++.
T Consensus 267 ~~~-~~~~~~~~~~g~~~~-~~~~~~~~~ 293 (299)
T 2wm3_A 267 LRP-DRDIELTLRLNPKAL-TLDQWLEQH 293 (299)
T ss_dssp TCC-CCCHHHHHHHCTTCC-CHHHHHHHH
T ss_pred hcC-CCCHHHHHHhCCCCC-CHHHHHHhC
Confidence 001 112234567887776 888887765
|
| >3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.5e-30 Score=220.79 Aligned_cols=198 Identities=16% Similarity=0.214 Sum_probs=160.6
Q ss_pred CeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCC-HHHHHHHHhcCCCC
Q 019795 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRN-KDDLDKLFSSQKFE 83 (335)
Q Consensus 5 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d-~~~~~~~~~~~~~d 83 (335)
|+|||||||||||++++++|+++|++|++++|++.+.... .++.++.+|++| .+++.++++ ++|
T Consensus 1 M~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~-------------~~~~~~~~D~~d~~~~~~~~~~--~~d 65 (219)
T 3dqp_A 1 MKIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQY-------------NNVKAVHFDVDWTPEEMAKQLH--GMD 65 (219)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCC-------------TTEEEEECCTTSCHHHHHTTTT--TCS
T ss_pred CeEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhhc-------------CCceEEEecccCCHHHHHHHHc--CCC
Confidence 4899999999999999999999999999999975432211 468999999999 999999998 899
Q ss_pred EEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccCCCCCCCccCCCCCCCCChhHHhHHHH
Q 019795 84 AVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQWC 163 (335)
Q Consensus 84 ~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~Y~~sK~~~ 163 (335)
+|||+|+.... ..+++|+.++.+++++|++.++++||++||.++++.. +..| .+..|.+.|+.+|..+
T Consensus 66 ~vi~~ag~~~~--------~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~~---~~~e-~~~~~~~~Y~~sK~~~ 133 (219)
T 3dqp_A 66 AIINVSGSGGK--------SLLKVDLYGAVKLMQAAEKAEVKRFILLSTIFSLQPE---KWIG-AGFDALKDYYIAKHFA 133 (219)
T ss_dssp EEEECCCCTTS--------SCCCCCCHHHHHHHHHHHHTTCCEEEEECCTTTTCGG---GCCS-HHHHHTHHHHHHHHHH
T ss_pred EEEECCcCCCC--------CcEeEeHHHHHHHHHHHHHhCCCEEEEECcccccCCC---cccc-cccccccHHHHHHHHH
Confidence 99999998531 3678899999999999999999999999998776532 3344 4455677899999999
Q ss_pred HHHHHHHHhhCCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHHHhCCCCceeEecccCCCCCCceeeeeeeH
Q 019795 164 EEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAVRDYIHV 243 (335)
Q Consensus 164 E~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~v~~ 243 (335)
|++++ +.. +++++++||+.+||+... ..+. . +...++|+++
T Consensus 134 e~~~~---~~~-~i~~~ilrp~~v~g~~~~--------------------------~~~~-~--------~~~~~~~i~~ 174 (219)
T 3dqp_A 134 DLYLT---KET-NLDYTIIQPGALTEEEAT--------------------------GLID-I--------NDEVSASNTI 174 (219)
T ss_dssp HHHHH---HSC-CCEEEEEEECSEECSCCC--------------------------SEEE-E--------SSSCCCCEEH
T ss_pred HHHHH---hcc-CCcEEEEeCceEecCCCC--------------------------Cccc-c--------CCCcCCcccH
Confidence 99986 333 999999999999997321 0011 1 2456799999
Q ss_pred hhhhc-----------cCceEEecCCccccHHHHHHH
Q 019795 244 MDLAD-----------GCIAYNLGNGKGISVLEMVAA 269 (335)
Q Consensus 244 ~D~~~-----------~~~~~nv~~~~~~s~~el~~~ 269 (335)
+|+++ .+++||+++++ .++.|+++.
T Consensus 175 ~Dva~~i~~~l~~~~~~g~~~~i~~g~-~~~~e~~~~ 210 (219)
T 3dqp_A 175 GDVADTIKELVMTDHSIGKVISMHNGK-TAIKEALES 210 (219)
T ss_dssp HHHHHHHHHHHTCGGGTTEEEEEEECS-EEHHHHHHT
T ss_pred HHHHHHHHHHHhCccccCcEEEeCCCC-ccHHHHHHH
Confidence 99997 47899998774 999988764
|
| >1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=3.5e-29 Score=216.61 Aligned_cols=221 Identities=17% Similarity=0.207 Sum_probs=164.7
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhC--CCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQG--GFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~ 79 (335)
+++|+|||||||||||++++++|+++ |++|++++|++.+. ..+ ..++.++.+|++|.+++.++++
T Consensus 2 ~~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~----~~~--------~~~~~~~~~D~~d~~~~~~~~~- 68 (253)
T 1xq6_A 2 ANLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGK----EKI--------GGEADVFIGDITDADSINPAFQ- 68 (253)
T ss_dssp CSCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHH----HHT--------TCCTTEEECCTTSHHHHHHHHT-
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCch----hhc--------CCCeeEEEecCCCHHHHHHHHc-
Confidence 56889999999999999999999999 89999999964321 111 1567899999999999999998
Q ss_pred CCCCEEEEcccccchhh-------------hhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccCCCCCCCccC
Q 019795 80 QKFEAVIHFGALKAVAE-------------SVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQPEKIPCVE 146 (335)
Q Consensus 80 ~~~d~vi~~a~~~~~~~-------------~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~e 146 (335)
++|+|||+|+...... ..+.....+++|+.++.+++++|++.++++||++||.+++..
T Consensus 69 -~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~~~-------- 139 (253)
T 1xq6_A 69 -GIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGSMGGTNP-------- 139 (253)
T ss_dssp -TCSEEEECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEEEETTTTCT--------
T ss_pred -CCCEEEEeccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHcCCCEEEEEcCccCCCC--------
Confidence 7999999999743210 112223568999999999999999998899999999876521
Q ss_pred CCCCCC--CChhHHhHHHHHHHHHHHHhhCCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHHHhCCCCceeE
Q 019795 147 DFPYGA--MNPYGRTKQWCEEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNV 224 (335)
Q Consensus 147 ~~~~~~--~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (335)
..+..+ .+.|+.+|..+|.+++. . +++++++||+.+||+.... .. +. .+... .+
T Consensus 140 ~~~~~~~~~~~y~~sK~~~e~~~~~----~-~i~~~~vrpg~v~~~~~~~---------~~-~~-------~~~~~--~~ 195 (253)
T 1xq6_A 140 DHPLNKLGNGNILVWKRKAEQYLAD----S-GTPYTIIRAGGLLDKEGGV---------RE-LL-------VGKDD--EL 195 (253)
T ss_dssp TCGGGGGGGCCHHHHHHHHHHHHHT----S-SSCEEEEEECEEECSCSSS---------SC-EE-------EESTT--GG
T ss_pred CCccccccchhHHHHHHHHHHHHHh----C-CCceEEEecceeecCCcch---------hh-hh-------ccCCc--CC
Confidence 111111 13477899999998763 3 9999999999999984210 00 00 01111 11
Q ss_pred ecccCCCCCCceeeeeeeHhhhhc-----------cCceEEecCCc---cccHHHHHHHHHHHhCCC
Q 019795 225 YGQDYPTKDGSAVRDYIHVMDLAD-----------GCIAYNLGNGK---GISVLEMVAAFEKASGKK 277 (335)
Q Consensus 225 ~g~~~~~~~~~~~~~~v~~~D~~~-----------~~~~~nv~~~~---~~s~~el~~~i~~~~g~~ 277 (335)
++ ...+++|++|+++ .+++||+++++ .+|+.|+++.+.+.+|++
T Consensus 196 ~~---------~~~~~~~~~Dva~~~~~~~~~~~~~g~~~~i~~~~~~~~~s~~e~~~~~~~~~g~~ 253 (253)
T 1xq6_A 196 LQ---------TDTKTVPRADVAEVCIQALLFEEAKNKAFDLGSKPEGTSTPTKDFKALFSQVTSRF 253 (253)
T ss_dssp GG---------SSCCEEEHHHHHHHHHHHTTCGGGTTEEEEEEECCTTTSCCCCCHHHHHHTCCCCC
T ss_pred cC---------CCCcEEcHHHHHHHHHHHHcCccccCCEEEecCCCcCCCCCHHHHHHHHHHHhCCC
Confidence 11 1246999999987 36799999864 599999999999988853
|
| >1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=2e-28 Score=222.32 Aligned_cols=225 Identities=17% Similarity=0.140 Sum_probs=168.4
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEcc-CCCHHHHHHHHhcCCC
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGD-LRNKDDLDKLFSSQKF 82 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D-l~d~~~~~~~~~~~~~ 82 (335)
+|+|+|||||||||++|++.|+++|++|++++|+..+.. ...+.. ..++.++.+| ++|.+++.++++ ++
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~--~~~l~~------~~~v~~v~~D~l~d~~~l~~~~~--~~ 74 (352)
T 1xgk_A 5 KKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLI--AEELQA------IPNVTLFQGPLLNNVPLMDTLFE--GA 74 (352)
T ss_dssp CCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHH--HHHHHT------STTEEEEESCCTTCHHHHHHHHT--TC
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhh--HHHHhh------cCCcEEEECCccCCHHHHHHHHh--cC
Confidence 689999999999999999999999999999999765431 112221 1368899999 999999999998 79
Q ss_pred CEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcC-CCEEEEecccc--ccCCCCCCCccCCCCCCCCChhHHh
Q 019795 83 EAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYN-CKKLVFSSSAT--IYGQPEKIPCVEDFPYGAMNPYGRT 159 (335)
Q Consensus 83 d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~v~~Ss~~--vyg~~~~~~~~e~~~~~~~~~Y~~s 159 (335)
|+|||+++... ...|+.+ .+++++|++.+ +++||++||.. .|+. .+.+.|+.+
T Consensus 75 d~Vi~~a~~~~-----------~~~~~~~-~~l~~aa~~~g~v~~~V~~SS~~~~~~~~------------~~~~~y~~s 130 (352)
T 1xgk_A 75 HLAFINTTSQA-----------GDEIAIG-KDLADAAKRAGTIQHYIYSSMPDHSLYGP------------WPAVPMWAP 130 (352)
T ss_dssp SEEEECCCSTT-----------SCHHHHH-HHHHHHHHHHSCCSEEEEEECCCGGGTSS------------CCCCTTTHH
T ss_pred CEEEEcCCCCC-----------cHHHHHH-HHHHHHHHHcCCccEEEEeCCccccccCC------------CCCccHHHH
Confidence 99999987531 1236666 99999999998 99999999975 3421 233679999
Q ss_pred HHHHHHHHHHHHhhCCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHH-HhCCCCceeEecccCCCCCCceee
Q 019795 160 KQWCEEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQV-AVGRHPELNVYGQDYPTKDGSAVR 238 (335)
Q Consensus 160 K~~~E~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~ 238 (335)
|..+|++++. . +++++++||+ +||+...... .+.+... ...+...+.+++ +++..+
T Consensus 131 K~~~E~~~~~----~-gi~~~ivrpg-~~g~~~~~~~-----------~~~~~~~~~~~g~~~~~~~~------~~~~~~ 187 (352)
T 1xgk_A 131 KFTVENYVRQ----L-GLPSTFVYAG-IYNNNFTSLP-----------YPLFQMELMPDGTFEWHAPF------DPDIPL 187 (352)
T ss_dssp HHHHHHHHHT----S-SSCEEEEEEC-EEGGGCBSSS-----------CSSCBEEECTTSCEEEEESS------CTTSCE
T ss_pred HHHHHHHHHH----c-CCCEEEEecc-eecCCchhcc-----------cccccccccCCCceEEeecc------CCCCce
Confidence 9999999875 2 8999999975 7887532110 0011000 011221123455 567889
Q ss_pred eeeeH-hhhhc-------------cCceEEecCCccccHHHHHHHHHHHhCCCCCceeCCCC
Q 019795 239 DYIHV-MDLAD-------------GCIAYNLGNGKGISVLEMVAAFEKASGKKIPIKFCPRR 286 (335)
Q Consensus 239 ~~v~~-~D~~~-------------~~~~~nv~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~ 286 (335)
+|+|+ +|+++ .+++||+++ +.+|+.|+++.+.+.+|.+.++...|..
T Consensus 188 ~~i~v~~Dva~ai~~~l~~~~~~~~g~~~~l~~-~~~s~~e~~~~i~~~~G~~~~~~~vp~~ 248 (352)
T 1xgk_A 188 PWLDAEHDVGPALLQIFKDGPQKWNGHRIALTF-ETLSPVQVCAAFSRALNRRVTYVQVPKV 248 (352)
T ss_dssp EEECHHHHHHHHHHHHHHHCHHHHTTCEEEECS-EEECHHHHHHHHHHHHTSCEEEEECSSC
T ss_pred eeEecHHHHHHHHHHHHhCCchhhCCeEEEEec-CCCCHHHHHHHHHHHHCCCCceEECCHH
Confidence 99999 89986 268999984 6799999999999999998777666644
|
| >1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.96 E-value=2.2e-28 Score=218.49 Aligned_cols=235 Identities=14% Similarity=0.155 Sum_probs=168.6
Q ss_pred CCCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCc-hhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc
Q 019795 1 MASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSV-PEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS 79 (335)
Q Consensus 1 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~ 79 (335)
|.+||+|+|||||||||+++++.|+++|++|++++|+.... ......+..... .+++++.+|++|.+++.++++
T Consensus 1 M~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~----~~~~~~~~D~~d~~~l~~~~~- 75 (313)
T 1qyd_A 1 MDKKSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQ----LGAKLIEASLDDHQRLVDALK- 75 (313)
T ss_dssp -CCCCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHT----TTCEEECCCSSCHHHHHHHHT-
T ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHHHHh----CCeEEEeCCCCCHHHHHHHHh-
Confidence 55578999999999999999999999999999999976542 222222222111 578999999999999999998
Q ss_pred CCCCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcC-CCEEEEeccccccCCCCCCCccCCCCCCC-CChhH
Q 019795 80 QKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYN-CKKLVFSSSATIYGQPEKIPCVEDFPYGA-MNPYG 157 (335)
Q Consensus 80 ~~~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~-~~~Y~ 157 (335)
++|+|||+++.... ..|+.++.+++++|++.+ +++||+ | +||...... +.+..| ...|
T Consensus 76 -~~d~vi~~a~~~~~-----------~~~~~~~~~l~~aa~~~g~v~~~v~-S---~~g~~~~~~---~~~~~p~~~~y- 135 (313)
T 1qyd_A 76 -QVDVVISALAGGVL-----------SHHILEQLKLVEAIKEAGNIKRFLP-S---EFGMDPDIM---EHALQPGSITF- 135 (313)
T ss_dssp -TCSEEEECCCCSSS-----------STTTTTHHHHHHHHHHSCCCSEEEC-S---CCSSCTTSC---CCCCSSTTHHH-
T ss_pred -CCCEEEECCccccc-----------hhhHHHHHHHHHHHHhcCCCceEEe-c---CCcCCcccc---ccCCCCCcchH-
Confidence 89999999987432 127788899999999998 999985 3 455322111 223334 4468
Q ss_pred HhHHHHHHHHHHHHhhCCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHHHhCCCCceeEecccCCCCCCcee
Q 019795 158 RTKQWCEEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAV 237 (335)
Q Consensus 158 ~sK~~~E~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 237 (335)
.+|..+|++++. . +++++++||+.++|....... ... . .. ...... +.++| +++..
T Consensus 136 ~sK~~~e~~~~~----~-g~~~~ilrp~~~~~~~~~~~~--------~~~-~--~~-~~~~~~-~~~~~------~g~~~ 191 (313)
T 1qyd_A 136 IDKRKVRRAIEA----A-SIPYTYVSSNMFAGYFAGSLA--------QLD-G--HM-MPPRDK-VLIYG------DGNVK 191 (313)
T ss_dssp HHHHHHHHHHHH----T-TCCBCEEECCEEHHHHTTTSS--------CTT-C--CS-SCCSSE-ECCBT------TSCSE
T ss_pred HHHHHHHHHHHh----c-CCCeEEEEeceeccccccccc--------ccc-c--cc-cCCCCe-EEEeC------CCCce
Confidence 999999998864 3 899999999988875211000 000 0 00 001111 44556 67888
Q ss_pred eeeeeHhhhhc-----------cCceEEecCC-ccccHHHHHHHHHHHhCCCCCceeCC
Q 019795 238 RDYIHVMDLAD-----------GCIAYNLGNG-KGISVLEMVAAFEKASGKKIPIKFCP 284 (335)
Q Consensus 238 ~~~v~~~D~~~-----------~~~~~nv~~~-~~~s~~el~~~i~~~~g~~~~~~~~~ 284 (335)
++|+|++|+++ .++.|+++++ +.+|+.|+++.+.+.+|++.++...+
T Consensus 192 ~~~i~~~Dva~~~~~~l~~~~~~~~~~~~~g~~~~~s~~e~~~~~~~~~g~~~~~~~~~ 250 (313)
T 1qyd_A 192 GIWVDEDDVGTYTIKSIDDPQTLNKTMYIRPPMNILSQKEVIQIWERLSEQNLDKIYIS 250 (313)
T ss_dssp EEEECHHHHHHHHHHHTTCGGGSSSEEECCCGGGEEEHHHHHHHHHHHHTCCCEECCBC
T ss_pred EEEEEHHHHHHHHHHHHhCcccCCceEEEeCCCCccCHHHHHHHHHHhcCCCCceEECC
Confidence 99999999987 3677888764 78999999999999999886655443
|
| >3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.4e-28 Score=208.58 Aligned_cols=207 Identities=13% Similarity=0.122 Sum_probs=134.5
Q ss_pred CeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCCCE
Q 019795 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKFEA 84 (335)
Q Consensus 5 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~d~ 84 (335)
|+|||||||||||++|+++|+++|++|++++|++.+.. .+. +++.++.+|++|.++ +.+. ++|+
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~----~~~--------~~~~~~~~D~~d~~~--~~~~--~~d~ 64 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKIT----QTH--------KDINILQKDIFDLTL--SDLS--DQNV 64 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHH----HHC--------SSSEEEECCGGGCCH--HHHT--TCSE
T ss_pred CeEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhh----hcc--------CCCeEEeccccChhh--hhhc--CCCE
Confidence 47999999999999999999999999999999754321 111 468899999999877 6666 7999
Q ss_pred EEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccc-cCCCCCCCccCCCCCCCCChhHHhHHHH
Q 019795 85 VIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATI-YGQPEKIPCVEDFPYGAMNPYGRTKQWC 163 (335)
Q Consensus 85 vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~v-yg~~~~~~~~e~~~~~~~~~Y~~sK~~~ 163 (335)
|||+|+.... ....|+.++.+++++|++.+++++|++||..+ |+.....+..|+.+..|.+.|+.+|..+
T Consensus 65 vi~~ag~~~~---------~~~~~~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~~k~~~ 135 (221)
T 3ew7_A 65 VVDAYGISPD---------EAEKHVTSLDHLISVLNGTVSPRLLVVGGAASLQIDEDGNTLLESKGLREAPYYPTARAQA 135 (221)
T ss_dssp EEECCCSSTT---------TTTSHHHHHHHHHHHHCSCCSSEEEEECCCC-------------------CCCSCCHHHHH
T ss_pred EEECCcCCcc---------ccchHHHHHHHHHHHHHhcCCceEEEEecceEEEcCCCCccccccCCCCCHHHHHHHHHHH
Confidence 9999998421 24569999999999999998899999999765 4444444677777888888899999999
Q ss_pred HHHHHHHHh-hCCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHHHhCCCCceeEecccCCCCCCceeeeeee
Q 019795 164 EEIAFDVQK-ADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAVRDYIH 242 (335)
Q Consensus 164 E~~~~~~~~-~~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~v~ 242 (335)
|.+. .+.. .. +++++++||+.+||+.+. ... + ..+... +.+.+ ++ .++++
T Consensus 136 e~~~-~~~~~~~-gi~~~ivrp~~v~g~~~~----------~~~---~----~~~~~~-~~~~~------~~---~~~i~ 186 (221)
T 3ew7_A 136 KQLE-HLKSHQA-EFSWTYISPSAMFEPGER----------TGD---Y----QIGKDH-LLFGS------DG---NSFIS 186 (221)
T ss_dssp HHHH-HHHTTTT-TSCEEEEECSSCCCCC------------------------------------------------CCC
T ss_pred HHHH-HHHhhcc-CccEEEEeCcceecCCCc----------cCc---e----Eecccc-ceecC------CC---CceEe
Confidence 9863 3333 34 999999999999998321 000 0 011111 23333 22 37999
Q ss_pred Hhhhhc-----------cCceEEecCCccccHHH
Q 019795 243 VMDLAD-----------GCIAYNLGNGKGISVLE 265 (335)
Q Consensus 243 ~~D~~~-----------~~~~~nv~~~~~~s~~e 265 (335)
++|+++ .+++||++++...+..|
T Consensus 187 ~~Dva~~~~~~l~~~~~~g~~~~~~~~~~~~~~~ 220 (221)
T 3ew7_A 187 MEDYAIAVLDEIERPNHLNEHFTVAGKLEHHHHH 220 (221)
T ss_dssp HHHHHHHHHHHHHSCSCTTSEEECCC--------
T ss_pred HHHHHHHHHHHHhCccccCCEEEECCCCcccccc
Confidence 999997 58899999888777654
|
| >3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} | Back alignment and structure |
|---|
Probab=99.95 E-value=3.2e-28 Score=207.00 Aligned_cols=207 Identities=11% Similarity=-0.040 Sum_probs=149.0
Q ss_pred CeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCCCE
Q 019795 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKFEA 84 (335)
Q Consensus 5 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~d~ 84 (335)
|+|||||||||||++|+++|+++|++|++++|++.+.. .+ . ..++.++.+|++|.++ +.+. ++|+
T Consensus 1 MkilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~----~~---~----~~~~~~~~~D~~d~~~--~~~~--~~d~ 65 (224)
T 3h2s_A 1 MKIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAA----DR---L----GATVATLVKEPLVLTE--ADLD--SVDA 65 (224)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH----HH---T----CTTSEEEECCGGGCCH--HHHT--TCSE
T ss_pred CEEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecccccc----cc---c----CCCceEEecccccccH--hhcc--cCCE
Confidence 47999999999999999999999999999999643321 11 1 1578999999999877 6666 8999
Q ss_pred EEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccC-CCCC--CCccCCCCCCCCChhHHhHH
Q 019795 85 VIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYG-QPEK--IPCVEDFPYGAMNPYGRTKQ 161 (335)
Q Consensus 85 vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg-~~~~--~~~~e~~~~~~~~~Y~~sK~ 161 (335)
|||+|+.... . ....+|+.++.+++++|++.+ +++|++||++.+. .... .+.+|+....|.+.|+.+|.
T Consensus 66 vi~~ag~~~~---~----~~~~~n~~~~~~l~~a~~~~~-~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~ 137 (224)
T 3h2s_A 66 VVDALSVPWG---S----GRGYLHLDFATHLVSLLRNSD-TLAVFILGSASLAMPGADHPMILDFPESAASQPWYDGALY 137 (224)
T ss_dssp EEECCCCCTT---S----SCTHHHHHHHHHHHHTCTTCC-CEEEEECCGGGSBCTTCSSCGGGGCCGGGGGSTTHHHHHH
T ss_pred EEECCccCCC---c----chhhHHHHHHHHHHHHHHHcC-CcEEEEecceeeccCCCCccccccCCCCCccchhhHHHHH
Confidence 9999998511 1 125679999999999999999 8999999976543 3332 24444445555788999999
Q ss_pred HHHHHHHHHHhhCCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHHHhCCCCceeEecccCCCCCCceeeeee
Q 019795 162 WCEEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAVRDYI 241 (335)
Q Consensus 162 ~~E~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~v 241 (335)
.+|.+ ..+.++. +++++++||+.+||+.+.. . +. .+... +. .+...++++
T Consensus 138 ~~e~~-~~~~~~~-~i~~~ivrp~~v~g~~~~~----------~-~~-------~~~~~-~~---------~~~~~~~~i 187 (224)
T 3h2s_A 138 QYYEY-QFLQMNA-NVNWIGISPSEAFPSGPAT----------S-YV-------AGKDT-LL---------VGEDGQSHI 187 (224)
T ss_dssp HHHHH-HHHTTCT-TSCEEEEEECSBCCCCCCC----------C-EE-------EESSB-CC---------CCTTSCCBC
T ss_pred HHHHH-HHHHhcC-CCcEEEEcCccccCCCccc----------C-ce-------ecccc-cc---------cCCCCCceE
Confidence 99954 4444444 9999999999999983210 0 00 11111 11 123446899
Q ss_pred eHhhhhc-----------cCceEEecCCccccHH
Q 019795 242 HVMDLAD-----------GCIAYNLGNGKGISVL 264 (335)
Q Consensus 242 ~~~D~~~-----------~~~~~nv~~~~~~s~~ 264 (335)
|++|+++ .+++|++++.+..++.
T Consensus 188 ~~~DvA~~~~~~l~~~~~~g~~~~~~~~~~~~~~ 221 (224)
T 3h2s_A 188 TTGNMALAILDQLEHPTAIRDRIVVRDADLEHHH 221 (224)
T ss_dssp CHHHHHHHHHHHHHSCCCTTSEEEEEECC-----
T ss_pred eHHHHHHHHHHHhcCccccCCEEEEecCcchhcc
Confidence 9999997 4889999877665543
|
| >2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=3.3e-27 Score=211.43 Aligned_cols=221 Identities=19% Similarity=0.217 Sum_probs=163.9
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCC
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKF 82 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~ 82 (335)
|+|+|+||||||+||+++++.|+++|++|++++|+..........+.. .+++++.+|++|.+++.++++ ++
T Consensus 10 m~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~-------~~v~~v~~Dl~d~~~l~~a~~--~~ 80 (318)
T 2r6j_A 10 MKSKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQS-------LGAIIVKGELDEHEKLVELMK--KV 80 (318)
T ss_dssp CCCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHH-------TTCEEEECCTTCHHHHHHHHT--TC
T ss_pred CCCeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhc-------CCCEEEEecCCCHHHHHHHHc--CC
Confidence 346899999999999999999999999999999986532222222211 568899999999999999998 79
Q ss_pred CEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcC-CCEEEEeccccccCCCCCCCccCCCCCCC-CChhHHhH
Q 019795 83 EAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYN-CKKLVFSSSATIYGQPEKIPCVEDFPYGA-MNPYGRTK 160 (335)
Q Consensus 83 d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~-~~~Y~~sK 160 (335)
|+|||+++... +.++.+++++|++.+ +++||+ | +||... +|..+..| ...| .+|
T Consensus 81 d~vi~~a~~~~---------------~~~~~~l~~aa~~~g~v~~~v~-S---~~g~~~----~~~~~~~p~~~~y-~sK 136 (318)
T 2r6j_A 81 DVVISALAFPQ---------------ILDQFKILEAIKVAGNIKRFLP-S---DFGVEE----DRINALPPFEALI-ERK 136 (318)
T ss_dssp SEEEECCCGGG---------------STTHHHHHHHHHHHCCCCEEEC-S---CCSSCT----TTCCCCHHHHHHH-HHH
T ss_pred CEEEECCchhh---------------hHHHHHHHHHHHhcCCCCEEEe-e---ccccCc----ccccCCCCcchhH-HHH
Confidence 99999998631 455788999999998 999984 3 355321 22233333 3458 999
Q ss_pred HHHHHHHHHHHhhCCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHHHhCCCCceeEecccCCCCCCceeeee
Q 019795 161 QWCEEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAVRDY 240 (335)
Q Consensus 161 ~~~E~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 240 (335)
..+|++++. . +++++++||+.+++. +.+.+......... +.+++ +++..++|
T Consensus 137 ~~~e~~~~~----~-~~~~~~lr~~~~~~~----------------~~~~~~~~~~~~~~-~~~~~------~~~~~~~~ 188 (318)
T 2r6j_A 137 RMIRRAIEE----A-NIPYTYVSANCFASY----------------FINYLLRPYDPKDE-ITVYG------TGEAKFAM 188 (318)
T ss_dssp HHHHHHHHH----T-TCCBEEEECCEEHHH----------------HHHHHHCTTCCCSE-EEEET------TSCCEEEE
T ss_pred HHHHHHHHh----c-CCCeEEEEcceehhh----------------hhhhhccccCCCCc-eEEec------CCCceeeE
Confidence 999998864 3 899999999877653 22322211112222 56667 67889999
Q ss_pred eeHhhhhc-----------cCceEEecC-CccccHHHHHHHHHHHhCCCCCceeCC
Q 019795 241 IHVMDLAD-----------GCIAYNLGN-GKGISVLEMVAAFEKASGKKIPIKFCP 284 (335)
Q Consensus 241 v~~~D~~~-----------~~~~~nv~~-~~~~s~~el~~~i~~~~g~~~~~~~~~ 284 (335)
+|++|+++ .+++|++.+ ++.+|+.|+++.+.+.+|.+.++...+
T Consensus 189 i~~~Dva~~~~~~l~~~~~~~~~~~~~g~~~~~s~~e~~~~~~~~~g~~~~~~~~~ 244 (318)
T 2r6j_A 189 NYEQDIGLYTIKVATDPRALNRVVIYRPSTNIITQLELISRWEKKIGKKFKKIHVP 244 (318)
T ss_dssp ECHHHHHHHHHHHTTCGGGTTEEEECCCGGGEEEHHHHHHHHHHHHTCCCEEEEEC
T ss_pred eeHHHHHHHHHHHhcCccccCeEEEecCCCCccCHHHHHHHHHHHhCCCCceeecC
Confidence 99999987 367788765 578999999999999999887655443
|
| >3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=99.95 E-value=8.7e-27 Score=205.12 Aligned_cols=239 Identities=14% Similarity=0.088 Sum_probs=169.3
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcC-
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQ- 80 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~- 80 (335)
+++|+||||||+|+||++++++|+++|++|++++|+..........+ +..+.++.+|++|.+++.++++..
T Consensus 3 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~--------~~~~~~~~~Dv~~~~~~~~~~~~~~ 74 (281)
T 3m1a_A 3 ESAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAY--------PDRAEAISLDVTDGERIDVVAADVL 74 (281)
T ss_dssp -CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHC--------TTTEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc--------cCCceEEEeeCCCHHHHHHHHHHHH
Confidence 46789999999999999999999999999999999765544333221 257899999999999999888753
Q ss_pred ----CCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHH----HHHcCCCEEEEeccccccCCCCCCCccCCC
Q 019795 81 ----KFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQA----MAKYNCKKLVFSSSATIYGQPEKIPCVEDF 148 (335)
Q Consensus 81 ----~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~----~~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~ 148 (335)
++|+|||+||.... ..+.++++..+++|+.++.+++++ +++.+.++||++||...+.
T Consensus 75 ~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~----------- 143 (281)
T 3m1a_A 75 ARYGRVDVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRERGSGSVVNISSFGGQL----------- 143 (281)
T ss_dssp HHHSCCSEEEECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTC-----------
T ss_pred HhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEcCccccC-----------
Confidence 79999999997532 234456778999999996666665 4556678999999977652
Q ss_pred CCCCCChhHHhHHHHHHHHHHHHhh---CCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHHHhCCCCceeEe
Q 019795 149 PYGAMNPYGRTKQWCEEIAFDVQKA---DPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVY 225 (335)
Q Consensus 149 ~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (335)
+..+...|+.||...|.+++.++.+ + ++++.++||+.++++............ ...+....... .. +.
T Consensus 144 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~-gi~v~~v~Pg~v~t~~~~~~~~~~~~~-~~~~~~~~~~~---~~--~~-- 214 (281)
T 3m1a_A 144 SFAGFSAYSATKAALEQLSEGLADEVAPF-GIKVLIVEPGAFRTNLFGKGAAYFSEE-NPAYAEKVGPT---RQ--LV-- 214 (281)
T ss_dssp CCTTCHHHHHHHHHHHHHHHHHHHHHGGG-TEEEEEEEECCBCCTTTCCCCEEECCB-CTTTHHHHHHH---HH--HH--
T ss_pred CCCCchHHHHHHHHHHHHHHHHHHHhhcc-CcEEEEEecCccccccccccccccCCc-chhhHHHhHHH---HH--HH--
Confidence 3455678999999999999998877 4 899999999999876322110000000 11111111110 00 00
Q ss_pred cccCCCCCCceeeeeeeHhhhhc----------cCceEEecCCccccHHHHHHHHHHHhC
Q 019795 226 GQDYPTKDGSAVRDYIHVMDLAD----------GCIAYNLGNGKGISVLEMVAAFEKASG 275 (335)
Q Consensus 226 g~~~~~~~~~~~~~~v~~~D~~~----------~~~~~nv~~~~~~s~~el~~~i~~~~g 275 (335)
.......+.+++|+++ .+..|+++++....+.+.+..+.+.++
T Consensus 215 -------~~~~~~~~~~~~dva~a~~~~~~~~~~~~~~~l~s~~~~~i~g~~~~i~~~~~ 267 (281)
T 3m1a_A 215 -------QGSDGSQPGDPAKAAAAIRLALDTEKTPLRLALGGDAVDFLTGHLDSVRAELT 267 (281)
T ss_dssp -------HC-----CBCHHHHHHHHHHHHHSSSCCSEEEESHHHHHHHHHHHHHHHHHHH
T ss_pred -------hhccCCCCCCHHHHHHHHHHHHhCCCCCeEEecCchHHHHHHHHHHHHHHHHH
Confidence 1223356788999987 467899998888888888888877665
|
| >2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.95 E-value=1.9e-28 Score=206.95 Aligned_cols=197 Identities=15% Similarity=0.089 Sum_probs=153.6
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCC--eEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcC
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGF--KVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQ 80 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~ 80 (335)
++|+|+||||||+||++++++|+++|+ +|++++|++... .+++.++.+|++|.+++.+++
T Consensus 4 ~~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~~---------------~~~~~~~~~D~~~~~~~~~~~--- 65 (215)
T 2a35_A 4 TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAE---------------HPRLDNPVGPLAELLPQLDGS--- 65 (215)
T ss_dssp CCCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCCC---------------CTTEECCBSCHHHHGGGCCSC---
T ss_pred CCceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCccc---------------CCCceEEeccccCHHHHHHhh---
Confidence 567999999999999999999999998 999999976541 146788899999888777665
Q ss_pred CCCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccCCCCCCCccCCCCCCCCChhHHhH
Q 019795 81 KFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTK 160 (335)
Q Consensus 81 ~~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~Y~~sK 160 (335)
+|+|||+|+.... ...+++..+++|+.++.+++++|++.+++++|++||..+|+. +.+.|+.+|
T Consensus 66 -~d~vi~~a~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~-------------~~~~y~~sK 129 (215)
T 2a35_A 66 -IDTAFCCLGTTIK--EAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGADAK-------------SSIFYNRVK 129 (215)
T ss_dssp -CSEEEECCCCCHH--HHSSHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTT-------------CSSHHHHHH
T ss_pred -hcEEEECeeeccc--cCCCHHHHHHhhHHHHHHHHHHHHHcCCCEEEEECCcccCCC-------------CccHHHHHH
Confidence 8999999997542 345677899999999999999999999899999999988742 346899999
Q ss_pred HHHHHHHHHHHhhCCCCe-EEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHHHhCCCCceeEecccCCCCCCceeee
Q 019795 161 QWCEEIAFDVQKADPEWR-IILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAVRD 239 (335)
Q Consensus 161 ~~~E~~~~~~~~~~~~~~-~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 239 (335)
..+|++++. . +++ ++++||+.+||+.... .+...+. +.. .++ + ++ .++
T Consensus 130 ~~~e~~~~~----~-~~~~~~~vrp~~v~g~~~~~-----------~~~~~~~----~~~--~~~-~------~~--~~~ 178 (215)
T 2a35_A 130 GELEQALQE----Q-GWPQLTIARPSLLFGPREEF-----------RLAEILA----API--ARI-L------PG--KYH 178 (215)
T ss_dssp HHHHHHHTT----S-CCSEEEEEECCSEESTTSCE-----------EGGGGTT----CCC--C-----------C--HHH
T ss_pred HHHHHHHHH----c-CCCeEEEEeCceeeCCCCcc-----------hHHHHHH----Hhh--hhc-c------CC--CcC
Confidence 999999864 2 888 9999999999985320 1111111 111 111 1 22 679
Q ss_pred eeeHhhhhc---------cCceEEecCCccccHH
Q 019795 240 YIHVMDLAD---------GCIAYNLGNGKGISVL 264 (335)
Q Consensus 240 ~v~~~D~~~---------~~~~~nv~~~~~~s~~ 264 (335)
++|++|+++ .+++||+++++.+++.
T Consensus 179 ~i~~~Dva~~~~~~~~~~~~~~~~i~~~~~~~~~ 212 (215)
T 2a35_A 179 GIEACDLARALWRLALEEGKGVRFVESDELRKLG 212 (215)
T ss_dssp HHHHHHHHHHHHHHHTCCCSEEEEEEHHHHHHHH
T ss_pred cEeHHHHHHHHHHHHhcCCCCceEEcHHHHHHhh
Confidence 999999997 4679999888766654
|
| >1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.95 E-value=3.8e-27 Score=209.97 Aligned_cols=229 Identities=18% Similarity=0.205 Sum_probs=166.5
Q ss_pred CCCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCc--hhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHh
Q 019795 1 MASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSV--PEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFS 78 (335)
Q Consensus 1 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~--~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~ 78 (335)
|.+||+|+||||||+||+++++.|+++|++|++++|+.... ......+..... .+++++.+|++|.+++.++++
T Consensus 1 M~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~~----~~v~~v~~D~~d~~~l~~~~~ 76 (308)
T 1qyc_A 1 MGSRSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKA----SGANIVHGSIDDHASLVEAVK 76 (308)
T ss_dssp -CCCCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHT----TTCEEECCCTTCHHHHHHHHH
T ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHHh----CCCEEEEeccCCHHHHHHHHc
Confidence 55578999999999999999999999999999999976543 222222222211 578999999999999999998
Q ss_pred cCCCCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcC-CCEEEEeccccccCCCCCCCccCCCCCCC-CChh
Q 019795 79 SQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYN-CKKLVFSSSATIYGQPEKIPCVEDFPYGA-MNPY 156 (335)
Q Consensus 79 ~~~~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~-~~~Y 156 (335)
++|+|||+++... +.++.+++++|++.+ +++||+ | +||.. .+|..+..| ...|
T Consensus 77 --~~d~vi~~a~~~~---------------~~~~~~l~~aa~~~g~v~~~v~-S---~~g~~----~~~~~~~~p~~~~y 131 (308)
T 1qyc_A 77 --NVDVVISTVGSLQ---------------IESQVNIIKAIKEVGTVKRFFP-S---EFGND----VDNVHAVEPAKSVF 131 (308)
T ss_dssp --TCSEEEECCCGGG---------------SGGGHHHHHHHHHHCCCSEEEC-S---CCSSC----TTSCCCCTTHHHHH
T ss_pred --CCCEEEECCcchh---------------hhhHHHHHHHHHhcCCCceEee-c---ccccC----ccccccCCcchhHH
Confidence 7999999998632 345678999999998 999984 4 35432 123334444 3468
Q ss_pred HHhHHHHHHHHHHHHhhCCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHHHhCCCCceeEecccCCCCCCce
Q 019795 157 GRTKQWCEEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSA 236 (335)
Q Consensus 157 ~~sK~~~E~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 236 (335)
.+|..+|++++.. +++++++||+.++|....... . .... ...... +.++| +++.
T Consensus 132 -~sK~~~e~~~~~~-----~~~~~~~r~~~~~~~~~~~~~--------~----~~~~-~~~~~~-~~~~~------~~~~ 185 (308)
T 1qyc_A 132 -EVKAKVRRAIEAE-----GIPYTYVSSNCFAGYFLRSLA--------Q----AGLT-APPRDK-VVILG------DGNA 185 (308)
T ss_dssp -HHHHHHHHHHHHH-----TCCBEEEECCEEHHHHTTTTT--------C----TTCS-SCCSSE-EEEET------TSCC
T ss_pred -HHHHHHHHHHHhc-----CCCeEEEEeceeccccccccc--------c----cccc-CCCCCc-eEEec------CCCc
Confidence 9999999988753 889999999988875211000 0 0000 001112 56677 7888
Q ss_pred eeeeeeHhhhhc-----------cCceEEecC-CccccHHHHHHHHHHHhCCCCCceeCC
Q 019795 237 VRDYIHVMDLAD-----------GCIAYNLGN-GKGISVLEMVAAFEKASGKKIPIKFCP 284 (335)
Q Consensus 237 ~~~~v~~~D~~~-----------~~~~~nv~~-~~~~s~~el~~~i~~~~g~~~~~~~~~ 284 (335)
.++|+|++|+++ .+++|++.+ ++.+|+.|+++.+.+.+|.+.++...+
T Consensus 186 ~~~~i~~~Dva~~~~~~l~~~~~~~~~~~~~g~~~~~s~~e~~~~~~~~~g~~~~~~~~~ 245 (308)
T 1qyc_A 186 RVVFVKEEDIGTFTIKAVDDPRTLNKTLYLRLPANTLSLNELVALWEKKIDKTLEKAYVP 245 (308)
T ss_dssp EEEEECHHHHHHHHHTTSSCGGGTTEEEECCCGGGEEEHHHHHHHHHHHTTSCCEEEEEC
T ss_pred eEEEecHHHHHHHHHHHHhCccccCeEEEEeCCCCccCHHHHHHHHHHHhCCCCceEeCC
Confidence 999999999987 367788875 478999999999999999887665443
|
| >2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A | Back alignment and structure |
|---|
Probab=99.95 E-value=1.2e-26 Score=199.66 Aligned_cols=156 Identities=17% Similarity=0.138 Sum_probs=131.6
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCC--eEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGF--KVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~ 79 (335)
|++|+||||||||+||++++++|+++|+ +|++++|++....... ..++.++.+|++|++++.++++
T Consensus 16 m~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~-----------~~~~~~~~~D~~d~~~~~~~~~- 83 (242)
T 2bka_A 16 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEA-----------YKNVNQEVVDFEKLDDYASAFQ- 83 (242)
T ss_dssp HTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGG-----------GGGCEEEECCGGGGGGGGGGGS-
T ss_pred hcCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccc-----------cCCceEEecCcCCHHHHHHHhc-
Confidence 3568999999999999999999999999 9999999876543211 1467889999999999999998
Q ss_pred CCCCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccCCCCCCCccCCCCCCCCChhHHh
Q 019795 80 QKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRT 159 (335)
Q Consensus 80 ~~~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~Y~~s 159 (335)
++|+|||+|+..... ..++..+++|+.++.+++++|++.++++||++||.++|+. +.+.|+.+
T Consensus 84 -~~d~vi~~ag~~~~~---~~~~~~~~~n~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~-------------~~~~Y~~s 146 (242)
T 2bka_A 84 -GHDVGFCCLGTTRGK---AGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGADKS-------------SNFLYLQV 146 (242)
T ss_dssp -SCSEEEECCCCCHHH---HHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTT-------------CSSHHHHH
T ss_pred -CCCEEEECCCccccc---CCcccceeeeHHHHHHHHHHHHHCCCCEEEEEccCcCCCC-------------CcchHHHH
Confidence 899999999975432 2356789999999999999999988899999999988742 33589999
Q ss_pred HHHHHHHHHHHHhhCCCC-eEEEEecccccCCC
Q 019795 160 KQWCEEIAFDVQKADPEW-RIILLRYFNPVGAH 191 (335)
Q Consensus 160 K~~~E~~~~~~~~~~~~~-~~~~lR~~~v~G~~ 191 (335)
|..+|.+++.+ ++ +++++||+.+||+.
T Consensus 147 K~~~e~~~~~~-----~~~~~~~vrpg~v~~~~ 174 (242)
T 2bka_A 147 KGEVEAKVEEL-----KFDRYSVFRPGVLLCDR 174 (242)
T ss_dssp HHHHHHHHHTT-----CCSEEEEEECCEEECTT
T ss_pred HHHHHHHHHhc-----CCCCeEEEcCceecCCC
Confidence 99999998653 67 69999999999984
|
| >3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} | Back alignment and structure |
|---|
Probab=99.95 E-value=8.8e-27 Score=208.92 Aligned_cols=224 Identities=14% Similarity=0.156 Sum_probs=164.6
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCC-CCc-hhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcC
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLH-NSV-PEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQ 80 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~-~~~-~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~ 80 (335)
+||+|+||||||+||+++++.|+++|++|++++|+. ... ......+.... ..+++++.+|++|.+++.++++
T Consensus 3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~----~~~v~~v~~D~~d~~~l~~a~~-- 76 (321)
T 3c1o_A 3 HMEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFR----SMGVTIIEGEMEEHEKMVSVLK-- 76 (321)
T ss_dssp -CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHH----HTTCEEEECCTTCHHHHHHHHT--
T ss_pred cccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhh----cCCcEEEEecCCCHHHHHHHHc--
Confidence 467899999999999999999999999999999975 221 11112221111 1578999999999999999998
Q ss_pred CCCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcC-CCEEEEeccccccCCCCCCCccCCCCCCC-CChhHH
Q 019795 81 KFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYN-CKKLVFSSSATIYGQPEKIPCVEDFPYGA-MNPYGR 158 (335)
Q Consensus 81 ~~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~-~~~Y~~ 158 (335)
++|+|||+|+... +.++.+++++|++.+ +++||+ | +||.. .+|+.+..| .+.| .
T Consensus 77 ~~d~vi~~a~~~~---------------~~~~~~l~~aa~~~g~v~~~v~-S---~~g~~----~~~~~~~~p~~~~y-~ 132 (321)
T 3c1o_A 77 QVDIVISALPFPM---------------ISSQIHIINAIKAAGNIKRFLP-S---DFGCE----EDRIKPLPPFESVL-E 132 (321)
T ss_dssp TCSEEEECCCGGG---------------SGGGHHHHHHHHHHCCCCEEEC-S---CCSSC----GGGCCCCHHHHHHH-H
T ss_pred CCCEEEECCCccc---------------hhhHHHHHHHHHHhCCccEEec-c---ccccC----ccccccCCCcchHH-H
Confidence 7999999998632 456778999999998 999983 3 45432 123333333 4569 9
Q ss_pred hHHHHHHHHHHHHhhCCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHH---HhCCCCceeEecccCCCCCCc
Q 019795 159 TKQWCEEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQV---AVGRHPELNVYGQDYPTKDGS 235 (335)
Q Consensus 159 sK~~~E~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~---~~~~~~~~~~~g~~~~~~~~~ 235 (335)
+|..+|++++.. +++++++||+.+++. +.+.+... ...... +.+++ +++
T Consensus 133 sK~~~e~~~~~~-----~~~~~~lrp~~~~~~----------------~~~~~~~~~~~~~~~~~-~~~~~------~~~ 184 (321)
T 3c1o_A 133 KKRIIRRAIEAA-----ALPYTYVSANCFGAY----------------FVNYLLHPSPHPNRNDD-IVIYG------TGE 184 (321)
T ss_dssp HHHHHHHHHHHH-----TCCBEEEECCEEHHH----------------HHHHHHCCCSSCCTTSC-EEEET------TSC
T ss_pred HHHHHHHHHHHc-----CCCeEEEEeceeccc----------------cccccccccccccccCc-eEEec------CCC
Confidence 999999998643 889999999887774 22222110 011122 56666 678
Q ss_pred eeeeeeeHhhhhc-----------cCceEEecC-CccccHHHHHHHHHHHhCCCCCceeCC
Q 019795 236 AVRDYIHVMDLAD-----------GCIAYNLGN-GKGISVLEMVAAFEKASGKKIPIKFCP 284 (335)
Q Consensus 236 ~~~~~v~~~D~~~-----------~~~~~nv~~-~~~~s~~el~~~i~~~~g~~~~~~~~~ 284 (335)
..++|+|++|+++ .+++|++.+ ++.+|+.|+++.+.+.+|.+..+...+
T Consensus 185 ~~~~~i~~~Dva~~~~~~l~~~~~~g~~~~~~g~~~~~t~~e~~~~~~~~~g~~~~~~~~~ 245 (321)
T 3c1o_A 185 TKFVLNYEEDIAKYTIKVACDPRCCNRIVIYRPPKNIISQNELISLWEAKSGLSFKKVHMP 245 (321)
T ss_dssp CEEEEECHHHHHHHHHHHHHCGGGTTEEEECCCGGGEEEHHHHHHHHHHHHTSCCCEEEEC
T ss_pred cceeEeeHHHHHHHHHHHHhCccccCeEEEEeCCCCcccHHHHHHHHHHHcCCcceeeeCC
Confidence 8899999999987 367788875 579999999999999999887665543
|
| >2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=2.1e-26 Score=202.21 Aligned_cols=233 Identities=16% Similarity=0.196 Sum_probs=170.5
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
+++|+||||||+|+||++++++|+++|++|++++|+........+.+. . ..++.++.+|++|++++.++++.
T Consensus 14 l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~---~---~~~~~~~~~D~~~~~~~~~~~~~~~ 87 (278)
T 2bgk_A 14 LQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIG---S---PDVISFVHCDVTKDEDVRNLVDTTI 87 (278)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC---C---TTTEEEEECCTTCHHHHHHHHHHHH
T ss_pred ccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhC---C---CCceEEEECCCCCHHHHHHHHHHHH
Confidence 457899999999999999999999999999999986433222222221 1 13688999999999999988874
Q ss_pred ---CCCCEEEEcccccch------hhhhcChHHHHHHhHHHHHHHHHHHHHc----CCCEEEEeccccccCCCCCCCccC
Q 019795 80 ---QKFEAVIHFGALKAV------AESVQHPFRYFDNNLIGTINLYQAMAKY----NCKKLVFSSSATIYGQPEKIPCVE 146 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~~------~~~~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~~v~~Ss~~vyg~~~~~~~~e 146 (335)
.++|+|||+||.... ..+.++++..+++|+.++.++++++... +.++||++||...|...
T Consensus 88 ~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~------- 160 (278)
T 2bgk_A 88 AKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAG------- 160 (278)
T ss_dssp HHHSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCC-------
T ss_pred HHcCCCCEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCeEEEEeeccccCCC-------
Confidence 379999999997421 1233566789999999999999987653 56799999998877421
Q ss_pred CCCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHHHhCCCCceeE
Q 019795 147 DFPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNV 224 (335)
Q Consensus 147 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (335)
..+...|+.+|...|.+++.++.+. .+++++++||+.++++...... ............. .+
T Consensus 161 ---~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~--------~~~~~~~~~~~~~-~~---- 224 (278)
T 2bgk_A 161 ---EGVSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVF--------GVDSSRVEELAHQ-AA---- 224 (278)
T ss_dssp ---TTSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSS--------SCCHHHHHHHHHH-TC----
T ss_pred ---CCCCcchHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeceecchhhhhhc--------ccchhHHHHhhhc-cc----
Confidence 1245689999999999999888662 2899999999999998432111 0011122221111 11
Q ss_pred ecccCCCCCCceeeeeeeHhhhhc-------------cCceEEecCCccccHHHHHHHHHHH
Q 019795 225 YGQDYPTKDGSAVRDYIHVMDLAD-------------GCIAYNLGNGKGISVLEMVAAFEKA 273 (335)
Q Consensus 225 ~g~~~~~~~~~~~~~~v~~~D~~~-------------~~~~~nv~~~~~~s~~el~~~i~~~ 273 (335)
.....+++++|+++ .+++|++.++..+++.|+++.+.+.
T Consensus 225 ----------~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~e~~~~i~~~ 276 (278)
T 2bgk_A 225 ----------NLKGTLLRAEDVADAVAYLAGDESKYVSGLNLVIDGGYTRTNPAFPTALKHG 276 (278)
T ss_dssp ----------SSCSCCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGCCTHHHHHSCSC
T ss_pred ----------ccccccCCHHHHHHHHHHHcCcccccCCCCEEEECCcccccCCccchhhhhh
Confidence 11245789999887 3789999999999999999887654
|
| >1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=4.7e-26 Score=190.82 Aligned_cols=153 Identities=20% Similarity=0.221 Sum_probs=125.6
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCC
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKF 82 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~ 82 (335)
++|+|+||||||+||++++++|+++|++|++++|++...... ...++.++.+|++|++++.++++ ++
T Consensus 2 ~~~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~-----------~~~~~~~~~~D~~~~~~~~~~~~--~~ 68 (206)
T 1hdo_A 2 AVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSE-----------GPRPAHVVVGDVLQAADVDKTVA--GQ 68 (206)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSS-----------SCCCSEEEESCTTSHHHHHHHHT--TC
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhcccc-----------cCCceEEEEecCCCHHHHHHHHc--CC
Confidence 347999999999999999999999999999999975432211 02578999999999999999998 78
Q ss_pred CEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccCCCCCCCccCCCCCCCCChhHHhHHH
Q 019795 83 EAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQW 162 (335)
Q Consensus 83 d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~Y~~sK~~ 162 (335)
|+|||+|+.... .+ ..++|+.++.+++++|++.+++++|++||.++|+.....+ .+...|+.+|..
T Consensus 69 d~vi~~a~~~~~----~~---~~~~n~~~~~~~~~~~~~~~~~~~v~~Ss~~~~~~~~~~~-------~~~~~y~~~K~~ 134 (206)
T 1hdo_A 69 DAVIVLLGTRND----LS---PTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTKVP-------PRLQAVTDDHIR 134 (206)
T ss_dssp SEEEECCCCTTC----CS---CCCHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCTTCSC-------GGGHHHHHHHHH
T ss_pred CEEEECccCCCC----CC---ccchHHHHHHHHHHHHHHhCCCeEEEEeeeeeccCccccc-------ccchhHHHHHHH
Confidence 999999997432 11 1348999999999999999999999999999987543211 155689999999
Q ss_pred HHHHHHHHHhhCCCCeEEEEecccc
Q 019795 163 CEEIAFDVQKADPEWRIILLRYFNP 187 (335)
Q Consensus 163 ~E~~~~~~~~~~~~~~~~~lR~~~v 187 (335)
+|++++. . +++++++||+.+
T Consensus 135 ~e~~~~~----~-~i~~~~lrp~~~ 154 (206)
T 1hdo_A 135 MHKVLRE----S-GLKYVAVMPPHI 154 (206)
T ss_dssp HHHHHHH----T-CSEEEEECCSEE
T ss_pred HHHHHHh----C-CCCEEEEeCCcc
Confidence 9999853 3 899999999997
|
| >2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} | Back alignment and structure |
|---|
Probab=99.94 E-value=6.3e-26 Score=201.99 Aligned_cols=227 Identities=16% Similarity=0.195 Sum_probs=163.9
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCC-c-h-hhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNS-V-P-EAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS 79 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~-~-~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~ 79 (335)
+||+|+||||||+||++++++|+++|++|++++|+... . . .....+..+. ..+++++.+|++|.+++.++++
T Consensus 1 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~l~----~~~v~~v~~D~~d~~~l~~~~~- 75 (307)
T 2gas_A 1 TENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQ----SLGVILLEGDINDHETLVKAIK- 75 (307)
T ss_dssp CCCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHHHHHH----HTTCEEEECCTTCHHHHHHHHT-
T ss_pred CCcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHHHHHH----hCCCEEEEeCCCCHHHHHHHHh-
Confidence 46789999999999999999999999999999997521 1 1 1111121111 1568899999999999999998
Q ss_pred CCCCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcC-CCEEEEeccccccCCCCCCCccCCCCCCC-CChhH
Q 019795 80 QKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYN-CKKLVFSSSATIYGQPEKIPCVEDFPYGA-MNPYG 157 (335)
Q Consensus 80 ~~~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~-~~~Y~ 157 (335)
++|+|||+|+... +.++.+++++|++.+ +++||+ | +||... +|..+..| .+.|
T Consensus 76 -~~d~vi~~a~~~~---------------~~~~~~l~~aa~~~g~v~~~v~-S---~~g~~~----~~~~~~~p~~~~y- 130 (307)
T 2gas_A 76 -QVDIVICAAGRLL---------------IEDQVKIIKAIKEAGNVKKFFP-S---EFGLDV----DRHDAVEPVRQVF- 130 (307)
T ss_dssp -TCSEEEECSSSSC---------------GGGHHHHHHHHHHHCCCSEEEC-S---CCSSCT----TSCCCCTTHHHHH-
T ss_pred -CCCEEEECCcccc---------------cccHHHHHHHHHhcCCceEEee-c---ccccCc----ccccCCCcchhHH-
Confidence 8999999998742 445778999999998 999983 3 455321 22333344 3568
Q ss_pred HhHHHHHHHHHHHHhhCCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHHHhCCCCceeEecccCCCCCCcee
Q 019795 158 RTKQWCEEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAV 237 (335)
Q Consensus 158 ~sK~~~E~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 237 (335)
.+|..+|++++.. +++++++||+.+++....... . .... .... ..+.++| +++..
T Consensus 131 ~sK~~~e~~~~~~-----~i~~~~lrp~~~~~~~~~~~~--------~----~~~~-~~~~-~~~~~~~------~~~~~ 185 (307)
T 2gas_A 131 EEKASIRRVIEAE-----GVPYTYLCCHAFTGYFLRNLA--------Q----LDAT-DPPR-DKVVILG------DGNVK 185 (307)
T ss_dssp HHHHHHHHHHHHH-----TCCBEEEECCEETTTTGGGTT--------C----TTCS-SCCS-SEEEEET------TSCSE
T ss_pred HHHHHHHHHHHHc-----CCCeEEEEcceeecccccccc--------c----cccc-cCCC-CeEEEec------CCCcc
Confidence 9999999988643 899999999988875311100 0 0000 0011 1256666 67888
Q ss_pred eeeeeHhhhhc-----------cCceEEecC-CccccHHHHHHHHHHHhCCCCCceeCC
Q 019795 238 RDYIHVMDLAD-----------GCIAYNLGN-GKGISVLEMVAAFEKASGKKIPIKFCP 284 (335)
Q Consensus 238 ~~~v~~~D~~~-----------~~~~~nv~~-~~~~s~~el~~~i~~~~g~~~~~~~~~ 284 (335)
++|+|++|+++ .++.|++.+ ++.+|+.|+++.+.+.+|.+.++...+
T Consensus 186 ~~~i~~~Dva~~~~~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~~~~~ 244 (307)
T 2gas_A 186 GAYVTEADVGTFTIRAANDPNTLNKAVHIRLPKNYLTQNEVIALWEKKIGKTLEKTYVS 244 (307)
T ss_dssp EEEECHHHHHHHHHHHHTCGGGTTEEEECCCGGGEEEHHHHHHHHHHHHTSCCEEEEEC
T ss_pred eEEeeHHHHHHHHHHHHcCccccCceEEEeCCCCcCCHHHHHHHHHHHhCCCCceeecC
Confidence 99999999987 366788765 468999999999999999887665443
|
| >1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=4.3e-26 Score=197.68 Aligned_cols=219 Identities=16% Similarity=0.158 Sum_probs=162.0
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
+++|+||||||+|+||+++++.|+++|++|++++|+........+.+... ..++.++.+|++|++++.++++.
T Consensus 9 ~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~ 83 (255)
T 1fmc_A 9 LDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQL-----GGQAFACRCDITSEQELSALADFAI 83 (255)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHT-----TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHh-----CCceEEEEcCCCCHHHHHHHHHHHH
Confidence 45789999999999999999999999999999999754443333333321 14688899999999999988864
Q ss_pred ---CCCCEEEEcccccch---hhhhcChHHHHHHhHHHHHHHHHHHH----HcCCCEEEEeccccccCCCCCCCccCCCC
Q 019795 80 ---QKFEAVIHFGALKAV---AESVQHPFRYFDNNLIGTINLYQAMA----KYNCKKLVFSSSATIYGQPEKIPCVEDFP 149 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~~---~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~ 149 (335)
.++|+|||+|+.... ..+.++++..+++|+.++.++++++. +.+.++||++||...+. +
T Consensus 84 ~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~-----------~ 152 (255)
T 1fmc_A 84 SKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAEN-----------K 152 (255)
T ss_dssp HHHSSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTC-----------C
T ss_pred HhcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcC-----------C
Confidence 379999999997432 22345677899999999999999875 44667999999988763 2
Q ss_pred CCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHHHhCCCCceeEecc
Q 019795 150 YGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQ 227 (335)
Q Consensus 150 ~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 227 (335)
..+...|+.+|...|.+++.++.+. .++++.++||+.++++.... .+.+.+........+
T Consensus 153 ~~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~Pg~v~t~~~~~-----------~~~~~~~~~~~~~~~------- 214 (255)
T 1fmc_A 153 NINMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKS-----------VITPEIEQKMLQHTP------- 214 (255)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHT-----------TCCHHHHHHHHHTCS-------
T ss_pred CCCCcccHHHHHHHHHHHHHHHHHhhhcCcEEEEEecccCcchhhhh-----------ccChHHHHHHHhcCC-------
Confidence 3455689999999999999887663 38999999999999873110 011222221211222
Q ss_pred cCCCCCCceeeeeeeHhhhhc-------------cCceEEecCCccccH
Q 019795 228 DYPTKDGSAVRDYIHVMDLAD-------------GCIAYNLGNGKGISV 263 (335)
Q Consensus 228 ~~~~~~~~~~~~~v~~~D~~~-------------~~~~~nv~~~~~~s~ 263 (335)
...+.+++|+++ .+++||+.+|..+|+
T Consensus 215 ---------~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~s~ 254 (255)
T 1fmc_A 215 ---------IRRLGQPQDIANAALFLCSPAASWVSGQILTVSGGGVQEL 254 (255)
T ss_dssp ---------SCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSCCCC
T ss_pred ---------cccCCCHHHHHHHHHHHhCCccccCCCcEEEECCceeccC
Confidence 134678899886 367999998887764
|
| >3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=99.94 E-value=1.2e-26 Score=204.25 Aligned_cols=238 Identities=18% Similarity=0.173 Sum_probs=175.4
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
+++|+||||||+|+||+++++.|+++|++|++++|+........+.+..... ....+.++.+|++|++++.++++.
T Consensus 9 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~~~Dv~~~~~v~~~~~~~~ 86 (281)
T 3svt_A 9 FQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGA--NGGAIRYEPTDITNEDETARAVDAVT 86 (281)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCC--SSCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCC--CCceEEEEeCCCCCHHHHHHHHHHHH
Confidence 3568999999999999999999999999999999976655555555543321 113788999999999999988875
Q ss_pred ---CCCCEEEEccccc-----chhhhhcChHHHHHHhHHHHHHHHHHHHH----cCCCEEEEeccccccCCCCCCCccCC
Q 019795 80 ---QKFEAVIHFGALK-----AVAESVQHPFRYFDNNLIGTINLYQAMAK----YNCKKLVFSSSATIYGQPEKIPCVED 147 (335)
Q Consensus 80 ---~~~d~vi~~a~~~-----~~~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~v~~Ss~~vyg~~~~~~~~e~ 147 (335)
.++|++||+||.. ....+.++++..+++|+.++.++++++.. .+..+||++||...+.
T Consensus 87 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~---------- 156 (281)
T 3svt_A 87 AWHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAASN---------- 156 (281)
T ss_dssp HHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHS----------
T ss_pred HHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEeCHHHcC----------
Confidence 3799999999972 22334566778999999999999998654 3345999999987762
Q ss_pred CCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHHHhCCCCceeEe
Q 019795 148 FPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVY 225 (335)
Q Consensus 148 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (335)
+..+...|+.||...+.+++.++.++ .++++.+++|+.|+++-.... . ........... ..
T Consensus 157 -~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~--------~-~~~~~~~~~~~-~~------ 219 (281)
T 3svt_A 157 -THRWFGAYGVTKSAVDHLMQLAADELGASWVRVNSIRPGLIRTDLVAAI--------T-ESAELSSDYAM-CT------ 219 (281)
T ss_dssp -CCTTCTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHH--------H-TCHHHHHHHHH-HC------
T ss_pred -CCCCChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhc--------c-cCHHHHHHHHh-cC------
Confidence 33445789999999999999988774 268999999999987621100 0 00011111111 11
Q ss_pred cccCCCCCCceeeeeeeHhhhhc-------------cCceEEecCCcccc-HHHHHHHHHHHhCCCC
Q 019795 226 GQDYPTKDGSAVRDYIHVMDLAD-------------GCIAYNLGNGKGIS-VLEMVAAFEKASGKKI 278 (335)
Q Consensus 226 g~~~~~~~~~~~~~~v~~~D~~~-------------~~~~~nv~~~~~~s-~~el~~~i~~~~g~~~ 278 (335)
....+.+++|+++ .+++|++.+|..++ ..++.+.+.+.++.+.
T Consensus 220 ----------p~~r~~~~~dva~~~~~l~s~~~~~itG~~~~vdgG~~~~~~~~~~~~~~~~~~~~~ 276 (281)
T 3svt_A 220 ----------PLPRQGEVEDVANMAMFLLSDAASFVTGQVINVDGGQMLRRGPDFSAMLEPVFGRDA 276 (281)
T ss_dssp ----------SSSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGSCCCCCHHHHHHHHCTTG
T ss_pred ----------CCCCCCCHHHHHHHHHHHhCcccCCCCCCEEEeCCChhcccCCcchhccccccCCcc
Confidence 1234567888876 48899998888777 7888999999888653
|
| >1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=3.8e-26 Score=203.07 Aligned_cols=234 Identities=16% Similarity=0.135 Sum_probs=169.8
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
+++|+||||||+|+||+++++.|+++|++|++++|+........+.+....+ .++.++.+|++|.+++.++++.
T Consensus 24 l~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~----~~~~~~~~Dl~~~~~~~~~~~~~~ 99 (302)
T 1w6u_A 24 FQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTG----NKVHAIQCDVRDPDMVQNTVSELI 99 (302)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHS----SCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcC----CceEEEEeCCCCHHHHHHHHHHHH
Confidence 4568999999999999999999999999999999976544444444432212 5689999999999999888774
Q ss_pred ---CCCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHHHH-----cCCCEEEEeccccccCCCCCCCccCC
Q 019795 80 ---QKFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAMAK-----YNCKKLVFSSSATIYGQPEKIPCVED 147 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~-----~~~~~~v~~Ss~~vyg~~~~~~~~e~ 147 (335)
.++|+|||+||.... ..+.++++..+++|+.++.++++++.. .+.+++|++||...+.
T Consensus 100 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~---------- 169 (302)
T 1w6u_A 100 KVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAET---------- 169 (302)
T ss_dssp HHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHH----------
T ss_pred HHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEccccccc----------
Confidence 278999999996432 234456778999999999999988753 2346999999977652
Q ss_pred CCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHHHhCCCCceeEe
Q 019795 148 FPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVY 225 (335)
Q Consensus 148 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (335)
+..+...|+.+|...|.+++.++.+. .++++.++||+.++++...... ..... ..... ....+
T Consensus 170 -~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~------~~~~~--~~~~~-~~~~p----- 234 (302)
T 1w6u_A 170 -GSGFVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRL------DPTGT--FEKEM-IGRIP----- 234 (302)
T ss_dssp -CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------C------CTTSH--HHHHH-HTTCT-----
T ss_pred -CCCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeccCCCcchhhhc------ccchh--hHHHH-HhcCC-----
Confidence 23455689999999999999888772 2899999999999887321000 01111 11111 12221
Q ss_pred cccCCCCCCceeeeeeeHhhhhc-------------cCceEEecCCccccHHHHHHHHHHHhC
Q 019795 226 GQDYPTKDGSAVRDYIHVMDLAD-------------GCIAYNLGNGKGISVLEMVAAFEKASG 275 (335)
Q Consensus 226 g~~~~~~~~~~~~~~v~~~D~~~-------------~~~~~nv~~~~~~s~~el~~~i~~~~g 275 (335)
...+.+++|+++ .+++|++.+|..+++.++++.+.+..|
T Consensus 235 -----------~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~~~~~~~~~~~g 286 (302)
T 1w6u_A 235 -----------CGRLGTVEELANLAAFLCSDYASWINGAVIKFDGGEEVLISGEFNDLRKVTK 286 (302)
T ss_dssp -----------TSSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTHHHHHHSTTGGGGGCCH
T ss_pred -----------cCCCCCHHHHHHHHHHHcCCcccccCCCEEEECCCeeeccCCccccchhhcc
Confidence 124678889886 377999999988998888887776655
|
| >3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=2.2e-25 Score=192.31 Aligned_cols=174 Identities=17% Similarity=0.120 Sum_probs=138.5
Q ss_pred CCCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCC-CchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc
Q 019795 1 MASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHN-SVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS 79 (335)
Q Consensus 1 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~ 79 (335)
|+++|++|||||+|+||++++++|+++|++|++++++.. ......+.+... ..++.++.+|++|++++++++++
T Consensus 1 Ml~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~Dv~d~~~v~~~~~~ 75 (246)
T 3osu_A 1 MKMTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAK-----GVDSFAIQANVADADEVKAMIKE 75 (246)
T ss_dssp CCCSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT-----TSCEEEEECCTTCHHHHHHHHHH
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc-----CCcEEEEEccCCCHHHHHHHHHH
Confidence 888999999999999999999999999999999887542 222333333321 25688999999999999988875
Q ss_pred -----CCCCEEEEcccccc----hhhhhcChHHHHHHhHHHHHHHHHHH----HHcCCCEEEEeccccccCCCCCCCccC
Q 019795 80 -----QKFEAVIHFGALKA----VAESVQHPFRYFDNNLIGTINLYQAM----AKYNCKKLVFSSSATIYGQPEKIPCVE 146 (335)
Q Consensus 80 -----~~~d~vi~~a~~~~----~~~~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~v~~Ss~~vyg~~~~~~~~e 146 (335)
.++|++||+||... ...+.++++..+++|+.++.++++++ ++.+.++||++||...+.
T Consensus 76 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--------- 146 (246)
T 3osu_A 76 VVSQFGSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAV--------- 146 (246)
T ss_dssp HHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHH---------
T ss_pred HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcC---------
Confidence 38999999999753 22345667789999999999999997 445667999999976542
Q ss_pred CCCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 147 DFPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 147 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
+..+...|+.||...+.+++.++.++ .++++.+++|+.+.++
T Consensus 147 --~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~ 190 (246)
T 3osu_A 147 --GNPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSD 190 (246)
T ss_dssp --CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGG
T ss_pred --CCCCChHHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECCCcCC
Confidence 23345689999999999999888753 2799999999999886
|
| >1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.93 E-value=1.4e-25 Score=193.19 Aligned_cols=169 Identities=19% Similarity=0.125 Sum_probs=134.5
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcC-
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQ- 80 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~- 80 (335)
+++|+||||||+|+||++++++|+++|++|++++|+.......... . .++.++.+|++|+++++++++..
T Consensus 5 ~~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~---~------~~~~~~~~D~~~~~~~~~~~~~~~ 75 (244)
T 1cyd_A 5 FSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKE---C------PGIEPVCVDLGDWDATEKALGGIG 75 (244)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH---S------TTCEEEECCTTCHHHHHHHHTTCC
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh---c------cCCCcEEecCCCHHHHHHHHHHcC
Confidence 5678999999999999999999999999999999864332221111 1 35677899999999999999853
Q ss_pred CCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHHHHc----C-CCEEEEeccccccCCCCCCCccCCCCCC
Q 019795 81 KFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAMAKY----N-CKKLVFSSSATIYGQPEKIPCVEDFPYG 151 (335)
Q Consensus 81 ~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~~----~-~~~~v~~Ss~~vyg~~~~~~~~e~~~~~ 151 (335)
++|+|||+|+.... ..+.++++..+++|+.++.++++++... + .++||++||...|.. ..
T Consensus 76 ~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~-----------~~ 144 (244)
T 1cyd_A 76 PVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVT-----------FP 144 (244)
T ss_dssp CCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSC-----------CT
T ss_pred CCCEEEECCcccCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcchhhcCC-----------CC
Confidence 68999999996432 2234566789999999999999987653 4 579999999887642 23
Q ss_pred CCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 152 AMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 152 ~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
+...|+.+|...|.+++.++.+. .++++.++||+.++++
T Consensus 145 ~~~~Y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~ 185 (244)
T 1cyd_A 145 NLITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTD 185 (244)
T ss_dssp TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTH
T ss_pred CcchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCc
Confidence 45689999999999999888763 2899999999999987
|
| >4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A | Back alignment and structure |
|---|
Probab=99.93 E-value=7.9e-26 Score=196.62 Aligned_cols=223 Identities=18% Similarity=0.132 Sum_probs=160.3
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc---
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS--- 79 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~--- 79 (335)
++|++|||||+|+||++++++|+++|++|++++|+........+.+ ...+.++.+|++|++++.++++.
T Consensus 7 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~--------~~~~~~~~~D~~~~~~v~~~~~~~~~ 78 (259)
T 4e6p_A 7 EGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEI--------GPAAYAVQMDVTRQDSIDAAIAATVE 78 (259)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH--------CTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh--------CCCceEEEeeCCCHHHHHHHHHHHHH
Confidence 4589999999999999999999999999999998654433333322 15678999999999999888875
Q ss_pred --CCCCEEEEcccccc----hhhhhcChHHHHHHhHHHHHHHHHHHHHc----C-CCEEEEeccccccCCCCCCCccCCC
Q 019795 80 --QKFEAVIHFGALKA----VAESVQHPFRYFDNNLIGTINLYQAMAKY----N-CKKLVFSSSATIYGQPEKIPCVEDF 148 (335)
Q Consensus 80 --~~~d~vi~~a~~~~----~~~~~~~~~~~~~~nv~~~~~l~~~~~~~----~-~~~~v~~Ss~~vyg~~~~~~~~e~~ 148 (335)
.++|+|||+||... ...+.++++..+++|+.++.++++++... + ..+||++||...+.
T Consensus 79 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~----------- 147 (259)
T 4e6p_A 79 HAGGLDILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAGRR----------- 147 (259)
T ss_dssp HSSSCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTS-----------
T ss_pred HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhhcc-----------
Confidence 37999999999743 22345677789999999999999987543 2 35899999977652
Q ss_pred CCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHHHhCCCCc-eeEe
Q 019795 149 PYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPE-LNVY 225 (335)
Q Consensus 149 ~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 225 (335)
+..+...|+.||...+.+++.++.++ .++++.+++|+.|+++... .....+.......... ....
T Consensus 148 ~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~------------~~~~~~~~~~~~~~~~~~~~~ 215 (259)
T 4e6p_A 148 GEALVAIYCATKAAVISLTQSAGLDLIKHRINVNAIAPGVVDGEHWD------------GVDALFARYENRPRGEKKRLV 215 (259)
T ss_dssp CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTHH------------HHHHHHHHHHTCCTTHHHHHH
T ss_pred CCCCChHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEECCCccchhh------------hhhhhhhhhccCChHHHHHHH
Confidence 23345689999999999999888763 2799999999999887311 0111111111110000 1111
Q ss_pred cccCCCCCCceeeeeeeHhhhhc-------------cCceEEecCCcccc
Q 019795 226 GQDYPTKDGSAVRDYIHVMDLAD-------------GCIAYNLGNGKGIS 262 (335)
Q Consensus 226 g~~~~~~~~~~~~~~v~~~D~~~-------------~~~~~nv~~~~~~s 262 (335)
+ +..+.+.+.+++|+++ .+++|++.+|..+|
T Consensus 216 ~------~~~p~~r~~~~~dva~~v~~L~s~~~~~itG~~i~vdgG~~~s 259 (259)
T 4e6p_A 216 G------EAVPFGRMGTAEDLTGMAIFLASAESDYIVSQTYNVDGGNWMS 259 (259)
T ss_dssp H------HHSTTSSCBCTHHHHHHHHHTTSGGGTTCCSCEEEESTTSSCC
T ss_pred h------ccCCCCCCcCHHHHHHHHHHHhCCccCCCCCCEEEECcChhcC
Confidence 1 2234467889999987 37899998886654
|
| >2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} | Back alignment and structure |
|---|
Probab=99.93 E-value=1.7e-26 Score=199.99 Aligned_cols=215 Identities=13% Similarity=0.028 Sum_probs=154.8
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcC--C
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQ--K 81 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~--~ 81 (335)
||+||||||+||||++++++|+++|++|++++|+..... . .+.+|++|.++++++++.. +
T Consensus 1 Mk~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~---------------~---~~~~D~~~~~~~~~~~~~~~~~ 62 (255)
T 2dkn_A 1 MSVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIE---------------A---DLSTPGGRETAVAAVLDRCGGV 62 (255)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEE---------------C---CTTSHHHHHHHHHHHHHHHTTC
T ss_pred CcEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHcc---------------c---cccCCcccHHHHHHHHHHcCCC
Confidence 579999999999999999999999999999999755321 1 1568999999999888643 7
Q ss_pred CCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHc----CCCEEEEeccccccCCCCCC-Ccc-------CCC-
Q 019795 82 FEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKY----NCKKLVFSSSATIYGQPEKI-PCV-------EDF- 148 (335)
Q Consensus 82 ~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~~v~~Ss~~vyg~~~~~-~~~-------e~~- 148 (335)
+|+|||+|+.... ...++..+++|+.++.++++++.+. +.+++|++||..+|+..... +.. |+.
T Consensus 63 ~d~vi~~Ag~~~~---~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (255)
T 2dkn_A 63 LDGLVCCAGVGVT---AANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQPGAAELPMVEAMLAGDEARA 139 (255)
T ss_dssp CSEEEECCCCCTT---SSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSTTGGGCHHHHHHHHTCHHHH
T ss_pred ccEEEECCCCCCc---chhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEeccccccccccccchhhhhcccchhhh
Confidence 9999999997531 3457789999999999999987654 55799999999988643111 110 110
Q ss_pred ------CCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHHHhCCCC
Q 019795 149 ------PYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHP 220 (335)
Q Consensus 149 ------~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 220 (335)
+..+.+.|+.+|.+.|.+++.++.+. .+++++++||+.++|+. ...+.. .....
T Consensus 140 ~~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~~~~----------------~~~~~~--~~~~~ 201 (255)
T 2dkn_A 140 IELAEQQGQTHLAYAGSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVETPL----------------LQASKA--DPRYG 201 (255)
T ss_dssp HHHHHHHCCHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECCBCSHH----------------HHHHHH--CTTTH
T ss_pred hhhccccCCcchhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEcCCcccchh----------------hhhccc--chhhH
Confidence 11345689999999999999887661 28999999999999872 111100 00000
Q ss_pred c-eeEecccCCCCCCceeeeeeeHhhhhc-------------cCceEEecCCccccHHH
Q 019795 221 E-LNVYGQDYPTKDGSAVRDYIHVMDLAD-------------GCIAYNLGNGKGISVLE 265 (335)
Q Consensus 221 ~-~~~~g~~~~~~~~~~~~~~v~~~D~~~-------------~~~~~nv~~~~~~s~~e 265 (335)
. .... .+ ..+.|++++|+++ .+++||+.++..++++|
T Consensus 202 ~~~~~~-------~~-~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~e 252 (255)
T 2dkn_A 202 ESTRRF-------VA-PLGRGSEPREVAEAIAFLLGPQASFIHGSVLFVDGGMDALMRA 252 (255)
T ss_dssp HHHHSC-------CC-TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTHHHHHCT
T ss_pred HHHHHH-------HH-HhcCCCCHHHHHHHHHHHhCCCcccceeeEEEecCCeEeeeec
Confidence 0 0000 01 3457899999987 36799999888777654
|
| >1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.93 E-value=6.5e-25 Score=192.85 Aligned_cols=240 Identities=14% Similarity=0.090 Sum_probs=156.3
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
+++|++|||||+|+||+++++.|+++|++|++++|+........+.+..... ...++.++.+|++|++++.++++.
T Consensus 4 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~ 81 (278)
T 1spx_A 4 FAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGV--SEQNVNSVVADVTTDAGQDEILSTTL 81 (278)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC--CGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccc--CCCceeEEecccCCHHHHHHHHHHHH
Confidence 5678999999999999999999999999999999975444333333311011 124688999999999999888874
Q ss_pred ---CCCCEEEEcccccchh----h----hhcChHHHHHHhHHHHHHHHHHHHHc----CCCEEEEeccccc-cCCCCCCC
Q 019795 80 ---QKFEAVIHFGALKAVA----E----SVQHPFRYFDNNLIGTINLYQAMAKY----NCKKLVFSSSATI-YGQPEKIP 143 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~~~----~----~~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~~v~~Ss~~v-yg~~~~~~ 143 (335)
.++|+|||+||..... . +.++++..+++|+.++.++++++... + ++||++||... +.
T Consensus 82 ~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-g~iv~isS~~~~~~------ 154 (278)
T 1spx_A 82 GKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK-GEIVNISSIASGLH------ 154 (278)
T ss_dssp HHHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTTSSSS------
T ss_pred HHcCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEeccccccc------
Confidence 3799999999974321 1 45567789999999999999987653 5 79999999765 42
Q ss_pred ccCCCCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHHHhCCCCc
Q 019795 144 CVEDFPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPE 221 (335)
Q Consensus 144 ~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 221 (335)
+..+...|+.||...+.+++.++.+. .++++.++||+.++++....... .... ...+......... ..|
T Consensus 155 -----~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~-~~~~-~~~~~~~~~~~~~-~~p- 225 (278)
T 1spx_A 155 -----ATPDFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGM-PEET-SKKFYSTMATMKE-CVP- 225 (278)
T ss_dssp -----CCTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC----------------HHHHHHHHH-HCT-
T ss_pred -----CCCCccHHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccCcccccccc-Cchh-hhhhhHHHHHHHh-cCC-
Confidence 22344579999999999999887652 28999999999998873211000 0000 0001111111111 111
Q ss_pred eeEecccCCCCCCceeeeeeeHhhhhc--------------cCceEEecCCccccHHHHHHHHHHHh
Q 019795 222 LNVYGQDYPTKDGSAVRDYIHVMDLAD--------------GCIAYNLGNGKGISVLEMVAAFEKAS 274 (335)
Q Consensus 222 ~~~~g~~~~~~~~~~~~~~v~~~D~~~--------------~~~~~nv~~~~~~s~~el~~~i~~~~ 274 (335)
...+.+.+|+++ .+++|++.+|..+++.|+++.+.+.+
T Consensus 226 ---------------~~~~~~~~dvA~~v~~l~s~~~~~~~tG~~~~vdgG~~~~~~~~~~~~~~~~ 277 (278)
T 1spx_A 226 ---------------AGVMGQPQDIAEVIAFLADRKTSSYIIGHQLVVDGGSSLIMGLHCQDFAKLL 277 (278)
T ss_dssp ---------------TSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGGC------------
T ss_pred ---------------CcCCCCHHHHHHHHHHHcCccccCcccCcEEEECCCcccccCcccccHHHHh
Confidence 123678888876 27899999899999999999988754
|
| >3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=5.3e-25 Score=189.63 Aligned_cols=170 Identities=18% Similarity=0.131 Sum_probs=134.0
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcC-
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQ- 80 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~- 80 (335)
+++|+||||||+|+||++++++|+++|++|++++|+........+.+ .++.++.+|++|++++.++++..
T Consensus 5 l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---------~~~~~~~~D~~~~~~~~~~~~~~~ 75 (244)
T 3d3w_A 5 LAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVREC---------PGIEPVCVDLGDWEATERALGSVG 75 (244)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS---------TTCEEEECCTTCHHHHHHHHTTCC
T ss_pred cCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc---------CCCCEEEEeCCCHHHHHHHHHHcC
Confidence 34689999999999999999999999999999998643322221111 24567899999999999999753
Q ss_pred CCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHHHHc----C-CCEEEEeccccccCCCCCCCccCCCCCC
Q 019795 81 KFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAMAKY----N-CKKLVFSSSATIYGQPEKIPCVEDFPYG 151 (335)
Q Consensus 81 ~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~~----~-~~~~v~~Ss~~vyg~~~~~~~~e~~~~~ 151 (335)
++|+|||+||.... ..+.+.++..+++|+.++.++++++... + .++||++||...+. +..
T Consensus 76 ~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~-----------~~~ 144 (244)
T 3d3w_A 76 PVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQR-----------AVT 144 (244)
T ss_dssp CCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTS-----------CCT
T ss_pred CCCEEEECCccCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCchhhcc-----------CCC
Confidence 68999999997432 1234566789999999999999987543 4 57999999987653 233
Q ss_pred CCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCCC
Q 019795 152 AMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGAH 191 (335)
Q Consensus 152 ~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~~ 191 (335)
+...|+.||...|.+++.++.+. .++++.++||+.++++.
T Consensus 145 ~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~ 186 (244)
T 3d3w_A 145 NHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSM 186 (244)
T ss_dssp TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTTT
T ss_pred CCchHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccccccc
Confidence 45689999999999999888763 27999999999999873
|
| >3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=3.6e-25 Score=192.93 Aligned_cols=174 Identities=14% Similarity=0.121 Sum_probs=137.8
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
+++|++|||||+|+||+++++.|+++|++|++++|+........+.+....+ .++.++.+|++|++++.++++.
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~ 80 (263)
T 3ai3_A 5 ISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFG----VRVLEVAVDVATPEGVDAVVESVR 80 (263)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHC----CCEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcC----CceEEEEcCCCCHHHHHHHHHHHH
Confidence 4568999999999999999999999999999999975444333333322111 4688999999999999888874
Q ss_pred ---CCCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHHH----HcCCCEEEEeccccccCCCCCCCccCCC
Q 019795 80 ---QKFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAMA----KYNCKKLVFSSSATIYGQPEKIPCVEDF 148 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~v~~Ss~~vyg~~~~~~~~e~~ 148 (335)
.++|+|||+||.... ..+.++++..+++|+.++.++++++. +.+.++||++||...+.
T Consensus 81 ~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~----------- 149 (263)
T 3ai3_A 81 SSFGGADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARGGGAIIHNASICAVQ----------- 149 (263)
T ss_dssp HHHSSCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS-----------
T ss_pred HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcC-----------
Confidence 379999999997432 12445677899999999999999864 34567999999988763
Q ss_pred CCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 149 PYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 149 ~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
+..+...|+.||...+.+++.++.+. .++++.++||+.++++
T Consensus 150 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~ 193 (263)
T 3ai3_A 150 PLWYEPIYNVTKAALMMFSKTLATEVIKDNIRVNCINPGLILTP 193 (263)
T ss_dssp CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCH
T ss_pred CCCCcchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCc
Confidence 22345689999999999999888762 2899999999999887
|
| >3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} | Back alignment and structure |
|---|
Probab=99.93 E-value=3e-24 Score=186.63 Aligned_cols=176 Identities=16% Similarity=0.134 Sum_probs=137.5
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
+++|+||||||+|+||+++++.|+++|++|++++|+........+.+... ..++.++.+|++|++++.++++.
T Consensus 11 l~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~ 85 (260)
T 3awd_A 11 LDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRME-----GHDVSSVVMDVTNTESVQNAVRSVH 85 (260)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-----TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-----CCceEEEEecCCCHHHHHHHHHHHH
Confidence 35689999999999999999999999999999999755443333333321 14688999999999999888864
Q ss_pred ---CCCCEEEEcccccc-h----hhhhcChHHHHHHhHHHHHHHHHHHHH----cCCCEEEEeccccccCCCCCCCccCC
Q 019795 80 ---QKFEAVIHFGALKA-V----AESVQHPFRYFDNNLIGTINLYQAMAK----YNCKKLVFSSSATIYGQPEKIPCVED 147 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~-~----~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~v~~Ss~~vyg~~~~~~~~e~ 147 (335)
.++|+|||+||... . ..+.++++..+++|+.++.++++++.. .+.+++|++||...+...
T Consensus 86 ~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~-------- 157 (260)
T 3awd_A 86 EQEGRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQKQGVIVAIGSMSGLIVN-------- 157 (260)
T ss_dssp HHHSCCCEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC--------
T ss_pred HHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEecchhcccC--------
Confidence 37999999999643 1 123445678899999999999998754 356799999997654211
Q ss_pred CCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCCC
Q 019795 148 FPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGAH 191 (335)
Q Consensus 148 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~~ 191 (335)
+..+...|+.+|...|.+++.++.+. .++++.++||+.++++.
T Consensus 158 -~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~ 202 (260)
T 3awd_A 158 -RPQQQAAYNASKAGVHQYIRSLAAEWAPHGIRANAVAPTYIETTL 202 (260)
T ss_dssp -SSSCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTT
T ss_pred -CCCCccccHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeeeeccch
Confidence 22334689999999999999888772 28999999999999973
|
| >1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A | Back alignment and structure |
|---|
Probab=99.93 E-value=1.1e-24 Score=190.06 Aligned_cols=174 Identities=17% Similarity=0.089 Sum_probs=129.8
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
+++|+||||||+|+||+++++.|+++|++|++++|+..........+... ...+.++.+|++|.++++++++.
T Consensus 12 l~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~ 86 (266)
T 1xq1_A 12 LKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKK-----GFQVTGSVCDASLRPEREKLMQTVS 86 (266)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-----TCCEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-----CCeeEEEECCCCCHHHHHHHHHHHH
Confidence 45689999999999999999999999999999999754443333333321 14688999999999999888864
Q ss_pred ----CCCCEEEEcccccchh----hhhcChHHHHHHhHHHHHHHHHHH----HHcCCCEEEEeccccccCCCCCCCccCC
Q 019795 80 ----QKFEAVIHFGALKAVA----ESVQHPFRYFDNNLIGTINLYQAM----AKYNCKKLVFSSSATIYGQPEKIPCVED 147 (335)
Q Consensus 80 ----~~~d~vi~~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~v~~Ss~~vyg~~~~~~~~e~ 147 (335)
.++|+|||+||..... .+.++++..+++|+.++.++++++ ++.+.++||++||...+.
T Consensus 87 ~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~---------- 156 (266)
T 1xq1_A 87 SMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVV---------- 156 (266)
T ss_dssp HHHTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC----------------
T ss_pred HHhCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhcc----------
Confidence 4899999999974322 234566788999999999999987 445678999999977653
Q ss_pred CCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCCC
Q 019795 148 FPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGAH 191 (335)
Q Consensus 148 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~~ 191 (335)
+..+...|+.+|...|.+++.++.+. .+++++++||+.++++.
T Consensus 157 -~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 201 (266)
T 1xq1_A 157 -SASVGSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPL 201 (266)
T ss_dssp -----CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC---
T ss_pred -CCCCCchHHHHHHHHHHHHHHHHHHHhHhCcEEEEEeeCCCccch
Confidence 22345689999999999999887663 28999999999999873
|
| >3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.93 E-value=7.3e-24 Score=185.39 Aligned_cols=171 Identities=23% Similarity=0.156 Sum_probs=140.9
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
+++|++|||||+|+||++++++|+++|++|++++|+........+.+ ..++.++.+|++|+++++++++.
T Consensus 9 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~--------~~~~~~~~~Dv~~~~~v~~~~~~~~ 80 (271)
T 3tzq_B 9 LENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASV--------GRGAVHHVVDLTNEVSVRALIDFTI 80 (271)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHH--------CTTCEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh--------CCCeEEEECCCCCHHHHHHHHHHHH
Confidence 45689999999999999999999999999999999877665544433 15688999999999999988875
Q ss_pred ---CCCCEEEEcccccch------hhhhcChHHHHHHhHHHHHHHHHHH----HHcCCCEEEEeccccccCCCCCCCccC
Q 019795 80 ---QKFEAVIHFGALKAV------AESVQHPFRYFDNNLIGTINLYQAM----AKYNCKKLVFSSSATIYGQPEKIPCVE 146 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~~------~~~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~v~~Ss~~vyg~~~~~~~~e 146 (335)
.++|++||+||.... ..+.+.++..+++|+.++.++++++ ++.+.++||++||...+.
T Consensus 81 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~--------- 151 (271)
T 3tzq_B 81 DTFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAGGGAIVNISSATAHA--------- 151 (271)
T ss_dssp HHHSCCCEEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTS---------
T ss_pred HHcCCCCEEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCHHHcC---------
Confidence 379999999997522 2245667789999999999999997 555667999999987652
Q ss_pred CCCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCCC
Q 019795 147 DFPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGAH 191 (335)
Q Consensus 147 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~~ 191 (335)
+..+...|+.||...+.+++.++.++ .++++.+++|+.|+++.
T Consensus 152 --~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~ 196 (271)
T 3tzq_B 152 --AYDMSTAYACTKAAIETLTRYVATQYGRHGVRCNAIAPGLVRTPR 196 (271)
T ss_dssp --BCSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTT
T ss_pred --CCCCChHHHHHHHHHHHHHHHHHHHHhhcCEEEEEEEeCCCcCcc
Confidence 33455689999999999999988872 28999999999998873
|
| >3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.93 E-value=5e-24 Score=185.27 Aligned_cols=166 Identities=11% Similarity=0.086 Sum_probs=136.7
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
+++|+||||||+|+||+++++.|+++|++|++++|+...... ..+.++.+|++|++++.++++.
T Consensus 26 ~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~--------------~~~~~~~~Dv~d~~~v~~~~~~~~ 91 (260)
T 3un1_A 26 NQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSAD--------------PDIHTVAGDISKPETADRIVREGI 91 (260)
T ss_dssp TTCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCCSS--------------TTEEEEESCTTSHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhccc--------------CceEEEEccCCCHHHHHHHHHHHH
Confidence 457899999999999999999999999999999997654321 4688999999999999988875
Q ss_pred ---CCCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHH----HHcCCCEEEEeccccccCCCCCCCccCCC
Q 019795 80 ---QKFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAM----AKYNCKKLVFSSSATIYGQPEKIPCVEDF 148 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~ 148 (335)
.++|++||+||.... ..+.++++..+++|+.++.++++++ ++.+.+++|++||...+.. .
T Consensus 92 ~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~---------~ 162 (260)
T 3un1_A 92 ERFGRIDSLVNNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQGSGHIVSITTSLVDQP---------M 162 (260)
T ss_dssp HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCTTTTSC---------B
T ss_pred HHCCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechhhccC---------C
Confidence 389999999997432 2345667789999999999999986 4556679999999776532 1
Q ss_pred CCCCCChhHHhHHHHHHHHHHHHhhCC--CCeEEEEecccccCC
Q 019795 149 PYGAMNPYGRTKQWCEEIAFDVQKADP--EWRIILLRYFNPVGA 190 (335)
Q Consensus 149 ~~~~~~~Y~~sK~~~E~~~~~~~~~~~--~~~~~~lR~~~v~G~ 190 (335)
+..+...|+.||...+.+++.++.++. ++++.+++|+.|+++
T Consensus 163 ~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~ 206 (260)
T 3un1_A 163 VGMPSALASLTKGGLNAVTRSLAMEFSRSGVRVNAVSPGVIKTP 206 (260)
T ss_dssp TTCCCHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECCBCCT
T ss_pred CCCccHHHHHHHHHHHHHHHHHHHHhCcCCeEEEEEeecCCCCC
Confidence 334556899999999999999988852 789999999999887
|
| >3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.93 E-value=1.1e-24 Score=191.51 Aligned_cols=175 Identities=15% Similarity=0.101 Sum_probs=136.4
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCC-CchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc-
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHN-SVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~- 79 (335)
+++|++|||||+|+||++++++|+++|++|++++|+.. ......+.+.... ...+.++.+|++|+++++++++.
T Consensus 23 l~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~----~~~~~~~~~Dv~d~~~v~~~~~~~ 98 (281)
T 3v2h_A 23 MMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLS----SGTVLHHPADMTKPSEIADMMAMV 98 (281)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTC----SSCEEEECCCTTCHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhcc----CCcEEEEeCCCCCHHHHHHHHHHH
Confidence 45689999999999999999999999999999998432 2223333333221 25788999999999999988875
Q ss_pred ----CCCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHH----HHcCCCEEEEeccccccCCCCCCCccCC
Q 019795 80 ----QKFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAM----AKYNCKKLVFSSSATIYGQPEKIPCVED 147 (335)
Q Consensus 80 ----~~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~v~~Ss~~vyg~~~~~~~~e~ 147 (335)
.++|++||+||.... ..+.++++..+++|+.++.++++++ ++.+.++||++||...+.
T Consensus 99 ~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~---------- 168 (281)
T 3v2h_A 99 ADRFGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKGWGRIINIASAHGLV---------- 168 (281)
T ss_dssp HHHTSSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS----------
T ss_pred HHHCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCccccc----------
Confidence 389999999997432 2245667789999999999999986 444567999999977652
Q ss_pred CCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCCC
Q 019795 148 FPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGAH 191 (335)
Q Consensus 148 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~~ 191 (335)
+......|+.||...+.+++.++.++ .++++.+++|+.|.++-
T Consensus 169 -~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~ 213 (281)
T 3v2h_A 169 -ASPFKSAYVAAKHGIMGLTKTVALEVAESGVTVNSICPGYVLTPL 213 (281)
T ss_dssp -CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC--
T ss_pred -CCCCchHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEECCCCcCcc
Confidence 23345689999999999999888764 27999999999998873
|
| >3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.92 E-value=9.5e-25 Score=190.32 Aligned_cols=175 Identities=16% Similarity=0.185 Sum_probs=136.5
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc---
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS--- 79 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~--- 79 (335)
+||++|||||+|+||++++++|+++|++|++++|+.....+........ ...++.++.+|++|++++.++++.
T Consensus 6 ~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~Dl~~~~~v~~~~~~~~~ 81 (264)
T 3i4f_A 6 FVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKD----VEERLQFVQADVTKKEDLHKIVEEAMS 81 (264)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGG----GGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred ccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHh----cCCceEEEEecCCCHHHHHHHHHHHHH
Confidence 4689999999999999999999999999999988654332222222211 125789999999999999988875
Q ss_pred --CCCCEEEEcccc--c----chhhhhcChHHHHHHhHHHHHHHHHHH----HHcCCCEEEEeccccccCCCCCCCccCC
Q 019795 80 --QKFEAVIHFGAL--K----AVAESVQHPFRYFDNNLIGTINLYQAM----AKYNCKKLVFSSSATIYGQPEKIPCVED 147 (335)
Q Consensus 80 --~~~d~vi~~a~~--~----~~~~~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~v~~Ss~~vyg~~~~~~~~e~ 147 (335)
.++|+|||+||. . ....+.++++..+++|+.++.++++++ ++.+.+++|++||...++..
T Consensus 82 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~-------- 153 (264)
T 3i4f_A 82 HFGKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQNFGRIINYGFQGADSAP-------- 153 (264)
T ss_dssp HHSCCCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTTGGGCC--------
T ss_pred HhCCCCEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCeEEEEeechhcccC--------
Confidence 389999999993 1 222345567789999999999999987 45566799999997554221
Q ss_pred CCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 148 FPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 148 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
+..+...|+.+|...+.+++.++.+. .++++.+++|+.|+++
T Consensus 154 -~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~ 197 (264)
T 3i4f_A 154 -GWIYRSAFAAAKVGLVSLTKTVAYEEAEYGITANMVCPGDIIGE 197 (264)
T ss_dssp -CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCGG
T ss_pred -CCCCCchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEccCCccCc
Confidence 23345689999999999999888772 2899999999999887
|
| >3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=2.3e-24 Score=187.17 Aligned_cols=174 Identities=16% Similarity=0.127 Sum_probs=137.6
Q ss_pred CCCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEE-ecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc
Q 019795 1 MASEKNILVTGGAGFIGTHCALQLLQGGFKVVLI-DNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS 79 (335)
Q Consensus 1 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~ 79 (335)
|+++|++|||||+|+||++++++|+++|++|+++ +|+........+.+... ..++.++.+|++|+++++++++.
T Consensus 1 M~~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~ 75 (258)
T 3oid_A 1 MEQNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKL-----GVKVLVVKANVGQPAKIKEMFQQ 75 (258)
T ss_dssp --CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTT-----TCCEEEEECCTTCHHHHHHHHHH
T ss_pred CCCCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc-----CCcEEEEEcCCCCHHHHHHHHHH
Confidence 7889999999999999999999999999999987 66544444444443322 25789999999999999988875
Q ss_pred -----CCCCEEEEcccccc----hhhhhcChHHHHHHhHHHHHHHHHHHH----HcCCCEEEEeccccccCCCCCCCccC
Q 019795 80 -----QKFEAVIHFGALKA----VAESVQHPFRYFDNNLIGTINLYQAMA----KYNCKKLVFSSSATIYGQPEKIPCVE 146 (335)
Q Consensus 80 -----~~~d~vi~~a~~~~----~~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~v~~Ss~~vyg~~~~~~~~e 146 (335)
.++|++||+||... ...+.++++..+++|+.++.++++++. +.+.++||++||...+.
T Consensus 76 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~--------- 146 (258)
T 3oid_A 76 IDETFGRLDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNGGGHIVSISSLGSIR--------- 146 (258)
T ss_dssp HHHHHSCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEEEEGGGTS---------
T ss_pred HHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhCC---------
Confidence 37899999998632 223455677899999999999999874 34456999999977652
Q ss_pred CCCCCCCChhHHhHHHHHHHHHHHHhhCC--CCeEEEEecccccCC
Q 019795 147 DFPYGAMNPYGRTKQWCEEIAFDVQKADP--EWRIILLRYFNPVGA 190 (335)
Q Consensus 147 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~--~~~~~~lR~~~v~G~ 190 (335)
+..+...|+.||...+.+++.++.++. ++++.+++|+.|..+
T Consensus 147 --~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~ 190 (258)
T 3oid_A 147 --YLENYTTVGVSKAALEALTRYLAVELSPKQIIVNAVSGGAIDTD 190 (258)
T ss_dssp --BCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECCBCSG
T ss_pred --CCCCcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCh
Confidence 334557899999999999999888752 789999999998776
|
| >3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.92 E-value=2.8e-24 Score=186.58 Aligned_cols=169 Identities=16% Similarity=0.165 Sum_probs=131.8
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc---
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS--- 79 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~--- 79 (335)
++|++|||||+|+||+++++.|+++|++|++++|+........+.+ ...+.++.+|++|++++.++++.
T Consensus 6 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~--------~~~~~~~~~Dv~~~~~v~~~~~~~~~ 77 (257)
T 3tpc_A 6 KSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAEL--------GAAVRFRNADVTNEADATAALAFAKQ 77 (257)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC--------------------CEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh--------CCceEEEEccCCCHHHHHHHHHHHHH
Confidence 4589999999999999999999999999999999877655444332 15688999999999999988874
Q ss_pred --CCCCEEEEcccccch--------hhhhcChHHHHHHhHHHHHHHHHHHHHc----------CCCEEEEeccccccCCC
Q 019795 80 --QKFEAVIHFGALKAV--------AESVQHPFRYFDNNLIGTINLYQAMAKY----------NCKKLVFSSSATIYGQP 139 (335)
Q Consensus 80 --~~~d~vi~~a~~~~~--------~~~~~~~~~~~~~nv~~~~~l~~~~~~~----------~~~~~v~~Ss~~vyg~~ 139 (335)
.++|++||+||.... ..+.++++..+++|+.++.++++++... +..+||++||...+.
T Consensus 78 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~~~-- 155 (257)
T 3tpc_A 78 EFGHVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFD-- 155 (257)
T ss_dssp HHSCCCEEEECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHH--
T ss_pred HcCCCCEEEECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhhcc--
Confidence 389999999997532 2234667789999999999999997653 345899999977652
Q ss_pred CCCCccCCCCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 140 EKIPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 140 ~~~~~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
+..+...|+.||...+.+++.++.++ .++++.+++|+.|.++
T Consensus 156 ---------~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~ 199 (257)
T 3tpc_A 156 ---------GQIGQAAYAASKGGVAALTLPAARELARFGIRVVTIAPGIFDTP 199 (257)
T ss_dssp ---------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSCC
T ss_pred ---------CCCCCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEeCCCCCh
Confidence 23345689999999999999888772 2899999999999876
|
| >2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.92 E-value=1.2e-24 Score=189.57 Aligned_cols=179 Identities=16% Similarity=0.022 Sum_probs=134.4
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcC--CccccceeEEEccCCCHHHHHHHHhc
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAG--PELAKKLEFHVGDLRNKDDLDKLFSS 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~i~~~~~Dl~d~~~~~~~~~~ 79 (335)
+++|+||||||+|+||+++++.|+++|++|++++|+........+.+..... .....++.++.+|++|.+++.++++.
T Consensus 5 ~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 84 (264)
T 2pd6_A 5 LRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLLEQ 84 (264)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHHHHH
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHHHHH
Confidence 4578999999999999999999999999999999975443333332221110 00014678999999999998888774
Q ss_pred -----CCC-CEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHHHHc----C-CCEEEEeccccccCCCCCCCc
Q 019795 80 -----QKF-EAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAMAKY----N-CKKLVFSSSATIYGQPEKIPC 144 (335)
Q Consensus 80 -----~~~-d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~~----~-~~~~v~~Ss~~vyg~~~~~~~ 144 (335)
.++ |+|||+||.... ..+.++++..+++|+.++.++++++... + .++||++||...+.
T Consensus 85 ~~~~~g~i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~------- 157 (264)
T 2pd6_A 85 VQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKV------- 157 (264)
T ss_dssp HHHHHSSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHH-------
T ss_pred HHHHhCCCCeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECChhhcc-------
Confidence 245 999999997432 2245567789999999999999987653 4 46999999975441
Q ss_pred cCCCCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCCC
Q 019795 145 VEDFPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGAH 191 (335)
Q Consensus 145 ~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~~ 191 (335)
+..+...|+.+|...|.+++.++.+. .+++++++||+.++++.
T Consensus 158 ----~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 202 (264)
T 2pd6_A 158 ----GNVGQTNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPM 202 (264)
T ss_dssp ----CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSCC
T ss_pred ----CCCCChhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeecccccc
Confidence 22345689999999999999887762 28999999999999873
|
| >3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} | Back alignment and structure |
|---|
Probab=99.92 E-value=1.2e-24 Score=191.29 Aligned_cols=174 Identities=15% Similarity=0.077 Sum_probs=137.6
Q ss_pred CCCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc-
Q 019795 1 MASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS- 79 (335)
Q Consensus 1 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~- 79 (335)
|+++|++|||||+|+||+++++.|+++|++|++++|+........+.+... ...+.++.+|++|+++++++++.
T Consensus 21 m~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~-----~~~~~~~~~Dv~d~~~v~~~~~~~ 95 (279)
T 3sju_A 21 MSRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAA-----GHDVDGSSCDVTSTDEVHAAVAAA 95 (279)
T ss_dssp ----CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT-----TCCEEEEECCTTCHHHHHHHHHHH
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-----CCcEEEEECCCCCHHHHHHHHHHH
Confidence 778899999999999999999999999999999999765555554444432 25788999999999999888775
Q ss_pred ----CCCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHHHH------cCCCEEEEeccccccCCCCCCCcc
Q 019795 80 ----QKFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAMAK------YNCKKLVFSSSATIYGQPEKIPCV 145 (335)
Q Consensus 80 ----~~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~------~~~~~~v~~Ss~~vyg~~~~~~~~ 145 (335)
.++|+|||+||.... ..+.++++..+++|+.++.++++++.. .+.++||++||...+.
T Consensus 96 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~g~iV~isS~~~~~-------- 167 (279)
T 3sju_A 96 VERFGPIGILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTGGKQ-------- 167 (279)
T ss_dssp HHHHCSCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHTCEEEEEECCGGGTS--------
T ss_pred HHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcCCcEEEEECChhhcc--------
Confidence 379999999997432 224456778899999999999998754 3557999999977652
Q ss_pred CCCCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 146 EDFPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 146 e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
+..+...|+.||...+.+++.++.+. .++++.+++|+.|.++
T Consensus 168 ---~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~ 211 (279)
T 3sju_A 168 ---GVMYAAPYTASKHGVVGFTKSVGFELAKTGITVNAVCPGYVETP 211 (279)
T ss_dssp ---CCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEESSBCSH
T ss_pred ---CCCCChhHHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCcccch
Confidence 33445689999999999999988874 2789999999998765
|
| >2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=4.4e-25 Score=192.05 Aligned_cols=173 Identities=18% Similarity=0.176 Sum_probs=136.9
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
+++|++|||||+|+||+++++.|+++|++|++++|+........+.+... ..++.++.+|++|.+++.++++.
T Consensus 12 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~ 86 (260)
T 2zat_A 12 LENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGE-----GLSVTGTVCHVGKAEDRERLVAMAV 86 (260)
T ss_dssp TTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-----TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-----CCceEEEEccCCCHHHHHHHHHHHH
Confidence 35689999999999999999999999999999999755443333333321 14688899999999998888764
Q ss_pred ---CCCCEEEEcccccc-----hhhhhcChHHHHHHhHHHHHHHHHHHH----HcCCCEEEEeccccccCCCCCCCccCC
Q 019795 80 ---QKFEAVIHFGALKA-----VAESVQHPFRYFDNNLIGTINLYQAMA----KYNCKKLVFSSSATIYGQPEKIPCVED 147 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~-----~~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~v~~Ss~~vyg~~~~~~~~e~ 147 (335)
.++|+|||+||... ...+.++++..+++|+.++.++++++. +.+.++||++||...|.
T Consensus 87 ~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~---------- 156 (260)
T 2zat_A 87 NLHGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYH---------- 156 (260)
T ss_dssp HHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTS----------
T ss_pred HHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEechhhcC----------
Confidence 37999999999632 123445677899999999999999864 44567999999988763
Q ss_pred CCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 148 FPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 148 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
+..+...|+.+|...+.+++.++.++ .++++.+++|+.+.++
T Consensus 157 -~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~ 200 (260)
T 2zat_A 157 -PFPNLGPYNVSKTALLGLTKNLAVELAPRNIRVNCLAPGLIKTN 200 (260)
T ss_dssp -CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSS
T ss_pred -CCCCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcccCc
Confidence 23345689999999999999887763 2789999999998776
|
| >3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} | Back alignment and structure |
|---|
Probab=99.92 E-value=5.4e-24 Score=184.66 Aligned_cols=219 Identities=15% Similarity=0.102 Sum_probs=162.3
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
+++|++|||||+|+||++++++|+++|++|++++|+........+.+... ..++.++.+|++|+++++++++.
T Consensus 10 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~Dv~d~~~v~~~~~~~~ 84 (256)
T 3gaf_A 10 LNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQA-----GGKAIGLECNVTDEQHREAVIKAAL 84 (256)
T ss_dssp CTTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHT-----TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-----CCcEEEEECCCCCHHHHHHHHHHHH
Confidence 45789999999999999999999999999999999765555444444332 25788999999999999888875
Q ss_pred ---CCCCEEEEcccccch---hhhhcChHHHHHHhHHHHHHHHHHHH----HcCCCEEEEeccccccCCCCCCCccCCCC
Q 019795 80 ---QKFEAVIHFGALKAV---AESVQHPFRYFDNNLIGTINLYQAMA----KYNCKKLVFSSSATIYGQPEKIPCVEDFP 149 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~~---~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~ 149 (335)
.++|++||+||.... ..+.++++..+++|+.++.++++++. +.+.++||++||...+. +
T Consensus 85 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~-----------~ 153 (256)
T 3gaf_A 85 DQFGKITVLVNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGGGAILNISSMAGEN-----------T 153 (256)
T ss_dssp HHHSCCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTC-----------C
T ss_pred HHcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHHcC-----------C
Confidence 389999999997432 23456777899999999999999864 34557999999977652 3
Q ss_pred CCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHHHhCCCCceeEecc
Q 019795 150 YGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQ 227 (335)
Q Consensus 150 ~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 227 (335)
..+...|+.||...+.+++.++.++ .++++.+++|+.|..+... ....+..........
T Consensus 154 ~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~-----------~~~~~~~~~~~~~~~-------- 214 (256)
T 3gaf_A 154 NVRMASYGSSKAAVNHLTRNIAFDVGPMGIRVNAIAPGAIKTDALA-----------TVLTPEIERAMLKHT-------- 214 (256)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHH-----------HHCCHHHHHHHHTTC--------
T ss_pred CCCchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEEccccCchhh-----------hccCHHHHHHHHhcC--------
Confidence 3445689999999999999888774 2789999999988765110 000112222222222
Q ss_pred cCCCCCCceeeeeeeHhhhhc-------------cCceEEecCCccccH
Q 019795 228 DYPTKDGSAVRDYIHVMDLAD-------------GCIAYNLGNGKGISV 263 (335)
Q Consensus 228 ~~~~~~~~~~~~~v~~~D~~~-------------~~~~~nv~~~~~~s~ 263 (335)
....+.+.+|+++ .++++++.+|...++
T Consensus 215 --------p~~r~~~~~dva~~~~~L~s~~~~~itG~~i~vdgG~~~~~ 255 (256)
T 3gaf_A 215 --------PLGRLGEAQDIANAALFLCSPAAAWISGQVLTVSGGGVQEL 255 (256)
T ss_dssp --------TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSCCC-
T ss_pred --------CCCCCCCHHHHHHHHHHHcCCcccCccCCEEEECCCccccC
Confidence 2234678888876 488999988876654
|
| >3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.92 E-value=4e-24 Score=186.12 Aligned_cols=175 Identities=18% Similarity=0.126 Sum_probs=140.0
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
+++|++|||||+|+||+++++.|+++|++|++++|+........+.+.+... .++.++.+|++|+++++++++.
T Consensus 8 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~----~~~~~~~~Dv~~~~~v~~~~~~~~ 83 (262)
T 3pk0_A 8 LQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGS----GKVIGVQTDVSDRAQCDALAGRAV 83 (262)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSS----SCEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCC----CcEEEEEcCCCCHHHHHHHHHHHH
Confidence 3568999999999999999999999999999999976655555555543321 5788999999999999888774
Q ss_pred ---CCCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHHHHc----CCCEEEEeccccccCCCCCCCccCCC
Q 019795 80 ---QKFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAMAKY----NCKKLVFSSSATIYGQPEKIPCVEDF 148 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~~v~~Ss~~vyg~~~~~~~~e~~ 148 (335)
.++|++||+||.... ..+.++++..+++|+.++.++++++... +.+++|++||..... .
T Consensus 84 ~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~----------~ 153 (262)
T 3pk0_A 84 EEFGGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASGSGRVVLTSSITGPI----------T 153 (262)
T ss_dssp HHHSCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCEEEEECCSBTTT----------B
T ss_pred HHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhcc----------C
Confidence 389999999997432 2245667788999999999999986553 667999999966420 1
Q ss_pred CCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 149 PYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 149 ~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
+..+...|+.||...+.+++.++.++ .++++.+++|+.|+++
T Consensus 154 ~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~ 197 (262)
T 3pk0_A 154 GYPGWSHYGATKAAQLGFMRTAAIELAPHKITVNAIMPGNIMTE 197 (262)
T ss_dssp CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCH
T ss_pred CCCCChhhHHHHHHHHHHHHHHHHHHHhhCcEEEEEEeCcCcCc
Confidence 23345689999999999999988773 2899999999999886
|
| >3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.92 E-value=5e-24 Score=187.45 Aligned_cols=178 Identities=19% Similarity=0.135 Sum_probs=137.9
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCc--------hhhHHhhhhhcCCccccceeEEEccCCCHHHH
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSV--------PEAVDRVKDLAGPELAKKLEFHVGDLRNKDDL 73 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~--------~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~ 73 (335)
+++|++|||||+|+||+++++.|+++|++|++++|++... .+......+... ....++.++.+|++|++++
T Consensus 8 l~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dv~~~~~v 86 (281)
T 3s55_A 8 FEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVE-KTGRRCISAKVDVKDRAAL 86 (281)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHH-HTTCCEEEEECCTTCHHHH
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHH-hcCCeEEEEeCCCCCHHHH
Confidence 4568999999999999999999999999999999974321 111111111100 1125788999999999999
Q ss_pred HHHHhc-----CCCCEEEEcccccc----hhhhhcChHHHHHHhHHHHHHHHHHHH----HcCCCEEEEeccccccCCCC
Q 019795 74 DKLFSS-----QKFEAVIHFGALKA----VAESVQHPFRYFDNNLIGTINLYQAMA----KYNCKKLVFSSSATIYGQPE 140 (335)
Q Consensus 74 ~~~~~~-----~~~d~vi~~a~~~~----~~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~v~~Ss~~vyg~~~ 140 (335)
+++++. .++|++||+||... ...+.++++..+++|+.++.++++++. +.+.++||++||...+.
T Consensus 87 ~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--- 163 (281)
T 3s55_A 87 ESFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLGHS--- 163 (281)
T ss_dssp HHHHHHHHHHHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGS---
T ss_pred HHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhcC---
Confidence 988875 38999999999753 223456677899999999999999853 44567999999977652
Q ss_pred CCCccCCCCCCCCChhHHhHHHHHHHHHHHHhhCC--CCeEEEEecccccCCC
Q 019795 141 KIPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKADP--EWRIILLRYFNPVGAH 191 (335)
Q Consensus 141 ~~~~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~--~~~~~~lR~~~v~G~~ 191 (335)
+..+...|+.||...+.+++.++.++. ++++.+++|+.|+++.
T Consensus 164 --------~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~ 208 (281)
T 3s55_A 164 --------ANFAQASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNIETPM 208 (281)
T ss_dssp --------CCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSTT
T ss_pred --------CCCCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCcc
Confidence 334456899999999999999988742 7999999999999874
|
| >3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=99.92 E-value=2.5e-24 Score=190.18 Aligned_cols=175 Identities=17% Similarity=0.105 Sum_probs=140.8
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
+++|+||||||+|+||+++++.|+++|++|++++|+........+.+.... ..++.++.+|++|+++++++++.
T Consensus 39 l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~----~~~~~~~~~Dv~d~~~v~~~~~~~~ 114 (293)
T 3rih_A 39 LSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELG----AGNVIGVRLDVSDPGSCADAARTVV 114 (293)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSS----SSCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhC----CCcEEEEEEeCCCHHHHHHHHHHHH
Confidence 356899999999999999999999999999999998776666555554332 14788999999999998888775
Q ss_pred ---CCCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHH----HHcCCCEEEEeccccccCCCCCCCccCCC
Q 019795 80 ---QKFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAM----AKYNCKKLVFSSSATIYGQPEKIPCVEDF 148 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~ 148 (335)
.++|++||+||.... ..+.++++..+++|+.++.++++++ ++.+.++||++||...+. .
T Consensus 115 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iV~isS~~~~~----------~ 184 (293)
T 3rih_A 115 DAFGALDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASGRGRVILTSSITGPV----------T 184 (293)
T ss_dssp HHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHSSCEEEEECCSBTTT----------B
T ss_pred HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEeChhhcc----------C
Confidence 389999999997432 2245677789999999999999986 355667999999966420 1
Q ss_pred CCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 149 PYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 149 ~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
+..+...|+.||...+.+++.++.++ .++++.+++|+.|+++
T Consensus 185 ~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~ 228 (293)
T 3rih_A 185 GYPGWSHYGASKAAQLGFMRTAAIELAPRGVTVNAILPGNILTE 228 (293)
T ss_dssp BCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCCcCc
Confidence 22345689999999999999888773 2899999999999886
|
| >2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=2.2e-24 Score=186.05 Aligned_cols=174 Identities=17% Similarity=0.089 Sum_probs=134.8
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
+++|+++||||+|+||++++++|+++|++|++++|+........+.+.+..+ ..+.++.+|++|+++++++++.
T Consensus 5 ~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~ 80 (248)
T 2pnf_A 5 LQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYG----VKAHGVEMNLLSEESINKAFEEIY 80 (248)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHC----CCEEEEECCTTCHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhcC----CceEEEEccCCCHHHHHHHHHHHH
Confidence 4578999999999999999999999999999999975443333333322111 4688999999999999988874
Q ss_pred ---CCCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHH----HHcCCCEEEEeccccccCCCCCCCccCCC
Q 019795 80 ---QKFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAM----AKYNCKKLVFSSSATIYGQPEKIPCVEDF 148 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~ 148 (335)
.++|+|||+|+.... ..+.++++..+++|+.++.++++++ ++.+.++||++||...+.
T Consensus 81 ~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~----------- 149 (248)
T 2pnf_A 81 NLVDGIDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQRWGRIVNISSVVGFT----------- 149 (248)
T ss_dssp HHSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHTCEEEEEECCHHHHH-----------
T ss_pred HhcCCCCEEEECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhcC-----------
Confidence 379999999997432 2234566789999999998877764 445668999999975431
Q ss_pred CCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 149 PYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 149 ~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
+..+...|+.+|...+.+++.++.+. .++++.++||+.++++
T Consensus 150 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~ 193 (248)
T 2pnf_A 150 GNVGQVNYSTTKAGLIGFTKSLAKELAPRNVLVNAVAPGFIETD 193 (248)
T ss_dssp CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCG
T ss_pred CCCCCchHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeceecCc
Confidence 12234689999999999999887653 2789999999999886
|
| >3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.92 E-value=9.8e-24 Score=182.07 Aligned_cols=173 Identities=14% Similarity=0.072 Sum_probs=138.7
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
+++|++|||||+|+||+++++.|+++|++|++++|+..........+.+. +.++.++.+|++|+++++++++.
T Consensus 3 l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~ 77 (247)
T 3lyl_A 3 LNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEK-----GFKARGLVLNISDIESIQNFFAEIK 77 (247)
T ss_dssp TTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHT-----TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-----CCceEEEEecCCCHHHHHHHHHHHH
Confidence 56799999999999999999999999999999999765555444444332 25789999999999999988875
Q ss_pred ---CCCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHHHH----cCCCEEEEeccccccCCCCCCCccCCC
Q 019795 80 ---QKFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAMAK----YNCKKLVFSSSATIYGQPEKIPCVEDF 148 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~v~~Ss~~vyg~~~~~~~~e~~ 148 (335)
.++|+|||+||.... ..+.++++..+++|+.++.++++++.. .+..++|++||...+.
T Consensus 78 ~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~----------- 146 (247)
T 3lyl_A 78 AENLAIDILVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKRWGRIISIGSVVGSA----------- 146 (247)
T ss_dssp HTTCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHH-----------
T ss_pred HHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhcc-----------
Confidence 379999999997532 224566778999999999999998643 3456999999977652
Q ss_pred CCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 149 PYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 149 ~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
+..+...|+.+|...+.+++.++.++ .++++.+++|+.+..+
T Consensus 147 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~ 190 (247)
T 3lyl_A 147 GNPGQTNYCAAKAGVIGFSKSLAYEVASRNITVNVVAPGFIATD 190 (247)
T ss_dssp CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCT
T ss_pred CCCCcHHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCcEecc
Confidence 23345689999999999999888763 2799999999998776
|
| >2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} | Back alignment and structure |
|---|
Probab=99.92 E-value=2.2e-24 Score=186.04 Aligned_cols=172 Identities=16% Similarity=0.150 Sum_probs=124.8
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEE-ecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc-
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLI-DNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~- 79 (335)
+++|+||||||+|+||++++++|+++|++|+++ +|++.......+.+... ..++.++.+|++|+++++++++.
T Consensus 3 l~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~ 77 (247)
T 2hq1_A 3 LKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAA-----GINVVVAKGDVKNPEDVENMVKTA 77 (247)
T ss_dssp TTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHT-----TCCEEEEESCTTSHHHHHHHHHHH
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhc-----CCcEEEEECCCCCHHHHHHHHHHH
Confidence 467899999999999999999999999999998 45444333333333221 15688999999999999888874
Q ss_pred ----CCCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHHHH----cCCCEEEEecccc-ccCCCCCCCccC
Q 019795 80 ----QKFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAMAK----YNCKKLVFSSSAT-IYGQPEKIPCVE 146 (335)
Q Consensus 80 ----~~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~v~~Ss~~-vyg~~~~~~~~e 146 (335)
.++|+|||+||.... ..+.++++..+++|+.++.++++++.. .+.++||++||.. .|+.
T Consensus 78 ~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~-------- 149 (247)
T 2hq1_A 78 MDAFGRIDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQKSGKIINITSIAGIIGN-------- 149 (247)
T ss_dssp HHHHSCCCEEEECC---------------CHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECC---------------
T ss_pred HHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCC--------
Confidence 379999999997532 224566778999999999999888653 4667999999964 4432
Q ss_pred CCCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 147 DFPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 147 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
.+...|+.+|...|.+++.++.+. .++++.+++|+.+.++
T Consensus 150 ----~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~ 191 (247)
T 2hq1_A 150 ----AGQANYAASKAGLIGFTKSIAKEFAAKGIYCNAVAPGIIKTD 191 (247)
T ss_dssp ------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCH
T ss_pred ----CCCcHhHHHHHHHHHHHHHHHHHHHHcCcEEEEEEEEEEecc
Confidence 234689999999999999887663 2789999999988665
|
| >3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=99.92 E-value=3.1e-24 Score=186.33 Aligned_cols=175 Identities=17% Similarity=0.121 Sum_probs=139.8
Q ss_pred CCCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc-
Q 019795 1 MASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS- 79 (335)
Q Consensus 1 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~- 79 (335)
.|++|++|||||+|+||+++++.|+++|++|++++|+..........+... +.++.++.+|++|+++++++++.
T Consensus 3 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~ 77 (257)
T 3imf_A 3 AMKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQF-----PGQILTVQMDVRNTDDIQKMIEQI 77 (257)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCS-----TTCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-----CCcEEEEEccCCCHHHHHHHHHHH
Confidence 367899999999999999999999999999999999765555444444321 25788999999999999988875
Q ss_pred ----CCCCEEEEcccccc----hhhhhcChHHHHHHhHHHHHHHHHHHH-----HcCCCEEEEeccccccCCCCCCCccC
Q 019795 80 ----QKFEAVIHFGALKA----VAESVQHPFRYFDNNLIGTINLYQAMA-----KYNCKKLVFSSSATIYGQPEKIPCVE 146 (335)
Q Consensus 80 ----~~~d~vi~~a~~~~----~~~~~~~~~~~~~~nv~~~~~l~~~~~-----~~~~~~~v~~Ss~~vyg~~~~~~~~e 146 (335)
.++|++||+||... ...+.++++..+++|+.++.++++++. +.+..+||++||...+.
T Consensus 78 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--------- 148 (257)
T 3imf_A 78 DEKFGRIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVATYAWD--------- 148 (257)
T ss_dssp HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGGS---------
T ss_pred HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcEEEEECchhhcc---------
Confidence 38999999999632 223456677899999999999999873 33457999999977652
Q ss_pred CCCCCCCChhHHhHHHHHHHHHHHHhhCC---CCeEEEEecccccCCC
Q 019795 147 DFPYGAMNPYGRTKQWCEEIAFDVQKADP---EWRIILLRYFNPVGAH 191 (335)
Q Consensus 147 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~---~~~~~~lR~~~v~G~~ 191 (335)
+..+...|+.||...+.+++.++.++. ++++.+++|+.|.++.
T Consensus 149 --~~~~~~~Y~asKaa~~~l~~~la~e~~~~~gIrvn~v~PG~v~t~~ 194 (257)
T 3imf_A 149 --AGPGVIHSAAAKAGVLAMTKTLAVEWGRKYGIRVNAIAPGPIERTG 194 (257)
T ss_dssp --CCTTCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCBSSCC
T ss_pred --CCCCcHHHHHHHHHHHHHHHHHHHHhccccCeEEEEEEECCCcCCc
Confidence 233456899999999999998876541 8999999999998873
|
| >2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.92 E-value=5.8e-24 Score=184.52 Aligned_cols=167 Identities=18% Similarity=0.143 Sum_probs=131.5
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
+++|++|||||+|+||++++++|+++|++|++++|+... ....+.+ .. .++.+|++|++++.++++.
T Consensus 4 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~---------~~-~~~~~D~~~~~~~~~~~~~~~ 72 (256)
T 2d1y_A 4 FAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAEAI---------GG-AFFQVDLEDERERVRFVEEAA 72 (256)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHHHHHH---------TC-EEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH-HHHHHHh---------hC-CEEEeeCCCHHHHHHHHHHHH
Confidence 456899999999999999999999999999999997654 3322222 13 7789999999998888764
Q ss_pred ---CCCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHHHH----cCCCEEEEeccccccCCCCCCCccCCC
Q 019795 80 ---QKFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAMAK----YNCKKLVFSSSATIYGQPEKIPCVEDF 148 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~v~~Ss~~vyg~~~~~~~~e~~ 148 (335)
.++|+|||+||.... ..+.++++..+++|+.++.++++++.. .+.++||++||...+.
T Consensus 73 ~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~----------- 141 (256)
T 2d1y_A 73 YALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLF----------- 141 (256)
T ss_dssp HHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTS-----------
T ss_pred HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccccccC-----------
Confidence 379999999997432 123456678999999999999998653 3567999999976542
Q ss_pred CCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 149 PYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 149 ~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
+..+...|+.||...+.+++.++.++ .++++.+++|+.+.++
T Consensus 142 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~ 185 (256)
T 2d1y_A 142 AEQENAAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATE 185 (256)
T ss_dssp BCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCH
T ss_pred CCCCChhHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCccCc
Confidence 22344689999999999999888763 2789999999988664
|
| >2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A | Back alignment and structure |
|---|
Probab=99.92 E-value=1.8e-23 Score=181.31 Aligned_cols=171 Identities=16% Similarity=0.077 Sum_probs=135.9
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
+++|++|||||+|+||++++++|+++|++|++++|+.. ....+.+... ..++.++.+|++|++++.++++.
T Consensus 2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~--~~~~~~l~~~-----~~~~~~~~~D~~~~~~v~~~~~~~~ 74 (255)
T 2q2v_A 2 LKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDP--APALAEIARH-----GVKAVHHPADLSDVAQIEALFALAE 74 (255)
T ss_dssp CTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCC--HHHHHHHHTT-----SCCEEEECCCTTSHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCch--HHHHHHHHhc-----CCceEEEeCCCCCHHHHHHHHHHHH
Confidence 56899999999999999999999999999999998755 3333333321 14678899999999999988874
Q ss_pred ---CCCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHH----HHcCCCEEEEeccccccCCCCCCCccCCC
Q 019795 80 ---QKFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAM----AKYNCKKLVFSSSATIYGQPEKIPCVEDF 148 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~ 148 (335)
.++|+|||+||.... ..+.++++..+++|+.++.++++++ ++.+.++||++||...+.
T Consensus 75 ~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~----------- 143 (255)
T 2q2v_A 75 REFGGVDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARNWGRIINIASVHGLV----------- 143 (255)
T ss_dssp HHHSSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTS-----------
T ss_pred HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcCchhcc-----------
Confidence 379999999997432 2234567789999999988887775 455667999999987653
Q ss_pred CCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 149 PYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 149 ~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
+..+...|+.+|...+.+++.++.+. .++++.+++|+.++++
T Consensus 144 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~ 187 (255)
T 2q2v_A 144 GSTGKAAYVAAKHGVVGLTKVVGLETATSNVTCNAICPGWVLTP 187 (255)
T ss_dssp CCTTBHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEESSBCCH
T ss_pred CCCCchhHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcCc
Confidence 22334679999999999999988874 2789999999999886
|
| >1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.92 E-value=1.1e-23 Score=183.47 Aligned_cols=181 Identities=20% Similarity=0.144 Sum_probs=139.5
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
+++|+||||||+|+||++++++|+++|++|++++|+........+.+.+..+ .++.++.+|++|.++++++++.
T Consensus 12 ~~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~----~~~~~~~~Dl~~~~~~~~~~~~~~ 87 (265)
T 1h5q_A 12 FVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFG----VKTKAYQCDVSNTDIVTKTIQQID 87 (265)
T ss_dssp CTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHT----CCEEEEECCTTCHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhcC----CeeEEEEeeCCCHHHHHHHHHHHH
Confidence 4568999999999999999999999999999999976655444444432222 5788999999999999888764
Q ss_pred ---CCCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHHHHc----C-CCEEEEeccccccCCCCCCCccCC
Q 019795 80 ---QKFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAMAKY----N-CKKLVFSSSATIYGQPEKIPCVED 147 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~~----~-~~~~v~~Ss~~vyg~~~~~~~~e~ 147 (335)
..+|+|||+||.... ..+.++++..+++|+.++.++++++... + .++||++||...+..... ..
T Consensus 88 ~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~----~~ 163 (265)
T 1h5q_A 88 ADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQS----SL 163 (265)
T ss_dssp HHSCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEE----ET
T ss_pred HhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCchhhccccc----cc
Confidence 369999999997432 2244566788999999999999987543 3 378999999776532110 01
Q ss_pred CCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 148 FPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 148 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
.+..+...|+.+|...|.+++.++.+. .+++++++||+.++++
T Consensus 164 ~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~ 208 (265)
T 1h5q_A 164 NGSLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTD 208 (265)
T ss_dssp TEECSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCG
T ss_pred cccccccccHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCccccc
Confidence 233456789999999999999887663 2799999999999887
|
| >3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.92 E-value=6.6e-24 Score=186.40 Aligned_cols=181 Identities=14% Similarity=0.141 Sum_probs=136.9
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCC--------chhhHHhhhhhcCCccccceeEEEccCCCHHHH
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNS--------VPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDL 73 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~--------~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~ 73 (335)
+++|++|||||+|+||+++++.|+++|++|++++|+... ..+..+...+... ....++.++.+|++|++++
T Consensus 11 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~v 89 (278)
T 3sx2_A 11 LTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVE-DIGSRIVARQADVRDRESL 89 (278)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHH-HHTCCEEEEECCTTCHHHH
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHH-hcCCeEEEEeCCCCCHHHH
Confidence 467999999999999999999999999999999987321 1111111111100 1125789999999999999
Q ss_pred HHHHhc-----CCCCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHH----cC-CCEEEEeccccccCCCCCCC
Q 019795 74 DKLFSS-----QKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAK----YN-CKKLVFSSSATIYGQPEKIP 143 (335)
Q Consensus 74 ~~~~~~-----~~~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~-~~~~v~~Ss~~vyg~~~~~~ 143 (335)
+++++. .++|++||+||........++++.++++|+.++.++++++.. .+ ..+||++||...+....
T Consensus 90 ~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~--- 166 (278)
T 3sx2_A 90 SAALQAGLDELGRLDIVVANAGIAPMSAGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGVG--- 166 (278)
T ss_dssp HHHHHHHHHHHCCCCEEEECCCCCCCSSTHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCC---
T ss_pred HHHHHHHHHHcCCCCEEEECCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccHHhcCCCc---
Confidence 988875 389999999998654445677889999999999999998643 22 46899999977542210
Q ss_pred ccCCCCCCCCChhHHhHHHHHHHHHHHHhhCC--CCeEEEEecccccCC
Q 019795 144 CVEDFPYGAMNPYGRTKQWCEEIAFDVQKADP--EWRIILLRYFNPVGA 190 (335)
Q Consensus 144 ~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~--~~~~~~lR~~~v~G~ 190 (335)
.+..+...|+.||...+.+++.++.++. ++++.+++|+.|.++
T Consensus 167 ----~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~ 211 (278)
T 3sx2_A 167 ----SADPGSVGYVAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETP 211 (278)
T ss_dssp ----CSSHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSST
T ss_pred ----cCCCCchHhHHHHHHHHHHHHHHHHHHhccCcEEEEEecCCccCc
Confidence 1122345799999999999998887742 699999999999887
|
| >3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=6.7e-24 Score=184.12 Aligned_cols=175 Identities=14% Similarity=0.094 Sum_probs=136.2
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecC-CCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc-
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNL-HNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~- 79 (335)
+++|+||||||+|+||++++++|+++|++|++++|+ ........+.+... ..++.++.+|++|+++++++++.
T Consensus 5 l~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~ 79 (258)
T 3afn_B 5 LKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRAD-----GGDAAFFAADLATSEACQQLVDEF 79 (258)
T ss_dssp GTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHT-----TCEEEEEECCTTSHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhc-----CCceEEEECCCCCHHHHHHHHHHH
Confidence 467899999999999999999999999999999998 55544444444322 15788999999999999988874
Q ss_pred ----CCCCEEEEcccc-cc----hhhhhcChHHHHHHhHHHHHHHHHHHHH----cC--C---CEEEEeccccccCCCCC
Q 019795 80 ----QKFEAVIHFGAL-KA----VAESVQHPFRYFDNNLIGTINLYQAMAK----YN--C---KKLVFSSSATIYGQPEK 141 (335)
Q Consensus 80 ----~~~d~vi~~a~~-~~----~~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~--~---~~~v~~Ss~~vyg~~~~ 141 (335)
.++|+|||+|+. .. ...+.+.++..+++|+.++.++++++.. .+ . +++|++||...+..
T Consensus 80 ~~~~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~--- 156 (258)
T 3afn_B 80 VAKFGGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTG--- 156 (258)
T ss_dssp HHHHSSCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTHHHHC---
T ss_pred HHHcCCCCEEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchhhccC---
Confidence 279999999996 22 1223445678899999999999997643 22 2 68999999776531
Q ss_pred CCccCCCCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCCC
Q 019795 142 IPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGAH 191 (335)
Q Consensus 142 ~~~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~~ 191 (335)
+..+...|+.+|...|.+++.++.+. .++++.++||+.++++.
T Consensus 157 -------~~~~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~ 201 (258)
T 3afn_B 157 -------GGPGAGLYGAAKAFLHNVHKNWVDFHTKDGVRFNIVSPGTVDTAF 201 (258)
T ss_dssp -------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSGG
T ss_pred -------CCCCchHHHHHHHHHHHHHHHHHHhhcccCeEEEEEeCCCccccc
Confidence 22345689999999999999877653 27999999999999873
|
| >3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=99.91 E-value=9.5e-24 Score=184.19 Aligned_cols=174 Identities=20% Similarity=0.187 Sum_probs=139.4
Q ss_pred CCCCeEEEEcCCC-hhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc-
Q 019795 2 ASEKNILVTGGAG-FIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS- 79 (335)
Q Consensus 2 ~~~~~vlItGatG-~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~- 79 (335)
+++|++|||||+| .||++++++|+++|++|++++|+........+.+.... ..++.++.+|++|+++++++++.
T Consensus 20 l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~----~~~~~~~~~Dl~~~~~v~~~~~~~ 95 (266)
T 3o38_A 20 LKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLG----LGRVEAVVCDVTSTEAVDALITQT 95 (266)
T ss_dssp TTTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTC----SSCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcC----CCceEEEEeCCCCHHHHHHHHHHH
Confidence 5678999999997 69999999999999999999998666555555554332 25799999999999999988875
Q ss_pred ----CCCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHHHHc-----CCCEEEEeccccccCCCCCCCccC
Q 019795 80 ----QKFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAMAKY-----NCKKLVFSSSATIYGQPEKIPCVE 146 (335)
Q Consensus 80 ----~~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~~-----~~~~~v~~Ss~~vyg~~~~~~~~e 146 (335)
.++|+|||+||.... ..+.++++..+++|+.++.++++++... +..+||++||...+.
T Consensus 96 ~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~--------- 166 (266)
T 3o38_A 96 VEKAGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWR--------- 166 (266)
T ss_dssp HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECCGGGTC---------
T ss_pred HHHhCCCcEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHcC---------
Confidence 379999999997432 2245567789999999999999987653 446899999977652
Q ss_pred CCCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 147 DFPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 147 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
+..+...|+.+|.+.+.+++.++.+. .++++.+++|+.|..+
T Consensus 167 --~~~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~ 210 (266)
T 3o38_A 167 --AQHSQSHYAAAKAGVMALTRCSAIEAVEFGVRINAVSPSIARHK 210 (266)
T ss_dssp --CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC-
T ss_pred --CCCCCchHHHHHHHHHHHHHHHHHHHHHcCcEEEEEeCCcccch
Confidence 33456789999999999999888762 2799999999988776
|
| >3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.91 E-value=6e-24 Score=185.24 Aligned_cols=172 Identities=14% Similarity=0.150 Sum_probs=138.9
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
+++|++|||||+|+||++++++|+++|++|++++|+........+.+... ..++.++.+|++|+++++++++.
T Consensus 9 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~ 83 (264)
T 3ucx_A 9 LTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDT-----GRRALSVGTDITDDAQVAHLVDETM 83 (264)
T ss_dssp TTTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-----TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred cCCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhc-----CCcEEEEEcCCCCHHHHHHHHHHHH
Confidence 56799999999999999999999999999999999765555555544432 25788999999999999888875
Q ss_pred ---CCCCEEEEcccccc-----hhhhhcChHHHHHHhHHHHHHHHHHHHH----cCCCEEEEeccccccCCCCCCCccCC
Q 019795 80 ---QKFEAVIHFGALKA-----VAESVQHPFRYFDNNLIGTINLYQAMAK----YNCKKLVFSSSATIYGQPEKIPCVED 147 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~-----~~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~v~~Ss~~vyg~~~~~~~~e~ 147 (335)
.++|++||+|+... ...+.++++..+++|+.++.++++++.. .+ .+||++||...+.
T Consensus 84 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~---------- 152 (264)
T 3ucx_A 84 KAYGRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEESK-GAVVNVNSMVVRH---------- 152 (264)
T ss_dssp HHTSCCSEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHT-CEEEEECCGGGGC----------
T ss_pred HHcCCCcEEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEECcchhcc----------
Confidence 38999999998631 1234567778999999999999998643 34 6999999977652
Q ss_pred CCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 148 FPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 148 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
+..+...|+.||...+.+++.++.+. .++++.+++|+.|+++
T Consensus 153 -~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~ 196 (264)
T 3ucx_A 153 -SQAKYGAYKMAKSALLAMSQTLATELGEKGIRVNSVLPGYIWGG 196 (264)
T ss_dssp -CCTTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEESSCBSH
T ss_pred -CCCccHHHHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccc
Confidence 33445689999999999999888772 2899999999999876
|
| >4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.91 E-value=5.6e-24 Score=186.61 Aligned_cols=170 Identities=13% Similarity=0.097 Sum_probs=135.4
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
+++|++|||||+|+||+++++.|+++|++|++++|+........+.+ ..++.++.+|++|+++++++++.
T Consensus 25 l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~--------~~~~~~~~~Dv~d~~~v~~~~~~~~ 96 (277)
T 4dqx_A 25 LNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEI--------GSKAFGVRVDVSSAKDAESMVEKTT 96 (277)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH--------CTTEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh--------CCceEEEEecCCCHHHHHHHHHHHH
Confidence 45689999999999999999999999999999998754333332221 15788999999999999888875
Q ss_pred ---CCCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHHHH----cCCCEEEEeccccccCCCCCCCccCCC
Q 019795 80 ---QKFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAMAK----YNCKKLVFSSSATIYGQPEKIPCVEDF 148 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~v~~Ss~~vyg~~~~~~~~e~~ 148 (335)
.++|++||+||.... ..+.++++..+++|+.++.++++++.. .+.++||++||...+.
T Consensus 97 ~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~----------- 165 (277)
T 4dqx_A 97 AKWGRVDVLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSYTATS----------- 165 (277)
T ss_dssp HHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECCGGGTS-----------
T ss_pred HHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECchhhCc-----------
Confidence 379999999997432 234566778999999999999998753 3446999999987652
Q ss_pred CCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 149 PYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 149 ~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
+..+...|+.||...+.+++.++.++ .++++.+++|+.|..+
T Consensus 166 ~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~ 209 (277)
T 4dqx_A 166 AIADRTAYVASKGAISSLTRAMAMDHAKEGIRVNAVAPGTIDSP 209 (277)
T ss_dssp CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCH
T ss_pred CCCCChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCc
Confidence 33445689999999999999888764 2789999999988665
|
| >3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.91 E-value=8.8e-24 Score=184.11 Aligned_cols=169 Identities=17% Similarity=0.052 Sum_probs=132.9
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc---
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS--- 79 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~--- 79 (335)
++|++|||||+|+||++++++|+++|++|++++|+........+.+ . .++.++.+|++|++++.++++.
T Consensus 11 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~----~~~~~~~~D~~d~~~v~~~~~~~~~ 82 (263)
T 3ak4_A 11 SGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGL----E----NGGFAVEVDVTKRASVDAAMQKAID 82 (263)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTC----T----TCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH----h----cCCeEEEEeCCCHHHHHHHHHHHHH
Confidence 4589999999999999999999999999999998654322222211 1 3578899999999999888874
Q ss_pred --CCCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHHHH----cC-CCEEEEeccccccCCCCCCCccCCC
Q 019795 80 --QKFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAMAK----YN-CKKLVFSSSATIYGQPEKIPCVEDF 148 (335)
Q Consensus 80 --~~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~-~~~~v~~Ss~~vyg~~~~~~~~e~~ 148 (335)
.++|+|||+||.... ..+.++++..+++|+.++.++++++.. .+ .++||++||...+.
T Consensus 83 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~----------- 151 (263)
T 3ak4_A 83 ALGGFDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKV----------- 151 (263)
T ss_dssp HHTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTS-----------
T ss_pred HcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEeccccccc-----------
Confidence 379999999997432 224456778999999999999998654 34 57999999977652
Q ss_pred CCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 149 PYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 149 ~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
+..+...|+.+|...+.+++.++.+. .++++.++||+.++++
T Consensus 152 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~ 195 (263)
T 3ak4_A 152 GAPLLAHYSASKFAVFGWTQALAREMAPKNIRVNCVCPGFVKTA 195 (263)
T ss_dssp CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBTTH
T ss_pred CCCCchhHHHHHHHHHHHHHHHHHHHhHcCeEEEEEecccccCh
Confidence 22345689999999999999887763 2899999999999886
|
| >3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.91 E-value=6e-24 Score=184.96 Aligned_cols=174 Identities=17% Similarity=0.172 Sum_probs=140.2
Q ss_pred CCCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc-
Q 019795 1 MASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS- 79 (335)
Q Consensus 1 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~- 79 (335)
|+++|++|||||+|+||+++++.|+++|++|++++|+........+.+... ...+.++.+|++|+++++++++.
T Consensus 1 Ml~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~-----~~~~~~~~~Dv~d~~~v~~~~~~~ 75 (264)
T 3tfo_A 1 MVMDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDA-----GGTALAQVLDVTDRHSVAAFAQAA 75 (264)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHT-----TCEEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc-----CCcEEEEEcCCCCHHHHHHHHHHH
Confidence 889999999999999999999999999999999999766555555544432 15688899999999999888774
Q ss_pred ----CCCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHHH----HcCCCEEEEeccccccCCCCCCCccCC
Q 019795 80 ----QKFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAMA----KYNCKKLVFSSSATIYGQPEKIPCVED 147 (335)
Q Consensus 80 ----~~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~v~~Ss~~vyg~~~~~~~~e~ 147 (335)
.++|++||+||.... ..+.++++..+++|+.++.++++++. +.+.++||++||...+.
T Consensus 76 ~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~---------- 145 (264)
T 3tfo_A 76 VDTWGRIDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQRSGQIINIGSIGALS---------- 145 (264)
T ss_dssp HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTC----------
T ss_pred HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEEcCHHHcc----------
Confidence 389999999997432 22456677899999999999988864 34557999999977652
Q ss_pred CCCCCCChhHHhHHHHHHHHHHHHhhCCCCeEEEEecccccCC
Q 019795 148 FPYGAMNPYGRTKQWCEEIAFDVQKADPEWRIILLRYFNPVGA 190 (335)
Q Consensus 148 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~lR~~~v~G~ 190 (335)
+......|+.||...+.+++.++.+.+++++.+++|+.|..+
T Consensus 146 -~~~~~~~Y~asKaal~~l~~~la~e~~gIrvn~v~PG~v~T~ 187 (264)
T 3tfo_A 146 -VVPTAAVYCATKFAVRAISDGLRQESTNIRVTCVNPGVVESE 187 (264)
T ss_dssp -CCTTCHHHHHHHHHHHHHHHHHHHHCSSEEEEEEEECCC---
T ss_pred -cCCCChhHHHHHHHHHHHHHHHHHhCCCCEEEEEecCCCcCc
Confidence 233456799999999999999998877999999999988654
|
| >4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=1e-24 Score=191.41 Aligned_cols=175 Identities=16% Similarity=0.100 Sum_probs=139.9
Q ss_pred CCCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc-
Q 019795 1 MASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS- 79 (335)
Q Consensus 1 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~- 79 (335)
++++|++|||||+|+||+++++.|+++|++|++++|+..........+....+ .++.++.+|++|+++++++++.
T Consensus 24 ~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~----~~~~~~~~Dv~~~~~v~~~~~~~ 99 (277)
T 4fc7_A 24 LLRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATG----RRCLPLSMDVRAPPAVMAAVDQA 99 (277)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHS----SCEEEEECCTTCHHHHHHHHHHH
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcC----CcEEEEEcCCCCHHHHHHHHHHH
Confidence 36789999999999999999999999999999999976555554444433222 5789999999999999888875
Q ss_pred ----CCCCEEEEcccccc----hhhhhcChHHHHHHhHHHHHHHHHHHHH----cCCCEEEEeccccccCCCCCCCccCC
Q 019795 80 ----QKFEAVIHFGALKA----VAESVQHPFRYFDNNLIGTINLYQAMAK----YNCKKLVFSSSATIYGQPEKIPCVED 147 (335)
Q Consensus 80 ----~~~d~vi~~a~~~~----~~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~v~~Ss~~vyg~~~~~~~~e~ 147 (335)
.++|++||+||... ...+.++++..+++|+.++.++++++.. .+.++||++||...+.
T Consensus 100 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~---------- 169 (277)
T 4fc7_A 100 LKEFGRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDHGGVIVNITATLGNR---------- 169 (277)
T ss_dssp HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCSHHHH----------
T ss_pred HHHcCCCCEEEECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCC----------
Confidence 38999999999632 2234567788999999999999998743 3346999999976552
Q ss_pred CCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 148 FPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 148 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
+......|+.||...+.+++.++.++ .++++.+++|+.|.++
T Consensus 170 -~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~ 213 (277)
T 4fc7_A 170 -GQALQVHAGSAKAAVDAMTRHLAVEWGPQNIRVNSLAPGPISGT 213 (277)
T ss_dssp -TCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSSS
T ss_pred -CCCCcHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCEecc
Confidence 23345689999999999999888774 2799999999999875
|
| >3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.91 E-value=6.6e-24 Score=183.80 Aligned_cols=171 Identities=17% Similarity=0.110 Sum_probs=124.9
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
+++|+||||||+|+||++++++|+++|++|++++|+........+.+... ...+.++.+|++|+++++++++.
T Consensus 7 ~~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~ 81 (253)
T 3qiv_A 7 FENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVAD-----GGTAISVAVDVSDPESAKAMADRTL 81 (253)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-----TCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc-----CCcEEEEEccCCCHHHHHHHHHHHH
Confidence 46799999999999999999999999999999999766555544444332 25788999999999999988875
Q ss_pred ---CCCCEEEEcccccc---h----hhhhcChHHHHHHhHHHHHHHHHHH----HHcCCCEEEEeccccccCCCCCCCcc
Q 019795 80 ---QKFEAVIHFGALKA---V----AESVQHPFRYFDNNLIGTINLYQAM----AKYNCKKLVFSSSATIYGQPEKIPCV 145 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~---~----~~~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~v~~Ss~~vyg~~~~~~~~ 145 (335)
.++|+|||+||... . ..+.+.++..+++|+.++.++++++ ++.+.++||++||...|
T Consensus 82 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~--------- 152 (253)
T 3qiv_A 82 AEFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRGGGAIVNQSSTAAW--------- 152 (253)
T ss_dssp HHHSCCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECC-------------
T ss_pred HHcCCCCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEECCcccc---------
Confidence 38999999999731 1 1244566789999999988877775 34456799999998765
Q ss_pred CCCCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCCC
Q 019795 146 EDFPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGAH 191 (335)
Q Consensus 146 e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~~ 191 (335)
.+...|+.||...+.+++.++.++ .++++.+++|+.++++.
T Consensus 153 -----~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~ 195 (253)
T 3qiv_A 153 -----LYSNYYGLAKVGINGLTQQLSRELGGRNIRINAIAPGPIDTEA 195 (253)
T ss_dssp ------------CCHHHHHHHHHHHHHHTTTTTEEEEEEEC-------
T ss_pred -----CCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecCCcccc
Confidence 123469999999999999998885 27899999999998873
|
| >3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=5.3e-24 Score=188.17 Aligned_cols=174 Identities=13% Similarity=0.119 Sum_probs=137.7
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
+++|+||||||+|+||+++++.|+++|++|++++|+............+.. ..++.++.+|++|+++++++++.
T Consensus 45 l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~----~~~~~~~~~Dv~d~~~v~~~~~~~~ 120 (291)
T 3ijr_A 45 LKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKE----GVKCVLLPGDLSDEQHCKDIVQETV 120 (291)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTT----TCCEEEEESCTTSHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhc----CCcEEEEECCCCCHHHHHHHHHHHH
Confidence 467899999999999999999999999999999997543322222222211 25788999999999999888874
Q ss_pred ---CCCCEEEEcccccch-----hhhhcChHHHHHHhHHHHHHHHHHHHHc--CCCEEEEeccccccCCCCCCCccCCCC
Q 019795 80 ---QKFEAVIHFGALKAV-----AESVQHPFRYFDNNLIGTINLYQAMAKY--NCKKLVFSSSATIYGQPEKIPCVEDFP 149 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~~-----~~~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~ 149 (335)
.++|++||+||.... ..+.++++..+++|+.++.++++++... ..++||++||...+. +
T Consensus 121 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~-----------~ 189 (291)
T 3ijr_A 121 RQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTASIVAYE-----------G 189 (291)
T ss_dssp HHHSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECCTHHHH-----------C
T ss_pred HHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEechHhcC-----------C
Confidence 379999999996422 1245677889999999999999998765 235899999987763 2
Q ss_pred CCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 150 YGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 150 ~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
..+...|+.||...+.+++.++.++ .++++.+++|+.|+++
T Consensus 190 ~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~ 232 (291)
T 3ijr_A 190 NETLIDYSATKGAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTP 232 (291)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCST
T ss_pred CCCChhHHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCCCcCC
Confidence 3345689999999999999888764 2799999999999876
|
| >3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.91 E-value=2.2e-23 Score=180.13 Aligned_cols=170 Identities=15% Similarity=0.095 Sum_probs=130.8
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcC-
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQ- 80 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~- 80 (335)
.++|+||||||+|+||+++++.|+++|++|++++|+........+.+ ...+.++.+|+++.+++.+++++.
T Consensus 12 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~--------~~~~~~~~~D~~~~~~~~~~~~~~~ 83 (249)
T 3f9i_A 12 LTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNAL--------KDNYTIEVCNLANKEECSNLISKTS 83 (249)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH--------CSSEEEEECCTTSHHHHHHHHHTCS
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh--------ccCccEEEcCCCCHHHHHHHHHhcC
Confidence 46799999999999999999999999999999999654433332222 156889999999999999999864
Q ss_pred CCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHHH----HcCCCEEEEeccccccCCCCCCCccCCCCCCC
Q 019795 81 KFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAMA----KYNCKKLVFSSSATIYGQPEKIPCVEDFPYGA 152 (335)
Q Consensus 81 ~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~ 152 (335)
++|+|||+||.... ..+.++++..+++|+.++.++++++. +.+.++||++||...+. +..+
T Consensus 84 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~~ 152 (249)
T 3f9i_A 84 NLDILVCNAGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKRYGRIINISSIVGIA-----------GNPG 152 (249)
T ss_dssp CCSEEEECCC-------------CHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCC-------------CCSC
T ss_pred CCCEEEECCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEccHHhcc-----------CCCC
Confidence 79999999997532 23456788999999999999998864 34557999999977652 2334
Q ss_pred CChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 153 MNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 153 ~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
...|+.||.+.+.+++.++.++ .++++.+++|+.|.++
T Consensus 153 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~ 192 (249)
T 3f9i_A 153 QANYCASKAGLIGMTKSLSYEVATRGITVNAVAPGFIKSD 192 (249)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBC--
T ss_pred CchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCccccC
Confidence 5689999999999999888763 2799999999999776
|
| >3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A | Back alignment and structure |
|---|
Probab=99.91 E-value=2e-23 Score=180.69 Aligned_cols=173 Identities=20% Similarity=0.237 Sum_probs=136.6
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccC--CCHHHHHHHHhc
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDL--RNKDDLDKLFSS 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl--~d~~~~~~~~~~ 79 (335)
+++|++|||||+|+||+++++.|+++|++|++++|+........+.+..... ..+.++.+|+ +|+++++++++.
T Consensus 10 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~ 85 (252)
T 3f1l_A 10 LNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETG----RQPQWFILDLLTCTSENCQQLAQR 85 (252)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHS----CCCEEEECCTTTCCHHHHHHHHHH
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcC----CCceEEEEecccCCHHHHHHHHHH
Confidence 5678999999999999999999999999999999976655555555443322 4678999999 899888887764
Q ss_pred -----CCCCEEEEcccccc-----hhhhhcChHHHHHHhHHHHHHHHHHHH----HcCCCEEEEeccccccCCCCCCCcc
Q 019795 80 -----QKFEAVIHFGALKA-----VAESVQHPFRYFDNNLIGTINLYQAMA----KYNCKKLVFSSSATIYGQPEKIPCV 145 (335)
Q Consensus 80 -----~~~d~vi~~a~~~~-----~~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~v~~Ss~~vyg~~~~~~~~ 145 (335)
.++|++||+||... ...+.++++..+++|+.++.++++++. +.+.++||++||...+.
T Consensus 86 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~-------- 157 (252)
T 3f1l_A 86 IAVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQ-------- 157 (252)
T ss_dssp HHHHCSCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGTS--------
T ss_pred HHHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCCCCEEEEECChhhcc--------
Confidence 37999999999732 223445667899999999999999874 44567999999977542
Q ss_pred CCCCCCCCChhHHhHHHHHHHHHHHHhhCC-CCeEEEEecccccC
Q 019795 146 EDFPYGAMNPYGRTKQWCEEIAFDVQKADP-EWRIILLRYFNPVG 189 (335)
Q Consensus 146 e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~-~~~~~~lR~~~v~G 189 (335)
+..+...|+.||...+.+++.++.++. .+++.++.|+.|..
T Consensus 158 ---~~~~~~~Y~asK~a~~~l~~~la~e~~~~irvn~v~PG~v~t 199 (252)
T 3f1l_A 158 ---GRANWGAYAASKFATEGMMQVLADEYQQRLRVNCINPGGTRT 199 (252)
T ss_dssp ---CCTTCHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECCSBSS
T ss_pred ---CCCCCchhHHHHHHHHHHHHHHHHHhcCCcEEEEEecCcccC
Confidence 233456899999999999999998863 37888888887644
|
| >1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=1.4e-23 Score=184.16 Aligned_cols=174 Identities=17% Similarity=0.148 Sum_probs=134.2
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEec-CCCCchhhHHhhhhhcCCccccceeEEEccCCCH----HHHHHH
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDN-LHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNK----DDLDKL 76 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~----~~~~~~ 76 (335)
|++|++|||||+|+||+++++.|+++|++|++++| +........+.+....+ ..+.++.+|++|. +++.++
T Consensus 9 ~~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~----~~~~~~~~Dl~~~~~~~~~~~~~ 84 (276)
T 1mxh_A 9 SECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARA----GSAVLCKGDLSLSSSLLDCCEDI 84 (276)
T ss_dssp --CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHST----TCEEEEECCCSSSTTHHHHHHHH
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhcC----CceEEEeccCCCccccHHHHHHH
Confidence 45689999999999999999999999999999998 54433333333332211 5688999999999 888888
Q ss_pred Hhc-----CCCCEEEEcccccchh----hhh-----------cChHHHHHHhHHHHHHHHHHHHHc---CC------CEE
Q 019795 77 FSS-----QKFEAVIHFGALKAVA----ESV-----------QHPFRYFDNNLIGTINLYQAMAKY---NC------KKL 127 (335)
Q Consensus 77 ~~~-----~~~d~vi~~a~~~~~~----~~~-----------~~~~~~~~~nv~~~~~l~~~~~~~---~~------~~~ 127 (335)
++. .++|+|||+||..... .+. +.++..+++|+.++.++++++... +. ++|
T Consensus 85 ~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~g~i 164 (276)
T 1mxh_A 85 IDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSV 164 (276)
T ss_dssp HHHHHHHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEE
T ss_pred HHHHHHhcCCCCEEEECCCCCCCCCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHhcCCCCCCCCcEE
Confidence 764 3799999999974321 122 556789999999999999998763 33 699
Q ss_pred EEeccccccCCCCCCCccCCCCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 128 VFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 128 v~~Ss~~vyg~~~~~~~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
|++||...+. +..+...|+.||...+.+++.++.+. .++++.+++|+.++++
T Consensus 165 v~isS~~~~~-----------~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~PG~v~t~ 218 (276)
T 1mxh_A 165 VNLCDAMTDL-----------PLPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLP 218 (276)
T ss_dssp EEECCGGGGS-----------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCC
T ss_pred EEECchhhcC-----------CCCCCeehHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCC
Confidence 9999987662 23445689999999999999887663 2799999999999887
|
| >1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A | Back alignment and structure |
|---|
Probab=99.91 E-value=1.2e-23 Score=181.83 Aligned_cols=172 Identities=16% Similarity=0.140 Sum_probs=134.0
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
+++|+||||||+|+||+++++.|+++|++|++++|+........+.+.. ..++.++.+|++|++++.++++.
T Consensus 4 ~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~------~~~~~~~~~D~~~~~~~~~~~~~~~ 77 (251)
T 1zk4_A 4 LDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGT------PDQIQFFQHDSSDEDGWTKLFDATE 77 (251)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC------TTTEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhc------cCceEEEECCCCCHHHHHHHHHHHH
Confidence 4678999999999999999999999999999999965433322222211 14688999999999999988874
Q ss_pred ---CCCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHHH----HcCC-CEEEEeccccccCCCCCCCccCC
Q 019795 80 ---QKFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAMA----KYNC-KKLVFSSSATIYGQPEKIPCVED 147 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~-~~~v~~Ss~~vyg~~~~~~~~e~ 147 (335)
.++|+|||+||.... ..+.+.++..+++|+.++.++++++. +.+. ++||++||...+.
T Consensus 78 ~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~---------- 147 (251)
T 1zk4_A 78 KAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFV---------- 147 (251)
T ss_dssp HHHSSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTS----------
T ss_pred HHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCCchhcc----------
Confidence 369999999997432 12345567899999999988877754 3455 6999999987663
Q ss_pred CCCCCCChhHHhHHHHHHHHHHHHhh----CCCCeEEEEecccccCC
Q 019795 148 FPYGAMNPYGRTKQWCEEIAFDVQKA----DPEWRIILLRYFNPVGA 190 (335)
Q Consensus 148 ~~~~~~~~Y~~sK~~~E~~~~~~~~~----~~~~~~~~lR~~~v~G~ 190 (335)
+..+...|+.+|...|.+++.++.+ ..++++.++||+.++++
T Consensus 148 -~~~~~~~Y~~sK~a~~~~~~~~a~e~~~~~~~i~v~~v~Pg~v~t~ 193 (251)
T 1zk4_A 148 -GDPSLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTP 193 (251)
T ss_dssp -CCTTCHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCH
T ss_pred -CCCCCccchHHHHHHHHHHHHHHHHhcccCCCeEEEEEeeCcCcch
Confidence 2234568999999999999887754 33899999999999887
|
| >2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=1.2e-23 Score=183.03 Aligned_cols=173 Identities=14% Similarity=0.066 Sum_probs=136.0
Q ss_pred CCCCeEEEEcCC--ChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc
Q 019795 2 ASEKNILVTGGA--GFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS 79 (335)
Q Consensus 2 ~~~~~vlItGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~ 79 (335)
+++|++|||||+ |+||+++++.|+++|++|++++|+.. .....+.+.+.. ..+.++.+|++|+++++++++.
T Consensus 6 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~-----~~~~~~~~D~~~~~~v~~~~~~ 79 (261)
T 2wyu_A 6 LSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAER-LRPEAEKLAEAL-----GGALLFRADVTQDEELDALFAG 79 (261)
T ss_dssp CTTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGG-GHHHHHHHHHHT-----TCCEEEECCTTCHHHHHHHHHH
T ss_pred CCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHH-HHHHHHHHHHhc-----CCcEEEECCCCCHHHHHHHHHH
Confidence 467899999999 99999999999999999999999753 222333333221 2378899999999999888774
Q ss_pred -----CCCCEEEEcccccch--------hhhhcChHHHHHHhHHHHHHHHHHHHHc--CCCEEEEeccccccCCCCCCCc
Q 019795 80 -----QKFEAVIHFGALKAV--------AESVQHPFRYFDNNLIGTINLYQAMAKY--NCKKLVFSSSATIYGQPEKIPC 144 (335)
Q Consensus 80 -----~~~d~vi~~a~~~~~--------~~~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~v~~Ss~~vyg~~~~~~~ 144 (335)
.++|+|||+||.... ..+.++++..+++|+.++.++++++... +.++||++||...+.
T Consensus 80 ~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~------- 152 (261)
T 2wyu_A 80 VKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEK------- 152 (261)
T ss_dssp HHHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTS-------
T ss_pred HHHHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhccCCEEEEEecccccC-------
Confidence 379999999997532 2245667789999999999999998765 125899999976542
Q ss_pred cCCCCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCCC
Q 019795 145 VEDFPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGAH 191 (335)
Q Consensus 145 ~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~~ 191 (335)
+..+...|+.||...+.+++.++.++ .++++.+++|+.|+++.
T Consensus 153 ----~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 197 (261)
T 2wyu_A 153 ----VVPKYNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVA 197 (261)
T ss_dssp ----BCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCTG
T ss_pred ----CCCCchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCCCcCch
Confidence 22344579999999999999887663 27999999999998873
|
| >1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.91 E-value=1.2e-23 Score=184.24 Aligned_cols=172 Identities=17% Similarity=0.109 Sum_probs=135.0
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEec-CCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc-
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDN-LHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~- 79 (335)
+++|+||||||+|+||++++++|+++|++|++++| +........+.+... ..++.++.+|++|++++.++++.
T Consensus 19 ~~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~-----~~~~~~~~~D~~~~~~~~~~~~~~ 93 (274)
T 1ja9_A 19 LAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKL-----GAQGVAIQADISKPSEVVALFDKA 93 (274)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT-----TCCEEEEECCTTSHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhc-----CCcEEEEEecCCCHHHHHHHHHHH
Confidence 45789999999999999999999999999999998 332222222333221 15688999999999999888864
Q ss_pred ----CCCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHHHHc---CCCEEEEecccccc-CCCCCCCccCC
Q 019795 80 ----QKFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAMAKY---NCKKLVFSSSATIY-GQPEKIPCVED 147 (335)
Q Consensus 80 ----~~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~~v~~Ss~~vy-g~~~~~~~~e~ 147 (335)
.++|+|||+|+.... ..+.++++..+++|+.++.++++++... + ++||++||...+ ..
T Consensus 94 ~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~iv~~sS~~~~~~~--------- 163 (274)
T 1ja9_A 94 VSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRG-GRIILTSSIAAVMTG--------- 163 (274)
T ss_dssp HHHHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEE-EEEEEECCGGGTCCS---------
T ss_pred HHHcCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhC-CEEEEEcChHhccCC---------
Confidence 379999999997432 2234566789999999999999998764 4 699999998776 21
Q ss_pred CCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 148 FPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 148 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
..+...|+.+|...|.+++.++.++ .++++.++||+.++++
T Consensus 164 --~~~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~ 206 (274)
T 1ja9_A 164 --IPNHALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTD 206 (274)
T ss_dssp --CCSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSH
T ss_pred --CCCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccccc
Confidence 2334579999999999999887763 3899999999999876
|
| >3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=99.91 E-value=3.6e-24 Score=187.17 Aligned_cols=173 Identities=14% Similarity=0.047 Sum_probs=137.6
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
+++|++|||||+|+||+++++.|+++|++|++++|+..........+.... .++.++.+|++|+++++++++.
T Consensus 26 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~-----~~~~~~~~Dv~d~~~v~~~~~~~~ 100 (270)
T 3ftp_A 26 LDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAG-----LEGRGAVLNVNDATAVDALVESTL 100 (270)
T ss_dssp TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHT-----CCCEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-----CcEEEEEEeCCCHHHHHHHHHHHH
Confidence 456899999999999999999999999999999997655544444443321 4678899999999999988875
Q ss_pred ---CCCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHHHH----cCCCEEEEeccccccCCCCCCCccCCC
Q 019795 80 ---QKFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAMAK----YNCKKLVFSSSATIYGQPEKIPCVEDF 148 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~v~~Ss~~vyg~~~~~~~~e~~ 148 (335)
.++|++||+||.... ..+.++++..+++|+.++.++++++.. .+..+||++||...+.
T Consensus 101 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~----------- 169 (270)
T 3ftp_A 101 KEFGALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKARGGRIVNITSVVGSA----------- 169 (270)
T ss_dssp HHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHH-----------
T ss_pred HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCC-----------
Confidence 379999999997432 224566778999999999999998653 3456899999976542
Q ss_pred CCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 149 PYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 149 ~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
+..+...|+.||...+.+++.++.++ .++++.+++|+.|..+
T Consensus 170 ~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~ 213 (270)
T 3ftp_A 170 GNPGQVNYAAAKAGVAGMTRALAREIGSRGITVNCVAPGFIDTD 213 (270)
T ss_dssp CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSH
T ss_pred CCCCchhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCc
Confidence 23345689999999999999888773 2799999999988765
|
| >3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.91 E-value=9.1e-24 Score=185.23 Aligned_cols=170 Identities=17% Similarity=0.085 Sum_probs=136.6
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
+++|++|||||+|+||+++++.|+++|++|++++|+........+.+ + .++.++.+|++|+++++++++.
T Consensus 27 l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~----~----~~~~~~~~Dv~d~~~v~~~~~~~~ 98 (277)
T 3gvc_A 27 LAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKI----G----CGAAACRVDVSDEQQIIAMVDACV 98 (277)
T ss_dssp CTTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH----C----SSCEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc----C----CcceEEEecCCCHHHHHHHHHHHH
Confidence 45789999999999999999999999999999998754433333322 1 5788999999999999888775
Q ss_pred ---CCCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHHHH----cCCCEEEEeccccccCCCCCCCccCCC
Q 019795 80 ---QKFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAMAK----YNCKKLVFSSSATIYGQPEKIPCVEDF 148 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~v~~Ss~~vyg~~~~~~~~e~~ 148 (335)
.++|++||+||.... ..+.++++..+++|+.++.++++++.. .+.++||++||...+.
T Consensus 99 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~----------- 167 (277)
T 3gvc_A 99 AAFGGVDKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQV----------- 167 (277)
T ss_dssp HHHSSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTS-----------
T ss_pred HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcc-----------
Confidence 389999999997432 234567778999999999999998654 4456899999976542
Q ss_pred CCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 149 PYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 149 ~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
+..+...|+.||...+.+++.++.+. .++++.+++|+.|+++
T Consensus 168 ~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~ 211 (277)
T 3gvc_A 168 AVGGTGAYGMSKAGIIQLSRITAAELRSSGIRSNTLLPAFVDTP 211 (277)
T ss_dssp CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCH
T ss_pred CCCCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCccCc
Confidence 33445689999999999999888763 2799999999999876
|
| >1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=1.5e-23 Score=181.60 Aligned_cols=170 Identities=19% Similarity=0.187 Sum_probs=134.0
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
+++|++|||||+|+||++++++|+++|++|++++|+........+.+ ...+.++.+|++|++++.++++.
T Consensus 3 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~--------~~~~~~~~~D~~~~~~~~~~~~~~~ 74 (254)
T 1hdc_A 3 LSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL--------GDAARYQHLDVTIEEDWQRVVAYAR 74 (254)
T ss_dssp CCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT--------GGGEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh--------CCceeEEEecCCCHHHHHHHHHHHH
Confidence 56899999999999999999999999999999999654332222221 14678899999999999888774
Q ss_pred ---CCCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHH----HHHcCCCEEEEeccccccCCCCCCCccCCC
Q 019795 80 ---QKFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQA----MAKYNCKKLVFSSSATIYGQPEKIPCVEDF 148 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~----~~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~ 148 (335)
.++|++||+||.... ..+.++++..+++|+.++.+++++ +++.+.++||++||...+.
T Consensus 75 ~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~----------- 143 (254)
T 1hdc_A 75 EEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLM----------- 143 (254)
T ss_dssp HHHSCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS-----------
T ss_pred HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhcc-----------
Confidence 379999999997432 224456778999999999876665 4455667999999987652
Q ss_pred CCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 149 PYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 149 ~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
+..+...|+.+|...+.+++.++.+. .++++.++||+.++++
T Consensus 144 ~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~ 187 (254)
T 1hdc_A 144 GLALTSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTP 187 (254)
T ss_dssp CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCH
T ss_pred CCCCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccCcCc
Confidence 22345689999999999999888763 2799999999999875
|
| >3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.91 E-value=1.8e-23 Score=183.89 Aligned_cols=177 Identities=17% Similarity=0.152 Sum_probs=135.4
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCC---------chhhHHhhhhhcCCccccceeEEEccCCCHHH
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNS---------VPEAVDRVKDLAGPELAKKLEFHVGDLRNKDD 72 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~---------~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~ 72 (335)
+++|++|||||+|+||++++++|+++|++|++++|+.+. ..+..+.+.+... ....++.++.+|++|+++
T Consensus 13 l~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dv~~~~~ 91 (280)
T 3pgx_A 13 LQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVE-DQGRKALTRVLDVRDDAA 91 (280)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHH-TTTCCEEEEECCTTCHHH
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHH-hcCCeEEEEEcCCCCHHH
Confidence 456899999999999999999999999999999985321 1111122111110 112578899999999999
Q ss_pred HHHHHhc-----CCCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHHHH----cC-CCEEEEeccccccCC
Q 019795 73 LDKLFSS-----QKFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAMAK----YN-CKKLVFSSSATIYGQ 138 (335)
Q Consensus 73 ~~~~~~~-----~~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~-~~~~v~~Ss~~vyg~ 138 (335)
+++++++ .++|++||+||.... ..+.++++..+++|+.++.++++++.. .+ ..+||++||...+.
T Consensus 92 v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~- 170 (280)
T 3pgx_A 92 LRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGLK- 170 (280)
T ss_dssp HHHHHHHHHHHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTS-
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEEcchhhcc-
Confidence 9988875 389999999997532 224566778999999999999998643 33 46899999977652
Q ss_pred CCCCCccCCCCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 139 PEKIPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 139 ~~~~~~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
+......|+.||...+.+++.++.+. .++++.+++|+.|+++
T Consensus 171 ----------~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~ 214 (280)
T 3pgx_A 171 ----------ATPGNGHYSASKHGLTALTNTLAIELGEYGIRVNSIHPYSVETP 214 (280)
T ss_dssp ----------CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCST
T ss_pred ----------CCCCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccCc
Confidence 23345689999999999999888772 2899999999999887
|
| >2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=99.91 E-value=1.2e-23 Score=181.69 Aligned_cols=174 Identities=14% Similarity=0.087 Sum_probs=135.8
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc---
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS--- 79 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~--- 79 (335)
++|++|||||+|+||++++++|+++|++|++++|+........+.+.. ..+.++.++.+|++|++++.++++.
T Consensus 1 ~~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~----~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 76 (250)
T 2cfc_A 1 MSRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWH----AYADKVLRVRADVADEGDVNAAIAATME 76 (250)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHST----TTGGGEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHH----hcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence 468999999999999999999999999999999975443333332211 1125688999999999999988874
Q ss_pred --CCCCEEEEcccccch-------hhhhcChHHHHHHhHHHHHHHHHHHH----HcCCCEEEEeccccccCCCCCCCccC
Q 019795 80 --QKFEAVIHFGALKAV-------AESVQHPFRYFDNNLIGTINLYQAMA----KYNCKKLVFSSSATIYGQPEKIPCVE 146 (335)
Q Consensus 80 --~~~d~vi~~a~~~~~-------~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~v~~Ss~~vyg~~~~~~~~e 146 (335)
.++|+|||+||.... ..+.++++..+++|+.++.++++++. +.+.+++|++||...+.
T Consensus 77 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~--------- 147 (250)
T 2cfc_A 77 QFGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQGAGVIVNIASVASLV--------- 147 (250)
T ss_dssp HHSCCCEEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS---------
T ss_pred HhCCCCEEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhcc---------
Confidence 379999999997432 12345677899999999988877754 34668999999987653
Q ss_pred CCCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCCC
Q 019795 147 DFPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGAH 191 (335)
Q Consensus 147 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~~ 191 (335)
+..+...|+.+|...|.+++.++.+. .++++.++||+.++++.
T Consensus 148 --~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~ 192 (250)
T 2cfc_A 148 --AFPGRSAYTTSKGAVLQLTKSVAVDYAGSGIRCNAVCPGMIETPM 192 (250)
T ss_dssp --CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTT
T ss_pred --CCCCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccCc
Confidence 22345689999999999999887663 28999999999999973
|
| >4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=99.91 E-value=9.1e-24 Score=184.71 Aligned_cols=173 Identities=15% Similarity=0.116 Sum_probs=138.7
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
+++|++|||||+|+||++++++|+++|++|++++|+........+.+... ..++.++.+|++|++++.++++.
T Consensus 24 l~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~-----~~~~~~~~~Dv~d~~~v~~~~~~~~ 98 (271)
T 4ibo_A 24 LGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNV-----GHDAEAVAFDVTSESEIIEAFARLD 98 (271)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHT-----TCCEEECCCCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-----CCceEEEEcCCCCHHHHHHHHHHHH
Confidence 45789999999999999999999999999999998765555554444332 25788999999999999988875
Q ss_pred ---CCCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHHHH----cCCCEEEEeccccccCCCCCCCccCCC
Q 019795 80 ---QKFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAMAK----YNCKKLVFSSSATIYGQPEKIPCVEDF 148 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~v~~Ss~~vyg~~~~~~~~e~~ 148 (335)
.++|++||+||.... ..+.++++..+++|+.++.++++++.. .+.++||++||...+.
T Consensus 99 ~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iV~isS~~~~~----------- 167 (271)
T 4ibo_A 99 EQGIDVDILVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRGYGKIVNIGSLTSEL----------- 167 (271)
T ss_dssp HHTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS-----------
T ss_pred HHCCCCCEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCC-----------
Confidence 379999999997432 234567778999999999999887643 3557999999976541
Q ss_pred CCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 149 PYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 149 ~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
+..+...|+.+|...+.+++.++.++ .++++.+++|+.|..+
T Consensus 168 ~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~ 211 (271)
T 4ibo_A 168 ARATVAPYTVAKGGIKMLTRAMAAEWAQYGIQANAIGPGYMLTD 211 (271)
T ss_dssp BCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSG
T ss_pred CCCCchhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeccEeCc
Confidence 33455689999999999999888773 2799999999998776
|
| >3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E | Back alignment and structure |
|---|
Probab=99.91 E-value=2e-23 Score=180.21 Aligned_cols=169 Identities=12% Similarity=0.050 Sum_probs=135.4
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc---
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS--- 79 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~--- 79 (335)
++|++|||||+|+||+++++.|+++|++|++++|+........+.+. .....+.+|++|+++++++++.
T Consensus 8 ~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~--------~~~~~~~~Dv~d~~~v~~~~~~~~~ 79 (248)
T 3op4_A 8 EGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLG--------DNGKGMALNVTNPESIEAVLKAITD 79 (248)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHG--------GGEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc--------ccceEEEEeCCCHHHHHHHHHHHHH
Confidence 46899999999999999999999999999999997554433333322 4577899999999999988875
Q ss_pred --CCCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHHHH----cCCCEEEEeccccccCCCCCCCccCCCC
Q 019795 80 --QKFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAMAK----YNCKKLVFSSSATIYGQPEKIPCVEDFP 149 (335)
Q Consensus 80 --~~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~v~~Ss~~vyg~~~~~~~~e~~~ 149 (335)
.++|++||+||.... ..+.++++..+++|+.++.++++++.. .+.++||++||...+. +
T Consensus 80 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~-----------~ 148 (248)
T 3op4_A 80 EFGGVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTM-----------G 148 (248)
T ss_dssp HHCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHH-----------C
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcC-----------C
Confidence 389999999997432 224567778999999999999998653 4557999999976541 3
Q ss_pred CCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 150 YGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 150 ~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
..+...|+.||...+.+++.++.++ .++++.+++|+.+..+
T Consensus 149 ~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~ 191 (248)
T 3op4_A 149 NAGQANYAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETD 191 (248)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSST
T ss_pred CCCChHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEeeCCCCCc
Confidence 3455689999999999999888763 2799999999988765
|
| >3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.91 E-value=5.1e-24 Score=187.95 Aligned_cols=188 Identities=19% Similarity=0.211 Sum_probs=138.6
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCc--------hhhHHhhhhhcCCccccceeEEEccCCCHHHH
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSV--------PEAVDRVKDLAGPELAKKLEFHVGDLRNKDDL 73 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~--------~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~ 73 (335)
+++|+||||||+|+||++++++|+++|++|++++|+.... ....+....... ....++.++.+|++|++++
T Consensus 8 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~v 86 (287)
T 3pxx_A 8 VQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVE-KTGRKAYTAEVDVRDRAAV 86 (287)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHH-HTTSCEEEEECCTTCHHHH
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHH-hcCCceEEEEccCCCHHHH
Confidence 4578999999999999999999999999999999873221 111111111000 1125788999999999999
Q ss_pred HHHHhc-----CCCCEEEEcccccchh--hhhcChHHHHHHhHHHHHHHHHHHHHc--CCCEEEEeccccccCCCCCCCc
Q 019795 74 DKLFSS-----QKFEAVIHFGALKAVA--ESVQHPFRYFDNNLIGTINLYQAMAKY--NCKKLVFSSSATIYGQPEKIPC 144 (335)
Q Consensus 74 ~~~~~~-----~~~d~vi~~a~~~~~~--~~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~v~~Ss~~vyg~~~~~~~ 144 (335)
.+++++ .++|++||+||..... .+.++++..+++|+.++.++++++... +..++|++||...+......+.
T Consensus 87 ~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~ 166 (287)
T 3pxx_A 87 SRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTGSVAGLIAAAQPPG 166 (287)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCHHHHHHHHCCC-
T ss_pred HHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEeccchhccccccccc
Confidence 888775 3899999999975322 345677889999999999999998765 3358999999776533222223
Q ss_pred cCCCCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 145 VEDFPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 145 ~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
.+..+..+...|+.+|...+.+++.++.++ .++++.+++|+.|..+
T Consensus 167 ~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~ 214 (287)
T 3pxx_A 167 AGGPQGPGGAGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTD 214 (287)
T ss_dssp ----CHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESSBSST
T ss_pred ccccCCCccchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCccccc
Confidence 333333445679999999999999888774 2799999999999886
|
| >2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=2e-23 Score=181.57 Aligned_cols=173 Identities=17% Similarity=0.096 Sum_probs=137.7
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
+++|++|||||+|+||++++++|+++|++|++++|+........+.+... ..++.++.+|++|+++++++++.
T Consensus 7 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~ 81 (260)
T 2ae2_A 7 LEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSK-----GFKVEASVCDLSSRSERQELMNTVA 81 (260)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-----TCEEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-----CCcEEEEEcCCCCHHHHHHHHHHHH
Confidence 46789999999999999999999999999999999755444333333321 14688999999999999888864
Q ss_pred ----CCCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHHH----HcCCCEEEEeccccccCCCCCCCccCC
Q 019795 80 ----QKFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAMA----KYNCKKLVFSSSATIYGQPEKIPCVED 147 (335)
Q Consensus 80 ----~~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~v~~Ss~~vyg~~~~~~~~e~ 147 (335)
.++|+|||+||.... ..+.++++..+++|+.++.++++++. +.+.++||++||...+.
T Consensus 82 ~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~---------- 151 (260)
T 2ae2_A 82 NHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGAL---------- 151 (260)
T ss_dssp HHTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTS----------
T ss_pred HHcCCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcc----------
Confidence 479999999997422 22445677899999999999999874 44567999999977652
Q ss_pred CCCCCCChhHHhHHHHHHHHHHHHhhCC--CCeEEEEecccccCC
Q 019795 148 FPYGAMNPYGRTKQWCEEIAFDVQKADP--EWRIILLRYFNPVGA 190 (335)
Q Consensus 148 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~~--~~~~~~lR~~~v~G~ 190 (335)
+..+...|+.||...+.+++.++.+.. ++++.+++|+.+.++
T Consensus 152 -~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~ 195 (260)
T 2ae2_A 152 -AVPYEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATS 195 (260)
T ss_dssp -CCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSH
T ss_pred -CCCCcchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCCCCCc
Confidence 233456899999999999999887752 789999999998765
|
| >3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.91 E-value=9.6e-24 Score=189.20 Aligned_cols=172 Identities=15% Similarity=0.113 Sum_probs=132.9
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecC----------CCCchhhHHhhhhhcCCccccceeEEEccCCCHH
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNL----------HNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKD 71 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~----------~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~ 71 (335)
+++|+||||||+|+||+++++.|+++|++|++++|+ ........+.+... ...+.++.+|++|++
T Consensus 25 l~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~Dv~d~~ 99 (322)
T 3qlj_A 25 VDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAA-----GGEAVADGSNVADWD 99 (322)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHT-----TCEEEEECCCTTSHH
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhc-----CCcEEEEECCCCCHH
Confidence 457899999999999999999999999999999986 22223333333322 256889999999999
Q ss_pred HHHHHHhc-----CCCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHHHHc----C------CCEEEEecc
Q 019795 72 DLDKLFSS-----QKFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAMAKY----N------CKKLVFSSS 132 (335)
Q Consensus 72 ~~~~~~~~-----~~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~~----~------~~~~v~~Ss 132 (335)
++.++++. .++|++||+||.... ..+.++++..+++|+.++.++++++... + -.+||++||
T Consensus 100 ~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~IV~isS 179 (322)
T 3qlj_A 100 QAAGLIQTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSS 179 (322)
T ss_dssp HHHHHHHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEECC
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCCcEEEEEcC
Confidence 99888875 389999999997432 2345677789999999999999986432 1 148999999
Q ss_pred ccccCCCCCCCccCCCCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 133 ATIYGQPEKIPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 133 ~~vyg~~~~~~~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
...+. +..+...|+.||...+.+++.++.++ .++++.+++|+ +..+
T Consensus 180 ~~~~~-----------~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG-~~t~ 227 (322)
T 3qlj_A 180 GAGLQ-----------GSVGQGNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAPS-ARTR 227 (322)
T ss_dssp HHHHH-----------CBTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-TTSC
T ss_pred HHHcc-----------CCCCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEecCC-CCCc
Confidence 76542 23345689999999999999888773 27999999998 6443
|
| >3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.91 E-value=1.5e-23 Score=183.53 Aligned_cols=172 Identities=16% Similarity=0.124 Sum_probs=135.8
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
+++|++|||||+|+||++++++|+++|++|++++|. ....+..+.+... ...+.++.+|++|.+++.++.+.
T Consensus 29 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~-~~~~~~~~~~~~~-----~~~~~~~~~Dv~d~~~v~~~~~~~~ 102 (273)
T 3uf0_A 29 LAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRT-DGVKEVADEIADG-----GGSAEAVVADLADLEGAANVAEELA 102 (273)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS-THHHHHHHHHHTT-----TCEEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCH-HHHHHHHHHHHhc-----CCcEEEEEecCCCHHHHHHHHHHHH
Confidence 457899999999999999999999999999999964 3233333333321 25788999999999988877543
Q ss_pred --CCCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHHH----HcCCCEEEEeccccccCCCCCCCccCCCC
Q 019795 80 --QKFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAMA----KYNCKKLVFSSSATIYGQPEKIPCVEDFP 149 (335)
Q Consensus 80 --~~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~ 149 (335)
.++|++||+||.... ..+.++++..+++|+.++.++++++. +.+.++||++||...+. +
T Consensus 103 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~-----------~ 171 (273)
T 3uf0_A 103 ATRRVDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHGSGRIVTIASMLSFQ-----------G 171 (273)
T ss_dssp HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS-----------C
T ss_pred hcCCCcEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchHhcC-----------C
Confidence 489999999997432 22456677899999999999999863 44567999999977652 3
Q ss_pred CCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 150 YGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 150 ~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
..+...|+.||...+.+++.++.+. .++++.+++|+.|+++
T Consensus 172 ~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~ 214 (273)
T 3uf0_A 172 GRNVAAYAASKHAVVGLTRALASEWAGRGVGVNALAPGYVVTA 214 (273)
T ss_dssp CSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSG
T ss_pred CCCChhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCC
Confidence 3445689999999999999988773 2799999999999876
|
| >1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=1.5e-23 Score=182.24 Aligned_cols=170 Identities=16% Similarity=0.094 Sum_probs=134.2
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
+++|++|||||+|+||++++++|+++|++|++++|+........+.+. ..+.++.+|++|++++.++++.
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~--------~~~~~~~~D~~~~~~v~~~~~~~~ 76 (260)
T 1nff_A 5 LTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELA--------DAARYVHLDVTQPAQWKAAVDTAV 76 (260)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTG--------GGEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhh--------cCceEEEecCCCHHHHHHHHHHHH
Confidence 457899999999999999999999999999999997543332222221 3478899999999999988874
Q ss_pred ---CCCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHH----HHcCCCEEEEeccccccCCCCCCCccCCC
Q 019795 80 ---QKFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAM----AKYNCKKLVFSSSATIYGQPEKIPCVEDF 148 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~ 148 (335)
.++|+|||+||.... ..+.++++..+++|+.++.++++++ ++.+.++||++||...+.
T Consensus 77 ~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~----------- 145 (260)
T 1nff_A 77 TAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLA----------- 145 (260)
T ss_dssp HHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS-----------
T ss_pred HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEeehhhcC-----------
Confidence 379999999997432 1234567789999999998777764 445667999999987653
Q ss_pred CCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 149 PYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 149 ~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
+..+...|+.+|...+.+++.++.+. .++++.++||+.++++
T Consensus 146 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~ 189 (260)
T 1nff_A 146 GTVACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTP 189 (260)
T ss_dssp CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSG
T ss_pred CCCCchhHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCCCC
Confidence 22344689999999999999888763 2899999999999887
|
| >1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=2.6e-23 Score=180.85 Aligned_cols=175 Identities=14% Similarity=0.053 Sum_probs=138.1
Q ss_pred CCCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCC-chhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc
Q 019795 1 MASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNS-VPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS 79 (335)
Q Consensus 1 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~ 79 (335)
|+++|++|||||+|+||+++++.|+++|++|++++|+... .....+.+....+ .++.++.+|++|++++.++++.
T Consensus 1 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~----~~~~~~~~D~~~~~~v~~~~~~ 76 (260)
T 1x1t_A 1 MLKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHG----VKVLYDGADLSKGEAVRGLVDN 76 (260)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHT----SCEEEECCCTTSHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccC----CcEEEEECCCCCHHHHHHHHHH
Confidence 7889999999999999999999999999999999987544 3333333322111 4678899999999999888874
Q ss_pred -----CCCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHHH----HcCCCEEEEeccccccCCCCCCCccC
Q 019795 80 -----QKFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAMA----KYNCKKLVFSSSATIYGQPEKIPCVE 146 (335)
Q Consensus 80 -----~~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~v~~Ss~~vyg~~~~~~~~e 146 (335)
.++|++||+||.... ..+.++++..+++|+.++.++++++. +.+.++||++||...+.
T Consensus 77 ~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--------- 147 (260)
T 1x1t_A 77 AVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLV--------- 147 (260)
T ss_dssp HHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS---------
T ss_pred HHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECcHHhCc---------
Confidence 379999999997432 22455677899999999999999864 34567999999987652
Q ss_pred CCCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 147 DFPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 147 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
+..+...|+.||...+.+++.++.++ .++++.+++|+.+.++
T Consensus 148 --~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~ 191 (260)
T 1x1t_A 148 --ASANKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTP 191 (260)
T ss_dssp --CCTTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC-
T ss_pred --CCCCCchHHHHHHHHHHHHHHHHHHhccCCEEEEEEeecCccCc
Confidence 22345689999999999999888763 2799999999999886
|
| >4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A | Back alignment and structure |
|---|
Probab=99.91 E-value=1.4e-23 Score=181.95 Aligned_cols=169 Identities=17% Similarity=0.141 Sum_probs=136.6
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc---
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS--- 79 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~--- 79 (335)
++|++|||||+|+||++++++|+++|++|++++|+........+.+ +.++.++.+|++|+++++++++.
T Consensus 7 ~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~--------~~~~~~~~~Dv~~~~~v~~~~~~~~~ 78 (255)
T 4eso_A 7 QGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEF--------GPRVHALRSDIADLNEIAVLGAAAGQ 78 (255)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH--------GGGEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh--------CCcceEEEccCCCHHHHHHHHHHHHH
Confidence 4589999999999999999999999999999999754433333222 15788999999999999887764
Q ss_pred --CCCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHHHHc--CCCEEEEeccccccCCCCCCCccCCCCCC
Q 019795 80 --QKFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAMAKY--NCKKLVFSSSATIYGQPEKIPCVEDFPYG 151 (335)
Q Consensus 80 --~~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~ 151 (335)
.++|++||+||.... ..+.++++..+++|+.++.++++++... ..++||++||...+. +..
T Consensus 79 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~ 147 (255)
T 4eso_A 79 TLGAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSSVADEG-----------GHP 147 (255)
T ss_dssp HHSSEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCGGGSS-----------BCT
T ss_pred HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECChhhcC-----------CCC
Confidence 379999999997532 2245677789999999999999998764 225899999977652 233
Q ss_pred CCChhHHhHHHHHHHHHHHHhhCC--CCeEEEEecccccCC
Q 019795 152 AMNPYGRTKQWCEEIAFDVQKADP--EWRIILLRYFNPVGA 190 (335)
Q Consensus 152 ~~~~Y~~sK~~~E~~~~~~~~~~~--~~~~~~lR~~~v~G~ 190 (335)
+...|+.||...+.+++.++.++. ++++.+++|+.|..+
T Consensus 148 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~ 188 (255)
T 4eso_A 148 GMSVYSASKAALVSFASVLAAELLPRGIRVNSVSPGFIDTP 188 (255)
T ss_dssp TBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEEECSBCCS
T ss_pred CchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEecCcccCc
Confidence 456899999999999999888752 799999999999876
|
| >3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} | Back alignment and structure |
|---|
Probab=99.91 E-value=1.2e-23 Score=183.09 Aligned_cols=170 Identities=16% Similarity=0.175 Sum_probs=130.4
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
+++|++|||||+|+||++++++|+++|++|++++|+........+.+ ...+.++.+|++|.++++++++.
T Consensus 7 l~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~--------~~~~~~~~~D~~~~~~~~~~~~~~~ 78 (261)
T 3n74_A 7 LEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEI--------GDAALAVAADISKEADVDAAVEAAL 78 (261)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH--------CTTEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh--------CCceEEEEecCCCHHHHHHHHHHHH
Confidence 45789999999999999999999999999999999755443333322 25788999999999999888875
Q ss_pred ---CCCCEEEEcccccch-----hhhhcChHHHHHHhHHHHHHHHHHHHHc----C----CCEEEEeccccccCCCCCCC
Q 019795 80 ---QKFEAVIHFGALKAV-----AESVQHPFRYFDNNLIGTINLYQAMAKY----N----CKKLVFSSSATIYGQPEKIP 143 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~~-----~~~~~~~~~~~~~nv~~~~~l~~~~~~~----~----~~~~v~~Ss~~vyg~~~~~~ 143 (335)
.++|++||+||.... ..+.++++..+++|+.++.++++++... + ..+||++||...+.
T Consensus 79 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~~~~------ 152 (261)
T 3n74_A 79 SKFGKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAGR------ 152 (261)
T ss_dssp HHHSCCCEEEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTTTS------
T ss_pred HhcCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchhhcC------
Confidence 379999999997431 1244567789999999999999986432 1 34799999977552
Q ss_pred ccCCCCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 144 CVEDFPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 144 ~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
+......|+.+|.+.+.+++.++.++ .++++.+++|+.+..+
T Consensus 153 -----~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~ 196 (261)
T 3n74_A 153 -----PRPNLAWYNATKGWVVSVTKALAIELAPAKIRVVALNPVAGETP 196 (261)
T ss_dssp -----CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-----
T ss_pred -----CCCCccHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCh
Confidence 33345679999999999999888773 2799999999998776
|
| >1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G | Back alignment and structure |
|---|
Probab=99.91 E-value=2.2e-23 Score=179.46 Aligned_cols=171 Identities=15% Similarity=0.114 Sum_probs=133.2
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhCCCeEEEE-ecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc---
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQGGFKVVLI-DNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS--- 79 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~--- 79 (335)
+|+||||||+|+||++++++|+++|++|+++ +|+........+.+... +.++.++.+|++|++++.++++.
T Consensus 1 ~k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~ 75 (244)
T 1edo_A 1 SPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAY-----GGQAITFGGDVSKEADVEAMMKTAID 75 (244)
T ss_dssp CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHH-----TCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc-----CCcEEEEeCCCCCHHHHHHHHHHHHH
Confidence 5799999999999999999999999999985 67544333333333221 14688899999999999988874
Q ss_pred --CCCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHHHH----cCCCEEEEeccccccCCCCCCCccCCCC
Q 019795 80 --QKFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAMAK----YNCKKLVFSSSATIYGQPEKIPCVEDFP 149 (335)
Q Consensus 80 --~~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~v~~Ss~~vyg~~~~~~~~e~~~ 149 (335)
.++|+|||+||.... ..+.++++..+++|+.++.++++++.+ .+.++||++||...+. +
T Consensus 76 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~-----------~ 144 (244)
T 1edo_A 76 AWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLI-----------G 144 (244)
T ss_dssp HSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHH-----------C
T ss_pred HcCCCCEEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCEEEEECChhhcC-----------C
Confidence 379999999997432 223456678999999999999998765 3567999999976541 2
Q ss_pred CCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 150 YGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 150 ~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
..+...|+.+|...+.+++.++.+. .++++.++||+.++++
T Consensus 145 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~ 187 (244)
T 1edo_A 145 NIGQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASD 187 (244)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSH
T ss_pred CCCCccchhhHHHHHHHHHHHHHHhhhcCCEEEEEeeCccccc
Confidence 2345689999999999998887662 3899999999999876
|
| >4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=99.91 E-value=1.5e-23 Score=182.95 Aligned_cols=174 Identities=16% Similarity=0.080 Sum_probs=139.2
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
+++|+||||||+|+||+++++.|+++|++|++++|+........+.+.+..+ .++.++.+|++|+++++++++.
T Consensus 18 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~----~~~~~~~~Dv~~~~~v~~~~~~~~ 93 (266)
T 4egf_A 18 LDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFG----TDVHTVAIDLAEPDAPAELARRAA 93 (266)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHC----CCEEEEECCTTSTTHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcC----CcEEEEEecCCCHHHHHHHHHHHH
Confidence 4568999999999999999999999999999999976655555555443222 5789999999999998888774
Q ss_pred ---CCCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHHHH----cC-CCEEEEeccccccCCCCCCCccCC
Q 019795 80 ---QKFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAMAK----YN-CKKLVFSSSATIYGQPEKIPCVED 147 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~-~~~~v~~Ss~~vyg~~~~~~~~e~ 147 (335)
.++|++||+||.... ..+.++++..+++|+.++.++++++.. .+ ..+||++||...+.
T Consensus 94 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~---------- 163 (266)
T 4egf_A 94 EAFGGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAALA---------- 163 (266)
T ss_dssp HHHTSCSEEEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTS----------
T ss_pred HHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchhhcc----------
Confidence 389999999997532 234556778999999999999998654 23 35899999987652
Q ss_pred CCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 148 FPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 148 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
+..+...|+.+|...+.+++.++.++ .++++.+++|+.|..+
T Consensus 164 -~~~~~~~Y~asK~a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~ 207 (266)
T 4egf_A 164 -PLPDHYAYCTSKAGLVMATKVLARELGPHGIRANSVCPTVVLTE 207 (266)
T ss_dssp -CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBCSH
T ss_pred -CCCCChHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCc
Confidence 33445689999999999999888773 2799999999998775
|
| >4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.91 E-value=1.2e-23 Score=184.09 Aligned_cols=175 Identities=17% Similarity=0.177 Sum_probs=132.7
Q ss_pred CCCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEE-ecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc
Q 019795 1 MASEKNILVTGGAGFIGTHCALQLLQGGFKVVLI-DNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS 79 (335)
Q Consensus 1 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~ 79 (335)
|.++|+||||||+|+||++++++|+++|++|+++ .|+........+.+... ..++.++.+|++|+++++++++.
T Consensus 23 m~~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~Dl~~~~~v~~~~~~ 97 (272)
T 4e3z_A 23 MSDTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITES-----GGEAVAIPGDVGNAADIAAMFSA 97 (272)
T ss_dssp -CCSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT-----TCEEEEEECCTTCHHHHHHHHHH
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhc-----CCcEEEEEcCCCCHHHHHHHHHH
Confidence 5667899999999999999999999999999887 44433333333333321 25789999999999999988875
Q ss_pred -----CCCCEEEEcccccch-----hhhhcChHHHHHHhHHHHHHHHHHHHHc-------CCCEEEEeccccccCCCCCC
Q 019795 80 -----QKFEAVIHFGALKAV-----AESVQHPFRYFDNNLIGTINLYQAMAKY-------NCKKLVFSSSATIYGQPEKI 142 (335)
Q Consensus 80 -----~~~d~vi~~a~~~~~-----~~~~~~~~~~~~~nv~~~~~l~~~~~~~-------~~~~~v~~Ss~~vyg~~~~~ 142 (335)
.++|+|||+||.... ..+.++++..+++|+.++.++++++... +.++||++||...+..
T Consensus 98 ~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~---- 173 (272)
T 4e3z_A 98 VDRQFGRLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILG---- 173 (272)
T ss_dssp HHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCTHHHHC----
T ss_pred HHHhCCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcchHhccC----
Confidence 379999999997432 1245667789999999999999987543 2458999999766421
Q ss_pred CccCCCCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 143 PCVEDFPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 143 ~~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
.......|+.||...+.+++.++.++ .++++.+++|+.|.++
T Consensus 174 ------~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~ 217 (272)
T 4e3z_A 174 ------SATQYVDYAASKAAIDTFTIGLAREVAAEGIRVNAVRPGIIETD 217 (272)
T ss_dssp ------CTTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC--
T ss_pred ------CCCCcchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCCcCC
Confidence 11234569999999999999887764 2799999999999886
|
| >4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=3.5e-23 Score=180.81 Aligned_cols=173 Identities=17% Similarity=0.106 Sum_probs=135.6
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCC-chhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc-
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNS-VPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~- 79 (335)
+++|+||||||+|+||+++++.|+++|++|++++|+... .....+.+... ...+.++.+|++|+++++++++.
T Consensus 26 l~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~D~~d~~~v~~~~~~~ 100 (269)
T 4dmm_A 26 LTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAA-----GGEAFAVKADVSQESEVEALFAAV 100 (269)
T ss_dssp TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT-----TCCEEEEECCTTSHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhc-----CCcEEEEECCCCCHHHHHHHHHHH
Confidence 356899999999999999999999999999999884332 22223333221 25788999999999999988875
Q ss_pred ----CCCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHHH----HcCCCEEEEeccccccCCCCCCCccCC
Q 019795 80 ----QKFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAMA----KYNCKKLVFSSSATIYGQPEKIPCVED 147 (335)
Q Consensus 80 ----~~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~v~~Ss~~vyg~~~~~~~~e~ 147 (335)
.++|++||+||.... ..+.++++..+++|+.++.++++++. +.+.++||++||...+.
T Consensus 101 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~---------- 170 (269)
T 4dmm_A 101 IERWGRLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQRSGRIINIASVVGEM---------- 170 (269)
T ss_dssp HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCHHHHH----------
T ss_pred HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcC----------
Confidence 389999999997532 23456777899999999999999864 34557999999976542
Q ss_pred CCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 148 FPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 148 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
+..+...|+.||...+.+++.++.++ .++++.+++|+.|..+
T Consensus 171 -~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~ 214 (269)
T 4dmm_A 171 -GNPGQANYSAAKAGVIGLTKTVAKELASRGITVNAVAPGFIATD 214 (269)
T ss_dssp -CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBTTS
T ss_pred -CCCCchhHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEECCCcCc
Confidence 23345689999999999999888763 2799999999999876
|
| >3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=99.91 E-value=2.1e-23 Score=178.70 Aligned_cols=153 Identities=19% Similarity=0.201 Sum_probs=110.0
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCC-CeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcC
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGG-FKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQ 80 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~ 80 (335)
|+||+||||||||+||++++++|+++| ++|++++|++...... ...++.++.+|++|++++.++++
T Consensus 21 ~~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~-----------~~~~~~~~~~Dl~d~~~~~~~~~-- 87 (236)
T 3qvo_A 21 GHMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKP-----------YPTNSQIIMGDVLNHAALKQAMQ-- 87 (236)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSS-----------CCTTEEEEECCTTCHHHHHHHHT--
T ss_pred CcccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhccc-----------ccCCcEEEEecCCCHHHHHHHhc--
Confidence 357899999999999999999999999 8999999975443211 11578999999999999999998
Q ss_pred CCCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccCCCCCCC--ccCCCCCCCCChhHH
Q 019795 81 KFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQPEKIP--CVEDFPYGAMNPYGR 158 (335)
Q Consensus 81 ~~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~--~~e~~~~~~~~~Y~~ 158 (335)
++|+|||+|+.... ...+.+++++|++.++++||++||..+|+...... ..+..+..+...|
T Consensus 88 ~~D~vv~~a~~~~~--------------~~~~~~~~~~~~~~~~~~iV~iSS~~~~~~~~~~~~~~~~~~~~~~~~~~-- 151 (236)
T 3qvo_A 88 GQDIVYANLTGEDL--------------DIQANSVIAAMKACDVKRLIFVLSLGIYDEVPGKFVEWNNAVIGEPLKPF-- 151 (236)
T ss_dssp TCSEEEEECCSTTH--------------HHHHHHHHHHHHHTTCCEEEEECCCCC----------------CGGGHHH--
T ss_pred CCCEEEEcCCCCch--------------hHHHHHHHHHHHHcCCCEEEEEecceecCCCCcccccchhhcccchHHHH--
Confidence 88999999986321 12466899999999999999999999997653322 2222222223334
Q ss_pred hHHHHHHHHHHHHhhCCCCeEEEEecccccCC
Q 019795 159 TKQWCEEIAFDVQKADPEWRIILLRYFNPVGA 190 (335)
Q Consensus 159 sK~~~E~~~~~~~~~~~~~~~~~lR~~~v~G~ 190 (335)
..+|+.++ .. +++++++||+.++++
T Consensus 152 --~~~~~~l~----~~-gi~~~~vrPg~i~~~ 176 (236)
T 3qvo_A 152 --RRAADAIE----AS-GLEYTILRPAWLTDE 176 (236)
T ss_dssp --HHHHHHHH----TS-CSEEEEEEECEEECC
T ss_pred --HHHHHHHH----HC-CCCEEEEeCCcccCC
Confidence 44455543 33 999999999999986
|
| >3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} | Back alignment and structure |
|---|
Probab=99.91 E-value=1e-22 Score=178.84 Aligned_cols=174 Identities=17% Similarity=0.101 Sum_probs=134.9
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
+++|+||||||+|+||+++++.|+++|++|++++|+........+.+... ..++.++.+|++|.+++.++++.
T Consensus 32 l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~Dl~~~~~~~~~~~~~~ 106 (279)
T 3ctm_A 32 LKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTY-----GVHSKAYKCNISDPKSVEETISQQE 106 (279)
T ss_dssp CTTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHH-----CSCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-----CCcceEEEeecCCHHHHHHHHHHHH
Confidence 46789999999999999999999999999999999876654444333221 15688999999999999988874
Q ss_pred ---CCCCEEEEcccccch------hhhhcChHHHHHHhHHHHH----HHHHHHHHcCCCEEEEeccccccCCCCCCCccC
Q 019795 80 ---QKFEAVIHFGALKAV------AESVQHPFRYFDNNLIGTI----NLYQAMAKYNCKKLVFSSSATIYGQPEKIPCVE 146 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~~------~~~~~~~~~~~~~nv~~~~----~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~e 146 (335)
..+|+|||+||.... ..+.++++..+++|+.++. .+++.+++.+.++||++||...+..
T Consensus 107 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~-------- 178 (279)
T 3ctm_A 107 KDFGTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNGKGSLIITSSISGKIV-------- 178 (279)
T ss_dssp HHHSCCSEEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCCTTSCC--------
T ss_pred HHhCCCCEEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEECchHhccC--------
Confidence 369999999997533 2344566789999999965 5555566667789999999775421
Q ss_pred CCCCCCCChhHHhHHHHHHHHHHHHhhCC--CCeEEEEecccccCC
Q 019795 147 DFPYGAMNPYGRTKQWCEEIAFDVQKADP--EWRIILLRYFNPVGA 190 (335)
Q Consensus 147 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~--~~~~~~lR~~~v~G~ 190 (335)
.+..+...|+.+|...|.+++.++.++. + ++.+++|+.+.++
T Consensus 179 -~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~-~v~~v~Pg~v~t~ 222 (279)
T 3ctm_A 179 -NIPQLQAPYNTAKAACTHLAKSLAIEWAPFA-RVNTISPGYIDTD 222 (279)
T ss_dssp ----CCHHHHHHHHHHHHHHHHHHHHHTTTTC-EEEEEEECSBSST
T ss_pred -CCCCCcccHHHHHHHHHHHHHHHHHHhcccC-CEEEEeccCCccc
Confidence 0134456799999999999999888752 5 8999999998776
|
| >1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.91 E-value=2.3e-23 Score=178.99 Aligned_cols=160 Identities=21% Similarity=0.246 Sum_probs=129.3
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc---
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS--- 79 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~--- 79 (335)
++|+||||||+|+||++++++|+++|++|++++|+.. . ..+.++.+|++|++++.++++.
T Consensus 1 ~~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~-~----------------~~~~~~~~D~~~~~~~~~~~~~~~~ 63 (242)
T 1uay_A 1 MERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE-G----------------EDLIYVEGDVTREEDVRRAVARAQE 63 (242)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC-S----------------SSSEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc-c----------------cceEEEeCCCCCHHHHHHHHHHHHh
Confidence 4689999999999999999999999999999998754 1 3457899999999999988874
Q ss_pred -CCCCEEEEcccccchhh----h----hcChHHHHHHhHHHHHHHHHHHHHc----C------CCEEEEeccccccCCCC
Q 019795 80 -QKFEAVIHFGALKAVAE----S----VQHPFRYFDNNLIGTINLYQAMAKY----N------CKKLVFSSSATIYGQPE 140 (335)
Q Consensus 80 -~~~d~vi~~a~~~~~~~----~----~~~~~~~~~~nv~~~~~l~~~~~~~----~------~~~~v~~Ss~~vyg~~~ 140 (335)
.++|+|||+|+...... . .++++..+++|+.++.++++++... + .++||++||...+..
T Consensus 64 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~-- 141 (242)
T 1uay_A 64 EAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEG-- 141 (242)
T ss_dssp HSCEEEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHC--
T ss_pred hCCceEEEEcccccCcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccC--
Confidence 27899999999743211 1 1256789999999999999998653 1 128999999887642
Q ss_pred CCCccCCCCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 141 KIPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 141 ~~~~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
..+...|+.+|...+.+++.++.+. .+++++++||+.++++
T Consensus 142 ---------~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~ 184 (242)
T 1uay_A 142 ---------QIGQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTP 184 (242)
T ss_dssp ---------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSH
T ss_pred ---------CCCCchhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccCcch
Confidence 2345689999999999998877653 2799999999999887
|
| >4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.91 E-value=3.8e-23 Score=181.66 Aligned_cols=172 Identities=15% Similarity=0.136 Sum_probs=128.8
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCC-CchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHN-SVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
++|++|||||+|+||+++++.|+++|++|++++|+.. ......+.+... ..++.++.+|++|++++.++++.
T Consensus 28 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~Dv~d~~~v~~~~~~~~ 102 (280)
T 4da9_A 28 ARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGL-----GARVIFLRADLADLSSHQATVDAVV 102 (280)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHT-----TCCEEEEECCTTSGGGHHHHHHHHH
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhc-----CCcEEEEEecCCCHHHHHHHHHHHH
Confidence 3588999999999999999999999999999986433 223333333321 25789999999999998888875
Q ss_pred ---CCCCEEEEcccccc------hhhhhcChHHHHHHhHHHHHHHHHHHHHc----C---CCEEEEeccccccCCCCCCC
Q 019795 80 ---QKFEAVIHFGALKA------VAESVQHPFRYFDNNLIGTINLYQAMAKY----N---CKKLVFSSSATIYGQPEKIP 143 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~------~~~~~~~~~~~~~~nv~~~~~l~~~~~~~----~---~~~~v~~Ss~~vyg~~~~~~ 143 (335)
.++|++||+||... ...+.++++.++++|+.++.++++++... + ..+||++||...+.
T Consensus 103 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~~~~------ 176 (280)
T 4da9_A 103 AEFGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAVM------ 176 (280)
T ss_dssp HHHSCCCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC----------
T ss_pred HHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchhhcc------
Confidence 38999999999731 12245677789999999999999986542 2 45899999976542
Q ss_pred ccCCCCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 144 CVEDFPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 144 ~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
+..+...|+.||...+.+++.++.+. .++++.+++|+.|..+
T Consensus 177 -----~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~ 220 (280)
T 4da9_A 177 -----TSPERLDYCMSKAGLAAFSQGLALRLAETGIAVFEVRPGIIRSD 220 (280)
T ss_dssp --------CCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC-
T ss_pred -----CCCCccHHHHHHHHHHHHHHHHHHHHHHhCcEEEEEeecCCcCC
Confidence 23344679999999999999988773 2799999999998776
|
| >1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=7.4e-23 Score=178.45 Aligned_cols=172 Identities=16% Similarity=0.039 Sum_probs=136.0
Q ss_pred CCCeEEEEcCC--ChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc-
Q 019795 3 SEKNILVTGGA--GFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS- 79 (335)
Q Consensus 3 ~~~~vlItGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~- 79 (335)
++|+||||||+ |+||+++++.|+++|++|++++|+. ...+..+.+.+.. ....++.+|++|++++.++++.
T Consensus 8 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~~l~~~~-----~~~~~~~~D~~~~~~v~~~~~~~ 81 (265)
T 1qsg_A 8 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND-KLKGRVEEFAAQL-----GSDIVLQCDVAEDASIDTMFAEL 81 (265)
T ss_dssp TTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESST-TTHHHHHHHHHHT-----TCCCEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcH-HHHHHHHHHHHhc-----CCcEEEEccCCCHHHHHHHHHHH
Confidence 45899999999 9999999999999999999999976 4434444443321 2347899999999999888774
Q ss_pred ----CCCCEEEEcccccch--------h-hhhcChHHHHHHhHHHHHHHHHHHHHcC--CCEEEEeccccccCCCCCCCc
Q 019795 80 ----QKFEAVIHFGALKAV--------A-ESVQHPFRYFDNNLIGTINLYQAMAKYN--CKKLVFSSSATIYGQPEKIPC 144 (335)
Q Consensus 80 ----~~~d~vi~~a~~~~~--------~-~~~~~~~~~~~~nv~~~~~l~~~~~~~~--~~~~v~~Ss~~vyg~~~~~~~ 144 (335)
.++|+|||+||.... . .+.++++..+++|+.++.++++++...- .++||++||...+.
T Consensus 82 ~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~------- 154 (265)
T 1qsg_A 82 GKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAER------- 154 (265)
T ss_dssp HTTCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTS-------
T ss_pred HHHcCCCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEcchhhcc-------
Confidence 278999999997532 1 3445677899999999999999987651 25899999976652
Q ss_pred cCCCCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCCC
Q 019795 145 VEDFPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGAH 191 (335)
Q Consensus 145 ~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~~ 191 (335)
+..+...|+.||...+.+++.++.++ .++++.+++|+.|+++.
T Consensus 155 ----~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~ 199 (265)
T 1qsg_A 155 ----AIPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLA 199 (265)
T ss_dssp ----BCTTTTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTT
T ss_pred ----CCCCchHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCccch
Confidence 22345689999999999999888763 27999999999998873
|
| >3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} | Back alignment and structure |
|---|
Probab=99.91 E-value=1.3e-23 Score=183.63 Aligned_cols=174 Identities=13% Similarity=0.083 Sum_probs=133.9
Q ss_pred CCCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCc-hhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc
Q 019795 1 MASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSV-PEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS 79 (335)
Q Consensus 1 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~ 79 (335)
|+++|++|||||+|+||++++++|+++|++|++++++.... ......+.. ...++.++.+|++|.++++++++.
T Consensus 22 ~~~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~Dl~~~~~v~~~~~~ 96 (269)
T 3gk3_A 22 MQAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERD-----AGRDFKAYAVDVADFESCERCAEK 96 (269)
T ss_dssp --CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHT-----TTCCCEEEECCTTCHHHHHHHHHH
T ss_pred hhcCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHh-----cCCceEEEEecCCCHHHHHHHHHH
Confidence 67789999999999999999999999999999998543322 111122211 125789999999999999888875
Q ss_pred -----CCCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHHHH----cCCCEEEEeccccccCCCCCCCccC
Q 019795 80 -----QKFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAMAK----YNCKKLVFSSSATIYGQPEKIPCVE 146 (335)
Q Consensus 80 -----~~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~v~~Ss~~vyg~~~~~~~~e 146 (335)
.++|+|||+||.... ..+.++++..+++|+.++.++++++.. .+.++||++||...+.
T Consensus 97 ~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~--------- 167 (269)
T 3gk3_A 97 VLADFGKVDVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERRFGRIVNIGSVNGSR--------- 167 (269)
T ss_dssp HHHHHSCCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHH---------
T ss_pred HHHHcCCCCEEEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEeCChhhcc---------
Confidence 379999999997532 224556778999999999999998643 4557999999976542
Q ss_pred CCCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 147 DFPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 147 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
+..+...|+.||...+.+++.++.++ .++++.+++|+.|..+
T Consensus 168 --~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~ 211 (269)
T 3gk3_A 168 --GAFGQANYASAKAGIHGFTKTLALETAKRGITVNTVSPGYLATA 211 (269)
T ss_dssp --CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCT
T ss_pred --CCCCcchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCcccch
Confidence 23345689999999999999887763 2789999999998776
|
| >3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=99.91 E-value=5e-23 Score=178.88 Aligned_cols=168 Identities=17% Similarity=0.190 Sum_probs=133.2
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
+++|+||||||+|+||+++++.|+++|++|++++|+..... +.+.+ .++.++.+|++|++++.++++.
T Consensus 25 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~---~~~~~-------~~~~~~~~Dv~~~~~v~~~~~~~~ 94 (260)
T 3gem_A 25 LSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASV---TELRQ-------AGAVALYGDFSCETGIMAFIDLLK 94 (260)
T ss_dssp --CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHH---HHHHH-------HTCEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHH---HHHHh-------cCCeEEECCCCCHHHHHHHHHHHH
Confidence 35689999999999999999999999999999999765432 22222 2478899999999999988875
Q ss_pred ---CCCCEEEEcccccch---hhhhcChHHHHHHhHHHHHHHHHHHHH----cCCCEEEEeccccccCCCCCCCccCCCC
Q 019795 80 ---QKFEAVIHFGALKAV---AESVQHPFRYFDNNLIGTINLYQAMAK----YNCKKLVFSSSATIYGQPEKIPCVEDFP 149 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~~---~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~v~~Ss~~vyg~~~~~~~~e~~~ 149 (335)
.++|++||+||.... ..+.++++..+++|+.++.++++++.. .+.++||++||...+. +
T Consensus 95 ~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~-----------~ 163 (260)
T 3gem_A 95 TQTSSLRAVVHNASEWLAETPGEEADNFTRMFSVHMLAPYLINLHCEPLLTASEVADIVHISDDVTRK-----------G 163 (260)
T ss_dssp HHCSCCSEEEECCCCCCCCCTTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGT-----------C
T ss_pred HhcCCCCEEEECCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcC-----------C
Confidence 379999999997432 223456678999999999999998754 3457999999977652 3
Q ss_pred CCCCChhHHhHHHHHHHHHHHHhhC-CCCeEEEEecccccCC
Q 019795 150 YGAMNPYGRTKQWCEEIAFDVQKAD-PEWRIILLRYFNPVGA 190 (335)
Q Consensus 150 ~~~~~~Y~~sK~~~E~~~~~~~~~~-~~~~~~~lR~~~v~G~ 190 (335)
..+...|+.||...+.+++.++.++ +++++.+++|+.+..+
T Consensus 164 ~~~~~~Y~asKaa~~~l~~~la~e~~~~Irvn~v~PG~v~t~ 205 (260)
T 3gem_A 164 SSKHIAYCATKAGLESLTLSFAARFAPLVKVNGIAPALLMFQ 205 (260)
T ss_dssp CSSCHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECTTCC-
T ss_pred CCCcHhHHHHHHHHHHHHHHHHHHHCCCCEEEEEeecccccC
Confidence 3445689999999999999988875 3699999999998765
|
| >2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.91 E-value=3e-23 Score=178.96 Aligned_cols=174 Identities=17% Similarity=0.115 Sum_probs=135.2
Q ss_pred CCCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEec-CCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc
Q 019795 1 MASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDN-LHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS 79 (335)
Q Consensus 1 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~ 79 (335)
|+++|++|||||+|+||++++++|+++|++|++++| +........+.+... ..++.++.+|++|+++++++++.
T Consensus 1 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~ 75 (246)
T 2uvd_A 1 MLKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKL-----GSDAIAVRADVANAEDVTNMVKQ 75 (246)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT-----TCCEEEEECCTTCHHHHHHHHHH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc-----CCcEEEEEcCCCCHHHHHHHHHH
Confidence 678999999999999999999999999999999998 433333333333221 14688899999999999988874
Q ss_pred -----CCCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHHH----HcCCCEEEEeccccccCCCCCCCccC
Q 019795 80 -----QKFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAMA----KYNCKKLVFSSSATIYGQPEKIPCVE 146 (335)
Q Consensus 80 -----~~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~v~~Ss~~vyg~~~~~~~~e 146 (335)
.++|++||+||.... ..+.++++..+++|+.++.++++++. +.+.++||++||...+.
T Consensus 76 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--------- 146 (246)
T 2uvd_A 76 TVDVFGQVDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQRHGRIVNIASVVGVT--------- 146 (246)
T ss_dssp HHHHHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHH---------
T ss_pred HHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCHHhcC---------
Confidence 379999999997432 22445677899999999888887754 44667999999976542
Q ss_pred CCCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 147 DFPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 147 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
+..+...|+.+|...+.+.+.++.+. .++++.+++|+.+..+
T Consensus 147 --~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~ 190 (246)
T 2uvd_A 147 --GNPGQANYVAAKAGVIGLTKTSAKELASRNITVNAIAPGFIATD 190 (246)
T ss_dssp --CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGG
T ss_pred --CCCCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeccccCc
Confidence 12234679999999999988877653 2799999999999776
|
| >2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.91 E-value=4.1e-23 Score=181.96 Aligned_cols=173 Identities=15% Similarity=0.118 Sum_probs=134.6
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
+++|+||||||+|+||+++++.|+++|++|++++|+........+.+... ..++.++.+|++|.++++++++.
T Consensus 42 l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~-----~~~~~~~~~Dl~d~~~v~~~~~~~~ 116 (285)
T 2c07_A 42 GENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSF-----GYESSGYAGDVSKKEEISEVINKIL 116 (285)
T ss_dssp CSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTT-----TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhc-----CCceeEEECCCCCHHHHHHHHHHHH
Confidence 45689999999999999999999999999999888654443333333221 25688999999999999988864
Q ss_pred ---CCCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHHH----HcCCCEEEEeccccccCCCCCCCccCCC
Q 019795 80 ---QKFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAMA----KYNCKKLVFSSSATIYGQPEKIPCVEDF 148 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~v~~Ss~~vyg~~~~~~~~e~~ 148 (335)
.++|+|||+||.... ..+.++++..+++|+.++.++++++. +.+.++||++||...+.
T Consensus 117 ~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~----------- 185 (285)
T 2c07_A 117 TEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLT----------- 185 (285)
T ss_dssp HHCSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHH-----------
T ss_pred HhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhcc-----------
Confidence 379999999997532 22445677899999999988888865 34567999999976542
Q ss_pred CCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 149 PYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 149 ~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
+..+...|+.+|...+.+++.++.+. .++++.++||+.+.++
T Consensus 186 ~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~ 229 (285)
T 2c07_A 186 GNVGQANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSD 229 (285)
T ss_dssp CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-
T ss_pred CCCCCchHHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcEecC
Confidence 22345689999999999998887663 2799999999999876
|
| >2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} | Back alignment and structure |
|---|
Probab=99.91 E-value=1.2e-23 Score=181.09 Aligned_cols=171 Identities=13% Similarity=0.068 Sum_probs=130.2
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhCCCeEEEE-ecCCCCchhhHHhhhhhcCCccccceeE-EEccCCCHHHHHHHHhc--
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQGGFKVVLI-DNLHNSVPEAVDRVKDLAGPELAKKLEF-HVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~Dl~d~~~~~~~~~~-- 79 (335)
||+|+||||+|+||++++++|+++|++|+++ +|+........+.+... ..++.. +.+|++|.++++++++.
T Consensus 1 ~k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~~~~ 75 (245)
T 2ph3_A 1 MRKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRR-----GSPLVAVLGANLLEAEAATALVHQAA 75 (245)
T ss_dssp CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHT-----TCSCEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc-----CCceEEEEeccCCCHHHHHHHHHHHH
Confidence 5799999999999999999999999999998 77644333333333221 135566 89999999998888763
Q ss_pred ---CCCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHH----HHcCCCEEEEeccccccCCCCCCCccCCC
Q 019795 80 ---QKFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAM----AKYNCKKLVFSSSATIYGQPEKIPCVEDF 148 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~ 148 (335)
.++|+|||+||.... ..+.++++..+++|+.++.++++++ ++.+.++||++||...+.
T Consensus 76 ~~~~~~d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~----------- 144 (245)
T 2ph3_A 76 EVLGGLDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKARFGRIVNITSVVGIL----------- 144 (245)
T ss_dssp HHHTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHH-----------
T ss_pred HhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCEEEEEeChhhcc-----------
Confidence 379999999997432 2244567789999999977776654 445678999999975432
Q ss_pred CCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 149 PYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 149 ~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
+..+...|+.+|...+.+++.++.+. .+++++++||+.++++
T Consensus 145 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~ 188 (245)
T 2ph3_A 145 GNPGQANYVASKAGLIGFTRAVAKEYAQRGITVNAVAPGFIETE 188 (245)
T ss_dssp CCSSBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCH
T ss_pred CCCCCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEEEeecCc
Confidence 12234689999999999998887663 2799999999999886
|
| >3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} | Back alignment and structure |
|---|
Probab=99.90 E-value=1.3e-22 Score=177.78 Aligned_cols=175 Identities=15% Similarity=0.113 Sum_probs=139.5
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
+++|++|||||+|+||+++++.|+++|++|++++|+........+.+... ..++.++.+|++|++++++++++
T Consensus 30 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~Dl~d~~~v~~~~~~~~ 104 (276)
T 3r1i_A 30 LSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGV-----GGKALPIRCDVTQPDQVRGMLDQMT 104 (276)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHT-----TCCCEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-----CCeEEEEEcCCCCHHHHHHHHHHHH
Confidence 45789999999999999999999999999999999876666555555432 15788999999999999988875
Q ss_pred ---CCCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHHHH----cC-CCEEEEeccccccCCCCCCCccCC
Q 019795 80 ---QKFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAMAK----YN-CKKLVFSSSATIYGQPEKIPCVED 147 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~-~~~~v~~Ss~~vyg~~~~~~~~e~ 147 (335)
.++|++||+||.... ..+.++++..+++|+.++.++++++.. .+ ..++|++||...+...
T Consensus 105 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS~~~~~~~-------- 176 (276)
T 3r1i_A 105 GELGGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHIIN-------- 176 (276)
T ss_dssp HHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC--------
T ss_pred HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECchHhcccC--------
Confidence 389999999997532 224556778899999999999998654 23 2689999997654211
Q ss_pred CCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 148 FPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 148 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
...+...|+.||...+.+++.++.++ .++++.+++|+.|..+
T Consensus 177 -~~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~ 220 (276)
T 3r1i_A 177 -IPQQVSHYCTSKAAVVHLTKAMAVELAPHQIRVNSVSPGYIRTE 220 (276)
T ss_dssp -CSSCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCST
T ss_pred -CCCCcchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCC
Confidence 12345679999999999999988773 2799999999999776
|
| >3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.90 E-value=1.7e-23 Score=182.71 Aligned_cols=174 Identities=18% Similarity=0.213 Sum_probs=138.6
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcC-C
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQ-K 81 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~-~ 81 (335)
++|++|||||+|+||+++++.|+++|++|++++|+.....+..+.+..... ...+.++.+|+++++++++++++. +
T Consensus 9 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~g~ 85 (267)
T 3t4x_A 9 KGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYP---DAILQPVVADLGTEQGCQDVIEKYPK 85 (267)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCT---TCEEEEEECCTTSHHHHHHHHHHCCC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCC---CceEEEEecCCCCHHHHHHHHHhcCC
Confidence 458999999999999999999999999999999986655555555544321 146788999999999999988764 7
Q ss_pred CCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHHHH----cCCCEEEEeccccccCCCCCCCccCCCCCCCC
Q 019795 82 FEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAMAK----YNCKKLVFSSSATIYGQPEKIPCVEDFPYGAM 153 (335)
Q Consensus 82 ~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~ 153 (335)
+|++||+||.... ..+.++++..+++|+.++.++++++.. .+.++||++||...+. +..+.
T Consensus 86 id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~~~ 154 (267)
T 3t4x_A 86 VDILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERKEGRVIFIASEAAIM-----------PSQEM 154 (267)
T ss_dssp CSEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTEEEEEEECCGGGTS-----------CCTTC
T ss_pred CCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEEcchhhcc-----------CCCcc
Confidence 9999999997432 223456778899999999888887543 4557999999977652 33455
Q ss_pred ChhHHhHHHHHHHHHHHHhhCC--CCeEEEEecccccCC
Q 019795 154 NPYGRTKQWCEEIAFDVQKADP--EWRIILLRYFNPVGA 190 (335)
Q Consensus 154 ~~Y~~sK~~~E~~~~~~~~~~~--~~~~~~lR~~~v~G~ 190 (335)
..|+.||...+.+++.++.++. ++++.+++|+.+..+
T Consensus 155 ~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~ 193 (267)
T 3t4x_A 155 AHYSATKTMQLSLSRSLAELTTGTNVTVNTIMPGSTLTE 193 (267)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECCBCCH
T ss_pred hHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCeecCc
Confidence 7899999999999999988753 688999999988664
|
| >3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=99.90 E-value=2.1e-23 Score=184.53 Aligned_cols=173 Identities=16% Similarity=0.143 Sum_probs=136.0
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCC--chhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNS--VPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~ 79 (335)
+++|++|||||+|+||+++++.|+++|++|++++|+... .....+.+.+ . ..++.++.+|++|+++++++++.
T Consensus 47 l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~Dv~d~~~v~~~~~~ 121 (294)
T 3r3s_A 47 LKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEE-C----GRKAVLLPGDLSDESFARSLVHK 121 (294)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHH-T----TCCEEECCCCTTSHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHH-c----CCcEEEEEecCCCHHHHHHHHHH
Confidence 457899999999999999999999999999999885321 1111222221 1 25788999999999998888764
Q ss_pred -----CCCCEEEEcccccc-----hhhhhcChHHHHHHhHHHHHHHHHHHHHcCC--CEEEEeccccccCCCCCCCccCC
Q 019795 80 -----QKFEAVIHFGALKA-----VAESVQHPFRYFDNNLIGTINLYQAMAKYNC--KKLVFSSSATIYGQPEKIPCVED 147 (335)
Q Consensus 80 -----~~~d~vi~~a~~~~-----~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~--~~~v~~Ss~~vyg~~~~~~~~e~ 147 (335)
.++|++||+||... ...+.++++..+++|+.++.++++++...-. .+||++||...+.
T Consensus 122 ~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS~~~~~---------- 191 (294)
T 3r3s_A 122 AREALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSSIQAYQ---------- 191 (294)
T ss_dssp HHHHHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCGGGTS----------
T ss_pred HHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECChhhcc----------
Confidence 48999999999742 1224566788999999999999999877532 4999999988763
Q ss_pred CCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 148 FPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 148 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
+..+...|+.||...+.+++.++.++ .++++.+++|+.|+++
T Consensus 192 -~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~ 235 (294)
T 3r3s_A 192 -PSPHLLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTA 235 (294)
T ss_dssp -CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSH
T ss_pred -CCCCchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCccc
Confidence 33345679999999999999888764 2799999999999875
|
| >3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=99.90 E-value=2.6e-23 Score=181.66 Aligned_cols=163 Identities=16% Similarity=0.133 Sum_probs=133.1
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
+++|+||||||+|+||+++++.|+++|++|++++|+..... .....+.+|++|++++.++++.
T Consensus 12 ~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~---------------~~~~~~~~Dv~~~~~v~~~~~~~~ 76 (269)
T 3vtz_A 12 FTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDV---------------NVSDHFKIDVTNEEEVKEAVEKTT 76 (269)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--CT---------------TSSEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhcc---------------CceeEEEecCCCHHHHHHHHHHHH
Confidence 46799999999999999999999999999999999765431 3467789999999999988875
Q ss_pred ---CCCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHHHH----cCCCEEEEeccccccCCCCCCCccCCC
Q 019795 80 ---QKFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAMAK----YNCKKLVFSSSATIYGQPEKIPCVEDF 148 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~v~~Ss~~vyg~~~~~~~~e~~ 148 (335)
.++|++||+||.... ..+.+.++..+++|+.++.++++++.. .+.++||++||...+.
T Consensus 77 ~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~----------- 145 (269)
T 3vtz_A 77 KKYGRIDILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIGHGSIINIASVQSYA----------- 145 (269)
T ss_dssp HHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS-----------
T ss_pred HHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhcc-----------
Confidence 389999999997432 224456678899999999999998643 4567999999988763
Q ss_pred CCCCCChhHHhHHHHHHHHHHHHhhC-CCCeEEEEecccccCC
Q 019795 149 PYGAMNPYGRTKQWCEEIAFDVQKAD-PEWRIILLRYFNPVGA 190 (335)
Q Consensus 149 ~~~~~~~Y~~sK~~~E~~~~~~~~~~-~~~~~~~lR~~~v~G~ 190 (335)
+..+...|+.||...+.+++.++.++ +++++.+++|+.|.++
T Consensus 146 ~~~~~~~Y~asKaa~~~l~~~la~e~~~~i~vn~v~PG~v~T~ 188 (269)
T 3vtz_A 146 ATKNAAAYVTSKHALLGLTRSVAIDYAPKIRCNAVCPGTIMTP 188 (269)
T ss_dssp BCTTCHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCH
T ss_pred CCCCChhHHHHHHHHHHHHHHHHHHhcCCCEEEEEEECCCcCc
Confidence 23445689999999999999988874 4789999999998775
|
| >2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.90 E-value=2.5e-24 Score=180.64 Aligned_cols=163 Identities=15% Similarity=0.134 Sum_probs=129.8
Q ss_pred CeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc-CCCC
Q 019795 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-QKFE 83 (335)
Q Consensus 5 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-~~~d 83 (335)
|++|||||+|+||++++++|+++ +|++++|++.......+.+ .. .++.+|++|++++.++++. .++|
T Consensus 1 k~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~~~~~~~~~~~---------~~-~~~~~D~~~~~~~~~~~~~~~~id 68 (207)
T 2yut_A 1 MRVLITGATGGLGGAFARALKGH--DLLLSGRRAGALAELAREV---------GA-RALPADLADELEAKALLEEAGPLD 68 (207)
T ss_dssp CEEEEETTTSHHHHHHHHHTTTS--EEEEECSCHHHHHHHHHHH---------TC-EECCCCTTSHHHHHHHHHHHCSEE
T ss_pred CEEEEEcCCcHHHHHHHHHHHhC--CEEEEECCHHHHHHHHHhc---------cC-cEEEeeCCCHHHHHHHHHhcCCCC
Confidence 68999999999999999999998 9999998643322222111 11 7888999999999998874 4699
Q ss_pred EEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccCCCCCCCccCCCCCCCCChhHHh
Q 019795 84 AVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRT 159 (335)
Q Consensus 84 ~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~Y~~s 159 (335)
+|||+||.... ..+.++++..+++|+.++.++++++++.+.++||++||...|. +..+...|+.+
T Consensus 69 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~sS~~~~~-----------~~~~~~~Y~~s 137 (207)
T 2yut_A 69 LLVHAVGKAGRASVREAGRDLVEEMLAAHLLTAAFVLKHARFQKGARAVFFGAYPRYV-----------QVPGFAAYAAA 137 (207)
T ss_dssp EEEECCCCCCCBCSCC---CHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEECCCHHHH-----------SSTTBHHHHHH
T ss_pred EEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHhcCCcEEEEEcChhhcc-----------CCCCcchHHHH
Confidence 99999997532 1245567789999999999999999666667999999988773 33456789999
Q ss_pred HHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 160 KQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 160 K~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
|...|.+++.++.+. .+++++++||+.++++
T Consensus 138 K~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~t~ 170 (207)
T 2yut_A 138 KGALEAYLEAARKELLREGVHLVLVRLPAVATG 170 (207)
T ss_dssp HHHHHHHHHHHHHHHHTTTCEEEEECCCCBCSG
T ss_pred HHHHHHHHHHHHHHHhhhCCEEEEEecCcccCC
Confidence 999999999887762 3899999999999886
|
| >3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.90 E-value=4.4e-23 Score=181.17 Aligned_cols=174 Identities=18% Similarity=0.136 Sum_probs=138.6
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc---
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS--- 79 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~--- 79 (335)
++|+||||||+|+||+++++.|+++|++|++++|+........+.+... ...+.++.+|++|++++.++++.
T Consensus 7 ~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~ 81 (280)
T 3tox_A 7 EGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGG-----GGEAAALAGDVGDEALHEALVELAVR 81 (280)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTT-----TCCEEECCCCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc-----CCcEEEEECCCCCHHHHHHHHHHHHH
Confidence 4689999999999999999999999999999999765544444444321 25788999999999999988874
Q ss_pred --CCCCEEEEcccccch-----hhhhcChHHHHHHhHHHHHHHHHHHHH----cCCCEEEEeccccccCCCCCCCccCCC
Q 019795 80 --QKFEAVIHFGALKAV-----AESVQHPFRYFDNNLIGTINLYQAMAK----YNCKKLVFSSSATIYGQPEKIPCVEDF 148 (335)
Q Consensus 80 --~~~d~vi~~a~~~~~-----~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~v~~Ss~~vyg~~~~~~~~e~~ 148 (335)
.++|++||+||.... ..+.++++..+++|+.++.++++++.. .+.++||++||...+..
T Consensus 82 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~---------- 151 (280)
T 3tox_A 82 RFGGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALGGGSLTFTSSFVGHTA---------- 151 (280)
T ss_dssp HHSCCCEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCSBTTTB----------
T ss_pred HcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhCcC----------
Confidence 379999999996421 234567788999999999999998653 34569999999776511
Q ss_pred CCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCCC
Q 019795 149 PYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGAH 191 (335)
Q Consensus 149 ~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~~ 191 (335)
+..+...|+.||...+.+++.++.++ .++++.+++|+.|.++.
T Consensus 152 ~~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~ 196 (280)
T 3tox_A 152 GFAGVAPYAASKAGLIGLVQALAVELGARGIRVNALLPGGTDTPA 196 (280)
T ss_dssp CCTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBSSTT
T ss_pred CCCCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCCCCch
Confidence 23445689999999999999888773 38999999999998873
|
| >3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} | Back alignment and structure |
|---|
Probab=99.90 E-value=9.8e-24 Score=176.40 Aligned_cols=151 Identities=15% Similarity=0.106 Sum_probs=124.7
Q ss_pred CeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc-CCCC
Q 019795 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-QKFE 83 (335)
Q Consensus 5 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-~~~d 83 (335)
|+||||||+|+||++++++|+ +|++|++++|+.. .+.+|++|+++++++++. .++|
T Consensus 4 M~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~----------------------~~~~D~~~~~~~~~~~~~~~~~d 60 (202)
T 3d7l_A 4 MKILLIGASGTLGSAVKERLE-KKAEVITAGRHSG----------------------DVTVDITNIDSIKKMYEQVGKVD 60 (202)
T ss_dssp CEEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS----------------------SEECCTTCHHHHHHHHHHHCCEE
T ss_pred cEEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc----------------------ceeeecCCHHHHHHHHHHhCCCC
Confidence 489999999999999999999 9999999998532 378999999999998874 2589
Q ss_pred EEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHHHHc---CCCEEEEeccccccCCCCCCCccCCCCCCCCChh
Q 019795 84 AVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAMAKY---NCKKLVFSSSATIYGQPEKIPCVEDFPYGAMNPY 156 (335)
Q Consensus 84 ~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~Y 156 (335)
+|||+|+.... ..+.+.++..+++|+.++.++++++.+. + +++|++||...+. +..+...|
T Consensus 61 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~iv~~sS~~~~~-----------~~~~~~~Y 128 (202)
T 3d7l_A 61 AIVSATGSATFSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLNDK-GSFTLTTGIMMED-----------PIVQGASA 128 (202)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEEE-EEEEEECCGGGTS-----------CCTTCHHH
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhccC-CEEEEEcchhhcC-----------CCCccHHH
Confidence 99999996422 1233455678899999999999998775 4 6899999976652 33445689
Q ss_pred HHhHHHHHHHHHHHHhhC-CCCeEEEEecccccCC
Q 019795 157 GRTKQWCEEIAFDVQKAD-PEWRIILLRYFNPVGA 190 (335)
Q Consensus 157 ~~sK~~~E~~~~~~~~~~-~~~~~~~lR~~~v~G~ 190 (335)
+.+|...|.+++.++.+. .++++.++||+.++++
T Consensus 129 ~~sK~~~~~~~~~~~~e~~~gi~v~~v~pg~v~~~ 163 (202)
T 3d7l_A 129 AMANGAVTAFAKSAAIEMPRGIRINTVSPNVLEES 163 (202)
T ss_dssp HHHHHHHHHHHHHHTTSCSTTCEEEEEEECCBGGG
T ss_pred HHHHHHHHHHHHHHHHHccCCeEEEEEecCccCCc
Confidence 999999999999888764 3899999999999886
|
| >3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} | Back alignment and structure |
|---|
Probab=99.90 E-value=2.6e-23 Score=181.28 Aligned_cols=162 Identities=19% Similarity=0.098 Sum_probs=130.9
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
+++|+||||||+|+||++++++|+++|++|++++|+..... ....+.+|++|.+++.++++.
T Consensus 26 l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~----------------~~~~~~~Dv~~~~~~~~~~~~~~ 89 (266)
T 3uxy_A 26 FEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIA----------------ADLHLPGDLREAAYADGLPGAVA 89 (266)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSC----------------CSEECCCCTTSHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH----------------hhhccCcCCCCHHHHHHHHHHHH
Confidence 35689999999999999999999999999999998655432 123457899999988877764
Q ss_pred ---CCCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHH----HHcCCCEEEEeccccccCCCCCCCccCCC
Q 019795 80 ---QKFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAM----AKYNCKKLVFSSSATIYGQPEKIPCVEDF 148 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~ 148 (335)
.++|++||+||.... ..+.++++..+++|+.++.++++++ ++.+.++||++||...+.
T Consensus 90 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~----------- 158 (266)
T 3uxy_A 90 AGLGRLDIVVNNAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAGGGAIVNVASCWGLR----------- 158 (266)
T ss_dssp HHHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTB-----------
T ss_pred HhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCC-----------
Confidence 389999999997532 2345667789999999999999997 445567999999977652
Q ss_pred CCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 149 PYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 149 ~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
+..+...|+.||...+.+++.++.++ .++++.+++|+.|.++
T Consensus 159 ~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~ 202 (266)
T 3uxy_A 159 PGPGHALYCLTKAALASLTQCMGMDHAPQGIRINAVCPNEVNTP 202 (266)
T ss_dssp CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCH
T ss_pred CCCCChHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCCCcch
Confidence 33455689999999999999888764 2799999999999775
|
| >4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A | Back alignment and structure |
|---|
Probab=99.90 E-value=5.4e-23 Score=179.88 Aligned_cols=173 Identities=16% Similarity=0.065 Sum_probs=135.8
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhh-HHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc-
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEA-VDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~- 79 (335)
+++|+||||||+|+||++++++|+++|++|++++|+.....+. .+.+... ..++.++.+|++|++++.++++.
T Consensus 27 l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~v~~~~~~~ 101 (271)
T 4iin_A 27 FTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEK-----GYKAAVIKFDAASESDFIEAIQTI 101 (271)
T ss_dssp CSCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT-----TCCEEEEECCTTCHHHHHHHHHHH
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc-----CCceEEEECCCCCHHHHHHHHHHH
Confidence 4568999999999999999999999999999999964432222 2222221 25789999999999999888874
Q ss_pred ----CCCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHHHH----cCCCEEEEeccccccCCCCCCCccCC
Q 019795 80 ----QKFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAMAK----YNCKKLVFSSSATIYGQPEKIPCVED 147 (335)
Q Consensus 80 ----~~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~v~~Ss~~vyg~~~~~~~~e~ 147 (335)
.++|+|||+||.... ..+.++++..+++|+.++.++++++.. .+.+++|++||...+.
T Consensus 102 ~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~---------- 171 (271)
T 4iin_A 102 VQSDGGLSYLVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSRFGSVVNVASIIGER---------- 171 (271)
T ss_dssp HHHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHH----------
T ss_pred HHhcCCCCEEEECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEechhhcC----------
Confidence 389999999997432 224456778999999999999888643 4557999999976542
Q ss_pred CCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 148 FPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 148 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
+..+...|+.+|.+.+.+++.++.+. .++++.+++|+.+..+
T Consensus 172 -~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~ 215 (271)
T 4iin_A 172 -GNMGQTNYSASKGGMIAMSKSFAYEGALRNIRFNSVTPGFIETD 215 (271)
T ss_dssp -CCTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCC
T ss_pred -CCCCchHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcccCC
Confidence 33455689999999999999888772 3899999999988765
|
| >2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A | Back alignment and structure |
|---|
Probab=99.90 E-value=4.8e-23 Score=179.49 Aligned_cols=162 Identities=16% Similarity=0.084 Sum_probs=132.4
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
+++|+||||||+|+||+++++.|+++|++|++++|+... ..++.++.+|++|+++++++++.
T Consensus 6 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~----------------~~~~~~~~~Dl~~~~~v~~~~~~~~ 69 (264)
T 2dtx_A 6 LRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG----------------EAKYDHIECDVTNPDQVKASIDHIF 69 (264)
T ss_dssp GTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC----------------SCSSEEEECCTTCHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc----------------CCceEEEEecCCCHHHHHHHHHHHH
Confidence 356899999999999999999999999999999997543 04678899999999999888874
Q ss_pred ---CCCCEEEEcccccchh----hhhcChHHHHHHhHHHHHHHHHHHHH----cCCCEEEEeccccccCCCCCCCccCCC
Q 019795 80 ---QKFEAVIHFGALKAVA----ESVQHPFRYFDNNLIGTINLYQAMAK----YNCKKLVFSSSATIYGQPEKIPCVEDF 148 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~v~~Ss~~vyg~~~~~~~~e~~ 148 (335)
.++|+|||+||..... .+.++++..+++|+.++.++++++.. .+.++||++||...+.
T Consensus 70 ~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~----------- 138 (264)
T 2dtx_A 70 KEYGSISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQASI----------- 138 (264)
T ss_dssp HHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGGTS-----------
T ss_pred HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCchhcc-----------
Confidence 3799999999974321 24556778999999999999998764 3457999999987653
Q ss_pred CCCCCChhHHhHHHHHHHHHHHHhhCC-CCeEEEEecccccCC
Q 019795 149 PYGAMNPYGRTKQWCEEIAFDVQKADP-EWRIILLRYFNPVGA 190 (335)
Q Consensus 149 ~~~~~~~Y~~sK~~~E~~~~~~~~~~~-~~~~~~lR~~~v~G~ 190 (335)
+..+...|+.||...+.+++.++.++. .+++.+++|+.+.++
T Consensus 139 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~i~vn~v~PG~v~t~ 181 (264)
T 2dtx_A 139 ITKNASAYVTSKHAVIGLTKSIALDYAPLLRCNAVCPATIDTP 181 (264)
T ss_dssp CCTTBHHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSBCSH
T ss_pred CCCCchhHHHHHHHHHHHHHHHHHHhcCCcEEEEEEeCCCcCc
Confidence 233456899999999999999887751 289999999988664
|
| >1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.90 E-value=5.6e-23 Score=178.30 Aligned_cols=172 Identities=15% Similarity=0.103 Sum_probs=133.8
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc---
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS--- 79 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~--- 79 (335)
|+|++|||||+|+||++++++|+++|++|++++|+........+.+... ..++.++.+|++|++++.++++.
T Consensus 1 m~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~v~~~~~~~~~ 75 (256)
T 1geg_A 1 MKKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQA-----GGHAVAVKVDVSDRDQVFAAVEQARK 75 (256)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-----TCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-----CCcEEEEEecCCCHHHHHHHHHHHHH
Confidence 3689999999999999999999999999999999755444333333321 14688899999999999888874
Q ss_pred --CCCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHHHH----cC-CCEEEEeccccccCCCCCCCccCCC
Q 019795 80 --QKFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAMAK----YN-CKKLVFSSSATIYGQPEKIPCVEDF 148 (335)
Q Consensus 80 --~~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~-~~~~v~~Ss~~vyg~~~~~~~~e~~ 148 (335)
.++|+|||+||.... ..+.++++..+++|+.++.++++++.. .+ .++||++||...+.
T Consensus 76 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~----------- 144 (256)
T 1geg_A 76 TLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHV----------- 144 (256)
T ss_dssp HTTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTS-----------
T ss_pred HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECchhhcC-----------
Confidence 379999999996421 223456778999999999998888654 34 57999999976542
Q ss_pred CCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 149 PYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 149 ~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
+..+...|+.+|...+.+++.++.+. .++++.+++|+.+.++
T Consensus 145 ~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~ 188 (256)
T 1geg_A 145 GNPELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTP 188 (256)
T ss_dssp CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSH
T ss_pred CCCCchhHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCCccc
Confidence 22334579999999999999887663 2799999999998775
|
| >3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} | Back alignment and structure |
|---|
Probab=99.90 E-value=1.6e-23 Score=185.12 Aligned_cols=181 Identities=15% Similarity=0.121 Sum_probs=142.6
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcC-
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQ- 80 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~- 80 (335)
+++|+||||||+|+||++++++|+++|++|++++|+........+.+ ..++.++.+|++|.++++++++..
T Consensus 14 l~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~--------~~~~~~~~~Dl~d~~~v~~~~~~~~ 85 (291)
T 3rd5_A 14 FAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTM--------AGQVEVRELDLQDLSSVRRFADGVS 85 (291)
T ss_dssp CTTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTS--------SSEEEEEECCTTCHHHHHHHHHTCC
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh--------cCCeeEEEcCCCCHHHHHHHHHhcC
Confidence 45789999999999999999999999999999999754433332221 257899999999999999999864
Q ss_pred CCCEEEEcccccch--hhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccCCC-CCC-CccCCCCCCCCChh
Q 019795 81 KFEAVIHFGALKAV--AESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQP-EKI-PCVEDFPYGAMNPY 156 (335)
Q Consensus 81 ~~d~vi~~a~~~~~--~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~-~~~-~~~e~~~~~~~~~Y 156 (335)
++|+|||+||.... ..+.++++..+++|+.++.++++++.....++||++||...+... ... ...+..+..+...|
T Consensus 86 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~riv~isS~~~~~~~~~~~~~~~~~~~~~~~~~Y 165 (291)
T 3rd5_A 86 GADVLINNAGIMAVPYALTVDGFESQIGTNHLGHFALTNLLLPRLTDRVVTVSSMAHWPGRINLEDLNWRSRRYSPWLAY 165 (291)
T ss_dssp CEEEEEECCCCCSCCCCBCTTSCBHHHHHHTHHHHHHHHHHGGGEEEEEEEECCGGGTTCCCCSSCTTCSSSCCCHHHHH
T ss_pred CCCEEEECCcCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeEeechhhccCCCCcccccccccCCCCcchH
Confidence 78999999997532 234567789999999999999999988766799999998776432 211 22222344556679
Q ss_pred HHhHHHHHHHHHHHHhhCC--C--CeEEEEecccccCC
Q 019795 157 GRTKQWCEEIAFDVQKADP--E--WRIILLRYFNPVGA 190 (335)
Q Consensus 157 ~~sK~~~E~~~~~~~~~~~--~--~~~~~lR~~~v~G~ 190 (335)
+.||.+.+.+++.++.++. + +++.+++|+.|..+
T Consensus 166 ~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~PG~v~T~ 203 (291)
T 3rd5_A 166 SQSKLANLLFTSELQRRLTAAGSPLRALAAHPGYSHTN 203 (291)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCCEEEEECCSGGGSC
T ss_pred HHHHHHHHHHHHHHHHHHhhCCCCEEEEEeeCCCCccc
Confidence 9999999999998877641 3 89999999998765
|
| >3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A | Back alignment and structure |
|---|
Probab=99.90 E-value=1e-23 Score=183.88 Aligned_cols=170 Identities=14% Similarity=0.076 Sum_probs=130.9
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
+++|+||||||+|+||+++++.|+++|++|++++|+.....+..+.+ ..++.++.+|++|+++++++++.
T Consensus 25 l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~--------~~~~~~~~~Dv~d~~~v~~~~~~~~ 96 (266)
T 3grp_A 25 LTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADL--------GKDVFVFSANLSDRKSIKQLAEVAE 96 (266)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH--------CSSEEEEECCTTSHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh--------CCceEEEEeecCCHHHHHHHHHHHH
Confidence 35689999999999999999999999999999998654433322221 25788999999999999988874
Q ss_pred ---CCCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHHH----HcCCCEEEEeccccccCCCCCCCccCCC
Q 019795 80 ---QKFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAMA----KYNCKKLVFSSSATIYGQPEKIPCVEDF 148 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~v~~Ss~~vyg~~~~~~~~e~~ 148 (335)
.++|+|||+||.... ..+.++++..+++|+.++.++++++. +.+.++||++||...+.
T Consensus 97 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~Iv~isS~~~~~----------- 165 (266)
T 3grp_A 97 REMEGIDILVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRRYGRIINITSIVGVV----------- 165 (266)
T ss_dssp HHHTSCCEEEECCCCC-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCC---------------
T ss_pred HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEECCHHHcC-----------
Confidence 389999999997532 22456778899999999888887753 34567999999976541
Q ss_pred CCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 149 PYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 149 ~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
+..+...|+.||...+.+++.++.++ .++++.+++|+.|.++
T Consensus 166 ~~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~t~ 209 (266)
T 3grp_A 166 GNPGQTNYCAAKAGLIGFSKALAQEIASRNITVNCIAPGFIKSA 209 (266)
T ss_dssp ---CHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSH
T ss_pred CCCCchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCcCCCc
Confidence 22344679999999999999888763 2799999999998775
|
| >1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.90 E-value=5.3e-23 Score=180.11 Aligned_cols=174 Identities=16% Similarity=0.125 Sum_probs=136.3
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
+++|++|||||+|+||++++++|+++|++|++++|+........+.+... ..++.++.+|++|++++.++++.
T Consensus 19 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~ 93 (273)
T 1ae1_A 19 LKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREK-----GLNVEGSVCDLLSRTERDKLMQTVA 93 (273)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-----TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-----CCceEEEECCCCCHHHHHHHHHHHH
Confidence 45789999999999999999999999999999999755444333333321 14688999999999999888753
Q ss_pred ----CCCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHHH----HcCCCEEEEeccccccCCCCCCCccCC
Q 019795 80 ----QKFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAMA----KYNCKKLVFSSSATIYGQPEKIPCVED 147 (335)
Q Consensus 80 ----~~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~v~~Ss~~vyg~~~~~~~~e~ 147 (335)
.++|++||+||.... ..+.++++..+++|+.++.++++++. +.+.++||++||...+.
T Consensus 94 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~---------- 163 (273)
T 1ae1_A 94 HVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFS---------- 163 (273)
T ss_dssp HHTTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTS----------
T ss_pred HHcCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHhhcC----------
Confidence 489999999997432 12345677899999999999999874 34567999999988763
Q ss_pred CCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCCC
Q 019795 148 FPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGAH 191 (335)
Q Consensus 148 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~~ 191 (335)
+..+...|+.+|...+.+++.++.+. .++++.+++|+.++++.
T Consensus 164 -~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 208 (273)
T 1ae1_A 164 -ALPSVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPL 208 (273)
T ss_dssp -CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC---
T ss_pred -CCCCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCch
Confidence 22345689999999999999887663 28999999999998873
|
| >2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.90 E-value=1.2e-22 Score=175.55 Aligned_cols=164 Identities=21% Similarity=0.224 Sum_probs=130.9
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
+++|++|||||+|+||+++++.|+++|++|++++|+.... . .++.++.+|++|++++.++++.
T Consensus 5 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~-------------~--~~~~~~~~D~~d~~~~~~~~~~~~ 69 (250)
T 2fwm_X 5 FSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQE-------------Q--YPFATEVMDVADAAQVAQVCQRLL 69 (250)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCSS-------------C--CSSEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhhh-------------c--CCceEEEcCCCCHHHHHHHHHHHH
Confidence 4678999999999999999999999999999999975420 0 1277899999999999988874
Q ss_pred ---CCCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHH----HHcCCCEEEEeccccccCCCCCCCccCCC
Q 019795 80 ---QKFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAM----AKYNCKKLVFSSSATIYGQPEKIPCVEDF 148 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~ 148 (335)
.++|+|||+||.... ..+.++++..+++|+.++.++++++ ++.+.++||++||...+.
T Consensus 70 ~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~----------- 138 (250)
T 2fwm_X 70 AETERLDALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQRGGAIVTVASDAAHT----------- 138 (250)
T ss_dssp HHCSCCCEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTS-----------
T ss_pred HHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcCCCEEEEECchhhCC-----------
Confidence 379999999997432 1244567789999999999999987 445567999999987652
Q ss_pred CCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCCC
Q 019795 149 PYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGAH 191 (335)
Q Consensus 149 ~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~~ 191 (335)
+..+...|+.+|...+.+++.++.+. .++++.++||+.++++.
T Consensus 139 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 183 (250)
T 2fwm_X 139 PRIGMSAYGASKAALKSLALSVGLELAGSGVRCNVVSPGSTDTDM 183 (250)
T ss_dssp CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC----
T ss_pred CCCCCchHHHHHHHHHHHHHHHHHHhCccCCEEEEEECCcccCcc
Confidence 33445689999999999999887763 28999999999998873
|
| >2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=5.4e-23 Score=180.42 Aligned_cols=173 Identities=13% Similarity=0.104 Sum_probs=136.6
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
+++|++|||||+|+||++++++|+++|++|++++|+........+.+... ..++.++.+|++|++++.++++.
T Consensus 20 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~ 94 (277)
T 2rhc_B 20 QDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREA-----GVEADGRTCDVRSVPEIEALVAAVV 94 (277)
T ss_dssp TTSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-----TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-----CCceEEEECCCCCHHHHHHHHHHHH
Confidence 46689999999999999999999999999999999765444333333321 14688899999999998888774
Q ss_pred ---CCCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHHHHc------CCCEEEEeccccccCCCCCCCccC
Q 019795 80 ---QKFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAMAKY------NCKKLVFSSSATIYGQPEKIPCVE 146 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~~------~~~~~v~~Ss~~vyg~~~~~~~~e 146 (335)
.++|+|||+||.... ..+.++++..+++|+.++.++++++... +.++||++||...+.
T Consensus 95 ~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~~g~iv~isS~~~~~--------- 165 (277)
T 2rhc_B 95 ERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQ--------- 165 (277)
T ss_dssp HHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHTEEEEEEECCGGGTS---------
T ss_pred HHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcCCeEEEEECcccccc---------
Confidence 379999999997432 2234566789999999999999997654 557999999976542
Q ss_pred CCCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 147 DFPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 147 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
+..+...|+.+|...+.+++.++.+. .++++.+++|+.++++
T Consensus 166 --~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~ 209 (277)
T 2rhc_B 166 --GVVHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETP 209 (277)
T ss_dssp --CCTTCHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEEECSBCSH
T ss_pred --CCCCCccHHHHHHHHHHHHHHHHHHHHHhCcEEEEEecCcCcCc
Confidence 22345689999999999999888763 2789999999998775
|
| >1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=5.2e-23 Score=178.89 Aligned_cols=173 Identities=17% Similarity=0.136 Sum_probs=134.8
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEec-CCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc-
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDN-LHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~- 79 (335)
+++|+||||||+|+||++++++|+++|++|++++| +........+.+... ..++.++.+|++|++++.++++.
T Consensus 5 l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~-----~~~~~~~~~D~~~~~~~~~~~~~~ 79 (261)
T 1gee_A 5 LEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKV-----GGEAIAVKGDVTVESDVINLVQSA 79 (261)
T ss_dssp GTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT-----TCEEEEEECCTTSHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhc-----CCceEEEECCCCCHHHHHHHHHHH
Confidence 45689999999999999999999999999999998 433333333333221 14688999999999998888764
Q ss_pred ----CCCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHHHH----cC-CCEEEEeccccccCCCCCCCccC
Q 019795 80 ----QKFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAMAK----YN-CKKLVFSSSATIYGQPEKIPCVE 146 (335)
Q Consensus 80 ----~~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~-~~~~v~~Ss~~vyg~~~~~~~~e 146 (335)
.++|+|||+||.... ..+.++++..+++|+.++.++++++.. .+ .++||++||...+.
T Consensus 80 ~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~--------- 150 (261)
T 1gee_A 80 IKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKI--------- 150 (261)
T ss_dssp HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTS---------
T ss_pred HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHhcC---------
Confidence 279999999997432 223456778999999999999888654 34 57999999976542
Q ss_pred CCCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 147 DFPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 147 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
+..+...|+.+|...+.+++.++.+. .++++.++||+.++++
T Consensus 151 --~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~ 194 (261)
T 1gee_A 151 --PWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTP 194 (261)
T ss_dssp --CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSG
T ss_pred --CCCCccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCcCCc
Confidence 34456789999999999988877653 2799999999999887
|
| >2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=6.9e-23 Score=177.36 Aligned_cols=172 Identities=12% Similarity=0.055 Sum_probs=133.6
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccce-eEEEccCCCHHHHHHHHhc-
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKL-EFHVGDLRNKDDLDKLFSS- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i-~~~~~Dl~d~~~~~~~~~~- 79 (335)
+++|++|||||+|+||+++++.|+++|++|++++|+........+.+ +..+ .++.+|++|.++++++++.
T Consensus 9 ~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~--------~~~~~~~~~~D~~~~~~~~~~~~~~ 80 (254)
T 2wsb_A 9 LDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQEL--------GAAVAARIVADVTDAEAMTAAAAEA 80 (254)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH--------GGGEEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh--------cccceeEEEEecCCHHHHHHHHHHH
Confidence 35689999999999999999999999999999999754333222222 1355 8899999999999888764
Q ss_pred ---CCCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHHH----HcCCCEEEEeccccccCCCCCCCccCCC
Q 019795 80 ---QKFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAMA----KYNCKKLVFSSSATIYGQPEKIPCVEDF 148 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~v~~Ss~~vyg~~~~~~~~e~~ 148 (335)
.++|+|||+||.... ..+.+.++..+++|+.++.++++++. +.+.++||++||...+...
T Consensus 81 ~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~--------- 151 (254)
T 2wsb_A 81 EAVAPVSILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARGAGAIVNLGSMSGTIVN--------- 151 (254)
T ss_dssp HHHSCCCEEEECCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC---------
T ss_pred HhhCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEecchhccCC---------
Confidence 479999999997432 12344567889999999888888753 4466899999998765321
Q ss_pred CCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 149 PYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 149 ~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
+..+...|+.+|...|.+++.++.+. .+++++++||+.++++
T Consensus 152 ~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~Pg~v~t~ 195 (254)
T 2wsb_A 152 RPQFASSYMASKGAVHQLTRALAAEWAGRGVRVNALAPGYVATE 195 (254)
T ss_dssp SSSCBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSH
T ss_pred CCCcchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecccCch
Confidence 22334689999999999999887663 2799999999999886
|
| >3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.90 E-value=7.9e-23 Score=177.31 Aligned_cols=173 Identities=16% Similarity=0.118 Sum_probs=134.6
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEe-cCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc-
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLID-NLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~-r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~- 79 (335)
.++|+||||||+|+||+++++.|+++|++|++++ |+..........+... ..++.++.+|++|.++++++++.
T Consensus 11 ~~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~ 85 (256)
T 3ezl_A 11 MSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKAL-----GFDFYASEGNVGDWDSTKQAFDKV 85 (256)
T ss_dssp --CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHT-----TCCCEEEECCTTCHHHHHHHHHHH
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc-----CCeeEEEecCCCCHHHHHHHHHHH
Confidence 4678999999999999999999999999999988 4444444434443322 25788999999999999888875
Q ss_pred ----CCCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHH----HHcCCCEEEEeccccccCCCCCCCccCC
Q 019795 80 ----QKFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAM----AKYNCKKLVFSSSATIYGQPEKIPCVED 147 (335)
Q Consensus 80 ----~~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~v~~Ss~~vyg~~~~~~~~e~ 147 (335)
.++|+|||+||.... ..+.++++..+++|+.++.++++++ ++.+.++||++||...+.
T Consensus 86 ~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~---------- 155 (256)
T 3ezl_A 86 KAEVGEIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQK---------- 155 (256)
T ss_dssp HHHTCCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCGGG----------
T ss_pred HHhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhcc----------
Confidence 379999999997432 2244667789999999999988875 344567999999976542
Q ss_pred CCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 148 FPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 148 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
+..+...|+.||.+.+.+++.++.+. .++++.+++|+.+..+
T Consensus 156 -~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~ 199 (256)
T 3ezl_A 156 -GQFGQTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTD 199 (256)
T ss_dssp -SCSCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCH
T ss_pred -CCCCCcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEEECcccCc
Confidence 33455689999999999999888763 2789999999988765
|
| >3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} | Back alignment and structure |
|---|
Probab=99.90 E-value=1.4e-22 Score=176.38 Aligned_cols=173 Identities=17% Similarity=0.094 Sum_probs=137.0
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
+++|+||||||+|+||+++++.|+++|++|++++|+........+.+... ...+.++.+|++|++++.++++.
T Consensus 27 l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~v~~~~~~~~ 101 (262)
T 3rkr_A 27 LSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAA-----GGEAESHACDLSHSDAIAAFATGVL 101 (262)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-----TCEEEEEECCTTCHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHh-----CCceeEEEecCCCHHHHHHHHHHHH
Confidence 45689999999999999999999999999999999766555554444432 25788999999999999988875
Q ss_pred ---CCCCEEEEccccc-----chhhhhcChHHHHHHhHHHHHHHHHHHHH----cCCCEEEEeccccccCCCCCCCccCC
Q 019795 80 ---QKFEAVIHFGALK-----AVAESVQHPFRYFDNNLIGTINLYQAMAK----YNCKKLVFSSSATIYGQPEKIPCVED 147 (335)
Q Consensus 80 ---~~~d~vi~~a~~~-----~~~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~v~~Ss~~vyg~~~~~~~~e~ 147 (335)
.++|+|||+||.. ....+.++++..+++|+.++.++++++.. .+.++||++||...+.
T Consensus 102 ~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~---------- 171 (262)
T 3rkr_A 102 AAHGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAKRGHIINISSLAGKN---------- 171 (262)
T ss_dssp HHHSCCSEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCEEEEECSSCSSC----------
T ss_pred HhcCCCCEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCceEEEEechhhcC----------
Confidence 3799999999972 12234566778999999999999998643 4567999999977652
Q ss_pred CCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 148 FPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 148 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
+..+...|+.+|...+.+++.++.+. .++++.+++|+.|..+
T Consensus 172 -~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~v~~v~PG~v~t~ 215 (262)
T 3rkr_A 172 -PVADGAAYTASKWGLNGLMTSAAEELRQHQVRVSLVAPGSVRTE 215 (262)
T ss_dssp -CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC---
T ss_pred -CCCCCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCCcCC
Confidence 33455689999999999999888663 2899999999988654
|
| >2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.90 E-value=9.5e-23 Score=175.47 Aligned_cols=173 Identities=14% Similarity=0.113 Sum_probs=135.9
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCC-------eEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHH
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGF-------KVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDK 75 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~-------~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~ 75 (335)
++|+||||||+|+||+++++.|+++|+ +|++++|+..........+... ..++.++.+|++|++++.+
T Consensus 1 ~~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~v~~ 75 (244)
T 2bd0_A 1 MKHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAE-----GALTDTITADISDMADVRR 75 (244)
T ss_dssp -CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTT-----TCEEEEEECCTTSHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHcc-----CCeeeEEEecCCCHHHHHH
Confidence 368999999999999999999999999 9999998654433333333211 2568899999999999988
Q ss_pred HHhc-----CCCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHHHH----cCCCEEEEeccccccCCCCCC
Q 019795 76 LFSS-----QKFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAMAK----YNCKKLVFSSSATIYGQPEKI 142 (335)
Q Consensus 76 ~~~~-----~~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~v~~Ss~~vyg~~~~~ 142 (335)
+++. .++|+|||+||.... ..+.++++..+++|+.++.++++++.. .+.++||++||...+.
T Consensus 76 ~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~----- 150 (244)
T 2bd0_A 76 LTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATK----- 150 (244)
T ss_dssp HHHHHHHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS-----
T ss_pred HHHHHHHhCCCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEEecchhcC-----
Confidence 8874 379999999997432 224456778999999999999998743 4567999999988763
Q ss_pred CccCCCCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCCC
Q 019795 143 PCVEDFPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGAH 191 (335)
Q Consensus 143 ~~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~~ 191 (335)
+..+...|+.+|...+.+++.++.+. .++++.++||+.++++.
T Consensus 151 ------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 195 (244)
T 2bd0_A 151 ------AFRHSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPM 195 (244)
T ss_dssp ------CCTTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTT
T ss_pred ------CCCCCchhHHHHHHHHHHHHHHHHHhhccCcEEEEEECCCccchh
Confidence 23445689999999999998776642 28999999999999873
|
| >2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=1.3e-22 Score=176.84 Aligned_cols=170 Identities=16% Similarity=0.218 Sum_probs=137.2
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
+++|+||||||+|+||+++++.|+++|++|++++|+........+.+ + .++.++.+|++|++++.++++.
T Consensus 10 ~~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----~----~~~~~~~~D~~~~~~v~~~~~~~~ 81 (265)
T 2o23_A 10 VKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKL----G----NNCVFAPADVTSEKDVQTALALAK 81 (265)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHH----C----TTEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHh----C----CceEEEEcCCCCHHHHHHHHHHHH
Confidence 45789999999999999999999999999999999876654443332 1 5688999999999999988874
Q ss_pred ---CCCCEEEEcccccchh----------hhhcChHHHHHHhHHHHHHHHHHHHHc----------CCCEEEEecccccc
Q 019795 80 ---QKFEAVIHFGALKAVA----------ESVQHPFRYFDNNLIGTINLYQAMAKY----------NCKKLVFSSSATIY 136 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~~~----------~~~~~~~~~~~~nv~~~~~l~~~~~~~----------~~~~~v~~Ss~~vy 136 (335)
.++|+|||+||..... .+.++++..+++|+.++.++++++... +.++||++||...+
T Consensus 82 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~ 161 (265)
T 2o23_A 82 GKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAF 161 (265)
T ss_dssp HHHSCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHH
T ss_pred HHCCCCCEEEECCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCCCcEEEEeCChhhc
Confidence 2799999999974321 234567789999999999999997754 45789999998765
Q ss_pred CCCCCCCccCCCCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 137 GQPEKIPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 137 g~~~~~~~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
. +..+...|+.+|...+.+++.++.+. .++++.+++|+.+.++
T Consensus 162 ~-----------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~ 206 (265)
T 2o23_A 162 E-----------GQVGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTP 206 (265)
T ss_dssp H-----------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC
T ss_pred C-----------CCCCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccccCc
Confidence 3 22345689999999999998877663 2799999999998776
|
| >2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=1.2e-22 Score=175.53 Aligned_cols=170 Identities=14% Similarity=0.134 Sum_probs=132.5
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCC-CCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc-
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLH-NSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~- 79 (335)
+++|++|||||+|+||+++++.|+++|++|++++|++ .... +.+... ..++.++.+|++|+++++++++.
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~---~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~ 76 (249)
T 2ew8_A 5 LKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAE---AAIRNL-----GRRVLTVKCDVSQPGDVEAFGKQV 76 (249)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHH---HHHHHT-----TCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHH---HHHHhc-----CCcEEEEEeecCCHHHHHHHHHHH
Confidence 4578999999999999999999999999999999975 2221 122221 15688999999999999888763
Q ss_pred ----CCCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHH----HHHcCCCEEEEeccccccCCCCCCCccCC
Q 019795 80 ----QKFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQA----MAKYNCKKLVFSSSATIYGQPEKIPCVED 147 (335)
Q Consensus 80 ----~~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~----~~~~~~~~~v~~Ss~~vyg~~~~~~~~e~ 147 (335)
.++|+|||+||.... ..+.++++..+++|+.++.+++++ +++.+.++||++||...+.
T Consensus 77 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~---------- 146 (249)
T 2ew8_A 77 ISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWL---------- 146 (249)
T ss_dssp HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGS----------
T ss_pred HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhcc----------
Confidence 479999999997432 224556778999999999999888 4455667999999987763
Q ss_pred CCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 148 FPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 148 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
+..+...|+.||...+.+++.++.+. .++++.+++|+.+.++
T Consensus 147 -~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~ 190 (249)
T 2ew8_A 147 -KIEAYTHYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTA 190 (249)
T ss_dssp -CCSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC---
T ss_pred -CCCCchhHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcCcCc
Confidence 23345689999999999999888763 2799999999999876
|
| >3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=2.7e-23 Score=176.23 Aligned_cols=154 Identities=14% Similarity=0.155 Sum_probs=121.1
Q ss_pred CCCeEEEEcCCChhhHHHHHHHH-hCCCeEEEEecCCC-CchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcC
Q 019795 3 SEKNILVTGGAGFIGTHCALQLL-QGGFKVVLIDNLHN-SVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQ 80 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~-~~g~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~ 80 (335)
|||+|+||||||+||++++++|+ +.|++|++++|++. ...... . . ..++.++.+|++|++++.++++
T Consensus 4 mmk~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~----~-~----~~~~~~~~~D~~d~~~~~~~~~-- 72 (221)
T 3r6d_A 4 MYXYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEI----I-D----HERVTVIEGSFQNPGXLEQAVT-- 72 (221)
T ss_dssp SCSEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHH----H-T----STTEEEEECCTTCHHHHHHHHT--
T ss_pred eEEEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhc----c-C----CCceEEEECCCCCHHHHHHHHc--
Confidence 46779999999999999999999 89999999999744 322211 0 1 1678999999999999999998
Q ss_pred CCCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccCCCCCCCccCCCCCCCCC-hhHHh
Q 019795 81 KFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQPEKIPCVEDFPYGAMN-PYGRT 159 (335)
Q Consensus 81 ~~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~-~Y~~s 159 (335)
++|+|||+|+.. |+. +.+++++|++.++++||++||..+|+..+.. ..+... .... .|+.+
T Consensus 73 ~~d~vv~~ag~~---------------n~~-~~~~~~~~~~~~~~~iv~iSs~~~~~~~~~~-~~~~~~-~~~~~~y~~~ 134 (221)
T 3r6d_A 73 NAEVVFVGAMES---------------GSD-MASIVKALSRXNIRRVIGVSMAGLSGEFPVA-LEKWTF-DNLPISYVQG 134 (221)
T ss_dssp TCSEEEESCCCC---------------HHH-HHHHHHHHHHTTCCEEEEEEETTTTSCSCHH-HHHHHH-HTSCHHHHHH
T ss_pred CCCEEEEcCCCC---------------Chh-HHHHHHHHHhcCCCeEEEEeeceecCCCCcc-cccccc-cccccHHHHH
Confidence 899999999863 444 8899999999998999999999988643210 000000 1122 79999
Q ss_pred HHHHHHHHHHHHhhCCCCeEEEEecccccCC
Q 019795 160 KQWCEEIAFDVQKADPEWRIILLRYFNPVGA 190 (335)
Q Consensus 160 K~~~E~~~~~~~~~~~~~~~~~lR~~~v~G~ 190 (335)
|..+|.+++. . +++++++||+.++++
T Consensus 135 K~~~e~~~~~----~-~i~~~~vrpg~v~~~ 160 (221)
T 3r6d_A 135 ERQARNVLRE----S-NLNYTILRLTWLYND 160 (221)
T ss_dssp HHHHHHHHHH----S-CSEEEEEEECEEECC
T ss_pred HHHHHHHHHh----C-CCCEEEEechhhcCC
Confidence 9999998864 3 999999999999986
|
| >4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=99.90 E-value=9.1e-23 Score=175.69 Aligned_cols=164 Identities=18% Similarity=0.179 Sum_probs=131.9
Q ss_pred CCCCCeEEEEcCCChhhHHHHHHHHh-CCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc
Q 019795 1 MASEKNILVTGGAGFIGTHCALQLLQ-GGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS 79 (335)
Q Consensus 1 ~~~~~~vlItGatG~iG~~l~~~L~~-~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~ 79 (335)
+.+||++|||||+|+||+++++.|++ .|+.|++.+|+..... ..+.++.+|++|++++.++++.
T Consensus 1 s~~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~~~---------------~~~~~~~~Dv~~~~~v~~~~~~ 65 (244)
T 4e4y_A 1 SNAMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFSA---------------ENLKFIKADLTKQQDITNVLDI 65 (244)
T ss_dssp --CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCCCC---------------TTEEEEECCTTCHHHHHHHHHH
T ss_pred CCCCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEecccccccc---------------ccceEEecCcCCHHHHHHHHHH
Confidence 45789999999999999999999999 7899999988654211 4578899999999999988863
Q ss_pred ---CCCCEEEEcccccc----hhhhhcChHHHHHHhHHHHHHHHHHHHHcC--CCEEEEeccccccCCCCCCCccCCCCC
Q 019795 80 ---QKFEAVIHFGALKA----VAESVQHPFRYFDNNLIGTINLYQAMAKYN--CKKLVFSSSATIYGQPEKIPCVEDFPY 150 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~----~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~--~~~~v~~Ss~~vyg~~~~~~~~e~~~~ 150 (335)
.++|++||+||... ...+.++++..+++|+.++.++++++...- ..++|++||...+. +.
T Consensus 66 ~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~-----------~~ 134 (244)
T 4e4y_A 66 IKNVSFDGIFLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVGASIVFNGSDQCFI-----------AK 134 (244)
T ss_dssp TTTCCEEEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEEEEEEEECCGGGTC-----------CC
T ss_pred HHhCCCCEEEECCccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccCcEEEEECCHHHcc-----------CC
Confidence 37999999999742 233456777899999999999999987642 14899999977652 23
Q ss_pred CCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 151 GAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 151 ~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
.+...|+.||...+.+++.++.+. .++++.+++|+.|..+
T Consensus 135 ~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~ 176 (244)
T 4e4y_A 135 PNSFAYTLSKGAIAQMTKSLALDLAKYQIRVNTVCPGTVDTD 176 (244)
T ss_dssp TTBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESCBCCH
T ss_pred CCCchhHHHHHHHHHHHHHHHHHHHHcCeEEEEEecCccCch
Confidence 344689999999999999888753 2799999999998765
|
| >1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.89 E-value=1.2e-22 Score=177.26 Aligned_cols=175 Identities=14% Similarity=0.142 Sum_probs=136.3
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
+++|++|||||+|+||+++++.|+++|++|++++|+........+.+.+... ..++.++.+|++|+++++++++.
T Consensus 11 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~ 87 (267)
T 1iy8_A 11 FTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAP---DAEVLTTVADVSDEAQVEAYVTATT 87 (267)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCT---TCCEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcC---CceEEEEEccCCCHHHHHHHHHHHH
Confidence 4678999999999999999999999999999999976544443333332210 15688999999999999888874
Q ss_pred ---CCCCEEEEcccccch-----hhhhcChHHHHHHhHHHHHHHHHHH----HHcCCCEEEEeccccccCCCCCCCccCC
Q 019795 80 ---QKFEAVIHFGALKAV-----AESVQHPFRYFDNNLIGTINLYQAM----AKYNCKKLVFSSSATIYGQPEKIPCVED 147 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~~-----~~~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~v~~Ss~~vyg~~~~~~~~e~ 147 (335)
.++|+|||+||.... ..+.++++..+++|+.++.++++++ ++.+.++||++||...+.
T Consensus 88 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~---------- 157 (267)
T 1iy8_A 88 ERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIR---------- 157 (267)
T ss_dssp HHHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTS----------
T ss_pred HHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcc----------
Confidence 379999999997432 2234567789999999999877764 445668999999977652
Q ss_pred CCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 148 FPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 148 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
+..+...|+.+|...+.+++.++.+. .++++.+++|+.++++
T Consensus 158 -~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~ 201 (267)
T 1iy8_A 158 -GIGNQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTP 201 (267)
T ss_dssp -BCSSBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSH
T ss_pred -CCCCCccHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEeCCCcCc
Confidence 22345689999999999999887663 2899999999998775
|
| >1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.89 E-value=6.7e-22 Score=170.36 Aligned_cols=167 Identities=17% Similarity=0.148 Sum_probs=131.3
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
+++|++|||||+|+||++++++|+++|++|++++|+........+. -++.++.+|++|+++++++++.
T Consensus 3 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~----------~~~~~~~~D~~~~~~~~~~~~~~~ 72 (245)
T 1uls_A 3 LKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEA----------VGAHPVVMDVADPASVERGFAEAL 72 (245)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHT----------TTCEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH----------cCCEEEEecCCCHHHHHHHHHHHH
Confidence 5679999999999999999999999999999999864332221111 1367899999999999888774
Q ss_pred ---CCCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHHHHc----CCCEEEEeccccccCCCCCCCccCCC
Q 019795 80 ---QKFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAMAKY----NCKKLVFSSSATIYGQPEKIPCVEDF 148 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~~v~~Ss~~vyg~~~~~~~~e~~ 148 (335)
.++|+|||+||.... ..+.++++..+++|+.++.++++++... +.++||++||...++
T Consensus 73 ~~~g~id~lvn~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~----------- 141 (245)
T 1uls_A 73 AHLGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRVYLG----------- 141 (245)
T ss_dssp HHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGGGGC-----------
T ss_pred HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEccchhcC-----------
Confidence 369999999997431 2234567789999999999999987543 457999999977443
Q ss_pred CCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 149 PYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 149 ~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
..+...|+.+|...+.+++.++.+. .++++.+++|+.+..+
T Consensus 142 -~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~ 184 (245)
T 1uls_A 142 -NLGQANYAASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETR 184 (245)
T ss_dssp -CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCT
T ss_pred -CCCchhHHHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCcCc
Confidence 2234579999999999998887663 2799999999998765
|
| >1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A | Back alignment and structure |
|---|
Probab=99.89 E-value=1e-22 Score=175.64 Aligned_cols=162 Identities=19% Similarity=0.173 Sum_probs=127.8
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
+++|+||||||+|+||++++++|+++|++|++++|+..... .+..+.+|++|+++++++++.
T Consensus 13 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~----------------~~~~~~~D~~~~~~~~~~~~~~~ 76 (247)
T 1uzm_A 13 FVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPK----------------GLFGVEVDVTDSDAVDRAFTAVE 76 (247)
T ss_dssp CCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT----------------TSEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHH----------------HhcCeeccCCCHHHHHHHHHHHH
Confidence 45789999999999999999999999999999999765432 122488999999999888774
Q ss_pred ---CCCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHHHH----cCCCEEEEeccccccCCCCCCCccCCC
Q 019795 80 ---QKFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAMAK----YNCKKLVFSSSATIYGQPEKIPCVEDF 148 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~v~~Ss~~vyg~~~~~~~~e~~ 148 (335)
.++|++||+||.... ..+.++++..+++|+.++.++++++.. .+.++||++||...+.
T Consensus 77 ~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~----------- 145 (247)
T 1uzm_A 77 EHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLW----------- 145 (247)
T ss_dssp HHHSSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC-------------
T ss_pred HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEECCHhhcc-----------
Confidence 378999999997532 224456778999999999999998653 4567999999976431
Q ss_pred CCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 149 PYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 149 ~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
+..+...|+.+|...+.+++.++.+. .++++.+++|+.+.++
T Consensus 146 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~ 189 (247)
T 1uzm_A 146 GIGNQANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTD 189 (247)
T ss_dssp ---CCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCH
T ss_pred CCCCChhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCCccc
Confidence 12344689999999999999887763 2799999999988664
|
| >3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.89 E-value=1.4e-22 Score=178.18 Aligned_cols=174 Identities=17% Similarity=0.088 Sum_probs=139.1
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc---
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS--- 79 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~--- 79 (335)
++|++|||||+|+||+++++.|+++|++|++++|+........+.+... ...+.++.+|++|+++++++++.
T Consensus 27 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~-----~~~~~~~~~Dv~d~~~v~~~~~~~~~ 101 (283)
T 3v8b_A 27 PSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGA-----GGQAIALEADVSDELQMRNAVRDLVL 101 (283)
T ss_dssp CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTT-----TCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-----CCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 4689999999999999999999999999999999765554444444322 25788999999999999888875
Q ss_pred --CCCCEEEEcccccch-----hhhhcChHHHHHHhHHHHHHHHHHH----HHcCCCEEEEeccccccCCCCCCCccCCC
Q 019795 80 --QKFEAVIHFGALKAV-----AESVQHPFRYFDNNLIGTINLYQAM----AKYNCKKLVFSSSATIYGQPEKIPCVEDF 148 (335)
Q Consensus 80 --~~~d~vi~~a~~~~~-----~~~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~ 148 (335)
.++|++||+||.... ..+.++++..+++|+.++.++++++ ++.+.++||++||...+.. .
T Consensus 102 ~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~---------~ 172 (283)
T 3v8b_A 102 KFGHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRGGGAIVVVSSINGTRT---------F 172 (283)
T ss_dssp HHSCCCEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTB---------C
T ss_pred HhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCceEEEEcChhhccC---------C
Confidence 389999999997422 2345567789999999999999987 4455679999999765421 1
Q ss_pred CCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 149 PYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 149 ~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
+..+...|+.||...+.+++.++.+. .++++.+++|+.|..+
T Consensus 173 ~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~ 216 (283)
T 3v8b_A 173 TTPGATAYTATKAAQVAIVQQLALELGKHHIRVNAVCPGAIETN 216 (283)
T ss_dssp CSTTCHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECSBSSC
T ss_pred CCCCchHHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCcCC
Confidence 23345689999999999999998874 2789999999999776
|
| >1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.89 E-value=1.6e-22 Score=176.43 Aligned_cols=174 Identities=17% Similarity=0.176 Sum_probs=135.3
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
+++|++|||||+|+||+++++.|+++|++|++++|+..........+....+ ..+.++.+|++|+++++++++.
T Consensus 19 l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~----~~~~~~~~Dl~~~~~v~~~~~~~~ 94 (267)
T 1vl8_A 19 LRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYG----VETMAFRCDVSNYEEVKKLLEAVK 94 (267)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHC----CCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcC----CeEEEEEcCCCCHHHHHHHHHHHH
Confidence 5679999999999999999999999999999999975444333333311111 4678899999999999888774
Q ss_pred ---CCCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHHHH----cCCCEEEEeccccc-cCCCCCCCccCC
Q 019795 80 ---QKFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAMAK----YNCKKLVFSSSATI-YGQPEKIPCVED 147 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~v~~Ss~~v-yg~~~~~~~~e~ 147 (335)
.++|+|||+||.... ..+.++++..+++|+.++.++++++.. .+.++||++||..+ +
T Consensus 95 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~----------- 163 (267)
T 1vl8_A 95 EKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEE----------- 163 (267)
T ss_dssp HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTC-----------
T ss_pred HHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCcchhc-----------
Confidence 379999999997432 223456678999999999999998643 45679999999763 2
Q ss_pred CCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 148 FPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 148 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
.+..+...|+.+|...+.+++.++.+. .++++.+++|+.+..+
T Consensus 164 ~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~ 208 (267)
T 1vl8_A 164 VTMPNISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTK 208 (267)
T ss_dssp CCSSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCST
T ss_pred cCCCCChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCccc
Confidence 122345689999999999999887763 2899999999998765
|
| >1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.89 E-value=1.1e-22 Score=178.69 Aligned_cols=176 Identities=16% Similarity=0.131 Sum_probs=136.8
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
+++|++|||||+|+||++++++|+++|++|++++|+........+.+..... ...++.++.+|++|+++++++++.
T Consensus 4 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~~Dv~~~~~v~~~~~~~~ 81 (280)
T 1xkq_A 4 FSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGV--SEKQVNSVVADVTTEDGQDQIINSTL 81 (280)
T ss_dssp TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTC--CGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCC--CCcceEEEEecCCCHHHHHHHHHHHH
Confidence 5678999999999999999999999999999999976544443333332110 012688999999999999888774
Q ss_pred ---CCCCEEEEcccccch--------hhhhcChHHHHHHhHHHHHHHHHHHHH----cCCCEEEEeccccccCCCCCCCc
Q 019795 80 ---QKFEAVIHFGALKAV--------AESVQHPFRYFDNNLIGTINLYQAMAK----YNCKKLVFSSSATIYGQPEKIPC 144 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~~--------~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~v~~Ss~~vyg~~~~~~~ 144 (335)
.++|+|||+||.... ..+.++++..+++|+.++.++++++.. .+ ++||++||...+...
T Consensus 82 ~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~----- 155 (280)
T 1xkq_A 82 KQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK-GEIVNVSSIVAGPQA----- 155 (280)
T ss_dssp HHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGSSSC-----
T ss_pred HhcCCCCEEEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCC-CcEEEecCccccCCC-----
Confidence 379999999997422 223456778999999999999998754 34 799999998765311
Q ss_pred cCCCCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 145 VEDFPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 145 ~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
..+...|+.+|...+.+++.++.+. .++++.+++|+.++++
T Consensus 156 -----~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~ 198 (280)
T 1xkq_A 156 -----QPDFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETG 198 (280)
T ss_dssp -----CCSSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSS
T ss_pred -----CCcccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEeeCcCcCC
Confidence 1345689999999999999887652 3899999999999886
|
| >3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.89 E-value=3.6e-22 Score=177.20 Aligned_cols=173 Identities=19% Similarity=0.192 Sum_probs=138.0
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
+++|+||||||+|+||++++++|+++|++|++++|+........+.+... ...+.++.+|++|.+++.++++.
T Consensus 29 l~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~-----~~~~~~~~~Dv~d~~~v~~~~~~~~ 103 (301)
T 3tjr_A 29 FDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQ-----GFDAHGVVCDVRHLDEMVRLADEAF 103 (301)
T ss_dssp STTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-----TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc-----CCceEEEEccCCCHHHHHHHHHHHH
Confidence 35689999999999999999999999999999999766555555544432 25788999999999999888874
Q ss_pred ---CCCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHHHH----cC-CCEEEEeccccccCCCCCCCccCC
Q 019795 80 ---QKFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAMAK----YN-CKKLVFSSSATIYGQPEKIPCVED 147 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~-~~~~v~~Ss~~vyg~~~~~~~~e~ 147 (335)
.++|+|||+||.... ..+.++++..+++|+.++.++++++.. .+ .++||++||...+.
T Consensus 104 ~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~---------- 173 (301)
T 3tjr_A 104 RLLGGVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLV---------- 173 (301)
T ss_dssp HHHSSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTS----------
T ss_pred HhCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcC----------
Confidence 379999999997432 234566778999999999999998643 33 46899999977652
Q ss_pred CCCCCCChhHHhHHHHHHHHHHHHhhCC--CCeEEEEecccccCC
Q 019795 148 FPYGAMNPYGRTKQWCEEIAFDVQKADP--EWRIILLRYFNPVGA 190 (335)
Q Consensus 148 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~~--~~~~~~lR~~~v~G~ 190 (335)
+..+...|+.||...+.+++.++.+.. ++++.+++|+.|..+
T Consensus 174 -~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~ 217 (301)
T 3tjr_A 174 -PNAGLGTYGVAKYGVVGLAETLAREVKPNGIGVSVLCPMVVETK 217 (301)
T ss_dssp -CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEECCSCCCSS
T ss_pred -CCCCchHHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCccccc
Confidence 334456899999999999998877642 789999999988665
|
| >1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.89 E-value=2.1e-22 Score=178.99 Aligned_cols=177 Identities=18% Similarity=0.137 Sum_probs=137.7
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
+++|+||||||+|+||++++++|+++|++|++++|+........+.+..........++.++.+|++|++++.++++.
T Consensus 16 l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~ 95 (303)
T 1yxm_A 16 LQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTL 95 (303)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHHHH
Confidence 456899999999999999999999999999999997554444444443311111125789999999999999988874
Q ss_pred ---CCCCEEEEcccccc----hhhhhcChHHHHHHhHHHHHHHHHHHHH----cCCCEEEEeccccccCCCCCCCccCCC
Q 019795 80 ---QKFEAVIHFGALKA----VAESVQHPFRYFDNNLIGTINLYQAMAK----YNCKKLVFSSSATIYGQPEKIPCVEDF 148 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~----~~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~v~~Ss~~vyg~~~~~~~~e~~ 148 (335)
.++|+|||+||... ...+.++++..+++|+.++.++++++.. .+.+++|++||...+
T Consensus 96 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~------------ 163 (303)
T 1yxm_A 96 DTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTKA------------ 163 (303)
T ss_dssp HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCCTT------------
T ss_pred HHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCeEEEEEeeccc------------
Confidence 36999999999632 1223456678899999999999999765 234689999997632
Q ss_pred CCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 149 PYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 149 ~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
+..+...|+.+|...+.+.+.++.+. .+++++++||+.++|+
T Consensus 164 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~ 207 (303)
T 1yxm_A 164 GFPLAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQ 207 (303)
T ss_dssp CCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCT
T ss_pred CCCcchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCcccc
Confidence 22334579999999999999888774 2799999999999997
|
| >3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=99.89 E-value=1.4e-22 Score=175.99 Aligned_cols=174 Identities=18% Similarity=0.143 Sum_probs=134.2
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCC-CchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc-
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHN-SVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~- 79 (335)
+++|++|||||+|+||++++++|+++|++|++++++.. ......+.+.+. ...+.++.+|++|+++++++++.
T Consensus 6 l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~ 80 (259)
T 3edm_A 6 FTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKL-----GRSALAIKADLTNAAEVEAAISAA 80 (259)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTT-----TSCCEEEECCTTCHHHHHHHHHHH
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc-----CCceEEEEcCCCCHHHHHHHHHHH
Confidence 45789999999999999999999999999999855433 223333333321 25788999999999999988875
Q ss_pred ----CCCCEEEEcccccc-----hhhhhcChHHHHHHhHHHHHHHHHHHHHcC--CCEEEEeccccccCCCCCCCccCCC
Q 019795 80 ----QKFEAVIHFGALKA-----VAESVQHPFRYFDNNLIGTINLYQAMAKYN--CKKLVFSSSATIYGQPEKIPCVEDF 148 (335)
Q Consensus 80 ----~~~d~vi~~a~~~~-----~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~--~~~~v~~Ss~~vyg~~~~~~~~e~~ 148 (335)
.++|++||+||... ...+.++++..+++|+.++.++++++...- .++||++||...+..
T Consensus 81 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~---------- 150 (259)
T 3edm_A 81 ADKFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTFSSQAGRDG---------- 150 (259)
T ss_dssp HHHHCSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHC----------
T ss_pred HHHhCCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEcCHHhccC----------
Confidence 37999999998641 122445667899999999999999987652 248999999776511
Q ss_pred CCCCCChhHHhHHHHHHHHHHHHhhC-CCCeEEEEecccccCC
Q 019795 149 PYGAMNPYGRTKQWCEEIAFDVQKAD-PEWRIILLRYFNPVGA 190 (335)
Q Consensus 149 ~~~~~~~Y~~sK~~~E~~~~~~~~~~-~~~~~~~lR~~~v~G~ 190 (335)
+..+...|+.||...+.+++.++.++ +.+++.++.|+.|..+
T Consensus 151 ~~~~~~~Y~asKaa~~~l~~~la~e~~~~I~vn~v~PG~v~T~ 193 (259)
T 3edm_A 151 GGPGALAYATSKGAVMTFTRGLAKEVGPKIRVNAVCPGMISTT 193 (259)
T ss_dssp CSTTCHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCC-
T ss_pred CCCCcHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCcCc
Confidence 22345689999999999999988874 3589999999988765
|
| >3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=1.8e-22 Score=172.72 Aligned_cols=173 Identities=16% Similarity=0.142 Sum_probs=136.0
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc---
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS--- 79 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~--- 79 (335)
+||++|||||+|+||++++++|+++|++|++++|+........+.+.+..+ ..+.++.+|++|++++.+++++
T Consensus 1 ~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~----~~~~~~~~D~~~~~~v~~~~~~~~~ 76 (235)
T 3l77_A 1 EMKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQG----VEVFYHHLDVSKAESVEEFSKKVLE 76 (235)
T ss_dssp CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHC----CCEEEEECCTTCHHHHHHHCC-HHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcC----CeEEEEEeccCCHHHHHHHHHHHHH
Confidence 478999999999999999999999999999999976655555554442222 5789999999999999998875
Q ss_pred --CCCCEEEEcccccchh----hhhcChHHHHHHhHHHHHHHHHHHHHc---CCCEEEEeccccccCCCCCCCccCCCCC
Q 019795 80 --QKFEAVIHFGALKAVA----ESVQHPFRYFDNNLIGTINLYQAMAKY---NCKKLVFSSSATIYGQPEKIPCVEDFPY 150 (335)
Q Consensus 80 --~~~d~vi~~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~~v~~Ss~~vyg~~~~~~~~e~~~~ 150 (335)
.++|++||+||..... .+.++++..+++|+.++.++++++... +.+++|++||...+. +.
T Consensus 77 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~ii~~sS~~~~~-----------~~ 145 (235)
T 3l77_A 77 RFGDVDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKRTGGLALVTTSDVSAR-----------LI 145 (235)
T ss_dssp HHSSCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSS-----------CC
T ss_pred hcCCCCEEEECCccccccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEEecchhcc-----------cC
Confidence 3799999999975332 245677789999999999999997542 235777777755431 22
Q ss_pred CCCChhHHhHHHHHHHHHHHHhhCCCCeEEEEecccccCC
Q 019795 151 GAMNPYGRTKQWCEEIAFDVQKADPEWRIILLRYFNPVGA 190 (335)
Q Consensus 151 ~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~lR~~~v~G~ 190 (335)
.....|+.+|...+.+++.+..+.+++++.+++|+.+-.+
T Consensus 146 ~~~~~Y~~sKaa~~~~~~~l~~~~~~i~v~~v~PG~v~T~ 185 (235)
T 3l77_A 146 PYGGGYVSTKWAARALVRTFQIENPDVRFFELRPGAVDTY 185 (235)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEECSBSSS
T ss_pred CCcchHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCccccc
Confidence 2335799999999999998876666999999999988654
|
| >1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.89 E-value=2.2e-22 Score=173.51 Aligned_cols=177 Identities=12% Similarity=0.020 Sum_probs=135.1
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCC--CeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGG--FKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~ 79 (335)
|++|+||||||+|+||+++++.|+++| ++|++++|+....... .+.. ..++.++.+|++|++++.++++.
T Consensus 1 m~~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l----~~~~----~~~~~~~~~D~~~~~~~~~~~~~ 72 (250)
T 1yo6_A 1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATEL----KSIK----DSRVHVLPLTVTCDKSLDTFVSK 72 (250)
T ss_dssp CCCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHH----HTCC----CTTEEEEECCTTCHHHHHHHHHH
T ss_pred CCCCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHH----Hhcc----CCceEEEEeecCCHHHHHHHHHH
Confidence 468899999999999999999999999 9999999976544322 2211 25789999999999999888874
Q ss_pred C-------CCCEEEEcccccc-----hhhhhcChHHHHHHhHHHHHHHHHHHHHc----------C-----CCEEEEecc
Q 019795 80 Q-------KFEAVIHFGALKA-----VAESVQHPFRYFDNNLIGTINLYQAMAKY----------N-----CKKLVFSSS 132 (335)
Q Consensus 80 ~-------~~d~vi~~a~~~~-----~~~~~~~~~~~~~~nv~~~~~l~~~~~~~----------~-----~~~~v~~Ss 132 (335)
. ++|+|||+||... ...+.++++..+++|+.++.++++++... + .++||++||
T Consensus 73 ~~~~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS 152 (250)
T 1yo6_A 73 VGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISS 152 (250)
T ss_dssp HHHHHGGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECC
T ss_pred HHHhcCCCCCcEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEecc
Confidence 2 7999999999754 12234566789999999999999986532 4 579999999
Q ss_pred ccccCCCCCCCccCCCCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 133 ATIYGQPEKIPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 133 ~~vyg~~~~~~~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
...+.... .+..+..+...|+.+|...+.+++.++.++ .++++.++||+.|.++
T Consensus 153 ~~~~~~~~----~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~ 208 (250)
T 1yo6_A 153 GLGSITDN----TSGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTN 208 (250)
T ss_dssp GGGCSTTC----CSTTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC---
T ss_pred CccccCCc----ccccccCCccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEcCCceecC
Confidence 77653221 111222456689999999999999888775 2799999999998765
|
| >3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=1e-21 Score=173.96 Aligned_cols=172 Identities=13% Similarity=-0.004 Sum_probs=136.4
Q ss_pred CCCCeEEEEcCCC--hhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc
Q 019795 2 ASEKNILVTGGAG--FIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS 79 (335)
Q Consensus 2 ~~~~~vlItGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~ 79 (335)
+++|++|||||+| +||+++++.|+++|++|++++|+.... +....+.... ..+.++.+|++|+++++++++.
T Consensus 28 l~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~-~~~~~~~~~~-----~~~~~~~~Dv~d~~~v~~~~~~ 101 (296)
T 3k31_A 28 MEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFK-KRVDPLAESL-----GVKLTVPCDVSDAESVDNMFKV 101 (296)
T ss_dssp TTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGH-HHHHHHHHHH-----TCCEEEECCTTCHHHHHHHHHH
T ss_pred cCCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHH-HHHHHHHHhc-----CCeEEEEcCCCCHHHHHHHHHH
Confidence 4568999999997 999999999999999999999975332 2222222221 3468899999999999988875
Q ss_pred -----CCCCEEEEcccccch--------hhhhcChHHHHHHhHHHHHHHHHHHHHcC--CCEEEEeccccccCCCCCCCc
Q 019795 80 -----QKFEAVIHFGALKAV--------AESVQHPFRYFDNNLIGTINLYQAMAKYN--CKKLVFSSSATIYGQPEKIPC 144 (335)
Q Consensus 80 -----~~~d~vi~~a~~~~~--------~~~~~~~~~~~~~nv~~~~~l~~~~~~~~--~~~~v~~Ss~~vyg~~~~~~~ 144 (335)
.++|++||+||.... ..+.++++..+++|+.++.++++++...- ..+||++||...+.
T Consensus 102 ~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS~~~~~------- 174 (296)
T 3k31_A 102 LAEEWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSYYGAEK------- 174 (296)
T ss_dssp HHHHHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTS-------
T ss_pred HHHHcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEehhhcc-------
Confidence 389999999997532 23456777899999999999999987642 35899999977652
Q ss_pred cCCCCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 145 VEDFPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 145 ~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
+......|+.||...+.+++.++.++ .++++.+++|+.|..+
T Consensus 175 ----~~~~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~v~PG~v~T~ 218 (296)
T 3k31_A 175 ----VVPHYNVMGVCKAALEASVKYLAVDLGKQQIRVNAISAGPVRTL 218 (296)
T ss_dssp ----CCTTTTHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCCCCS
T ss_pred ----CCCCchhhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEECCCcCc
Confidence 33445689999999999999888773 2799999999999876
|
| >3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=5.5e-22 Score=174.83 Aligned_cols=177 Identities=18% Similarity=0.149 Sum_probs=135.8
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCc------------hhhHHhhhhhcCCccccceeEEEccCCC
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSV------------PEAVDRVKDLAGPELAKKLEFHVGDLRN 69 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~------------~~~~~~~~~~~~~~~~~~i~~~~~Dl~d 69 (335)
+++|++|||||+|+||+++++.|+++|++|++++|++... .+..+.+.+... ....++.++.+|++|
T Consensus 9 l~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dv~~ 87 (286)
T 3uve_A 9 VEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVK-GHNRRIVTAEVDVRD 87 (286)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHH-TTTCCEEEEECCTTC
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHh-hcCCceEEEEcCCCC
Confidence 3578999999999999999999999999999999873221 122222211110 112578999999999
Q ss_pred HHHHHHHHhc-----CCCCEEEEcccccch-----hhhhcChHHHHHHhHHHHHHHHHHHHHc----C-CCEEEEecccc
Q 019795 70 KDDLDKLFSS-----QKFEAVIHFGALKAV-----AESVQHPFRYFDNNLIGTINLYQAMAKY----N-CKKLVFSSSAT 134 (335)
Q Consensus 70 ~~~~~~~~~~-----~~~d~vi~~a~~~~~-----~~~~~~~~~~~~~nv~~~~~l~~~~~~~----~-~~~~v~~Ss~~ 134 (335)
+++++++++. .++|++||+||.... ..+.++++..+++|+.++.++++++... + ..+||++||..
T Consensus 88 ~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~ 167 (286)
T 3uve_A 88 YDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSVG 167 (286)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGG
T ss_pred HHHHHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCcEEEEECchh
Confidence 9999988874 389999999997432 2245677789999999999999986542 3 45899999977
Q ss_pred ccCCCCCCCccCCCCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 135 IYGQPEKIPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 135 vyg~~~~~~~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
.+. +......|+.||...+.+++.++.++ .++++.+++|+.|..+
T Consensus 168 ~~~-----------~~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~ 214 (286)
T 3uve_A 168 GLK-----------AYPHTGHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTP 214 (286)
T ss_dssp GTS-----------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSST
T ss_pred hcc-----------CCCCccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCC
Confidence 652 33445689999999999999888773 2799999999999876
|
| >3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} | Back alignment and structure |
|---|
Probab=99.89 E-value=1.8e-22 Score=174.66 Aligned_cols=173 Identities=13% Similarity=0.122 Sum_probs=135.3
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
+++|++|||||+|+||+++++.|+++|++|++++|+........+.+... ..++.++.+|++|++++.++++.
T Consensus 5 ~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~ 79 (252)
T 3h7a_A 5 PRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAA-----GGRIVARSLDARNEDEVTAFLNAAD 79 (252)
T ss_dssp CCSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHT-----TCEEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-----CCeEEEEECcCCCHHHHHHHHHHHH
Confidence 45789999999999999999999999999999999877766666665543 25789999999999999988875
Q ss_pred --CCCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHHH----HcCCCEEEEeccccccCCCCCCCccCCCC
Q 019795 80 --QKFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAMA----KYNCKKLVFSSSATIYGQPEKIPCVEDFP 149 (335)
Q Consensus 80 --~~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~ 149 (335)
.++|++||+||.... ..+.++++..+++|+.++.++++++. +.+.++||++||...+. +
T Consensus 80 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~ 148 (252)
T 3h7a_A 80 AHAPLEVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHGQGKIFFTGATASLR-----------G 148 (252)
T ss_dssp HHSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTC-----------C
T ss_pred hhCCceEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHHcC-----------C
Confidence 378999999997432 33456677899999999999999864 34557999999976542 2
Q ss_pred CCCCChhHHhHHHHHHHHHHHHhhCC--CCeE-EEEecccccCC
Q 019795 150 YGAMNPYGRTKQWCEEIAFDVQKADP--EWRI-ILLRYFNPVGA 190 (335)
Q Consensus 150 ~~~~~~Y~~sK~~~E~~~~~~~~~~~--~~~~-~~lR~~~v~G~ 190 (335)
......|+.||...+.+++.++.++. ++++ .++.|+.|..+
T Consensus 149 ~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~v~n~v~PG~v~T~ 192 (252)
T 3h7a_A 149 GSGFAAFASAKFGLRAVAQSMARELMPKNIHVAHLIIDSGVDTA 192 (252)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC------
T ss_pred CCCCccHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCCccCCh
Confidence 33456899999999999998887742 6788 78999887554
|
| >2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.89 E-value=1.3e-22 Score=174.89 Aligned_cols=169 Identities=15% Similarity=0.091 Sum_probs=132.9
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc-C
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-Q 80 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-~ 80 (335)
+++|++|||||+|+||++++++|+++|++|++++|+...... +.+. .++.++.+|++|+++++++++. .
T Consensus 4 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~----~~~~------~~~~~~~~D~~~~~~~~~~~~~~~ 73 (246)
T 2ag5_A 4 LDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQE----LEKY------PGIQTRVLDVTKKKQIDQFANEVE 73 (246)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGG----GGGS------TTEEEEECCTTCHHHHHHHHHHCS
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHH----HHhc------cCceEEEeeCCCHHHHHHHHHHhC
Confidence 467899999999999999999999999999999986432221 1111 2678899999999999887764 3
Q ss_pred CCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHHH----HcCCCEEEEeccccccCCCCCCCccCCCCCCC
Q 019795 81 KFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAMA----KYNCKKLVFSSSATIYGQPEKIPCVEDFPYGA 152 (335)
Q Consensus 81 ~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~ 152 (335)
++|+|||+||.... ..+.++++..+++|+.++.++++++. +.+.++||++||...+... ..+
T Consensus 74 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~~~ 143 (246)
T 2ag5_A 74 RLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKG----------VVN 143 (246)
T ss_dssp CCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBC----------CTT
T ss_pred CCCEEEECCccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechHhCcCC----------CCC
Confidence 79999999997432 22345677889999999999999865 3456799999997654211 114
Q ss_pred CChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 153 MNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 153 ~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
...|+.+|...+.+++.++.+. .++++.++||+.++++
T Consensus 144 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~ 183 (246)
T 2ag5_A 144 RCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTP 183 (246)
T ss_dssp BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECH
T ss_pred CccHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCcCcCc
Confidence 4689999999999999887663 2899999999999886
|
| >3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=1.3e-21 Score=171.97 Aligned_cols=171 Identities=13% Similarity=0.029 Sum_probs=136.9
Q ss_pred CCCCeEEEEcCCCh--hhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc
Q 019795 2 ASEKNILVTGGAGF--IGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS 79 (335)
Q Consensus 2 ~~~~~vlItGatG~--iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~ 79 (335)
+++|+||||||+|+ ||+++++.|+++|++|++++|+. ..+..+.+.+.. ..+.++.+|++|.++++++++.
T Consensus 24 l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~--~~~~~~~l~~~~-----~~~~~~~~Dl~~~~~v~~~~~~ 96 (280)
T 3nrc_A 24 LAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQ--FKDRVEKLCAEF-----NPAAVLPCDVISDQEIKDLFVE 96 (280)
T ss_dssp TTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTT--CHHHHHHHHGGG-----CCSEEEECCTTCHHHHHHHHHH
T ss_pred cCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCch--HHHHHHHHHHhc-----CCceEEEeecCCHHHHHHHHHH
Confidence 45789999999966 99999999999999999999976 334444443322 3588999999999999988875
Q ss_pred -----CCCCEEEEcccccchh---------hhhcChHHHHHHhHHHHHHHHHHHHHc---CCCEEEEeccccccCCCCCC
Q 019795 80 -----QKFEAVIHFGALKAVA---------ESVQHPFRYFDNNLIGTINLYQAMAKY---NCKKLVFSSSATIYGQPEKI 142 (335)
Q Consensus 80 -----~~~d~vi~~a~~~~~~---------~~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~~v~~Ss~~vyg~~~~~ 142 (335)
.++|+|||+||..... .+.+.++..+++|+.++.++++++... +..+||++||...+.
T Consensus 97 ~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~----- 171 (280)
T 3nrc_A 97 LGKVWDGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNRNASMVALTYIGAEK----- 171 (280)
T ss_dssp HHHHCSSCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECGGGTS-----
T ss_pred HHHHcCCCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEecccccc-----
Confidence 3799999999975321 345567789999999999999997653 346999999977652
Q ss_pred CccCCCCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 143 PCVEDFPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 143 ~~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
+..+...|+.+|.+.+.+++.++.+. .++++.+++|+.|..+
T Consensus 172 ------~~~~~~~Y~asKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~ 215 (280)
T 3nrc_A 172 ------AMPSYNTMGVAKASLEATVRYTALALGEDGIKVNAVSAGPIKTL 215 (280)
T ss_dssp ------CCTTTHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCS
T ss_pred ------CCCCchhhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeccccch
Confidence 33455689999999999999888763 2799999999999876
|
| >2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} | Back alignment and structure |
|---|
Probab=99.89 E-value=1.3e-22 Score=176.48 Aligned_cols=176 Identities=15% Similarity=0.158 Sum_probs=136.4
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
+++|++|||||+|+||+++++.|+++|++|++++|+........+.+..... ..++.++.+|++|+++++++++.
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~ 81 (260)
T 2z1n_A 5 IQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVS---GAQVDIVAGDIREPGDIDRLFEKAR 81 (260)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHST---TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC---CCeEEEEEccCCCHHHHHHHHHHHH
Confidence 4578999999999999999999999999999999975444433333322100 12688999999999998888873
Q ss_pred --CCCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHHH----HcCCCEEEEeccccccCCCCCCCccCCCC
Q 019795 80 --QKFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAMA----KYNCKKLVFSSSATIYGQPEKIPCVEDFP 149 (335)
Q Consensus 80 --~~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~ 149 (335)
.++|+|||+||.... ..+.++++..+++|+.++.++++++. +.+.++||++||...+. +
T Consensus 82 ~~~gid~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~ 150 (260)
T 2z1n_A 82 DLGGADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKGWGRMVYIGSVTLLR-----------P 150 (260)
T ss_dssp HTTCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS-----------C
T ss_pred HhcCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhcC-----------C
Confidence 249999999996422 22445677899999999988888754 44667999999987763 2
Q ss_pred CCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCCC
Q 019795 150 YGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGAH 191 (335)
Q Consensus 150 ~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~~ 191 (335)
..+...|+.+|...+.+++.++.++ .++++.+++|+.++++.
T Consensus 151 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 194 (260)
T 2z1n_A 151 WQDLALSNIMRLPVIGVVRTLALELAPHGVTVNAVLPSLILTDR 194 (260)
T ss_dssp CTTBHHHHHHTHHHHHHHHHHHHHHGGGTEEEEEEEECHHHHCC
T ss_pred CCCCchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEEECCcccch
Confidence 2345689999999999999887663 27999999999998873
|
| >3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.89 E-value=2.2e-22 Score=180.18 Aligned_cols=178 Identities=18% Similarity=0.148 Sum_probs=134.0
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCC-CchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc-
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHN-SVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~- 79 (335)
|++|++|||||+|+||++++++|+++|++|++++|+.. ......+.+.+... .....+.++.+|++|++++.++++.
T Consensus 3 m~~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~-~~~~~~~~~~~Dvtd~~~v~~~~~~~ 81 (324)
T 3u9l_A 3 MSKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFAR-DNDVDLRTLELDVQSQVSVDRAIDQI 81 (324)
T ss_dssp --CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHH-HHTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHH-hcCCcEEEEEeecCCHHHHHHHHHHH
Confidence 45689999999999999999999999999999998642 22222222222110 0125789999999999999988875
Q ss_pred ----CCCCEEEEcccccc----hhhhhcChHHHHHHhHHHHHHHHHHH----HHcCCCEEEEeccccccCCCCCCCccCC
Q 019795 80 ----QKFEAVIHFGALKA----VAESVQHPFRYFDNNLIGTINLYQAM----AKYNCKKLVFSSSATIYGQPEKIPCVED 147 (335)
Q Consensus 80 ----~~~d~vi~~a~~~~----~~~~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~v~~Ss~~vyg~~~~~~~~e~ 147 (335)
.++|+||||||... ...+.++++.++++|+.|+.++++++ ++.+.+++|++||...++.
T Consensus 82 ~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~~g~iV~isS~~~~~~--------- 152 (324)
T 3u9l_A 82 IGEDGRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQKHGLLIWISSSSSAGG--------- 152 (324)
T ss_dssp HHHHSCCSEEEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC---------
T ss_pred HHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEecchhccC---------
Confidence 38999999999742 22245567789999999999999997 5556789999999776521
Q ss_pred CCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 148 FPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 148 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
+......|+.||...|.+++.++.+. .++++++++|+.|.++
T Consensus 153 -~~~~~~~Y~asKaa~~~~~~~la~el~~~gI~v~~v~PG~v~t~ 196 (324)
T 3u9l_A 153 -TPPYLAPYFAAKAAMDAIAVQYARELSRWGIETSIIVPGAFTSG 196 (324)
T ss_dssp -CCSSCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCC---
T ss_pred -CCCcchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEECCccccC
Confidence 12224579999999999999888772 2899999999999765
|
| >2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=99.89 E-value=3.9e-22 Score=175.75 Aligned_cols=173 Identities=15% Similarity=0.003 Sum_probs=136.3
Q ss_pred CCCCeEEEEcCC--ChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc
Q 019795 2 ASEKNILVTGGA--GFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS 79 (335)
Q Consensus 2 ~~~~~vlItGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~ 79 (335)
+++|+||||||+ |+||+++++.|+++|++|++++|+.. .....+.+.+.. ..+.++.+|++|++++.++++.
T Consensus 19 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~-----~~~~~~~~Dl~~~~~v~~~~~~ 92 (285)
T 2p91_A 19 LEGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPK-LEKRVREIAKGF-----GSDLVVKCDVSLDEDIKNLKKF 92 (285)
T ss_dssp TTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGG-GHHHHHHHHHHT-----TCCCEEECCTTCHHHHHHHHHH
T ss_pred cCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHHHHhc-----CCeEEEEcCCCCHHHHHHHHHH
Confidence 456899999999 99999999999999999999999753 333333333221 2367899999999999888874
Q ss_pred -----CCCCEEEEcccccch--------hhhhcChHHHHHHhHHHHHHHHHHHHHcC---CCEEEEeccccccCCCCCCC
Q 019795 80 -----QKFEAVIHFGALKAV--------AESVQHPFRYFDNNLIGTINLYQAMAKYN---CKKLVFSSSATIYGQPEKIP 143 (335)
Q Consensus 80 -----~~~d~vi~~a~~~~~--------~~~~~~~~~~~~~nv~~~~~l~~~~~~~~---~~~~v~~Ss~~vyg~~~~~~ 143 (335)
.++|+|||+||.... ..+.++++..+++|+.++.++++++...- .++||++||...+.
T Consensus 93 ~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~------ 166 (285)
T 2p91_A 93 LEENWGSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGRNGAIVTLSYYGAEK------ 166 (285)
T ss_dssp HHHHTSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTSCCEEEEEECGGGTS------
T ss_pred HHHHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCEEEEEccchhcc------
Confidence 379999999997532 23445677899999999999999987642 36999999976542
Q ss_pred ccCCCCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCCC
Q 019795 144 CVEDFPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGAH 191 (335)
Q Consensus 144 ~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~~ 191 (335)
+..+...|+.||...+.+++.++.+. .++++.+++|+.|+++.
T Consensus 167 -----~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~ 211 (285)
T 2p91_A 167 -----VVPHYNVMGIAKAALESTVRYLAYDIAKHGHRINAISAGPVKTLA 211 (285)
T ss_dssp -----BCTTTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCSC
T ss_pred -----CCCCccHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCcccCch
Confidence 22345689999999999999887663 38999999999998873
|
| >3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=3.1e-22 Score=172.73 Aligned_cols=166 Identities=21% Similarity=0.281 Sum_probs=133.0
Q ss_pred CeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcC----
Q 019795 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQ---- 80 (335)
Q Consensus 5 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~---- 80 (335)
|++|||||+|+||+++++.|+++|++|++++|+........+.+ + .++.++.+|++|+++++++++..
T Consensus 1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~----~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 72 (248)
T 3asu_A 1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDEL----G----DNLYIAQLDVRNRAAIEEMLASLPAEW 72 (248)
T ss_dssp CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH----C----TTEEEEECCTTCHHHHHHHHHTSCTTT
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----c----CceEEEEcCCCCHHHHHHHHHHHHHhC
Confidence 68999999999999999999999999999999654333222222 1 46889999999999999998752
Q ss_pred -CCCEEEEcccccc-----hhhhhcChHHHHHHhHHHHHHHHHHHH----HcCCCEEEEeccccccCCCCCCCccCCCCC
Q 019795 81 -KFEAVIHFGALKA-----VAESVQHPFRYFDNNLIGTINLYQAMA----KYNCKKLVFSSSATIYGQPEKIPCVEDFPY 150 (335)
Q Consensus 81 -~~d~vi~~a~~~~-----~~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~ 150 (335)
++|++||+||... ...+.++++..+++|+.++.++++++. +.+.++||++||...+. +.
T Consensus 73 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~-----------~~ 141 (248)
T 3asu_A 73 CNIDILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSW-----------PY 141 (248)
T ss_dssp CCCCEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTS-----------CC
T ss_pred CCCCEEEECCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEccchhcc-----------CC
Confidence 7999999999742 223455677899999999999999865 34567999999977652 23
Q ss_pred CCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccC
Q 019795 151 GAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVG 189 (335)
Q Consensus 151 ~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G 189 (335)
.+...|+.||...+.+++.++.+. .++++.+++|+.|.|
T Consensus 142 ~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~g 182 (248)
T 3asu_A 142 AGGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGG 182 (248)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECSBCC
T ss_pred CCCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecccccc
Confidence 345689999999999999988774 279999999999985
|
| >3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.89 E-value=1.4e-22 Score=173.45 Aligned_cols=170 Identities=18% Similarity=0.147 Sum_probs=133.0
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
|++|++|||||+|+||++++++|+++|++|++++|+........+.+. .++.++.+|++|+++++++++.
T Consensus 1 Ms~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~--------~~~~~~~~D~~~~~~v~~~~~~~~ 72 (235)
T 3l6e_A 1 MSLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLG--------NAVIGIVADLAHHEDVDVAFAAAV 72 (235)
T ss_dssp --CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG--------GGEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc--------CCceEEECCCCCHHHHHHHHHHHH
Confidence 468999999999999999999999999999999997554433333321 3688999999999999888875
Q ss_pred ---CCCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHHHHc---CCCEEEEeccccccCCCCCCCccCCCC
Q 019795 80 ---QKFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAMAKY---NCKKLVFSSSATIYGQPEKIPCVEDFP 149 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~~v~~Ss~~vyg~~~~~~~~e~~~ 149 (335)
.++|++||+||.... ..+.++++..+++|+.++.++++++... ...++|++||...+. +
T Consensus 73 ~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~-----------~ 141 (235)
T 3l6e_A 73 EWGGLPELVLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERGGVLANVLSSAAQV-----------G 141 (235)
T ss_dssp HHHCSCSEEEEECCCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCEECCS-----------S
T ss_pred HhcCCCcEEEECCCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHHhcC-----------C
Confidence 379999999998432 2245677789999999999999987543 123899999976542 2
Q ss_pred CCCCChhHHhHHHHHHHHHHHHhhCC--CCeEEEEecccccCC
Q 019795 150 YGAMNPYGRTKQWCEEIAFDVQKADP--EWRIILLRYFNPVGA 190 (335)
Q Consensus 150 ~~~~~~Y~~sK~~~E~~~~~~~~~~~--~~~~~~lR~~~v~G~ 190 (335)
..+...|+.||...+.+++.++.+.. ++++.+++|+.|-.+
T Consensus 142 ~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~ 184 (235)
T 3l6e_A 142 KANESLYCASKWGMRGFLESLRAELKDSPLRLVNLYPSGIRSE 184 (235)
T ss_dssp CSSHHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEEEEECCC
T ss_pred CCCCcHHHHHHHHHHHHHHHHHHHhhccCCEEEEEeCCCccCc
Confidence 23345799999999999999988752 789999999988554
|
| >3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.89 E-value=1.5e-22 Score=176.49 Aligned_cols=174 Identities=17% Similarity=0.169 Sum_probs=132.5
Q ss_pred CCCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCC-chhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc
Q 019795 1 MASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNS-VPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS 79 (335)
Q Consensus 1 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~ 79 (335)
|+++|++|||||+|+||++++++|+++|++|++++++... .....+.+... ...+.++.+|++|+++++++++.
T Consensus 24 ~~~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~Dl~~~~~v~~~~~~ 98 (267)
T 3u5t_A 24 METNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAA-----GGKALTAQADVSDPAAVRRLFAT 98 (267)
T ss_dssp ---CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHT-----TCCEEEEECCTTCHHHHHHHHHH
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc-----CCeEEEEEcCCCCHHHHHHHHHH
Confidence 3467899999999999999999999999999988654432 22233333221 25788999999999999988875
Q ss_pred -----CCCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHHHHc--CCCEEEEeccccccCCCCCCCccCCC
Q 019795 80 -----QKFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAMAKY--NCKKLVFSSSATIYGQPEKIPCVEDF 148 (335)
Q Consensus 80 -----~~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~ 148 (335)
.++|++||+||.... ..+.+.++..+++|+.++.++++++... ..++||++||...+.
T Consensus 99 ~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~----------- 167 (267)
T 3u5t_A 99 AEEAFGGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMSTSQVGL----------- 167 (267)
T ss_dssp HHHHHSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCTHHHH-----------
T ss_pred HHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeChhhcc-----------
Confidence 389999999997432 2234567788999999999999998764 225899999976642
Q ss_pred CCCCCChhHHhHHHHHHHHHHHHhhCC--CCeEEEEecccccCC
Q 019795 149 PYGAMNPYGRTKQWCEEIAFDVQKADP--EWRIILLRYFNPVGA 190 (335)
Q Consensus 149 ~~~~~~~Y~~sK~~~E~~~~~~~~~~~--~~~~~~lR~~~v~G~ 190 (335)
+..+...|+.||...+.+++.++.++. ++++.+++|+.|..+
T Consensus 168 ~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~ 211 (267)
T 3u5t_A 168 LHPSYGIYAAAKAGVEAMTHVLSKELRGRDITVNAVAPGPTATD 211 (267)
T ss_dssp CCTTCHHHHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECCBC--
T ss_pred CCCCchHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEEECCCcCc
Confidence 223446899999999999999998853 789999999988665
|
| >4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=3.1e-22 Score=174.68 Aligned_cols=173 Identities=15% Similarity=0.056 Sum_probs=133.5
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCC-CCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc-
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLH-NSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~- 79 (335)
+++|+||||||+|+||++++++|+++|++|+++.+.. .......+.+... ..++.++.+|++|++++.++++.
T Consensus 24 l~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~-----~~~~~~~~~Dl~~~~~~~~~~~~~ 98 (267)
T 4iiu_A 24 AMSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVAN-----GGNGRLLSFDVANREQCREVLEHE 98 (267)
T ss_dssp -CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT-----TCCEEEEECCTTCHHHHHHHHHHH
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhc-----CCceEEEEecCCCHHHHHHHHHHH
Confidence 3568999999999999999999999999997765433 2333333333322 25789999999999999888874
Q ss_pred ----CCCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHHH-----HcCCCEEEEeccccccCCCCCCCccC
Q 019795 80 ----QKFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAMA-----KYNCKKLVFSSSATIYGQPEKIPCVE 146 (335)
Q Consensus 80 ----~~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~-----~~~~~~~v~~Ss~~vyg~~~~~~~~e 146 (335)
.++|+|||+||.... ..+.++++..+++|+.++.++++++. +.+..+||++||...+.
T Consensus 99 ~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~--------- 169 (267)
T 4iiu_A 99 IAQHGAWYGVVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQGGRIITLSSVSGVM--------- 169 (267)
T ss_dssp HHHHCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCHHHHH---------
T ss_pred HHHhCCccEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcchHhcc---------
Confidence 389999999997532 22456777899999999999999863 34557999999966542
Q ss_pred CCCCCCCChhHHhHHHHHHHHHHHHhhCC--CCeEEEEecccccCC
Q 019795 147 DFPYGAMNPYGRTKQWCEEIAFDVQKADP--EWRIILLRYFNPVGA 190 (335)
Q Consensus 147 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~--~~~~~~lR~~~v~G~ 190 (335)
+..+...|+.+|.+.+.+++.++.+.. ++++.+++|+.|..+
T Consensus 170 --~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~ 213 (267)
T 4iiu_A 170 --GNRGQVNYSAAKAGIIGATKALAIELAKRKITVNCIAPGLIDTG 213 (267)
T ss_dssp --CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCST
T ss_pred --CCCCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEEeeecCC
Confidence 233456899999999988888776642 789999999999876
|
| >2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=2.4e-22 Score=173.32 Aligned_cols=172 Identities=16% Similarity=0.144 Sum_probs=136.0
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
+++|++|||||+|+||+++++.|+++|++|++++|+........+.+... ..++.++.+|++|+++++++++.
T Consensus 5 l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~-----~~~~~~~~~Dv~~~~~~~~~~~~~~ 79 (247)
T 2jah_A 5 LQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAA-----GAKVHVLELDVADRQGVDAAVASTV 79 (247)
T ss_dssp TTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-----TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc-----CCcEEEEECCCCCHHHHHHHHHHHH
Confidence 56799999999999999999999999999999999755444444443321 14688999999999999888764
Q ss_pred ---CCCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHHHH----cCCCEEEEeccccccCCCCCCCccCCC
Q 019795 80 ---QKFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAMAK----YNCKKLVFSSSATIYGQPEKIPCVEDF 148 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~v~~Ss~~vyg~~~~~~~~e~~ 148 (335)
.++|++||+||.... ..+.++++..+++|+.++.++++++.. .+ ++||++||...+.
T Consensus 80 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~----------- 147 (247)
T 2jah_A 80 EALGGLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSK-GTVVQMSSIAGRV----------- 147 (247)
T ss_dssp HHHSCCSEEEECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTC-----------
T ss_pred HHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC-CEEEEEccHHhcC-----------
Confidence 379999999997422 224456778999999999999998653 35 7999999977652
Q ss_pred CCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 149 PYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 149 ~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
+..+...|+.+|...+.+++.++.+. .++++.+++|+.+..+
T Consensus 148 ~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~ 191 (247)
T 2jah_A 148 NVRNAAVYQATKFGVNAFSETLRQEVTERGVRVVVIEPGTTDTE 191 (247)
T ss_dssp CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSS
T ss_pred CCCCCcHHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCCCCCc
Confidence 23345689999999999998887663 2899999999998775
|
| >1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.89 E-value=1.2e-22 Score=174.13 Aligned_cols=163 Identities=15% Similarity=0.164 Sum_probs=131.9
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
|++|++|||||+|+||++++++|+++|++|++++|+..... ....++.+|++|++++.++++.
T Consensus 1 m~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~---------------~~~~~~~~D~~~~~~~~~~~~~~~ 65 (236)
T 1ooe_A 1 MSSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA---------------DSNILVDGNKNWTEQEQSILEQTA 65 (236)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS---------------SEEEECCTTSCHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCccccc---------------cccEEEeCCCCCHHHHHHHHHHHH
Confidence 46789999999999999999999999999999999765421 2346778999999988887763
Q ss_pred -----CCCCEEEEcccccc-----hhhhhcChHHHHHHhHHHHHHHHHHHHHc--CCCEEEEeccccccCCCCCCCccCC
Q 019795 80 -----QKFEAVIHFGALKA-----VAESVQHPFRYFDNNLIGTINLYQAMAKY--NCKKLVFSSSATIYGQPEKIPCVED 147 (335)
Q Consensus 80 -----~~~d~vi~~a~~~~-----~~~~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~ 147 (335)
.++|+|||+||... ...+.++++..+++|+.++.++++++... ..++||++||...+.
T Consensus 66 ~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~---------- 135 (236)
T 1ooe_A 66 SSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMG---------- 135 (236)
T ss_dssp HHHTTCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGS----------
T ss_pred HHhCCCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEECchhhcc----------
Confidence 48999999999643 22345667789999999999999998764 225899999987652
Q ss_pred CCCCCCChhHHhHHHHHHHHHHHHhhC----CCCeEEEEecccccCC
Q 019795 148 FPYGAMNPYGRTKQWCEEIAFDVQKAD----PEWRIILLRYFNPVGA 190 (335)
Q Consensus 148 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~----~~~~~~~lR~~~v~G~ 190 (335)
+..+...|+.+|...+.+++.++.+. .++++.+++|+.+.++
T Consensus 136 -~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~ 181 (236)
T 1ooe_A 136 -PTPSMIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTP 181 (236)
T ss_dssp -CCTTBHHHHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCH
T ss_pred -CCCCcHHHHHHHHHHHHHHHHHHHHhcccCCCeEEEEEecCcccCc
Confidence 23445689999999999999998775 2599999999988765
|
| >3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.89 E-value=5.6e-22 Score=174.01 Aligned_cols=177 Identities=18% Similarity=0.133 Sum_probs=134.9
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCC---------chhhHHhhhhhcCCccccceeEEEccCCCHHH
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNS---------VPEAVDRVKDLAGPELAKKLEFHVGDLRNKDD 72 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~---------~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~ 72 (335)
+++|++|||||+|+||+++++.|+++|++|++++|+... ..+..+...+... .....+.++.+|++|+++
T Consensus 9 l~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~ 87 (277)
T 3tsc_A 9 LEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVE-AANRRIVAAVVDTRDFDR 87 (277)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHH-HTTCCEEEEECCTTCHHH
T ss_pred cCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHH-hcCCeEEEEECCCCCHHH
Confidence 457899999999999999999999999999999984221 1111111111100 112578899999999999
Q ss_pred HHHHHhc-----CCCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHHHH----cC-CCEEEEeccccccCC
Q 019795 73 LDKLFSS-----QKFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAMAK----YN-CKKLVFSSSATIYGQ 138 (335)
Q Consensus 73 ~~~~~~~-----~~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~-~~~~v~~Ss~~vyg~ 138 (335)
++++++. .++|++||+||.... ..+.++++..+++|+.++.++++++.. .+ ..+||++||...+.
T Consensus 88 v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~- 166 (277)
T 3tsc_A 88 LRKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGMK- 166 (277)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTS-
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCEEEEEccHhhCC-
Confidence 9988875 479999999997532 234567788999999999999998543 33 46899999977652
Q ss_pred CCCCCccCCCCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 139 PEKIPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 139 ~~~~~~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
+......|+.||...+.+++.++.++ .++++.+++|+.|..+
T Consensus 167 ----------~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~ 210 (277)
T 3tsc_A 167 ----------MQPFMIHYTASKHAVTGLARAFAAELGKHSIRVNSVHPGPVNTP 210 (277)
T ss_dssp ----------CCSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSG
T ss_pred ----------CCCCchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeCCCcCC
Confidence 23345679999999999999888774 2799999999998776
|
| >3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.89 E-value=2e-22 Score=174.62 Aligned_cols=169 Identities=18% Similarity=0.195 Sum_probs=135.5
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCC--CeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc-
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGG--FKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS- 79 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~- 79 (335)
|+|++|||||+|+||++++++|+++| +.|++++|+........+.+ +.++.++.+|++|+++++++++.
T Consensus 1 Mgk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~--------~~~~~~~~~Dv~~~~~v~~~~~~~ 72 (254)
T 3kzv_A 1 MGKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKY--------GDRFFYVVGDITEDSVLKQLVNAA 72 (254)
T ss_dssp -CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHH--------GGGEEEEESCTTSHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHh--------CCceEEEECCCCCHHHHHHHHHHH
Confidence 46899999999999999999999985 78888888654333322222 15788999999999999988875
Q ss_pred ----CCCCEEEEcccccch-----hhhhcChHHHHHHhHHHHHHHHHHH----HHcCCCEEEEeccccccCCCCCCCccC
Q 019795 80 ----QKFEAVIHFGALKAV-----AESVQHPFRYFDNNLIGTINLYQAM----AKYNCKKLVFSSSATIYGQPEKIPCVE 146 (335)
Q Consensus 80 ----~~~d~vi~~a~~~~~-----~~~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~v~~Ss~~vyg~~~~~~~~e 146 (335)
.++|++||+||.... ..+.++++..+++|+.++.++++++ ++.+ +++|++||...+.
T Consensus 73 ~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-g~iv~isS~~~~~--------- 142 (254)
T 3kzv_A 73 VKGHGKIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTN-GNVVFVSSDACNM--------- 142 (254)
T ss_dssp HHHHSCCCEEEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCSCCCC---------
T ss_pred HHhcCCccEEEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CeEEEEcCchhcc---------
Confidence 389999999997422 2244667789999999999999987 4445 7999999977552
Q ss_pred CCCCCCCChhHHhHHHHHHHHHHHHhhCCCCeEEEEecccccCCC
Q 019795 147 DFPYGAMNPYGRTKQWCEEIAFDVQKADPEWRIILLRYFNPVGAH 191 (335)
Q Consensus 147 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~lR~~~v~G~~ 191 (335)
+..+...|+.||...+.+++.++.+.+++++.+++|+.+..+-
T Consensus 143 --~~~~~~~Y~asK~a~~~~~~~la~e~~~i~vn~v~PG~v~t~~ 185 (254)
T 3kzv_A 143 --YFSSWGAYGSSKAALNHFAMTLANEERQVKAIAVAPGIVDTDM 185 (254)
T ss_dssp --SSCCSHHHHHHHHHHHHHHHHHHHHCTTSEEEEEECSSCCCCC
T ss_pred --CCCCcchHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcccchh
Confidence 3345568999999999999999988879999999999998774
|
| >1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.89 E-value=3.1e-22 Score=175.80 Aligned_cols=177 Identities=21% Similarity=0.208 Sum_probs=134.3
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
+++|+||||||+|+||+++++.|+++|++|++++|+........+.+.... .+..+.++.+|++|++++.++++.
T Consensus 30 l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~~~Dl~~~~~v~~~~~~~~ 106 (279)
T 1xg5_A 30 WRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAG---YPGTLIPYRCDLSNEEDILSMFSAIR 106 (279)
T ss_dssp GTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT---CSSEEEEEECCTTCHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcC---CCceEEEEEecCCCHHHHHHHHHHHH
Confidence 457899999999999999999999999999999997554444333333221 114578899999999999888764
Q ss_pred ---CCCCEEEEcccccch----hhhhcChHHHHHHhHHHH----HHHHHHHHHcCC--CEEEEeccccccCCCCCCCccC
Q 019795 80 ---QKFEAVIHFGALKAV----AESVQHPFRYFDNNLIGT----INLYQAMAKYNC--KKLVFSSSATIYGQPEKIPCVE 146 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~----~~l~~~~~~~~~--~~~v~~Ss~~vyg~~~~~~~~e 146 (335)
.++|+|||+||.... ..+.++++..+++|+.++ ..++..+++.+. ++||++||...+..
T Consensus 107 ~~~g~iD~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~-------- 178 (279)
T 1xg5_A 107 SQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRV-------- 178 (279)
T ss_dssp HHHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSC--------
T ss_pred HhCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCceEEEEcChhhccc--------
Confidence 379999999997432 123456778999999995 445555666664 79999999876632
Q ss_pred CCCCCCCChhHHhHHHHHHHHHHHHhh----CCCCeEEEEecccccCC
Q 019795 147 DFPYGAMNPYGRTKQWCEEIAFDVQKA----DPEWRIILLRYFNPVGA 190 (335)
Q Consensus 147 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~----~~~~~~~~lR~~~v~G~ 190 (335)
.+..+...|+.+|...+.+++.++.+ ..++++.+++|+.|.++
T Consensus 179 -~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~ 225 (279)
T 1xg5_A 179 -LPLSVTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQ 225 (279)
T ss_dssp -CSCGGGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSS
T ss_pred -CCCCCCchhHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEecCcccch
Confidence 12334567999999999999887765 33799999999988765
|
| >2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.89 E-value=1.6e-22 Score=173.04 Aligned_cols=168 Identities=15% Similarity=0.131 Sum_probs=126.5
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc---
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS--- 79 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~--- 79 (335)
++|+||||||+|+||+++++.|+++|++|++++|+........+.+ .++.++.+|++|.+++.++++.
T Consensus 4 ~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---------~~~~~~~~D~~~~~~~~~~~~~~~~ 74 (234)
T 2ehd_A 4 MKGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAEL---------EGALPLPGDVREEGDWARAVAAMEE 74 (234)
T ss_dssp CCCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS---------TTCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---------hhceEEEecCCCHHHHHHHHHHHHH
Confidence 3578999999999999999999999999999998643322222111 2578899999999998888764
Q ss_pred --CCCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHH----HHcCCCEEEEeccccccCCCCCCCccCCCC
Q 019795 80 --QKFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAM----AKYNCKKLVFSSSATIYGQPEKIPCVEDFP 149 (335)
Q Consensus 80 --~~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~ 149 (335)
.++|+|||+||.... ..+.++++..+++|+.++.++++.+ ++.+.++||++||...+. +
T Consensus 75 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~-----------~ 143 (234)
T 2ehd_A 75 AFGELSALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRGGGTIVNVGSLAGKN-----------P 143 (234)
T ss_dssp HHSCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCTTTTS-----------C
T ss_pred HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEECCchhcC-----------C
Confidence 379999999997432 2234567789999999998777664 445668999999987653 2
Q ss_pred CCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 150 YGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 150 ~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
..+...|+.+|...+.+++.++.+. .++++.++||+.+..+
T Consensus 144 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~ 186 (234)
T 2ehd_A 144 FKGGAAYNASKFGLLGLAGAAMLDLREANVRVVNVLPGSVDTG 186 (234)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEECC-----
T ss_pred CCCCchhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCC
Confidence 3445689999999999988877653 2899999999887554
|
| >1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.89 E-value=6.9e-22 Score=172.38 Aligned_cols=175 Identities=17% Similarity=0.084 Sum_probs=136.9
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCC---CeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHh
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGG---FKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFS 78 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~ 78 (335)
+++|+||||||+|+||++++++|+++| ++|++++|+....... ..+... ..++.++.+|++|.+++.++++
T Consensus 19 ~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~-~~l~~~-----~~~~~~~~~Dl~~~~~v~~~~~ 92 (267)
T 1sny_A 19 SHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKEL-EDLAKN-----HSNIHILEIDLRNFDAYDKLVA 92 (267)
T ss_dssp -CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHH-HHHHHH-----CTTEEEEECCTTCGGGHHHHHH
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHH-HHhhcc-----CCceEEEEecCCChHHHHHHHH
Confidence 568899999999999999999999999 9999999987665432 223221 1478999999999999988887
Q ss_pred cC-------CCCEEEEcccccc-----hhhhhcChHHHHHHhHHHHHHHHHHHHHc----------C-----CCEEEEec
Q 019795 79 SQ-------KFEAVIHFGALKA-----VAESVQHPFRYFDNNLIGTINLYQAMAKY----------N-----CKKLVFSS 131 (335)
Q Consensus 79 ~~-------~~d~vi~~a~~~~-----~~~~~~~~~~~~~~nv~~~~~l~~~~~~~----------~-----~~~~v~~S 131 (335)
.. ++|+|||+||... ...+.++++..+++|+.++.++++++... + .++||++|
T Consensus 93 ~~~~~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~is 172 (267)
T 1sny_A 93 DIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMS 172 (267)
T ss_dssp HHHHHHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEEC
T ss_pred HHHHhcCCCCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCCceEEEEe
Confidence 42 6999999999753 22344567789999999999999987543 2 46899999
Q ss_pred cccccCCCCCCCccCCCCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 132 SATIYGQPEKIPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 132 s~~vyg~~~~~~~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
|...+.... +..+...|+.+|...+.+++.++.+. .++++.++||+.|..+
T Consensus 173 S~~~~~~~~--------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~ 225 (267)
T 1sny_A 173 SILGSIQGN--------TDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTD 225 (267)
T ss_dssp CGGGCSTTC--------CSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCST
T ss_pred cccccccCC--------CCCCchHHHHHHHHHHHHHHHHHHHhhcCCcEEEEeCCcceecC
Confidence 987763221 12355689999999999999887762 2899999999998665
|
| >3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=99.89 E-value=1.7e-22 Score=176.05 Aligned_cols=167 Identities=19% Similarity=0.224 Sum_probs=133.1
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
+++|+||||||+|+||+++++.|+++|++|++++|+.... ..... ..+.++.+|++|.+++.++++.
T Consensus 14 ~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~-------~~~~~----~~~~~~~~Dv~d~~~v~~~~~~~~ 82 (266)
T 3p19_A 14 SMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERL-------KALNL----PNTLCAQVDVTDKYTFDTAITRAE 82 (266)
T ss_dssp -CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHH-------HTTCC----TTEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHH-------HHhhc----CCceEEEecCCCHHHHHHHHHHHH
Confidence 3568999999999999999999999999999999863321 11111 4678899999999999888874
Q ss_pred ---CCCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHHH----HcCCCEEEEeccccccCCCCCCCccCCC
Q 019795 80 ---QKFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAMA----KYNCKKLVFSSSATIYGQPEKIPCVEDF 148 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~v~~Ss~~vyg~~~~~~~~e~~ 148 (335)
.++|++||+||.... ..+.++++.++++|+.|+.++++++. +.+.++||++||...+.
T Consensus 83 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~IV~isS~~~~~----------- 151 (266)
T 3p19_A 83 KIYGPADAIVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARNCGTIINISSIAGKK----------- 151 (266)
T ss_dssp HHHCSEEEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTS-----------
T ss_pred HHCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhCC-----------
Confidence 379999999997432 22445677899999999999888754 45667999999977652
Q ss_pred CCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 149 PYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 149 ~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
+..+...|+.||...+.+++.++.++ .++++.+++|+.|..+
T Consensus 152 ~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~ 195 (266)
T 3p19_A 152 TFPDHAAYCGTKFAVHAISENVREEVAASNVRVMTIAPSAVKTE 195 (266)
T ss_dssp CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSS
T ss_pred CCCCCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCccccc
Confidence 23345689999999999999888773 2899999999999776
|
| >3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.89 E-value=2.2e-22 Score=175.91 Aligned_cols=172 Identities=14% Similarity=0.011 Sum_probs=134.7
Q ss_pred CCCCeEEEEcCC--ChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc
Q 019795 2 ASEKNILVTGGA--GFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS 79 (335)
Q Consensus 2 ~~~~~vlItGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~ 79 (335)
+++|+||||||+ |+||+++++.|+++|++|++++|+.. ..+..+.+.+.. ..+.++.+|++|+++++++++.
T Consensus 12 ~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~~~~~~-----~~~~~~~~Dv~~~~~v~~~~~~ 85 (271)
T 3ek2_A 12 LDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDR-FKDRITEFAAEF-----GSELVFPCDVADDAQIDALFAS 85 (271)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGG-GHHHHHHHHHHT-----TCCCEEECCTTCHHHHHHHHHH
T ss_pred cCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchh-hHHHHHHHHHHc-----CCcEEEECCCCCHHHHHHHHHH
Confidence 467999999999 99999999999999999999999733 233333333222 3578999999999999988875
Q ss_pred -----CCCCEEEEcccccch---------hhhhcChHHHHHHhHHHHHHHHHHHHHc--CCCEEEEeccccccCCCCCCC
Q 019795 80 -----QKFEAVIHFGALKAV---------AESVQHPFRYFDNNLIGTINLYQAMAKY--NCKKLVFSSSATIYGQPEKIP 143 (335)
Q Consensus 80 -----~~~d~vi~~a~~~~~---------~~~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~v~~Ss~~vyg~~~~~~ 143 (335)
.++|++||+||.... ..+.++++..+++|+.++.++++++... ...++|++||...+.
T Consensus 86 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~------ 159 (271)
T 3ek2_A 86 LKTHWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAER------ 159 (271)
T ss_dssp HHHHCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEECGGGTS------
T ss_pred HHHHcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEecccccc------
Confidence 379999999997543 1345667789999999999999998764 235899999977652
Q ss_pred ccCCCCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 144 CVEDFPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 144 ~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
+..+...|+.||.+.+.+++.++.++ .++++.+++|+.|..+
T Consensus 160 -----~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~ 203 (271)
T 3ek2_A 160 -----AIPNYNTMGLAKAALEASVRYLAVSLGAKGVRVNAISAGPIKTL 203 (271)
T ss_dssp -----BCTTTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCC---
T ss_pred -----CCCCccchhHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccch
Confidence 33445689999999999999888763 3799999999998775
|
| >3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=1.1e-21 Score=171.10 Aligned_cols=174 Identities=13% Similarity=0.018 Sum_probs=136.0
Q ss_pred CCCCeEEEEcCCCh--hhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc
Q 019795 2 ASEKNILVTGGAGF--IGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS 79 (335)
Q Consensus 2 ~~~~~vlItGatG~--iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~ 79 (335)
+++|++|||||+|+ ||+++++.|+++|++|++++|+... .+....+.+..+ ..++.++.+|++|+++++++++.
T Consensus 5 l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~ 80 (266)
T 3oig_A 5 LEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERL-EKSVHELAGTLD---RNDSIILPCDVTNDAEIETCFAS 80 (266)
T ss_dssp CTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGG-HHHHHHHHHTSS---SCCCEEEECCCSSSHHHHHHHHH
T ss_pred cCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHH-HHHHHHHHHhcC---CCCceEEeCCCCCHHHHHHHHHH
Confidence 45689999999988 9999999999999999999987432 233333332221 13789999999999999988875
Q ss_pred -----CCCCEEEEcccccc--------hhhhhcChHHHHHHhHHHHHHHHHHHHHcC--CCEEEEeccccccCCCCCCCc
Q 019795 80 -----QKFEAVIHFGALKA--------VAESVQHPFRYFDNNLIGTINLYQAMAKYN--CKKLVFSSSATIYGQPEKIPC 144 (335)
Q Consensus 80 -----~~~d~vi~~a~~~~--------~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~--~~~~v~~Ss~~vyg~~~~~~~ 144 (335)
.++|++||+|+... ...+.+.++..+++|+.++.++++++...- ..+||++||...+.
T Consensus 81 ~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~------- 153 (266)
T 3oig_A 81 IKEQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTYLGGEL------- 153 (266)
T ss_dssp HHHHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTS-------
T ss_pred HHHHhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEecccccc-------
Confidence 37999999999753 122445667889999999999999987652 25899999977652
Q ss_pred cCCCCCCCCChhHHhHHHHHHHHHHHHhhCC--CCeEEEEecccccCC
Q 019795 145 VEDFPYGAMNPYGRTKQWCEEIAFDVQKADP--EWRIILLRYFNPVGA 190 (335)
Q Consensus 145 ~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~--~~~~~~lR~~~v~G~ 190 (335)
+......|+.||...+.+++.++.+.. ++++.+++|+.|..+
T Consensus 154 ----~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~ 197 (266)
T 3oig_A 154 ----VMPNYNVMGVAKASLDASVKYLAADLGKENIRVNSISAGPIRTL 197 (266)
T ss_dssp ----CCTTTHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSG
T ss_pred ----cCCCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCccccc
Confidence 333456899999999999998887642 789999999998775
|
| >3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=99.89 E-value=2e-22 Score=174.94 Aligned_cols=167 Identities=16% Similarity=0.212 Sum_probs=129.1
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
+++|++|||||+|+||++++++|+++|++|++++|... ...+.+ ...+.++.+|++|++++.++++.
T Consensus 7 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~---~~~~~~--------~~~~~~~~~D~~~~~~v~~~~~~~~ 75 (257)
T 3tl3_A 7 IRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGE---DVVADL--------GDRARFAAADVTDEAAVASALDLAE 75 (257)
T ss_dssp ---CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCH---HHHHHT--------CTTEEEEECCTTCHHHHHHHHHHHH
T ss_pred ecCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCchH---HHHHhc--------CCceEEEECCCCCHHHHHHHHHHHH
Confidence 45789999999999999999999999999999998422 222221 15788999999999999888764
Q ss_pred --CCCCEEEEcccccchh--------hhhcChHHHHHHhHHHHHHHHHHHHHc------------CCCEEEEeccccccC
Q 019795 80 --QKFEAVIHFGALKAVA--------ESVQHPFRYFDNNLIGTINLYQAMAKY------------NCKKLVFSSSATIYG 137 (335)
Q Consensus 80 --~~~d~vi~~a~~~~~~--------~~~~~~~~~~~~nv~~~~~l~~~~~~~------------~~~~~v~~Ss~~vyg 137 (335)
.++|++||+||..... .+.++++..+++|+.++.++++++... +..+||++||...+.
T Consensus 76 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~ 155 (257)
T 3tl3_A 76 TMGTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFD 155 (257)
T ss_dssp HHSCEEEEEECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCCC--C
T ss_pred HhCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcchhhcC
Confidence 3899999999975321 244567789999999999999987653 234899999977552
Q ss_pred CCCCCCccCCCCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 138 QPEKIPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 138 ~~~~~~~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
+..+...|+.||...+.+++.++.++ .++++.+++|+.|..+
T Consensus 156 -----------~~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~ 199 (257)
T 3tl3_A 156 -----------GQIGQAAYSASKGGVVGMTLPIARDLASHRIRVMTIAPGLFDTP 199 (257)
T ss_dssp -----------CHHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCT
T ss_pred -----------CCCCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEEEecCccCh
Confidence 22234579999999999999888764 2789999999998776
|
| >3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=1.2e-21 Score=173.25 Aligned_cols=172 Identities=12% Similarity=0.003 Sum_probs=135.0
Q ss_pred CCCCeEEEEcCCCh--hhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc
Q 019795 2 ASEKNILVTGGAGF--IGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS 79 (335)
Q Consensus 2 ~~~~~vlItGatG~--iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~ 79 (335)
+++|++|||||+|+ ||+++++.|+++|++|++++|+... .+....+.+.. ..+.++.+|++|+++++++++.
T Consensus 29 l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~-~~~~~~~~~~~-----~~~~~~~~Dv~d~~~v~~~~~~ 102 (293)
T 3grk_A 29 LQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDAL-KKRVEPLAEEL-----GAFVAGHCDVADAASIDAVFET 102 (293)
T ss_dssp TTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHH-HHHHHHHHHHH-----TCEEEEECCTTCHHHHHHHHHH
T ss_pred CCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHH-HHHHHHHHHhc-----CCceEEECCCCCHHHHHHHHHH
Confidence 56789999999988 9999999999999999999986321 22222222221 3578999999999999988875
Q ss_pred -----CCCCEEEEcccccch--------hhhhcChHHHHHHhHHHHHHHHHHHHHc--CCCEEEEeccccccCCCCCCCc
Q 019795 80 -----QKFEAVIHFGALKAV--------AESVQHPFRYFDNNLIGTINLYQAMAKY--NCKKLVFSSSATIYGQPEKIPC 144 (335)
Q Consensus 80 -----~~~d~vi~~a~~~~~--------~~~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~v~~Ss~~vyg~~~~~~~ 144 (335)
.++|++||+||.... ..+.++++..+++|+.++.++++++... ...+||++||...+.
T Consensus 103 ~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~------- 175 (293)
T 3grk_A 103 LEKKWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTYYGAEK------- 175 (293)
T ss_dssp HHHHTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEECGGGTS-------
T ss_pred HHHhcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeehhhcc-------
Confidence 389999999997531 2345667789999999999999998764 235899999977652
Q ss_pred cCCCCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 145 VEDFPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 145 ~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
+......|+.||...+.+++.++.++ .++++.+++|+.|..+
T Consensus 176 ----~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~ 219 (293)
T 3grk_A 176 ----VMPNYNVMGVAKAALEASVKYLAVDLGPQNIRVNAISAGPIKTL 219 (293)
T ss_dssp ----BCTTTTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC-
T ss_pred ----CCCchHHHHHHHHHHHHHHHHHHHHHhHhCCEEEEEecCCCcch
Confidence 23345689999999999999888774 2799999999999876
|
| >3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.89 E-value=2e-22 Score=179.55 Aligned_cols=186 Identities=17% Similarity=0.116 Sum_probs=139.0
Q ss_pred CCCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCH-HHHHHHHhc
Q 019795 1 MASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNK-DDLDKLFSS 79 (335)
Q Consensus 1 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~-~~~~~~~~~ 79 (335)
|+++|+||||||+|+||++++++|+++|++|++++|+........+.+....+ .++.++.+|++|. ++++++++.
T Consensus 9 ~~~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~----~~~~~~~~Dl~~~~~~v~~~~~~ 84 (311)
T 3o26_A 9 VTKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNH----ENVVFHQLDVTDPIATMSSLADF 84 (311)
T ss_dssp ---CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTC----CSEEEEECCTTSCHHHHHHHHHH
T ss_pred cCCCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC----CceEEEEccCCCcHHHHHHHHHH
Confidence 45678999999999999999999999999999999987665555555544322 5789999999997 777776653
Q ss_pred -----CCCCEEEEcccccch----------------------------------hhhhcChHHHHHHhHHHHHHHHHHHH
Q 019795 80 -----QKFEAVIHFGALKAV----------------------------------AESVQHPFRYFDNNLIGTINLYQAMA 120 (335)
Q Consensus 80 -----~~~d~vi~~a~~~~~----------------------------------~~~~~~~~~~~~~nv~~~~~l~~~~~ 120 (335)
.++|+|||+||.... ..+.+.++..+++|+.|+.++++++.
T Consensus 85 ~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~ 164 (311)
T 3o26_A 85 IKTHFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLI 164 (311)
T ss_dssp HHHHHSSCCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred HHHhCCCCCEEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhhhhhheeeeeehHHHHHHHhh
Confidence 389999999997521 11234556789999999999999875
Q ss_pred H----cCCCEEEEeccccccCCCCC--------------------------------CCccCCCCCCCCChhHHhHHHHH
Q 019795 121 K----YNCKKLVFSSSATIYGQPEK--------------------------------IPCVEDFPYGAMNPYGRTKQWCE 164 (335)
Q Consensus 121 ~----~~~~~~v~~Ss~~vyg~~~~--------------------------------~~~~e~~~~~~~~~Y~~sK~~~E 164 (335)
. .+.++||++||...+..... ....+.....+...|+.||.+.+
T Consensus 165 ~~l~~~~~~~IV~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~ 244 (311)
T 3o26_A 165 PLLQLSDSPRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKACLN 244 (311)
T ss_dssp HHHTTSSSCEEEEECCGGGSGGGCCCHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHTTCTTTTTCCSSCHHHHHHHHHHH
T ss_pred HhhccCCCCeEEEEecCCcccccccchhhhhhhccccccchhHHHHHHHHHHhhhhccccccccCcccchhhHHHHHHHH
Confidence 3 34569999999765421100 00111111234467999999999
Q ss_pred HHHHHHHhhCCCCeEEEEecccccCC
Q 019795 165 EIAFDVQKADPEWRIILLRYFNPVGA 190 (335)
Q Consensus 165 ~~~~~~~~~~~~~~~~~lR~~~v~G~ 190 (335)
.+++.++.+++++.+.++.||.|..+
T Consensus 245 ~~~~~la~e~~~i~v~~v~PG~v~T~ 270 (311)
T 3o26_A 245 AYTRVLANKIPKFQVNCVCPGLVKTE 270 (311)
T ss_dssp HHHHHHHHHCTTSEEEEECCCSBCSG
T ss_pred HHHHHHHhhcCCceEEEecCCceecC
Confidence 99999999987899999999998665
|
| >1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.89 E-value=1.1e-22 Score=177.97 Aligned_cols=173 Identities=17% Similarity=0.104 Sum_probs=135.5
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
+++|+||||||+|+||+++++.|+++|++|++++|+........+.+... ..++.++.+|++|++++.++++.
T Consensus 29 l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~-----~~~~~~~~~Dl~~~~~v~~~~~~~~ 103 (272)
T 1yb1_A 29 VTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGL-----GAKVHTFVVDCSNREDIYSSAKKVK 103 (272)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-----TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhc-----CCeEEEEEeeCCCHHHHHHHHHHHH
Confidence 45789999999999999999999999999999999755444333333322 14788999999999999888764
Q ss_pred ---CCCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHHH----HcCCCEEEEeccccccCCCCCCCccCCC
Q 019795 80 ---QKFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAMA----KYNCKKLVFSSSATIYGQPEKIPCVEDF 148 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~v~~Ss~~vyg~~~~~~~~e~~ 148 (335)
.++|+|||+||.... ..+.++++..+++|+.++.++++++. +.+.++||++||...+.
T Consensus 104 ~~~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~----------- 172 (272)
T 1yb1_A 104 AEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHV----------- 172 (272)
T ss_dssp HHTCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CC-----------
T ss_pred HHCCCCcEEEECCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEechhhcC-----------
Confidence 379999999997432 22345667899999999988888764 34667999999987652
Q ss_pred CCCCCChhHHhHHHHHHHHHHHHhhC-----CCCeEEEEecccccCC
Q 019795 149 PYGAMNPYGRTKQWCEEIAFDVQKAD-----PEWRIILLRYFNPVGA 190 (335)
Q Consensus 149 ~~~~~~~Y~~sK~~~E~~~~~~~~~~-----~~~~~~~lR~~~v~G~ 190 (335)
+..+...|+.+|...|.+++.++.+. .+++++++||+.+.++
T Consensus 173 ~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~~~gi~v~~v~Pg~v~t~ 219 (272)
T 1yb1_A 173 SVPFLLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTG 219 (272)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHC
T ss_pred CCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCcccCC
Confidence 12234579999999999999888763 3899999999998776
|
| >1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=2.1e-22 Score=176.15 Aligned_cols=185 Identities=15% Similarity=0.029 Sum_probs=139.1
Q ss_pred CCCCCeEEEEcCCChhhHHHHHHHHh-CCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc
Q 019795 1 MASEKNILVTGGAGFIGTHCALQLLQ-GGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS 79 (335)
Q Consensus 1 ~~~~~~vlItGatG~iG~~l~~~L~~-~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~ 79 (335)
|+++|+||||||+|+||+++++.|++ .|++|++++|+........+.+... ..++.++.+|++|.+++.++++.
T Consensus 1 ~~~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~-----~~~~~~~~~Dl~~~~~~~~~~~~ 75 (276)
T 1wma_A 1 SSGIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAE-----GLSPRFHQLDIDDLQSIRALRDF 75 (276)
T ss_dssp -CCCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHT-----TCCCEEEECCTTCHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhc-----CCeeEEEECCCCCHHHHHHHHHH
Confidence 57889999999999999999999999 9999999999755444444444322 14688999999999999888874
Q ss_pred -----CCCCEEEEcccccchhhh----hcChHHHHHHhHHHHHHHHHHHHHcC--CCEEEEeccccccCC-CC-------
Q 019795 80 -----QKFEAVIHFGALKAVAES----VQHPFRYFDNNLIGTINLYQAMAKYN--CKKLVFSSSATIYGQ-PE------- 140 (335)
Q Consensus 80 -----~~~d~vi~~a~~~~~~~~----~~~~~~~~~~nv~~~~~l~~~~~~~~--~~~~v~~Ss~~vyg~-~~------- 140 (335)
.++|+|||+||....... .++++..+++|+.++.++++++.... .++||++||...+.. ..
T Consensus 76 ~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~~~~ 155 (276)
T 1wma_A 76 LRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQ 155 (276)
T ss_dssp HHHHHSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHHHHTSCHHHHH
T ss_pred HHHhcCCCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEECChhhhcccccCChhHHh
Confidence 279999999997532211 34567889999999999999998752 248999999766521 00
Q ss_pred ---CCCccCCC-------------------CCCCCChhHHhHHHHHHHHHHHHhhC------CCCeEEEEecccccCC
Q 019795 141 ---KIPCVEDF-------------------PYGAMNPYGRTKQWCEEIAFDVQKAD------PEWRIILLRYFNPVGA 190 (335)
Q Consensus 141 ---~~~~~e~~-------------------~~~~~~~Y~~sK~~~E~~~~~~~~~~------~~~~~~~lR~~~v~G~ 190 (335)
..+++|+. +..|...|+.||.+.|.+++.++.++ .++++.+++|+.|.++
T Consensus 156 ~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~~~i~v~~v~PG~v~t~ 233 (276)
T 1wma_A 156 KFRSETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTD 233 (276)
T ss_dssp HHHCSSCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCST
T ss_pred hccccccchhhhhhhhhhhhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHhhcccCCCceEEEEecCCccccC
Confidence 01122211 12344789999999999999887663 3899999999998776
|
| >1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.89 E-value=7.9e-23 Score=177.03 Aligned_cols=169 Identities=15% Similarity=0.124 Sum_probs=133.5
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
+++|++|||||+|+||++++++|+++|++|++++|+........+.+ + .++.++.+|++|+++++++++.
T Consensus 4 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~----~~~~~~~~D~~~~~~v~~~~~~~~ 75 (253)
T 1hxh_A 4 LQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL----G----ERSMFVRHDVSSEADWTLVMAAVQ 75 (253)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH----C----TTEEEECCCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc----C----CceEEEEccCCCHHHHHHHHHHHH
Confidence 46799999999999999999999999999999998654333222222 1 4688999999999998888774
Q ss_pred ---CCCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHHH----HcCCCEEEEeccccccCCCCCCCccCCC
Q 019795 80 ---QKFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAMA----KYNCKKLVFSSSATIYGQPEKIPCVEDF 148 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~v~~Ss~~vyg~~~~~~~~e~~ 148 (335)
.++|+|||+||.... ..+.++++..+++|+.++.++++++. +.+ ++||++||...+.
T Consensus 76 ~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~----------- 143 (253)
T 1hxh_A 76 RRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG-GSIINMASVSSWL----------- 143 (253)
T ss_dssp HHHCSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC-EEEEEECCGGGTS-----------
T ss_pred HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcC-CEEEEEcchhhcC-----------
Confidence 368999999997432 22445677899999999988887654 345 7999999987662
Q ss_pred CCCCCChhHHhHHHHHHHHHHHHhhC----CCCeEEEEecccccCC
Q 019795 149 PYGAMNPYGRTKQWCEEIAFDVQKAD----PEWRIILLRYFNPVGA 190 (335)
Q Consensus 149 ~~~~~~~Y~~sK~~~E~~~~~~~~~~----~~~~~~~lR~~~v~G~ 190 (335)
+..+...|+.||...+.+++.++.+. +++++.++||+.++++
T Consensus 144 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~ 189 (253)
T 1hxh_A 144 PIEQYAGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTP 189 (253)
T ss_dssp CCTTBHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCH
T ss_pred CCCCCccHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEEeCCccCc
Confidence 23345689999999999999887663 2799999999999886
|
| >3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} | Back alignment and structure |
|---|
Probab=99.89 E-value=3.3e-22 Score=173.64 Aligned_cols=172 Identities=16% Similarity=0.187 Sum_probs=134.7
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCC--chhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc-
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNS--VPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS- 79 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~- 79 (335)
++|++|||||+|+||++++++|+++|++|++++|+... .....+.+... ..++.++.+|++|+++++++++.
T Consensus 1 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~ 75 (258)
T 3a28_C 1 MSKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAA-----DQKAVFVGLDVTDKANFDSAIDEA 75 (258)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTT-----TCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhc-----CCcEEEEEccCCCHHHHHHHHHHH
Confidence 36899999999999999999999999999999987544 33333333221 25688999999999998888764
Q ss_pred ----CCCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHHHH----cCC-CEEEEeccccccCCCCCCCccC
Q 019795 80 ----QKFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAMAK----YNC-KKLVFSSSATIYGQPEKIPCVE 146 (335)
Q Consensus 80 ----~~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~-~~~v~~Ss~~vyg~~~~~~~~e 146 (335)
.++|++||+||.... ..+.++++..+++|+.++.++++++.. .+. ++||++||...+.
T Consensus 76 ~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--------- 146 (258)
T 3a28_C 76 AEKLGGFDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELGVKGKIINAASIAAIQ--------- 146 (258)
T ss_dssp HHHHTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGTS---------
T ss_pred HHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCcEEEEECcchhcc---------
Confidence 379999999997432 224456778999999999999998764 355 7999999977652
Q ss_pred CCCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 147 DFPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 147 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
+..+...|+.+|...+.+++.++.+. .++++.+++|+.+..+
T Consensus 147 --~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~ 190 (258)
T 3a28_C 147 --GFPILSAYSTTKFAVRGLTQAAAQELAPKGHTVNAYAPGIVGTG 190 (258)
T ss_dssp --CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSH
T ss_pred --CCCCchhHHHHHHHHHHHHHHHHHHHHhhCeEEEEEECCccCCh
Confidence 23345689999999999999887663 2799999999988664
|
| >2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.89 E-value=2.8e-22 Score=174.52 Aligned_cols=169 Identities=20% Similarity=0.183 Sum_probs=132.9
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
+++|++|||||+|+||++++++|+++|++|++++|+........+.+ ..++.++.+|++|+++++++++.
T Consensus 4 l~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~--------~~~~~~~~~D~~~~~~v~~~~~~~~ 75 (263)
T 2a4k_A 4 LSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAAL--------EAEAIAVVADVSDPKAVEAVFAEAL 75 (263)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTC--------CSSEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh--------cCceEEEEcCCCCHHHHHHHHHHHH
Confidence 46789999999999999999999999999999999754332222211 14678899999999999888874
Q ss_pred ---CCCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHHHHcC--CCEEEEeccccccCCCCCCCccCCCCC
Q 019795 80 ---QKFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAMAKYN--CKKLVFSSSATIYGQPEKIPCVEDFPY 150 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~~~--~~~~v~~Ss~~vyg~~~~~~~~e~~~~ 150 (335)
.++|++||+||.... ..+.++++..+++|+.++.++++++...- .++||++||...++.
T Consensus 76 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~------------ 143 (263)
T 2a4k_A 76 EEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGLGA------------ 143 (263)
T ss_dssp HHHSCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTCCH------------
T ss_pred HHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEecchhcCC------------
Confidence 378999999997432 22345567899999999999999987642 359999999876521
Q ss_pred CCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 151 GAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 151 ~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
.+...|+.||...+.+++.++.+. .++++.+++|+.|.++
T Consensus 144 ~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~ 185 (263)
T 2a4k_A 144 FGLAHYAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTP 185 (263)
T ss_dssp HHHHHHHHCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCG
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCcCcCc
Confidence 123579999999999998887663 2799999999999876
|
| >1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.88 E-value=5e-22 Score=175.94 Aligned_cols=176 Identities=16% Similarity=0.150 Sum_probs=136.4
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
+++|++|||||+|+||+++++.|+++|++|++++|+........+.+..... ...++.++.+|++|++++.++++.
T Consensus 24 l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~~~Dv~d~~~v~~~~~~~~ 101 (297)
T 1xhl_A 24 FSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGV--PAEKINAVVADVTEASGQDDIINTTL 101 (297)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC--CGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC--CCceEEEEecCCCCHHHHHHHHHHHH
Confidence 4568999999999999999999999999999999976544444444432110 001688999999999999888774
Q ss_pred ---CCCCEEEEcccccc------hhhhhcChHHHHHHhHHHHHHHHHHHHH----cCCCEEEEeccccccCCCCCCCccC
Q 019795 80 ---QKFEAVIHFGALKA------VAESVQHPFRYFDNNLIGTINLYQAMAK----YNCKKLVFSSSATIYGQPEKIPCVE 146 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~------~~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~v~~Ss~~vyg~~~~~~~~e 146 (335)
.++|+|||+||... ...+.++++..+++|+.++.++++++.. .+ ++||++||...+...
T Consensus 102 ~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-g~IV~isS~~~~~~~------- 173 (297)
T 1xhl_A 102 AKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK-GEIVNVSSIVAGPQA------- 173 (297)
T ss_dssp HHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEECCGGGSSSC-------
T ss_pred HhcCCCCEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CEEEEEcCchhccCC-------
Confidence 37999999999642 2224556778999999999999998654 34 799999997765311
Q ss_pred CCCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 147 DFPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 147 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
..+...|+.+|...+.+++.++.+. .++++.+++|+.|.++
T Consensus 174 ---~~~~~~Y~asKaa~~~l~~~la~el~~~gI~v~~v~PG~v~T~ 216 (297)
T 1xhl_A 174 ---HSGYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATG 216 (297)
T ss_dssp ---CTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSS
T ss_pred ---CCCcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcCc
Confidence 1344679999999999999887652 2899999999999876
|
| >1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.88 E-value=1.9e-22 Score=176.33 Aligned_cols=169 Identities=20% Similarity=0.186 Sum_probs=131.6
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
+++|++|||||+|+||+++++.|+++|++|++++|++.......+.+ .++.++.+|++|+++++++++.
T Consensus 7 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---------~~~~~~~~Dv~d~~~v~~~~~~~~ 77 (270)
T 1yde_A 7 YAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQEL---------PGAVFILCDVTQEDDVKTLVSETI 77 (270)
T ss_dssp TTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC---------TTEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---------cCCeEEEcCCCCHHHHHHHHHHHH
Confidence 34689999999999999999999999999999998644332222211 2478899999999999888874
Q ss_pred ---CCCCEEEEcccccch-----hhhhcChHHHHHHhHHHHHHHHHHHHHc---CCCEEEEeccccccCCCCCCCccCCC
Q 019795 80 ---QKFEAVIHFGALKAV-----AESVQHPFRYFDNNLIGTINLYQAMAKY---NCKKLVFSSSATIYGQPEKIPCVEDF 148 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~~-----~~~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~~v~~Ss~~vyg~~~~~~~~e~~ 148 (335)
.++|++||+||.... ..+.++++..+++|+.++.++++++... +.++||++||...+.
T Consensus 78 ~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~----------- 146 (270)
T 1yde_A 78 RRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGAI----------- 146 (270)
T ss_dssp HHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHHHH-----------
T ss_pred HHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCEEEEEcCccccC-----------
Confidence 379999999997421 1234556789999999999999987531 247999999965431
Q ss_pred CCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 149 PYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 149 ~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
+......|+.+|...+.+++.++.+. .++++.++||+.++++
T Consensus 147 ~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~Pg~v~t~ 190 (270)
T 1yde_A 147 GQAQAVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTP 190 (270)
T ss_dssp CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCH
T ss_pred CCCCCcccHHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCccccc
Confidence 12234579999999999999887662 2899999999999886
|
| >1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=7.8e-23 Score=177.41 Aligned_cols=166 Identities=15% Similarity=0.030 Sum_probs=125.4
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcC--C
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQ--K 81 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~--~ 81 (335)
||+||||||+|+||+++++.|+++|++|++++|+..... . . +.+|++|.++++++++.. +
T Consensus 1 mk~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~---------------~--~-~~~Dl~~~~~v~~~~~~~~~~ 62 (257)
T 1fjh_A 1 MSIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVI---------------A--D-LSTAEGRKQAIADVLAKCSKG 62 (257)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEE---------------C--C-TTSHHHHHHHHHHHHTTCTTC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhc---------------c--c-cccCCCCHHHHHHHHHHhCCC
Confidence 579999999999999999999999999999999754321 1 1 668999999999998753 7
Q ss_pred CCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHH----cCCCEEEEeccccccCCCCCCCccCC----------
Q 019795 82 FEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAK----YNCKKLVFSSSATIYGQPEKIPCVED---------- 147 (335)
Q Consensus 82 ~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~v~~Ss~~vyg~~~~~~~~e~---------- 147 (335)
+|+|||+||.... ...++..+++|+.++.++++++.. .+.++||++||...+......+..++
T Consensus 63 id~lv~~Ag~~~~---~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (257)
T 1fjh_A 63 MDGLVLCAGLGPQ---TKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKA 139 (257)
T ss_dssp CSEEEECCCCCTT---CSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHHHH
T ss_pred CCEEEECCCCCCC---cccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhhhccccccchhhhhhcccchhhh
Confidence 8999999997531 234789999999999999998753 45579999999887732111010000
Q ss_pred -------CCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 148 -------FPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 148 -------~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
.+..+...|+.||...+.+++.++.+. .++++.+++|+.+.++
T Consensus 140 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~ 191 (257)
T 1fjh_A 140 RAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETP 191 (257)
T ss_dssp HHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC----
T ss_pred hhhhhcccCCCCccHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCc
Confidence 122244579999999999999877662 2899999999998776
|
| >1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=3.1e-22 Score=172.06 Aligned_cols=163 Identities=14% Similarity=0.122 Sum_probs=130.6
Q ss_pred CCCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc-
Q 019795 1 MASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS- 79 (335)
Q Consensus 1 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~- 79 (335)
|.++|++|||||+|+||++++++|+++|++|++++|+..... ....++.+|++|++++.++++.
T Consensus 4 ~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~---------------~~~~~~~~D~~~~~~v~~~~~~~ 68 (241)
T 1dhr_A 4 SGEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA---------------SASVIVKMTDSFTEQADQVTAEV 68 (241)
T ss_dssp --CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS---------------SEEEECCCCSCHHHHHHHHHHHH
T ss_pred cCCCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhcc---------------CCcEEEEcCCCCHHHHHHHHHHH
Confidence 456789999999999999999999999999999999765421 2346788999999998888774
Q ss_pred ------CCCCEEEEcccccc-----hhhhhcChHHHHHHhHHHHHHHHHHHHHc--CCCEEEEeccccccCCCCCCCccC
Q 019795 80 ------QKFEAVIHFGALKA-----VAESVQHPFRYFDNNLIGTINLYQAMAKY--NCKKLVFSSSATIYGQPEKIPCVE 146 (335)
Q Consensus 80 ------~~~d~vi~~a~~~~-----~~~~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e 146 (335)
.++|+|||+||... ...+.++++..+++|+.++.++++++... ..++||++||...+.
T Consensus 69 ~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--------- 139 (241)
T 1dhr_A 69 GKLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALD--------- 139 (241)
T ss_dssp HHHHTTCCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGS---------
T ss_pred HHHhCCCCCCEEEEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCEEEEECCHHHcc---------
Confidence 48999999999743 22345667789999999999999998764 125899999987662
Q ss_pred CCCCCCCChhHHhHHHHHHHHHHHHhhC----CCCeEEEEecccccC
Q 019795 147 DFPYGAMNPYGRTKQWCEEIAFDVQKAD----PEWRIILLRYFNPVG 189 (335)
Q Consensus 147 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~----~~~~~~~lR~~~v~G 189 (335)
+..+...|+.+|...+.+++.++.++ .++++.+++|+.+-.
T Consensus 140 --~~~~~~~Y~asK~a~~~~~~~la~e~~~~~~gi~v~~v~PG~v~T 184 (241)
T 1dhr_A 140 --GTPGMIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDT 184 (241)
T ss_dssp --CCTTBHHHHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEEC
T ss_pred --CCCCchHHHHHHHHHHHHHHHHHHHhccCCCCeEEEEEecCcccC
Confidence 23345689999999999999988774 269999999987744
|
| >4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=99.88 E-value=5.1e-22 Score=173.94 Aligned_cols=173 Identities=17% Similarity=0.094 Sum_probs=140.5
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
+++|++|||||+|+||+++++.|+++|++|++++|+........+.+... ...+.++.+|++|.+++.++++.
T Consensus 31 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~~~~~~~~~~ 105 (275)
T 4imr_A 31 LRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIAS-----GGTAQELAGDLSEAGAGTDLIERAE 105 (275)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHT-----TCCEEEEECCTTSTTHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc-----CCeEEEEEecCCCHHHHHHHHHHHH
Confidence 46799999999999999999999999999999999888777666665442 25788999999999888877764
Q ss_pred --CCCCEEEEcccccc----hhhhhcChHHHHHHhHHHHHHHHHHHH----HcCCCEEEEeccccccCCCCCCCccCCCC
Q 019795 80 --QKFEAVIHFGALKA----VAESVQHPFRYFDNNLIGTINLYQAMA----KYNCKKLVFSSSATIYGQPEKIPCVEDFP 149 (335)
Q Consensus 80 --~~~d~vi~~a~~~~----~~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~ 149 (335)
.++|++||+||... ...+.++++..+++|+.++.++++++. +.+.++||++||...+. +
T Consensus 106 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~-----------~ 174 (275)
T 4imr_A 106 AIAPVDILVINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARKWGRVVSIGSINQLR-----------P 174 (275)
T ss_dssp HHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS-----------C
T ss_pred HhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCC-----------C
Confidence 47999999999742 222456677899999999999999863 34557999999977652 3
Q ss_pred CCCCChhHHhHHHHHHHHHHHHhhCC--CCeEEEEecccccCC
Q 019795 150 YGAMNPYGRTKQWCEEIAFDVQKADP--EWRIILLRYFNPVGA 190 (335)
Q Consensus 150 ~~~~~~Y~~sK~~~E~~~~~~~~~~~--~~~~~~lR~~~v~G~ 190 (335)
..+...|+.||...+.+++.++.++. ++++.+++|+.|..+
T Consensus 175 ~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~ 217 (275)
T 4imr_A 175 KSVVTAYAATKAAQHNLIQSQARDFAGDNVLLNTLAPGLVDTD 217 (275)
T ss_dssp CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSH
T ss_pred CCCchhhHHHHHHHHHHHHHHHHHhcccCcEEEEEEeccccCc
Confidence 33445799999999999998887742 789999999988665
|
| >1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.88 E-value=3.5e-22 Score=173.88 Aligned_cols=173 Identities=19% Similarity=0.171 Sum_probs=134.5
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
+++|++|||||+|+||++++++|+++|++|++++|+..........+... ..++.++.+|++|++++.++++.
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~ 79 (262)
T 1zem_A 5 FNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREK-----GVEARSYVCDVTSEEAVIGTVDSVV 79 (262)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT-----TSCEEEEECCTTCHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-----CCcEEEEEecCCCHHHHHHHHHHHH
Confidence 45789999999999999999999999999999999754443333333221 14688999999999998887764
Q ss_pred ---CCCCEEEEccccc-c----hhhhhcChHHHHHHhHHHHHHHHHHHHH----cCCCEEEEeccccccCCCCCCCccCC
Q 019795 80 ---QKFEAVIHFGALK-A----VAESVQHPFRYFDNNLIGTINLYQAMAK----YNCKKLVFSSSATIYGQPEKIPCVED 147 (335)
Q Consensus 80 ---~~~d~vi~~a~~~-~----~~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~v~~Ss~~vyg~~~~~~~~e~ 147 (335)
.++|+|||+||.. . ...+.++++..+++|+.++.++++++.. .+.++||++||...+.
T Consensus 80 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~---------- 149 (262)
T 1zem_A 80 RDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVK---------- 149 (262)
T ss_dssp HHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHS----------
T ss_pred HHhCCCCEEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcc----------
Confidence 3799999999964 2 1224456778999999999999998654 3557999999976652
Q ss_pred CCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 148 FPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 148 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
+..+...|+.+|...+.+++.++.+. .++++.+++|+.+..+
T Consensus 150 -~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~ 193 (262)
T 1zem_A 150 -GPPNMAAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPG 193 (262)
T ss_dssp -CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSS
T ss_pred -CCCCCchHHHHHHHHHHHHHHHHHHHHhhCeEEEEEecCCcCcc
Confidence 22334579999999999998887653 2799999999987554
|
| >2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=7.4e-22 Score=173.04 Aligned_cols=172 Identities=14% Similarity=0.034 Sum_probs=136.9
Q ss_pred CCCCeEEEEcCC--ChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc
Q 019795 2 ASEKNILVTGGA--GFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS 79 (335)
Q Consensus 2 ~~~~~vlItGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~ 79 (335)
+++|++|||||+ |+||+++++.|+++|++|++++|+.. .....+.+.+.. ..+.++.+|++|++++.++++.
T Consensus 4 l~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~-----~~~~~~~~D~~~~~~v~~~~~~ 77 (275)
T 2pd4_A 4 LKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-LEKRVRPIAQEL-----NSPYVYELDVSKEEHFKSLYNS 77 (275)
T ss_dssp TTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT-THHHHHHHHHHT-----TCCCEEECCTTCHHHHHHHHHH
T ss_pred CCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHHHHhc-----CCcEEEEcCCCCHHHHHHHHHH
Confidence 567999999999 99999999999999999999999764 333444443321 2378899999999999888774
Q ss_pred -----CCCCEEEEcccccch--------hhhhcChHHHHHHhHHHHHHHHHHHHHc--CCCEEEEeccccccCCCCCCCc
Q 019795 80 -----QKFEAVIHFGALKAV--------AESVQHPFRYFDNNLIGTINLYQAMAKY--NCKKLVFSSSATIYGQPEKIPC 144 (335)
Q Consensus 80 -----~~~d~vi~~a~~~~~--------~~~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~v~~Ss~~vyg~~~~~~~ 144 (335)
.++|++||+||.... ..+.++++..+++|+.++.++++++... ..++||++||...+.
T Consensus 78 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~------- 150 (275)
T 2pd4_A 78 VKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTK------- 150 (275)
T ss_dssp HHHHTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTS-------
T ss_pred HHHHcCCCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEecchhcC-------
Confidence 378999999997532 2345667789999999999999998765 125899999976542
Q ss_pred cCCCCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 145 VEDFPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 145 ~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
+..+...|+.||...+.+++.++.+. .++++.+++|+.|.++
T Consensus 151 ----~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~ 194 (275)
T 2pd4_A 151 ----YMAHYNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTL 194 (275)
T ss_dssp ----BCTTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCT
T ss_pred ----CCCCchhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccccc
Confidence 22345679999999999999887763 2899999999999876
|
| >1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=4.7e-22 Score=172.23 Aligned_cols=169 Identities=17% Similarity=0.207 Sum_probs=133.9
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCe-EEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCH-HHHHHHHhc
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFK-VVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNK-DDLDKLFSS 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~-~~~~~~~~~ 79 (335)
+++|+|+||||+|+||++++++|+++|++ |++++|+... +..+.+.+..+ ..++.++.+|++|+ +++.++++.
T Consensus 3 l~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~--~~~~~l~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~ 77 (254)
T 1sby_A 3 LTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENP--TALAELKAINP---KVNITFHTYDVTVPVAESKKLLKK 77 (254)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCH--HHHHHHHHHCT---TSEEEEEECCTTSCHHHHHHHHHH
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchH--HHHHHHHHhCC---CceEEEEEEecCCChHHHHHHHHH
Confidence 56899999999999999999999999996 9999987532 22333333221 24688999999998 888877764
Q ss_pred -----CCCCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHc----C---CCEEEEeccccccCCCCCCCccCC
Q 019795 80 -----QKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKY----N---CKKLVFSSSATIYGQPEKIPCVED 147 (335)
Q Consensus 80 -----~~~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~----~---~~~~v~~Ss~~vyg~~~~~~~~e~ 147 (335)
.++|+|||+||.. +.++++..+++|+.++.++++++... + .++||++||...+.
T Consensus 78 ~~~~~g~id~lv~~Ag~~----~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~---------- 143 (254)
T 1sby_A 78 IFDQLKTVDILINGAGIL----DDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFN---------- 143 (254)
T ss_dssp HHHHHSCCCEEEECCCCC----CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTS----------
T ss_pred HHHhcCCCCEEEECCccC----CHHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhhcc----------
Confidence 3799999999974 35677899999999999999997642 1 35799999987763
Q ss_pred CCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 148 FPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 148 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
+..+...|+.||...+.+++.++.+. .++++.+++|+.|.++
T Consensus 144 -~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~ 187 (254)
T 1sby_A 144 -AIHQVPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTP 187 (254)
T ss_dssp -CCTTSHHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESH
T ss_pred -CCCCchHHHHHHHHHHHHHHHHHHHhccCCeEEEEEecCCccCc
Confidence 23345689999999999999887752 2899999999999876
|
| >3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A | Back alignment and structure |
|---|
Probab=99.88 E-value=1.6e-21 Score=170.14 Aligned_cols=176 Identities=18% Similarity=0.084 Sum_probs=138.3
Q ss_pred CCCCeEEEEcCC--ChhhHHHHHHHHhCCCeEEEEecCCCCc-hhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHh
Q 019795 2 ASEKNILVTGGA--GFIGTHCALQLLQGGFKVVLIDNLHNSV-PEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFS 78 (335)
Q Consensus 2 ~~~~~vlItGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~ 78 (335)
+++|++|||||+ |+||++++++|+++|++|++++|+.... .+..+.+.+..+ .++.++.+|++|.++++++++
T Consensus 18 l~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~----~~~~~~~~Dl~~~~~v~~~~~ 93 (267)
T 3gdg_A 18 LKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYG----IKAKAYKCQVDSYESCEKLVK 93 (267)
T ss_dssp CTTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHHC----CCEECCBCCTTCHHHHHHHHH
T ss_pred cCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhcC----CceeEEecCCCCHHHHHHHHH
Confidence 467999999999 9999999999999999999999877654 444444443322 678899999999999988887
Q ss_pred c-----CCCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHH----HHcCCCEEEEeccccccCCCCCCCcc
Q 019795 79 S-----QKFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAM----AKYNCKKLVFSSSATIYGQPEKIPCV 145 (335)
Q Consensus 79 ~-----~~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~v~~Ss~~vyg~~~~~~~~ 145 (335)
. .++|++||+||.... ..+.++++..+++|+.++.++++++ ++.+.+++|++||...+...
T Consensus 94 ~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~------ 167 (267)
T 3gdg_A 94 DVVADFGQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERGTGSLVITASMSGHIAN------ 167 (267)
T ss_dssp HHHHHTSCCSEEEECCCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCC------
T ss_pred HHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcCCceEEEEccccccccC------
Confidence 5 378999999997532 2245667789999999999999987 44456799999997654211
Q ss_pred CCCCCCCCChhHHhHHHHHHHHHHHHhhCC-CCeEEEEecccccCC
Q 019795 146 EDFPYGAMNPYGRTKQWCEEIAFDVQKADP-EWRIILLRYFNPVGA 190 (335)
Q Consensus 146 e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~-~~~~~~lR~~~v~G~ 190 (335)
...+...|+.||...+.+++.++.++. .+.+.++.|+.+..+
T Consensus 168 ---~~~~~~~Y~~sK~a~~~~~~~la~e~~~~i~v~~v~PG~v~t~ 210 (267)
T 3gdg_A 168 ---FPQEQTSYNVAKAGCIHMARSLANEWRDFARVNSISPGYIDTG 210 (267)
T ss_dssp ---SSSCCHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEEECCEECS
T ss_pred ---CCCCCCcchHHHHHHHHHHHHHHHHhccCcEEEEEECCccccc
Confidence 113456899999999999999998863 368889999888654
|
| >3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=1.8e-22 Score=174.12 Aligned_cols=170 Identities=19% Similarity=0.172 Sum_probs=136.1
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
+++|++|||||+|+||+++++.|+++|++|++++|+..........+ ..++.++.+|++|+++++++++.
T Consensus 4 l~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~--------~~~~~~~~~Dv~~~~~v~~~~~~~~ 75 (247)
T 3rwb_A 4 LAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASI--------GKKARAIAADISDPGSVKALFAEIQ 75 (247)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH--------CTTEEECCCCTTCHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh--------CCceEEEEcCCCCHHHHHHHHHHHH
Confidence 56899999999999999999999999999999998754433333322 15788999999999999988875
Q ss_pred ---CCCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHH----HHHcC-CCEEEEeccccccCCCCCCCccCC
Q 019795 80 ---QKFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQA----MAKYN-CKKLVFSSSATIYGQPEKIPCVED 147 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~----~~~~~-~~~~v~~Ss~~vyg~~~~~~~~e~ 147 (335)
.++|++||+||.... ..+.++++..+++|+.++.+++++ +++.+ .++||++||...+.
T Consensus 76 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~---------- 145 (247)
T 3rwb_A 76 ALTGGIDILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFA---------- 145 (247)
T ss_dssp HHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHH----------
T ss_pred HHCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECchhhcc----------
Confidence 379999999997432 224566778999999999999998 44444 57999999977652
Q ss_pred CCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 148 FPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 148 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
+..+...|+.||...+.+++.++.++ .++++.+++|+.|..+
T Consensus 146 -~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~ 189 (247)
T 3rwb_A 146 -GTPNMAAYVAAKGGVIGFTRALATELGKYNITANAVTPGLIESD 189 (247)
T ss_dssp -TCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCH
T ss_pred -CCCCchhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCc
Confidence 23345689999999999999888773 2899999999988765
|
| >3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=3.1e-22 Score=174.47 Aligned_cols=175 Identities=14% Similarity=0.039 Sum_probs=139.1
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
+++|++|||||+|+||+++++.|+++|++|++++|+........+.+....+ ..++.++.+|++|++++.++++.
T Consensus 6 l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~ 82 (265)
T 3lf2_A 6 LSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFP---GARLFASVCDVLDALQVRAFAEACE 82 (265)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHST---TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcC---CceEEEEeCCCCCHHHHHHHHHHHH
Confidence 4578999999999999999999999999999999976655555555543221 13588999999999999888775
Q ss_pred ---CCCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHHHH----cCCCEEEEeccccccCCCCCCCccCCC
Q 019795 80 ---QKFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAMAK----YNCKKLVFSSSATIYGQPEKIPCVEDF 148 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~v~~Ss~~vyg~~~~~~~~e~~ 148 (335)
.++|++||+||.... ..+.++++..+++|+.++.++++++.. .+..+||++||...+.
T Consensus 83 ~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~----------- 151 (265)
T 3lf2_A 83 RTLGCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRADAAIVCVNSLLASQ----------- 151 (265)
T ss_dssp HHHCSCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEEGGGTS-----------
T ss_pred HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEECCcccCC-----------
Confidence 389999999997432 234566778999999999999999754 3346899999977652
Q ss_pred CCCCCChhHHhHHHHHHHHHHHHhhCC--CCeEEEEecccccCC
Q 019795 149 PYGAMNPYGRTKQWCEEIAFDVQKADP--EWRIILLRYFNPVGA 190 (335)
Q Consensus 149 ~~~~~~~Y~~sK~~~E~~~~~~~~~~~--~~~~~~lR~~~v~G~ 190 (335)
+......|+.+|...+.+++.++.++. ++++.+++|+.|..+
T Consensus 152 ~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~ 195 (265)
T 3lf2_A 152 PEPHMVATSAARAGVKNLVRSMAFEFAPKGVRVNGILIGLVESG 195 (265)
T ss_dssp CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCH
T ss_pred CCCCchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCcCc
Confidence 333456899999999999998887742 789999999988765
|
| >4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} | Back alignment and structure |
|---|
Probab=99.88 E-value=7.9e-22 Score=169.33 Aligned_cols=173 Identities=16% Similarity=0.115 Sum_probs=140.4
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
+++|++|||||+++||+++++.|+++|++|++++|++....+..+++.+.. .++.++.+|++|++++++++++
T Consensus 5 L~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g-----~~~~~~~~Dvt~~~~v~~~~~~~~ 79 (254)
T 4fn4_A 5 LKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMG-----KEVLGVKADVSKKKDVEEFVRRTF 79 (254)
T ss_dssp GTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-----CCEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcC-----CcEEEEEccCCCHHHHHHHHHHHH
Confidence 578999999999999999999999999999999998766666666665432 5788999999999999988875
Q ss_pred ---CCCCEEEEcccccc-----hhhhhcChHHHHHHhHHHHHHHHHHHH----HcCCCEEEEeccccccCCCCCCCccCC
Q 019795 80 ---QKFEAVIHFGALKA-----VAESVQHPFRYFDNNLIGTINLYQAMA----KYNCKKLVFSSSATIYGQPEKIPCVED 147 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~-----~~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~v~~Ss~~vyg~~~~~~~~e~ 147 (335)
+++|++|||||... ...+.++++.++++|+.++.++++++. +.+-.+||++||....-
T Consensus 80 ~~~G~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~~g~~---------- 149 (254)
T 4fn4_A 80 ETYSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASIAGIR---------- 149 (254)
T ss_dssp HHHSCCCEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTC----------
T ss_pred HHcCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEechhhcC----------
Confidence 58999999999632 233556788999999999999999854 44557999999966431
Q ss_pred CCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 148 FPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 148 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
+......|+.||.....+.+.++.++ .++++.++-|+.|--+
T Consensus 150 -~~~~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~ 193 (254)
T 4fn4_A 150 -GGFAGAPYTVAKHGLIGLTRSIAAHYGDQGIRAVAVLPGTVKTN 193 (254)
T ss_dssp -SSSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSS
T ss_pred -CCCCChHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCCCCc
Confidence 22334579999999999999888774 2789999999988554
|
| >3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=99.88 E-value=1e-21 Score=170.18 Aligned_cols=174 Identities=19% Similarity=0.119 Sum_probs=135.2
Q ss_pred CCCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEec-CCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc
Q 019795 1 MASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDN-LHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS 79 (335)
Q Consensus 1 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~ 79 (335)
|+++|++|||||+|+||+++++.|+++|++|+++++ +..........+... ...+.++.+|++|.++++++++.
T Consensus 4 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~ 78 (255)
T 3icc_A 4 MLKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSN-----GGSAFSIGANLESLHGVEALYSS 78 (255)
T ss_dssp TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHT-----TCEEEEEECCTTSHHHHHHHHHH
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhc-----CCceEEEecCcCCHHHHHHHHHH
Confidence 788999999999999999999999999999988644 333333333333322 25788999999999988887764
Q ss_pred -----------CCCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHHHHc--CCCEEEEeccccccCCCCCC
Q 019795 80 -----------QKFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAMAKY--NCKKLVFSSSATIYGQPEKI 142 (335)
Q Consensus 80 -----------~~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~v~~Ss~~vyg~~~~~ 142 (335)
..+|++||+||.... ..+.+.++..+++|+.++.++++++... +..+||++||...+.
T Consensus 79 ~~~~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~isS~~~~~----- 153 (255)
T 3icc_A 79 LDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRI----- 153 (255)
T ss_dssp HHHHHHHHHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGTS-----
T ss_pred HHHHhcccccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCCCCEEEEeCChhhcc-----
Confidence 239999999997432 2244566788999999999999998764 335899999977652
Q ss_pred CccCCCCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 143 PCVEDFPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 143 ~~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
+......|+.||.+.+.+++.++.+. .++++.+++|+.+..+
T Consensus 154 ------~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~ 197 (255)
T 3icc_A 154 ------SLPDFIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFVKTD 197 (255)
T ss_dssp ------CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCS
T ss_pred ------CCCCcchhHHhHHHHHHHHHHHHHHHHhcCeEEEEEEEeeeccc
Confidence 23345689999999999999888763 2799999999998776
|
| >2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.88 E-value=6.4e-22 Score=172.69 Aligned_cols=172 Identities=20% Similarity=0.122 Sum_probs=131.2
Q ss_pred CCCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc-
Q 019795 1 MASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS- 79 (335)
Q Consensus 1 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~- 79 (335)
|+++|++|||||+|+||+++++.|+++|++|++++|+........+.+.+.. ...++.++.+|++|++++.++++.
T Consensus 4 m~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~~~D~~~~~~v~~~~~~~ 80 (267)
T 2gdz_A 4 MVNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQF---EPQKTLFIQCDVADQQQLRDTFRKV 80 (267)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTS---CGGGEEEEECCTTSHHHHHHHHHHH
T ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhc---CCCceEEEecCCCCHHHHHHHHHHH
Confidence 5667899999999999999999999999999999997544333333332211 124688999999999999988874
Q ss_pred ----CCCCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHH----HcC---CCEEEEeccccccCCCCCCCccCCC
Q 019795 80 ----QKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMA----KYN---CKKLVFSSSATIYGQPEKIPCVEDF 148 (335)
Q Consensus 80 ----~~~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~---~~~~v~~Ss~~vyg~~~~~~~~e~~ 148 (335)
.++|+|||+||... .++++..+++|+.++..+++.+. +.+ .++||++||...+.
T Consensus 81 ~~~~g~id~lv~~Ag~~~----~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~----------- 145 (267)
T 2gdz_A 81 VDHFGRLDILVNNAGVNN----EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLM----------- 145 (267)
T ss_dssp HHHHSCCCEEEECCCCCC----SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTS-----------
T ss_pred HHHcCCCCEEEECCCCCC----hhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccccC-----------
Confidence 36899999999742 45678899999998777766543 332 46899999987763
Q ss_pred CCCCCChhHHhHHHHHHHHHHHH--hh--CCCCeEEEEecccccCC
Q 019795 149 PYGAMNPYGRTKQWCEEIAFDVQ--KA--DPEWRIILLRYFNPVGA 190 (335)
Q Consensus 149 ~~~~~~~Y~~sK~~~E~~~~~~~--~~--~~~~~~~~lR~~~v~G~ 190 (335)
+..+...|+.||...+.+++.++ .+ ..++++.+++|+.+.++
T Consensus 146 ~~~~~~~Y~~sK~a~~~~~~~~ala~e~~~~gi~v~~v~Pg~v~t~ 191 (267)
T 2gdz_A 146 PVAQQPVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTA 191 (267)
T ss_dssp CCTTCHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSH
T ss_pred CCCCCchHHHHHHHHHHHHHHHHHHHHhccCCcEEEEEecCcCcch
Confidence 22334579999999999988642 22 23899999999988765
|
| >1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=6.2e-22 Score=174.27 Aligned_cols=174 Identities=18% Similarity=0.115 Sum_probs=135.9
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCc-hhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc-
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSV-PEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~- 79 (335)
+++|++|||||+|+||+++++.|+++|++|++++|+.... ....+.+... ..++.++.+|++|.+++.++++.
T Consensus 27 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~ 101 (283)
T 1g0o_A 27 LEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKN-----GSDAACVKANVGVVEDIVRMFEEA 101 (283)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT-----TCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHh-----CCCeEEEEcCCCCHHHHHHHHHHH
Confidence 4578999999999999999999999999999999875432 2222223221 14688899999999998887764
Q ss_pred ----CCCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHHHHc--CCCEEEEeccccccCCCCCCCccCCCC
Q 019795 80 ----QKFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAMAKY--NCKKLVFSSSATIYGQPEKIPCVEDFP 149 (335)
Q Consensus 80 ----~~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~ 149 (335)
.++|+|||+||.... ..+.++++..+++|+.++.++++++... +.++||++||...+.. .
T Consensus 102 ~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~----------~ 171 (283)
T 1g0o_A 102 VKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQAK----------A 171 (283)
T ss_dssp HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTCS----------S
T ss_pred HHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEechhhccC----------C
Confidence 379999999997432 2245667789999999999999998875 5579999999765421 1
Q ss_pred CCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 150 YGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 150 ~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
..+...|+.||...+.+++.++.+. .++++.+++|+.|.++
T Consensus 172 ~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~ 214 (283)
T 1g0o_A 172 VPKHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTD 214 (283)
T ss_dssp CSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSH
T ss_pred CCCCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccch
Confidence 1135689999999999999887663 2899999999999775
|
| >2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.88 E-value=1.2e-21 Score=175.93 Aligned_cols=174 Identities=16% Similarity=0.062 Sum_probs=134.9
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEe-cCCCCchhhHHhhhhhcCCccccceeEEEccCCCHH---------
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLID-NLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKD--------- 71 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~-r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~--------- 71 (335)
+++|+||||||+|+||+++++.|+++|++|++++ |+........+.+....+ .++.++.+|++|.+
T Consensus 44 l~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l~~~~~----~~~~~~~~Dl~d~~~~~~~~~~~ 119 (328)
T 2qhx_A 44 PTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRP----NSAITVQADLSNVATAPVSGADG 119 (328)
T ss_dssp -CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHST----TCEEEEECCCSSSCBCC------
T ss_pred cCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcC----CeEEEEEeeCCCchhcccccccc
Confidence 5678999999999999999999999999999999 865444444443331111 56889999999988
Q ss_pred --------HHHHHHhc-----CCCCEEEEcccccch----hhh--------------hcChHHHHHHhHHHHHHHHHHHH
Q 019795 72 --------DLDKLFSS-----QKFEAVIHFGALKAV----AES--------------VQHPFRYFDNNLIGTINLYQAMA 120 (335)
Q Consensus 72 --------~~~~~~~~-----~~~d~vi~~a~~~~~----~~~--------------~~~~~~~~~~nv~~~~~l~~~~~ 120 (335)
++.++++. .++|+|||+||.... ..+ .++++.++++|+.++.++++++.
T Consensus 120 ~~~~~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~ 199 (328)
T 2qhx_A 120 SAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFA 199 (328)
T ss_dssp -CCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-------------CHHHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred ccccccHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888764 379999999997422 112 45566889999999999999865
Q ss_pred H----cC------CCEEEEeccccccCCCCCCCccCCCCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEeccccc
Q 019795 121 K----YN------CKKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPV 188 (335)
Q Consensus 121 ~----~~------~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~ 188 (335)
. .+ .++||++||...+. +..+...|+.+|...+.+++.++.+. .++++.+++|+.|.
T Consensus 200 ~~m~~~~~~~~~~~g~IV~isS~~~~~-----------~~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~ 268 (328)
T 2qhx_A 200 HRVAGTPAKHRGTNYSIINMVDAMTNQ-----------PLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSV 268 (328)
T ss_dssp HHHHHSCGGGSCSCEEEEEECCTTTTS-----------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBS
T ss_pred HHHHhcCCcCCCCCcEEEEECchhhcc-----------CCCCcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCccc
Confidence 3 34 56999999977652 23345689999999999999888764 27999999999987
Q ss_pred CC
Q 019795 189 GA 190 (335)
Q Consensus 189 G~ 190 (335)
.+
T Consensus 269 T~ 270 (328)
T 2qhx_A 269 LV 270 (328)
T ss_dssp CC
T ss_pred CC
Confidence 76
|
| >3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.88 E-value=4.4e-22 Score=171.63 Aligned_cols=173 Identities=18% Similarity=0.167 Sum_probs=136.0
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccC--CCHHHHHHHHhc
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDL--RNKDDLDKLFSS 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl--~d~~~~~~~~~~ 79 (335)
+++|++|||||+|+||+++++.|+++|++|++++|+........+.+..... ....++.+|+ +|.+++.++++.
T Consensus 12 l~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~----~~~~~~~~d~d~~~~~~~~~~~~~ 87 (247)
T 3i1j_A 12 LKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQ----PQPLIIALNLENATAQQYRELAAR 87 (247)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTS----CCCEEEECCTTTCCHHHHHHHHHH
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCC----CCceEEEeccccCCHHHHHHHHHH
Confidence 5679999999999999999999999999999999986665555555544322 4567777777 899888887764
Q ss_pred -----CCCCEEEEcccccc-----hhhhhcChHHHHHHhHHHHHHHHHHHH----HcCCCEEEEeccccccCCCCCCCcc
Q 019795 80 -----QKFEAVIHFGALKA-----VAESVQHPFRYFDNNLIGTINLYQAMA----KYNCKKLVFSSSATIYGQPEKIPCV 145 (335)
Q Consensus 80 -----~~~d~vi~~a~~~~-----~~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~v~~Ss~~vyg~~~~~~~~ 145 (335)
.++|++||+||... ...+.++++..+++|+.++.++++++. +.+.+++|++||...+.
T Consensus 88 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~-------- 159 (247)
T 3i1j_A 88 VEHEFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSEDASIAFTSSSVGRK-------- 159 (247)
T ss_dssp HHHHHSCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSEEEEEECCGGGTS--------
T ss_pred HHHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCeEEEEcchhhcC--------
Confidence 38999999999742 122456777899999999999999974 33456899999976542
Q ss_pred CCCCCCCCChhHHhHHHHHHHHHHHHhhC---CCCeEEEEecccccC
Q 019795 146 EDFPYGAMNPYGRTKQWCEEIAFDVQKAD---PEWRIILLRYFNPVG 189 (335)
Q Consensus 146 e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~~lR~~~v~G 189 (335)
+..+...|+.+|...+.+++.++.+. .++++.+++|+.+..
T Consensus 160 ---~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~i~v~~v~PG~v~t 203 (247)
T 3i1j_A 160 ---GRANWGAYGVSKFATEGLMQTLADELEGVTAVRANSINPGATRT 203 (247)
T ss_dssp ---CCTTCHHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEECCCCSS
T ss_pred ---CCCCcchhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccC
Confidence 33445689999999999999988774 378899999987744
|
| >2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.88 E-value=5.4e-22 Score=173.92 Aligned_cols=172 Identities=15% Similarity=0.149 Sum_probs=133.6
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
+++|++|||||+|+||++++++|+++|++|++++|+........+.+.. . .++.++.+|++|+++++++++.
T Consensus 27 l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~-----~-~~~~~~~~Dv~d~~~v~~~~~~~~ 100 (276)
T 2b4q_A 27 LAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSA-----Y-GDCQAIPADLSSEAGARRLAQALG 100 (276)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTT-----S-SCEEECCCCTTSHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-----c-CceEEEEeeCCCHHHHHHHHHHHH
Confidence 4568999999999999999999999999999999875443333333321 1 2678889999999999888874
Q ss_pred ---CCCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHHH----HcCC----CEEEEeccccccCCCCCCCc
Q 019795 80 ---QKFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAMA----KYNC----KKLVFSSSATIYGQPEKIPC 144 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~----~~~v~~Ss~~vyg~~~~~~~ 144 (335)
.++|+|||+||.... ..+.++++..+++|+.++.++++++. +.+. ++||++||...+..
T Consensus 101 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~g~iV~isS~~~~~~------ 174 (276)
T 2b4q_A 101 ELSARLDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGISA------ 174 (276)
T ss_dssp HHCSCCSEEEECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSSCEEEEEECCGGGTCC------
T ss_pred HhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCEEEEECCHHHcCC------
Confidence 379999999997432 22345677899999999999888764 3343 79999999876532
Q ss_pred cCCCCCCCCC-hhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 145 VEDFPYGAMN-PYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 145 ~e~~~~~~~~-~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
..... .|+.||...+.+++.++.+. .++++.+++|+.+..+
T Consensus 175 -----~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~vn~v~PG~v~T~ 218 (276)
T 2b4q_A 175 -----MGEQAYAYGPSKAALHQLSRMLAKELVGEHINVNVIAPGRFPSR 218 (276)
T ss_dssp -----CCCSCTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCST
T ss_pred -----CCCCccccHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcCc
Confidence 12234 79999999999999888763 2799999999998775
|
| >2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.88 E-value=1e-21 Score=171.66 Aligned_cols=169 Identities=15% Similarity=0.200 Sum_probs=132.3
Q ss_pred CeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcC----
Q 019795 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQ---- 80 (335)
Q Consensus 5 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~---- 80 (335)
|++|||||+|+||++++++|+++|++|++++|+........+.+... .++.++.+|++|++++.++++..
T Consensus 22 k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~------~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 95 (272)
T 2nwq_A 22 STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAK------TRVLPLTLDVRDRAAMSAAVDNLPEEF 95 (272)
T ss_dssp CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTT------SCEEEEECCTTCHHHHHHHHHTCCGGG
T ss_pred cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcC------CcEEEEEcCCCCHHHHHHHHHHHHHHh
Confidence 89999999999999999999999999999999754433333332210 36889999999999999998852
Q ss_pred -CCCEEEEcccccch-----hhhhcChHHHHHHhHHHHHHHHHHHH----HcCCC-EEEEeccccccCCCCCCCccCCCC
Q 019795 81 -KFEAVIHFGALKAV-----AESVQHPFRYFDNNLIGTINLYQAMA----KYNCK-KLVFSSSATIYGQPEKIPCVEDFP 149 (335)
Q Consensus 81 -~~d~vi~~a~~~~~-----~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~-~~v~~Ss~~vyg~~~~~~~~e~~~ 149 (335)
++|++||+||.... ..+.++++.++++|+.++.++++++. +.+.+ +||++||...+. +
T Consensus 96 g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~~IV~isS~~~~~-----------~ 164 (272)
T 2nwq_A 96 ATLRGLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGSVAGKW-----------P 164 (272)
T ss_dssp SSCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGTS-----------C
T ss_pred CCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeCCchhcc-----------C
Confidence 68999999997421 22345677899999999998888754 44566 999999977652 2
Q ss_pred CCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 150 YGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 150 ~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
..+...|+.+|...+.+++.++.+. .++++.+++|+.+..+
T Consensus 165 ~~~~~~Y~asKaa~~~l~~~la~el~~~gIrvn~v~PG~v~T~ 207 (272)
T 2nwq_A 165 YPGSHVYGGTKAFVEQFSLNLRCDLQGTGVRVTNLEPGLCESE 207 (272)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHHTTCTTSCCEEEEEEECSBC--
T ss_pred CCCCchHHHHHHHHHHHHHHHHHHhCccCeEEEEEEcCCCcCc
Confidence 3345689999999999999988764 2799999999988765
|
| >3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A | Back alignment and structure |
|---|
Probab=99.88 E-value=9.6e-22 Score=171.85 Aligned_cols=174 Identities=20% Similarity=0.157 Sum_probs=136.5
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCC-chhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc-
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNS-VPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~- 79 (335)
+++|++|||||+|+||++++++|+++|++|++++++... .....+.+... ..++.++.+|++|++++.++++.
T Consensus 16 l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~ 90 (270)
T 3is3_A 16 LDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKAL-----GSDAIAIKADIRQVPEIVKLFDQA 90 (270)
T ss_dssp CTTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT-----TCCEEEEECCTTSHHHHHHHHHHH
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc-----CCcEEEEEcCCCCHHHHHHHHHHH
Confidence 457899999999999999999999999999998775432 22223333322 25788999999999999988875
Q ss_pred ----CCCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHHHHcC--CCEEEEeccccccCCCCCCCccCCCC
Q 019795 80 ----QKFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAMAKYN--CKKLVFSSSATIYGQPEKIPCVEDFP 149 (335)
Q Consensus 80 ----~~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~~~--~~~~v~~Ss~~vyg~~~~~~~~e~~~ 149 (335)
.++|++||+||.... ..+.++++..+++|+.++.++++++...- .++||++||..... .+
T Consensus 91 ~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~----------~~ 160 (270)
T 3is3_A 91 VAHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSNTSKD----------FS 160 (270)
T ss_dssp HHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCTTTTT----------CC
T ss_pred HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCchhcc----------CC
Confidence 389999999997432 22456778899999999999999987753 24999999965210 13
Q ss_pred CCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 150 YGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 150 ~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
..+...|+.||...+.+++.++.++ .++++.+++|+.|..+
T Consensus 161 ~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~ 203 (270)
T 3is3_A 161 VPKHSLYSGSKGAVDSFVRIFSKDCGDKKITVNAVAPGGTVTD 203 (270)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCST
T ss_pred CCCCchhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccCh
Confidence 3455689999999999999888773 2799999999999776
|
| >4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1} | Back alignment and structure |
|---|
Probab=99.88 E-value=1.9e-21 Score=165.27 Aligned_cols=168 Identities=15% Similarity=0.114 Sum_probs=135.6
Q ss_pred CCCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc-
Q 019795 1 MASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS- 79 (335)
Q Consensus 1 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~- 79 (335)
|+++|++|||||+++||+++++.|+++|++|++++|+........ ..++..+.+|++|++++++++++
T Consensus 8 lf~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~~~-----------~~~~~~~~~Dv~~~~~v~~~~~~~ 76 (242)
T 4b79_A 8 IYAGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHAPR-----------HPRIRREELDITDSQRLQRLFEAL 76 (242)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTSCC-----------CTTEEEEECCTTCHHHHHHHHHHC
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhhhh-----------cCCeEEEEecCCCHHHHHHHHHhc
Confidence 467899999999999999999999999999999999765543211 25788999999999999999986
Q ss_pred CCCCEEEEcccccc--hhhhhcChHHHHHHhHHHHHHHHHHHHHc---CCCEEEEeccccccCCCCCCCccCCCCCCCCC
Q 019795 80 QKFEAVIHFGALKA--VAESVQHPFRYFDNNLIGTINLYQAMAKY---NCKKLVFSSSATIYGQPEKIPCVEDFPYGAMN 154 (335)
Q Consensus 80 ~~~d~vi~~a~~~~--~~~~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~ 154 (335)
.++|++|||||+.. ...+.++++.++++|+.++..+++++... +-.+||++||....- +.....
T Consensus 77 g~iDiLVNNAGi~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~~~-----------~~~~~~ 145 (242)
T 4b79_A 77 PRLDVLVNNAGISRDREEYDLATFERVLRLNLSAAMLASQLARPLLAQRGGSILNIASMYSTF-----------GSADRP 145 (242)
T ss_dssp SCCSEEEECCCCCCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCEEEEEECCGGGTS-----------CCSSCH
T ss_pred CCCCEEEECCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeeccccC-----------CCCCCH
Confidence 48999999999743 23345678899999999999999986432 226999999976431 223345
Q ss_pred hhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 155 PYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 155 ~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
.|+.||.....+.+.++.++ .++++.++.|+.|--+
T Consensus 146 ~Y~asKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~ 183 (242)
T 4b79_A 146 AYSASKGAIVQLTRSLACEYAAERIRVNAIAPGWIDTP 183 (242)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCC
T ss_pred HHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCCCh
Confidence 79999999999999888774 2789999999988655
|
| >1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.88 E-value=9.3e-22 Score=169.86 Aligned_cols=162 Identities=15% Similarity=0.097 Sum_probs=124.9
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcC-
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQ- 80 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~- 80 (335)
+++|+||||||+|+||++++++|+++|++|++++|+. +..+.+ ..+.++ +|+ .++++++++..
T Consensus 17 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~----~~~~~~---------~~~~~~-~D~--~~~~~~~~~~~~ 80 (249)
T 1o5i_A 17 IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNE----ELLKRS---------GHRYVV-CDL--RKDLDLLFEKVK 80 (249)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCH----HHHHHT---------CSEEEE-CCT--TTCHHHHHHHSC
T ss_pred cCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCH----HHHHhh---------CCeEEE-eeH--HHHHHHHHHHhc
Confidence 5689999999999999999999999999999999864 111111 245666 999 44555555543
Q ss_pred CCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHH----HHcCCCEEEEeccccccCCCCCCCccCCCCCCC
Q 019795 81 KFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAM----AKYNCKKLVFSSSATIYGQPEKIPCVEDFPYGA 152 (335)
Q Consensus 81 ~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~ 152 (335)
++|+|||+||.... ..+.++++..+++|+.++.++++++ ++.+.++||++||...+. +..+
T Consensus 81 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~~ 149 (249)
T 1o5i_A 81 EVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVIS-----------PIEN 149 (249)
T ss_dssp CCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS-----------CCTT
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchHhcC-----------CCCC
Confidence 79999999997432 2234567789999999988877664 455668999999988763 2234
Q ss_pred CChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 153 MNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 153 ~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
...|+.+|...+.+++.++.+. .++++.+++|+.++++
T Consensus 150 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~ 189 (249)
T 1o5i_A 150 LYTSNSARMALTGFLKTLSFEVAPYGITVNCVAPGWTETE 189 (249)
T ss_dssp BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCT
T ss_pred CchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCccC
Confidence 5689999999999999887662 2899999999999887
|
| >4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.88 E-value=5.2e-22 Score=174.42 Aligned_cols=173 Identities=17% Similarity=0.191 Sum_probs=134.9
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc---
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS--- 79 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~--- 79 (335)
++|++|||||+|+||+++++.|+++|++|++++|+........+.+..... ..+.++.+|++|+++++++++.
T Consensus 32 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~----~~~~~~~~Dv~d~~~v~~~~~~~~~ 107 (281)
T 4dry_A 32 EGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTG----NIVRAVVCDVGDPDQVAALFAAVRA 107 (281)
T ss_dssp --CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHS----SCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC----CeEEEEEcCCCCHHHHHHHHHHHHH
Confidence 568999999999999999999999999999999976655555554443322 3358899999999999888875
Q ss_pred --CCCCEEEEcccccch-----hhhhcChHHHHHHhHHHHHHHHHHHHH----cC--CCEEEEeccccccCCCCCCCccC
Q 019795 80 --QKFEAVIHFGALKAV-----AESVQHPFRYFDNNLIGTINLYQAMAK----YN--CKKLVFSSSATIYGQPEKIPCVE 146 (335)
Q Consensus 80 --~~~d~vi~~a~~~~~-----~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~--~~~~v~~Ss~~vyg~~~~~~~~e 146 (335)
.++|++||+||.... ..+.++++.++++|+.++.++++++.. .+ .++||++||...+.
T Consensus 108 ~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~--------- 178 (281)
T 4dry_A 108 EFARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQT--------- 178 (281)
T ss_dssp HHSCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCGGGTC---------
T ss_pred HcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECCHHhCC---------
Confidence 379999999997422 234567778999999999999888643 22 36899999976541
Q ss_pred CCCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 147 DFPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 147 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
+..+...|+.||...+.+++.++.++ .++++.+++|+.|..+
T Consensus 179 --~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~ 222 (281)
T 4dry_A 179 --PRPNSAPYTATKHAITGLTKSTALDGRMHDIACGQIDIGNAATD 222 (281)
T ss_dssp --CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEECBCC-
T ss_pred --CCCCChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcCcCh
Confidence 33455689999999999999888763 2799999999988654
|
| >4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=99.88 E-value=5.5e-22 Score=173.42 Aligned_cols=170 Identities=17% Similarity=0.196 Sum_probs=132.9
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
+++|++|||||+|+||++++++|+++|++|++++|+.....+..+.+ + .++.++.+|++|++++.++++.
T Consensus 26 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~----~----~~~~~~~~Dv~d~~~v~~~~~~~~ 97 (272)
T 4dyv_A 26 TGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEI----G----DDALCVPTDVTDPDSVRALFTATV 97 (272)
T ss_dssp --CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH----T----SCCEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh----C----CCeEEEEecCCCHHHHHHHHHHHH
Confidence 35689999999999999999999999999999999754433333322 1 5788999999999999988875
Q ss_pred ---CCCCEEEEcccccch-----hhhhcChHHHHHHhHHHHHHHHHHHHH----cC--CCEEEEeccccccCCCCCCCcc
Q 019795 80 ---QKFEAVIHFGALKAV-----AESVQHPFRYFDNNLIGTINLYQAMAK----YN--CKKLVFSSSATIYGQPEKIPCV 145 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~~-----~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~--~~~~v~~Ss~~vyg~~~~~~~~ 145 (335)
.++|++||+||.... ..+.++++..+++|+.++.++++++.. .+ .++||++||...+.
T Consensus 98 ~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~-------- 169 (272)
T 4dyv_A 98 EKFGRVDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISATS-------- 169 (272)
T ss_dssp HHHSCCCEEEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSSTTS--------
T ss_pred HHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhhcC--------
Confidence 389999999997422 224566778999999999999998654 22 35899999977652
Q ss_pred CCCCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 146 EDFPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 146 e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
+..+...|+.||...+.+++.++.++ .++++.+++|+.|..+
T Consensus 170 ---~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~ 213 (272)
T 4dyv_A 170 ---PRPYSAPYTATKHAITGLTKSTSLDGRVHDIACGQIDIGNADTP 213 (272)
T ss_dssp ---CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEEECC--
T ss_pred ---CCCCchHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEECcccCh
Confidence 33455689999999999999888763 2789999999988765
|
| >2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... | Back alignment and structure |
|---|
Probab=99.88 E-value=8.3e-22 Score=173.89 Aligned_cols=174 Identities=17% Similarity=0.123 Sum_probs=135.2
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCC-CCchhhHHhhhhhcCCccccceeEEEccCCC----HHHHHHH
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLH-NSVPEAVDRVKDLAGPELAKKLEFHVGDLRN----KDDLDKL 76 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d----~~~~~~~ 76 (335)
+++|++|||||+|+||++++++|+++|++|++++|+. .......+.+....+ ..+.++.+|++| ++++.++
T Consensus 21 l~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~----~~~~~~~~Dv~~~~~~~~~v~~~ 96 (288)
T 2x9g_A 21 MEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERS----NTAVVCQADLTNSNVLPASCEEI 96 (288)
T ss_dssp -CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHST----TCEEEEECCCSCSTTHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhcC----CceEEEEeecCCccCCHHHHHHH
Confidence 4578999999999999999999999999999999976 443333333331111 568899999999 8888887
Q ss_pred Hhc-----CCCCEEEEcccccc---------hh-----hhhcChHHHHHHhHHHHHHHHHHHHHc----C------CCEE
Q 019795 77 FSS-----QKFEAVIHFGALKA---------VA-----ESVQHPFRYFDNNLIGTINLYQAMAKY----N------CKKL 127 (335)
Q Consensus 77 ~~~-----~~~d~vi~~a~~~~---------~~-----~~~~~~~~~~~~nv~~~~~l~~~~~~~----~------~~~~ 127 (335)
++. .++|+|||+||... .. .+.++++..+++|+.++.++++++... + ..+|
T Consensus 97 ~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~i 176 (288)
T 2x9g_A 97 INSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSI 176 (288)
T ss_dssp HHHHHHHHSCCCEEEECCCCCCCCCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC--------CCCEEE
T ss_pred HHHHHHhcCCCCEEEECCCCCCCCccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCCCCCeEE
Confidence 764 37999999999742 12 334566789999999999999987643 2 3589
Q ss_pred EEeccccccCCCCCCCccCCCCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 128 VFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 128 v~~Ss~~vyg~~~~~~~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
|++||...+. +..+...|+.||...+.+++.++.+. .++++.+++|+.|+++
T Consensus 177 v~isS~~~~~-----------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~ 230 (288)
T 2x9g_A 177 VNLCDAMVDQ-----------PCMAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLP 230 (288)
T ss_dssp EEECCTTTTS-----------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSCSCC
T ss_pred EEEecccccC-----------CCCCCchHHHHHHHHHHHHHHHHHHhhccCeEEEEEEeccccCc
Confidence 9999977652 23445689999999999999887763 2799999999999887
|
| >3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.88 E-value=8.2e-22 Score=173.63 Aligned_cols=174 Identities=18% Similarity=0.183 Sum_probs=140.0
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCC---eEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGF---KVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS 79 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~ 79 (335)
++|++|||||+|+||+++++.|+++|+ +|++++|+........+.+..... ..++.++.+|++|+++++++++.
T Consensus 32 ~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~ 108 (287)
T 3rku_A 32 AKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFP---NAKVHVAQLDITQAEKIKPFIEN 108 (287)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCT---TCEEEEEECCTTCGGGHHHHHHT
T ss_pred CCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCC---CCeEEEEECCCCCHHHHHHHHHH
Confidence 578999999999999999999999987 999999976655555555443211 25788999999999999999986
Q ss_pred C-----CCCEEEEcccccc-----hhhhhcChHHHHHHhHHHHHHHHHHHH----HcCCCEEEEeccccccCCCCCCCcc
Q 019795 80 Q-----KFEAVIHFGALKA-----VAESVQHPFRYFDNNLIGTINLYQAMA----KYNCKKLVFSSSATIYGQPEKIPCV 145 (335)
Q Consensus 80 ~-----~~d~vi~~a~~~~-----~~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~v~~Ss~~vyg~~~~~~~~ 145 (335)
. ++|++||+||... ...+.++++..+++|+.|+.++++++. +.+.++||++||...+.
T Consensus 109 ~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~-------- 180 (287)
T 3rku_A 109 LPQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKNSGDIVNLGSIAGRD-------- 180 (287)
T ss_dssp SCGGGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTS--------
T ss_pred HHHhcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEECChhhcC--------
Confidence 3 7999999999643 122456678899999999999999873 44567999999977652
Q ss_pred CCCCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 146 EDFPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 146 e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
+..+...|+.||...+.+++.++.+. .++++.+++|+.|..+
T Consensus 181 ---~~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~ 224 (287)
T 3rku_A 181 ---AYPTGSIYCASKFAVGAFTDSLRKELINTKIRVILIAPGLVETE 224 (287)
T ss_dssp ---CCTTCHHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEESCEESS
T ss_pred ---CCCCCchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEeCCcCcCc
Confidence 33445689999999999999998884 3899999999988765
|
| >3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.88 E-value=1e-21 Score=174.14 Aligned_cols=173 Identities=18% Similarity=0.148 Sum_probs=135.6
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCC---------c---hhhHHhhhhhcCCccccceeEEEccCCC
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNS---------V---PEAVDRVKDLAGPELAKKLEFHVGDLRN 69 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~---------~---~~~~~~~~~~~~~~~~~~i~~~~~Dl~d 69 (335)
+++|++|||||+|+||+++++.|+++|++|++++|++.. . ....+.+... ..++.++.+|++|
T Consensus 26 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~Dv~~ 100 (299)
T 3t7c_A 26 VEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEAL-----GRRIIASQVDVRD 100 (299)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHT-----TCCEEEEECCTTC
T ss_pred cCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhc-----CCceEEEECCCCC
Confidence 456899999999999999999999999999999987331 1 1111222211 2578999999999
Q ss_pred HHHHHHHHhc-----CCCCEEEEcccccch-----hhhhcChHHHHHHhHHHHHHHHHHHHHc-----CCCEEEEecccc
Q 019795 70 KDDLDKLFSS-----QKFEAVIHFGALKAV-----AESVQHPFRYFDNNLIGTINLYQAMAKY-----NCKKLVFSSSAT 134 (335)
Q Consensus 70 ~~~~~~~~~~-----~~~d~vi~~a~~~~~-----~~~~~~~~~~~~~nv~~~~~l~~~~~~~-----~~~~~v~~Ss~~ 134 (335)
++++.++++. .++|++||+||.... ..+.++++..+++|+.++.++++++... +.++||++||..
T Consensus 101 ~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~Iv~isS~~ 180 (299)
T 3t7c_A 101 FDAMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIG 180 (299)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSCEEEEEECCGG
T ss_pred HHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChh
Confidence 9999988874 489999999997432 2245677889999999999999986542 246899999977
Q ss_pred ccCCCCCCCccCCCCCCCCChhHHhHHHHHHHHHHHHhhCC--CCeEEEEecccccCC
Q 019795 135 IYGQPEKIPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKADP--EWRIILLRYFNPVGA 190 (335)
Q Consensus 135 vyg~~~~~~~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~--~~~~~~lR~~~v~G~ 190 (335)
.+. +......|+.||...+.+++.++.++. ++++.+++|+.|..+
T Consensus 181 ~~~-----------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~ 227 (299)
T 3t7c_A 181 GLR-----------GAENIGNYIASKHGLHGLMRTMALELGPRNIRVNIVCPSSVATP 227 (299)
T ss_dssp GTS-----------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSST
T ss_pred hcc-----------CCCCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCccCc
Confidence 652 233456899999999999998887742 799999999999876
|
| >3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.88 E-value=4.6e-22 Score=171.88 Aligned_cols=176 Identities=15% Similarity=0.116 Sum_probs=135.1
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
+++|++|||||+|+||+++++.|+++|++|++++|+........+.+..... ....+.++.+|++|++++.++++.
T Consensus 5 ~~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~~Dv~~~~~v~~~~~~~~ 82 (250)
T 3nyw_A 5 KQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNK--HVQEPIVLPLDITDCTKADTEIKDIH 82 (250)
T ss_dssp CCCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCT--TSCCCEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcc--ccCcceEEeccCCCHHHHHHHHHHHH
Confidence 3578999999999999999999999999999999986655555555543311 114678999999999999888875
Q ss_pred ---CCCCEEEEcccccc---hhhhhcChHHHHHHhHHHHHHHHHHHH----HcCCCEEEEeccccccCCCCCCCccCCCC
Q 019795 80 ---QKFEAVIHFGALKA---VAESVQHPFRYFDNNLIGTINLYQAMA----KYNCKKLVFSSSATIYGQPEKIPCVEDFP 149 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~---~~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~ 149 (335)
.++|++||+||... ...+.++++..+++|+.++.++++++. +.+.++||++||...+. +
T Consensus 83 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~-----------~ 151 (250)
T 3nyw_A 83 QKYGAVDILVNAAAMFMDGSLSEPVDNFRKIMEINVIAQYGILKTVTEIMKVQKNGYIFNVASRAAKY-----------G 151 (250)
T ss_dssp HHHCCEEEEEECCCCCCCCCCSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC-----------------
T ss_pred HhcCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEccHHhcC-----------C
Confidence 47999999999742 223456677899999999999999864 34557999999966541 2
Q ss_pred CCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 150 YGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 150 ~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
..+...|+.||...+.+++.++.++ .++++.+++|+.|..+
T Consensus 152 ~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~ 194 (250)
T 3nyw_A 152 FADGGIYGSTKFALLGLAESLYRELAPLGIRVTTLCPGWVNTD 194 (250)
T ss_dssp -CCTTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSH
T ss_pred CCCCcchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCc
Confidence 2335689999999999999888774 2789999999887543
|
| >3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=99.88 E-value=1.2e-21 Score=167.12 Aligned_cols=168 Identities=16% Similarity=0.177 Sum_probs=131.1
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcC--C
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQ--K 81 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~--~ 81 (335)
||+||||||+|+||++++++|+++|++|++++|+........+.+ ..++.++.+|++|.++++++++.. .
T Consensus 1 Mk~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~--------~~~~~~~~~D~~~~~~v~~~~~~~~~~ 72 (230)
T 3guy_A 1 MSLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCL--------SNNVGYRARDLASHQEVEQLFEQLDSI 72 (230)
T ss_dssp --CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTC--------SSCCCEEECCTTCHHHHHHHHHSCSSC
T ss_pred CCEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH--------hhccCeEeecCCCHHHHHHHHHHHhhc
Confidence 579999999999999999999999999999999754433333222 257889999999999999999853 3
Q ss_pred CCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHHHHc---CCCEEEEeccccccCCCCCCCccCCCCCCCCC
Q 019795 82 FEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAMAKY---NCKKLVFSSSATIYGQPEKIPCVEDFPYGAMN 154 (335)
Q Consensus 82 ~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~ 154 (335)
+|+|||+||.... ..+.++++..+++|+.++.++++++... ...++|++||...+. +..+..
T Consensus 73 ~d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~-----------~~~~~~ 141 (230)
T 3guy_A 73 PSTVVHSAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQPVNVVMIMSTAAQQ-----------PKAQES 141 (230)
T ss_dssp CSEEEECCCCCCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCEEEEECCGGGTS-----------CCTTCH
T ss_pred CCEEEEeCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeecccCC-----------CCCCCc
Confidence 5999999997432 2245667789999999999999997654 123899999977652 334456
Q ss_pred hhHHhHHHHHHHHHHHHhhCC--CCeEEEEecccccCC
Q 019795 155 PYGRTKQWCEEIAFDVQKADP--EWRIILLRYFNPVGA 190 (335)
Q Consensus 155 ~Y~~sK~~~E~~~~~~~~~~~--~~~~~~lR~~~v~G~ 190 (335)
.|+.||...+.+++.++.+.. ++++.+++|+.+..+
T Consensus 142 ~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~ 179 (230)
T 3guy_A 142 TYCAVKWAVKGLIESVRLELKGKPMKIIAVYPGGMATE 179 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEECCC---
T ss_pred hhHHHHHHHHHHHHHHHHHHHhcCeEEEEEECCcccCh
Confidence 899999999999999988853 789999999887554
|
| >3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} | Back alignment and structure |
|---|
Probab=99.88 E-value=4.3e-22 Score=178.11 Aligned_cols=174 Identities=17% Similarity=0.121 Sum_probs=133.5
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc---
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS--- 79 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~--- 79 (335)
++|+||||||+|+||++++++|+++|++|++++|+..+.....+.+..... ...+.++.+|++|++++.++++.
T Consensus 7 ~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~ 83 (319)
T 3ioy_A 7 AGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGS---GPEVMGVQLDVASREGFKMAADEVEA 83 (319)
T ss_dssp TTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTC---GGGEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC---CCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 457999999999999999999999999999999986655555554443211 13789999999999999988874
Q ss_pred --CCCCEEEEcccccc----hhhhhcChHHHHHHhHHHHHHHHHHHHHc----------CCCEEEEeccccccCCCCCCC
Q 019795 80 --QKFEAVIHFGALKA----VAESVQHPFRYFDNNLIGTINLYQAMAKY----------NCKKLVFSSSATIYGQPEKIP 143 (335)
Q Consensus 80 --~~~d~vi~~a~~~~----~~~~~~~~~~~~~~nv~~~~~l~~~~~~~----------~~~~~v~~Ss~~vyg~~~~~~ 143 (335)
.++|+|||+||... ...+.++++.++++|+.|+.++++++... +.++||++||...+.
T Consensus 84 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~~~------ 157 (319)
T 3ioy_A 84 RFGPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFL------ 157 (319)
T ss_dssp HTCCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGGTC------
T ss_pred hCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEeccccccc------
Confidence 37899999999742 22244667789999999999999986542 245899999977653
Q ss_pred ccCCCCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 144 CVEDFPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 144 ~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
+......|+.||.+.+.+++.++.+. .++.+.+++|+.|.++
T Consensus 158 -----~~~~~~~Y~aSKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~ 201 (319)
T 3ioy_A 158 -----AAGSPGIYNTTKFAVRGLSESLHYSLLKYEIGVSVLCPGLVKSY 201 (319)
T ss_dssp -----CCSSSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCBC--
T ss_pred -----CCCCCHHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEcCeEccC
Confidence 22334679999997777776665442 2799999999999776
|
| >3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.87 E-value=2.1e-21 Score=169.63 Aligned_cols=175 Identities=12% Similarity=0.111 Sum_probs=136.3
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCC-chhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc-
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNS-VPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~- 79 (335)
+++|++|||||+|+||+++++.|+++|++|++++++... .....+.+... ..++.++.+|++|++++++++++
T Consensus 29 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~-----~~~~~~~~~Dv~d~~~v~~~~~~~ 103 (271)
T 3v2g_A 29 LAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQA-----GGRAVAIRADNRDAEAIEQAIRET 103 (271)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT-----TCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc-----CCcEEEEECCCCCHHHHHHHHHHH
Confidence 457899999999999999999999999999998775432 22233333221 25788999999999999888875
Q ss_pred ----CCCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHHHHc--CCCEEEEeccccccCCCCCCCccCCCC
Q 019795 80 ----QKFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAMAKY--NCKKLVFSSSATIYGQPEKIPCVEDFP 149 (335)
Q Consensus 80 ----~~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~ 149 (335)
.++|++||+||.... ..+.++++..+++|+.++.++++++... +.++||++||....- .+
T Consensus 104 ~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS~~~~~----------~~ 173 (271)
T 3v2g_A 104 VEALGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGSNLAEL----------VP 173 (271)
T ss_dssp HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCGGGTC----------CC
T ss_pred HHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeChhhcc----------CC
Confidence 389999999997432 2245677889999999999999998765 346999999854321 12
Q ss_pred CCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCCC
Q 019795 150 YGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGAH 191 (335)
Q Consensus 150 ~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~~ 191 (335)
..+...|+.+|...+.+++.++.++ .++++.+++|+.|..+-
T Consensus 174 ~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~ 217 (271)
T 3v2g_A 174 WPGISLYSASKAALAGLTKGLARDLGPRGITVNIVHPGSTDTDM 217 (271)
T ss_dssp STTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSSS
T ss_pred CCCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCCCcCCc
Confidence 3445689999999999999888764 27999999999998863
|
| >3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.87 E-value=6.8e-22 Score=173.80 Aligned_cols=169 Identities=17% Similarity=0.188 Sum_probs=131.6
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc---
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS--- 79 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~--- 79 (335)
++|++|||||+|+||+++++.|+++|++|++++|+........+.+ +.++.++.+|++|.++++++++.
T Consensus 29 ~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~--------~~~~~~~~~Dl~~~~~v~~~~~~~~~ 100 (281)
T 3ppi_A 29 EGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADEL--------GNRAEFVSTNVTSEDSVLAAIEAANQ 100 (281)
T ss_dssp TTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH--------CTTEEEEECCTTCHHHHHHHHHHHTT
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh--------CCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 4578999999999999999999999999999999755443333322 15789999999999999988874
Q ss_pred -CCCCEEEEc-ccccch---------hhhhcChHHHHHHhHHHHHHHHHHHHHc----------CCCEEEEeccccccCC
Q 019795 80 -QKFEAVIHF-GALKAV---------AESVQHPFRYFDNNLIGTINLYQAMAKY----------NCKKLVFSSSATIYGQ 138 (335)
Q Consensus 80 -~~~d~vi~~-a~~~~~---------~~~~~~~~~~~~~nv~~~~~l~~~~~~~----------~~~~~v~~Ss~~vyg~ 138 (335)
.++|++||+ |+.... ..+.+.++..+++|+.++.++++++... +..+||++||...+.
T Consensus 101 ~~~id~lv~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~- 179 (281)
T 3ppi_A 101 LGRLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAGYE- 179 (281)
T ss_dssp SSEEEEEEECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEEECCGGGTS-
T ss_pred hCCCCeEEEccCcccccccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEEEecccccC-
Confidence 378999999 544221 1233456789999999999999986532 235899999987652
Q ss_pred CCCCCccCCCCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 139 PEKIPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 139 ~~~~~~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
+..+...|+.||.+.+.+++.++.++ .++++.+++|+.|..+
T Consensus 180 ----------~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~ 223 (281)
T 3ppi_A 180 ----------GQIGQTAYAAAKAGVIGLTIAAARDLSSAGIRVNTIAPGTMKTP 223 (281)
T ss_dssp ----------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCH
T ss_pred ----------CCCCCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCCch
Confidence 33445689999999999998888764 2789999999988664
|
| >1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... | Back alignment and structure |
|---|
Probab=99.87 E-value=7.4e-22 Score=174.03 Aligned_cols=174 Identities=16% Similarity=0.169 Sum_probs=133.8
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
+++|+||||||+|+||+++++.|+++|++|++++|+........+.+..... ..+.++.+|++|.+++.++++.
T Consensus 26 ~~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~----~~~~~~~~Dl~d~~~v~~~~~~~~ 101 (286)
T 1xu9_A 26 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGA----ASAHYIAGTMEDMTFAEQFVAQAG 101 (286)
T ss_dssp GTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTC----SEEEEEECCTTCHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCC----CceEEEeCCCCCHHHHHHHHHHHH
Confidence 5678999999999999999999999999999999976554444443333221 3688999999999998888764
Q ss_pred ---CCCCEEEEc-ccccch---hhhhcChHHHHHHhHHHHHHHHHHHHHc---CCCEEEEeccccccCCCCCCCccCCCC
Q 019795 80 ---QKFEAVIHF-GALKAV---AESVQHPFRYFDNNLIGTINLYQAMAKY---NCKKLVFSSSATIYGQPEKIPCVEDFP 149 (335)
Q Consensus 80 ---~~~d~vi~~-a~~~~~---~~~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~~v~~Ss~~vyg~~~~~~~~e~~~ 149 (335)
.++|+|||+ |+.... ..+.++++..+++|+.++.++++++... +.++||++||...+. +
T Consensus 102 ~~~g~iD~li~naag~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~-----------~ 170 (286)
T 1xu9_A 102 KLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKV-----------A 170 (286)
T ss_dssp HHHTSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGGTS-----------C
T ss_pred HHcCCCCEEEECCccCCCCccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHCCCEEEEECCccccc-----------C
Confidence 379999999 565321 1234556788999999999999987542 236999999977652 2
Q ss_pred CCCCChhHHhHHHHHHHHHHHHhhC----CCCeEEEEecccccCC
Q 019795 150 YGAMNPYGRTKQWCEEIAFDVQKAD----PEWRIILLRYFNPVGA 190 (335)
Q Consensus 150 ~~~~~~Y~~sK~~~E~~~~~~~~~~----~~~~~~~lR~~~v~G~ 190 (335)
..+...|+.||...+.+++.++.+. .++++++++|+.+..+
T Consensus 171 ~~~~~~Y~asK~a~~~~~~~l~~e~~~~~~~i~v~~v~Pg~v~t~ 215 (286)
T 1xu9_A 171 YPMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTE 215 (286)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCH
T ss_pred CCCccHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeecCccCCh
Confidence 3345689999999999998877653 3889999999887543
|
| >3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=99.87 E-value=3e-22 Score=170.10 Aligned_cols=152 Identities=16% Similarity=0.096 Sum_probs=126.5
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc-CC
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-QK 81 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-~~ 81 (335)
++|++|||||+|+||+++++.|+++|++|++++|+.. +|++|++++++++++ .+
T Consensus 5 ~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~-------------------------~D~~~~~~v~~~~~~~g~ 59 (223)
T 3uce_A 5 DKTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTG-------------------------LDISDEKSVYHYFETIGA 59 (223)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGT-------------------------CCTTCHHHHHHHHHHHCS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcc-------------------------cCCCCHHHHHHHHHHhCC
Confidence 4688999999999999999999999999999987411 799999999998875 47
Q ss_pred CCEEEEcccccc-----hhhhhcChHHHHHHhHHHHHHHHHHHHHcC--CCEEEEeccccccCCCCCCCccCCCCCCCCC
Q 019795 82 FEAVIHFGALKA-----VAESVQHPFRYFDNNLIGTINLYQAMAKYN--CKKLVFSSSATIYGQPEKIPCVEDFPYGAMN 154 (335)
Q Consensus 82 ~d~vi~~a~~~~-----~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~--~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~ 154 (335)
+|++||+||... ...+.++++..+++|+.++.++++++...- .+++|++||...+. +..+..
T Consensus 60 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~-----------~~~~~~ 128 (223)
T 3uce_A 60 FDHLIVTAGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLTSGMLSRK-----------VVANTY 128 (223)
T ss_dssp EEEEEECCCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEECCGGGTS-----------CCTTCH
T ss_pred CCEEEECCCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEecchhhcc-----------CCCCch
Confidence 999999999742 123456677899999999999999987652 24899999987653 334556
Q ss_pred hhHHhHHHHHHHHHHHHhhCCCCeEEEEecccccCC
Q 019795 155 PYGRTKQWCEEIAFDVQKADPEWRIILLRYFNPVGA 190 (335)
Q Consensus 155 ~Y~~sK~~~E~~~~~~~~~~~~~~~~~lR~~~v~G~ 190 (335)
.|+.+|...+.+++.++.++..+++.+++|+.+..+
T Consensus 129 ~Y~asK~a~~~~~~~la~e~~~i~vn~v~PG~v~t~ 164 (223)
T 3uce_A 129 VKAAINAAIEATTKVLAKELAPIRVNAISPGLTKTE 164 (223)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTSEEEEEEECSBCSG
T ss_pred HHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcch
Confidence 899999999999999998874599999999999876
|
| >3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=3.1e-21 Score=165.00 Aligned_cols=168 Identities=15% Similarity=0.146 Sum_probs=131.8
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc---
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS--- 79 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~--- 79 (335)
|+|+||||||+++||+++++.|+++|++|++++|++.... .+.+. ..++.++.+|++|++++++++++
T Consensus 1 MnK~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~----~~~~~-----~~~~~~~~~Dv~~~~~v~~~v~~~~~ 71 (247)
T 3ged_A 1 MNRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSA----DFAKE-----RPNLFYFHGDVADPLTLKKFVEYAME 71 (247)
T ss_dssp -CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH----HHHTT-----CTTEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHH----HHHHh-----cCCEEEEEecCCCHHHHHHHHHHHHH
Confidence 5799999999999999999999999999999998643322 22221 15688999999999999988775
Q ss_pred --CCCCEEEEcccccc----hhhhhcChHHHHHHhHHHHHHHHHHHHHc---CCCEEEEeccccccCCCCCCCccCCCCC
Q 019795 80 --QKFEAVIHFGALKA----VAESVQHPFRYFDNNLIGTINLYQAMAKY---NCKKLVFSSSATIYGQPEKIPCVEDFPY 150 (335)
Q Consensus 80 --~~~d~vi~~a~~~~----~~~~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~~v~~Ss~~vyg~~~~~~~~e~~~~ 150 (335)
.++|++||+||... ...+.++++.++++|+.++..+.+++... +-.++|++||...+. +.
T Consensus 72 ~~g~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~G~IInisS~~~~~-----------~~ 140 (247)
T 3ged_A 72 KLQRIDVLVNNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNKGRIINIASTRAFQ-----------SE 140 (247)
T ss_dssp HHSCCCEEEECCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGTS-----------CC
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCcEEEEeeccccc-----------CC
Confidence 58999999998742 22345678899999999999999886432 236999999976541 22
Q ss_pred CCCChhHHhHHHHHHHHHHHHhhC-CCCeEEEEecccccCC
Q 019795 151 GAMNPYGRTKQWCEEIAFDVQKAD-PEWRIILLRYFNPVGA 190 (335)
Q Consensus 151 ~~~~~Y~~sK~~~E~~~~~~~~~~-~~~~~~~lR~~~v~G~ 190 (335)
.....|+.||.....+.+.++.++ +++++.++.|+.|--+
T Consensus 141 ~~~~~Y~asKaal~~ltk~lA~ela~~IrVN~I~PG~i~t~ 181 (247)
T 3ged_A 141 PDSEAYASAKGGIVALTHALAMSLGPDVLVNCIAPGWINVT 181 (247)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSBCCC
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEecCcCCCC
Confidence 334579999999999999988774 4789999999887443
|
| >2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=99.87 E-value=1.9e-21 Score=168.22 Aligned_cols=162 Identities=15% Similarity=0.107 Sum_probs=129.5
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
+++|+||||||+|+||++++++|+++|++|++++|+.... ..+.++.+|++|+++++++++.
T Consensus 19 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~----------------~~~~~~~~Dl~d~~~v~~~~~~~~ 82 (253)
T 2nm0_A 19 HMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPP----------------EGFLAVKCDITDTEQVEQAYKEIE 82 (253)
T ss_dssp -CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCC----------------TTSEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhh----------------ccceEEEecCCCHHHHHHHHHHHH
Confidence 4578999999999999999999999999999999975432 2367899999999999888764
Q ss_pred ---CCCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHHHH----cCCCEEEEeccccccCCCCCCCccCCC
Q 019795 80 ---QKFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAMAK----YNCKKLVFSSSATIYGQPEKIPCVEDF 148 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~v~~Ss~~vyg~~~~~~~~e~~ 148 (335)
.++|+|||+||.... ..+.++++..+++|+.++.++++++.. .+.++||++||...+.
T Consensus 83 ~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~----------- 151 (253)
T 2nm0_A 83 ETHGPVEVLIANAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAKKGRVVLISSVVGLL----------- 151 (253)
T ss_dssp HHTCSCSEEEEECSCCTTTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCCCCCC-----------
T ss_pred HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECchhhCC-----------
Confidence 368999999997432 224567889999999999999997643 3567999999976541
Q ss_pred CCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 149 PYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 149 ~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
+..+...|+.+|...+.+++.++.+. .++++.+++|+.+..+
T Consensus 152 ~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~ 195 (253)
T 2nm0_A 152 GSAGQANYAASKAGLVGFARSLARELGSRNITFNVVAPGFVDTD 195 (253)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHCSSSEEEEEEEECSBCC-
T ss_pred CCCCcHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCc
Confidence 11224579999999999999888763 2789999999988665
|
| >3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} | Back alignment and structure |
|---|
Probab=99.87 E-value=1.9e-21 Score=168.12 Aligned_cols=160 Identities=17% Similarity=0.144 Sum_probs=130.1
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc---
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS--- 79 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~--- 79 (335)
|+|+||||||+|+||+++++.|+++|++|++++|+..... -..+.+|++|.++++++++.
T Consensus 21 m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~-----------------~~~~~~d~~d~~~v~~~~~~~~~ 83 (251)
T 3orf_A 21 MSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNA-----------------DHSFTIKDSGEEEIKSVIEKINS 83 (251)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTS-----------------SEEEECSCSSHHHHHHHHHHHHT
T ss_pred cCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccc-----------------ccceEEEeCCHHHHHHHHHHHHH
Confidence 4689999999999999999999999999999999765421 13578899999999888874
Q ss_pred --CCCCEEEEcccccc-----hhhhhcChHHHHHHhHHHHHHHHHHHHHcC--CCEEEEeccccccCCCCCCCccCCCCC
Q 019795 80 --QKFEAVIHFGALKA-----VAESVQHPFRYFDNNLIGTINLYQAMAKYN--CKKLVFSSSATIYGQPEKIPCVEDFPY 150 (335)
Q Consensus 80 --~~~d~vi~~a~~~~-----~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~--~~~~v~~Ss~~vyg~~~~~~~~e~~~~ 150 (335)
.++|+|||+||... ...+.++++..+++|+.++.++++++...- .++||++||...+. +.
T Consensus 84 ~~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~-----------~~ 152 (251)
T 3orf_A 84 KSIKVDTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGASAALN-----------RT 152 (251)
T ss_dssp TTCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGS-----------CC
T ss_pred HcCCCCEEEECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEechhhcc-----------CC
Confidence 37899999999632 233456777899999999999999987642 24899999977652 33
Q ss_pred CCCChhHHhHHHHHHHHHHHHhhC----CCCeEEEEecccccCC
Q 019795 151 GAMNPYGRTKQWCEEIAFDVQKAD----PEWRIILLRYFNPVGA 190 (335)
Q Consensus 151 ~~~~~Y~~sK~~~E~~~~~~~~~~----~~~~~~~lR~~~v~G~ 190 (335)
.+...|+.+|.+.+.+++.++.++ .++++.+++|+.|..+
T Consensus 153 ~~~~~Y~~sKaa~~~~~~~la~e~~~~~~gi~v~~v~PG~v~t~ 196 (251)
T 3orf_A 153 SGMIAYGATKAATHHIIKDLASENGGLPAGSTSLGILPVTLDTP 196 (251)
T ss_dssp TTBHHHHHHHHHHHHHHHHHTSTTSSSCTTCEEEEEEESCBCCH
T ss_pred CCCchhHHHHHHHHHHHHHHHHHhcccCCCcEEEEEecCcCcCc
Confidence 445689999999999999998883 4899999999988654
|
| >3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} | Back alignment and structure |
|---|
Probab=99.87 E-value=8.1e-22 Score=171.51 Aligned_cols=176 Identities=16% Similarity=0.080 Sum_probs=130.4
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
+++|++|||||+|+||++++++|+++|++|++++|.........+....+.. .+.++.++.+|++|+++++++++.
T Consensus 9 l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~~Dv~d~~~v~~~~~~~~ 86 (262)
T 3ksu_A 9 LKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELED--QGAKVALYQSDLSNEEEVAKLFDFAE 86 (262)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHT--TTCEEEEEECCCCSHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHh--cCCcEEEEECCCCCHHHHHHHHHHHH
Confidence 3568999999999999999999999999999998754332222221111111 125788999999999999988874
Q ss_pred ---CCCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHHHHc--CCCEEEEeccccccCCCCCCCccCCCCC
Q 019795 80 ---QKFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAMAKY--NCKKLVFSSSATIYGQPEKIPCVEDFPY 150 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~ 150 (335)
.++|++||+||.... ..+.++++..+++|+.++.++++++... +.+++|++||...+. +.
T Consensus 87 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~-----------~~ 155 (262)
T 3ksu_A 87 KEFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIATSLLAA-----------YT 155 (262)
T ss_dssp HHHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECCCHHHH-----------HH
T ss_pred HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEechhhcc-----------CC
Confidence 379999999997432 2245667789999999999999998764 346899999977653 12
Q ss_pred CCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 151 GAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 151 ~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
.....|+.||...+.+++.++.++ .++++.+++|+.|..+
T Consensus 156 ~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~ 197 (262)
T 3ksu_A 156 GFYSTYAGNKAPVEHYTRAASKELMKQQISVNAIAPGPMDTS 197 (262)
T ss_dssp CCCCC-----CHHHHHHHHHHHHTTTTTCEEEEEEECCCCTH
T ss_pred CCCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCc
Confidence 234579999999999999998885 2789999999887554
|
| >2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.87 E-value=3.2e-21 Score=167.56 Aligned_cols=172 Identities=18% Similarity=0.115 Sum_probs=132.9
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
|++|++|||||+|+||+++++.|+++|++|++++|+........+.+... ..++.++.+|++|++++.++++.
T Consensus 3 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~ 77 (260)
T 2qq5_A 3 MNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSL-----GGQCVPVVCDSSQESEVRSLFEQVD 77 (260)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH-----SSEEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHc-----CCceEEEECCCCCHHHHHHHHHHHH
Confidence 56899999999999999999999999999999999755444444443322 14688999999999988887653
Q ss_pred ----CCCCEEEEcccc--c---------chhhhhcChHHHHHHhHHHHHHHHHHHH----HcCCCEEEEeccccccCCCC
Q 019795 80 ----QKFEAVIHFGAL--K---------AVAESVQHPFRYFDNNLIGTINLYQAMA----KYNCKKLVFSSSATIYGQPE 140 (335)
Q Consensus 80 ----~~~d~vi~~a~~--~---------~~~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~v~~Ss~~vyg~~~ 140 (335)
.++|++||+||. . ....+.+.++.++++|+.++.++++++. +.+.++||++||...+.
T Consensus 78 ~~~~g~id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--- 154 (260)
T 2qq5_A 78 REQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAGQGLIVVISSPGSLQ--- 154 (260)
T ss_dssp HHHTTCCCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGGTCCEEEEECCGGGTS---
T ss_pred HhcCCCceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhcCCcEEEEEcChhhcC---
Confidence 478999999952 1 1122345567889999999988888754 34567999999977652
Q ss_pred CCCccCCCCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 141 KIPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 141 ~~~~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
..+...|+.||...+.+++.++.+. .++++.+++|+.|..+
T Consensus 155 ---------~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~ 197 (260)
T 2qq5_A 155 ---------YMFNVPYGVGKAACDKLAADCAHELRRHGVSCVSLWPGIVQTE 197 (260)
T ss_dssp ---------CCSSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCCSCTT
T ss_pred ---------CCCCCchHHHHHHHHHHHHHHHHHhccCCeEEEEEecCccccH
Confidence 1234589999999999999887653 2899999999998765
|
| >3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=99.87 E-value=5e-21 Score=168.57 Aligned_cols=170 Identities=15% Similarity=0.129 Sum_probs=133.6
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCch-------hhHHhhhhhcCCccccceeEEEccCCCHHHHH
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVP-------EAVDRVKDLAGPELAKKLEFHVGDLRNKDDLD 74 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-------~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~ 74 (335)
+++|++|||||+|+||++++++|+++|++|++++|+..... +..+.+... ..++.++.+|++|+++++
T Consensus 7 l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~ 81 (285)
T 3sc4_A 7 LRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEA-----GGQALPIVGDIRDGDAVA 81 (285)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHH-----TSEEEEEECCTTSHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhc-----CCcEEEEECCCCCHHHHH
Confidence 46789999999999999999999999999999999876432 222333222 257899999999999998
Q ss_pred HHHhc-----CCCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHHHHc----CCCEEEEeccccccCCCCC
Q 019795 75 KLFSS-----QKFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAMAKY----NCKKLVFSSSATIYGQPEK 141 (335)
Q Consensus 75 ~~~~~-----~~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~~v~~Ss~~vyg~~~~ 141 (335)
++++. .++|++||+||.... ..+.++++..+++|+.++.++++++... +.++||++||...+..
T Consensus 82 ~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~--- 158 (285)
T 3sc4_A 82 AAVAKTVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDNPHILTLSPPIRLEP--- 158 (285)
T ss_dssp HHHHHHHHHHSCCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSSSCEEEECCCCCCCSG---
T ss_pred HHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhccC---
Confidence 88875 389999999997532 2345567789999999999999997654 4569999999664421
Q ss_pred CCccCCCCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEeccc
Q 019795 142 IPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFN 186 (335)
Q Consensus 142 ~~~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~ 186 (335)
...+...|+.||...+.+++.++.+. .++++.+++|+.
T Consensus 159 -------~~~~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~v~PG~ 198 (285)
T 3sc4_A 159 -------KWLRPTPYMMAKYGMTLCALGIAEELRDAGIASNTLWPRT 198 (285)
T ss_dssp -------GGSCSHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECSS
T ss_pred -------CCCCCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeCCC
Confidence 11334679999999999999988874 279999999974
|
| >2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A | Back alignment and structure |
|---|
Probab=99.87 E-value=1.8e-21 Score=166.97 Aligned_cols=165 Identities=22% Similarity=0.159 Sum_probs=129.1
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc---
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS--- 79 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~--- 79 (335)
++|++|||||+|+||++++++|+++|++|++++|+... ..+.+ ++.++.+|++| +++.++++.
T Consensus 1 ~~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~---~~~~~----------~~~~~~~D~~~-~~~~~~~~~~~~ 66 (239)
T 2ekp_A 1 MERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEE---AAQSL----------GAVPLPTDLEK-DDPKGLVKRALE 66 (239)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHH---HHHHH----------TCEEEECCTTT-SCHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHH---HHHhh----------CcEEEecCCch-HHHHHHHHHHHH
Confidence 36899999999999999999999999999999996533 11111 26788999999 777666542
Q ss_pred --CCCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHHH----HcCCCEEEEeccccccCCCCCCCccCCCC
Q 019795 80 --QKFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAMA----KYNCKKLVFSSSATIYGQPEKIPCVEDFP 149 (335)
Q Consensus 80 --~~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~ 149 (335)
.++|++||+||.... ..+.++++..+++|+.++.++++++. +.+.++||++||...+... +
T Consensus 67 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---------~ 137 (239)
T 2ekp_A 67 ALGGLHVLVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAGWGRVLFIGSVTTFTAG---------G 137 (239)
T ss_dssp HHTSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC---------T
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhccCC---------C
Confidence 379999999997432 22455677899999999999999864 4466799999998776321 1
Q ss_pred CCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 150 YGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 150 ~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
..+...|+.||...+.+++.++.+. .++++.++||+.+.++
T Consensus 138 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~ 180 (239)
T 2ekp_A 138 PVPIPAYTTAKTALLGLTRALAKEWARLGIRVNLLCPGYVETE 180 (239)
T ss_dssp TSCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSG
T ss_pred CCCCccHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCccCc
Confidence 1345689999999999999887763 2799999999999776
|
| >3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=99.87 E-value=2.1e-21 Score=173.55 Aligned_cols=177 Identities=18% Similarity=0.188 Sum_probs=135.0
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCc--------hhhHHhhhhhcCCccccceeEEEccCCCHHHH
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSV--------PEAVDRVKDLAGPELAKKLEFHVGDLRNKDDL 73 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~--------~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~ 73 (335)
+++|+||||||+|+||+++++.|+++|++|++++|+.... .+..+...+... .....+.++.+|++|++++
T Consensus 44 l~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dv~d~~~v 122 (317)
T 3oec_A 44 LQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVE-EQGRRIIARQADVRDLASL 122 (317)
T ss_dssp TTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHH-HTTCCEEEEECCTTCHHHH
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHH-hcCCeEEEEECCCCCHHHH
Confidence 4578999999999999999999999999999998863221 111111111100 1125788999999999999
Q ss_pred HHHHhc-----CCCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHHHH----cC-CCEEEEeccccccCCC
Q 019795 74 DKLFSS-----QKFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAMAK----YN-CKKLVFSSSATIYGQP 139 (335)
Q Consensus 74 ~~~~~~-----~~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~-~~~~v~~Ss~~vyg~~ 139 (335)
+++++. .++|++||+||.... ..+.++++..+++|+.++.++++++.. .+ ..+||++||...+.
T Consensus 123 ~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~g~Iv~isS~~~~~-- 200 (317)
T 3oec_A 123 QAVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLR-- 200 (317)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCSCEEEEEECCGGGSS--
T ss_pred HHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCCEEEEECcHHhcC--
Confidence 988875 389999999997532 224567778999999999999998743 22 35899999977652
Q ss_pred CCCCccCCCCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 140 EKIPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 140 ~~~~~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
+..+...|+.||...+.+++.++.++ .++++.+++|+.|.++
T Consensus 201 ---------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~ 244 (317)
T 3oec_A 201 ---------GAPGQSHYAASKHGVQGLMLSLANEVGRHNIRVNSVNPGAVNTE 244 (317)
T ss_dssp ---------CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSH
T ss_pred ---------CCCCCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCc
Confidence 23345689999999999999988774 2799999999999876
|
| >1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=3e-21 Score=167.66 Aligned_cols=173 Identities=16% Similarity=0.139 Sum_probs=135.2
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHh---CCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHh
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQ---GGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFS 78 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~---~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~ 78 (335)
+++|++|||||+|+||++++++|++ +|++|++++|+........+.+..... ..++.++.+|++|++++.++++
T Consensus 4 l~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~---~~~~~~~~~Dv~~~~~v~~~~~ 80 (259)
T 1oaa_A 4 LGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQP---DLKVVLAAADLGTEAGVQRLLS 80 (259)
T ss_dssp CBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCT---TSEEEEEECCTTSHHHHHHHHH
T ss_pred CCCcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCC---CCeEEEEecCCCCHHHHHHHHH
Confidence 4678999999999999999999999 899999999976544444444432210 1468899999999999888776
Q ss_pred c-------CCCC--EEEEcccccch-----h--hhhcChHHHHHHhHHHHHHHHHHHHHc------CCCEEEEecccccc
Q 019795 79 S-------QKFE--AVIHFGALKAV-----A--ESVQHPFRYFDNNLIGTINLYQAMAKY------NCKKLVFSSSATIY 136 (335)
Q Consensus 79 ~-------~~~d--~vi~~a~~~~~-----~--~~~~~~~~~~~~nv~~~~~l~~~~~~~------~~~~~v~~Ss~~vy 136 (335)
. .++| ++||+||.... . .+.++++..+++|+.++.++++++... +.++||++||...+
T Consensus 81 ~~~~~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~g~iv~isS~~~~ 160 (259)
T 1oaa_A 81 AVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCAL 160 (259)
T ss_dssp HHHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGT
T ss_pred HHHhccccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCceEEEEcCchhc
Confidence 3 2578 99999997421 1 234667789999999999999998653 23579999998765
Q ss_pred CCCCCCCccCCCCCCCCChhHHhHHHHHHHHHHHHhhCCCCeEEEEeccccc
Q 019795 137 GQPEKIPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKADPEWRIILLRYFNPV 188 (335)
Q Consensus 137 g~~~~~~~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~lR~~~v~ 188 (335)
. +..+...|+.||...+.+++.++.+..++++.++.|+.+-
T Consensus 161 ~-----------~~~~~~~Y~asKaa~~~~~~~la~e~~~i~vn~v~PG~v~ 201 (259)
T 1oaa_A 161 Q-----------PYKGWGLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLD 201 (259)
T ss_dssp S-----------CCTTCHHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBS
T ss_pred C-----------CCCCccHHHHHHHHHHHHHHHHHhhCCCceEEEecCCCcC
Confidence 2 3344568999999999999999998766888888887763
|
| >4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=99.86 E-value=3.2e-21 Score=165.70 Aligned_cols=173 Identities=18% Similarity=0.142 Sum_probs=139.3
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
+++|++|||||+++||+++++.|+++|++|++.+|+.....+..+.+.+.. .++..+.+|++|++++++++++
T Consensus 7 L~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g-----~~~~~~~~Dv~~~~~v~~~~~~~~ 81 (255)
T 4g81_D 7 LTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKG-----YDAHGVAFDVTDELAIEAAFSKLD 81 (255)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTT-----CCEEECCCCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC-----CcEEEEEeeCCCHHHHHHHHHHHH
Confidence 468999999999999999999999999999999997766666666655432 5688899999999999888775
Q ss_pred ---CCCCEEEEcccccc----hhhhhcChHHHHHHhHHHHHHHHHHHHH-----cCCCEEEEeccccccCCCCCCCccCC
Q 019795 80 ---QKFEAVIHFGALKA----VAESVQHPFRYFDNNLIGTINLYQAMAK-----YNCKKLVFSSSATIYGQPEKIPCVED 147 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~----~~~~~~~~~~~~~~nv~~~~~l~~~~~~-----~~~~~~v~~Ss~~vyg~~~~~~~~e~ 147 (335)
+++|++|||||... ...+.++++.++++|+.|+..+++++.. .+-.+||++||.....
T Consensus 82 ~~~G~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~~~---------- 151 (255)
T 4g81_D 82 AEGIHVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQA---------- 151 (255)
T ss_dssp HTTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTS----------
T ss_pred HHCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhhcC----------
Confidence 48999999999743 2335678889999999999999987532 2346999999976541
Q ss_pred CCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 148 FPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 148 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
+......|+.||.....+.+.++.++ .++++.++.|+.|..+
T Consensus 152 -~~~~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~ 195 (255)
T 4g81_D 152 -ARPTVAPYTAAKGGIKMLTCSMAAEWAQFNIQTNAIGPGYILTD 195 (255)
T ss_dssp -BCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCG
T ss_pred -CCCCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCCc
Confidence 22334579999999999999888774 2789999999988554
|
| >1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... | Back alignment and structure |
|---|
Probab=99.86 E-value=6.7e-21 Score=170.91 Aligned_cols=177 Identities=15% Similarity=0.089 Sum_probs=135.2
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcC-CccccceeEEEccCCCHHHHHHHHhc--
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAG-PELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
++|+||||||+|+||++++++|+++|++|++++|+..........+..... .....++.++.+|++|++++.++++.
T Consensus 1 ~~k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~ 80 (327)
T 1jtv_A 1 ARTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVT 80 (327)
T ss_dssp CCEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCT
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHHHh
Confidence 368999999999999999999999999998888765554433333322110 00114688999999999999999885
Q ss_pred -CCCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHH----HHcCCCEEEEeccccccCCCCCCCccCCCCC
Q 019795 80 -QKFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAM----AKYNCKKLVFSSSATIYGQPEKIPCVEDFPY 150 (335)
Q Consensus 80 -~~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~ 150 (335)
.++|+||||||.... ..+.++++.++++|+.++.++++++ ++.+.++||++||...+. +.
T Consensus 81 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~IV~isS~~~~~-----------~~ 149 (327)
T 1jtv_A 81 EGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLM-----------GL 149 (327)
T ss_dssp TSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTS-----------CC
T ss_pred cCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCccccc-----------CC
Confidence 369999999997422 2244567789999999999999985 344667999999977652 22
Q ss_pred CCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 151 GAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 151 ~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
.....|+.||...+.+++.++.+. .++++.+++|+.|..+
T Consensus 150 ~~~~~Y~aSK~a~~~~~~~la~el~~~gI~v~~v~PG~v~T~ 191 (327)
T 1jtv_A 150 PFNDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTA 191 (327)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-
T ss_pred CCChHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCcccCh
Confidence 234589999999999999888752 2899999999998765
|
| >3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=5.3e-21 Score=168.04 Aligned_cols=170 Identities=19% Similarity=0.146 Sum_probs=132.4
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
+++|++|||||+|+||++++++|+++|++|++++|+......... .. ..++.++.+|++|++++.++++.
T Consensus 3 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~----~~----~~~~~~~~~Dv~~~~~v~~~~~~~~ 74 (281)
T 3zv4_A 3 LTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEV----AH----GGNAVGVVGDVRSLQDQKRAAERCL 74 (281)
T ss_dssp TTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH----HT----BTTEEEEECCTTCHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHH----Hc----CCcEEEEEcCCCCHHHHHHHHHHHH
Confidence 568999999999999999999999999999999986443322222 11 25788999999999998888775
Q ss_pred ---CCCCEEEEcccccchh---------hhhcChHHHHHHhHHHHHHHHHHHHHc---CCCEEEEeccccccCCCCCCCc
Q 019795 80 ---QKFEAVIHFGALKAVA---------ESVQHPFRYFDNNLIGTINLYQAMAKY---NCKKLVFSSSATIYGQPEKIPC 144 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~~~---------~~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~~v~~Ss~~vyg~~~~~~~ 144 (335)
.++|++||+||..... ...+.++..+++|+.++.++++++... +.+++|++||...+.
T Consensus 75 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~------- 147 (281)
T 3zv4_A 75 AAFGKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSSRGSVVFTISNAGFY------- 147 (281)
T ss_dssp HHHSCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGTS-------
T ss_pred HhcCCCCEEEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCeEEEEecchhcc-------
Confidence 3899999999974211 112346788999999999999987542 126999999977552
Q ss_pred cCCCCCCCCChhHHhHHHHHHHHHHHHhhC-CCCeEEEEecccccCC
Q 019795 145 VEDFPYGAMNPYGRTKQWCEEIAFDVQKAD-PEWRIILLRYFNPVGA 190 (335)
Q Consensus 145 ~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-~~~~~~~lR~~~v~G~ 190 (335)
+..+...|+.||...+.+++.++.++ +.+++.++.|+.|..+
T Consensus 148 ----~~~~~~~Y~asKaa~~~l~~~la~e~~~~Irvn~v~PG~v~T~ 190 (281)
T 3zv4_A 148 ----PNGGGPLYTATKHAVVGLVRQMAFELAPHVRVNGVAPGGMNTD 190 (281)
T ss_dssp ----SSSSCHHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSSCC-
T ss_pred ----CCCCCchhHHHHHHHHHHHHHHHHHhcCCCEEEEEECCcCcCC
Confidence 33345679999999999999998874 3589999999998765
|
| >4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.86 E-value=5.6e-21 Score=165.67 Aligned_cols=170 Identities=16% Similarity=0.120 Sum_probs=135.8
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
+++|++|||||+++||+++++.|+++|++|++++|+.....+..+++ +.+...+.+|++|++++++++++
T Consensus 27 L~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~--------g~~~~~~~~Dv~~~~~v~~~~~~~~ 98 (273)
T 4fgs_A 27 LNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEI--------GGGAVGIQADSANLAELDRLYEKVK 98 (273)
T ss_dssp TTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH--------CTTCEEEECCTTCHHHHHHHHHHHH
T ss_pred hCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc--------CCCeEEEEecCCCHHHHHHHHHHHH
Confidence 46799999999999999999999999999999999755444333332 15678899999999999988875
Q ss_pred ---CCCCEEEEcccccc----hhhhhcChHHHHHHhHHHHHHHHHHHHHc--CCCEEEEeccccccCCCCCCCccCCCCC
Q 019795 80 ---QKFEAVIHFGALKA----VAESVQHPFRYFDNNLIGTINLYQAMAKY--NCKKLVFSSSATIYGQPEKIPCVEDFPY 150 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~----~~~~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~ 150 (335)
+++|++||+||... ...+.++++.++++|+.++.++++++... .-+++|++||....- +.
T Consensus 99 ~~~G~iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInisS~~~~~-----------~~ 167 (273)
T 4fgs_A 99 AEAGRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTGSTAGST-----------GT 167 (273)
T ss_dssp HHHSCEEEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGGS-----------CC
T ss_pred HHcCCCCEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEeehhhcc-----------CC
Confidence 48999999999742 23356778899999999999999997654 225899999966541 22
Q ss_pred CCCChhHHhHHHHHHHHHHHHhhCC--CCeEEEEecccccCC
Q 019795 151 GAMNPYGRTKQWCEEIAFDVQKADP--EWRIILLRYFNPVGA 190 (335)
Q Consensus 151 ~~~~~Y~~sK~~~E~~~~~~~~~~~--~~~~~~lR~~~v~G~ 190 (335)
.....|+.||.....+.+.++.++. ++++.++.|+.|--+
T Consensus 168 ~~~~~Y~asKaav~~ltr~lA~Ela~~gIrVN~V~PG~i~T~ 209 (273)
T 4fgs_A 168 PAFSVYAASKAALRSFARNWILDLKDRGIRINTLSPGPTETT 209 (273)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHTTTSCEEEEEEEECSBCC-
T ss_pred CCchHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCCh
Confidence 3345799999999999999988852 689999999887554
|
| >3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.86 E-value=1.9e-20 Score=168.94 Aligned_cols=171 Identities=13% Similarity=0.117 Sum_probs=134.2
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCch-------hhHHhhhhhcCCccccceeEEEccCCCHHHHHH
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVP-------EAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDK 75 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-------~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~ 75 (335)
++|+||||||+|+||++++++|+++|++|++++|+..... ...+.+... ..++.++.+|++|++++++
T Consensus 44 ~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~-----g~~~~~~~~Dv~d~~~v~~ 118 (346)
T 3kvo_A 44 AGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAV-----GGKALPCIVDVRDEQQISA 118 (346)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHT-----TCEEEEEECCTTCHHHHHH
T ss_pred CCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhc-----CCeEEEEEccCCCHHHHHH
Confidence 5689999999999999999999999999999999876532 222223221 2578899999999999998
Q ss_pred HHhc-----CCCCEEEEcccccc----hhhhhcChHHHHHHhHHHHHHHHHHHHH----cCCCEEEEeccccccCCCCCC
Q 019795 76 LFSS-----QKFEAVIHFGALKA----VAESVQHPFRYFDNNLIGTINLYQAMAK----YNCKKLVFSSSATIYGQPEKI 142 (335)
Q Consensus 76 ~~~~-----~~~d~vi~~a~~~~----~~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~v~~Ss~~vyg~~~~~ 142 (335)
+++. .++|+|||+||... ...+.+.++.++++|+.++.++++++.. .+..+||++||...+...
T Consensus 119 ~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~~~~~~~--- 195 (346)
T 3kvo_A 119 AVEKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVAHILNISPPLNLNPV--- 195 (346)
T ss_dssp HHHHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCSSCEEEEECCCCCCCGG---
T ss_pred HHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCCEEEEECCHHHcCCC---
Confidence 8875 38999999999743 2234456778999999999999999753 345799999997654210
Q ss_pred CccCCCCCCCCChhHHhHHHHHHHHHHHHhhC-CCCeEEEEecccc
Q 019795 143 PCVEDFPYGAMNPYGRTKQWCEEIAFDVQKAD-PEWRIILLRYFNP 187 (335)
Q Consensus 143 ~~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-~~~~~~~lR~~~v 187 (335)
+..+...|+.+|...+.+++.++.++ .++++.++.|+.+
T Consensus 196 ------~~~~~~~Y~aSKaal~~l~~~la~e~~~gIrvn~v~PG~~ 235 (346)
T 3kvo_A 196 ------WFKQHCAYTIAKYGMSMYVLGMAEEFKGEIAVNALWPKTA 235 (346)
T ss_dssp ------GTSSSHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECSBC
T ss_pred ------CCCCchHHHHHHHHHHHHHHHHHHHhcCCcEEEEEeCCCc
Confidence 13345689999999999999988875 3788999999853
|
| >4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.85 E-value=1.4e-20 Score=160.30 Aligned_cols=171 Identities=16% Similarity=0.060 Sum_probs=137.0
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCC
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQK 81 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~ 81 (335)
+++|++|||||+++||+++++.|+++|++|++.+|+.. ++..+.+.+.. .+...+.+|++|+++++++++..+
T Consensus 7 L~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~--~~~~~~~~~~g-----~~~~~~~~Dv~d~~~v~~~~~~g~ 79 (247)
T 4hp8_A 7 LEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAP--DETLDIIAKDG-----GNASALLIDFADPLAAKDSFTDAG 79 (247)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCC--HHHHHHHHHTT-----CCEEEEECCTTSTTTTTTSSTTTC
T ss_pred CCCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcH--HHHHHHHHHhC-----CcEEEEEccCCCHHHHHHHHHhCC
Confidence 46899999999999999999999999999999998643 34444444332 578899999999999999998889
Q ss_pred CCEEEEcccccc----hhhhhcChHHHHHHhHHHHHHHHHHHH----HcC-CCEEEEeccccccCCCCCCCccCCCCCCC
Q 019795 82 FEAVIHFGALKA----VAESVQHPFRYFDNNLIGTINLYQAMA----KYN-CKKLVFSSSATIYGQPEKIPCVEDFPYGA 152 (335)
Q Consensus 82 ~d~vi~~a~~~~----~~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~-~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~ 152 (335)
+|++|||||... ...+.++++.++++|+.|+..+++++. +.+ -.+||++||....- +...
T Consensus 80 iDiLVNNAGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~~~-----------g~~~ 148 (247)
T 4hp8_A 80 FDILVNNAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLSFQ-----------GGIR 148 (247)
T ss_dssp CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTS-----------CCSS
T ss_pred CCEEEECCCCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhhCC-----------CCCC
Confidence 999999999742 233567788999999999999999743 333 46999999966431 2233
Q ss_pred CChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 153 MNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 153 ~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
...|+.||.....+.+.++.++ .++++.++-|+.|--+
T Consensus 149 ~~~Y~asKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~ 188 (247)
T 4hp8_A 149 VPSYTAAKHGVAGLTKLLANEWAAKGINVNAIAPGYIETN 188 (247)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSG
T ss_pred ChHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCc
Confidence 4579999999999999888774 2789999999887544
|
| >3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.85 E-value=1.2e-20 Score=165.21 Aligned_cols=172 Identities=15% Similarity=0.092 Sum_probs=133.0
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchh-------hHHhhhhhcCCccccceeEEEccCCCHHHHH
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPE-------AVDRVKDLAGPELAKKLEFHVGDLRNKDDLD 74 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-------~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~ 74 (335)
+++|++|||||+|+||++++++|+++|++|++++|+...... ....+... ..++.++.+|++|++++.
T Consensus 4 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~ 78 (274)
T 3e03_A 4 LSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAA-----GGQGLALKCDIREEDQVR 78 (274)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHH-----TSEEEEEECCTTCHHHHH
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhc-----CCeEEEEeCCCCCHHHHH
Confidence 567999999999999999999999999999999998765322 22222221 257889999999999998
Q ss_pred HHHhc-----CCCCEEEEcccccc----hhhhhcChHHHHHHhHHHHHHHHHHHHH----cCCCEEEEeccccccCCCCC
Q 019795 75 KLFSS-----QKFEAVIHFGALKA----VAESVQHPFRYFDNNLIGTINLYQAMAK----YNCKKLVFSSSATIYGQPEK 141 (335)
Q Consensus 75 ~~~~~-----~~~d~vi~~a~~~~----~~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~v~~Ss~~vyg~~~~ 141 (335)
+++++ .++|++||+||... ...+.++++.++++|+.++.++++++.. .+.++||++||...+...
T Consensus 79 ~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~-- 156 (274)
T 3e03_A 79 AAVAATVDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAPNPHILTLAPPPSLNPA-- 156 (274)
T ss_dssp HHHHHHHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSSSCEEEECCCCCCCCHH--
T ss_pred HHHHHHHHHcCCCCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcCCceEEEECChHhcCCC--
Confidence 88775 38999999999742 2234556778999999999999998754 345699999997654210
Q ss_pred CCccCCCCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccc
Q 019795 142 IPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNP 187 (335)
Q Consensus 142 ~~~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v 187 (335)
+..+...|+.||...+.+++.++.++ .++++.+++|+.+
T Consensus 157 -------~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~ 197 (274)
T 3e03_A 157 -------WWGAHTGYTLAKMGMSLVTLGLAAEFGPQGVAINALWPRTV 197 (274)
T ss_dssp -------HHHHCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECSBC
T ss_pred -------CCCCCchHHHHHHHHHHHHHHHHHHhhhcCEEEEEEECCcc
Confidence 02234579999999999999888774 2799999999853
|
| >1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=7.3e-21 Score=168.02 Aligned_cols=174 Identities=16% Similarity=0.062 Sum_probs=133.9
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEe-cCCCCchhhHHhhhhhcCCccccceeEEEccCCCHH---------
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLID-NLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKD--------- 71 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~-r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~--------- 71 (335)
+++|++|||||+|+||+++++.|+++|++|++++ |+........+.+....+ .++.++.+|++|.+
T Consensus 7 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~~~~----~~~~~~~~Dl~~~~~~~~~~~~~ 82 (291)
T 1e7w_A 7 PTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRP----NSAITVQADLSNVATAPVSGADG 82 (291)
T ss_dssp -CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHST----TCEEEEECCCSSSCBCCCC----
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhhhcC----CeeEEEEeecCCccccccccccc
Confidence 4568999999999999999999999999999999 865444444444331111 56889999999998
Q ss_pred --------HHHHHHhc-----CCCCEEEEcccccch----hhh--------------hcChHHHHHHhHHHHHHHHHHHH
Q 019795 72 --------DLDKLFSS-----QKFEAVIHFGALKAV----AES--------------VQHPFRYFDNNLIGTINLYQAMA 120 (335)
Q Consensus 72 --------~~~~~~~~-----~~~d~vi~~a~~~~~----~~~--------------~~~~~~~~~~nv~~~~~l~~~~~ 120 (335)
++.++++. .++|++||+||.... ..+ .+.++.++++|+.++.++++++.
T Consensus 83 ~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~ 162 (291)
T 1e7w_A 83 SAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFA 162 (291)
T ss_dssp CCCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred ccccchHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHhHHHHHHHHHHH
Confidence 88888774 379999999997432 112 45667899999999999999875
Q ss_pred H----cC------CCEEEEeccccccCCCCCCCccCCCCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEeccccc
Q 019795 121 K----YN------CKKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPV 188 (335)
Q Consensus 121 ~----~~------~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~ 188 (335)
. .+ .++||++||...+. +..+...|+.||...+.+++.++.+. .++++.+++|+.|.
T Consensus 163 ~~m~~~~~~~~~~~g~Iv~isS~~~~~-----------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~ 231 (291)
T 1e7w_A 163 HRVAGTPAKHRGTNYSIINMVDAMTNQ-----------PLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSV 231 (291)
T ss_dssp HHHHTSCGGGSCSCEEEEEECCTTTTS-----------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBC
T ss_pred HHHHhcCCCCCCCCcEEEEEechhhcC-----------CCCCCchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCcc
Confidence 3 33 46899999977652 23345689999999999999887763 27899999999875
Q ss_pred CC
Q 019795 189 GA 190 (335)
Q Consensus 189 G~ 190 (335)
.+
T Consensus 232 T~ 233 (291)
T 1e7w_A 232 LV 233 (291)
T ss_dssp CG
T ss_pred CC
Confidence 54
|
| >4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=5.5e-20 Score=158.56 Aligned_cols=172 Identities=14% Similarity=0.111 Sum_probs=136.4
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
+++|++|||||+++||+++++.|+++|++|++++|+.... +..+.+.+.. .++.++.+|++|++++++++++
T Consensus 5 L~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~-~~~~~~~~~~-----~~~~~~~~Dv~~~~~v~~~v~~~~ 78 (258)
T 4gkb_A 5 LQDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDG-AFLDALAQRQ-----PRATYLPVELQDDAQCRDAVAQTI 78 (258)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCH-HHHHHHHHHC-----TTCEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccH-HHHHHHHhcC-----CCEEEEEeecCCHHHHHHHHHHHH
Confidence 4679999999999999999999999999999999987653 3333343322 5788999999999998888775
Q ss_pred ---CCCCEEEEcccccc---hhhhhcChHHHHHHhHHHHHHHHHHHHHc---CCCEEEEeccccccCCCCCCCccCCCCC
Q 019795 80 ---QKFEAVIHFGALKA---VAESVQHPFRYFDNNLIGTINLYQAMAKY---NCKKLVFSSSATIYGQPEKIPCVEDFPY 150 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~---~~~~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~~v~~Ss~~vyg~~~~~~~~e~~~~ 150 (335)
+++|++||+||... ...+.++++..+++|+.++..+++++... +-.+||++||..... +.
T Consensus 79 ~~~G~iDiLVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~~~-----------~~ 147 (258)
T 4gkb_A 79 ATFGRLDGLVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKATRGAIVNISSKTAVT-----------GQ 147 (258)
T ss_dssp HHHSCCCEEEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTHHHH-----------CC
T ss_pred HHhCCCCEEEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEeehhhcc-----------CC
Confidence 58999999999732 23345678889999999999999986432 226999999976541 22
Q ss_pred CCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 151 GAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 151 ~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
.....|+.||...+.+.+.++.++ .++++.++.|+.|--+
T Consensus 148 ~~~~~Y~asKaav~~ltr~lA~ela~~gIrVN~V~PG~i~T~ 189 (258)
T 4gkb_A 148 GNTSGYCASKGAQLALTREWAVALREHGVRVNAVIPAEVMTP 189 (258)
T ss_dssp SSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCS
T ss_pred CCchHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCCh
Confidence 334579999999999999888773 2799999999988655
|
| >2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ... | Back alignment and structure |
|---|
Probab=99.84 E-value=1.5e-20 Score=164.14 Aligned_cols=169 Identities=18% Similarity=0.076 Sum_probs=130.8
Q ss_pred CCCeEEEEcC--CChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc-
Q 019795 3 SEKNILVTGG--AGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS- 79 (335)
Q Consensus 3 ~~~~vlItGa--tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~- 79 (335)
++|++||||| +|+||+++++.|+++|++|++++|+.... .+.+.+.. +.++.++.+|++|+++++++++.
T Consensus 6 ~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~---~~~~~~~~----~~~~~~~~~Dv~~~~~v~~~~~~~ 78 (269)
T 2h7i_A 6 DGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRL---IQRITDRL----PAKAPLLELDVQNEEHLASLAGRV 78 (269)
T ss_dssp TTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHH---HHHHHTTS----SSCCCEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHH---HHHHHHhc----CCCceEEEccCCCHHHHHHHHHHH
Confidence 4689999999 99999999999999999999999864321 12222211 24678899999999999988874
Q ss_pred ----C---CCCEEEEcccccc---------hhhhhcChHHHHHHhHHHHHHHHHHHHHc--CCCEEEEeccccccCCCCC
Q 019795 80 ----Q---KFEAVIHFGALKA---------VAESVQHPFRYFDNNLIGTINLYQAMAKY--NCKKLVFSSSATIYGQPEK 141 (335)
Q Consensus 80 ----~---~~d~vi~~a~~~~---------~~~~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~v~~Ss~~vyg~~~~ 141 (335)
. ++|++||+||... ...+.++++..+++|+.++.++++++... ..++||++||...++
T Consensus 79 ~~~~g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~iss~~~~~---- 154 (269)
T 2h7i_A 79 TEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPSRA---- 154 (269)
T ss_dssp HHHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCSSC----
T ss_pred HHHhCCCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCeEEEEcCccccc----
Confidence 2 7999999999753 12234566788999999999999998754 125899999865432
Q ss_pred CCccCCCCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 142 IPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 142 ~~~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
......|+.+|...+.+++.++.+. .++++.+++|+.+..+
T Consensus 155 --------~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~ 197 (269)
T 2h7i_A 155 --------MPAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTL 197 (269)
T ss_dssp --------CTTTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCH
T ss_pred --------cCchHHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccch
Confidence 2334679999999999999887763 3899999999887543
|
| >1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=1.2e-20 Score=163.40 Aligned_cols=169 Identities=17% Similarity=0.168 Sum_probs=123.0
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHH-HHhc-CC
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDK-LFSS-QK 81 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~-~~~~-~~ 81 (335)
||++|||||+|+||+++++.|+++|++|++++|+........+ +.... ..+..+ |..+.+.+.+ +.+. .+
T Consensus 1 Mk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-l~~~~-----~~~~~~--d~~~v~~~~~~~~~~~g~ 72 (254)
T 1zmt_A 1 MSTAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEA-FAETY-----PQLKPM--SEQEPAELIEAVTSAYGQ 72 (254)
T ss_dssp -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHH-HHHHC-----TTSEEC--CCCSHHHHHHHHHHHHSC
T ss_pred CeEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-HHhcC-----CcEEEE--CHHHHHHHHHHHHHHhCC
Confidence 5799999999999999999999999999999997665444332 32211 233333 4444332222 2111 37
Q ss_pred CCEEEEccccc-c----hhhhhcChHHHHHHhHHHHHHHHHHHH----HcCCCEEEEeccccccCCCCCCCccCCCCCCC
Q 019795 82 FEAVIHFGALK-A----VAESVQHPFRYFDNNLIGTINLYQAMA----KYNCKKLVFSSSATIYGQPEKIPCVEDFPYGA 152 (335)
Q Consensus 82 ~d~vi~~a~~~-~----~~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~ 152 (335)
+|+|||+||.. . ...+.++++..+++|+.++.++++++. +.+.++||++||...+. +..+
T Consensus 73 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~~ 141 (254)
T 1zmt_A 73 VDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFG-----------PWKE 141 (254)
T ss_dssp CCEEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTS-----------CCTT
T ss_pred CCEEEECCCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCccccc-----------CCCC
Confidence 99999999975 2 122445677899999999999999864 34557999999977652 2234
Q ss_pred CChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCCC
Q 019795 153 MNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGAH 191 (335)
Q Consensus 153 ~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~~ 191 (335)
...|+.||...+.+++.++.+. .++++.+++|+.|+|+.
T Consensus 142 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~~~~ 182 (254)
T 1zmt_A 142 LSTYTSARAGACTLANALSKELGEYNIPVFAIGPNYLHSED 182 (254)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBT
T ss_pred chHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccccc
Confidence 5689999999999999887763 27999999999998874
|
| >3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=99.84 E-value=4.8e-21 Score=164.97 Aligned_cols=166 Identities=16% Similarity=0.154 Sum_probs=113.3
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHH---HHHh
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLD---KLFS 78 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~---~~~~ 78 (335)
+++|++|||||+|+||++++++|++ |+.|++++|+..... .+.+. .++.++.+|+++..... +.++
T Consensus 3 l~~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~~----~~~~~------~~~~~~~~D~~~~~~~~~~~~~~~ 71 (245)
T 3e9n_A 3 LKKKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEHLA----ALAEI------EGVEPIESDIVKEVLEEGGVDKLK 71 (245)
T ss_dssp ---CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCHHHHH----HHHTS------TTEEEEECCHHHHHHTSSSCGGGT
T ss_pred CCCCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHHH----HHHhh------cCCcceecccchHHHHHHHHHHHH
Confidence 5679999999999999999999987 999999998643322 22221 46888999998875422 2222
Q ss_pred c-CCCCEEEEcccccchhh----hhcChHHHHHHhHHHHHHHHHHHHH----cCCCEEEEeccccccCCCCCCCccCCCC
Q 019795 79 S-QKFEAVIHFGALKAVAE----SVQHPFRYFDNNLIGTINLYQAMAK----YNCKKLVFSSSATIYGQPEKIPCVEDFP 149 (335)
Q Consensus 79 ~-~~~d~vi~~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~v~~Ss~~vyg~~~~~~~~e~~~ 149 (335)
. .++|+|||+||...... +.++++..+++|+.++.++++++.. .+ +++|++||...+. +
T Consensus 72 ~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-g~iv~isS~~~~~-----------~ 139 (245)
T 3e9n_A 72 NLDHVDTLVHAAAVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAAS-GCVIYINSGAGNG-----------P 139 (245)
T ss_dssp TCSCCSEEEECC----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEC------------------
T ss_pred hcCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEcCccccc-----------C
Confidence 2 37999999999753322 4556778999999999998888643 34 6999999977663 2
Q ss_pred CCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 150 YGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 150 ~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
..+...|+.||...+.+++.++.+. .++++.+++|+.+.++
T Consensus 140 ~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~ 182 (245)
T 3e9n_A 140 HPGNTIYAASKHALRGLADAFRKEEANNGIRVSTVSPGPTNTP 182 (245)
T ss_dssp ---CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC---
T ss_pred CCCchHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCccCc
Confidence 3345689999999999999888763 2799999999988775
|
| >4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A | Back alignment and structure |
|---|
Probab=99.84 E-value=1.9e-19 Score=155.94 Aligned_cols=174 Identities=16% Similarity=0.034 Sum_probs=136.1
Q ss_pred CCCCeEEEEcCCC--hhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc
Q 019795 2 ASEKNILVTGGAG--FIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS 79 (335)
Q Consensus 2 ~~~~~vlItGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~ 79 (335)
+++|++|||||+| +||+++++.|+++|++|++.+|+.....+..+.+.+..+ .++.++.+|++|++++.+++++
T Consensus 4 l~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~----~~~~~~~~Dv~~~~~v~~~~~~ 79 (256)
T 4fs3_A 4 LENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQ----PEAHLYQIDVQSDEEVINGFEQ 79 (256)
T ss_dssp CTTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTC----SSCEEEECCTTCHHHHHHHHHH
T ss_pred CCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC----CcEEEEEccCCCHHHHHHHHHH
Confidence 4689999999876 999999999999999999999987666665555554433 5788999999999999888764
Q ss_pred -----CCCCEEEEcccccchh--------hhhcChHHHHHHhHHHHHHHHHHHHHc--CCCEEEEeccccccCCCCCCCc
Q 019795 80 -----QKFEAVIHFGALKAVA--------ESVQHPFRYFDNNLIGTINLYQAMAKY--NCKKLVFSSSATIYGQPEKIPC 144 (335)
Q Consensus 80 -----~~~d~vi~~a~~~~~~--------~~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~v~~Ss~~vyg~~~~~~~ 144 (335)
.++|++||+|+..... ...+++...+++|+.++..+.+++... +-.+||++||....
T Consensus 80 ~~~~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVnisS~~~~-------- 151 (256)
T 4fs3_A 80 IGKDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATTYLGGE-------- 151 (256)
T ss_dssp HHHHHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCEEEEEEECGGGT--------
T ss_pred HHHHhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEEEeccccc--------
Confidence 5899999999964321 123345567889999999999887654 23589999996643
Q ss_pred cCCCCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 145 VEDFPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 145 ~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
.+......|+.||...+.+.+.++.++ .++++.++.|+.|-.+
T Consensus 152 ---~~~~~~~~Y~asKaal~~ltr~lA~Ela~~gIrVN~V~PG~i~T~ 196 (256)
T 4fs3_A 152 ---FAVQNYNVMGVAKASLEANVKYLALDLGPDNIRVNAISAGPIRTL 196 (256)
T ss_dssp ---SCCTTTHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSG
T ss_pred ---cCcccchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCCCCCh
Confidence 133345679999999999999888774 2799999999887554
|
| >4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=1.7e-19 Score=155.94 Aligned_cols=161 Identities=16% Similarity=0.105 Sum_probs=127.4
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc---
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS--- 79 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~--- 79 (335)
++|++|||||+++||+++++.|+++|++|++++|+..... .....+.+|++|+++++++++.
T Consensus 10 ~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~---------------~~~~~~~~Dv~~~~~v~~~~~~~~~ 74 (261)
T 4h15_A 10 RGKRALITAGTKGAGAATVSLFLELGAQVLTTARARPEGL---------------PEELFVEADLTTKEGCAIVAEATRQ 74 (261)
T ss_dssp TTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCTTS---------------CTTTEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchhCC---------------CcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 4589999999999999999999999999999999654311 2345789999999998887775
Q ss_pred --CCCCEEEEcccccc------hhhhhcChHHHHHHhHHHHHHHHHHHH----HcCCCEEEEeccccccCCCCCCCccCC
Q 019795 80 --QKFEAVIHFGALKA------VAESVQHPFRYFDNNLIGTINLYQAMA----KYNCKKLVFSSSATIYGQPEKIPCVED 147 (335)
Q Consensus 80 --~~~d~vi~~a~~~~------~~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~v~~Ss~~vyg~~~~~~~~e~ 147 (335)
+++|++||+||... ...+.++++..+++|+.++.++++++. +.+-.+||++||....-
T Consensus 75 ~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Iv~isS~~~~~---------- 144 (261)
T 4h15_A 75 RLGGVDVIVHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARGSGVVVHVTSIQRVL---------- 144 (261)
T ss_dssp HTSSCSEEEECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS----------
T ss_pred HcCCCCEEEECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcCCceEEEEEehhhcc----------
Confidence 48999999998632 223456788999999999999998754 44557999999966431
Q ss_pred CCC-CCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccC
Q 019795 148 FPY-GAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVG 189 (335)
Q Consensus 148 ~~~-~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G 189 (335)
+. .....|+.||...+.+.+.++.++ .++++.++.|+.|--
T Consensus 145 -~~~~~~~~Y~asKaal~~lt~~lA~Ela~~gIrVN~V~PG~i~T 188 (261)
T 4h15_A 145 -PLPESTTAYAAAKAALSTYSKAMSKEVSPKGVRVVRVSPGWIET 188 (261)
T ss_dssp -CCTTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC
T ss_pred -CCCCccHHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEeCCCcCC
Confidence 21 124579999999999999888773 278999999987744
|
| >1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=4.8e-21 Score=171.87 Aligned_cols=174 Identities=17% Similarity=0.132 Sum_probs=128.0
Q ss_pred CCCCCeEEEEcCCChhhHHHHHHHHhCCC-------eEEEEecCCC--CchhhHHhhhhhcCCccccceeEEEccCCCHH
Q 019795 1 MASEKNILVTGGAGFIGTHCALQLLQGGF-------KVVLIDNLHN--SVPEAVDRVKDLAGPELAKKLEFHVGDLRNKD 71 (335)
Q Consensus 1 ~~~~~~vlItGatG~iG~~l~~~L~~~g~-------~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~ 71 (335)
|.+.|+|+||||+||||++|+..|+++|+ +|+++++.+. ........+.+ ..+.++ .|+.+.+
T Consensus 1 m~~~mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~-------~~~~~~-~di~~~~ 72 (327)
T 1y7t_A 1 MKAPVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELED-------CAFPLL-AGLEATD 72 (327)
T ss_dssp CCCCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHT-------TTCTTE-EEEEEES
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccchhhhhhc-------cccccc-CCeEecc
Confidence 66678999999999999999999999986 8999987431 01111112221 112223 5777666
Q ss_pred HHHHHHhcCCCCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcC-CC-EEEEecccc-ccCCCCCCCcc-CC
Q 019795 72 DLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYN-CK-KLVFSSSAT-IYGQPEKIPCV-ED 147 (335)
Q Consensus 72 ~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~-~~v~~Ss~~-vyg~~~~~~~~-e~ 147 (335)
++.++++ ++|+|||+|+..... ..+...+++.|+.++.++++++++.+ .+ +++++|+.. +. .+.. |.
T Consensus 73 ~~~~a~~--~~D~Vih~Ag~~~~~--~~~~~~~~~~Nv~~t~~l~~a~~~~~~~~~~vvv~snp~~~~-----~~~~~~~ 143 (327)
T 1y7t_A 73 DPKVAFK--DADYALLVGAAPRKA--GMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGNPANTN-----ALIAYKN 143 (327)
T ss_dssp CHHHHTT--TCSEEEECCCCCCCT--TCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHH-----HHHHHHT
T ss_pred ChHHHhC--CCCEEEECCCcCCCC--CCCHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCCchhhh-----HHHHHHH
Confidence 6777787 799999999986432 35667899999999999999999985 54 777777643 11 0111 22
Q ss_pred C-CCCCCChhHHhHHHHHHHHHHHHhhCCCCeEEEEecccccCCCC
Q 019795 148 F-PYGAMNPYGRTKQWCEEIAFDVQKADPEWRIILLRYFNPVGAHE 192 (335)
Q Consensus 148 ~-~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~lR~~~v~G~~~ 192 (335)
. ...|.+.|+.+|..+|++...+++.. +++.+++|+++|||+|.
T Consensus 144 ~~~~~p~~~yg~tkl~~er~~~~~a~~~-g~~~~~vr~~~V~G~h~ 188 (327)
T 1y7t_A 144 APGLNPRNFTAMTRLDHNRAKAQLAKKT-GTGVDRIRRMTVWGNHS 188 (327)
T ss_dssp CTTSCGGGEEECCHHHHHHHHHHHHHHH-TCCGGGEECCEEEBCSS
T ss_pred cCCCChhheeccchHHHHHHHHHHHHHh-CcChhheeeeEEEcCCC
Confidence 2 35566789999999999998888877 99999999999999974
|
| >2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=2.5e-19 Score=168.65 Aligned_cols=170 Identities=19% Similarity=0.259 Sum_probs=132.4
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCe-EEEEecCCCCc---hhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHH
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFK-VVLIDNLHNSV---PEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLF 77 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~---~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~ 77 (335)
..++++|||||+|+||+++++.|+++|+. |++++|+.... ......+... ..++.++.+|++|.+++.+++
T Consensus 224 ~~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~-----g~~v~~~~~Dv~d~~~v~~~~ 298 (486)
T 2fr1_A 224 KPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEAL-----GARTTVAACDVTDRESVRELL 298 (486)
T ss_dssp CCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHT-----TCEEEEEECCTTCHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhc-----CCEEEEEEeCCCCHHHHHHHH
Confidence 35789999999999999999999999985 99999976422 2222233221 257889999999999999999
Q ss_pred hcC----CCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccc-cCCCCCCCccCCC
Q 019795 78 SSQ----KFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATI-YGQPEKIPCVEDF 148 (335)
Q Consensus 78 ~~~----~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~v-yg~~~~~~~~e~~ 148 (335)
+.. .+|+|||+||.... ..+.+.++.++++|+.|+.++.+++...+.++||++||... +|.
T Consensus 299 ~~i~~~g~ld~VIh~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~V~~SS~a~~~g~---------- 368 (486)
T 2fr1_A 299 GGIGDDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELDLTAFVLFSSFASAFGA---------- 368 (486)
T ss_dssp HTSCTTSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSCCSEEEEEEEHHHHTCC----------
T ss_pred HHHHhcCCCcEEEECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhCcCCCCEEEEEcChHhcCCC----------
Confidence 853 56999999997432 22445667889999999999999998888889999999654 432
Q ss_pred CCCCCChhHHhHHHHHHHHHHHHhhCCCCeEEEEecccccCC
Q 019795 149 PYGAMNPYGRTKQWCEEIAFDVQKADPEWRIILLRYFNPVGA 190 (335)
Q Consensus 149 ~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~lR~~~v~G~ 190 (335)
.....|+.+|...+.+..+... . ++++++++|+.+++.
T Consensus 369 --~g~~~Yaaaka~l~~la~~~~~-~-gi~v~~i~pG~~~~~ 406 (486)
T 2fr1_A 369 --PGLGGYAPGNAYLDGLAQQRRS-D-GLPATAVAWGTWAGS 406 (486)
T ss_dssp --TTCTTTHHHHHHHHHHHHHHHH-T-TCCCEEEEECCBC--
T ss_pred --CCCHHHHHHHHHHHHHHHHHHh-c-CCeEEEEECCeeCCC
Confidence 2346899999999988876654 3 899999999988765
|
| >2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae} | Back alignment and structure |
|---|
Probab=99.81 E-value=4e-19 Score=167.90 Aligned_cols=167 Identities=20% Similarity=0.200 Sum_probs=131.3
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCCc---hhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHH
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGF-KVVLIDNLHNSV---PEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLF 77 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~---~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~ 77 (335)
..++++|||||+|+||+++++.|+++|+ +|++++|+.... .+..+.+... ..++.++.+|++|.+++.+++
T Consensus 257 ~~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~-----g~~v~~~~~Dvtd~~~v~~~~ 331 (511)
T 2z5l_A 257 QPSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGH-----GCEVVHAACDVAERDALAALV 331 (511)
T ss_dssp CCCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTT-----TCEEEEEECCSSCHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhc-----CCEEEEEEeCCCCHHHHHHHH
Confidence 3578999999999999999999999998 688899875432 2222333221 257889999999999999999
Q ss_pred hcCCCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHHHHc-CCCEEEEecccc-ccCCCCCCCccCCCCCC
Q 019795 78 SSQKFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAMAKY-NCKKLVFSSSAT-IYGQPEKIPCVEDFPYG 151 (335)
Q Consensus 78 ~~~~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~~-~~~~~v~~Ss~~-vyg~~~~~~~~e~~~~~ 151 (335)
+...+|+|||+||.... ..+.+.++.++++|+.|+.++.+++... +.++||++||.. ++|. .
T Consensus 332 ~~~~ld~VVh~AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~~V~~SS~a~~~g~------------~ 399 (511)
T 2z5l_A 332 TAYPPNAVFHTAGILDDAVIDTLSPESFETVRGAKVCGAELLHQLTADIKGLDAFVLFSSVTGTWGN------------A 399 (511)
T ss_dssp HHSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSCTTCCCEEEEEEGGGTTCC------------T
T ss_pred hcCCCcEEEECCcccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEeCHHhcCCC------------C
Confidence 86679999999997532 2234556678999999999999998776 678999999964 4432 2
Q ss_pred CCChhHHhHHHHHHHHHHHHhhCCCCeEEEEecccc
Q 019795 152 AMNPYGRTKQWCEEIAFDVQKADPEWRIILLRYFNP 187 (335)
Q Consensus 152 ~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~lR~~~v 187 (335)
....|+.+|...+.+++... .. ++++++++|+.+
T Consensus 400 g~~~YaaaKa~ld~la~~~~-~~-gi~v~sv~pG~~ 433 (511)
T 2z5l_A 400 GQGAYAAANAALDALAERRR-AA-GLPATSVAWGLW 433 (511)
T ss_dssp TBHHHHHHHHHHHHHHHHHH-TT-TCCCEEEEECCB
T ss_pred CCHHHHHHHHHHHHHHHHHH-Hc-CCcEEEEECCcc
Confidence 34689999999999988664 33 999999999876
|
| >1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=2.8e-19 Score=159.69 Aligned_cols=166 Identities=19% Similarity=0.175 Sum_probs=124.2
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecC---------CCCchhhHHhhhhhcCCccccceeEEEccCCCHHH
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNL---------HNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDD 72 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~---------~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~ 72 (335)
+++|++|||||+|+||+++++.|+++|++|+++++. ........+.+... . ....+|+++.++
T Consensus 7 l~gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~-------~-~~~~~D~~~~~~ 78 (319)
T 1gz6_A 7 FDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRR-------G-GKAVANYDSVEA 78 (319)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHT-------T-CEEEEECCCGGG
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhh-------C-CeEEEeCCCHHH
Confidence 457899999999999999999999999999998653 22222222233221 1 123579999887
Q ss_pred HHHHHhc-----CCCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHHH----HcCCCEEEEecccc-ccCC
Q 019795 73 LDKLFSS-----QKFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAMA----KYNCKKLVFSSSAT-IYGQ 138 (335)
Q Consensus 73 ~~~~~~~-----~~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~v~~Ss~~-vyg~ 138 (335)
+.++++. .++|+|||+||.... ..+.++++..+++|+.|+.++++++. +.+.++||++||.. .++.
T Consensus 79 ~~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~grIV~vsS~~~~~~~ 158 (319)
T 1gz6_A 79 GEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGN 158 (319)
T ss_dssp HHHHHHHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCC
Confidence 7766543 379999999997432 22456677899999999999999863 44567999999954 4532
Q ss_pred CCCCCccCCCCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccc
Q 019795 139 PEKIPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNP 187 (335)
Q Consensus 139 ~~~~~~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v 187 (335)
.+...|+.||...+.+++.++.+. .++.+.+++|+.+
T Consensus 159 ------------~~~~~Y~aSK~a~~~~~~~la~el~~~gI~vn~v~PG~~ 197 (319)
T 1gz6_A 159 ------------FGQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAG 197 (319)
T ss_dssp ------------TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECC
T ss_pred ------------CCCHHHHHHHHHHHHHHHHHHHHhcccCEEEEEEeCCCc
Confidence 234689999999999999988774 2789999999876
|
| >3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=1.3e-18 Score=163.36 Aligned_cols=168 Identities=18% Similarity=0.236 Sum_probs=132.7
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCCc---hhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQGGF-KVVLIDNLHNSV---PEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS 79 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~---~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~ 79 (335)
++++|||||+|+||.++++.|+++|+ +|++++|+.... .+..+.+... ..++.++.+|++|.+++.++++.
T Consensus 239 ~~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~-----g~~v~~~~~Dvtd~~~v~~~~~~ 313 (496)
T 3mje_A 239 HGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQL-----GVRVTIAACDAADREALAALLAE 313 (496)
T ss_dssp CSEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHT-----TCEEEEEECCTTCHHHHHHHHHT
T ss_pred CCEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhc-----CCeEEEEEccCCCHHHHHHHHHH
Confidence 48999999999999999999999998 788888864332 2222333322 25789999999999999999985
Q ss_pred ----CCCCEEEEccccc-ch----hhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccc-cCCCCCCCccCCCC
Q 019795 80 ----QKFEAVIHFGALK-AV----AESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATI-YGQPEKIPCVEDFP 149 (335)
Q Consensus 80 ----~~~d~vi~~a~~~-~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~v-yg~~~~~~~~e~~~ 149 (335)
..+|+|||+||.. .. ..+.+.++.++++|+.|+.++.+++.....++||++||... +|
T Consensus 314 i~~~g~ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~~~~~iV~~SS~a~~~g------------ 381 (496)
T 3mje_A 314 LPEDAPLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTADLDLDAFVLFSSGAAVWG------------ 381 (496)
T ss_dssp CCTTSCEEEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTSCCSEEEEEEEHHHHTT------------
T ss_pred HHHhCCCeEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEeChHhcCC------------
Confidence 3689999999975 21 22345667899999999999999999888889999999654 33
Q ss_pred CCCCChhHHhHHHHHHHHHHHHhhCCCCeEEEEecccccCC
Q 019795 150 YGAMNPYGRTKQWCEEIAFDVQKADPEWRIILLRYFNPVGA 190 (335)
Q Consensus 150 ~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~lR~~~v~G~ 190 (335)
......|+.+|...+.+.++... . +++++++.|+.+.+.
T Consensus 382 ~~g~~~YaAaKa~ldala~~~~~-~-Gi~v~sV~pG~w~~~ 420 (496)
T 3mje_A 382 SGGQPGYAAANAYLDALAEHRRS-L-GLTASSVAWGTWGEV 420 (496)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHHH-T-TCCCEEEEECEESSS
T ss_pred CCCcHHHHHHHHHHHHHHHHHHh-c-CCeEEEEECCcccCC
Confidence 23346899999999999886654 4 999999999887654
|
| >1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} | Back alignment and structure |
|---|
Probab=99.79 E-value=1.2e-18 Score=149.91 Aligned_cols=165 Identities=15% Similarity=0.054 Sum_probs=117.9
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhCCCeEEEE-e--cCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHH-HHHHhc
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQGGFKVVLI-D--NLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDL-DKLFSS 79 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~-~--r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~-~~~~~~ 79 (335)
+|++|||||+|+||+++++.|+++|++|+++ + |+........+.+ .+.... |..+.+.+ +++.+.
T Consensus 1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~~~~~---------~~~~~~--~~~~v~~~~~~~~~~ 69 (244)
T 1zmo_A 1 MVIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESEN---------PGTIAL--AEQKPERLVDATLQH 69 (244)
T ss_dssp -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHS---------TTEEEC--CCCCGGGHHHHHGGG
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHHHHHh---------CCCccc--CHHHHHHHHHHHHHH
Confidence 5899999999999999999999999999998 5 8643332222211 011111 43333322 223322
Q ss_pred -CCCCEEEEcccccch-------hhhhcChHHHHHHhHHHHHHHHHHHH----HcCCCEEEEeccccccCCCCCCCccCC
Q 019795 80 -QKFEAVIHFGALKAV-------AESVQHPFRYFDNNLIGTINLYQAMA----KYNCKKLVFSSSATIYGQPEKIPCVED 147 (335)
Q Consensus 80 -~~~d~vi~~a~~~~~-------~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~v~~Ss~~vyg~~~~~~~~e~ 147 (335)
.++|+|||+||.... ..+.++++..+++|+.++.++++++. +.+.++||++||...+.
T Consensus 70 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~---------- 139 (244)
T 1zmo_A 70 GEAIDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAGGASVIFITSSVGKK---------- 139 (244)
T ss_dssp SSCEEEEEECCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTS----------
T ss_pred cCCCCEEEECCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhCC----------
Confidence 379999999997533 22345677899999999999999865 44557999999977653
Q ss_pred CCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 148 FPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 148 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
+..+...|+.||...+.+++.++.+. .++++.+++|+.|..+
T Consensus 140 -~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~ 183 (244)
T 1zmo_A 140 -PLAYNPLYGPARAATVALVESAAKTLSRDGILLYAIGPNFFNNP 183 (244)
T ss_dssp -CCTTCTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCBT
T ss_pred -CCCCchHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCC
Confidence 23345689999999999999887763 2789999999988554
|
| >3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A | Back alignment and structure |
|---|
Probab=99.78 E-value=2.2e-18 Score=160.75 Aligned_cols=170 Identities=19% Similarity=0.077 Sum_probs=131.0
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
+++|++|||||+|+||+++++.|+++|++|++++|+... +....+... .++.++.+|++|.++++++++.
T Consensus 211 l~gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~--~~l~~~~~~------~~~~~~~~Dvtd~~~v~~~~~~~~ 282 (454)
T 3u0b_A 211 LDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAA--EDLKRVADK------VGGTALTLDVTADDAVDKITAHVT 282 (454)
T ss_dssp TTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGGH--HHHHHHHHH------HTCEEEECCTTSTTHHHHHHHHHH
T ss_pred CCCCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCccH--HHHHHHHHH------cCCeEEEEecCCHHHHHHHHHHHH
Confidence 367899999999999999999999999999999885321 111222111 2457899999999998888764
Q ss_pred ---C-CCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHHHHc----CCCEEEEeccccccCCCCCCCccCC
Q 019795 80 ---Q-KFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAMAKY----NCKKLVFSSSATIYGQPEKIPCVED 147 (335)
Q Consensus 80 ---~-~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~~v~~Ss~~vyg~~~~~~~~e~ 147 (335)
. .+|+|||+||.... ..+.+.++.++++|+.++.++.+++... +..+||++||...+.
T Consensus 283 ~~~g~~id~lV~nAGv~~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~g~iV~iSS~a~~~---------- 352 (454)
T 3u0b_A 283 EHHGGKVDILVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGEGGRVIGLSSMAGIA---------- 352 (454)
T ss_dssp HHSTTCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCTTCEEEEECCHHHHH----------
T ss_pred HHcCCCceEEEECCcccCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEEeChHhCC----------
Confidence 2 49999999997532 2345667789999999999999998765 457999999966541
Q ss_pred CCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 148 FPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 148 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
+......|+.+|...+.+++.++.+. .++++.++.|+.|..+
T Consensus 353 -g~~g~~~YaasKaal~~l~~~la~e~~~~gI~vn~v~PG~v~T~ 396 (454)
T 3u0b_A 353 -GNRGQTNYATTKAGMIGLAEALAPVLADKGITINAVAPGFIETK 396 (454)
T ss_dssp -CCTTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECSBCC-
T ss_pred -CCCCCHHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEcCcccCh
Confidence 22345689999998888888777652 3899999999988665
|
| >1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=1.3e-17 Score=147.69 Aligned_cols=175 Identities=10% Similarity=-0.014 Sum_probs=120.4
Q ss_pred CCCCeEEEEcCC--ChhhHHHHHHHHhCCCeEEEEecCC-----------CCchhhHHhhhhhcCCccccceeEEEcc--
Q 019795 2 ASEKNILVTGGA--GFIGTHCALQLLQGGFKVVLIDNLH-----------NSVPEAVDRVKDLAGPELAKKLEFHVGD-- 66 (335)
Q Consensus 2 ~~~~~vlItGat--G~iG~~l~~~L~~~g~~V~~~~r~~-----------~~~~~~~~~~~~~~~~~~~~~i~~~~~D-- 66 (335)
+++|++|||||+ |+||++++++|+++|++|++++|++ ...... ..+.. + ........+.+|
T Consensus 6 l~~k~~lVTGas~~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~--~-~~~~~~~~~~~~~~ 81 (297)
T 1d7o_A 6 LRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQS-RVLPD--G-SLMEIKKVYPLDAV 81 (297)
T ss_dssp CTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGG-GBCTT--S-SBCCEEEEEEECTT
T ss_pred cCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEeeccccchhhhhhhhhhHhhhh-hhhcc--c-ccccccccccccee
Confidence 457899999999 9999999999999999999998642 111111 11110 0 000002233333
Q ss_pred ------CC----C--------HHHHHHHHhc-----CCCCEEEEcccccc------hhhhhcChHHHHHHhHHHHHHHHH
Q 019795 67 ------LR----N--------KDDLDKLFSS-----QKFEAVIHFGALKA------VAESVQHPFRYFDNNLIGTINLYQ 117 (335)
Q Consensus 67 ------l~----d--------~~~~~~~~~~-----~~~d~vi~~a~~~~------~~~~~~~~~~~~~~nv~~~~~l~~ 117 (335)
+. | +++++++++. .++|++||+||... ...+.++++..+++|+.++.++++
T Consensus 82 ~~~~~dv~~Dv~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~ 161 (297)
T 1d7o_A 82 FDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLS 161 (297)
T ss_dssp CCSGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred ccchhhhhhhhhccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHHHH
Confidence 22 2 3445555442 37999999998531 223456677899999999999999
Q ss_pred HHHHc--CCCEEEEeccccccCCCCCCCccCCCCCCCC-ChhHHhHHHHHHHHHHHHhhC---CCCeEEEEecccccCCC
Q 019795 118 AMAKY--NCKKLVFSSSATIYGQPEKIPCVEDFPYGAM-NPYGRTKQWCEEIAFDVQKAD---PEWRIILLRYFNPVGAH 191 (335)
Q Consensus 118 ~~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~-~~Y~~sK~~~E~~~~~~~~~~---~~~~~~~lR~~~v~G~~ 191 (335)
++... ..++||++||...+. +.... ..|+.||...+.+++.++.+. .++++.+++|+.|.++.
T Consensus 162 ~~~~~m~~~g~iv~isS~~~~~-----------~~~~~~~~Y~asKaa~~~~~~~la~e~~~~~gi~vn~v~PG~v~T~~ 230 (297)
T 1d7o_A 162 HFLPIMNPGGASISLTYIASER-----------IIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRA 230 (297)
T ss_dssp HHGGGEEEEEEEEEEECGGGTS-----------CCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCC
T ss_pred HHHHHhccCceEEEEecccccc-----------CCCCcchHHHHHHHHHHHHHHHHHHHhCcccCcEEEEEeccccccch
Confidence 98764 125899999976542 12222 479999999999999887662 28999999999998873
|
| >3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae} | Back alignment and structure |
|---|
Probab=99.76 E-value=5.9e-18 Score=160.51 Aligned_cols=167 Identities=16% Similarity=0.175 Sum_probs=128.5
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCe-EEEE-ecCCC-------------CchhhHHhhhhhcCCccccceeEEEccC
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFK-VVLI-DNLHN-------------SVPEAVDRVKDLAGPELAKKLEFHVGDL 67 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~-V~~~-~r~~~-------------~~~~~~~~~~~~~~~~~~~~i~~~~~Dl 67 (335)
+++++|||||+|+||.++++.|+++|+. |+++ +|+.. ...+..+.+... ..++.++.+|+
T Consensus 250 ~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~-----g~~v~~~~~Dv 324 (525)
T 3qp9_A 250 ADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADL-----GATATVVTCDL 324 (525)
T ss_dssp TTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHH-----TCEEEEEECCT
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhc-----CCEEEEEECCC
Confidence 5689999999999999999999999987 5556 77742 233333444332 25789999999
Q ss_pred CCHHHHHHHHhc----CCCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHHHHcC-----CCEEEEecccc
Q 019795 68 RNKDDLDKLFSS----QKFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAMAKYN-----CKKLVFSSSAT 134 (335)
Q Consensus 68 ~d~~~~~~~~~~----~~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-----~~~~v~~Ss~~ 134 (335)
+|.+++.++++. ..+|+|||+||.... ..+.+.++.++++|+.|+.++.+++.... .++||++||..
T Consensus 325 td~~~v~~~~~~i~~~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~~~~iV~~SS~a 404 (525)
T 3qp9_A 325 TDAEAAARLLAGVSDAHPLSAVLHLPPTVDSEPLAATDADALARVVTAKATAALHLDRLLREAAAAGGRPPVLVLFSSVA 404 (525)
T ss_dssp TSHHHHHHHHHTSCTTSCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----CCCEEEEEEEGG
T ss_pred CCHHHHHHHHHHHHhcCCCcEEEECCcCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCEEEEECCHH
Confidence 999999999985 368999999997432 22445677899999999999999987764 67999999966
Q ss_pred ccCCCCCCCccCCCCCCCCChhHHhHHHHHHHHHHHHhhCCCCeEEEEecccc
Q 019795 135 IYGQPEKIPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKADPEWRIILLRYFNP 187 (335)
Q Consensus 135 vyg~~~~~~~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~lR~~~v 187 (335)
.+- +......|+.+|...+.+..++.. . +++++++.|+.+
T Consensus 405 ~~~-----------g~~g~~~YaaaKa~l~~lA~~~~~-~-gi~v~sI~pG~~ 444 (525)
T 3qp9_A 405 AIW-----------GGAGQGAYAAGTAFLDALAGQHRA-D-GPTVTSVAWSPW 444 (525)
T ss_dssp GTT-----------CCTTCHHHHHHHHHHHHHHTSCCS-S-CCEEEEEEECCB
T ss_pred HcC-----------CCCCCHHHHHHHHHHHHHHHHHHh-C-CCCEEEEECCcc
Confidence 531 223346799999999888654432 3 899999999887
|
| >3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=99.73 E-value=1.1e-17 Score=161.74 Aligned_cols=167 Identities=19% Similarity=0.117 Sum_probs=120.9
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEec---------CCCCchhhHHhhhhhcCCccccceeEEEccCCCHHH
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDN---------LHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDD 72 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r---------~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~ 72 (335)
+++|++|||||+|+||+++++.|+++|++|++++| +........+.+.... ....+|++|.++
T Consensus 17 l~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~--------~~~~~D~~d~~~ 88 (613)
T 3oml_A 17 YDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAG--------GEAVADYNSVID 88 (613)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHTT--------CCEEECCCCGGG
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHhC--------CeEEEEeCCHHH
Confidence 56899999999999999999999999999999987 3344444444443321 123479999988
Q ss_pred HHHHHhc-----CCCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHH----HHcCCCEEEEeccccccCCC
Q 019795 73 LDKLFSS-----QKFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAM----AKYNCKKLVFSSSATIYGQP 139 (335)
Q Consensus 73 ~~~~~~~-----~~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~v~~Ss~~vyg~~ 139 (335)
+.++++. .++|++|||||.... ..+.++++.++++|+.|+.++++++ ++.+.++||++||.+.+.
T Consensus 89 ~~~~~~~~~~~~g~iDiLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~~g~IV~isS~a~~~-- 166 (613)
T 3oml_A 89 GAKVIETAIKAFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSSNSGIY-- 166 (613)
T ss_dssp HHHHHC----------CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCHHHHH--
T ss_pred HHHHHHHHHHHCCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcC--
Confidence 8888775 379999999997432 2345677899999999999999987 344557999999965431
Q ss_pred CCCCccCCCCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccc
Q 019795 140 EKIPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNP 187 (335)
Q Consensus 140 ~~~~~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v 187 (335)
+......|+.||...+.+++.++.+. .++.+.++.|+.+
T Consensus 167 ---------~~~~~~~Y~asKaal~~lt~~la~e~~~~gI~vn~v~Pg~~ 207 (613)
T 3oml_A 167 ---------GNFGQVNYTAAKMGLIGLANTVAIEGARNNVLCNVIVPTAA 207 (613)
T ss_dssp ---------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC--
T ss_pred ---------CCCCChHHHHHHHHHHHHHHHHHHHhCccCeEEEEEECCCC
Confidence 22344679999999999999888764 2789999999754
|
| >2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A* | Back alignment and structure |
|---|
Probab=99.72 E-value=3.6e-17 Score=145.98 Aligned_cols=178 Identities=13% Similarity=-0.004 Sum_probs=119.1
Q ss_pred CCCCeEEEEcC--CChhhHHHHHHHHhCCCeEEEEecCCCC-------chhhHHhhhhhcCCccccceeEEEcc------
Q 019795 2 ASEKNILVTGG--AGFIGTHCALQLLQGGFKVVLIDNLHNS-------VPEAVDRVKDLAGPELAKKLEFHVGD------ 66 (335)
Q Consensus 2 ~~~~~vlItGa--tG~iG~~l~~~L~~~g~~V~~~~r~~~~-------~~~~~~~~~~~~~~~~~~~i~~~~~D------ 66 (335)
+++|++||||| +|+||+++++.|+++|++|++++|++.. .....+.+.++..........++.+|
T Consensus 7 l~gk~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 86 (315)
T 2o2s_A 7 LRGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDEDRKLPDGSLIEFAGVYPLDAAFDKP 86 (315)
T ss_dssp CTTCEEEEECCSSSSSHHHHHHHHHHTTTCEEEEEECHHHHHHHHHHHHHTTTHHHHBCTTSCBCCCSCEEECCTTCSST
T ss_pred CCCCEEEEeCCCCCCChHHHHHHHHHHCCCEEEEEecccccchhhhhhhhhhhhhhhhhhcccccccccccccccccccc
Confidence 34689999999 8999999999999999999999874210 00000111111000000012344443
Q ss_pred ------CCC--------HHHHHHHHhc-----CCCCEEEEcccccc------hhhhhcChHHHHHHhHHHHHHHHHHHHH
Q 019795 67 ------LRN--------KDDLDKLFSS-----QKFEAVIHFGALKA------VAESVQHPFRYFDNNLIGTINLYQAMAK 121 (335)
Q Consensus 67 ------l~d--------~~~~~~~~~~-----~~~d~vi~~a~~~~------~~~~~~~~~~~~~~nv~~~~~l~~~~~~ 121 (335)
++| +++++++++. .++|++||+||... ...+.++++..+++|+.++.++++++..
T Consensus 87 ~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~ 166 (315)
T 2o2s_A 87 EDVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVSLLQHFGP 166 (315)
T ss_dssp TSSCHHHHTCGGGSSCCCCSHHHHHHHHHHHHCSEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHST
T ss_pred chhhhhhhcccccccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 332 3455555543 37999999998531 2234456778999999999999999865
Q ss_pred c--CCCEEEEeccccccCCCCCCCccCCCCCCCC-ChhHHhHHHHHHHHHHHHhhC---CCCeEEEEecccccCC
Q 019795 122 Y--NCKKLVFSSSATIYGQPEKIPCVEDFPYGAM-NPYGRTKQWCEEIAFDVQKAD---PEWRIILLRYFNPVGA 190 (335)
Q Consensus 122 ~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~-~~Y~~sK~~~E~~~~~~~~~~---~~~~~~~lR~~~v~G~ 190 (335)
. ..++||++||...+. +.... ..|+.||...+.+++.++.+. .++++.+++|+.|..+
T Consensus 167 ~m~~~g~Iv~isS~~~~~-----------~~~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T~ 230 (315)
T 2o2s_A 167 IMNEGGSAVTLSYLAAER-----------VVPGYGGGMSSAKAALESDTRTLAWEAGQKYGVRVNAISAGPLKSR 230 (315)
T ss_dssp TEEEEEEEEEEEEGGGTS-----------CCTTCCTTHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEECCCCCH
T ss_pred HHhcCCEEEEEecccccc-----------cCCCccHHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEecccccch
Confidence 4 125899999976542 11222 479999999999999887662 3899999999987553
|
| >3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ... | Back alignment and structure |
|---|
Probab=99.70 E-value=7.1e-17 Score=144.89 Aligned_cols=175 Identities=11% Similarity=-0.028 Sum_probs=124.5
Q ss_pred CCCeEEEEcCCC--hhhHHHHHHHHhCCCeEEEEecCC---------CCchhhHHhhhhhcCCccccceeEEEccCCCH-
Q 019795 3 SEKNILVTGGAG--FIGTHCALQLLQGGFKVVLIDNLH---------NSVPEAVDRVKDLAGPELAKKLEFHVGDLRNK- 70 (335)
Q Consensus 3 ~~~~vlItGatG--~iG~~l~~~L~~~g~~V~~~~r~~---------~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~- 70 (335)
++|++|||||++ +||.+++++|+++|++|++.++++ .............. .....+.++.+|+++.
T Consensus 1 ~~k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~~~~~l~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~~Dv~~~~ 78 (329)
T 3lt0_A 1 NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKD--KKMNILDMLPFDASFDT 78 (329)
T ss_dssp CCCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHHHTTTTTGGGBCSSS--CBCCEEEEEECCTTCSS
T ss_pred CCcEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCccccccccchHHHHHHHHHHHhhc--ccccccccccccccccc
Confidence 468999999975 999999999999999999877643 11111111111000 1113467888888876
Q ss_pred -H------------------HHHHHHhc-----CCCCEEEEccccc------chhhhhcChHHHHHHhHHHHHHHHHHHH
Q 019795 71 -D------------------DLDKLFSS-----QKFEAVIHFGALK------AVAESVQHPFRYFDNNLIGTINLYQAMA 120 (335)
Q Consensus 71 -~------------------~~~~~~~~-----~~~d~vi~~a~~~------~~~~~~~~~~~~~~~nv~~~~~l~~~~~ 120 (335)
+ ++.++++. .++|++||+||+. ....+.+.++..+++|+.++.++++++.
T Consensus 79 ~~~~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~ 158 (329)
T 3lt0_A 79 ANDIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFV 158 (329)
T ss_dssp GGGCCHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHG
T ss_pred hhhhhhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence 6 66666654 4799999999863 1222456677899999999999999986
Q ss_pred HcC--CCEEEEeccccccCCCCCCCccCCCCCCCCC-hhHHhHHHHHHHHHHHHhhC---CCCeEEEEecccccCC
Q 019795 121 KYN--CKKLVFSSSATIYGQPEKIPCVEDFPYGAMN-PYGRTKQWCEEIAFDVQKAD---PEWRIILLRYFNPVGA 190 (335)
Q Consensus 121 ~~~--~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~-~Y~~sK~~~E~~~~~~~~~~---~~~~~~~lR~~~v~G~ 190 (335)
..- -.+||++||...+. +..... .|+.||...+.+++.++.+. .++.+.++.|+.|..+
T Consensus 159 p~m~~~g~Iv~isS~~~~~-----------~~~~~~~~Y~asKaal~~~~~~la~el~~~~gI~vn~v~PG~v~T~ 223 (329)
T 3lt0_A 159 NIMKPQSSIISLTYHASQK-----------VVPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSR 223 (329)
T ss_dssp GGEEEEEEEEEEECGGGTS-----------CCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCH
T ss_pred HHHhhCCeEEEEeCccccC-----------CCCcchHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEecceeech
Confidence 541 15899999976541 222333 79999999999998877663 2899999999887543
|
| >2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella} | Back alignment and structure |
|---|
Probab=99.69 E-value=8.3e-17 Score=143.84 Aligned_cols=175 Identities=10% Similarity=-0.047 Sum_probs=105.1
Q ss_pred CCCeEEEEcC--CChhhHHHHHHHHhCCCeEEEEecCC-----------CCchh-----------hHHhhhhhcCCcccc
Q 019795 3 SEKNILVTGG--AGFIGTHCALQLLQGGFKVVLIDNLH-----------NSVPE-----------AVDRVKDLAGPELAK 58 (335)
Q Consensus 3 ~~~~vlItGa--tG~iG~~l~~~L~~~g~~V~~~~r~~-----------~~~~~-----------~~~~~~~~~~~~~~~ 58 (335)
++|++||||| +++||+++++.|+++|++|++++|++ ..... ..+.+..... ...
T Consensus 8 ~~k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 85 (319)
T 2ptg_A 8 RGKTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESSRFEQDSFYAQEPSSKVAAEAAEKPV--DLV 85 (319)
T ss_dssp TTCEEEEECCCCTTSHHHHHHHHHHHTTCEEEEEECHHHHHHHHC----------------------------------C
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEeccccccchhhhhhhhhhhhhhhhhcchhhhHHHHhhhccc--ccc
Confidence 3589999999 89999999999999999999998642 11110 0111110000 000
Q ss_pred ceeEEEcc------------CCC--------HHHHHHHHhc-----CCCCEEEEcccccc------hhhhhcChHHHHHH
Q 019795 59 KLEFHVGD------------LRN--------KDDLDKLFSS-----QKFEAVIHFGALKA------VAESVQHPFRYFDN 107 (335)
Q Consensus 59 ~i~~~~~D------------l~d--------~~~~~~~~~~-----~~~d~vi~~a~~~~------~~~~~~~~~~~~~~ 107 (335)
...++.+| ++| +++++++++. .++|++||+||... ...+.++++.++++
T Consensus 86 ~~~~~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~v 165 (319)
T 2ptg_A 86 FDKIYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVHSLANGPEVTKPLLQTSRKGYLAAVSS 165 (319)
T ss_dssp CSEEEECCTTCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHHHHSCEEEEEEEEECCSSSSSCGGGCCHHHHHHHHHH
T ss_pred ccccccccccccccccccchhcccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCCCccccCCHHHHHHHHhH
Confidence 02344443 222 2345555543 37999999998531 22345567789999
Q ss_pred hHHHHHHHHHHHHHc--CCCEEEEeccccccCCCCCCCccCCCCCCCC-ChhHHhHHHHHHHHHHHHhhC---CCCeEEE
Q 019795 108 NLIGTINLYQAMAKY--NCKKLVFSSSATIYGQPEKIPCVEDFPYGAM-NPYGRTKQWCEEIAFDVQKAD---PEWRIIL 181 (335)
Q Consensus 108 nv~~~~~l~~~~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~-~~Y~~sK~~~E~~~~~~~~~~---~~~~~~~ 181 (335)
|+.++.++++++... ..++||++||...+. +.... ..|+.||...+.+++.++.+. .++++.+
T Consensus 166 N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~-----------~~~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~ 234 (319)
T 2ptg_A 166 SSYSFVSLLQHFLPLMKEGGSALALSYIASEK-----------VIPGYGGGMSSAKAALESDCRTLAFEAGRARAVRVNC 234 (319)
T ss_dssp HTHHHHHHHHHHGGGEEEEEEEEEEEECC-----------------------------THHHHHHHHHHHHHHHCCEEEE
T ss_pred hhHHHHHHHHHHHHHHhcCceEEEEecccccc-----------ccCccchhhHHHHHHHHHHHHHHHHHhccccCeeEEE
Confidence 999999999998764 125899999976541 11222 479999999999999887663 2899999
Q ss_pred EecccccCC
Q 019795 182 LRYFNPVGA 190 (335)
Q Consensus 182 lR~~~v~G~ 190 (335)
++|+.|..+
T Consensus 235 v~PG~v~T~ 243 (319)
T 2ptg_A 235 ISAGPLKSR 243 (319)
T ss_dssp EEECCCC--
T ss_pred EeeCCccCh
Confidence 999988654
|
| >3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A* | Back alignment and structure |
|---|
Probab=99.65 E-value=5e-15 Score=133.41 Aligned_cols=174 Identities=10% Similarity=-0.095 Sum_probs=127.2
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHh-CCCeEEEEecCCCCchh-----------hHH-hhhhhcCCccccceeEEEccCCC
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQ-GGFKVVLIDNLHNSVPE-----------AVD-RVKDLAGPELAKKLEFHVGDLRN 69 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~-~g~~V~~~~r~~~~~~~-----------~~~-~~~~~~~~~~~~~i~~~~~Dl~d 69 (335)
.+|++|||||+++||+++++.|++ .|++|++++|+...... ... .+.. .+ ..+..+.+|++|
T Consensus 46 ~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~-~G----~~a~~i~~Dvtd 120 (405)
T 3zu3_A 46 GPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQ-KG----LYAKSINGDAFS 120 (405)
T ss_dssp CCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHH-TT----CCEEEEESCTTS
T ss_pred CCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHh-cC----CceEEEECCCCC
Confidence 468999999999999999999999 99999999987655431 111 2222 11 467889999999
Q ss_pred HHHHHHHHhc-----CCCCEEEEcccccc--------------------------------------hhhhhcChHHHHH
Q 019795 70 KDDLDKLFSS-----QKFEAVIHFGALKA--------------------------------------VAESVQHPFRYFD 106 (335)
Q Consensus 70 ~~~~~~~~~~-----~~~d~vi~~a~~~~--------------------------------------~~~~~~~~~~~~~ 106 (335)
++++.++++. +++|++||+||... ...+.++++.+++
T Consensus 121 ~~~v~~~v~~i~~~~G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~~~~~i~~~t~ee~~~~v~ 200 (405)
T 3zu3_A 121 DEIKQLTIDAIKQDLGQVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVIKESVLQPATQSEIDSTVA 200 (405)
T ss_dssp HHHHHHHHHHHHHHTSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCCEEEEcCccccccCccccccccccccccccccccccccccccccccccCCCCCHHHHHHHHH
Confidence 9998887764 48999999998731 1124456778888
Q ss_pred HhHHHHH-HHHHHHHHcC----CCEEEEeccccccCCCCCCCccCCCCCCCCChhHHhHHHHHHHHHHHHhhC--C-CCe
Q 019795 107 NNLIGTI-NLYQAMAKYN----CKKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKAD--P-EWR 178 (335)
Q Consensus 107 ~nv~~~~-~l~~~~~~~~----~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~-~~~ 178 (335)
+|..++. .+++++.... -.++|++||....-. .+......|+.+|...+.+.+.++.+. . +++
T Consensus 201 Vn~~~~~~~~~~~~~~~~m~~~gG~IVniSSi~~~~~---------~p~~~~~aY~AaKaal~~ltrsLA~Ela~~~GIR 271 (405)
T 3zu3_A 201 VMGGEDWQMWIDALLDAGVLAEGAQTTAFTYLGEKIT---------HDIYWNGSIGAAKKDLDQKVLAIRESLAAHGGGD 271 (405)
T ss_dssp HHSSHHHHHHHHHHHHHTCEEEEEEEEEEECCCCGGG---------TTTTTTSHHHHHHHHHHHHHHHHHHHHHTTTSCE
T ss_pred hhchhHHHHHHHHHHHHhhhhCCcEEEEEeCchhhCc---------CCCccchHHHHHHHHHHHHHHHHHHHhCcccCeE
Confidence 9988887 6676654321 248999999653210 122222689999999999999988874 3 678
Q ss_pred EEEEecccccCC
Q 019795 179 IILLRYFNPVGA 190 (335)
Q Consensus 179 ~~~lR~~~v~G~ 190 (335)
+.++-|+.+--+
T Consensus 272 VNaVaPG~i~T~ 283 (405)
T 3zu3_A 272 ARVSVLKAVVSQ 283 (405)
T ss_dssp EEEEECCCCCCH
T ss_pred EEEEEeCCCcCc
Confidence 999999877443
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=99.64 E-value=1.3e-15 Score=146.86 Aligned_cols=164 Identities=21% Similarity=0.187 Sum_probs=117.8
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCC---------CCchhhHHhhhhhcCCccccceeEEEccCCCHHH
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLH---------NSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDD 72 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~---------~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~ 72 (335)
+++|+++||||+++||+++++.|+++|++|++.+|+. .......+.+.... .. ..+|+.|.++
T Consensus 6 l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g-----~~---~~~d~~d~~~ 77 (604)
T 2et6_A 6 FKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNG-----GV---AVADYNNVLD 77 (604)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHTT-----CE---EEEECCCTTC
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhcC-----Ce---EEEEcCCHHH
Confidence 3568999999999999999999999999999998754 22222233332211 12 2357776654
Q ss_pred HHHHHhc-----CCCCEEEEcccccc----hhhhhcChHHHHHHhHHHHHHHHHHHH----HcCCCEEEEeccccc-cCC
Q 019795 73 LDKLFSS-----QKFEAVIHFGALKA----VAESVQHPFRYFDNNLIGTINLYQAMA----KYNCKKLVFSSSATI-YGQ 138 (335)
Q Consensus 73 ~~~~~~~-----~~~d~vi~~a~~~~----~~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~v~~Ss~~v-yg~ 138 (335)
++++++. +++|++|||||+.. ...+.++++.++++|+.|+.++++++. +.+-.+||++||... ++
T Consensus 78 ~~~~v~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~G~IVnisS~ag~~~- 156 (604)
T 2et6_A 78 GDKIVETAVKNFGTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPAGLYG- 156 (604)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHC-
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCC-
Confidence 4444332 48999999999742 223456788999999999999999854 344569999999653 32
Q ss_pred CCCCCccCCCCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecc
Q 019795 139 PEKIPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYF 185 (335)
Q Consensus 139 ~~~~~~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~ 185 (335)
......|+.||.....+.+.++.+. .++++.++.|+
T Consensus 157 -----------~~~~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~Pg 194 (604)
T 2et6_A 157 -----------NFGQANYASAKSALLGFAETLAKEGAKYNIKANAIAPL 194 (604)
T ss_dssp -----------CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC
T ss_pred -----------CCCchHHHHHHHHHHHHHHHHHHHhCccCeEEEEEccC
Confidence 1233579999999999999888773 27899999995
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=99.64 E-value=2.1e-15 Score=145.32 Aligned_cols=166 Identities=16% Similarity=0.140 Sum_probs=121.4
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccC-CCHHHH-HHHHhc
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDL-RNKDDL-DKLFSS 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl-~d~~~~-~~~~~~ 79 (335)
+++|+++||||+++||+++++.|+++|++|++.++. ......+.+.+.. ..+..+.+|+ .+.+.+ +++.+.
T Consensus 320 l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~--~~~~~~~~i~~~g-----~~~~~~~~Dv~~~~~~~~~~~~~~ 392 (604)
T 2et6_A 320 LKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFK--DATKTVDEIKAAG-----GEAWPDQHDVAKDSEAIIKNVIDK 392 (604)
T ss_dssp CTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSS--CCHHHHHHHHHTT-----CEEEEECCCHHHHHHHHHHHHHHH
T ss_pred cCCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCc--cHHHHHHHHHhcC-----CeEEEEEcChHHHHHHHHHHHHHh
Confidence 456899999999999999999999999999998863 2334444443321 3466677888 554432 223222
Q ss_pred -CCCCEEEEcccccc----hhhhhcChHHHHHHhHHHHHHHHHHHHH----cCCCEEEEeccccccCCCCCCCccCCCCC
Q 019795 80 -QKFEAVIHFGALKA----VAESVQHPFRYFDNNLIGTINLYQAMAK----YNCKKLVFSSSATIYGQPEKIPCVEDFPY 150 (335)
Q Consensus 80 -~~~d~vi~~a~~~~----~~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~ 150 (335)
+++|++|||||+.. ...+.++++.++++|+.|+.++++++.. .+-.+||++||....- +.
T Consensus 393 ~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~ag~~-----------~~ 461 (604)
T 2et6_A 393 YGTIDILVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTSGIY-----------GN 461 (604)
T ss_dssp HSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHS-----------CC
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhcc-----------CC
Confidence 48999999999742 2234567889999999999999998643 3446999999965431 12
Q ss_pred CCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecc
Q 019795 151 GAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYF 185 (335)
Q Consensus 151 ~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~ 185 (335)
.....|+.||.....+.+.++.+. .++++.++.|+
T Consensus 462 ~~~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~PG 498 (604)
T 2et6_A 462 FGQANYSSSKAGILGLSKTMAIEGAKNNIKVNIVAPH 498 (604)
T ss_dssp TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC
T ss_pred CCChhHHHHHHHHHHHHHHHHHHhCccCeEEEEEcCC
Confidence 234579999999999999888763 27899999997
|
| >3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} | Back alignment and structure |
|---|
Probab=99.63 E-value=2.8e-15 Score=148.78 Aligned_cols=168 Identities=20% Similarity=0.288 Sum_probs=129.4
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHH-hCCC-eEEEEecCCCC---chhhHHhhhhhcCCccccceeEEEccCCCHHHHHHH
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLL-QGGF-KVVLIDNLHNS---VPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKL 76 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~-~~g~-~V~~~~r~~~~---~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~ 76 (335)
.+++++|||||+|.||+++++.|+ ++|+ +|++++|+... ..+..+.+... ..++.++.+|++|+++++++
T Consensus 528 ~~~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~-----G~~v~~~~~Dvsd~~~v~~~ 602 (795)
T 3slk_A 528 DAAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAY-----GAEVSLQACDVADRETLAKV 602 (795)
T ss_dssp CTTSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHHT-----TCEEEEEECCTTCHHHHHHH
T ss_pred ccccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHhc-----CCcEEEEEeecCCHHHHHHH
Confidence 357899999999999999999999 7898 58999998433 33333344332 25789999999999999999
Q ss_pred HhcC----CCCEEEEcccccc----hhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccCCCCCCCccCCC
Q 019795 77 FSSQ----KFEAVIHFGALKA----VAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQPEKIPCVEDF 148 (335)
Q Consensus 77 ~~~~----~~d~vi~~a~~~~----~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~ 148 (335)
++.. .+|+|||+|+... ...+.++++..+++|+.|+.++.+++.. .. +||++||.+.+-
T Consensus 603 ~~~~~~~~~id~lVnnAGv~~~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~~-~l-~iV~~SS~ag~~----------- 669 (795)
T 3slk_A 603 LASIPDEHPLTAVVHAAGVLDDGVSESLTVERLDQVLRPKVDGARNLLELIDP-DV-ALVLFSSVSGVL----------- 669 (795)
T ss_dssp HHTSCTTSCEEEEEECCCCCCCCCGGGCCHHHHHHHHCCCCCHHHHHHHHSCT-TS-EEEEEEETHHHH-----------
T ss_pred HHHHHHhCCCEEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHhh-CC-EEEEEccHHhcC-----------
Confidence 8753 6899999999742 2334567788999999999999998733 23 899999965431
Q ss_pred CCCCCChhHHhHHHHHHHHHHHHhhCCCCeEEEEecccccC
Q 019795 149 PYGAMNPYGRTKQWCEEIAFDVQKADPEWRIILLRYFNPVG 189 (335)
Q Consensus 149 ~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~lR~~~v~G 189 (335)
.......|+.+|...+.+.++.... |+++.++-|+.+-.
T Consensus 670 g~~g~~~YaAaka~~~alA~~~~~~--Gi~v~sI~pG~v~t 708 (795)
T 3slk_A 670 GSGGQGNYAAANSFLDALAQQRQSR--GLPTRSLAWGPWAE 708 (795)
T ss_dssp TCSSCHHHHHHHHHHHHHHHHHHHT--TCCEEEEEECCCSC
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHc--CCeEEEEECCeECc
Confidence 2233468999999888888766554 99999999987643
|
| >3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV} | Back alignment and structure |
|---|
Probab=99.62 E-value=4.5e-15 Score=134.88 Aligned_cols=174 Identities=13% Similarity=-0.049 Sum_probs=125.4
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHh-CCCeEEEEecCCCCchhh------------HHhhhhhcCCccccceeEEEccCCC
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQ-GGFKVVLIDNLHNSVPEA------------VDRVKDLAGPELAKKLEFHVGDLRN 69 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~-~g~~V~~~~r~~~~~~~~------------~~~~~~~~~~~~~~~i~~~~~Dl~d 69 (335)
.+|++|||||+++||+++++.|++ .|++|++++|+....... .+.+... + .....+.+|++|
T Consensus 60 ~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~-G----~~a~~i~~Dvtd 134 (422)
T 3s8m_A 60 GPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAA-G----LYSKSINGDAFS 134 (422)
T ss_dssp SCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHT-T----CCEEEEESCTTS
T ss_pred CCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhc-C----CcEEEEEecCCC
Confidence 478999999999999999999999 999999999876654321 1222221 1 467889999999
Q ss_pred HHHHHHHHhc------CCCCEEEEccccc----------------ch----------------------hhhhcChHHHH
Q 019795 70 KDDLDKLFSS------QKFEAVIHFGALK----------------AV----------------------AESVQHPFRYF 105 (335)
Q Consensus 70 ~~~~~~~~~~------~~~d~vi~~a~~~----------------~~----------------------~~~~~~~~~~~ 105 (335)
+++++++++. +++|++||+||.. .. ..+.++++.++
T Consensus 135 ~~~v~~~v~~i~~~~~G~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~v 214 (422)
T 3s8m_A 135 DAARAQVIELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTIIQASIEPASAQEIEDTI 214 (422)
T ss_dssp HHHHHHHHHHHHHHSCSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCCCEEEEcCccccccccccccccccccccccccccccccccccccccccccCCCCHHHHHHHH
Confidence 9988877653 4799999999862 00 12344566777
Q ss_pred HHhHHHHH-HHHHHHHHcC----CCEEEEeccccccCCCCCCCccCCCCCCCCChhHHhHHHHHHHHHHHHhhC--CCCe
Q 019795 106 DNNLIGTI-NLYQAMAKYN----CKKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWR 178 (335)
Q Consensus 106 ~~nv~~~~-~l~~~~~~~~----~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~ 178 (335)
++|..++. .+++++.... -.++|++||....-. .|......|+.||...+.+.+.++.+. .+++
T Consensus 215 ~Vn~~~~~~~~~~a~~~~~m~~~gG~IVniSSi~g~~~---------~p~~~~~aY~ASKaAl~~lTrsLA~Ela~~GIR 285 (422)
T 3s8m_A 215 TVMGGQDWELWIDALEGAGVLADGARSVAFSYIGTEIT---------WPIYWHGALGKAKVDLDRTAQRLNARLAKHGGG 285 (422)
T ss_dssp HHHSSHHHHHHHHHHHHTTCEEEEEEEEEEEECCCGGG---------HHHHTSHHHHHHHHHHHHHHHHHHHHHHTTTCE
T ss_pred HhhchhHHHHHHHHHHHHHHhhCCCEEEEEeCchhhcc---------CCCccchHHHHHHHHHHHHHHHHHHHhCccCEE
Confidence 77877775 6777665432 248999999653210 011122579999999999999888773 2899
Q ss_pred EEEEecccccCC
Q 019795 179 IILLRYFNPVGA 190 (335)
Q Consensus 179 ~~~lR~~~v~G~ 190 (335)
+.++.|+.|--+
T Consensus 286 VNaVaPG~i~T~ 297 (422)
T 3s8m_A 286 ANVAVLKSVVTQ 297 (422)
T ss_dssp EEEEEECCCCCT
T ss_pred EEEEEcCCCcCh
Confidence 999999887554
|
| >2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A* | Back alignment and structure |
|---|
Probab=99.62 E-value=5.8e-15 Score=154.03 Aligned_cols=174 Identities=18% Similarity=0.150 Sum_probs=128.0
Q ss_pred CCCCeEEEEcCCCh-hhHHHHHHHHhCCCeEEEEe-cCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc
Q 019795 2 ASEKNILVTGGAGF-IGTHCALQLLQGGFKVVLID-NLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS 79 (335)
Q Consensus 2 ~~~~~vlItGatG~-iG~~l~~~L~~~g~~V~~~~-r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~ 79 (335)
+++|++|||||+++ ||+++++.|++.|++|++++ |+........+.+....+ .....+.++.+|++|.+++.++++.
T Consensus 673 l~gKvaLVTGASsGgIG~aIA~~La~~GA~Vvl~~~R~~~~l~~~~~eL~~~~~-~~g~~v~~v~~DVsd~~sV~alv~~ 751 (1887)
T 2uv8_A 673 FKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYG-AKGSTLIVVPFNQGSKQDVEALIEF 751 (1887)
T ss_dssp CTTCEEEEESCCSSSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHC-CTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCCHHHHHHHHHHHHHHhh-cCCCeEEEEEecCCCHHHHHHHHHH
Confidence 46789999999999 99999999999999999984 544433333333322111 0125688999999999999888762
Q ss_pred ---------C--CCCEEEEcccccchh-----hh--hcChHHHHHHhHHHHHHHHHHHHHcC------CCEEEEeccccc
Q 019795 80 ---------Q--KFEAVIHFGALKAVA-----ES--VQHPFRYFDNNLIGTINLYQAMAKYN------CKKLVFSSSATI 135 (335)
Q Consensus 80 ---------~--~~d~vi~~a~~~~~~-----~~--~~~~~~~~~~nv~~~~~l~~~~~~~~------~~~~v~~Ss~~v 135 (335)
. .+|++|||||+.... .+ .+.++.++++|+.++..++++++... .++||++||...
T Consensus 752 i~~~~~~~G~G~~LDiLVNNAGi~~~~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~m~~~~~G~IVnISS~ag 831 (1887)
T 2uv8_A 752 IYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNHG 831 (1887)
T ss_dssp HHSCTTTTSCCCCCSEEEECCCCCCCSBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCCSCCEEEEEEECSCTT
T ss_pred HHHhccccccCCCCeEEEECCCcCCCCCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhCCCCEEEEEcChHh
Confidence 1 599999999975322 12 45567899999999999999874321 258999999654
Q ss_pred cCCCCCCCccCCCCCCCCChhHHhHHHHHHH-HHHHHhhCC-CCeEEEEecccccC
Q 019795 136 YGQPEKIPCVEDFPYGAMNPYGRTKQWCEEI-AFDVQKADP-EWRIILLRYFNPVG 189 (335)
Q Consensus 136 yg~~~~~~~~e~~~~~~~~~Y~~sK~~~E~~-~~~~~~~~~-~~~~~~lR~~~v~G 189 (335)
+. + ....|+.||...+.+ .+.++.++. .+++.++.||.+.+
T Consensus 832 ~~-----------g--g~~aYaASKAAL~~Lttr~lA~ela~~IrVNaV~PG~V~t 874 (1887)
T 2uv8_A 832 TF-----------G--GDGMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRG 874 (1887)
T ss_dssp CS-----------S--CBTTHHHHHHHGGGHHHHHHHSSCTTTEEEEEEEECCEEC
T ss_pred cc-----------C--CCchHHHHHHHHHHHHHHHHHHHhCCCeEEEEEEeccccc
Confidence 31 1 235799999999998 666666542 38899999998874
|
| >2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.61 E-value=1.2e-15 Score=154.54 Aligned_cols=174 Identities=18% Similarity=0.143 Sum_probs=125.5
Q ss_pred CCCCeEEEEcCCCh-hhHHHHHHHHhCCCeEEEE-ecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc
Q 019795 2 ASEKNILVTGGAGF-IGTHCALQLLQGGFKVVLI-DNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS 79 (335)
Q Consensus 2 ~~~~~vlItGatG~-iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~ 79 (335)
+++|++|||||+|+ ||+++++.|+++|++|+++ +|+........+.+....+ .....+.++.+|++|.+++.++++.
T Consensus 474 L~GKvALVTGASgGGIGrAIAr~LA~~GA~VVL~~~R~~e~lee~a~eL~ael~-a~Ga~V~vV~~DVTD~esVeaLVe~ 552 (1688)
T 2pff_A 474 FKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYG-AKGSTLIVVPFNQGSKQDVEALIEF 552 (1688)
T ss_dssp CCSCCEEECSCSSSSTHHHHHHHHHHHTCEEEEEESSCSTTTTTHHHHTTTTTC-CTTCEEEEEECCSSSTTHHHHHHHH
T ss_pred cCCCEEEEECCChHHHHHHHHHHHHHCcCEEEEEeCCCHHHHHHHHHHHHHHhh-cCCCeEEEEEeCCCCHHHHHHHHHH
Confidence 45789999999998 9999999999999999998 5655554444444422111 1124688999999999998887763
Q ss_pred ---------C--CCCEEEEcccccchh-----hh--hcChHHHHHHhHHHHHHHHHHHHH--c----CCCEEEEeccccc
Q 019795 80 ---------Q--KFEAVIHFGALKAVA-----ES--VQHPFRYFDNNLIGTINLYQAMAK--Y----NCKKLVFSSSATI 135 (335)
Q Consensus 80 ---------~--~~d~vi~~a~~~~~~-----~~--~~~~~~~~~~nv~~~~~l~~~~~~--~----~~~~~v~~Ss~~v 135 (335)
. .+|+|||+||+.... .+ .+.++.++++|+.++.+++++++. . +..+||++||...
T Consensus 553 I~e~~~~~GfG~~IDILVNNAGI~~~g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M~krggGrIVnISSiAG 632 (1688)
T 2pff_A 553 IYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNHG 632 (1688)
T ss_dssp HHSCTTSSSCCCCCCEEECCCCCCCCSBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHHHHTCTTSCEEECCCCCSCTT
T ss_pred HHHhccccccCCCCeEEEECCCcCCCCCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHhChHHHhCCCCEEEEEEChHh
Confidence 1 599999999974322 12 455678999999999999998732 2 1248999999653
Q ss_pred cCCCCCCCccCCCCCCCCChhHHhHHHHHHH-HHHHHhhC-CCCeEEEEecccccC
Q 019795 136 YGQPEKIPCVEDFPYGAMNPYGRTKQWCEEI-AFDVQKAD-PEWRIILLRYFNPVG 189 (335)
Q Consensus 136 yg~~~~~~~~e~~~~~~~~~Y~~sK~~~E~~-~~~~~~~~-~~~~~~~lR~~~v~G 189 (335)
.. + ....|+.||...+.+ .+.++.+. +.+++.++.|+.+-+
T Consensus 633 ~~-----------G--g~saYaASKAAL~aLttrsLAeEla~~IRVNaVaPG~V~T 675 (1688)
T 2pff_A 633 TF-----------G--GDGMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRG 675 (1688)
T ss_dssp TS-----------S--CBTTHHHHHHHHTHHHHHTTTSSCTTTEECCCCCCCCCCC
T ss_pred cc-----------C--CchHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEECcCcC
Confidence 21 1 235799999999998 44444443 137777888888764
|
| >4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A* | Back alignment and structure |
|---|
Probab=99.60 E-value=2.6e-14 Score=130.82 Aligned_cols=176 Identities=10% Similarity=-0.042 Sum_probs=124.6
Q ss_pred CCCCeEEEEcCCChhhHH--HHHHHHhCCCeEEEEecCCCCch-----------hhHHhhhhhcCCccccceeEEEccCC
Q 019795 2 ASEKNILVTGGAGFIGTH--CALQLLQGGFKVVLIDNLHNSVP-----------EAVDRVKDLAGPELAKKLEFHVGDLR 68 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~--l~~~L~~~g~~V~~~~r~~~~~~-----------~~~~~~~~~~~~~~~~~i~~~~~Dl~ 68 (335)
..+|++|||||+++||.+ +++.|+++|++|++++|+..... +....+.+.. +..+..+.+|++
T Consensus 58 ~~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~----g~~~~~~~~Dvt 133 (418)
T 4eue_A 58 RGPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKK----GLVAKNFIEDAF 133 (418)
T ss_dssp CCCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHT----TCCEEEEESCTT
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHc----CCcEEEEEeeCC
Confidence 357999999999999999 99999999999999999765432 2222222211 256888999999
Q ss_pred CHHHHHHHHhc-----CCCCEEEEcccccc----------------h----------------------hhhhcChHHHH
Q 019795 69 NKDDLDKLFSS-----QKFEAVIHFGALKA----------------V----------------------AESVQHPFRYF 105 (335)
Q Consensus 69 d~~~~~~~~~~-----~~~d~vi~~a~~~~----------------~----------------------~~~~~~~~~~~ 105 (335)
|+++++++++. +++|++||+||... . ..+.++++.++
T Consensus 134 d~~~v~~~v~~i~~~~G~IDiLVnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~~ 213 (418)
T 4eue_A 134 SNETKDKVIKYIKDEFGKIDLFVYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTIDVERDEITLKKVSSASIEEIEETR 213 (418)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCBSSSCEEEEEEETTTTEEEEEEECBCCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCcccccccccccccccccccccccccccccccccccccccccccCCCHHHHHHHH
Confidence 99988887764 47999999998730 0 11344555677
Q ss_pred HHhHHHHH-HHHHHHHHcC----CCEEEEeccccccCCCCCCCccCCCCCCCCChhHHhHHHHHHHHHHHHhhC---CCC
Q 019795 106 DNNLIGTI-NLYQAMAKYN----CKKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKAD---PEW 177 (335)
Q Consensus 106 ~~nv~~~~-~l~~~~~~~~----~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~ 177 (335)
++|..+.. .+++++.... -.++|++||....- ..|......|+.+|...+.+.+.++.+. .++
T Consensus 214 ~vn~~~~~~~~~~~l~~~~~~~~gg~IV~iSSi~~~~---------~~p~~~~~aY~ASKaAL~~ltrsLA~ELa~~~GI 284 (418)
T 4eue_A 214 KVMGGEDWQEWCEELLYEDCFSDKATTIAYSYIGSPR---------TYKIYREGTIGIAKKDLEDKAKLINEKLNRVIGG 284 (418)
T ss_dssp HHHSSHHHHHHHHHHHHTTCEEEEEEEEEEECCCCGG---------GTTTTTTSHHHHHHHHHHHHHHHHHHHHHHHHSC
T ss_pred HHhhHHHHHHHHHHHHHHhhhcCCcEEEEEeCchhcC---------CCCccccHHHHHHHHHHHHHHHHHHHHhCCccCe
Confidence 77777666 6666655432 24799999865321 0122223689999999999999888763 168
Q ss_pred eEEEEecccccCC
Q 019795 178 RIILLRYFNPVGA 190 (335)
Q Consensus 178 ~~~~lR~~~v~G~ 190 (335)
++.++.|+.|--+
T Consensus 285 rVN~V~PG~v~T~ 297 (418)
T 4eue_A 285 RAFVSVNKALVTK 297 (418)
T ss_dssp EEEEEECCCCCCH
T ss_pred EEEEEECCcCcCh
Confidence 9999999877543
|
| >2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A* | Back alignment and structure |
|---|
Probab=99.58 E-value=1.6e-14 Score=150.47 Aligned_cols=173 Identities=18% Similarity=0.110 Sum_probs=124.8
Q ss_pred CCCCeEEEEcCCCh-hhHHHHHHHHhCCCeEEEEec-CCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc
Q 019795 2 ASEKNILVTGGAGF-IGTHCALQLLQGGFKVVLIDN-LHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS 79 (335)
Q Consensus 2 ~~~~~vlItGatG~-iG~~l~~~L~~~g~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~ 79 (335)
+++|+||||||+|+ ||.++++.|++.|++|+++++ +..........+..... .....+.++.+|++|.+++.++++.
T Consensus 650 L~gKvaLVTGASgGgIG~aIAr~LA~~GA~VVl~~~R~~~~l~~~a~eL~~el~-~~G~~v~~v~~DVsd~esV~alv~~ 728 (1878)
T 2uv9_A 650 FQGKHALMTGAGAGSIGAEVLQGLLSGGAKVIVTTSRFSRQVTEYYQGIYARCG-ARGSQLVVVPFNQGSKQDVEALVNY 728 (1878)
T ss_dssp CTTCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHC-CTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCChHHHHHHHHHHHHHhh-ccCCeEEEEEcCCCCHHHHHHHHHH
Confidence 46789999999999 999999999999999999864 33333233333322111 0125688999999999999988763
Q ss_pred -------C--CCCEEEEcccccchh-----hh--hcChHHHHHHhHHHHHHHHHHHHH--c----CCCEEEEeccccccC
Q 019795 80 -------Q--KFEAVIHFGALKAVA-----ES--VQHPFRYFDNNLIGTINLYQAMAK--Y----NCKKLVFSSSATIYG 137 (335)
Q Consensus 80 -------~--~~d~vi~~a~~~~~~-----~~--~~~~~~~~~~nv~~~~~l~~~~~~--~----~~~~~v~~Ss~~vyg 137 (335)
. .+|+||||||+.... .+ .+.++.++++|+.++.++++.++. . +.++||++||...+.
T Consensus 729 i~~~~~~~G~~IDiLVnNAGi~~~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M~~~~~G~IVnISS~ag~~ 808 (1878)
T 2uv9_A 729 IYDTKNGLGWDLDYVVPFAAIPENGREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERGYETRPAQVILPLSPNHGTF 808 (1878)
T ss_dssp HHCSSSSCCCCCSEEEECCCCCCTTCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCSCCEEECCEECSCSSSS
T ss_pred HHHhhcccCCCCcEEEeCcccccCCCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhCCCCEEEEEcchhhcc
Confidence 2 599999999975332 11 355678999999999999877432 1 225899999965321
Q ss_pred CCCCCCccCCCCCCCCChhHHhHHHHHHHHHHHHhh-C-CCCeEEEEeccccc
Q 019795 138 QPEKIPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKA-D-PEWRIILLRYFNPV 188 (335)
Q Consensus 138 ~~~~~~~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~-~-~~~~~~~lR~~~v~ 188 (335)
+ ....|+.+|...+.+++.+..+ . +.+++.++.||.+-
T Consensus 809 -----------g--g~~aYaASKAAL~aLt~~laAeEla~~IrVNaVaPG~V~ 848 (1878)
T 2uv9_A 809 -----------G--NDGLYSESKLALETLFNRWYSESWGNYLTICGAVIGWTR 848 (1878)
T ss_dssp -----------S--CCSSHHHHHHHHTTHHHHHHHSTTTTTEEEEEEEECCBC
T ss_pred -----------C--CchHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEeccee
Confidence 1 2357999999999988765543 2 24889999998876
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* | Back alignment and structure |
|---|
Probab=99.43 E-value=9.9e-13 Score=143.81 Aligned_cols=170 Identities=15% Similarity=0.117 Sum_probs=120.6
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCe-EEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFK-VVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
.+|++|||||+|+||+++++.|+++|++ |++++|+..........+..+.. ...++.++.+|++|.++++++++.
T Consensus 1883 ~~k~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~--~g~~v~~~~~Dvsd~~~v~~~~~~~~ 1960 (2512)
T 2vz8_A 1883 PHKSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRR--QGVQVLVSTSNASSLDGARSLITEAT 1960 (2512)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHHHHHHHHHH--TTCEEEEECCCSSSHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHHHHHHHHHh--CCCEEEEEecCCCCHHHHHHHHHHHH
Confidence 5789999999999999999999999987 77788876655332222222110 115688899999999998887764
Q ss_pred --CCCCEEEEcccccc----hhhhhcChHHHHHHhHHHHHHHHHHHHHc--CCCEEEEeccccccCCCCCCCccCCCCCC
Q 019795 80 --QKFEAVIHFGALKA----VAESVQHPFRYFDNNLIGTINLYQAMAKY--NCKKLVFSSSATIYGQPEKIPCVEDFPYG 151 (335)
Q Consensus 80 --~~~d~vi~~a~~~~----~~~~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~ 151 (335)
..+|+|||+|+... ...+.++++..+++|+.|+.++.+++... ..++||++||.+..- +..
T Consensus 1961 ~~g~id~lVnnAgv~~~~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~~g~iV~iSS~ag~~-----------g~~ 2029 (2512)
T 2vz8_A 1961 QLGPVGGVFNLAMVLRDAVLENQTPEFFQDVSKPKYSGTANLDRVTREACPELDYFVIFSSVSCGR-----------GNA 2029 (2512)
T ss_dssp HHSCEEEEEECCCC----------------CTTTTHHHHHHHHHHHHHHCTTCCEEEEECCHHHHT-----------TCT
T ss_pred hcCCCcEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCEEEEecchhhcC-----------CCC
Confidence 47999999999742 22345677789999999999998887654 346999999965431 122
Q ss_pred CCChhHHhHHHHHHHHHHHHhhCCCCeEEEEecccc
Q 019795 152 AMNPYGRTKQWCEEIAFDVQKADPEWRIILLRYFNP 187 (335)
Q Consensus 152 ~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~lR~~~v 187 (335)
....|+.+|...+.+++....+ |++...+-.+.+
T Consensus 2030 g~~~Y~aaKaal~~l~~~rr~~--Gl~~~a~~~g~~ 2063 (2512)
T 2vz8_A 2030 GQANYGFANSAMERICEKRRHD--GLPGLAVQWGAI 2063 (2512)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHT--TSCCCEEEECCB
T ss_pred CcHHHHHHHHHHHHHHHHHHHC--CCcEEEEEccCc
Confidence 3457999999999999865544 888877777654
|
| >3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A* | Back alignment and structure |
|---|
Probab=99.32 E-value=2.4e-11 Score=133.11 Aligned_cols=176 Identities=16% Similarity=0.107 Sum_probs=118.4
Q ss_pred CCCCeEEEEcCCCh-hhHHHHHHHHhCCCeEEEEecCCCCc-hhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc
Q 019795 2 ASEKNILVTGGAGF-IGTHCALQLLQGGFKVVLIDNLHNSV-PEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS 79 (335)
Q Consensus 2 ~~~~~vlItGatG~-iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~ 79 (335)
+++|++|||||+++ ||+++++.|++.|++|++++|+.... ....+.+.+... .....+..+.+|++|+++++++++.
T Consensus 2134 l~gKvaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~~~~~~l~~~l~-~~G~~~~~v~~Dvtd~~~v~~lv~~ 2212 (3089)
T 3zen_D 2134 XXDEVAVVTGASKGSIAASVVGQLLDGGATVIATTSRLDDDRLAFYKQLYRDHA-RFDATLWVVPANMASYSDIDKLVEW 2212 (3089)
T ss_dssp CCCCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHHHHHHHHHHHHC-CTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred CCCCEEEEeCCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhhHHHHHHHHHHh-hcCCeEEEEEecCCCHHHHHHHHHH
Confidence 57899999999999 99999999999999999999876541 111122211111 1124678899999999998887652
Q ss_pred ---------CCCCEEEEcccc----cc-----hhhhhcChH----HHHHHhHHHHHHHHHHHHH----cCCC---EEEEe
Q 019795 80 ---------QKFEAVIHFGAL----KA-----VAESVQHPF----RYFDNNLIGTINLYQAMAK----YNCK---KLVFS 130 (335)
Q Consensus 80 ---------~~~d~vi~~a~~----~~-----~~~~~~~~~----~~~~~nv~~~~~l~~~~~~----~~~~---~~v~~ 130 (335)
+++|++|||||. .. ...+.++++ ..+++|+.++..+++++.. .+.. .+|..
T Consensus 2213 i~~~~~~~fG~IDILVNNAGi~d~~~~~a~~~~~~~~e~~~~~~e~~~~vnl~~~~~l~~~~~~~m~~~~~g~~~~ii~~ 2292 (3089)
T 3zen_D 2213 VGTEQTESLGPQSIHLKDAQTPTLLFPFAAPRVAGDMSEVGSRAEMEMKVLLWAVQRLISGLSKIGAERDIASRLHVVLP 2292 (3089)
T ss_dssp HTSCCEEEESSSEEEECCCCCCSEEEECCCCCCCCTTSCTTSHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCCEEEEEE
T ss_pred HHhhhhhhcCCCCEEEECCCcccccCcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceeEEEEE
Confidence 368999999997 11 111223333 3488999999988887643 2221 22222
Q ss_pred ccccccCCCCCCCccCCCCCCCCChhHHhHHHHHHHHHHHHhh--C-CCCeEEEEecccccCC
Q 019795 131 SSATIYGQPEKIPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKA--D-PEWRIILLRYFNPVGA 190 (335)
Q Consensus 131 Ss~~vyg~~~~~~~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~--~-~~~~~~~lR~~~v~G~ 190 (335)
+|. ..+ .......|+.||...+.+++.++.+ + +++.+..+.||.|-+.
T Consensus 2293 ~ss-~~g-----------~~g~~~aYsASKaAl~~LtrslA~E~~~a~~IrVn~v~PG~v~tT 2343 (3089)
T 3zen_D 2293 GSP-NRG-----------MFGGDGAYGEAKSALDALENRWSAEKSWAERVSLAHALIGWTKGT 2343 (3089)
T ss_dssp ECS-STT-----------SCSSCSSHHHHGGGHHHHHHHHHHCSTTTTTEEEEEEECCCEECS
T ss_pred CCc-ccc-----------cCCCchHHHHHHHHHHHHHHHHHhccccCCCeEEEEEeecccCCC
Confidence 221 111 1112347999999999999999988 3 3577888888877543
|
| >3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi} | Back alignment and structure |
|---|
Probab=99.29 E-value=1e-11 Score=93.63 Aligned_cols=97 Identities=22% Similarity=0.228 Sum_probs=75.6
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCC-CeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcC
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGG-FKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQ 80 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~ 80 (335)
.++|+|+|+|+ |++|+++++.|.+.| ++|++++|++..... +.. .++.++.+|+.+.+++.++++
T Consensus 3 ~~~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~----~~~-------~~~~~~~~d~~~~~~~~~~~~-- 68 (118)
T 3ic5_A 3 AMRWNICVVGA-GKIGQMIAALLKTSSNYSVTVADHDLAALAV----LNR-------MGVATKQVDAKDEAGLAKALG-- 68 (118)
T ss_dssp TTCEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESCHHHHHH----HHT-------TTCEEEECCTTCHHHHHHHTT--
T ss_pred CCcCeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCHHHHHH----HHh-------CCCcEEEecCCCHHHHHHHHc--
Confidence 35689999999 999999999999999 999999986433221 211 467789999999999999988
Q ss_pred CCCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEe
Q 019795 81 KFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFS 130 (335)
Q Consensus 81 ~~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~ 130 (335)
++|+|||+++... ...+++++.+.+++++...
T Consensus 69 ~~d~vi~~~~~~~------------------~~~~~~~~~~~g~~~~~~~ 100 (118)
T 3ic5_A 69 GFDAVISAAPFFL------------------TPIIAKAAKAAGAHYFDLT 100 (118)
T ss_dssp TCSEEEECSCGGG------------------HHHHHHHHHHTTCEEECCC
T ss_pred CCCEEEECCCchh------------------hHHHHHHHHHhCCCEEEec
Confidence 8999999986421 2468888888887555443
|
| >1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A | Back alignment and structure |
|---|
Probab=99.24 E-value=6.9e-12 Score=112.04 Aligned_cols=169 Identities=14% Similarity=0.098 Sum_probs=111.8
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhCCC-------eEEEEecC----CCCchhhHHhhhhhcCCccccceeEEEccCCCHHH
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQGGF-------KVVLIDNL----HNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDD 72 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~g~-------~V~~~~r~----~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~ 72 (335)
.++|+||||+||+|++++..|+..|. +|+++++. ..........+.+... .+ ..|+....+
T Consensus 5 ~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~~-----~~---~~~i~~~~~ 76 (329)
T 1b8p_A 5 PMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAF-----PL---LAGMTAHAD 76 (329)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTTC-----TT---EEEEEEESS
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhcc-----cc---cCcEEEecC
Confidence 46899999999999999999999885 79998875 2212222223332110 11 135554456
Q ss_pred HHHHHhcCCCCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcC-CC-EEEEecc-ccc--cCCCCCCCccCC
Q 019795 73 LDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYN-CK-KLVFSSS-ATI--YGQPEKIPCVED 147 (335)
Q Consensus 73 ~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~-~~v~~Ss-~~v--yg~~~~~~~~e~ 147 (335)
..++++ +.|+|||+|+.... .......++..|+.++.++++++.+.+ .+ ++|++|. +.+ |-. .+.
T Consensus 77 ~~~al~--~aD~Vi~~ag~~~~--~g~~r~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~SNPv~~~t~~~------~~~ 146 (329)
T 1b8p_A 77 PMTAFK--DADVALLVGARPRG--PGMERKDLLEANAQIFTVQGKAIDAVASRNIKVLVVGNPANTNAYIA------MKS 146 (329)
T ss_dssp HHHHTT--TCSEEEECCCCCCC--TTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHHHH------HHT
T ss_pred cHHHhC--CCCEEEEeCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccCchHHHHHHH------HHH
Confidence 677787 88999999997542 233455788999999999999999884 55 8888887 211 100 001
Q ss_pred C-CCCCCChhHHhHHHHHHHHHHHHhhCCCCeEEEEecccccCCC
Q 019795 148 F-PYGAMNPYGRTKQWCEEIAFDVQKADPEWRIILLRYFNPVGAH 191 (335)
Q Consensus 148 ~-~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~lR~~~v~G~~ 191 (335)
. ..++...++.+++...++...+++.. +.+...++...|+|.|
T Consensus 147 ~~~~p~~~v~g~t~Ld~~r~~~~la~~l-gv~~~~v~~~~v~G~H 190 (329)
T 1b8p_A 147 APSLPAKNFTAMLRLDHNRALSQIAAKT-GKPVSSIEKLFVWGNH 190 (329)
T ss_dssp CTTSCGGGEEECCHHHHHHHHHHHHHHH-TCCGGGEESCEEEBCS
T ss_pred cCCCCHHHEEEeecHHHHHHHHHHHHHh-CcCHHHceEEEEEecc
Confidence 1 12233357888777777777676665 6666666665678865
|
| >1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A | Back alignment and structure |
|---|
Probab=99.06 E-value=1.1e-09 Score=97.47 Aligned_cols=117 Identities=16% Similarity=0.161 Sum_probs=83.0
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCC--CeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcC
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGG--FKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQ 80 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~ 80 (335)
++++|+||||+|++|+.++..|+.+| .+|+++++.+. ......+.+... +..+ .+ +.+..++.++++
T Consensus 7 ~~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~--~~~~~dL~~~~~---~~~v---~~-~~~t~d~~~al~-- 75 (326)
T 1smk_A 7 PGFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNA--PGVTADISHMDT---GAVV---RG-FLGQQQLEAALT-- 75 (326)
T ss_dssp -CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSH--HHHHHHHHTSCS---SCEE---EE-EESHHHHHHHHT--
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCc--HhHHHHhhcccc---cceE---EE-EeCCCCHHHHcC--
Confidence 35689999999999999999999988 88999987644 222222332110 0112 22 234566778887
Q ss_pred CCCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEecc
Q 019795 81 KFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSS 132 (335)
Q Consensus 81 ~~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss 132 (335)
+.|+|||+|+.+... ......+...|+.++.++++++.+.+.+.+|+++|
T Consensus 76 gaDvVi~~ag~~~~~--g~~r~dl~~~N~~~~~~i~~~i~~~~p~~~viv~S 125 (326)
T 1smk_A 76 GMDLIIVPAGVPRKP--GMTRDDLFKINAGIVKTLCEGIAKCCPRAIVNLIS 125 (326)
T ss_dssp TCSEEEECCCCCCCS--SCCCSHHHHHHHHHHHHHHHHHHHHCTTSEEEECC
T ss_pred CCCEEEEcCCcCCCC--CCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEEC
Confidence 889999999975422 22234678899999999999999988777777766
|
| >1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* | Back alignment and structure |
|---|
Probab=98.99 E-value=6.8e-10 Score=97.29 Aligned_cols=82 Identities=22% Similarity=0.259 Sum_probs=66.1
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCC
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQK 81 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~ 81 (335)
+++|+++||||+|++|+++++.|++.|++|++++|+..+.....+.+... .++.++.+|+++++++.++++ .
T Consensus 117 l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~~~~~------~~~~~~~~D~~~~~~~~~~~~--~ 188 (287)
T 1lu9_A 117 VKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKR------FKVNVTAAETADDASRAEAVK--G 188 (287)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHH------HTCCCEEEECCSHHHHHHHTT--T
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHHHhc------CCcEEEEecCCCHHHHHHHHH--h
Confidence 46789999999999999999999999999999999754443333333221 245678899999999999998 6
Q ss_pred CCEEEEcccc
Q 019795 82 FEAVIHFGAL 91 (335)
Q Consensus 82 ~d~vi~~a~~ 91 (335)
+|+|||+|+.
T Consensus 189 ~DvlVn~ag~ 198 (287)
T 1lu9_A 189 AHFVFTAGAI 198 (287)
T ss_dssp CSEEEECCCT
T ss_pred CCEEEECCCc
Confidence 8999999975
|
| >1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A* | Back alignment and structure |
|---|
Probab=98.95 E-value=2.5e-09 Score=94.78 Aligned_cols=173 Identities=16% Similarity=0.146 Sum_probs=99.9
Q ss_pred CeEEEEcCCChhhHHHHHHHHhCCC--eEEEEec--CCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcC
Q 019795 5 KNILVTGGAGFIGTHCALQLLQGGF--KVVLIDN--LHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQ 80 (335)
Q Consensus 5 ~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r--~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~ 80 (335)
|+|+||||+||+|++++..|+.+|. +++++++ ...........+.+... .....+.+...| +++.++++
T Consensus 1 mKI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~-~~~~~~~i~~~~----d~l~~al~-- 73 (313)
T 1hye_A 1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALA-GTRSDANIYVES----DENLRIID-- 73 (313)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHT-TSCCCCEEEEEE----TTCGGGGT--
T ss_pred CEEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHHHhHH-hcCCCeEEEeCC----cchHHHhC--
Confidence 4899999999999999999998874 6777877 32212221222332211 111122322211 12445566
Q ss_pred CCCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccCCCCCCCccCCCCCCCCChhHH-h
Q 019795 81 KFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGR-T 159 (335)
Q Consensus 81 ~~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~Y~~-s 159 (335)
++|+|||+|+.+... ......++..|+.++.++++++++.+ +.+|+++|-=+.-.. . ........++...+|. +
T Consensus 74 gaD~Vi~~Ag~~~~~--g~~r~dl~~~N~~i~~~i~~~i~~~~-~~~vlv~SNPv~~~t-~-~~~k~~~~p~~rviG~gt 148 (313)
T 1hye_A 74 ESDVVIITSGVPRKE--GMSRMDLAKTNAKIVGKYAKKIAEIC-DTKIFVITNPVDVMT-Y-KALVDSKFERNQVFGLGT 148 (313)
T ss_dssp TCSEEEECCSCCCCT--TCCHHHHHHHHHHHHHHHHHHHHHHC-CCEEEECSSSHHHHH-H-HHHHHHCCCTTSEEECTT
T ss_pred CCCEEEECCCCCCCC--CCcHHHHHHHHHHHHHHHHHHHHHhC-CeEEEEecCcHHHHH-H-HHHHhhCcChhcEEEeCc
Confidence 899999999975322 23445789999999999999999988 877777763210000 0 0000112334445666 5
Q ss_pred HHHHHHHHHHHHhhCCCCeEEEEecccccCCC
Q 019795 160 KQWCEEIAFDVQKADPEWRIILLRYFNPVGAH 191 (335)
Q Consensus 160 K~~~E~~~~~~~~~~~~~~~~~lR~~~v~G~~ 191 (335)
.+...++....++.. +.+..-++. .++|.|
T Consensus 149 ~LD~~r~~~~la~~l-gv~~~~v~~-~v~G~H 178 (313)
T 1hye_A 149 HLDSLRFKVAIAKFF-GVHIDEVRT-RIIGEH 178 (313)
T ss_dssp HHHHHHHHHHHHHHH-TCCGGGEEC-CEEECS
T ss_pred cHHHHHHHHHHHHHh-CcCHHHeEE-EEeecc
Confidence 544555555455444 544333443 456654
|
| >4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A | Back alignment and structure |
|---|
Probab=98.94 E-value=1.6e-08 Score=90.37 Aligned_cols=86 Identities=17% Similarity=0.112 Sum_probs=66.3
Q ss_pred CCCeEEEEcCCChhhHHHHHHHH-hCCCeEEEEecCCCCchh-----------hHHhhhhhcCCccccceeEEEccCCCH
Q 019795 3 SEKNILVTGGAGFIGTHCALQLL-QGGFKVVLIDNLHNSVPE-----------AVDRVKDLAGPELAKKLEFHVGDLRNK 70 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~-~~g~~V~~~~r~~~~~~~-----------~~~~~~~~~~~~~~~~i~~~~~Dl~d~ 70 (335)
..|+||||||+.++|.+.+..|+ +.|..|+++.+....... ...+..+..+ .....+.+|+++.
T Consensus 49 ~pK~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G----~~a~~i~~Dv~d~ 124 (401)
T 4ggo_A 49 APKNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREG----LYSVTIDGDAFSD 124 (401)
T ss_dssp CCCEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHT----CCEEEEESCTTSH
T ss_pred CCCEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHcC----CCceeEeCCCCCH
Confidence 46999999999999999999998 679999999887654321 1112222222 5678899999999
Q ss_pred HHHHHHHhc-----CCCCEEEEccccc
Q 019795 71 DDLDKLFSS-----QKFEAVIHFGALK 92 (335)
Q Consensus 71 ~~~~~~~~~-----~~~d~vi~~a~~~ 92 (335)
+.++++++. +++|++||++|..
T Consensus 125 e~i~~vi~~i~~~~G~IDiLVhS~A~~ 151 (401)
T 4ggo_A 125 EIKAQVIEEAKKKGIKFDLIVYSLASP 151 (401)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEECCCCS
T ss_pred HHHHHHHHHHHHhcCCCCEEEEecccc
Confidence 988888775 5899999999864
|
| >1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A | Back alignment and structure |
|---|
Probab=98.86 E-value=1.1e-08 Score=90.08 Aligned_cols=115 Identities=11% Similarity=0.118 Sum_probs=77.9
Q ss_pred CeEEEEcCCChhhHHHHHHHHhCCC--eEEEEec--CCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcC
Q 019795 5 KNILVTGGAGFIGTHCALQLLQGGF--KVVLIDN--LHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQ 80 (335)
Q Consensus 5 ~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r--~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~ 80 (335)
|+|+||||+|++|++++..|+..|. +++++++ .+.........+.+... ....+.+.. + + .+.++
T Consensus 1 mKI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~--~~~~~~v~~-~--~----~~a~~-- 69 (303)
T 1o6z_A 1 TKVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIA--YDSNTRVRQ-G--G----YEDTA-- 69 (303)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHT--TTCCCEEEE-C--C----GGGGT--
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHHHh--hCCCcEEEe-C--C----HHHhC--
Confidence 4899999999999999999998875 6777877 33222222223333211 112333333 2 2 23455
Q ss_pred CCCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEecc
Q 019795 81 KFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSS 132 (335)
Q Consensus 81 ~~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss 132 (335)
+.|+|||+|+..... ......++..|+.++.++++++++.+.+.+|+++|
T Consensus 70 ~aDvVi~~ag~~~~~--g~~r~dl~~~N~~i~~~i~~~i~~~~p~~~viv~S 119 (303)
T 1o6z_A 70 GSDVVVITAGIPRQP--GQTRIDLAGDNAPIMEDIQSSLDEHNDDYISLTTS 119 (303)
T ss_dssp TCSEEEECCCCCCCT--TCCHHHHHHHHHHHHHHHHHHHHTTCSCCEEEECC
T ss_pred CCCEEEEcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEeC
Confidence 789999999975322 22344678999999999999999998777777766
|
| >2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A* | Back alignment and structure |
|---|
Probab=98.86 E-value=9.8e-09 Score=79.84 Aligned_cols=102 Identities=16% Similarity=0.161 Sum_probs=71.7
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHH-HhcCC
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKL-FSSQK 81 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~-~~~~~ 81 (335)
+|++|+|+|+ |.+|+.+++.|.+.|++|+++++++.. .+.+.+ .....+.+|.++.+.+.++ +. +
T Consensus 5 ~~~~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d~~~~~----~~~~~~-------~~~~~~~~d~~~~~~l~~~~~~--~ 70 (144)
T 2hmt_A 5 KNKQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEK----VNAYAS-------YATHAVIANATEENELLSLGIR--N 70 (144)
T ss_dssp -CCSEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHH----HHTTTT-------TCSEEEECCTTCHHHHHTTTGG--G
T ss_pred cCCcEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHH----HHHHHH-------hCCEEEEeCCCCHHHHHhcCCC--C
Confidence 5678999998 999999999999999999999885322 122211 2345678999998777765 44 7
Q ss_pred CCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEecccc
Q 019795 82 FEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSAT 134 (335)
Q Consensus 82 ~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~ 134 (335)
+|+||++++... +.|. .+++.+++.+.+++|..++..
T Consensus 71 ~d~vi~~~~~~~------------~~~~----~~~~~~~~~~~~~ii~~~~~~ 107 (144)
T 2hmt_A 71 FEYVIVAIGANI------------QAST----LTTLLLKELDIPNIWVKAQNY 107 (144)
T ss_dssp CSEEEECCCSCH------------HHHH----HHHHHHHHTTCSEEEEECCSH
T ss_pred CCEEEECCCCch------------HHHH----HHHHHHHHcCCCeEEEEeCCH
Confidence 899999877520 1122 355667777777777666544
|
| >1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A | Back alignment and structure |
|---|
Probab=98.85 E-value=4.9e-09 Score=97.39 Aligned_cols=109 Identities=18% Similarity=0.152 Sum_probs=75.8
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCC
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQK 81 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~ 81 (335)
|++|+|+|+| +|++|+++++.|++.|++|++.+|+..+. +.+.+.. ..+..+.+|++|.+++.++++ +
T Consensus 1 M~~k~VlViG-aG~iG~~ia~~L~~~G~~V~v~~R~~~~a----~~la~~~-----~~~~~~~~Dv~d~~~l~~~l~--~ 68 (450)
T 1ff9_A 1 MATKSVLMLG-SGFVTRPTLDVLTDSGIKVTVACRTLESA----KKLSAGV-----QHSTPISLDVNDDAALDAEVA--K 68 (450)
T ss_dssp -CCCEEEEEC-CSTTHHHHHHHHHTTTCEEEEEESSHHHH----HHTTTTC-----TTEEEEECCTTCHHHHHHHHT--T
T ss_pred CCCCEEEEEC-CCHHHHHHHHHHHhCcCEEEEEECCHHHH----HHHHHhc-----CCceEEEeecCCHHHHHHHHc--C
Confidence 4578999998 79999999999999999999999864322 2222111 246788899999999999997 8
Q ss_pred CCEEEEcccccchhhhhcChHHHHH--Hh-------HHHHHHHHHHHHHcCCC
Q 019795 82 FEAVIHFGALKAVAESVQHPFRYFD--NN-------LIGTINLYQAMAKYNCK 125 (335)
Q Consensus 82 ~d~vi~~a~~~~~~~~~~~~~~~~~--~n-------v~~~~~l~~~~~~~~~~ 125 (335)
+|+|||+++...... .....++ .| ...+..++++|++.|+.
T Consensus 69 ~DvVIn~a~~~~~~~---i~~a~l~~g~~vvd~~~~~~~~~~l~~aA~~aGv~ 118 (450)
T 1ff9_A 69 HDLVISLIPYTFHAT---VIKSAIRQKKHVVTTSYVSPAMMELDQAAKDAGIT 118 (450)
T ss_dssp SSEEEECCC--CHHH---HHHHHHHHTCEEEESSCCCHHHHHTHHHHHHTTCE
T ss_pred CcEEEECCccccchH---HHHHHHhCCCeEEEeecccHHHHHHHHHHHHCCCe
Confidence 999999998642211 0111111 12 23567888999998863
|
| >4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes} | Back alignment and structure |
|---|
Probab=98.84 E-value=1.2e-08 Score=93.62 Aligned_cols=99 Identities=14% Similarity=0.186 Sum_probs=74.9
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhCC---CeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcC
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQGG---FKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQ 80 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~ 80 (335)
|++|+|+|| |++|+.+++.|++.| .+|++.+|+..+.....+.+....+ .++..+.+|++|.+++.++++..
T Consensus 1 M~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~----~~~~~~~~D~~d~~~l~~~l~~~ 75 (405)
T 4ina_A 1 MAKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGY----GEIDITTVDADSIEELVALINEV 75 (405)
T ss_dssp -CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTC----CCCEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcC----CceEEEEecCCCHHHHHHHHHhh
Confidence 469999999 999999999999998 3899999976655444444432111 35888999999999999999854
Q ss_pred CCCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCC
Q 019795 81 KFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCK 125 (335)
Q Consensus 81 ~~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~ 125 (335)
++|+|||+++... ...++++|.+.++.
T Consensus 76 ~~DvVin~ag~~~------------------~~~v~~a~l~~g~~ 102 (405)
T 4ina_A 76 KPQIVLNIALPYQ------------------DLTIMEACLRTGVP 102 (405)
T ss_dssp CCSEEEECSCGGG------------------HHHHHHHHHHHTCC
T ss_pred CCCEEEECCCccc------------------ChHHHHHHHHhCCC
Confidence 5899999987521 02467788888753
|
| >3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=98.78 E-value=5e-08 Score=75.78 Aligned_cols=76 Identities=18% Similarity=0.283 Sum_probs=58.2
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCC
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQK 81 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~ 81 (335)
++|++++|+|+ |.+|+++++.|.+.|++|+++++++.. .+.+.+ ..+.++.+|.++++.+.++ ...+
T Consensus 4 ~~~~~v~I~G~-G~iG~~la~~L~~~g~~V~~id~~~~~----~~~~~~-------~~~~~~~gd~~~~~~l~~~-~~~~ 70 (141)
T 3llv_A 4 NGRYEYIVIGS-EAAGVGLVRELTAAGKKVLAVDKSKEK----IELLED-------EGFDAVIADPTDESFYRSL-DLEG 70 (141)
T ss_dssp --CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHH----HHHHHH-------TTCEEEECCTTCHHHHHHS-CCTT
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHHH----HHHHHH-------CCCcEEECCCCCHHHHHhC-Cccc
Confidence 35679999998 999999999999999999999986432 222222 3567899999999888876 2237
Q ss_pred CCEEEEccc
Q 019795 82 FEAVIHFGA 90 (335)
Q Consensus 82 ~d~vi~~a~ 90 (335)
+|+||.+.+
T Consensus 71 ~d~vi~~~~ 79 (141)
T 3llv_A 71 VSAVLITGS 79 (141)
T ss_dssp CSEEEECCS
T ss_pred CCEEEEecC
Confidence 899998655
|
| >3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=98.60 E-value=1.6e-07 Score=85.05 Aligned_cols=93 Identities=26% Similarity=0.233 Sum_probs=71.2
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCCC
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKFE 83 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~d 83 (335)
.|+|+|.|| |++|+.+++.|.+ .++|++.+++.... +++. +.+..+.+|+.|.+++.++++ +.|
T Consensus 16 ~mkilvlGa-G~vG~~~~~~L~~-~~~v~~~~~~~~~~----~~~~--------~~~~~~~~d~~d~~~l~~~~~--~~D 79 (365)
T 3abi_A 16 HMKVLILGA-GNIGRAIAWDLKD-EFDVYIGDVNNENL----EKVK--------EFATPLKVDASNFDKLVEVMK--EFE 79 (365)
T ss_dssp CCEEEEECC-SHHHHHHHHHHTT-TSEEEEEESCHHHH----HHHT--------TTSEEEECCTTCHHHHHHHHT--TCS
T ss_pred ccEEEEECC-CHHHHHHHHHHhc-CCCeEEEEcCHHHH----HHHh--------ccCCcEEEecCCHHHHHHHHh--CCC
Confidence 468999998 9999999999865 58999998864332 2221 456678899999999999998 789
Q ss_pred EEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEec
Q 019795 84 AVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSS 131 (335)
Q Consensus 84 ~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~S 131 (335)
+||++++... ...++++|.+.|+ ++|-+|
T Consensus 80 vVi~~~p~~~------------------~~~v~~~~~~~g~-~yvD~s 108 (365)
T 3abi_A 80 LVIGALPGFL------------------GFKSIKAAIKSKV-DMVDVS 108 (365)
T ss_dssp EEEECCCGGG------------------HHHHHHHHHHHTC-EEEECC
T ss_pred EEEEecCCcc------------------cchHHHHHHhcCc-ceEeee
Confidence 9999876521 1248888998885 676655
|
| >1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9 | Back alignment and structure |
|---|
Probab=98.59 E-value=3.9e-07 Score=70.28 Aligned_cols=98 Identities=19% Similarity=0.192 Sum_probs=67.2
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHH-HhcCCC
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKL-FSSQKF 82 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~-~~~~~~ 82 (335)
+|+|+|+|+ |++|+.+++.|.+.|++|+++++++.. .+.+.+. .++.++.+|..+.+.+.+. +. ++
T Consensus 4 ~m~i~IiG~-G~iG~~~a~~L~~~g~~v~~~d~~~~~----~~~~~~~------~~~~~~~~d~~~~~~l~~~~~~--~~ 70 (140)
T 1lss_A 4 GMYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDI----CKKASAE------IDALVINGDCTKIKTLEDAGIE--DA 70 (140)
T ss_dssp -CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHH----HHHHHHH------CSSEEEESCTTSHHHHHHTTTT--TC
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHH----HHHHHHh------cCcEEEEcCCCCHHHHHHcCcc--cC
Confidence 578999997 999999999999999999999985432 2222211 1456788999888777654 44 78
Q ss_pred CEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEec
Q 019795 83 EAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSS 131 (335)
Q Consensus 83 d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~S 131 (335)
|+||++.... ..|. .+++.++..+.+++|..+
T Consensus 71 d~vi~~~~~~-------------~~~~----~~~~~~~~~~~~~ii~~~ 102 (140)
T 1lss_A 71 DMYIAVTGKE-------------EVNL----MSSLLAKSYGINKTIARI 102 (140)
T ss_dssp SEEEECCSCH-------------HHHH----HHHHHHHHTTCCCEEEEC
T ss_pred CEEEEeeCCc-------------hHHH----HHHHHHHHcCCCEEEEEe
Confidence 9999986431 1122 355566666766776543
|
| >1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A* | Back alignment and structure |
|---|
Probab=98.57 E-value=2.3e-07 Score=77.37 Aligned_cols=75 Identities=20% Similarity=0.279 Sum_probs=55.9
Q ss_pred CCCCeEEEEcC----------------CChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEc
Q 019795 2 ASEKNILVTGG----------------AGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVG 65 (335)
Q Consensus 2 ~~~~~vlItGa----------------tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 65 (335)
+++|+|||||| ||.+|.++++.|+++|++|+++++... ... +.++ -..
T Consensus 6 l~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~~-l~~-------------~~g~--~~~ 69 (226)
T 1u7z_A 6 LKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVS-LPT-------------PPFV--KRV 69 (226)
T ss_dssp TTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCC-CCC-------------CTTE--EEE
T ss_pred CCCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCcc-ccc-------------CCCC--eEE
Confidence 56899999999 699999999999999999999887542 110 0223 346
Q ss_pred cCCCHHHHHHHHhc--CCCCEEEEccccc
Q 019795 66 DLRNKDDLDKLFSS--QKFEAVIHFGALK 92 (335)
Q Consensus 66 Dl~d~~~~~~~~~~--~~~d~vi~~a~~~ 92 (335)
|+.+.+++.+.+.. .++|++||+||+.
T Consensus 70 dv~~~~~~~~~v~~~~~~~Dili~~Aav~ 98 (226)
T 1u7z_A 70 DVMTALEMEAAVNASVQQQNIFIGCAAVA 98 (226)
T ss_dssp ECCSHHHHHHHHHHHGGGCSEEEECCBCC
T ss_pred ccCcHHHHHHHHHHhcCCCCEEEECCccc
Confidence 88887665544322 3799999999974
|
| >1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9 | Back alignment and structure |
|---|
Probab=98.49 E-value=1.1e-06 Score=69.20 Aligned_cols=80 Identities=20% Similarity=0.338 Sum_probs=59.7
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHH-HhcC
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKL-FSSQ 80 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~-~~~~ 80 (335)
|..++++|+|+ |.+|+.+++.|.+.|++|+++++++.. ..+.+.... +.++.++.+|.++++.+.++ ++
T Consensus 1 ~~~~~vlI~G~-G~vG~~la~~L~~~g~~V~vid~~~~~---~~~~~~~~~----~~~~~~i~gd~~~~~~l~~a~i~-- 70 (153)
T 1id1_A 1 HRKDHFIVCGH-SILAINTILQLNQRGQNVTVISNLPED---DIKQLEQRL----GDNADVIPGDSNDSSVLKKAGID-- 70 (153)
T ss_dssp CCCSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHH---HHHHHHHHH----CTTCEEEESCTTSHHHHHHHTTT--
T ss_pred CCCCcEEEECC-CHHHHHHHHHHHHCCCCEEEEECCChH---HHHHHHHhh----cCCCeEEEcCCCCHHHHHHcChh--
Confidence 34678999996 999999999999999999999985321 111222111 14688999999999988876 66
Q ss_pred CCCEEEEcccc
Q 019795 81 KFEAVIHFGAL 91 (335)
Q Consensus 81 ~~d~vi~~a~~ 91 (335)
+.|.||-+.+.
T Consensus 71 ~ad~vi~~~~~ 81 (153)
T 1id1_A 71 RCRAILALSDN 81 (153)
T ss_dssp TCSEEEECSSC
T ss_pred hCCEEEEecCC
Confidence 78999976543
|
| >2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae} | Back alignment and structure |
|---|
Probab=98.48 E-value=5.4e-07 Score=75.27 Aligned_cols=77 Identities=30% Similarity=0.457 Sum_probs=53.7
Q ss_pred CCCeEEEEcC----------------CChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEcc
Q 019795 3 SEKNILVTGG----------------AGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGD 66 (335)
Q Consensus 3 ~~~~vlItGa----------------tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D 66 (335)
++|+|||||| ||.+|.+++++|+++|++|++++|...... ..+.++..+ |
T Consensus 2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~~~------------~~~~~~~~~--~ 67 (232)
T 2gk4_A 2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRALKP------------EPHPNLSIR--E 67 (232)
T ss_dssp -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSCCC------------CCCTTEEEE--E
T ss_pred CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCccccc------------cCCCCeEEE--E
Confidence 5799999999 999999999999999999999998543211 001344444 5
Q ss_pred CCCHHHHHHHHhc--CCCCEEEEcccccc
Q 019795 67 LRNKDDLDKLFSS--QKFEAVIHFGALKA 93 (335)
Q Consensus 67 l~d~~~~~~~~~~--~~~d~vi~~a~~~~ 93 (335)
+....++.+.+.. .++|++||+||+..
T Consensus 68 v~s~~em~~~v~~~~~~~Dili~aAAvsD 96 (232)
T 2gk4_A 68 ITNTKDLLIEMQERVQDYQVLIHSMAVSD 96 (232)
T ss_dssp CCSHHHHHHHHHHHGGGCSEEEECSBCCS
T ss_pred HhHHHHHHHHHHHhcCCCCEEEEcCcccc
Confidence 5555444333321 27899999999743
|
| >1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A* | Back alignment and structure |
|---|
Probab=98.43 E-value=1.9e-06 Score=76.12 Aligned_cols=115 Identities=17% Similarity=0.161 Sum_probs=79.0
Q ss_pred CeEEEEcCCChhhHHHHHHHHhCC--CeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCC
Q 019795 5 KNILVTGGAGFIGTHCALQLLQGG--FKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKF 82 (335)
Q Consensus 5 ~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~ 82 (335)
|+|.|+||+|++|+.++..|+..| .+|+++++.+ .......+.+... +..+.... ...++.++++ +.
T Consensus 1 mKI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~--~~~~a~dL~~~~~---~~~l~~~~----~t~d~~~a~~--~a 69 (314)
T 1mld_A 1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH--TPGVAADLSHIET---RATVKGYL----GPEQLPDCLK--GC 69 (314)
T ss_dssp CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS--HHHHHHHHTTSSS---SCEEEEEE----SGGGHHHHHT--TC
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCc--cHHHHHHHhccCc---CceEEEec----CCCCHHHHhC--CC
Confidence 489999999999999999999888 7899999875 2233333333211 11122211 1235666777 88
Q ss_pred CEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCC-CEEEEecc
Q 019795 83 EAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNC-KKLVFSSS 132 (335)
Q Consensus 83 d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~-~~~v~~Ss 132 (335)
|+||++|+.+... .+.-..+...|+..+..+++.+.+... .++|++|.
T Consensus 70 DvVvi~ag~~~~~--g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~sN 118 (314)
T 1mld_A 70 DVVVIPAGVPRKP--GMTRDDLFNTNATIVATLTAACAQHCPDAMICIISN 118 (314)
T ss_dssp SEEEECCSCCCCT--TCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECSS
T ss_pred CEEEECCCcCCCC--CCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECC
Confidence 9999999985422 223346788999999999999988764 36777654
|
| >2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A* | Back alignment and structure |
|---|
Probab=98.41 E-value=3.3e-06 Score=66.55 Aligned_cols=76 Identities=22% Similarity=0.242 Sum_probs=56.6
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHH-HhcCC
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKL-FSSQK 81 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~-~~~~~ 81 (335)
.+++|+|+|+ |.+|+.+++.|.+.|++|+++++++..... +.. ..+...+.+|..+.+.+.++ +. +
T Consensus 18 ~~~~v~IiG~-G~iG~~la~~L~~~g~~V~vid~~~~~~~~----~~~------~~g~~~~~~d~~~~~~l~~~~~~--~ 84 (155)
T 2g1u_A 18 KSKYIVIFGC-GRLGSLIANLASSSGHSVVVVDKNEYAFHR----LNS------EFSGFTVVGDAAEFETLKECGME--K 84 (155)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGGGG----SCT------TCCSEEEESCTTSHHHHHTTTGG--G
T ss_pred CCCcEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHH----HHh------cCCCcEEEecCCCHHHHHHcCcc--c
Confidence 4578999996 999999999999999999999986543321 110 03456778898887766654 44 6
Q ss_pred CCEEEEcccc
Q 019795 82 FEAVIHFGAL 91 (335)
Q Consensus 82 ~d~vi~~a~~ 91 (335)
+|+||.+.+.
T Consensus 85 ad~Vi~~~~~ 94 (155)
T 2g1u_A 85 ADMVFAFTND 94 (155)
T ss_dssp CSEEEECSSC
T ss_pred CCEEEEEeCC
Confidence 8999987654
|
| >5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A* | Back alignment and structure |
|---|
Probab=98.41 E-value=2.5e-07 Score=82.21 Aligned_cols=117 Identities=22% Similarity=0.235 Sum_probs=78.4
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhCCC--e-----EEEEecCCC--CchhhHHhhhhhcCCccccceeEEEccCCCHHHHH
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQGGF--K-----VVLIDNLHN--SVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLD 74 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~g~--~-----V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~ 74 (335)
.++|+||||+|+||++++..|+..|. + ++++++.+. ......-.+.+... +-.. ++.......
T Consensus 3 ~~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~~~~----~~~~----~~~~~~~~~ 74 (333)
T 5mdh_A 3 PIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCAL----PLLK----DVIATDKEE 74 (333)
T ss_dssp CEEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCC----TTEE----EEEEESCHH
T ss_pred CeEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhHhhhHhhhh----cccC----CEEEcCCcH
Confidence 46899999999999999999998764 4 888887432 22223333443211 1111 121122234
Q ss_pred HHHhcCCCCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCC--EEEEecc
Q 019795 75 KLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCK--KLVFSSS 132 (335)
Q Consensus 75 ~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~--~~v~~Ss 132 (335)
+.++ +.|+||++||.+.. ..++-...++.|+..+..+++++++.+.+ +++.+|.
T Consensus 75 ~~~~--daDvVvitAg~prk--pG~tR~dll~~N~~i~~~i~~~i~~~~~~~~~vivvsN 130 (333)
T 5mdh_A 75 IAFK--DLDVAILVGSMPRR--DGMERKDLLKANVKIFKCQGAALDKYAKKSVKVIVVGN 130 (333)
T ss_dssp HHTT--TCSEEEECCSCCCC--TTCCTTTTHHHHHHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred HHhC--CCCEEEEeCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCC
Confidence 4565 78999999997532 22344578899999999999999998764 5777765
|
| >2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.40 E-value=4.1e-07 Score=84.66 Aligned_cols=78 Identities=18% Similarity=0.224 Sum_probs=60.8
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhC-CCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcC
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQG-GFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQ 80 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~ 80 (335)
+++++|+|+|+ |++|+.+++.|++. |++|++++|+..+.. .+.+. .++..+.+|+.|.+++.++++
T Consensus 21 l~~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R~~~ka~----~la~~------~~~~~~~~D~~d~~~l~~~l~-- 87 (467)
T 2axq_A 21 HMGKNVLLLGS-GFVAQPVIDTLAANDDINVTVACRTLANAQ----ALAKP------SGSKAISLDVTDDSALDKVLA-- 87 (467)
T ss_dssp --CEEEEEECC-STTHHHHHHHHHTSTTEEEEEEESSHHHHH----HHHGG------GTCEEEECCTTCHHHHHHHHH--
T ss_pred CCCCEEEEECC-hHHHHHHHHHHHhCCCCeEEEEECCHHHHH----HHHHh------cCCcEEEEecCCHHHHHHHHc--
Confidence 35789999998 99999999999998 789999998643322 22211 235677899999999999998
Q ss_pred CCCEEEEccccc
Q 019795 81 KFEAVIHFGALK 92 (335)
Q Consensus 81 ~~d~vi~~a~~~ 92 (335)
++|+|||+++..
T Consensus 88 ~~DvVIn~tp~~ 99 (467)
T 2axq_A 88 DNDVVISLIPYT 99 (467)
T ss_dssp TSSEEEECSCGG
T ss_pred CCCEEEECCchh
Confidence 799999998864
|
| >3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=98.24 E-value=1.3e-06 Score=77.76 Aligned_cols=118 Identities=14% Similarity=0.180 Sum_probs=78.4
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCC--CeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGG--FKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~ 79 (335)
|.+++|.|+|++|++|+.++..|+..| .+|+++++...+.......+.+...+ ...+.+ ..+..+.++
T Consensus 6 ~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~~~~--~~~i~~-------t~d~~~al~- 75 (343)
T 3fi9_A 6 LTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCGFE--GLNLTF-------TSDIKEALT- 75 (343)
T ss_dssp SCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHHCCT--TCCCEE-------ESCHHHHHT-
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhCcCC--CCceEE-------cCCHHHHhC-
Confidence 667899999999999999999999988 58999998654444333344443210 012221 123455566
Q ss_pred CCCCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCE--EEEecc
Q 019795 80 QKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKK--LVFSSS 132 (335)
Q Consensus 80 ~~~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~--~v~~Ss 132 (335)
+.|+||.+||.+.. ..+.-..++..|+.....+.+.+.+.+.+. ++.+|.
T Consensus 76 -dADvVvitaG~p~k--pG~~R~dLl~~N~~I~~~i~~~i~~~~p~a~~vlvvsN 127 (343)
T 3fi9_A 76 -DAKYIVSSGGAPRK--EGMTREDLLKGNAEIAAQLGKDIKSYCPDCKHVIIIFN 127 (343)
T ss_dssp -TEEEEEECCC---------CHHHHHHHHHHHHHHHHHHHHHHCTTCCEEEECSS
T ss_pred -CCCEEEEccCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHhccCcEEEEEecC
Confidence 78999999997532 223445778899999999999998876443 456554
|
| >3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=98.14 E-value=1.1e-05 Score=65.25 Aligned_cols=73 Identities=18% Similarity=0.195 Sum_probs=56.5
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhC-CCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHH--HhcC
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQG-GFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKL--FSSQ 80 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~--~~~~ 80 (335)
+++|+|+|+ |.+|+.+++.|.+. |++|+++++++... +.+.. .++..+.+|.++++.+.++ ++
T Consensus 39 ~~~v~IiG~-G~~G~~~a~~L~~~~g~~V~vid~~~~~~----~~~~~-------~g~~~~~gd~~~~~~l~~~~~~~-- 104 (183)
T 3c85_A 39 HAQVLILGM-GRIGTGAYDELRARYGKISLGIEIREEAA----QQHRS-------EGRNVISGDATDPDFWERILDTG-- 104 (183)
T ss_dssp TCSEEEECC-SHHHHHHHHHHHHHHCSCEEEEESCHHHH----HHHHH-------TTCCEEECCTTCHHHHHTBCSCC--
T ss_pred CCcEEEECC-CHHHHHHHHHHHhccCCeEEEEECCHHHH----HHHHH-------CCCCEEEcCCCCHHHHHhccCCC--
Confidence 568999995 99999999999999 99999999864332 22222 3567788999998877766 54
Q ss_pred CCCEEEEccc
Q 019795 81 KFEAVIHFGA 90 (335)
Q Consensus 81 ~~d~vi~~a~ 90 (335)
++|+||.+.+
T Consensus 105 ~ad~vi~~~~ 114 (183)
T 3c85_A 105 HVKLVLLAMP 114 (183)
T ss_dssp CCCEEEECCS
T ss_pred CCCEEEEeCC
Confidence 7899998654
|
| >3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=98.12 E-value=1.1e-05 Score=67.23 Aligned_cols=73 Identities=21% Similarity=0.253 Sum_probs=56.6
Q ss_pred CeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHH-HhcCCCC
Q 019795 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKL-FSSQKFE 83 (335)
Q Consensus 5 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~-~~~~~~d 83 (335)
|+|+|+|+ |.+|+++++.|.+.|++|+++++++... +.+.+. .++.++.+|.++++.+.++ ++ ++|
T Consensus 1 M~iiIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~----~~l~~~------~~~~~i~gd~~~~~~l~~a~i~--~ad 67 (218)
T 3l4b_C 1 MKVIIIGG-ETTAYYLARSMLSRKYGVVIINKDRELC----EEFAKK------LKATIIHGDGSHKEILRDAEVS--KND 67 (218)
T ss_dssp CCEEEECC-HHHHHHHHHHHHHTTCCEEEEESCHHHH----HHHHHH------SSSEEEESCTTSHHHHHHHTCC--TTC
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHH----HHHHHH------cCCeEEEcCCCCHHHHHhcCcc--cCC
Confidence 47999997 9999999999999999999999864332 222211 3567899999999888876 44 789
Q ss_pred EEEEccc
Q 019795 84 AVIHFGA 90 (335)
Q Consensus 84 ~vi~~a~ 90 (335)
+||-+.+
T Consensus 68 ~vi~~~~ 74 (218)
T 3l4b_C 68 VVVILTP 74 (218)
T ss_dssp EEEECCS
T ss_pred EEEEecC
Confidence 9996544
|
| >3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12} | Back alignment and structure |
|---|
Probab=98.04 E-value=1.3e-05 Score=61.93 Aligned_cols=74 Identities=18% Similarity=0.255 Sum_probs=57.4
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHH-HhcCCC
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKL-FSSQKF 82 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~-~~~~~~ 82 (335)
.++|+|.|. |.+|+.+++.|.+.|++|+++++++.. .+.+.+ .++..+.+|.++++.+.++ ++ +.
T Consensus 7 ~~~viIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~----~~~~~~-------~g~~~i~gd~~~~~~l~~a~i~--~a 72 (140)
T 3fwz_A 7 CNHALLVGY-GRVGSLLGEKLLASDIPLVVIETSRTR----VDELRE-------RGVRAVLGNAANEEIMQLAHLE--CA 72 (140)
T ss_dssp CSCEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHH----HHHHHH-------TTCEEEESCTTSHHHHHHTTGG--GC
T ss_pred CCCEEEECc-CHHHHHHHHHHHHCCCCEEEEECCHHH----HHHHHH-------cCCCEEECCCCCHHHHHhcCcc--cC
Confidence 468999997 999999999999999999999986443 222322 4677899999999887765 33 68
Q ss_pred CEEEEcccc
Q 019795 83 EAVIHFGAL 91 (335)
Q Consensus 83 d~vi~~a~~ 91 (335)
|.||-+.+.
T Consensus 73 d~vi~~~~~ 81 (140)
T 3fwz_A 73 KWLILTIPN 81 (140)
T ss_dssp SEEEECCSC
T ss_pred CEEEEECCC
Confidence 999876443
|
| >1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1 | Back alignment and structure |
|---|
Probab=98.03 E-value=5.1e-06 Score=68.15 Aligned_cols=77 Identities=18% Similarity=0.157 Sum_probs=52.2
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHH---HHHHhc
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDL---DKLFSS 79 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~---~~~~~~ 79 (335)
.+++|+|+||+|.||..+++.+...|++|+++++++... +.+.+. +.. ...|..+.+.. .+....
T Consensus 38 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~----~~~~~~-------g~~-~~~d~~~~~~~~~~~~~~~~ 105 (198)
T 1pqw_A 38 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKR----EMLSRL-------GVE-YVGDSRSVDFADEILELTDG 105 (198)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHH----HHHHTT-------CCS-EEEETTCSTHHHHHHHHTTT
T ss_pred CCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHH----HHHHHc-------CCC-EEeeCCcHHHHHHHHHHhCC
Confidence 468999999999999999999999999999998853322 222221 111 22466654433 333333
Q ss_pred CCCCEEEEcccc
Q 019795 80 QKFEAVIHFGAL 91 (335)
Q Consensus 80 ~~~d~vi~~a~~ 91 (335)
.++|+||++++.
T Consensus 106 ~~~D~vi~~~g~ 117 (198)
T 1pqw_A 106 YGVDVVLNSLAG 117 (198)
T ss_dssp CCEEEEEECCCT
T ss_pred CCCeEEEECCch
Confidence 469999999873
|
| >3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A* | Back alignment and structure |
|---|
Probab=98.00 E-value=3.8e-05 Score=67.88 Aligned_cols=116 Identities=13% Similarity=0.181 Sum_probs=78.2
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhCCC--eEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCC
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQGGF--KVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQK 81 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~ 81 (335)
+++|.|+|+ |.+|+.++..|+..|. +|+++++++.+.......+.+..+ ..+..+.....| . +.++ +
T Consensus 5 ~~kI~ViGa-G~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~-~~~~~v~i~~~~---~----~a~~--~ 73 (326)
T 3pqe_A 5 VNKVALIGA-GFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKA-FAPQPVKTSYGT---Y----EDCK--D 73 (326)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGG-GSSSCCEEEEEC---G----GGGT--T
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccc-cccCCeEEEeCc---H----HHhC--C
Confidence 579999996 9999999999999886 899999865444443334444311 111234443322 1 2455 7
Q ss_pred CCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCC-EEEEecc
Q 019795 82 FEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCK-KLVFSSS 132 (335)
Q Consensus 82 ~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~-~~v~~Ss 132 (335)
.|+||.+||.+.. ....-..++..|+.....+.+.+.+...+ .++.+|.
T Consensus 74 aDvVvi~ag~p~k--pG~~R~dL~~~N~~Iv~~i~~~I~~~~p~a~vlvvtN 123 (326)
T 3pqe_A 74 ADIVCICAGANQK--PGETRLELVEKNLKIFKGIVSEVMASGFDGIFLVATN 123 (326)
T ss_dssp CSEEEECCSCCCC--TTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECSS
T ss_pred CCEEEEecccCCC--CCccHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcCC
Confidence 8999999987532 22334467889999999999999887643 4555554
|
| >3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A* | Back alignment and structure |
|---|
Probab=97.99 E-value=2.4e-05 Score=68.80 Aligned_cols=81 Identities=12% Similarity=0.239 Sum_probs=58.2
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCC---CchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHH
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGF-KVVLIDNLHN---SVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLF 77 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~---~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~ 77 (335)
+++|+++|+|+ |.+|+.++..|.+.|. +|++++|+.. +..+..+++.... .+.....++.+.+++.+.+
T Consensus 152 l~gk~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~------~~~~~~~~~~~~~~l~~~l 224 (315)
T 3tnl_A 152 IIGKKMTICGA-GGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKT------DCKAQLFDIEDHEQLRKEI 224 (315)
T ss_dssp CTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHS------SCEEEEEETTCHHHHHHHH
T ss_pred ccCCEEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhc------CCceEEeccchHHHHHhhh
Confidence 36789999998 8999999999999998 8999999733 2233333332221 2333445677777788888
Q ss_pred hcCCCCEEEEcccc
Q 019795 78 SSQKFEAVIHFGAL 91 (335)
Q Consensus 78 ~~~~~d~vi~~a~~ 91 (335)
. .+|+||++...
T Consensus 225 ~--~aDiIINaTp~ 236 (315)
T 3tnl_A 225 A--ESVIFTNATGV 236 (315)
T ss_dssp H--TCSEEEECSST
T ss_pred c--CCCEEEECccC
Confidence 7 78999998664
|
| >1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B* | Back alignment and structure |
|---|
Probab=97.89 E-value=5.1e-05 Score=64.59 Aligned_cols=109 Identities=17% Similarity=0.163 Sum_probs=70.2
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCC-------------------CCchhhHHhhhhhcCCccccceeE
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGF-KVVLIDNLH-------------------NSVPEAVDRVKDLAGPELAKKLEF 62 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~-------------------~~~~~~~~~~~~~~~~~~~~~i~~ 62 (335)
++++|+|.|+ |.+|+++++.|+..|. ++++++++. ++.....+++.++-+ ...+..
T Consensus 30 ~~~~VlVvG~-Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np---~~~v~~ 105 (249)
T 1jw9_B 30 KDSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINP---HIAITP 105 (249)
T ss_dssp HHCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCT---TSEEEE
T ss_pred hCCeEEEEee-CHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCC---CcEEEE
Confidence 3578999997 8999999999999996 889998876 333333344433211 124555
Q ss_pred EEccCCCHHHHHHHHhcCCCCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEecccccc
Q 019795 63 HVGDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIY 136 (335)
Q Consensus 63 ~~~Dl~d~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vy 136 (335)
+..+++ .+.+.++++ ++|+||.+.... ..-..+.++|++.+. .+|+.+....+
T Consensus 106 ~~~~~~-~~~~~~~~~--~~DvVi~~~d~~-----------------~~~~~l~~~~~~~~~-p~i~~~~~g~~ 158 (249)
T 1jw9_B 106 VNALLD-DAELAALIA--EHDLVLDCTDNV-----------------AVRNQLNAGCFAAKV-PLVSGAAIRME 158 (249)
T ss_dssp ECSCCC-HHHHHHHHH--TSSEEEECCSSH-----------------HHHHHHHHHHHHHTC-CEEEEEEEBTE
T ss_pred EeccCC-HhHHHHHHh--CCCEEEEeCCCH-----------------HHHHHHHHHHHHcCC-CEEEeeeccce
Confidence 555665 356677787 789999875431 112245566777664 56666554433
|
| >1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A* | Back alignment and structure |
|---|
Probab=97.84 E-value=1.6e-05 Score=70.77 Aligned_cols=77 Identities=16% Similarity=0.241 Sum_probs=52.0
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHh---c
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFS---S 79 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~---~ 79 (335)
.+++|||+||+|.||..+++.+...|++|+++++++.... .+.+. + . . ...|..+.+++.+.+. .
T Consensus 145 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~----~~~~~-g----~--~-~~~d~~~~~~~~~~~~~~~~ 212 (333)
T 1v3u_A 145 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIA----YLKQI-G----F--D-AAFNYKTVNSLEEALKKASP 212 (333)
T ss_dssp SSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHH----HHHHT-T----C--S-EEEETTSCSCHHHHHHHHCT
T ss_pred CCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHH----HHHhc-C----C--c-EEEecCCHHHHHHHHHHHhC
Confidence 4689999999999999999999999999999988543322 22221 1 1 1 2346665222332222 1
Q ss_pred CCCCEEEEcccc
Q 019795 80 QKFEAVIHFGAL 91 (335)
Q Consensus 80 ~~~d~vi~~a~~ 91 (335)
.++|+||+++|.
T Consensus 213 ~~~d~vi~~~g~ 224 (333)
T 1v3u_A 213 DGYDCYFDNVGG 224 (333)
T ss_dssp TCEEEEEESSCH
T ss_pred CCCeEEEECCCh
Confidence 479999999884
|
| >2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=97.83 E-value=2.9e-05 Score=70.19 Aligned_cols=76 Identities=20% Similarity=0.315 Sum_probs=57.1
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCC
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKF 82 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~ 82 (335)
.+++|+|+|+ |.+|+.+++.|...|++|++++|++..... +.+..+ .. +.+|..+.+++.+++. ++
T Consensus 165 ~~~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~----~~~~~g----~~---~~~~~~~~~~l~~~~~--~~ 230 (369)
T 2eez_A 165 APASVVILGG-GTVGTNAAKIALGMGAQVTILDVNHKRLQY----LDDVFG----GR---VITLTATEANIKKSVQ--HA 230 (369)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHH----HHHHTT----TS---EEEEECCHHHHHHHHH--HC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHH----HHHhcC----ce---EEEecCCHHHHHHHHh--CC
Confidence 4689999999 999999999999999999999986543222 211111 11 4567778888988887 78
Q ss_pred CEEEEccccc
Q 019795 83 EAVIHFGALK 92 (335)
Q Consensus 83 d~vi~~a~~~ 92 (335)
|+||++++..
T Consensus 231 DvVi~~~g~~ 240 (369)
T 2eez_A 231 DLLIGAVLVP 240 (369)
T ss_dssp SEEEECCC--
T ss_pred CEEEECCCCC
Confidence 9999998864
|
| >1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A* | Back alignment and structure |
|---|
Probab=97.82 E-value=3e-05 Score=68.26 Aligned_cols=116 Identities=12% Similarity=0.079 Sum_probs=71.6
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCCchhhHHhhhhhcCCccccceeEEE-ccCCCHHHHHHHHhcCC
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQGGF-KVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHV-GDLRNKDDLDKLFSSQK 81 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~-~Dl~d~~~~~~~~~~~~ 81 (335)
+++|.|+|+ |.+|+.++..|+..|+ +|+++++++.........+.+.... ......+.. .| . +.++ +
T Consensus 2 ~~kI~VIGa-G~vG~~~a~~la~~g~~~v~L~Di~~~~~~g~~~dl~~~~~~-~~~~~~i~~t~d------~-~a~~--~ 70 (309)
T 1ur5_A 2 RKKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPI-EGFDVRVTGTNN------Y-ADTA--N 70 (309)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSSSHHHHHHHHHHTTHHH-HTCCCCEEEESC------G-GGGT--T
T ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCCccHHHHHHHhHHHhHhh-cCCCeEEEECCC------H-HHHC--C
Confidence 468999999 9999999999999996 8999998765444333333321100 001222222 22 2 2355 7
Q ss_pred CCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEecc
Q 019795 82 FEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSS 132 (335)
Q Consensus 82 ~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss 132 (335)
.|+||.+++.+.... ..-..+...|+.....+.+.+.+...+.+|.+.|
T Consensus 71 aD~Vi~a~g~p~~~g--~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~~t 119 (309)
T 1ur5_A 71 SDVIVVTSGAPRKPG--MSREDLIKVNADITRACISQAAPLSPNAVIIMVN 119 (309)
T ss_dssp CSEEEECCCC----------CHHHHHHHHHHHHHHHHHGGGCTTCEEEECC
T ss_pred CCEEEEcCCCCCCCC--CCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEcC
Confidence 899999998754222 1122456778888888999988876555554444
|
| >2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A | Back alignment and structure |
|---|
Probab=97.78 E-value=6.7e-05 Score=63.17 Aligned_cols=71 Identities=20% Similarity=0.213 Sum_probs=55.1
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHH-HhcCCC
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKL-FSSQKF 82 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~-~~~~~~ 82 (335)
.++++|.|+ |.+|+.+++.|.+.|+ |+++++++... +.+. .++.++.+|.++++.+.++ ++ ++
T Consensus 9 ~~~viI~G~-G~~G~~la~~L~~~g~-v~vid~~~~~~----~~~~--------~~~~~i~gd~~~~~~l~~a~i~--~a 72 (234)
T 2aef_A 9 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRK----KVLR--------SGANFVHGDPTRVSDLEKANVR--GA 72 (234)
T ss_dssp -CEEEEESC-CHHHHHHHHHSTTSEE-EEEESCGGGHH----HHHH--------TTCEEEESCTTCHHHHHHTTCT--TC
T ss_pred CCEEEEECC-ChHHHHHHHHHHhCCe-EEEEECCHHHH----HHHh--------cCCeEEEcCCCCHHHHHhcCcc--hh
Confidence 468999998 9999999999999999 99998754322 2221 2478899999999988876 55 78
Q ss_pred CEEEEccc
Q 019795 83 EAVIHFGA 90 (335)
Q Consensus 83 d~vi~~a~ 90 (335)
|.||.+.+
T Consensus 73 d~vi~~~~ 80 (234)
T 2aef_A 73 RAVIVDLE 80 (234)
T ss_dssp SEEEECCS
T ss_pred cEEEEcCC
Confidence 99997644
|
| >1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A* | Back alignment and structure |
|---|
Probab=97.77 E-value=1.5e-05 Score=68.78 Aligned_cols=35 Identities=14% Similarity=0.283 Sum_probs=28.3
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHh-CCCeEEEE-ecC
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQ-GGFKVVLI-DNL 37 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~-~g~~V~~~-~r~ 37 (335)
++++|.|+|++|.+|+.+++.+.+ .|++++++ ++.
T Consensus 4 ~~mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d~~ 40 (273)
T 1dih_A 4 ANIRVAIAGAGGRMGRQLIQAALALEGVQLGAALERE 40 (273)
T ss_dssp CBEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCT
T ss_pred CCcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecC
Confidence 347899999999999999999875 47888754 443
|
| >2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.77 E-value=3.8e-05 Score=68.78 Aligned_cols=76 Identities=20% Similarity=0.244 Sum_probs=52.8
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHH----HHHHHh
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDD----LDKLFS 78 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~----~~~~~~ 78 (335)
.+++|||+|++|.+|..+++.+...|++|+++++++..... +.+. + . . ...|..+.++ +.++..
T Consensus 169 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~----~~~~-g----~--~-~~~d~~~~~~~~~~~~~~~~ 236 (347)
T 2hcy_A 169 AGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEEL----FRSI-G----G--E-VFIDFTKEKDIVGAVLKATD 236 (347)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHH----HHHT-T----C--C-EEEETTTCSCHHHHHHHHHT
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHH----HHHc-C----C--c-eEEecCccHhHHHHHHHHhC
Confidence 46899999999999999999999999999999986554322 1111 1 1 1 2236664333 333333
Q ss_pred cCCCCEEEEcccc
Q 019795 79 SQKFEAVIHFGAL 91 (335)
Q Consensus 79 ~~~~d~vi~~a~~ 91 (335)
. ++|+||++++.
T Consensus 237 ~-~~D~vi~~~g~ 248 (347)
T 2hcy_A 237 G-GAHGVINVSVS 248 (347)
T ss_dssp S-CEEEEEECSSC
T ss_pred C-CCCEEEECCCc
Confidence 3 79999999874
|
| >3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A* | Back alignment and structure |
|---|
Probab=97.74 E-value=8e-05 Score=65.76 Aligned_cols=116 Identities=9% Similarity=0.150 Sum_probs=68.4
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCC--eEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcC
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGF--KVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQ 80 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~ 80 (335)
.+++|.|+|+ |.+|+.++..|+..|. +++++++++.........+.+... .. ..+.....| . +.++
T Consensus 8 ~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~-~~-~~~~i~~~~---~----~a~~-- 75 (326)
T 3vku_A 8 DHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALP-FT-SPKKIYSAE---Y----SDAK-- 75 (326)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGG-GS-CCCEEEECC---G----GGGT--
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhh-hc-CCcEEEECc---H----HHhc--
Confidence 4578999997 9999999999999886 899999865444444444444321 11 233333322 2 2354
Q ss_pred CCCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCC-EEEEecc
Q 019795 81 KFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCK-KLVFSSS 132 (335)
Q Consensus 81 ~~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~-~~v~~Ss 132 (335)
+.|+||.+||.+... .+.-..+++.|+.....+.+.+.+...+ .++.+|.
T Consensus 76 ~aDiVvi~ag~~~kp--G~tR~dL~~~N~~I~~~i~~~i~~~~p~a~ilvvtN 126 (326)
T 3vku_A 76 DADLVVITAGAPQKP--GETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAAN 126 (326)
T ss_dssp TCSEEEECCCCC------------------CHHHHHHHHHTTTCCSEEEECSS
T ss_pred CCCEEEECCCCCCCC--CchHHHHHHHHHHHHHHHHHHHHhcCCceEEEEccC
Confidence 789999999975322 2233467888999999999999887543 4555553
|
| >3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A* | Back alignment and structure |
|---|
Probab=97.71 E-value=0.00026 Score=62.47 Aligned_cols=118 Identities=15% Similarity=0.095 Sum_probs=76.3
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCCchhhHHhhhhhcCCccccceeEEE-ccCCCHHHHHHHHhc
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGF-KVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHV-GDLRNKDDLDKLFSS 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~-~Dl~d~~~~~~~~~~ 79 (335)
|++++|.|+|+ |.+|..++..|+..|. +|+++++++.........+.+.... ......+.. .| . +.++
T Consensus 5 m~~~kI~viGa-G~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~~~~~-~~~~~~v~~t~d------~-~a~~- 74 (324)
T 3gvi_A 5 MARNKIALIGS-GMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSPV-DGFDAKFTGAND------Y-AAIE- 74 (324)
T ss_dssp -CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHHH-HTCCCCEEEESS------G-GGGT-
T ss_pred CcCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhchhhh-cCCCCEEEEeCC------H-HHHC-
Confidence 45679999998 9999999999999998 9999999776544333344332110 001122221 22 1 3455
Q ss_pred CCCCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCC-EEEEecc
Q 019795 80 QKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCK-KLVFSSS 132 (335)
Q Consensus 80 ~~~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~-~~v~~Ss 132 (335)
+.|+||.+|+.+.... ..-..++..|+.....+.+.+.+...+ .++.+|.
T Consensus 75 -~aDiVIiaag~p~k~G--~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvtN 125 (324)
T 3gvi_A 75 -GADVVIVTAGVPRKPG--MSRDDLLGINLKVMEQVGAGIKKYAPEAFVICITN 125 (324)
T ss_dssp -TCSEEEECCSCCCC-------CHHHHHHHHHHHHHHHHHHHHCTTCEEEECCS
T ss_pred -CCCEEEEccCcCCCCC--CCHHHHHHhhHHHHHHHHHHHHHHCCCeEEEecCC
Confidence 7899999998753222 222356778999999999998887643 5555554
|
| >1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1 | Back alignment and structure |
|---|
Probab=97.69 E-value=0.00044 Score=60.99 Aligned_cols=113 Identities=12% Similarity=0.193 Sum_probs=72.1
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhCCC--eEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCC
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQGGF--KVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQK 81 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~ 81 (335)
+++|.|+|+ |.+|..++..|+..|. +|++++.++.+.......+.+... .. ..+.+. . .+. +.++ +
T Consensus 7 ~~KI~IiGa-G~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~~~~-~~-~~~~i~-~--~~~----~a~~--~ 74 (318)
T 1y6j_A 7 RSKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLP-FM-GQMSLY-A--GDY----SDVK--D 74 (318)
T ss_dssp CCCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCC-CT-TCEEEC-----CG----GGGT--T
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHhHH-hc-CCeEEE-E--CCH----HHhC--C
Confidence 468999998 9999999999999986 899999987665544444544321 10 222222 1 122 2355 7
Q ss_pred CCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCC-EEEEe
Q 019795 82 FEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCK-KLVFS 130 (335)
Q Consensus 82 ~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~-~~v~~ 130 (335)
.|+||.+++.+... ...-..+...|+.....+++.+.+.+.+ .++.+
T Consensus 75 aDvVii~~g~p~k~--g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~ 122 (318)
T 1y6j_A 75 CDVIVVTAGANRKP--GETRLDLAKKNVMIAKEVTQNIMKYYNHGVILVV 122 (318)
T ss_dssp CSEEEECCCC--------CHHHHHHHHHHHHHHHHHHHHHHCCSCEEEEC
T ss_pred CCEEEEcCCCCCCC--CcCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEEe
Confidence 89999999875321 2233467788999999999998887544 44443
|
| >3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A* | Back alignment and structure |
|---|
Probab=97.67 E-value=0.0003 Score=62.03 Aligned_cols=117 Identities=13% Similarity=0.154 Sum_probs=75.3
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCC--CeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGG--FKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~ 79 (335)
|++++|.|+|+ |.+|..++..|+..| .+++++++++.........+.+.. +..+..+.+.. | + .+.++
T Consensus 4 m~~~KI~IIGa-G~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~-~~~~~~~~v~~-~--~----~~a~~- 73 (317)
T 3d0o_A 4 FKGNKVVLIGN-GAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHAT-PYSPTTVRVKA-G--E----YSDCH- 73 (317)
T ss_dssp CCCCEEEEECC-SHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHG-GGSSSCCEEEE-C--C----GGGGT-
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhh-hhcCCCeEEEe-C--C----HHHhC-
Confidence 34569999999 999999999999887 489999886443333233333321 11112333332 2 2 23355
Q ss_pred CCCCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCC-EEEEec
Q 019795 80 QKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCK-KLVFSS 131 (335)
Q Consensus 80 ~~~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~-~~v~~S 131 (335)
+.|+||.+++.+... .+.-..+...|+.....+.+.+.+...+ .++.+|
T Consensus 74 -~aDvVvi~ag~~~~~--g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~t 123 (317)
T 3d0o_A 74 -DADLVVICAGAAQKP--GETRLDLVSKNLKIFKSIVGEVMASKFDGIFLVAT 123 (317)
T ss_dssp -TCSEEEECCCCCCCT--TCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred -CCCEEEECCCCCCCC--CCcHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEec
Confidence 789999999875422 2333466788999899999998887544 444443
|
| >3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis} | Back alignment and structure |
|---|
Probab=97.67 E-value=0.00034 Score=61.67 Aligned_cols=119 Identities=13% Similarity=0.055 Sum_probs=78.8
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcC
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGF-KVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQ 80 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~ 80 (335)
|++++|.|+|+ |.+|+.++..|+..|. +|+++++++.........+.+.... ......+...+ |. +.++
T Consensus 3 m~~~kI~iiGa-G~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~~~~~-~~~~~~v~~t~--d~----~a~~-- 72 (321)
T 3p7m_A 3 MARKKITLVGA-GNIGGTLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQTCPI-EGVDFKVRGTN--DY----KDLE-- 72 (321)
T ss_dssp CCCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTTHHH-HTCCCCEEEES--CG----GGGT--
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCChHHHHHHHHHHHhhhhh-cCCCcEEEEcC--CH----HHHC--
Confidence 45789999996 9999999999999887 9999999776544333344432110 00122222111 22 3455
Q ss_pred CCCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCC-EEEEecc
Q 019795 81 KFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCK-KLVFSSS 132 (335)
Q Consensus 81 ~~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~-~~v~~Ss 132 (335)
+.|+||.+|+.+... ...-..++..|+.....+++.+.+...+ .++.+|.
T Consensus 73 ~aDvVIi~ag~p~k~--G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvtN 123 (321)
T 3p7m_A 73 NSDVVIVTAGVPRKP--GMSRDDLLGINIKVMQTVGEGIKHNCPNAFVICITN 123 (321)
T ss_dssp TCSEEEECCSCCCCT--TCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCS
T ss_pred CCCEEEEcCCcCCCC--CCCHHHHHHHhHHHHHHHHHHHHHHCCCcEEEEecC
Confidence 789999999875322 2334467888999999999998887643 5555543
|
| >1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=97.64 E-value=5.5e-05 Score=67.11 Aligned_cols=76 Identities=16% Similarity=0.135 Sum_probs=52.3
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHH---HHHHHHhc
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKD---DLDKLFSS 79 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~---~~~~~~~~ 79 (335)
.+++|||+||+|.||..+++.+...|++|+++++++.... .+.+.. .. ...|..+++ .+.+....
T Consensus 140 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~----~~~~~g-----~~---~~~~~~~~~~~~~~~~~~~~ 207 (327)
T 1qor_A 140 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQ----SALKAG-----AW---QVINYREEDLVERLKEITGG 207 (327)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHH----HHHHHT-----CS---EEEETTTSCHHHHHHHHTTT
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHH----HHHHcC-----CC---EEEECCCccHHHHHHHHhCC
Confidence 4689999999999999999999999999999988643322 222211 11 223555543 33344333
Q ss_pred CCCCEEEEccc
Q 019795 80 QKFEAVIHFGA 90 (335)
Q Consensus 80 ~~~d~vi~~a~ 90 (335)
.++|+||++++
T Consensus 208 ~~~D~vi~~~g 218 (327)
T 1qor_A 208 KKVRVVYDSVG 218 (327)
T ss_dssp CCEEEEEECSC
T ss_pred CCceEEEECCc
Confidence 47999999988
|
| >1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP} | Back alignment and structure |
|---|
Probab=97.63 E-value=6.7e-05 Score=66.74 Aligned_cols=77 Identities=13% Similarity=0.113 Sum_probs=53.3
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHH---HHHHHHhc
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKD---DLDKLFSS 79 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~---~~~~~~~~ 79 (335)
.+++|+|+||+|.||..+++.+...|++|+++++++.... .+.+.. .. ...|..+.+ .+.++...
T Consensus 145 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~----~~~~~g-----~~---~~~d~~~~~~~~~i~~~~~~ 212 (333)
T 1wly_A 145 PGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAE----TARKLG-----CH---HTINYSTQDFAEVVREITGG 212 (333)
T ss_dssp TTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHH----HHHHHT-----CS---EEEETTTSCHHHHHHHHHTT
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHH----HHHHcC-----CC---EEEECCCHHHHHHHHHHhCC
Confidence 4689999999999999999999999999999998643322 222211 11 223555433 34444443
Q ss_pred CCCCEEEEcccc
Q 019795 80 QKFEAVIHFGAL 91 (335)
Q Consensus 80 ~~~d~vi~~a~~ 91 (335)
.++|+||+++|.
T Consensus 213 ~~~d~vi~~~g~ 224 (333)
T 1wly_A 213 KGVDVVYDSIGK 224 (333)
T ss_dssp CCEEEEEECSCT
T ss_pred CCCeEEEECCcH
Confidence 479999999885
|
| >3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=97.62 E-value=0.00026 Score=62.24 Aligned_cols=119 Identities=16% Similarity=0.109 Sum_probs=75.8
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCC--CCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHh
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGF-KVVLIDNLH--NSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFS 78 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~ 78 (335)
|++++|.|+|+ |.+|+.++..|+..|+ +|+++++++ .........+.+... .......+...+ |. +.++
T Consensus 6 ~~~~kv~ViGa-G~vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~~-~~~~~~~i~~t~--d~----~a~~ 77 (315)
T 3tl2_A 6 IKRKKVSVIGA-GFTGATTAFLLAQKELADVVLVDIPQLENPTKGKALDMLEASP-VQGFDANIIGTS--DY----ADTA 77 (315)
T ss_dssp CCCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHHHHHHHH-HHTCCCCEEEES--CG----GGGT
T ss_pred cCCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccchHHHHHHhhhhHHHhhh-hccCCCEEEEcC--CH----HHhC
Confidence 34578999997 9999999999999999 999999862 222222222222110 000111222111 22 2344
Q ss_pred cCCCCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCC-EEEEecc
Q 019795 79 SQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCK-KLVFSSS 132 (335)
Q Consensus 79 ~~~~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~-~~v~~Ss 132 (335)
+.|+||-+||.+... ...-..++..|+.....+.+.+.+.+.+ .++.+|.
T Consensus 78 --~aDvVIiaag~p~kp--g~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vlvvsN 128 (315)
T 3tl2_A 78 --DSDVVVITAGIARKP--GMSRDDLVATNSKIMKSITRDIAKHSPNAIIVVLTN 128 (315)
T ss_dssp --TCSEEEECCSCCCCT--TCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCS
T ss_pred --CCCEEEEeCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEECCC
Confidence 789999999875322 2344578889999999999998887543 5556654
|
| >2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A* | Back alignment and structure |
|---|
Probab=97.61 E-value=8.2e-05 Score=66.81 Aligned_cols=77 Identities=10% Similarity=0.083 Sum_probs=52.9
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHH---HHHHHHhc
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKD---DLDKLFSS 79 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~---~~~~~~~~ 79 (335)
.+++|||+||+|.||..+++.+...|++|+++++++..... +.+.. .. ...|..+.+ .+.++...
T Consensus 162 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~----~~~~g-----~~---~~~~~~~~~~~~~~~~~~~~ 229 (354)
T 2j8z_A 162 AGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQM----AEKLG-----AA---AGFNYKKEDFSEATLKFTKG 229 (354)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH----HHHHT-----CS---EEEETTTSCHHHHHHHHTTT
T ss_pred CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHH----HHHcC-----Cc---EEEecCChHHHHHHHHHhcC
Confidence 46899999999999999999999999999999986433222 22211 11 224555433 34444433
Q ss_pred CCCCEEEEcccc
Q 019795 80 QKFEAVIHFGAL 91 (335)
Q Consensus 80 ~~~d~vi~~a~~ 91 (335)
.++|+||+++|.
T Consensus 230 ~~~d~vi~~~G~ 241 (354)
T 2j8z_A 230 AGVNLILDCIGG 241 (354)
T ss_dssp SCEEEEEESSCG
T ss_pred CCceEEEECCCc
Confidence 479999999885
|
| >3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A* | Back alignment and structure |
|---|
Probab=97.61 E-value=0.00036 Score=60.51 Aligned_cols=108 Identities=15% Similarity=0.194 Sum_probs=70.6
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCC-CeEEEEecCC------------------CCchhhHHhhhhhcCCccccceeEE
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGG-FKVVLIDNLH------------------NSVPEAVDRVKDLAGPELAKKLEFH 63 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~------------------~~~~~~~~~~~~~~~~~~~~~i~~~ 63 (335)
+.++|+|.|+ |.+|+++++.|+..| -+++++|.+. ++...+.+++.++-+ .-.++.+
T Consensus 35 ~~~~VlVvGa-GGlGs~va~~La~aGVG~i~lvD~D~Ve~sNL~Rq~~~~~diG~~Ka~aa~~~L~~iNP---~v~v~~~ 110 (292)
T 3h8v_A 35 RTFAVAIVGV-GGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNINP---DVLFEVH 110 (292)
T ss_dssp GGCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBC------------CCTTSBHHHHHHHHHHHHCT---TSEEEEE
T ss_pred hCCeEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCccChhhcccccCChhhcCchHHHHHHHHHHhhCC---CcEEEEe
Confidence 4578999998 999999999999998 4688887654 333344444444321 1456667
Q ss_pred EccCCCHHHHHHHHhc---------CCCCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEecc
Q 019795 64 VGDLRNKDDLDKLFSS---------QKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSS 132 (335)
Q Consensus 64 ~~Dl~d~~~~~~~~~~---------~~~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss 132 (335)
..++++.+.+.++++. .++|+||.+... ...-..+-++|.+.+. .+|+.+.
T Consensus 111 ~~~l~~~~~~~~~~~~~~~~~l~~~~~~DlVid~~Dn-----------------~~~R~~in~~c~~~~~-Pli~~gv 170 (292)
T 3h8v_A 111 NYNITTVENFQHFMDRISNGGLEEGKPVDLVLSCVDN-----------------FEARMTINTACNELGQ-TWMESGV 170 (292)
T ss_dssp CCCTTSHHHHHHHHHHHHHBSSSTTBCCSEEEECCSS-----------------HHHHHHHHHHHHHHTC-CEEEEEE
T ss_pred cccCCcHHHHHHHhhhhcccccccCCCCCEEEECCcc-----------------hhhhhHHHHHHHHhCC-CEEEeee
Confidence 7778776667666521 278999976432 2222346667777774 5666544
|
| >1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5 | Back alignment and structure |
|---|
Probab=97.59 E-value=4.8e-05 Score=65.69 Aligned_cols=75 Identities=17% Similarity=0.231 Sum_probs=50.3
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCC
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQK 81 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~ 81 (335)
+++|+++|+|+ |.+|+.+++.|++.|++|++++|+..+.....+.+... ..+ ...|+ +++.+ .+
T Consensus 117 l~~k~vlViGa-Gg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~~------~~~--~~~~~---~~~~~----~~ 180 (271)
T 1nyt_A 117 RPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHT------GSI--QALSM---DELEG----HE 180 (271)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGG------SSE--EECCS---GGGTT----CC
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhcc------CCe--eEecH---HHhcc----CC
Confidence 35789999998 78999999999999999999988754433333322110 111 12232 22221 37
Q ss_pred CCEEEEccccc
Q 019795 82 FEAVIHFGALK 92 (335)
Q Consensus 82 ~d~vi~~a~~~ 92 (335)
+|+||++++..
T Consensus 181 ~DivVn~t~~~ 191 (271)
T 1nyt_A 181 FDLIINATSSG 191 (271)
T ss_dssp CSEEEECCSCG
T ss_pred CCEEEECCCCC
Confidence 99999999874
|
| >2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A* | Back alignment and structure |
|---|
Probab=97.58 E-value=4.3e-05 Score=68.36 Aligned_cols=77 Identities=14% Similarity=0.137 Sum_probs=51.2
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCH----HHHHHHHh
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNK----DDLDKLFS 78 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~----~~~~~~~~ 78 (335)
.+++|||+||+|.+|..+++.+...|++|+++++++.+.. .+.+..+ . . ...|..+. +.+.++..
T Consensus 155 ~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~----~~~~~~g----~--~-~~~d~~~~~~~~~~~~~~~~ 223 (345)
T 2j3h_A 155 EGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVD----LLKTKFG----F--D-DAFNYKEESDLTAALKRCFP 223 (345)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHH----HHHHTSC----C--S-EEEETTSCSCSHHHHHHHCT
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH----HHHHHcC----C--c-eEEecCCHHHHHHHHHHHhC
Confidence 4689999999999999999999999999999988643322 2221111 1 1 12355443 23333332
Q ss_pred cCCCCEEEEcccc
Q 019795 79 SQKFEAVIHFGAL 91 (335)
Q Consensus 79 ~~~~d~vi~~a~~ 91 (335)
.++|+||++++.
T Consensus 224 -~~~d~vi~~~g~ 235 (345)
T 2j3h_A 224 -NGIDIYFENVGG 235 (345)
T ss_dssp -TCEEEEEESSCH
T ss_pred -CCCcEEEECCCH
Confidence 479999998874
|
| >3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A* | Back alignment and structure |
|---|
Probab=97.57 E-value=0.00021 Score=62.62 Aligned_cols=81 Identities=15% Similarity=0.208 Sum_probs=54.7
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCC---CchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHH
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGF-KVVLIDNLHN---SVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLF 77 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~---~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~ 77 (335)
+++|+++|+|+ |.+|+.++..|.+.|. +|++++|+.. +..+..+++.... .......++.+.+.+.+.+
T Consensus 146 l~gk~~lVlGA-GGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~------~~~v~~~~~~~l~~~~~~l 218 (312)
T 3t4e_A 146 MRGKTMVLLGA-GGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENT------DCVVTVTDLADQHAFTEAL 218 (312)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHS------SCEEEEEETTCHHHHHHHH
T ss_pred cCCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhcc------CcceEEechHhhhhhHhhc
Confidence 35789999998 9999999999999998 8999999733 3333333333221 1223344555544445556
Q ss_pred hcCCCCEEEEcccc
Q 019795 78 SSQKFEAVIHFGAL 91 (335)
Q Consensus 78 ~~~~~d~vi~~a~~ 91 (335)
. .+|+|||+...
T Consensus 219 ~--~~DiIINaTp~ 230 (312)
T 3t4e_A 219 A--SADILTNGTKV 230 (312)
T ss_dssp H--HCSEEEECSST
T ss_pred c--CceEEEECCcC
Confidence 5 57999998655
|
| >3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A* | Back alignment and structure |
|---|
Probab=97.57 E-value=0.00029 Score=64.42 Aligned_cols=73 Identities=22% Similarity=0.332 Sum_probs=57.9
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHH-HhcCCC
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKL-FSSQKF 82 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~-~~~~~~ 82 (335)
.++|+|.|. |-+|+.+++.|.+.|+.|+++++++.. .+.+.+ .++.++.+|.++++.+.++ ++ ++
T Consensus 4 ~~~viIiG~-Gr~G~~va~~L~~~g~~vvvId~d~~~----v~~~~~-------~g~~vi~GDat~~~~L~~agi~--~A 69 (413)
T 3l9w_A 4 GMRVIIAGF-GRFGQITGRLLLSSGVKMVVLDHDPDH----IETLRK-------FGMKVFYGDATRMDLLESAGAA--KA 69 (413)
T ss_dssp CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEECCHHH----HHHHHH-------TTCCCEESCTTCHHHHHHTTTT--TC
T ss_pred CCeEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHH----HHHHHh-------CCCeEEEcCCCCHHHHHhcCCC--cc
Confidence 467999997 999999999999999999999986443 233322 4577899999999988876 44 78
Q ss_pred CEEEEccc
Q 019795 83 EAVIHFGA 90 (335)
Q Consensus 83 d~vi~~a~ 90 (335)
|+||-+..
T Consensus 70 ~~viv~~~ 77 (413)
T 3l9w_A 70 EVLINAID 77 (413)
T ss_dssp SEEEECCS
T ss_pred CEEEECCC
Confidence 99987544
|
| >1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A* | Back alignment and structure |
|---|
Probab=97.57 E-value=3.2e-05 Score=64.05 Aligned_cols=35 Identities=26% Similarity=0.410 Sum_probs=31.8
Q ss_pred CeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCC
Q 019795 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHN 39 (335)
Q Consensus 5 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 39 (335)
|+|+|+||+|.+|+++++.|++.|++|++++|++.
T Consensus 1 m~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~ 35 (212)
T 1jay_A 1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREE 35 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHH
T ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 47999999999999999999999999999998644
|
| >2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A* | Back alignment and structure |
|---|
Probab=97.55 E-value=7.8e-05 Score=67.00 Aligned_cols=75 Identities=17% Similarity=0.147 Sum_probs=50.8
Q ss_pred CeEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHH---HHHHHHhcC
Q 019795 5 KNILVTGGAGFIGTHCALQLLQGGF-KVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKD---DLDKLFSSQ 80 (335)
Q Consensus 5 ~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~---~~~~~~~~~ 80 (335)
++|||+||+|.||..+++.+...|+ +|+++++++.... .+.+..+ . . ...|..+.+ .+.++...
T Consensus 162 ~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~----~~~~~~g----~--~-~~~d~~~~~~~~~~~~~~~~- 229 (357)
T 2zb4_A 162 KTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCI----LLTSELG----F--D-AAINYKKDNVAEQLRESCPA- 229 (357)
T ss_dssp CEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHH----HHHHTSC----C--S-EEEETTTSCHHHHHHHHCTT-
T ss_pred cEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHH----HHHHHcC----C--c-eEEecCchHHHHHHHHhcCC-
Confidence 8999999999999999999999999 9999988643222 2221111 1 1 234555432 33333333
Q ss_pred CCCEEEEcccc
Q 019795 81 KFEAVIHFGAL 91 (335)
Q Consensus 81 ~~d~vi~~a~~ 91 (335)
++|+||+++|.
T Consensus 230 ~~d~vi~~~G~ 240 (357)
T 2zb4_A 230 GVDVYFDNVGG 240 (357)
T ss_dssp CEEEEEESCCH
T ss_pred CCCEEEECCCH
Confidence 79999999883
|
| >1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=97.54 E-value=0.00012 Score=65.73 Aligned_cols=77 Identities=17% Similarity=0.203 Sum_probs=52.6
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHH---HHHHHHhc
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKD---DLDKLFSS 79 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~---~~~~~~~~ 79 (335)
.+++|+|+||+|.+|..+++.+...|++|+++++++.... .+.+.. .. ...|..+.+ .+.+....
T Consensus 170 ~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~----~~~~~g-------a~-~~~d~~~~~~~~~~~~~~~~ 237 (351)
T 1yb5_A 170 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQK----IVLQNG-------AH-EVFNHREVNYIDKIKKYVGE 237 (351)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHH----HHHHTT-------CS-EEEETTSTTHHHHHHHHHCT
T ss_pred CcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHH----HHHHcC-------CC-EEEeCCCchHHHHHHHHcCC
Confidence 4689999999999999999999999999999998643322 222211 11 224555543 33344433
Q ss_pred CCCCEEEEcccc
Q 019795 80 QKFEAVIHFGAL 91 (335)
Q Consensus 80 ~~~d~vi~~a~~ 91 (335)
.++|+||++++.
T Consensus 238 ~~~D~vi~~~G~ 249 (351)
T 1yb5_A 238 KGIDIIIEMLAN 249 (351)
T ss_dssp TCEEEEEESCHH
T ss_pred CCcEEEEECCCh
Confidence 479999999874
|
| >4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A* | Back alignment and structure |
|---|
Probab=97.53 E-value=0.00017 Score=64.15 Aligned_cols=77 Identities=19% Similarity=0.262 Sum_probs=51.7
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHH---HHHHHHhc
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKD---DLDKLFSS 79 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~---~~~~~~~~ 79 (335)
++++|||+|++|.||..+++.+...|++|+++++++.+.....+ +. + . . ...|..+.+ .+.++. .
T Consensus 149 ~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~---~~-g----~--~-~~~~~~~~~~~~~~~~~~-~ 216 (336)
T 4b7c_A 149 NGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVE---EL-G----F--D-GAIDYKNEDLAAGLKREC-P 216 (336)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH---TT-C----C--S-EEEETTTSCHHHHHHHHC-T
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH---Hc-C----C--C-EEEECCCHHHHHHHHHhc-C
Confidence 56899999999999999999999999999999986443222211 11 1 1 1 123544433 333333 2
Q ss_pred CCCCEEEEcccc
Q 019795 80 QKFEAVIHFGAL 91 (335)
Q Consensus 80 ~~~d~vi~~a~~ 91 (335)
.++|+||++++.
T Consensus 217 ~~~d~vi~~~g~ 228 (336)
T 4b7c_A 217 KGIDVFFDNVGG 228 (336)
T ss_dssp TCEEEEEESSCH
T ss_pred CCceEEEECCCc
Confidence 479999998874
|
| >1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A* | Back alignment and structure |
|---|
Probab=97.53 E-value=0.00018 Score=63.81 Aligned_cols=114 Identities=16% Similarity=0.156 Sum_probs=71.7
Q ss_pred CeEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCCchhhHHhhhhhcCC-ccccceeEEEccCCCHHHHHHHHhcCCC
Q 019795 5 KNILVTGGAGFIGTHCALQLLQGGF-KVVLIDNLHNSVPEAVDRVKDLAGP-ELAKKLEFHVGDLRNKDDLDKLFSSQKF 82 (335)
Q Consensus 5 ~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~Dl~d~~~~~~~~~~~~~ 82 (335)
++|.|+|| |.+|..++..|+..|+ +|+++++++.........+.+.... ..+.++.. ..++.+.++ +.
T Consensus 10 ~kI~VIGa-G~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~-------t~d~~ea~~--~a 79 (331)
T 1pzg_A 10 KKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRA-------EYSYEAALT--GA 79 (331)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEE-------ECSHHHHHT--TC
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHHHhhhhccCCCCEEEE-------eCCHHHHhC--CC
Confidence 58999998 9999999999999998 9999999765544423333221100 00112211 123444566 78
Q ss_pred CEEEEcccccchhhhhc---ChHHHHHHhHHHHHHHHHHHHHcCCCEEE
Q 019795 83 EAVIHFGALKAVAESVQ---HPFRYFDNNLIGTINLYQAMAKYNCKKLV 128 (335)
Q Consensus 83 d~vi~~a~~~~~~~~~~---~~~~~~~~nv~~~~~l~~~~~~~~~~~~v 128 (335)
|+||-+++.+......+ .-......|+.....+++.+.+...+-++
T Consensus 80 DiVi~a~g~p~~~g~~~~~~~r~dl~~~n~~i~~~i~~~i~~~~p~a~v 128 (331)
T 1pzg_A 80 DCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPKTFI 128 (331)
T ss_dssp SEEEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHCTTCEE
T ss_pred CEEEEccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEE
Confidence 99999997643211100 22355677888888899988877544343
|
| >3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A | Back alignment and structure |
|---|
Probab=97.53 E-value=0.00015 Score=62.75 Aligned_cols=79 Identities=16% Similarity=0.260 Sum_probs=55.2
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcC
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGF-KVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQ 80 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~ 80 (335)
+++|+++|+|+ |.+|+.++..|.+.|. +|++++|+..+.....+.+.... ..+.+...+.. ++.+.+.
T Consensus 125 l~~k~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~-----~~~~i~~~~~~---~l~~~l~-- 193 (283)
T 3jyo_A 125 AKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAV-----GREAVVGVDAR---GIEDVIA-- 193 (283)
T ss_dssp CCCSEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHH-----TSCCEEEECST---THHHHHH--
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhc-----CCceEEEcCHH---HHHHHHh--
Confidence 35789999998 8999999999999998 79999997665555554444321 12233333433 3555666
Q ss_pred CCCEEEEcccc
Q 019795 81 KFEAVIHFGAL 91 (335)
Q Consensus 81 ~~d~vi~~a~~ 91 (335)
.+|+||++...
T Consensus 194 ~~DiVInaTp~ 204 (283)
T 3jyo_A 194 AADGVVNATPM 204 (283)
T ss_dssp HSSEEEECSST
T ss_pred cCCEEEECCCC
Confidence 67999998654
|
| >1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A* | Back alignment and structure |
|---|
Probab=97.52 E-value=0.00014 Score=64.23 Aligned_cols=120 Identities=16% Similarity=0.106 Sum_probs=73.8
Q ss_pred CCCCCeEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCCchhhHHhhhhhcCCccccceeEEE-ccCCCHHHHHHHHh
Q 019795 1 MASEKNILVTGGAGFIGTHCALQLLQGGF-KVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHV-GDLRNKDDLDKLFS 78 (335)
Q Consensus 1 ~~~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~-~Dl~d~~~~~~~~~ 78 (335)
|+.+++|.|+|| |.+|..++..|+..|+ +|+++++++.........+.+.... ......+.. .| + +.++
T Consensus 1 m~~~~kI~VIGa-G~vG~~ia~~la~~g~~~v~L~Di~~~~l~~~~~~l~~~~~~-~~~~~~i~~t~d------~-~al~ 71 (322)
T 1t2d_A 1 MAPKAKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVM-AYSNCKVSGSNT------Y-DDLA 71 (322)
T ss_dssp -CCCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHH-HTCCCCEEEECC------G-GGGT
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhhhh-cCCCcEEEECCC------H-HHhC
Confidence 677889999998 9999999999999997 8999998765544333333322100 001122222 22 2 3455
Q ss_pred cCCCCEEEEcccccchhhhh---cChHHHHHHhHHHHHHHHHHHHHcCCC-EEEEec
Q 019795 79 SQKFEAVIHFGALKAVAESV---QHPFRYFDNNLIGTINLYQAMAKYNCK-KLVFSS 131 (335)
Q Consensus 79 ~~~~d~vi~~a~~~~~~~~~---~~~~~~~~~nv~~~~~l~~~~~~~~~~-~~v~~S 131 (335)
+.|+||-+++.+...... ..-..+...|+.....+.+.+.+...+ .++.+|
T Consensus 72 --~aD~Vi~a~g~p~k~g~~~qe~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~t 126 (322)
T 1t2d_A 72 --GADVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNAFIIVVT 126 (322)
T ss_dssp --TCSEEEECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred --CCCEEEEeCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence 789999999764321100 002245666888888888888776543 444444
|
| >1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1 | Back alignment and structure |
|---|
Probab=97.50 E-value=0.00048 Score=60.70 Aligned_cols=118 Identities=11% Similarity=0.188 Sum_probs=74.2
Q ss_pred CCCCCeEEEEcCCChhhHHHHHHHHhCCC--eEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHh
Q 019795 1 MASEKNILVTGGAGFIGTHCALQLLQGGF--KVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFS 78 (335)
Q Consensus 1 ~~~~~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~ 78 (335)
|.+.++|.|+|+ |.+|..++..|+..+. +++++++.+.........+.+... .. ..+.+.. | +. +.++
T Consensus 2 ~~~~~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~-~~-~~~~v~~-~--~~----~a~~ 71 (318)
T 1ez4_A 2 MPNHQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQA-FT-APKKIYS-G--EY----SDCK 71 (318)
T ss_dssp BTTBCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGG-GS-CCCEEEE-C--CG----GGGT
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHHH-hc-CCeEEEE-C--CH----HHhC
Confidence 445579999999 9999999999998775 899999865444433444444321 11 2333332 2 22 2355
Q ss_pred cCCCCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCC-EEEEecc
Q 019795 79 SQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCK-KLVFSSS 132 (335)
Q Consensus 79 ~~~~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~-~~v~~Ss 132 (335)
+.|+||.+++.+.... +.-..+...|+.....+.+.+.+.+.. .++.+|.
T Consensus 72 --~aDvVii~ag~~~~~g--~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tN 122 (318)
T 1ez4_A 72 --DADLVVITAGAPQKPG--ESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVAAN 122 (318)
T ss_dssp --TCSEEEECCCC------------CHHHHHHHHHHHHHHHHHTTCCSEEEECSS
T ss_pred --CCCEEEECCCCCCCCC--CCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeCC
Confidence 7899999998753222 222356778999999999998887543 5555543
|
| >2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A* | Back alignment and structure |
|---|
Probab=97.49 E-value=0.00049 Score=59.77 Aligned_cols=116 Identities=13% Similarity=0.115 Sum_probs=76.9
Q ss_pred CeEEEEcCCChhhHHHHHHHHhCC--CeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCC
Q 019795 5 KNILVTGGAGFIGTHCALQLLQGG--FKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKF 82 (335)
Q Consensus 5 ~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~ 82 (335)
|||.|+|+ |.||+.++..|..++ -++++++..+.......-.+.+.... .+........+ |.+ .++ +.
T Consensus 1 MKV~IiGa-G~VG~~~a~~l~~~~~~~el~L~Di~~~~~~G~a~DL~h~~~~-~~~~~~i~~~~--d~~----~~~--~a 70 (294)
T 2x0j_A 1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAG-IDKYPKIVGGA--DYS----LLK--GS 70 (294)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHGG-GTCCCEEEEES--CGG----GGT--TC
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCCCcchhhhhhhhccccc-CCCCCeEecCC--CHH----HhC--CC
Confidence 57999996 999999999998876 57999998654444444445442210 01122222221 222 344 78
Q ss_pred CEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCC-EEEEecc
Q 019795 83 EAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCK-KLVFSSS 132 (335)
Q Consensus 83 d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~-~~v~~Ss 132 (335)
|+||-.||.+.- ....-+.+++.|......+.+++.+.+.+ .++.+|.
T Consensus 71 DvVvitAG~prk--pGmtR~dLl~~Na~I~~~i~~~i~~~~p~aivlvvsN 119 (294)
T 2x0j_A 71 EIIVVTAGLARK--PGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVTN 119 (294)
T ss_dssp SEEEECCCCCCC--SSSCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECSS
T ss_pred CEEEEecCCCCC--CCCchHHHHHHHHHHHHHHHHHHHhcCCceEEEEecC
Confidence 999999997532 23455588999999999999999988654 4555554
|
| >4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=97.48 E-value=0.00026 Score=63.19 Aligned_cols=78 Identities=18% Similarity=0.102 Sum_probs=52.5
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCC-HHHHHHHHhcCC
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRN-KDDLDKLFSSQK 81 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d-~~~~~~~~~~~~ 81 (335)
.+++|||+||+|.+|..+++.+...|++|+++++++.+.+.. .+.. . -..+..+ .+ .+.+.++....+
T Consensus 159 ~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~----~~~g-----a-~~v~~~~-~~~~~~v~~~~~~~g 227 (342)
T 4eye_A 159 AGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFV----KSVG-----A-DIVLPLE-EGWAKAVREATGGAG 227 (342)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHH----HHHT-----C-SEEEESS-TTHHHHHHHHTTTSC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH----HhcC-----C-cEEecCc-hhHHHHHHHHhCCCC
Confidence 468999999999999999999999999999999865543222 2211 1 1222223 22 234445444447
Q ss_pred CCEEEEcccc
Q 019795 82 FEAVIHFGAL 91 (335)
Q Consensus 82 ~d~vi~~a~~ 91 (335)
+|+||++++.
T Consensus 228 ~Dvvid~~g~ 237 (342)
T 4eye_A 228 VDMVVDPIGG 237 (342)
T ss_dssp EEEEEESCC-
T ss_pred ceEEEECCch
Confidence 9999999885
|
| >2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=97.47 E-value=0.00015 Score=64.84 Aligned_cols=76 Identities=13% Similarity=0.204 Sum_probs=52.3
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHH---HHHHHHhc
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKD---DLDKLFSS 79 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~---~~~~~~~~ 79 (335)
.+++|||+|++|.+|..+++.+...|++|+++++++.... .+.+.. . . ...|..+.+ .+.++...
T Consensus 166 ~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~----~~~~~g-----a--~-~~~d~~~~~~~~~~~~~~~~ 233 (343)
T 2eih_A 166 PGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLR----RAKALG-----A--D-ETVNYTHPDWPKEVRRLTGG 233 (343)
T ss_dssp TTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHH----HHHHHT-----C--S-EEEETTSTTHHHHHHHHTTT
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHH----HHHhcC-----C--C-EEEcCCcccHHHHHHHHhCC
Confidence 4689999999999999999999999999999988643322 222211 1 1 124655532 34444433
Q ss_pred CCCCEEEEccc
Q 019795 80 QKFEAVIHFGA 90 (335)
Q Consensus 80 ~~~d~vi~~a~ 90 (335)
.++|+||++++
T Consensus 234 ~~~d~vi~~~g 244 (343)
T 2eih_A 234 KGADKVVDHTG 244 (343)
T ss_dssp TCEEEEEESSC
T ss_pred CCceEEEECCC
Confidence 47999999988
|
| >4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ... | Back alignment and structure |
|---|
Probab=97.47 E-value=0.00051 Score=60.74 Aligned_cols=117 Identities=16% Similarity=0.223 Sum_probs=78.5
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCC--eEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcC
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGF--KVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQ 80 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~ 80 (335)
..++|.|+|+ |.+|+.++..|+..|. ++++++++..........+.+..... .....+..+ |. . .++
T Consensus 18 ~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~~~--~~~~i~~~~--d~---~-~~~-- 86 (331)
T 4aj2_A 18 PQNKITVVGV-GAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFL--KTPKIVSSK--DY---S-VTA-- 86 (331)
T ss_dssp CSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGC--SCCEEEECS--SG---G-GGT--
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhhcc--CCCeEEEcC--CH---H-HhC--
Confidence 4679999998 9999999999999886 89999986544444444454432100 111222221 22 2 344
Q ss_pred CCCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCC-EEEEecc
Q 019795 81 KFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCK-KLVFSSS 132 (335)
Q Consensus 81 ~~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~-~~v~~Ss 132 (335)
+.|+||.+||.+.. ..+.-..+++.|+.....+.+.+.+.... .++.+|.
T Consensus 87 ~aDiVvi~aG~~~k--pG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~vlvvtN 137 (331)
T 4aj2_A 87 NSKLVIITAGARQQ--EGESRLNLVQRNVNIFKFIIPNVVKYSPQCKLLIVSN 137 (331)
T ss_dssp TEEEEEECCSCCCC--TTCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECSS
T ss_pred CCCEEEEccCCCCC--CCccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 78999999997532 22344478899999999999999887543 5555554
|
| >2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=97.47 E-value=0.00041 Score=61.86 Aligned_cols=101 Identities=14% Similarity=0.093 Sum_probs=57.6
Q ss_pred CCCCCeEEEEcCCChhhHHHHHHHHhCC-CeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc
Q 019795 1 MASEKNILVTGGAGFIGTHCALQLLQGG-FKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS 79 (335)
Q Consensus 1 ~~~~~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~ 79 (335)
|++|++|.|.||||.+|+.+++.|.+.. .+++.+.+...... ..+..... . .+. ....+.+.+ + +.
T Consensus 1 M~~~~kV~IiGAtG~iG~~llr~L~~~p~~elv~v~s~~~~g~-~~~~~~~~----~-~g~--~~~~~~~~~---~-~~- 67 (345)
T 2ozp_A 1 MTGKKTLSIVGASGYAGGEFLRLALSHPYLEVKQVTSRRFAGE-PVHFVHPN----L-RGR--TNLKFVPPE---K-LE- 67 (345)
T ss_dssp ---CEEEEEETTTSHHHHHHHHHHHTCTTEEEEEEBCSTTTTS-BGGGTCGG----G-TTT--CCCBCBCGG---G-CC-
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHcCCCcEEEEEECchhhCc-hhHHhCch----h-cCc--ccccccchh---H-hc-
Confidence 7778899999999999999999998765 47777765332211 11110000 0 000 011122222 2 33
Q ss_pred CCCCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEecccc
Q 019795 80 QKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSAT 134 (335)
Q Consensus 80 ~~~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~ 134 (335)
++|+||.+++... ...++..+.+.|+ ++|-.|+..
T Consensus 68 -~vDvV~~a~g~~~------------------s~~~a~~~~~aG~-~VId~Sa~~ 102 (345)
T 2ozp_A 68 -PADILVLALPHGV------------------FAREFDRYSALAP-VLVDLSADF 102 (345)
T ss_dssp -CCSEEEECCCTTH------------------HHHTHHHHHTTCS-EEEECSSTT
T ss_pred -CCCEEEEcCCcHH------------------HHHHHHHHHHCCC-EEEEcCccc
Confidence 7999998876532 1235555666775 688888854
|
| >1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A | Back alignment and structure |
|---|
Probab=97.44 E-value=0.00063 Score=57.84 Aligned_cols=110 Identities=21% Similarity=0.243 Sum_probs=67.1
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCC-------------------CchhhHHhhhhhcCCccccceeE
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGF-KVVLIDNLHN-------------------SVPEAVDRVKDLAGPELAKKLEF 62 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~-------------------~~~~~~~~~~~~~~~~~~~~i~~ 62 (335)
+.++|+|.|+ |.+|+++++.|+..|. ++++++.+.- +.....+++.++-+ ...+..
T Consensus 27 ~~~~VlvvG~-GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np---~~~v~~ 102 (251)
T 1zud_1 27 LDSQVLIIGL-GGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNP---DIQLTA 102 (251)
T ss_dssp HTCEEEEECC-STTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCT---TSEEEE
T ss_pred hcCcEEEEcc-CHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCC---CCEEEE
Confidence 4579999998 7799999999999996 6777765431 22222333333211 123444
Q ss_pred EEccCCCHHHHHHHHhcCCCCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccC
Q 019795 63 HVGDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYG 137 (335)
Q Consensus 63 ~~~Dl~d~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg 137 (335)
+..+++ .+.+.++++ ++|+||.+.... ..-..+.++|.+.+. .+|+.++...+|
T Consensus 103 ~~~~~~-~~~~~~~~~--~~DvVi~~~d~~-----------------~~r~~l~~~~~~~~~-p~i~~~~~g~~G 156 (251)
T 1zud_1 103 LQQRLT-GEALKDAVA--RADVVLDCTDNM-----------------ATRQEINAACVALNT-PLITASAVGFGG 156 (251)
T ss_dssp ECSCCC-HHHHHHHHH--HCSEEEECCSSH-----------------HHHHHHHHHHHHTTC-CEEEEEEEBTEE
T ss_pred EeccCC-HHHHHHHHh--cCCEEEECCCCH-----------------HHHHHHHHHHHHhCC-CEEEEeccccce
Confidence 444453 456777887 789999864321 112235566777664 577766655444
|
| >3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis} | Back alignment and structure |
|---|
Probab=97.41 E-value=0.00032 Score=62.54 Aligned_cols=77 Identities=17% Similarity=0.123 Sum_probs=54.0
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCH---HHHHHHHhc
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNK---DDLDKLFSS 79 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~---~~~~~~~~~ 79 (335)
.+++|||+|++|.+|..+++.+...|++|+++++++.+..... ++ . .. . ..|..+. +.+.++...
T Consensus 144 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~l---g-----a~-~--~~~~~~~~~~~~~~~~~~~ 211 (340)
T 3gms_A 144 RNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELL-RL---G-----AA-Y--VIDTSTAPLYETVMELTNG 211 (340)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHH-HH---T-----CS-E--EEETTTSCHHHHHHHHTTT
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-hC---C-----Cc-E--EEeCCcccHHHHHHHHhCC
Confidence 4689999999999999999999889999999998776544332 22 1 11 1 2244332 344455444
Q ss_pred CCCCEEEEcccc
Q 019795 80 QKFEAVIHFGAL 91 (335)
Q Consensus 80 ~~~d~vi~~a~~ 91 (335)
.++|+||++++.
T Consensus 212 ~g~Dvvid~~g~ 223 (340)
T 3gms_A 212 IGADAAIDSIGG 223 (340)
T ss_dssp SCEEEEEESSCH
T ss_pred CCCcEEEECCCC
Confidence 579999999885
|
| >1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A* | Back alignment and structure |
|---|
Probab=97.41 E-value=0.0007 Score=58.88 Aligned_cols=116 Identities=13% Similarity=0.111 Sum_probs=75.6
Q ss_pred CeEEEEcCCChhhHHHHHHHHhCCC--eEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCC
Q 019795 5 KNILVTGGAGFIGTHCALQLLQGGF--KVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKF 82 (335)
Q Consensus 5 ~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~ 82 (335)
|+|.|+|+ |.+|..++..|+..|. +|+++++++.........+.+.... .+....+... +| .+.++ +.
T Consensus 1 MkI~ViGa-G~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~-~~~~~~i~~t--~d----~~a~~--~a 70 (294)
T 1oju_A 1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAG-IDKYPKIVGG--AD----YSLLK--GS 70 (294)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHT-TTCCCEEEEE--SC----GGGGT--TC
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhh-cCCCCEEEEe--CC----HHHhC--CC
Confidence 48999999 9999999999999887 8999998764433222223322110 1112222211 12 23555 78
Q ss_pred CEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCC-EEEEecc
Q 019795 83 EAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCK-KLVFSSS 132 (335)
Q Consensus 83 d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~-~~v~~Ss 132 (335)
|+||.+|+.+... ...-..++..|+.....+.+.+.+.+.+ .++.+|.
T Consensus 71 DiVViaag~~~kp--G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvsN 119 (294)
T 1oju_A 71 EIIVVTAGLARKP--GMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVTN 119 (294)
T ss_dssp SEEEECCCCCCCS--SCCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECSS
T ss_pred CEEEECCCCCCCC--CCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeCC
Confidence 9999999875321 2334567888999999999999887543 5555554
|
| >3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A* | Back alignment and structure |
|---|
Probab=97.40 E-value=0.0002 Score=63.71 Aligned_cols=77 Identities=12% Similarity=0.117 Sum_probs=52.6
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCH---HHHHHHHhc
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNK---DDLDKLFSS 79 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~---~~~~~~~~~ 79 (335)
.+++|||+||+|.+|..+++.+...|++|+++++++.+.. .+.+.. .. ...|..++ +.+.++...
T Consensus 148 ~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~----~~~~~g-----a~---~~~~~~~~~~~~~~~~~~~~ 215 (334)
T 3qwb_A 148 KGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLK----IAKEYG-----AE---YLINASKEDILRQVLKFTNG 215 (334)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHH----HHHHTT-----CS---EEEETTTSCHHHHHHHHTTT
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHH----HHHHcC-----Cc---EEEeCCCchHHHHHHHHhCC
Confidence 4689999999999999999999999999999998544322 222211 11 12243332 344455444
Q ss_pred CCCCEEEEcccc
Q 019795 80 QKFEAVIHFGAL 91 (335)
Q Consensus 80 ~~~d~vi~~a~~ 91 (335)
.++|+||++++.
T Consensus 216 ~g~D~vid~~g~ 227 (334)
T 3qwb_A 216 KGVDASFDSVGK 227 (334)
T ss_dssp SCEEEEEECCGG
T ss_pred CCceEEEECCCh
Confidence 579999999875
|
| >1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5 | Back alignment and structure |
|---|
Probab=97.39 E-value=3.5e-05 Score=67.14 Aligned_cols=80 Identities=13% Similarity=0.200 Sum_probs=50.6
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCC
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQK 81 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~ 81 (335)
+++|+++|||++ .+|+++++.|++.| +|++++|+..+.....+.+..... ... .+.+|+.+. .+.+. +
T Consensus 126 l~~k~vlV~GaG-giG~aia~~L~~~G-~V~v~~r~~~~~~~l~~~~~~~~~----~~~-~~~~d~~~~---~~~~~--~ 193 (287)
T 1nvt_A 126 VKDKNIVIYGAG-GAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLN----KKF-GEEVKFSGL---DVDLD--G 193 (287)
T ss_dssp CCSCEEEEECCS-HHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHT----CCH-HHHEEEECT---TCCCT--T
T ss_pred cCCCEEEEECch-HHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHhhhcc----ccc-ceeEEEeeH---HHhhC--C
Confidence 357899999985 99999999999999 999998865443333333321100 000 012233331 22233 7
Q ss_pred CCEEEEcccccc
Q 019795 82 FEAVIHFGALKA 93 (335)
Q Consensus 82 ~d~vi~~a~~~~ 93 (335)
+|+||++++...
T Consensus 194 ~DilVn~ag~~~ 205 (287)
T 1nvt_A 194 VDIIINATPIGM 205 (287)
T ss_dssp CCEEEECSCTTC
T ss_pred CCEEEECCCCCC
Confidence 899999998743
|
| >2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1 | Back alignment and structure |
|---|
Probab=97.39 E-value=0.00021 Score=63.63 Aligned_cols=35 Identities=26% Similarity=0.399 Sum_probs=26.9
Q ss_pred CCCCCeEEEEcCCChhhHHHHHHHHhCCC---eEEEEe
Q 019795 1 MASEKNILVTGGAGFIGTHCALQLLQGGF---KVVLID 35 (335)
Q Consensus 1 ~~~~~~vlItGatG~iG~~l~~~L~~~g~---~V~~~~ 35 (335)
|+++++|+|.||||.+|+.+++.|.++++ +++.+.
T Consensus 3 M~m~~kV~IiGAtG~iG~~llr~L~~~~~~~~elv~i~ 40 (340)
T 2hjs_A 3 MSQPLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLA 40 (340)
T ss_dssp --CCCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEE
T ss_pred CCCCcEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEEe
Confidence 55567999999999999999999996653 455554
|
| >3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A* | Back alignment and structure |
|---|
Probab=97.38 E-value=0.00027 Score=55.56 Aligned_cols=74 Identities=20% Similarity=0.219 Sum_probs=52.2
Q ss_pred CChhhHHHHHHHHhCCCeEEEEecCCCCchh---hHHhhhhhcCCccccceeEEEccCCCH--HHHHHHHhc----CCCC
Q 019795 13 AGFIGTHCALQLLQGGFKVVLIDNLHNSVPE---AVDRVKDLAGPELAKKLEFHVGDLRNK--DDLDKLFSS----QKFE 83 (335)
Q Consensus 13 tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---~~~~~~~~~~~~~~~~i~~~~~Dl~d~--~~~~~~~~~----~~~d 83 (335)
+|.++...++.|++.|++|++..|....... ..+.+... + .....+.+|++++ +++.++++. .+-|
T Consensus 25 s~~p~~a~a~~La~~Ga~vvi~~r~~~e~~~~~~~~~~~~~~-G----~~~~~i~~Dv~~~~~~~v~~~~~~i~~~~G~d 99 (157)
T 3gxh_A 25 SGLPNEQQFSLLKQAGVDVVINLMPDSSKDAHPDEGKLVTQA-G----MDYVYIPVDWQNPKVEDVEAFFAAMDQHKGKD 99 (157)
T ss_dssp EBCCCHHHHHHHHHTTCCEEEECSCTTSTTSCTTHHHHHHHT-T----CEEEECCCCTTSCCHHHHHHHHHHHHHTTTSC
T ss_pred cCCCCHHHHHHHHHcCCCEEEECCCcccccccccHHHHHHHc-C----CeEEEecCCCCCCCHHHHHHHHHHHHhcCCCC
Confidence 4679999999999999999988776543321 12222221 1 4566778899998 888776653 2339
Q ss_pred EEEEcccc
Q 019795 84 AVIHFGAL 91 (335)
Q Consensus 84 ~vi~~a~~ 91 (335)
++|||||.
T Consensus 100 VLVnnAgg 107 (157)
T 3gxh_A 100 VLVHCLAN 107 (157)
T ss_dssp EEEECSBS
T ss_pred EEEECCCC
Confidence 99999987
|
| >3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A* | Back alignment and structure |
|---|
Probab=97.38 E-value=0.0013 Score=57.67 Aligned_cols=115 Identities=21% Similarity=0.143 Sum_probs=75.1
Q ss_pred CeEEEEcCCChhhHHHHHHHHhC-C--CeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCC
Q 019795 5 KNILVTGGAGFIGTHCALQLLQG-G--FKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQK 81 (335)
Q Consensus 5 ~~vlItGatG~iG~~l~~~L~~~-g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~ 81 (335)
|+|.|+||+|.+|+.++..|..+ + .+++++++.+ ......-.+.+.. .+..+..+.. ++ ..+.++ +
T Consensus 1 mKV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~-~~~G~a~Dl~~~~---~~~~v~~~~~--~~---~~~~~~--~ 69 (312)
T 3hhp_A 1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSHIP---TAVKIKGFSG--ED---ATPALE--G 69 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSST-THHHHHHHHHTSC---SSEEEEEECS--SC---CHHHHT--T
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCC-CchhHHHHhhCCC---CCceEEEecC--CC---cHHHhC--C
Confidence 58999999999999999999875 4 5799998865 3333333343321 1111221111 11 123455 7
Q ss_pred CCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCC-EEEEecc
Q 019795 82 FEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCK-KLVFSSS 132 (335)
Q Consensus 82 ~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~-~~v~~Ss 132 (335)
.|+||-+||.+.. ..+.-..+++.|+.....+.+.+.+...+ .++.+|.
T Consensus 70 aDivii~ag~~rk--pG~~R~dll~~N~~I~~~i~~~i~~~~p~a~vlvvtN 119 (312)
T 3hhp_A 70 ADVVLISAGVARK--PGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIITN 119 (312)
T ss_dssp CSEEEECCSCSCC--TTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECSS
T ss_pred CCEEEEeCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEecC
Confidence 8999999987532 23445578899999999999998887543 5656554
|
| >3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A* | Back alignment and structure |
|---|
Probab=97.37 E-value=0.00053 Score=62.64 Aligned_cols=72 Identities=18% Similarity=0.286 Sum_probs=56.1
Q ss_pred CCCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcC
Q 019795 1 MASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQ 80 (335)
Q Consensus 1 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~ 80 (335)
||++++|+|+|+ |.+|+.+++.+.+.|++|++++ .+....... . .....+.+|..|.+.+.++++
T Consensus 21 mm~~~~I~ilGg-G~lg~~l~~aa~~lG~~v~~~d-~~~~p~~~~---a--------d~~~~~~~~~~d~~~l~~~a~-- 85 (403)
T 3k5i_A 21 MWNSRKVGVLGG-GQLGRMLVESANRLNIQVNVLD-ADNSPAKQI---S--------AHDGHVTGSFKEREAVRQLAK-- 85 (403)
T ss_dssp CCSCCEEEEECC-SHHHHHHHHHHHHHTCEEEEEE-STTCTTGGG---C--------CSSCCEESCTTCHHHHHHHHT--
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEE-CCCCcHHHh---c--------cccceeecCCCCHHHHHHHHH--
Confidence 677899999997 8999999999999999999998 544332211 1 122457789999999999998
Q ss_pred CCCEEEE
Q 019795 81 KFEAVIH 87 (335)
Q Consensus 81 ~~d~vi~ 87 (335)
.+|+|+-
T Consensus 86 ~~d~i~~ 92 (403)
T 3k5i_A 86 TCDVVTA 92 (403)
T ss_dssp TCSEEEE
T ss_pred hCCEEEE
Confidence 6788764
|
| >2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A | Back alignment and structure |
|---|
Probab=97.36 E-value=0.00017 Score=64.39 Aligned_cols=97 Identities=12% Similarity=0.106 Sum_probs=57.8
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCC-----C-eEEEEecCCCCch---hhHHhhhhhcCCccccceeEEEccCCCHHHH
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGG-----F-KVVLIDNLHNSVP---EAVDRVKDLAGPELAKKLEFHVGDLRNKDDL 73 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g-----~-~V~~~~r~~~~~~---~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~ 73 (335)
+|++|.|.||||.+|+.|++.|.+.+ . +++.+.+...... .....+... ..+.+ .|+ +.+
T Consensus 8 ~m~kVaIvGATG~vG~~llr~L~~~~~~~~~~~ei~~l~s~~~agk~~~~~~~~l~~~------~~~~~--~~~-~~~-- 76 (352)
T 2nqt_A 8 NATKVAVAGASGYAGGEILRLLLGHPAYADGRLRIGALTAATSAGSTLGEHHPHLTPL------AHRVV--EPT-EAA-- 76 (352)
T ss_dssp SCEEEEEETTTSHHHHHHHHHHHTCHHHHTTSEEEEEEEESSCTTSBGGGTCTTCGGG------TTCBC--EEC-CHH--
T ss_pred cCCEEEEECCCCHHHHHHHHHHHcCCCCCCccEEEEEEECCCcCCCchhhhccccccc------ceeee--ccC-CHH--
Confidence 46799999999999999999999877 3 6777654322111 000001000 11222 122 222
Q ss_pred HHHHhcCCCCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEecccc
Q 019795 74 DKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSAT 134 (335)
Q Consensus 74 ~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~ 134 (335)
.+. ++|+||.+.+... +..++..+ +.|+ ++|-+|+..
T Consensus 77 --~~~--~~DvVf~alg~~~------------------s~~~~~~~-~~G~-~vIDlSa~~ 113 (352)
T 2nqt_A 77 --VLG--GHDAVFLALPHGH------------------SAVLAQQL-SPET-LIIDCGADF 113 (352)
T ss_dssp --HHT--TCSEEEECCTTSC------------------CHHHHHHS-CTTS-EEEECSSTT
T ss_pred --Hhc--CCCEEEECCCCcc------------------hHHHHHHH-hCCC-EEEEECCCc
Confidence 244 6899998876532 12356666 6674 788888865
|
| >4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A* | Back alignment and structure |
|---|
Probab=97.34 E-value=0.00013 Score=63.33 Aligned_cols=44 Identities=30% Similarity=0.400 Sum_probs=37.7
Q ss_pred CCCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhH
Q 019795 1 MASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAV 45 (335)
Q Consensus 1 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~ 45 (335)
||++++|.|.|+ |.+|+.+++.|++.|++|++.++++.......
T Consensus 1 Mm~~~kV~VIGa-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~ 44 (283)
T 4e12_A 1 MTGITNVTVLGT-GVLGSQIAFQTAFHGFAVTAYDINTDALDAAK 44 (283)
T ss_dssp CCSCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHH
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHH
Confidence 788899999997 99999999999999999999998765544433
|
| >3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A* | Back alignment and structure |
|---|
Probab=97.31 E-value=0.00024 Score=62.88 Aligned_cols=77 Identities=17% Similarity=0.080 Sum_probs=52.7
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCH---HHHHHHHhc
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNK---DDLDKLFSS 79 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~---~~~~~~~~~ 79 (335)
.+++|||+||+|.+|..+++.+...|++|+++++++.+.+. +.+.. .. ...|..+. +.+.++...
T Consensus 140 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~----~~~~G-----a~---~~~~~~~~~~~~~~~~~~~~ 207 (325)
T 3jyn_A 140 PGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAH----AKALG-----AW---ETIDYSHEDVAKRVLELTDG 207 (325)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHH----HHHHT-----CS---EEEETTTSCHHHHHHHHTTT
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHH----HHHcC-----CC---EEEeCCCccHHHHHHHHhCC
Confidence 46899999999999999999999999999999986443322 22211 11 12244333 344454444
Q ss_pred CCCCEEEEcccc
Q 019795 80 QKFEAVIHFGAL 91 (335)
Q Consensus 80 ~~~d~vi~~a~~ 91 (335)
.++|+||++++.
T Consensus 208 ~g~Dvvid~~g~ 219 (325)
T 3jyn_A 208 KKCPVVYDGVGQ 219 (325)
T ss_dssp CCEEEEEESSCG
T ss_pred CCceEEEECCCh
Confidence 579999999885
|
| >3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber} | Back alignment and structure |
|---|
Probab=97.31 E-value=0.0014 Score=57.54 Aligned_cols=116 Identities=9% Similarity=0.032 Sum_probs=74.1
Q ss_pred CeEEEEcCCChhhHHHHHHHHhCCC--eEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCC
Q 019795 5 KNILVTGGAGFIGTHCALQLLQGGF--KVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKF 82 (335)
Q Consensus 5 ~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~ 82 (335)
|+|.|+|+ |.+|+.++..|+..|. +++++++++.........+.+.... ......+...| +. +.++ +.
T Consensus 1 Mkv~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~-~~~~~~v~~~~--~~----~a~~--~a 70 (314)
T 3nep_X 1 MKVTVIGA-GNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPI-HGFDTRVTGTN--DY----GPTE--DS 70 (314)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHHH-HTCCCEEEEES--SS----GGGT--TC
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhccccc-cCCCcEEEECC--CH----HHhC--CC
Confidence 58999997 9999999999999886 8999999776544333344432110 00122332222 21 2455 78
Q ss_pred CEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCC-EEEEecc
Q 019795 83 EAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCK-KLVFSSS 132 (335)
Q Consensus 83 d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~-~~v~~Ss 132 (335)
|+||.+|+.+... ...-..+++.|+.....+.+.+.+.+.+ .++.+|.
T Consensus 71 DvVii~ag~~~kp--G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvtN 119 (314)
T 3nep_X 71 DVCIITAGLPRSP--GMSRDDLLAKNTEIVGGVTEQFVEGSPDSTIIVVAN 119 (314)
T ss_dssp SEEEECCCC---------CHHHHHHHHHHHHHHHHHHHTTCTTCEEEECCS
T ss_pred CEEEECCCCCCCC--CCCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEecCC
Confidence 9999999975322 2334477888999999999999887543 4555553
|
| >3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=97.30 E-value=0.0004 Score=62.11 Aligned_cols=76 Identities=13% Similarity=0.152 Sum_probs=51.6
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCH---HHHHHHHhcC
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNK---DDLDKLFSSQ 80 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~---~~~~~~~~~~ 80 (335)
+++|+|+||+|.+|..+++.+...|++|+++++++.+.+.. .+.. .. .. .|..+. +.+.++....
T Consensus 165 ~~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~----~~~G-----a~-~~--~~~~~~~~~~~v~~~~~~~ 232 (349)
T 3pi7_A 165 EKAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALL----KDIG-----AA-HV--LNEKAPDFEATLREVMKAE 232 (349)
T ss_dssp CSEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHH----HHHT-----CS-EE--EETTSTTHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH----HHcC-----CC-EE--EECCcHHHHHHHHHHhcCC
Confidence 37899999999999999999998999999999865543322 2211 11 12 233332 3344444334
Q ss_pred CCCEEEEcccc
Q 019795 81 KFEAVIHFGAL 91 (335)
Q Consensus 81 ~~d~vi~~a~~ 91 (335)
++|+||++++.
T Consensus 233 g~D~vid~~g~ 243 (349)
T 3pi7_A 233 QPRIFLDAVTG 243 (349)
T ss_dssp CCCEEEESSCH
T ss_pred CCcEEEECCCC
Confidence 79999999875
|
| >1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A | Back alignment and structure |
|---|
Probab=97.30 E-value=0.00025 Score=63.82 Aligned_cols=76 Identities=18% Similarity=0.284 Sum_probs=53.7
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCC
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKF 82 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~ 82 (335)
+.++|+|+|+ |.+|+.+++.|...|++|++++|++.+.....+ ... ..+.. +..+.+++.+.+. ++
T Consensus 166 ~~~~VlViGa-GgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~----~~~----~~~~~---~~~~~~~~~~~~~--~~ 231 (361)
T 1pjc_A 166 KPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLET----LFG----SRVEL---LYSNSAEIETAVA--EA 231 (361)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH----HHG----GGSEE---EECCHHHHHHHHH--TC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHH----hhC----ceeEe---eeCCHHHHHHHHc--CC
Confidence 4589999999 999999999999999999999987544332221 111 12212 2234556777776 78
Q ss_pred CEEEEccccc
Q 019795 83 EAVIHFGALK 92 (335)
Q Consensus 83 d~vi~~a~~~ 92 (335)
|+||++++..
T Consensus 232 DvVI~~~~~~ 241 (361)
T 1pjc_A 232 DLLIGAVLVP 241 (361)
T ss_dssp SEEEECCCCT
T ss_pred CEEEECCCcC
Confidence 9999998764
|
| >2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus} | Back alignment and structure |
|---|
Probab=97.30 E-value=0.00033 Score=61.22 Aligned_cols=75 Identities=13% Similarity=0.190 Sum_probs=51.6
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCC
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGF-KVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQK 81 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~ 81 (335)
++++|+|+|+ |.+|+.++..|++.|+ +|++.+|+..+.....+.+ + .... ++.+.+++.+.+. .
T Consensus 140 ~~~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~----~----~~~~----~~~~~~~~~~~~~--~ 204 (297)
T 2egg_A 140 DGKRILVIGA-GGGARGIYFSLLSTAAERIDMANRTVEKAERLVREG----D----ERRS----AYFSLAEAETRLA--E 204 (297)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHS----C----SSSC----CEECHHHHHHTGG--G
T ss_pred CCCEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHh----h----hccC----ceeeHHHHHhhhc--c
Confidence 5789999998 8899999999999997 8999998654433322221 1 1000 1112345666666 7
Q ss_pred CCEEEEccccc
Q 019795 82 FEAVIHFGALK 92 (335)
Q Consensus 82 ~d~vi~~a~~~ 92 (335)
+|+||++.+..
T Consensus 205 aDivIn~t~~~ 215 (297)
T 2egg_A 205 YDIIINTTSVG 215 (297)
T ss_dssp CSEEEECSCTT
T ss_pred CCEEEECCCCC
Confidence 89999998764
|
| >1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A | Back alignment and structure |
|---|
Probab=97.29 E-value=0.00038 Score=61.93 Aligned_cols=71 Identities=21% Similarity=0.206 Sum_probs=55.5
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHH-HhcCCC
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKL-FSSQKF 82 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~-~~~~~~ 82 (335)
.++++|.|+ |-+|+.+++.|.+.|+ |+++++++... + +.+ .++.++.+|.+|++.++++ ++ ++
T Consensus 115 ~~~viI~G~-G~~g~~l~~~L~~~g~-v~vid~~~~~~----~-~~~-------~~~~~i~gd~~~~~~L~~a~i~--~a 178 (336)
T 1lnq_A 115 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRK----K-VLR-------SGANFVHGDPTRVSDLEKANVR--GA 178 (336)
T ss_dssp -CEEEEESC-CHHHHHHHTTGGGSCE-EEEESCGGGHH----H-HHH-------TTCEEEESCTTSHHHHHHTCST--TE
T ss_pred cCCEEEECC-cHHHHHHHHHHHhCCc-EEEEeCChhhh----h-HHh-------CCcEEEEeCCCCHHHHHhcChh--hc
Confidence 357999997 9999999999999999 99998754432 2 221 4678999999999988876 55 77
Q ss_pred CEEEEccc
Q 019795 83 EAVIHFGA 90 (335)
Q Consensus 83 d~vi~~a~ 90 (335)
|.|+-+.+
T Consensus 179 ~~vi~~~~ 186 (336)
T 1lnq_A 179 RAVIVDLE 186 (336)
T ss_dssp EEEEECCS
T ss_pred cEEEEcCC
Confidence 88886543
|
| >4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major} | Back alignment and structure |
|---|
Probab=97.29 E-value=0.0026 Score=56.52 Aligned_cols=118 Identities=19% Similarity=0.157 Sum_probs=74.9
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCC-------eEEEEecCCCC--chhhHHhhhhhcCCccccceeEEEccCCCHHHH
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGF-------KVVLIDNLHNS--VPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDL 73 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~-------~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~ 73 (335)
+..+|.|+||+|.||+.|+..|..... ++.+++..+.. .....-++.+...+ .....+..+ | .
T Consensus 23 ~~vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~~~~~Gva~DL~~~~~~---~~~~~~~~~--~---~ 94 (345)
T 4h7p_A 23 SAVKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPALKALAGVEAELEDCAFP---LLDKVVVTA--D---P 94 (345)
T ss_dssp CCEEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTTCT---TEEEEEEES--C---H
T ss_pred CCCEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCccccchhhhhhhhhcCcc---CCCcEEEcC--C---h
Confidence 445899999999999999999987532 68888764321 11222234432211 111222221 2 3
Q ss_pred HHHHhcCCCCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcC-CC-EEEEecc
Q 019795 74 DKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYN-CK-KLVFSSS 132 (335)
Q Consensus 74 ~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~-~~v~~Ss 132 (335)
.+.++ +.|+||-+||.+.- ..+.-+++++.|......+.+++.+.. .. .++.+|.
T Consensus 95 ~~a~~--~advVvi~aG~prk--pGmtR~DLl~~Na~I~~~~~~~i~~~a~~~~~vlvvsN 151 (345)
T 4h7p_A 95 RVAFD--GVAIAIMCGAFPRK--AGMERKDLLEMNARIFKEQGEAIAAVAASDCRVVVVGN 151 (345)
T ss_dssp HHHTT--TCSEEEECCCCCCC--TTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred HHHhC--CCCEEEECCCCCCC--CCCCHHHHHHHhHHHHHHHHHHHHhhccCceEEEEeCC
Confidence 34566 78999999998532 234455889999999999999988753 22 4555554
|
| >2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans} | Back alignment and structure |
|---|
Probab=97.26 E-value=0.0013 Score=57.69 Aligned_cols=113 Identities=16% Similarity=0.227 Sum_probs=66.6
Q ss_pred CeEEEEcCCChhhHHHHHHHHhCCC--eEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCC
Q 019795 5 KNILVTGGAGFIGTHCALQLLQGGF--KVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKF 82 (335)
Q Consensus 5 ~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~ 82 (335)
|+|.|+|+ |.+|..++..|+..|+ +|+++++++.........+.+... ......+.. + +. +.++ +.
T Consensus 1 mkI~VIGa-G~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~l~~~~~--~~~~~~i~~-~--~~----~a~~--~a 68 (304)
T 2v6b_A 1 MKVGVVGT-GFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDIAHAAP--VSHGTRVWH-G--GH----SELA--DA 68 (304)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHTTSCC--TTSCCEEEE-E--CG----GGGT--TC
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHhhhhhhh--hcCCeEEEE-C--CH----HHhC--CC
Confidence 48999998 9999999999999998 999999865333222222222111 001222222 1 22 2355 78
Q ss_pred CEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCC-EEEEec
Q 019795 83 EAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCK-KLVFSS 131 (335)
Q Consensus 83 d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~-~~v~~S 131 (335)
|+||.+++.+.... +.-..+...|+.....+++.+.+.... .++.+|
T Consensus 69 DvVIi~~~~~~~~g--~~r~dl~~~n~~i~~~i~~~i~~~~p~~~vi~~t 116 (304)
T 2v6b_A 69 QVVILTAGANQKPG--ESRLDLLEKNADIFRELVPQITRAAPDAVLLVTS 116 (304)
T ss_dssp SEEEECC--------------CHHHHHHHHHHHHHHHHHHCSSSEEEECS
T ss_pred CEEEEcCCCCCCCC--CcHHHHHHhHHHHHHHHHHHHHHhCCCeEEEEec
Confidence 99999987643211 222356677888888999988876543 444444
|
| >3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1 | Back alignment and structure |
|---|
Probab=97.25 E-value=0.0014 Score=57.68 Aligned_cols=116 Identities=12% Similarity=0.061 Sum_probs=76.0
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCC--eEEEEecCCCCchhhHHhhhhhcCCccccceeEE-EccCCCHHHHHHHHhc
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGF--KVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFH-VGDLRNKDDLDKLFSS 79 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~Dl~d~~~~~~~~~~ 79 (335)
..++|.|+|+ |.+|+.++..|+..|. +|+++++++.........+.+..... ....+. ..|.. . ++
T Consensus 20 ~~~kV~ViGa-G~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~~~--~~~~i~~t~d~~------~-~~- 88 (330)
T 3ldh_A 20 SYNKITVVGC-DAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSLFL--HTAKIVSGKDYS------V-SA- 88 (330)
T ss_dssp CCCEEEEEST-THHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGGGS--CCSEEEEESSSC------S-CS-
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhhcc--cCCeEEEcCCHH------H-hC-
Confidence 3578999999 9999999999999886 89999986554444333444321100 111222 22332 2 44
Q ss_pred CCCCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCC-EEEEecc
Q 019795 80 QKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCK-KLVFSSS 132 (335)
Q Consensus 80 ~~~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~-~~v~~Ss 132 (335)
+.|+||-+||.+... .+.-.+.+..|+.....+.+.+.+.+.. .++.+|.
T Consensus 89 -daDiVIitaG~p~kp--G~tR~dll~~N~~I~k~i~~~I~k~~P~a~ilvvtN 139 (330)
T 3ldh_A 89 -GSKLVVITAGARQQE--GESRLNLVQRNVNIFKFIIPNIVKHSPDCLKELHPE 139 (330)
T ss_dssp -SCSEEEECCSCCCCS--SCCTTGGGHHHHHHHHHHHHHHHHHCTTCEEEECSS
T ss_pred -CCCEEEEeCCCCCCC--CCCHHHHHHhhHHHHHHHHHHHHhhCCCceEEeCCC
Confidence 789999999975322 2333467788999999999998887544 4555553
|
| >4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=97.25 E-value=0.00062 Score=61.00 Aligned_cols=76 Identities=16% Similarity=0.151 Sum_probs=52.4
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCH---HHHHHHHhc
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNK---DDLDKLFSS 79 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~---~~~~~~~~~ 79 (335)
.+++|||+||+|.+|..+++.+...|++|+++++++.+... +.+.. .. .. .|..+. +.+.++. .
T Consensus 167 ~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~----~~~lG-----a~-~~--~~~~~~~~~~~~~~~~-~ 233 (353)
T 4dup_A 167 EGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEA----CERLG-----AK-RG--INYRSEDFAAVIKAET-G 233 (353)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHH----HHHHT-----CS-EE--EETTTSCHHHHHHHHH-S
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHH----HHhcC-----CC-EE--EeCCchHHHHHHHHHh-C
Confidence 46799999999999999999999999999999986543322 22221 11 12 243332 3444444 4
Q ss_pred CCCCEEEEcccc
Q 019795 80 QKFEAVIHFGAL 91 (335)
Q Consensus 80 ~~~d~vi~~a~~ 91 (335)
.++|+||++++.
T Consensus 234 ~g~Dvvid~~g~ 245 (353)
T 4dup_A 234 QGVDIILDMIGA 245 (353)
T ss_dssp SCEEEEEESCCG
T ss_pred CCceEEEECCCH
Confidence 579999999885
|
| >1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A* | Back alignment and structure |
|---|
Probab=97.24 E-value=0.00038 Score=62.20 Aligned_cols=77 Identities=22% Similarity=0.275 Sum_probs=52.1
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhC-CCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHH---HHHHHh
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQG-GFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDD---LDKLFS 78 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~---~~~~~~ 78 (335)
.+++|||+|++|.+|..+++.+... |++|+++++++.... .+.+.. .. ...|..+.+. +.++..
T Consensus 170 ~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~----~~~~~g-----~~---~~~~~~~~~~~~~~~~~~~ 237 (347)
T 1jvb_A 170 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVE----AAKRAG-----AD---YVINASMQDPLAEIRRITE 237 (347)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHH----HHHHHT-----CS---EEEETTTSCHHHHHHHHTT
T ss_pred CCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHH----HHHHhC-----CC---EEecCCCccHHHHHHHHhc
Confidence 4689999999999999999999998 999999988643322 222221 11 1234444332 444443
Q ss_pred cCCCCEEEEcccc
Q 019795 79 SQKFEAVIHFGAL 91 (335)
Q Consensus 79 ~~~~d~vi~~a~~ 91 (335)
..++|+||++++.
T Consensus 238 ~~~~d~vi~~~g~ 250 (347)
T 1jvb_A 238 SKGVDAVIDLNNS 250 (347)
T ss_dssp TSCEEEEEESCCC
T ss_pred CCCceEEEECCCC
Confidence 1379999999885
|
| >2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A | Back alignment and structure |
|---|
Probab=97.23 E-value=0.0004 Score=61.32 Aligned_cols=119 Identities=17% Similarity=0.106 Sum_probs=71.3
Q ss_pred CCCCCeEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCCchhhHHhhhhhcC-CccccceeEEEccCCCHHHHHHHHh
Q 019795 1 MASEKNILVTGGAGFIGTHCALQLLQGGF-KVVLIDNLHNSVPEAVDRVKDLAG-PELAKKLEFHVGDLRNKDDLDKLFS 78 (335)
Q Consensus 1 ~~~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~Dl~d~~~~~~~~~ 78 (335)
|-++++|.|+|+ |.+|+.++..|+..|+ +|+++++++.........+.+... ......+.. ..| . +.++
T Consensus 1 M~~~~kI~VIGa-G~~G~~ia~~la~~g~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~-t~d------~-~a~~ 71 (317)
T 2ewd_A 1 MIERRKIAVIGS-GQIGGNIAYIVGKDNLADVVLFDIAEGIPQGKALDITHSMVMFGSTSKVIG-TDD------Y-ADIS 71 (317)
T ss_dssp CCCCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEE-ESC------G-GGGT
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCchHHHHHHHHHHhhhhhcCCCcEEEE-CCC------H-HHhC
Confidence 666789999998 9999999999999998 999999976544332212211100 000012211 122 2 2345
Q ss_pred cCCCCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCC-EEEEecc
Q 019795 79 SQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCK-KLVFSSS 132 (335)
Q Consensus 79 ~~~~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~-~~v~~Ss 132 (335)
+.|+||-+++.+.... ..-.+....|......+++.+.+.... .++.+|.
T Consensus 72 --~aDiVi~avg~p~~~g--~~r~d~~~~~~~i~~~i~~~i~~~~~~~iii~~sN 122 (317)
T 2ewd_A 72 --GSDVVIITASIPGRPK--DDRSELLFGNARILDSVAEGVKKYCPNAFVICITN 122 (317)
T ss_dssp --TCSEEEECCCCSSCCS--SCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECCS
T ss_pred --CCCEEEEeCCCCCCCC--CcHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEeCC
Confidence 7899999987643221 112234555777777788877765433 4555554
|
| >3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A | Back alignment and structure |
|---|
Probab=97.22 E-value=0.0014 Score=59.16 Aligned_cols=70 Identities=24% Similarity=0.322 Sum_probs=54.7
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCC
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQK 81 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~ 81 (335)
+++|+|+|+|+ |.+|+.+++.+.+.|++|++++..+....... .-..+..|..|.+.+.++++ .
T Consensus 10 ~~~~~IlIlG~-G~lg~~la~aa~~lG~~viv~d~~~~~p~~~~-------------ad~~~~~~~~d~~~l~~~~~--~ 73 (377)
T 3orq_A 10 KFGATIGIIGG-GQLGKMMAQSAQKMGYKVVVLDPSEDCPCRYV-------------AHEFIQAKYDDEKALNQLGQ--K 73 (377)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCTTCTTGGG-------------SSEEEECCTTCHHHHHHHHH--H
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECCCCChhhhh-------------CCEEEECCCCCHHHHHHHHH--h
Confidence 45689999997 89999999999999999999987654332111 11356789999999999988 6
Q ss_pred CCEEEE
Q 019795 82 FEAVIH 87 (335)
Q Consensus 82 ~d~vi~ 87 (335)
+|+|.-
T Consensus 74 ~dvi~~ 79 (377)
T 3orq_A 74 CDVITY 79 (377)
T ss_dssp CSEEEE
T ss_pred CCccee
Confidence 888753
|
| >1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A | Back alignment and structure |
|---|
Probab=97.21 E-value=0.00084 Score=60.17 Aligned_cols=102 Identities=18% Similarity=0.165 Sum_probs=58.0
Q ss_pred CCCCCeEEEEcCCChhhHHHHHHHHhCC-CeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc
Q 019795 1 MASEKNILVTGGAGFIGTHCALQLLQGG-FKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS 79 (335)
Q Consensus 1 ~~~~~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~ 79 (335)
||++++|.|.||+|.+|+.+++.|.+.. .+++++.................. ..+ ..|+.-.+ .+.++
T Consensus 13 ~M~~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~~~~~g~~~~~~~~~~~-----~~v---~~dl~~~~--~~~~~- 81 (359)
T 1xyg_A 13 PEKDIRIGLLGASGYTGAEIVRLLANHPHFQVTLMTADRKAGQSMESVFPHLR-----AQK---LPTLVSVK--DADFS- 81 (359)
T ss_dssp --CCEEEEEECCSSHHHHHHHHHHHTCSSEEEEEEBCSTTTTSCHHHHCGGGT-----TSC---CCCCBCGG--GCCGG-
T ss_pred cccCcEEEEECcCCHHHHHHHHHHHcCCCcEEEEEeCchhcCCCHHHhCchhc-----Ccc---cccceecc--hhHhc-
Confidence 3455789999999999999999999875 578877654322111111111000 111 12332222 33444
Q ss_pred CCCCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEecccc
Q 019795 80 QKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSAT 134 (335)
Q Consensus 80 ~~~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~ 134 (335)
++|+||-+.+.... ...+..+ +.|+ ++|-.|+..
T Consensus 82 -~vDvVf~atp~~~s------------------~~~a~~~-~aG~-~VId~sa~~ 115 (359)
T 1xyg_A 82 -TVDAVFCCLPHGTT------------------QEIIKEL-PTAL-KIVDLSADF 115 (359)
T ss_dssp -GCSEEEECCCTTTH------------------HHHHHTS-CTTC-EEEECSSTT
T ss_pred -CCCEEEEcCCchhH------------------HHHHHHH-hCCC-EEEECCccc
Confidence 78999988765321 1244455 5565 688888754
|
| >4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A | Back alignment and structure |
|---|
Probab=97.20 E-value=0.00058 Score=63.29 Aligned_cols=37 Identities=19% Similarity=0.211 Sum_probs=32.7
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCC
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHN 39 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 39 (335)
.+++|||+||+|.||..+++.+...|.+|+++++++.
T Consensus 220 ~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~ 256 (447)
T 4a0s_A 220 QGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQ 256 (447)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHH
Confidence 4688999999999999999999999999999887533
|
| >2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A* | Back alignment and structure |
|---|
Probab=97.20 E-value=0.0024 Score=56.40 Aligned_cols=116 Identities=8% Similarity=0.138 Sum_probs=74.8
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCC--eEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcC
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGF--KVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQ 80 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~ 80 (335)
++++|.|+|+ |.+|..++..|+..+. +++++++.+.........+.+... . ...+.+.. | +. +.++
T Consensus 8 ~~~KI~IiGa-G~vG~~la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~-~-~~~~~i~~-~--~~----~a~~-- 75 (326)
T 2zqz_A 8 DHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNALP-F-TSPKKIYS-A--EY----SDAK-- 75 (326)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGG-G-SCCCEEEE-C--CG----GGGG--
T ss_pred CCCEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHHHHH-h-cCCeEEEE-C--CH----HHhC--
Confidence 3468999999 9999999999988774 899999865444443444444321 1 12333332 2 22 2355
Q ss_pred CCCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCC-EEEEecc
Q 019795 81 KFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCK-KLVFSSS 132 (335)
Q Consensus 81 ~~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~-~~v~~Ss 132 (335)
+.|+||.+++.+... .+.-..+...|+.....+.+.+.+.... .++.+|.
T Consensus 76 ~aDvVii~ag~~~k~--g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tN 126 (326)
T 2zqz_A 76 DADLVVITAGAPQKP--GETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAAN 126 (326)
T ss_dssp GCSEEEECCCCC-------CHHHHHHHHHHHHHHHHHHHHHHTCCSEEEECSS
T ss_pred CCCEEEEcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCC
Confidence 789999999875322 2333467788999999999998887543 5555543
|
| >1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A* | Back alignment and structure |
|---|
Probab=97.19 E-value=0.0023 Score=56.38 Aligned_cols=116 Identities=13% Similarity=0.199 Sum_probs=72.9
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCC--eEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcC
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGF--KVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQ 80 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~ 80 (335)
++++|.|+|+ |.+|..++..|+..|. +|+++++++.........+.+... .....+.+.. | +. +.++
T Consensus 5 ~~~kI~IIGa-G~vG~sla~~l~~~~~~~ev~l~Di~~~~~~~~~~dl~~~~~-~~~~~~~i~~-~--~~----~al~-- 73 (316)
T 1ldn_A 5 GGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKV-FAPKPVDIWH-G--DY----DDCR-- 73 (316)
T ss_dssp TSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTT-SSSSCCEEEE-C--CG----GGTT--
T ss_pred CCCEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhhHHHHhh-hcCCCeEEEc-C--cH----HHhC--
Confidence 4578999999 9999999999988763 899999875433322333333221 1112333332 2 22 2355
Q ss_pred CCCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCC-EEEEec
Q 019795 81 KFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCK-KLVFSS 131 (335)
Q Consensus 81 ~~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~-~~v~~S 131 (335)
+.|+||-+++....... .-......|......+++.+.+.... .++.+|
T Consensus 74 ~aDvViia~~~~~~~g~--~r~dl~~~n~~i~~~i~~~i~~~~p~a~~iv~t 123 (316)
T 1ldn_A 74 DADLVVICAGANQKPGE--TRLDLVDKNIAIFRSIVESVMASGFQGLFLVAT 123 (316)
T ss_dssp TCSEEEECCSCCCCTTT--CSGGGHHHHHHHHHHHHHHHHHHTCCSEEEECS
T ss_pred CCCEEEEcCCCCCCCCC--CHHHHHHcChHHHHHHHHHHHHHCCCCEEEEeC
Confidence 78999999987543221 22355677888888888888876543 344443
|
| >1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D | Back alignment and structure |
|---|
Probab=97.18 E-value=0.00072 Score=59.12 Aligned_cols=74 Identities=15% Similarity=0.206 Sum_probs=51.1
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCC
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKF 82 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~ 82 (335)
.+++|+|+|++|.+|..+++.+...|++|+++++++.+..... .+ . .. ...|..+.+++.+.+. ++
T Consensus 125 ~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~~---g-------a~-~~~~~~~~~~~~~~~~--~~ 190 (302)
T 1iz0_A 125 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPL-AL---G-------AE-EAATYAEVPERAKAWG--GL 190 (302)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHH-HT---T-------CS-EEEEGGGHHHHHHHTT--SE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-hc---C-------CC-EEEECCcchhHHHHhc--Cc
Confidence 5689999999999999999999999999999998755443321 11 1 11 1235444133433343 79
Q ss_pred CEEEEcccc
Q 019795 83 EAVIHFGAL 91 (335)
Q Consensus 83 d~vi~~a~~ 91 (335)
|+||+ ++.
T Consensus 191 d~vid-~g~ 198 (302)
T 1iz0_A 191 DLVLE-VRG 198 (302)
T ss_dssp EEEEE-CSC
T ss_pred eEEEE-CCH
Confidence 99999 774
|
| >2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A* | Back alignment and structure |
|---|
Probab=97.18 E-value=0.00069 Score=60.91 Aligned_cols=76 Identities=16% Similarity=0.103 Sum_probs=49.8
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCH---HHHHHHHhc
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNK---DDLDKLFSS 79 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~---~~~~~~~~~ 79 (335)
.+++|||+||+|.+|..+++.+...|++|+++++++.+. +.+.+.. .. .. .|..+. +.+.++. .
T Consensus 163 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~----~~~~~~G-----a~-~~--~~~~~~~~~~~~~~~~-~ 229 (362)
T 2c0c_A 163 EGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKS----AFLKSLG-----CD-RP--INYKTEPVGTVLKQEY-P 229 (362)
T ss_dssp TTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHH----HHHHHTT-----CS-EE--EETTTSCHHHHHHHHC-T
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHH----HHHHHcC-----Cc-EE--EecCChhHHHHHHHhc-C
Confidence 467999999999999999999999999999998853322 2222211 11 12 233332 2233322 2
Q ss_pred CCCCEEEEcccc
Q 019795 80 QKFEAVIHFGAL 91 (335)
Q Consensus 80 ~~~d~vi~~a~~ 91 (335)
.++|+||++++.
T Consensus 230 ~g~D~vid~~g~ 241 (362)
T 2c0c_A 230 EGVDVVYESVGG 241 (362)
T ss_dssp TCEEEEEECSCT
T ss_pred CCCCEEEECCCH
Confidence 479999999874
|
| >1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1 | Back alignment and structure |
|---|
Probab=97.16 E-value=0.001 Score=57.96 Aligned_cols=36 Identities=31% Similarity=0.560 Sum_probs=30.9
Q ss_pred CCCe-EEEE-cCC-----------------ChhhHHHHHHHHhCCCeEEEEecCC
Q 019795 3 SEKN-ILVT-GGA-----------------GFIGTHCALQLLQGGFKVVLIDNLH 38 (335)
Q Consensus 3 ~~~~-vlIt-Gat-----------------G~iG~~l~~~L~~~g~~V~~~~r~~ 38 (335)
.+++ |||| |+| |-.|.+++++++++|++|+.+.+..
T Consensus 35 ~gk~~VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~Ga~V~lv~g~~ 89 (313)
T 1p9o_A 35 QGRRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYGVLFLYRAR 89 (313)
T ss_dssp TTCCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTCEEEEEEETT
T ss_pred cCCeEEEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCCCEEEEEecCC
Confidence 4566 9998 556 8899999999999999999998853
|
| >2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A* | Back alignment and structure |
|---|
Probab=97.15 E-value=0.0006 Score=61.68 Aligned_cols=76 Identities=14% Similarity=0.133 Sum_probs=54.4
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCC
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKF 82 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~ 82 (335)
.+++|+|+|+ |.||+.+++.+...|++|+++++++...... .+..+ ..+ ..+..+..++.+++. ++
T Consensus 167 ~g~~V~ViG~-G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~----~~~~g----~~~---~~~~~~~~~l~~~l~--~a 232 (377)
T 2vhw_A 167 EPADVVVIGA-GTAGYNAARIANGMGATVTVLDINIDKLRQL----DAEFC----GRI---HTRYSSAYELEGAVK--RA 232 (377)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHH----HHHTT----TSS---EEEECCHHHHHHHHH--HC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHH----HHhcC----Cee---EeccCCHHHHHHHHc--CC
Confidence 5789999998 9999999999999999999999864432222 21111 121 223345667778887 78
Q ss_pred CEEEEccccc
Q 019795 83 EAVIHFGALK 92 (335)
Q Consensus 83 d~vi~~a~~~ 92 (335)
|+||.+++.+
T Consensus 233 DvVi~~~~~p 242 (377)
T 2vhw_A 233 DLVIGAVLVP 242 (377)
T ss_dssp SEEEECCCCT
T ss_pred CEEEECCCcC
Confidence 9999988754
|
| >4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis} | Back alignment and structure |
|---|
Probab=97.15 E-value=0.0014 Score=56.14 Aligned_cols=96 Identities=20% Similarity=0.264 Sum_probs=56.5
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhC-CCeEEEE-ecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQG-GFKVVLI-DNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~-g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~ 79 (335)
|+|++|.|.|++|.+|+.+++.+.+. +++++++ +|+.+.... ..+....+ +.. ++.-.+++.++++
T Consensus 5 M~mikV~V~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~~~~~~G--~d~gel~g------~~~---gv~v~~dl~~ll~- 72 (272)
T 4f3y_A 5 MSSMKIAIAGASGRMGRMLIEAVLAAPDATLVGALDRTGSPQLG--QDAGAFLG------KQT---GVALTDDIERVCA- 72 (272)
T ss_dssp -CCEEEEESSTTSHHHHHHHHHHHHCTTEEEEEEBCCTTCTTTT--SBTTTTTT------CCC---SCBCBCCHHHHHH-
T ss_pred ccccEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEEecCccccc--ccHHHHhC------CCC---CceecCCHHHHhc-
Confidence 45789999999999999999999876 6777764 554332110 00111100 000 2222234566666
Q ss_pred CCCCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEE
Q 019795 80 QKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVF 129 (335)
Q Consensus 80 ~~~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~ 129 (335)
.+|+||.++.. ..+...++.|.+.|+ .+|.
T Consensus 73 -~~DVVIDfT~p------------------~a~~~~~~~al~~G~-~vVi 102 (272)
T 4f3y_A 73 -EADYLIDFTLP------------------EGTLVHLDAALRHDV-KLVI 102 (272)
T ss_dssp -HCSEEEECSCH------------------HHHHHHHHHHHHHTC-EEEE
T ss_pred -CCCEEEEcCCH------------------HHHHHHHHHHHHcCC-CEEE
Confidence 68999987532 123346777778875 5554
|
| >4dim_A Phosphoribosylglycinamide synthetase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ligase; 2.61A {Anaerococcus prevotii} | Back alignment and structure |
|---|
Probab=97.15 E-value=0.0014 Score=59.61 Aligned_cols=74 Identities=15% Similarity=0.163 Sum_probs=54.8
Q ss_pred CCCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcC
Q 019795 1 MASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQ 80 (335)
Q Consensus 1 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~ 80 (335)
||++|+|||+|+ |.++..+++.+.+.|+++++++........ . .+ .-+.+..|..|.+.+.++++..
T Consensus 4 m~~~~~ilI~g~-g~~~~~~~~a~~~~G~~~v~v~~~~~~~~~-~-~~----------ad~~~~~~~~d~~~l~~~~~~~ 70 (403)
T 4dim_A 4 MYDNKRLLILGA-GRGQLGLYKAAKELGIHTIAGTMPNAHKPC-L-NL----------ADEISYMDISNPDEVEQKVKDL 70 (403)
T ss_dssp --CCCEEEEECC-CGGGHHHHHHHHHHTCEEEEEECSSCCHHH-H-HH----------CSEEEECCTTCHHHHHHHTTTS
T ss_pred ccCCCEEEEECC-cHhHHHHHHHHHHCCCEEEEEcCCCCCCcc-h-hh----------CCeEEEecCCCHHHHHHHHHHc
Confidence 788899999998 567999999999999999999753212111 1 11 1135677888999999999888
Q ss_pred CCCEEEE
Q 019795 81 KFEAVIH 87 (335)
Q Consensus 81 ~~d~vi~ 87 (335)
++|.|+-
T Consensus 71 ~~d~v~~ 77 (403)
T 4dim_A 71 NLDGAAT 77 (403)
T ss_dssp CCSEEEC
T ss_pred CCCEEEe
Confidence 8998884
|
| >3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=97.12 E-value=0.00016 Score=55.91 Aligned_cols=71 Identities=20% Similarity=0.334 Sum_probs=48.8
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCCC
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKFE 83 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~d 83 (335)
+++|+|+|+ |.+|+.+++.|.+.|++|++.+|++.+.....+.+ ++... +. +++.+++. ++|
T Consensus 21 ~~~v~iiG~-G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~----------~~~~~--~~---~~~~~~~~--~~D 82 (144)
T 3oj0_A 21 GNKILLVGN-GMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKY----------EYEYV--LI---NDIDSLIK--NND 82 (144)
T ss_dssp CCEEEEECC-SHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHH----------TCEEE--EC---SCHHHHHH--TCS
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHh----------CCceE--ee---cCHHHHhc--CCC
Confidence 689999996 99999999999999999999998654433222211 11111 12 23455666 789
Q ss_pred EEEEccccc
Q 019795 84 AVIHFGALK 92 (335)
Q Consensus 84 ~vi~~a~~~ 92 (335)
+||.+.+..
T Consensus 83 ivi~at~~~ 91 (144)
T 3oj0_A 83 VIITATSSK 91 (144)
T ss_dssp EEEECSCCS
T ss_pred EEEEeCCCC
Confidence 999987654
|
| >4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=97.11 E-value=0.00054 Score=63.68 Aligned_cols=73 Identities=18% Similarity=0.280 Sum_probs=56.3
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCCC
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKFE 83 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~d 83 (335)
.|+|+|.|+ |-+|++|++.|.++|++|+++++++.. .+++... -.+..+.+|-++++-++++=- ...|
T Consensus 3 ~M~iiI~G~-G~vG~~la~~L~~~~~~v~vId~d~~~----~~~~~~~------~~~~~i~Gd~~~~~~L~~Agi-~~ad 70 (461)
T 4g65_A 3 AMKIIILGA-GQVGGTLAENLVGENNDITIVDKDGDR----LRELQDK------YDLRVVNGHASHPDVLHEAGA-QDAD 70 (461)
T ss_dssp CEEEEEECC-SHHHHHHHHHTCSTTEEEEEEESCHHH----HHHHHHH------SSCEEEESCTTCHHHHHHHTT-TTCS
T ss_pred cCEEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHH----HHHHHHh------cCcEEEEEcCCCHHHHHhcCC-CcCC
Confidence 478999998 999999999999999999999986443 3333221 257789999999998887622 3789
Q ss_pred EEEEc
Q 019795 84 AVIHF 88 (335)
Q Consensus 84 ~vi~~ 88 (335)
.+|-+
T Consensus 71 ~~ia~ 75 (461)
T 4g65_A 71 MLVAV 75 (461)
T ss_dssp EEEEC
T ss_pred EEEEE
Confidence 88854
|
| >1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A* | Back alignment and structure |
|---|
Probab=97.07 E-value=0.0012 Score=59.37 Aligned_cols=75 Identities=19% Similarity=0.198 Sum_probs=54.0
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCC
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKF 82 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~ 82 (335)
.+.+|||+|+ |.||..+++.+...|++|+++++++.+.....+.+ + .. ...|..+.+.+.++.. ++
T Consensus 187 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~l----G------a~-~v~~~~~~~~~~~~~~--~~ 252 (366)
T 1yqd_A 187 PGKHIGIVGL-GGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNF----G------AD-SFLVSRDQEQMQAAAG--TL 252 (366)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTS----C------CS-EEEETTCHHHHHHTTT--CE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc----C------Cc-eEEeccCHHHHHHhhC--CC
Confidence 5689999996 99999999999999999999998654433222111 1 11 2246666666776654 79
Q ss_pred CEEEEcccc
Q 019795 83 EAVIHFGAL 91 (335)
Q Consensus 83 d~vi~~a~~ 91 (335)
|+||++++.
T Consensus 253 D~vid~~g~ 261 (366)
T 1yqd_A 253 DGIIDTVSA 261 (366)
T ss_dssp EEEEECCSS
T ss_pred CEEEECCCc
Confidence 999999885
|
| >2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum} | Back alignment and structure |
|---|
Probab=97.07 E-value=0.00092 Score=59.19 Aligned_cols=116 Identities=16% Similarity=0.133 Sum_probs=71.1
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCCchhhHHhhhhhcCCc-cccceeEEEccCCCHHHHHHHHhcCC
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQGGF-KVVLIDNLHNSVPEAVDRVKDLAGPE-LAKKLEFHVGDLRNKDDLDKLFSSQK 81 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~Dl~d~~~~~~~~~~~~ 81 (335)
+++|.|+|| |.+|..++..|+..|+ +|+++++++.........+.+..... ...++... .| + +.++ +
T Consensus 14 ~~kI~ViGa-G~vG~~iA~~la~~g~~~V~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t-~d------~-~al~--~ 82 (328)
T 2hjr_A 14 RKKISIIGA-GQIGSTIALLLGQKDLGDVYMFDIIEGVPQGKALDLNHCMALIGSPAKIFGE-NN------Y-EYLQ--N 82 (328)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEE-SC------G-GGGT--T
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhHhhccCCCCEEEEC-CC------H-HHHC--C
Confidence 368999998 9999999999999998 99999997655443232332221100 01122211 22 2 2455 7
Q ss_pred CCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCC-EEEEecc
Q 019795 82 FEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCK-KLVFSSS 132 (335)
Q Consensus 82 ~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~-~~v~~Ss 132 (335)
.|+||-+++.+.... . .-..+...|+.....+++.+.+.... .++.+|.
T Consensus 83 aD~VI~avg~p~k~g-~-tr~dl~~~n~~i~~~i~~~i~~~~p~a~viv~tN 132 (328)
T 2hjr_A 83 SDVVIITAGVPRKPN-M-TRSDLLTVNAKIVGSVAENVGKYCPNAFVICITN 132 (328)
T ss_dssp CSEEEECCSCCCCTT-C-CSGGGHHHHHHHHHHHHHHHHHHCTTCEEEECCS
T ss_pred CCEEEEcCCCCCCCC-C-chhhHHhhhHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 899999987643111 1 11235566888888888888776443 4444443
|
| >4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A | Back alignment and structure |
|---|
Probab=97.05 E-value=0.0016 Score=59.74 Aligned_cols=70 Identities=21% Similarity=0.228 Sum_probs=54.4
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCC
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQK 81 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~ 81 (335)
+++|+|+|+|+ |.+|+.+++.+.+.|++|++++..+...... +. -..+..|..|.+.+.+++. +
T Consensus 33 ~~~~~IlIlG~-G~lg~~~~~aa~~lG~~v~v~d~~~~~p~~~---~a----------d~~~~~~~~d~~~l~~~a~--~ 96 (419)
T 4e4t_A 33 LPGAWLGMVGG-GQLGRMFCFAAQSMGYRVAVLDPDPASPAGA---VA----------DRHLRAAYDDEAALAELAG--L 96 (419)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCTTCHHHH---HS----------SEEECCCTTCHHHHHHHHH--H
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEECCCCcCchhh---hC----------CEEEECCcCCHHHHHHHHh--c
Confidence 35689999997 8999999999999999999998654433211 11 1356688999999999997 7
Q ss_pred CCEEEE
Q 019795 82 FEAVIH 87 (335)
Q Consensus 82 ~d~vi~ 87 (335)
+|+|+.
T Consensus 97 ~D~V~~ 102 (419)
T 4e4t_A 97 CEAVST 102 (419)
T ss_dssp CSEEEE
T ss_pred CCEEEE
Confidence 899883
|
| >3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans} | Back alignment and structure |
|---|
Probab=97.04 E-value=0.00097 Score=59.45 Aligned_cols=76 Identities=21% Similarity=0.231 Sum_probs=50.3
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCC-HHHHHHHHhcCC
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRN-KDDLDKLFSSQK 81 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d-~~~~~~~~~~~~ 81 (335)
.+++|||+||+|.+|..+++.+...|++|+++ +++.+ .+.+.++. ...+. +-.+ .+.+.++....+
T Consensus 150 ~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~----~~~~~~lG-------a~~i~-~~~~~~~~~~~~~~~~g 216 (343)
T 3gaz_A 150 DGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSD----LEYVRDLG-------ATPID-ASREPEDYAAEHTAGQG 216 (343)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHH----HHHHHHHT-------SEEEE-TTSCHHHHHHHHHTTSC
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHH----HHHHHHcC-------CCEec-cCCCHHHHHHHHhcCCC
Confidence 46789999999999999999999999999988 54332 22222221 12222 2122 234445554457
Q ss_pred CCEEEEcccc
Q 019795 82 FEAVIHFGAL 91 (335)
Q Consensus 82 ~d~vi~~a~~ 91 (335)
+|+||++++.
T Consensus 217 ~D~vid~~g~ 226 (343)
T 3gaz_A 217 FDLVYDTLGG 226 (343)
T ss_dssp EEEEEESSCT
T ss_pred ceEEEECCCc
Confidence 9999998874
|
| >2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A* | Back alignment and structure |
|---|
Probab=97.04 E-value=0.00085 Score=60.41 Aligned_cols=74 Identities=20% Similarity=0.301 Sum_probs=49.7
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCC--HHHHHHHHhcCC
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRN--KDDLDKLFSSQK 81 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d--~~~~~~~~~~~~ 81 (335)
+++|||+|+ |.+|..+++.+...|++|+++++++. ..+..+.+.+. +...+ | .+ .+.+.+ .. .+
T Consensus 181 g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~-~~~~~~~~~~~-------ga~~v--~-~~~~~~~~~~-~~-~~ 246 (366)
T 2cdc_A 181 CRKVLVVGT-GPIGVLFTLLFRTYGLEVWMANRREP-TEVEQTVIEET-------KTNYY--N-SSNGYDKLKD-SV-GK 246 (366)
T ss_dssp TCEEEEESC-HHHHHHHHHHHHHHTCEEEEEESSCC-CHHHHHHHHHH-------TCEEE--E-CTTCSHHHHH-HH-CC
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCcc-chHHHHHHHHh-------CCcee--c-hHHHHHHHHH-hC-CC
Confidence 789999999 99999999999989999999998752 00111222221 12233 4 33 233444 33 47
Q ss_pred CCEEEEcccc
Q 019795 82 FEAVIHFGAL 91 (335)
Q Consensus 82 ~d~vi~~a~~ 91 (335)
+|+||++++.
T Consensus 247 ~d~vid~~g~ 256 (366)
T 2cdc_A 247 FDVIIDATGA 256 (366)
T ss_dssp EEEEEECCCC
T ss_pred CCEEEECCCC
Confidence 9999999886
|
| >3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus} | Back alignment and structure |
|---|
Probab=97.03 E-value=0.0011 Score=59.29 Aligned_cols=76 Identities=13% Similarity=0.207 Sum_probs=50.6
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCC--HHHHHHHHhcC
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRN--KDDLDKLFSSQ 80 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d--~~~~~~~~~~~ 80 (335)
.+.+|||+||+|.+|..+++.+...|++|+++++++.+. +.+.++.. . ..+ |..+ .+.+.++ ...
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~----~~~~~lGa----~--~vi--~~~~~~~~~~~~~-~~~ 216 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETI----EWTKKMGA----D--IVL--NHKESLLNQFKTQ-GIE 216 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHH----HHHHHHTC----S--EEE--CTTSCHHHHHHHH-TCC
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHH----HHHHhcCC----c--EEE--ECCccHHHHHHHh-CCC
Confidence 578999999999999999999999999999998754332 22222211 1 112 2222 2334444 334
Q ss_pred CCCEEEEcccc
Q 019795 81 KFEAVIHFGAL 91 (335)
Q Consensus 81 ~~d~vi~~a~~ 91 (335)
++|+||++++.
T Consensus 217 g~Dvv~d~~g~ 227 (346)
T 3fbg_A 217 LVDYVFCTFNT 227 (346)
T ss_dssp CEEEEEESSCH
T ss_pred CccEEEECCCc
Confidence 79999998774
|
| >1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A* | Back alignment and structure |
|---|
Probab=97.02 E-value=0.00056 Score=58.95 Aligned_cols=74 Identities=20% Similarity=0.310 Sum_probs=49.5
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCC
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKF 82 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~ 82 (335)
++|+++|+|+ |.+|+.++..|++.|++|++.+|+..+.....+.+... ..+.. .|+ +++ .+ ..+
T Consensus 118 ~~~~vlvlGa-Gg~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~~~~~~~------~~~~~--~~~---~~~---~~-~~~ 181 (272)
T 1p77_A 118 PNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPY------GNIQA--VSM---DSI---PL-QTY 181 (272)
T ss_dssp TTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGG------SCEEE--EEG---GGC---CC-SCC
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcccc------CCeEE--eeH---HHh---cc-CCC
Confidence 5789999998 88999999999999999999999755444333332210 12222 232 111 11 278
Q ss_pred CEEEEccccc
Q 019795 83 EAVIHFGALK 92 (335)
Q Consensus 83 d~vi~~a~~~ 92 (335)
|+||++++..
T Consensus 182 DivIn~t~~~ 191 (272)
T 1p77_A 182 DLVINATSAG 191 (272)
T ss_dssp SEEEECCCC-
T ss_pred CEEEECCCCC
Confidence 9999998874
|
| >2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=97.00 E-value=0.0024 Score=58.72 Aligned_cols=94 Identities=12% Similarity=0.233 Sum_probs=61.5
Q ss_pred CeEEEEcCCChhhHHHHHHHHhC-CC---eEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCC--CH-HHHHHHH
Q 019795 5 KNILVTGGAGFIGTHCALQLLQG-GF---KVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLR--NK-DDLDKLF 77 (335)
Q Consensus 5 ~~vlItGatG~iG~~l~~~L~~~-g~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~--d~-~~~~~~~ 77 (335)
++|+|.|+ |.||+.+++.|+++ ++ +|++++...... +..+. .++.+...+++ |. +.+.+++
T Consensus 14 ~rVlIIGa-GgVG~~va~lla~~~dv~~~~I~vaD~~~~~~-~~~~~----------~g~~~~~~~Vdadnv~~~l~aLl 81 (480)
T 2ph5_A 14 NRFVILGF-GCVGQALMPLIFEKFDIKPSQVTIIAAEGTKV-DVAQQ----------YGVSFKLQQITPQNYLEVIGSTL 81 (480)
T ss_dssp SCEEEECC-SHHHHHHHHHHHHHBCCCGGGEEEEESSCCSC-CHHHH----------HTCEEEECCCCTTTHHHHTGGGC
T ss_pred CCEEEECc-CHHHHHHHHHHHhCCCCceeEEEEeccchhhh-hHHhh----------cCCceeEEeccchhHHHHHHHHh
Confidence 67999995 99999999999986 45 688887655432 21111 13455555554 44 3356677
Q ss_pred hcCCCCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccc
Q 019795 78 SSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSA 133 (335)
Q Consensus 78 ~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~ 133 (335)
++ .|+|||++-... ...++++|.+.|+ -|++++
T Consensus 82 ~~--~DvVIN~s~~~~------------------~l~Im~acleaGv---~YlDTa 114 (480)
T 2ph5_A 82 EE--NDFLIDVSIGIS------------------SLALIILCNQKGA---LYINAA 114 (480)
T ss_dssp CT--TCEEEECCSSSC------------------HHHHHHHHHHHTC---EEEESS
T ss_pred cC--CCEEEECCcccc------------------CHHHHHHHHHcCC---CEEECC
Confidence 73 499998654321 2358999999985 344554
|
| >1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6 | Back alignment and structure |
|---|
Probab=96.99 E-value=0.00087 Score=60.00 Aligned_cols=38 Identities=29% Similarity=0.155 Sum_probs=32.0
Q ss_pred CCCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCC
Q 019795 1 MASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHN 39 (335)
Q Consensus 1 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 39 (335)
||++|+|.|.|+ |.+|+.++..|.+.|++|++++|++.
T Consensus 1 mm~~mki~iiG~-G~~G~~~a~~L~~~g~~V~~~~r~~~ 38 (359)
T 1bg6_A 1 MIESKTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQ 38 (359)
T ss_dssp ---CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CCCcCeEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHH
Confidence 777889999997 99999999999999999999988644
|
| >2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.98 E-value=0.0023 Score=57.78 Aligned_cols=76 Identities=18% Similarity=0.249 Sum_probs=49.9
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCC
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKF 82 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~ 82 (335)
.+++|||+||+|.+|..+++.+...|++|+++++ +.+ .+.+.+.. .. ...|..+.+..+++.+..++
T Consensus 183 ~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~~-~~~----~~~~~~lG-------a~-~v~~~~~~~~~~~~~~~~g~ 249 (375)
T 2vn8_A 183 TGKRVLILGASGGVGTFAIQVMKAWDAHVTAVCS-QDA----SELVRKLG-------AD-DVIDYKSGSVEEQLKSLKPF 249 (375)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC-GGG----HHHHHHTT-------CS-EEEETTSSCHHHHHHTSCCB
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEeC-hHH----HHHHHHcC-------CC-EEEECCchHHHHHHhhcCCC
Confidence 4678999999999999999999999999988873 222 12222221 11 12244443333334333479
Q ss_pred CEEEEcccc
Q 019795 83 EAVIHFGAL 91 (335)
Q Consensus 83 d~vi~~a~~ 91 (335)
|+||++++.
T Consensus 250 D~vid~~g~ 258 (375)
T 2vn8_A 250 DFILDNVGG 258 (375)
T ss_dssp SEEEESSCT
T ss_pred CEEEECCCC
Confidence 999999885
|
| >3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A* | Back alignment and structure |
|---|
Probab=96.98 E-value=0.0032 Score=55.56 Aligned_cols=83 Identities=17% Similarity=0.203 Sum_probs=53.1
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCC-------------------CchhhHHhhhhhcCCccccceeE
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGF-KVVLIDNLHN-------------------SVPEAVDRVKDLAGPELAKKLEF 62 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~-------------------~~~~~~~~~~~~~~~~~~~~i~~ 62 (335)
++++|+|.|+ |.+|+++++.|+..|. +++++++..- +...+.+++.++.+ .-.+..
T Consensus 33 ~~~~VlIvGa-GGlGs~va~~La~aGVg~ItlvD~D~Ve~SNL~RQ~l~~~~diG~~Ka~aaa~~L~~inP---~v~v~~ 108 (340)
T 3rui_A 33 KNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFP---LMDATG 108 (340)
T ss_dssp HTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCBCCTTSTTTSTTCCGGGTTSBHHHHHHHHHHHHCT---TCEEEE
T ss_pred hCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEecCCEeccccccccccCChhhcChHHHHHHHHHHHHhCC---CCEEEE
Confidence 4679999998 9999999999999995 5777776531 22233333433321 123444
Q ss_pred EEccCC--------------CHHHHHHHHhcCCCCEEEEcccc
Q 019795 63 HVGDLR--------------NKDDLDKLFSSQKFEAVIHFGAL 91 (335)
Q Consensus 63 ~~~Dl~--------------d~~~~~~~~~~~~~d~vi~~a~~ 91 (335)
+..++. +.+.+.++++ ++|+||.+...
T Consensus 109 ~~~~i~~~g~~~~~~~~~~~~~~~l~~~l~--~~DlVvd~tDn 149 (340)
T 3rui_A 109 VKLSIPMIGHKLVNEEAQHKDFDRLRALIK--EHDIIFLLVDS 149 (340)
T ss_dssp ECCCCCCTTSCCSCHHHHHHHHHHHHHHHH--HCSEEEECCSS
T ss_pred EeccccccCcccchhhhhcCCHHHHHhhhc--cCCEEEecCCC
Confidence 444331 2345667787 78999987554
|
| >2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A* | Back alignment and structure |
|---|
Probab=96.97 E-value=0.00036 Score=66.02 Aligned_cols=37 Identities=27% Similarity=0.357 Sum_probs=29.8
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCC
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNS 40 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~ 40 (335)
++|+++|||| |++|++++..|++.|++|++++|+..+
T Consensus 363 ~~k~vlV~Ga-GGig~aia~~L~~~G~~V~i~~R~~~~ 399 (523)
T 2o7s_A 363 ASKTVVVIGA-GGAGKALAYGAKEKGAKVVIANRTYER 399 (523)
T ss_dssp ---CEEEECC-SHHHHHHHHHHHHHCC-CEEEESSHHH
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHH
Confidence 4678999999 799999999999999999999986543
|
| >1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1 | Back alignment and structure |
|---|
Probab=96.95 E-value=0.0046 Score=54.22 Aligned_cols=114 Identities=18% Similarity=0.143 Sum_probs=68.4
Q ss_pred CeEEEEcCCChhhHHHHHHHHhCC--CeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCC
Q 019795 5 KNILVTGGAGFIGTHCALQLLQGG--FKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKF 82 (335)
Q Consensus 5 ~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~ 82 (335)
|+|.|+| +|.+|..++..|++.| ++|+++++++.........+.+... ..+..+.....| . +.++ ..
T Consensus 2 ~kI~VIG-aG~~G~~la~~L~~~g~~~~V~l~d~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~d---~----~~~~--~a 70 (309)
T 1hyh_A 2 RKIGIIG-LGNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMA-NLEAHGNIVIND---W----AALA--DA 70 (309)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGG-GSSSCCEEEESC---G----GGGT--TC
T ss_pred CEEEEEC-CCHHHHHHHHHHHhCCCCCEEEEEcCCHHHHHHHHHHHHhhhh-hcCCCeEEEeCC---H----HHhC--CC
Confidence 6899999 5999999999999999 7999999865443333222221110 001123332222 2 2344 78
Q ss_pred CEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHHHHcCCC-EEEEec
Q 019795 83 EAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAMAKYNCK-KLVFSS 131 (335)
Q Consensus 83 d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~-~~v~~S 131 (335)
|+||-+++.... .. ..-..+...|+.....+++.+.+...+ .++.+|
T Consensus 71 DvViiav~~~~~~~~~~g--~~r~~l~~~n~~i~~~i~~~i~~~~~~~~ii~~t 122 (309)
T 1hyh_A 71 DVVISTLGNIKLQQDNPT--GDRFAELKFTSSMVQSVGTNLKESGFHGVLVVIS 122 (309)
T ss_dssp SEEEECCSCGGGTC---------CTTHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred CEEEEecCCcccCCCCCC--CCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEEc
Confidence 999998876432 11 111245667888888888888776433 444443
|
| >3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A* | Back alignment and structure |
|---|
Probab=96.94 E-value=0.0011 Score=57.17 Aligned_cols=69 Identities=13% Similarity=0.133 Sum_probs=49.0
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCC
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGF-KVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQK 81 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~ 81 (335)
++|+++|+|+ |.+|+.++..|.+.|+ +|++++|+..+..... ..+..+ ..+++.+++. .
T Consensus 116 ~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la------------~~~~~~-----~~~~~~~~~~--~ 175 (277)
T 3don_A 116 EDAYILILGA-GGASKGIANELYKIVRPTLTVANRTMSRFNNWS------------LNINKI-----NLSHAESHLD--E 175 (277)
T ss_dssp GGCCEEEECC-SHHHHHHHHHHHTTCCSCCEEECSCGGGGTTCC------------SCCEEE-----CHHHHHHTGG--G
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHH------------Hhcccc-----cHhhHHHHhc--C
Confidence 4689999997 8999999999999998 8999998755432221 112221 2345666666 6
Q ss_pred CCEEEEcccc
Q 019795 82 FEAVIHFGAL 91 (335)
Q Consensus 82 ~d~vi~~a~~ 91 (335)
+|+||++...
T Consensus 176 aDiVInaTp~ 185 (277)
T 3don_A 176 FDIIINTTPA 185 (277)
T ss_dssp CSEEEECCC-
T ss_pred CCEEEECccC
Confidence 8999997654
|
| >7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A* | Back alignment and structure |
|---|
Probab=96.91 E-value=0.011 Score=52.79 Aligned_cols=120 Identities=18% Similarity=0.143 Sum_probs=74.3
Q ss_pred CCCCCeEEEEcCCChhhHHHHHHHHhCCC-----eEEEEecCCCCc----hhhHHhhhhhcCCccccceeEEEccCCCHH
Q 019795 1 MASEKNILVTGGAGFIGTHCALQLLQGGF-----KVVLIDNLHNSV----PEAVDRVKDLAGPELAKKLEFHVGDLRNKD 71 (335)
Q Consensus 1 ~~~~~~vlItGatG~iG~~l~~~L~~~g~-----~V~~~~r~~~~~----~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~ 71 (335)
|...++|.|+||+|.||++++-.|+..+. .+.+++...... ....-.+.+...+.. ..+.. .+ +
T Consensus 29 ~~~~~KV~ViGAaG~VG~~la~~l~~~~l~~e~~~l~L~d~d~~~~~~~~~G~amDL~h~~~p~~-~~v~i-----~~-~ 101 (375)
T 7mdh_A 29 WKKLVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLL-REVSI-----GI-D 101 (375)
T ss_dssp CCCCEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTE-EEEEE-----ES-C
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHcCCcCCCCceeEEEecCccchhhhhHHHHHhHHhhhhhhc-CCcEE-----ec-C
Confidence 34557899999999999999999998753 266655443332 222223333221110 11221 11 1
Q ss_pred HHHHHHhcCCCCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHc-CC-CEEEEecc
Q 019795 72 DLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKY-NC-KKLVFSSS 132 (335)
Q Consensus 72 ~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~-~~-~~~v~~Ss 132 (335)
-.+.++ +.|+||-+||.+.- ..+.-..+++.|+.....+.+++.+. +. ..++.+|.
T Consensus 102 -~y~~~~--daDvVVitag~prk--pG~tR~DLl~~N~~I~k~i~~~i~~~a~p~~ivlVvsN 159 (375)
T 7mdh_A 102 -PYEVFE--DVDWALLIGAKPRG--PGMERAALLDINGQIFADQGKALNAVASKNVKVLVVGN 159 (375)
T ss_dssp -HHHHTT--TCSEEEECCCCCCC--TTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred -CHHHhC--CCCEEEEcCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecC
Confidence 133455 78999999987532 23445578999999999999998875 43 35666664
|
| >3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A | Back alignment and structure |
|---|
Probab=96.89 E-value=0.0025 Score=56.95 Aligned_cols=106 Identities=14% Similarity=0.138 Sum_probs=67.6
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCC-------------------chhhHHhhhhhcCCccccceeE
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGF-KVVLIDNLHNS-------------------VPEAVDRVKDLAGPELAKKLEF 62 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~-------------------~~~~~~~~~~~~~~~~~~~i~~ 62 (335)
+.++|+|.|+ |.+|+++++.|+..|. ++++++++.-. ...+.+++.++-+ .-.+..
T Consensus 117 ~~~~VlvvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np---~v~v~~ 192 (353)
T 3h5n_A 117 KNAKVVILGC-GGIGNHVSVILATSGIGEIILIDNDQIENTNLTRQVLFSEDDVGKNKTEVIKRELLKRNS---EISVSE 192 (353)
T ss_dssp HTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCT---TSEEEE
T ss_pred hCCeEEEECC-CHHHHHHHHHHHhCCCCeEEEECCCcCcccccccccCCChHHCCChHHHHHHHHHHHHCC---CCeEEE
Confidence 4678999998 8999999999999984 68888875422 2223333333221 135667
Q ss_pred EEccCCCHHHHHHHHhcCCCCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEecc
Q 019795 63 HVGDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSS 132 (335)
Q Consensus 63 ~~~Dl~d~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss 132 (335)
+..++.+..++.+ ++ ++|+||.+..... . .-..+-++|.+.+. .+|+.+.
T Consensus 193 ~~~~i~~~~~~~~-~~--~~DlVvd~~Dn~~---------~-------~r~~ln~~c~~~~~-p~i~~~~ 242 (353)
T 3h5n_A 193 IALNINDYTDLHK-VP--EADIWVVSADHPF---------N-------LINWVNKYCVRANQ-PYINAGY 242 (353)
T ss_dssp EECCCCSGGGGGG-SC--CCSEEEECCCCST---------T-------HHHHHHHHHHHTTC-CEEEEEE
T ss_pred eecccCchhhhhH-hc--cCCEEEEecCChH---------H-------HHHHHHHHHHHhCC-CEEEEEE
Confidence 7777776654555 65 7899998653311 0 11235567777774 5666554
|
| >2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A | Back alignment and structure |
|---|
Probab=96.86 E-value=0.012 Score=51.28 Aligned_cols=111 Identities=23% Similarity=0.274 Sum_probs=71.4
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCC--eEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcC
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGF--KVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQ 80 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~ 80 (335)
.+++|.|+|| |.+|..++..|+..|. +|+++++++. .......+.+... +.+.. ..| + +.++
T Consensus 13 ~~~kV~ViGa-G~vG~~~a~~l~~~g~~~ev~L~Di~~~-~~g~a~dl~~~~~----~~i~~-t~d------~-~~l~-- 76 (303)
T 2i6t_A 13 TVNKITVVGG-GELGIACTLAISAKGIADRLVLLDLSEG-TKGATMDLEIFNL----PNVEI-SKD------L-SASA-- 76 (303)
T ss_dssp -CCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECCC------CHHHHHHHTC----TTEEE-ESC------G-GGGT--
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEcCCcc-hHHHHHHHhhhcC----CCeEE-eCC------H-HHHC--
Confidence 3578999997 9999999999999998 9999999765 3322333333221 23433 223 2 2355
Q ss_pred CCCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCC-EEEEecc
Q 019795 81 KFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCK-KLVFSSS 132 (335)
Q Consensus 81 ~~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~-~~v~~Ss 132 (335)
+.|+||-+++... ..+.-..+...|+.....+++.+.+.... .++.+|.
T Consensus 77 ~aD~Vi~aag~~~---pG~tR~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~sN 126 (303)
T 2i6t_A 77 HSKVVIFTVNSLG---SSQSYLDVVQSNVDMFRALVPALGHYSQHSVLLVASQ 126 (303)
T ss_dssp TCSEEEECCCC-------CCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEECSS
T ss_pred CCCEEEEcCCCCC---CCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcCC
Confidence 7899999998842 22344567778988888999998876543 4445554
|
| >1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A* | Back alignment and structure |
|---|
Probab=96.86 E-value=0.0081 Score=52.65 Aligned_cols=115 Identities=14% Similarity=0.063 Sum_probs=70.5
Q ss_pred CeEEEEcCCChhhHHHHHHHHhC--CCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCC
Q 019795 5 KNILVTGGAGFIGTHCALQLLQG--GFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKF 82 (335)
Q Consensus 5 ~~vlItGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~ 82 (335)
|+|.|+|+ |.+|..++..|+.. |++|+++++++.........+.+... .......+... +|. .+ ++ +.
T Consensus 1 mkI~VIGa-G~vG~~la~~la~~~~g~~V~l~D~~~~~~~~~~~~l~~~~~-~~~~~~~i~~t--~d~---~~-l~--~a 70 (310)
T 1guz_A 1 MKITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGP-VGLFDTKVTGS--NDY---AD-TA--NS 70 (310)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHH-HHTCCCEEEEE--SCG---GG-GT--TC
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHhHHhhhh-cccCCcEEEEC--CCH---HH-HC--CC
Confidence 48999998 99999999999985 79999999976544432222221100 00011111110 222 22 44 78
Q ss_pred CEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCC-EEEEec
Q 019795 83 EAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCK-KLVFSS 131 (335)
Q Consensus 83 d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~-~~v~~S 131 (335)
|+||-+++.+... ...-..++..|+.....+++.+.+.... .++.+|
T Consensus 71 DvViiav~~p~~~--g~~r~dl~~~n~~i~~~i~~~i~~~~~~~~viv~t 118 (310)
T 1guz_A 71 DIVIITAGLPRKP--GMTREDLLMKNAGIVKEVTDNIMKHSKNPIIIVVS 118 (310)
T ss_dssp SEEEECCSCCCCT--TCCHHHHHHHHHHHHHHHHHHHHHHCSSCEEEECC
T ss_pred CEEEEeCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEc
Confidence 9999988764221 1223366778888888899888777533 455554
|
| >3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A* | Back alignment and structure |
|---|
Probab=96.85 E-value=0.0058 Score=55.34 Aligned_cols=69 Identities=25% Similarity=0.280 Sum_probs=53.1
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCC
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQK 81 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~ 81 (335)
+.+|+|+|+|+ |.+|+.+++.+.+.|++|++++.++....... .-..+..|..|.+.+.++++ .
T Consensus 12 ~~~k~IlIlG~-G~~g~~la~aa~~~G~~vi~~d~~~~~~~~~~-------------ad~~~~~~~~d~~~l~~~~~--~ 75 (389)
T 3q2o_A 12 LPGKTIGIIGG-GQLGRMMALAAKEMGYKIAVLDPTKNSPCAQV-------------ADIEIVASYDDLKAIQHLAE--I 75 (389)
T ss_dssp CTTSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSTTCTTTTT-------------CSEEEECCTTCHHHHHHHHH--T
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCCCCchHHh-------------CCceEecCcCCHHHHHHHHH--h
Confidence 46789999997 88999999999999999999987654321110 11345678899999999998 6
Q ss_pred CCEEE
Q 019795 82 FEAVI 86 (335)
Q Consensus 82 ~d~vi 86 (335)
+|+|.
T Consensus 76 ~dvI~ 80 (389)
T 3q2o_A 76 SDVVT 80 (389)
T ss_dssp CSEEE
T ss_pred CCEee
Confidence 78874
|
| >4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=96.84 E-value=0.0075 Score=55.93 Aligned_cols=99 Identities=18% Similarity=0.314 Sum_probs=69.3
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHH-HhcCCC
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKL-FSSQKF 82 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~-~~~~~~ 82 (335)
.++|+|.|| |-+|.+|++.| +++++|.++.+++.......+.+ ++..++.+|-+|.+-+.+. ++ ..
T Consensus 235 ~~~v~I~Gg-G~ig~~lA~~L-~~~~~v~iIE~d~~r~~~la~~l---------~~~~Vi~GD~td~~~L~ee~i~--~~ 301 (461)
T 4g65_A 235 YRRIMIVGG-GNIGASLAKRL-EQTYSVKLIERNLQRAEKLSEEL---------ENTIVFCGDAADQELLTEENID--QV 301 (461)
T ss_dssp CCEEEEECC-SHHHHHHHHHH-TTTSEEEEEESCHHHHHHHHHHC---------TTSEEEESCTTCHHHHHHTTGG--GC
T ss_pred ccEEEEEcc-hHHHHHHHHHh-hhcCceEEEecCHHHHHHHHHHC---------CCceEEeccccchhhHhhcCch--hh
Confidence 478999997 99999999998 45699999987655544444333 4678999999999876653 33 67
Q ss_pred CEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEecc
Q 019795 83 EAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSS 132 (335)
Q Consensus 83 d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss 132 (335)
|+++-+.+.. +.|+. .+..|++.|+++.|-.-.
T Consensus 302 D~~ia~T~~D-------------e~Ni~----~~llAk~~gv~kvIa~vn 334 (461)
T 4g65_A 302 DVFIALTNED-------------ETNIM----SAMLAKRMGAKKVMVLIQ 334 (461)
T ss_dssp SEEEECCSCH-------------HHHHH----HHHHHHHTTCSEEEEECS
T ss_pred cEEEEcccCc-------------HHHHH----HHHHHHHcCCcccccccc
Confidence 9999653331 12554 334467789888775443
|
| >2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A | Back alignment and structure |
|---|
Probab=96.84 E-value=0.0067 Score=53.17 Aligned_cols=114 Identities=13% Similarity=0.117 Sum_probs=75.2
Q ss_pred CeEEEEcCCChhhHHHHHHHHhCC--CeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCC
Q 019795 5 KNILVTGGAGFIGTHCALQLLQGG--FKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKF 82 (335)
Q Consensus 5 ~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~ 82 (335)
++|.|+|+ |.+|..++..|+..+ .+++++++++.+.......+.+... .. ..+.+.. + +. +.++ +.
T Consensus 1 ~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~k~~g~a~dl~~~~~-~~-~~~~v~~-~--~~----~a~~--~a 68 (310)
T 2xxj_A 1 MKVGIVGS-GMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHATP-FA-HPVWVWA-G--SY----GDLE--GA 68 (310)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHTTGG-GS-CCCEEEE-C--CG----GGGT--TE
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHHhHh-hc-CCeEEEE-C--CH----HHhC--CC
Confidence 58999998 999999999999886 6899999865444433344443221 01 2333332 2 22 2355 78
Q ss_pred CEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCC-EEEEecc
Q 019795 83 EAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCK-KLVFSSS 132 (335)
Q Consensus 83 d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~-~~v~~Ss 132 (335)
|+||.+++.+... ...-..+...|+.....+.+.+.+.+.+ .++.+|.
T Consensus 69 D~Vii~ag~~~~~--g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tN 117 (310)
T 2xxj_A 69 RAVVLAAGVAQRP--GETRLQLLDRNAQVFAQVVPRVLEAAPEAVLLVATN 117 (310)
T ss_dssp EEEEECCCCCCCT--TCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSS
T ss_pred CEEEECCCCCCCC--CcCHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEecC
Confidence 9999999875322 2233466788999999999998887543 5555543
|
| >1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=96.83 E-value=0.002 Score=56.97 Aligned_cols=73 Identities=19% Similarity=0.211 Sum_probs=47.0
Q ss_pred eEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCH--HHHHHHHhcCCCC
Q 019795 6 NILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNK--DDLDKLFSSQKFE 83 (335)
Q Consensus 6 ~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~--~~~~~~~~~~~~d 83 (335)
+|||+|++|.+|..+++.+...|++|+++++++.+.+.. ..+ . .. .. .|..+. +.+.++ ...++|
T Consensus 152 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~-~~l---G-----a~-~~--i~~~~~~~~~~~~~-~~~~~d 218 (328)
T 1xa0_A 152 PVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYL-RVL---G-----AK-EV--LAREDVMAERIRPL-DKQRWA 218 (328)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHH-HHT---T-----CS-EE--EECC---------C-CSCCEE
T ss_pred eEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHH-HHc---C-----Cc-EE--EecCCcHHHHHHHh-cCCccc
Confidence 799999999999999999999999999999876554332 222 1 11 11 233332 122222 234799
Q ss_pred EEEEcccc
Q 019795 84 AVIHFGAL 91 (335)
Q Consensus 84 ~vi~~a~~ 91 (335)
+||++++.
T Consensus 219 ~vid~~g~ 226 (328)
T 1xa0_A 219 AAVDPVGG 226 (328)
T ss_dssp EEEECSTT
T ss_pred EEEECCcH
Confidence 99998874
|
| >3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B* | Back alignment and structure |
|---|
Probab=96.82 E-value=0.0029 Score=54.58 Aligned_cols=73 Identities=12% Similarity=0.188 Sum_probs=49.6
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcC
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGF-KVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQ 80 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~ 80 (335)
+++|+++|+|+ |.+|+.++..|.+.|+ +|++.+|+..+.....+.+... ..+.... +.+ +..
T Consensus 124 l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~------~~~~~~~--~~~------l~~-- 186 (281)
T 3o8q_A 124 LKGATILLIGA-GGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAY------GEVKAQA--FEQ------LKQ-- 186 (281)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGG------SCEEEEE--GGG------CCS--
T ss_pred ccCCEEEEECc-hHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhcc------CCeeEee--HHH------hcC--
Confidence 35789999998 8999999999999996 8999999765544444433321 1233332 211 112
Q ss_pred CCCEEEEcccc
Q 019795 81 KFEAVIHFGAL 91 (335)
Q Consensus 81 ~~d~vi~~a~~ 91 (335)
.+|+||++...
T Consensus 187 ~aDiIInaTp~ 197 (281)
T 3o8q_A 187 SYDVIINSTSA 197 (281)
T ss_dssp CEEEEEECSCC
T ss_pred CCCEEEEcCcC
Confidence 68999997655
|
| >2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A* | Back alignment and structure |
|---|
Probab=96.81 E-value=0.0013 Score=54.56 Aligned_cols=67 Identities=18% Similarity=0.148 Sum_probs=45.5
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCC
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKF 82 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~ 82 (335)
++|+|.|+| +|.+|+.+++.|.+.|++|++.+|++.. .+.+.+ .++... +..++++ .+
T Consensus 27 ~~~~I~iiG-~G~~G~~la~~l~~~g~~V~~~~r~~~~----~~~~~~-------~g~~~~--------~~~~~~~--~~ 84 (215)
T 2vns_A 27 EAPKVGILG-SGDFARSLATRLVGSGFKVVVGSRNPKR----TARLFP-------SAAQVT--------FQEEAVS--SP 84 (215)
T ss_dssp --CCEEEEC-CSHHHHHHHHHHHHTTCCEEEEESSHHH----HHHHSB-------TTSEEE--------EHHHHTT--SC
T ss_pred CCCEEEEEc-cCHHHHHHHHHHHHCCCEEEEEeCCHHH----HHHHHH-------cCCcee--------cHHHHHh--CC
Confidence 356899999 6999999999999999999999886332 222211 123321 2445565 78
Q ss_pred CEEEEcccc
Q 019795 83 EAVIHFGAL 91 (335)
Q Consensus 83 d~vi~~a~~ 91 (335)
|+||.+...
T Consensus 85 DvVi~av~~ 93 (215)
T 2vns_A 85 EVIFVAVFR 93 (215)
T ss_dssp SEEEECSCG
T ss_pred CEEEECCCh
Confidence 999987553
|
| >1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A | Back alignment and structure |
|---|
Probab=96.81 E-value=0.0015 Score=58.07 Aligned_cols=74 Identities=15% Similarity=0.108 Sum_probs=49.9
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCH---HHHHHHHhc
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNK---DDLDKLFSS 79 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~---~~~~~~~~~ 79 (335)
.+++|||+|+ |.+|..+++.+...|++|+++++++.+.+. +.+.. .. ...|..+. +.+.++.
T Consensus 164 ~g~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~----~~~lG-------a~-~~~d~~~~~~~~~~~~~~-- 228 (339)
T 1rjw_A 164 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLEL----AKELG-------AD-LVVNPLKEDAAKFMKEKV-- 228 (339)
T ss_dssp TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHH----HHHTT-------CS-EEECTTTSCHHHHHHHHH--
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCHHHHHH----HHHCC-------CC-EEecCCCccHHHHHHHHh--
Confidence 4689999999 779999999999999999999886443222 22211 11 12355443 2344443
Q ss_pred CCCCEEEEcccc
Q 019795 80 QKFEAVIHFGAL 91 (335)
Q Consensus 80 ~~~d~vi~~a~~ 91 (335)
.++|+||++++.
T Consensus 229 ~~~d~vid~~g~ 240 (339)
T 1rjw_A 229 GGVHAAVVTAVS 240 (339)
T ss_dssp SSEEEEEESSCC
T ss_pred CCCCEEEECCCC
Confidence 379999998875
|
| >2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=96.81 E-value=0.0028 Score=56.56 Aligned_cols=35 Identities=20% Similarity=0.378 Sum_probs=29.3
Q ss_pred CCCCCeEEEEcCCChhhHHHHHHHHhC-CCeEEEEe
Q 019795 1 MASEKNILVTGGAGFIGTHCALQLLQG-GFKVVLID 35 (335)
Q Consensus 1 ~~~~~~vlItGatG~iG~~l~~~L~~~-g~~V~~~~ 35 (335)
|++|++|.|.||||.+|+.+++.|.+. ..+++++.
T Consensus 1 m~~~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~ 36 (350)
T 2ep5_A 1 MADKIKVSLLGSTGMVGQKMVKMLAKHPYLELVKVS 36 (350)
T ss_dssp -CCCEEEEEESCSSHHHHHHHHHHTTCSSEEEEEEE
T ss_pred CCCCcEEEEECcCCHHHHHHHHHHHhCCCcEEEEEe
Confidence 777889999999999999999999876 35777775
|
| >3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae} | Back alignment and structure |
|---|
Probab=96.78 E-value=0.003 Score=54.50 Aligned_cols=100 Identities=15% Similarity=0.199 Sum_probs=56.6
Q ss_pred CCCCCeEEEEcCCChhhHHHHHHHHhC-CCeEEEE-ecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHh
Q 019795 1 MASEKNILVTGGAGFIGTHCALQLLQG-GFKVVLI-DNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFS 78 (335)
Q Consensus 1 ~~~~~~vlItGatG~iG~~l~~~L~~~-g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~ 78 (335)
|+++.+|.|.|++|-+|+.+++.+.+. +.+++++ +++.+.... ..+....+ +. ..++.-.+++.+++.
T Consensus 18 m~~~irV~V~Ga~GrMGr~i~~~v~~~~~~eLvg~vd~~~~~~~G--~d~gel~G------~~--~~gv~v~~dl~~ll~ 87 (288)
T 3ijp_A 18 GPGSMRLTVVGANGRMGRELITAIQRRKDVELCAVLVRKGSSFVD--KDASILIG------SD--FLGVRITDDPESAFS 87 (288)
T ss_dssp ---CEEEEESSTTSHHHHHHHHHHHTCSSEEEEEEBCCTTCTTTT--SBGGGGTT------CS--CCSCBCBSCHHHHTT
T ss_pred ccCCeEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCccccc--cchHHhhc------cC--cCCceeeCCHHHHhc
Confidence 566779999999999999999999875 7787765 553322100 00111110 00 111212234666776
Q ss_pred cCCCCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEec
Q 019795 79 SQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSS 131 (335)
Q Consensus 79 ~~~~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~S 131 (335)
.+|+||.+..+ ..+...++.|.+.|+ .+|..+
T Consensus 88 --~aDVvIDFT~p------------------~a~~~~~~~~l~~Gv-~vViGT 119 (288)
T 3ijp_A 88 --NTEGILDFSQP------------------QASVLYANYAAQKSL-IHIIGT 119 (288)
T ss_dssp --SCSEEEECSCH------------------HHHHHHHHHHHHHTC-EEEECC
T ss_pred --CCCEEEEcCCH------------------HHHHHHHHHHHHcCC-CEEEEC
Confidence 78999986532 123346677778875 555433
|
| >1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2 | Back alignment and structure |
|---|
Probab=96.77 E-value=0.0044 Score=57.44 Aligned_cols=122 Identities=20% Similarity=0.211 Sum_probs=71.3
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhC-----CCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHH
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQG-----GFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLF 77 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~-----g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~ 77 (335)
++++|.|.||++..|..|+..|+.+ +.+|++.++++....... .+.+...+.......+... .++.+++
T Consensus 27 ~~~KIaVIGaGsv~~~ala~~L~~~~~~l~~~eV~L~Di~~e~~~~~~-~~~~~~l~~~~~~~~I~~t-----~D~~eal 100 (472)
T 1u8x_X 27 KSFSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIA-GACDVFIREKAPDIEFAAT-----TDPEEAF 100 (472)
T ss_dssp CCEEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHH-HHHHHHHHHHCTTSEEEEE-----SCHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhCCCCCCCCEEEEEeCCHHHHHHHH-HHHHHHhccCCCCCEEEEE-----CCHHHHH
Confidence 3468999999776688888888887 678999999765433322 2211110000011222221 2355566
Q ss_pred hcCCCCEEEEcccccchhhhhcCh------------------HHHHHHhHHHHHHHHHHHHHcCCC-EEEEecc
Q 019795 78 SSQKFEAVIHFGALKAVAESVQHP------------------FRYFDNNLIGTINLYQAMAKYNCK-KLVFSSS 132 (335)
Q Consensus 78 ~~~~~d~vi~~a~~~~~~~~~~~~------------------~~~~~~nv~~~~~l~~~~~~~~~~-~~v~~Ss 132 (335)
+ +.|+||.+++.........+. .....-|+.....+++.+++...+ .++.+|-
T Consensus 101 ~--~AD~VViaag~~~~~g~~rd~~ip~k~g~~~~eT~G~ggl~~~~rni~i~~~i~~~i~~~~P~A~ii~~TN 172 (472)
T 1u8x_X 101 T--DVDFVMAHIRVGKYAMRALDEQIPLKYGVVGQETCGPGGIAYGMRSIGGVLEILDYMEKYSPDAWMLNYSN 172 (472)
T ss_dssp S--SCSEEEECCCTTHHHHHHHHHHHHHTTTCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCS
T ss_pred c--CCCEEEEcCCCccccccchhhhhhhhcCcccccccCchhHHHHhhhHHHHHHHHHHHHHHCCCeEEEEeCC
Confidence 6 789999999875432211110 112445777788888888887654 4444443
|
| >1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A* | Back alignment and structure |
|---|
Probab=96.76 E-value=0.0043 Score=55.24 Aligned_cols=110 Identities=16% Similarity=0.233 Sum_probs=68.5
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCC-------------------CchhhHHhhhhhcCCccccceeE
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGF-KVVLIDNLHN-------------------SVPEAVDRVKDLAGPELAKKLEF 62 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~-------------------~~~~~~~~~~~~~~~~~~~~i~~ 62 (335)
+..+|+|.|+ |.+|+++++.|+..|. ++++++...- +.....+++.++-+ ...+..
T Consensus 35 ~~~~VlivG~-GGlG~~ia~~La~~Gvg~itlvD~d~V~~sNL~rq~~~~~~diG~~Ka~~~~~~l~~lnp---~v~v~~ 110 (346)
T 1y8q_A 35 RASRVLLVGL-KGLGAEIAKNLILAGVKGLTMLDHEQVTPEDPGAQFLIRTGSVGRNRAEASLERAQNLNP---MVDVKV 110 (346)
T ss_dssp HTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCSSCGGGCTTSCSSCTTSBHHHHHHHHHHHTCT---TSEEEE
T ss_pred hCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEECCCcchhhCCCCCccccccCcCCHHHHHHHHHHhHCC---CeEEEE
Confidence 4578999997 8999999999999996 6888854321 22223333333211 134555
Q ss_pred EEccCCCHHHHHHHHhcCCCCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccCC
Q 019795 63 HVGDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQ 138 (335)
Q Consensus 63 ~~~Dl~d~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~ 138 (335)
+..++.+ ...++++ ++|+||.+... ...-..+-++|.+.+ ..+|..++.+.+|.
T Consensus 111 ~~~~~~~--~~~~~~~--~~dvVv~~~d~-----------------~~~r~~ln~~~~~~~-ip~i~~~~~G~~G~ 164 (346)
T 1y8q_A 111 DTEDIEK--KPESFFT--QFDAVCLTCCS-----------------RDVIVKVDQICHKNS-IKFFTGDVFGYHGY 164 (346)
T ss_dssp ECSCGGG--CCHHHHT--TCSEEEEESCC-----------------HHHHHHHHHHHHHTT-CEEEEEEEEBTEEE
T ss_pred EecccCc--chHHHhc--CCCEEEEcCCC-----------------HHHHHHHHHHHHHcC-CCEEEEeecccEEE
Confidence 5555543 2345676 78999975332 122234666777776 47888777776654
|
| >3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A | Back alignment and structure |
|---|
Probab=96.75 E-value=0.0029 Score=58.73 Aligned_cols=36 Identities=22% Similarity=0.350 Sum_probs=32.2
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCC
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLH 38 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~ 38 (335)
.+.+|||+||+|.+|...++.+...|++|+++++++
T Consensus 228 ~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~ 263 (456)
T 3krt_A 228 QGDNVLIWGASGGLGSYATQFALAGGANPICVVSSP 263 (456)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCH
Confidence 467899999999999999999999999999988753
|
| >3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=96.73 E-value=0.0021 Score=55.19 Aligned_cols=72 Identities=18% Similarity=0.297 Sum_probs=48.3
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCC
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGF-KVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQK 81 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~ 81 (335)
++|+++|+|+ |.+|+.++..|.+.|. +|++++|+..+..+..+.+.. ..+..+ ++.+ +.. ..
T Consensus 119 ~~k~~lvlGa-Gg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~-------~~~~~~--~~~~---l~~----~~ 181 (272)
T 3pwz_A 119 RNRRVLLLGA-GGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDH-------SRLRIS--RYEA---LEG----QS 181 (272)
T ss_dssp TTSEEEEECC-SHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCC-------TTEEEE--CSGG---GTT----CC
T ss_pred cCCEEEEECc-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcc-------CCeeEe--eHHH---hcc----cC
Confidence 5789999998 8999999999999995 899999875544433333221 123332 2222 111 37
Q ss_pred CCEEEEcccc
Q 019795 82 FEAVIHFGAL 91 (335)
Q Consensus 82 ~d~vi~~a~~ 91 (335)
+|+||++...
T Consensus 182 ~DivInaTp~ 191 (272)
T 3pwz_A 182 FDIVVNATSA 191 (272)
T ss_dssp CSEEEECSSG
T ss_pred CCEEEECCCC
Confidence 8999998654
|
| >4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A* | Back alignment and structure |
|---|
Probab=96.73 E-value=0.0067 Score=54.33 Aligned_cols=70 Identities=27% Similarity=0.362 Sum_probs=50.2
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCC-CHHHHHHHHhcCCC
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLR-NKDDLDKLFSSQKF 82 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~-d~~~~~~~~~~~~~ 82 (335)
||+|+|+|| |..|..+++.+.+.|++|++++.++....... . + +++..|.. |.+.+..+.+ ++
T Consensus 1 MK~I~ilGg-g~~g~~~~~~Ak~~G~~vv~vd~~~~~~~~~~---a--------D--~~~~~~~~~d~~~~~~~~~--~~ 64 (363)
T 4ffl_A 1 MKTICLVGG-KLQGFEAAYLSKKAGMKVVLVDKNPQALIRNY---A--------D--EFYCFDVIKEPEKLLELSK--RV 64 (363)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCTTCTTTTT---S--------S--EEEECCTTTCHHHHHHHHT--SS
T ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCChhHhh---C--------C--EEEECCCCcCHHHHHHHhc--CC
Confidence 799999996 89999999999999999999987665432111 0 1 34555654 5555655555 79
Q ss_pred CEEEEcc
Q 019795 83 EAVIHFG 89 (335)
Q Consensus 83 d~vi~~a 89 (335)
|+|+-..
T Consensus 65 D~v~~~~ 71 (363)
T 4ffl_A 65 DAVLPVN 71 (363)
T ss_dssp SEEEECC
T ss_pred CEEEECC
Confidence 9887543
|
| >4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens} | Back alignment and structure |
|---|
Probab=96.70 E-value=0.0022 Score=57.47 Aligned_cols=38 Identities=26% Similarity=0.305 Sum_probs=32.0
Q ss_pred CCCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCC
Q 019795 1 MASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHN 39 (335)
Q Consensus 1 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 39 (335)
||++|+|.|.|. |.+|..+++.|++.|++|++.+|++.
T Consensus 19 Mm~~mkIgiIGl-G~mG~~~A~~L~~~G~~V~v~dr~~~ 56 (358)
T 4e21_A 19 YFQSMQIGMIGL-GRMGADMVRRLRKGGHECVVYDLNVN 56 (358)
T ss_dssp ---CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred hhcCCEEEEECc-hHHHHHHHHHHHhCCCEEEEEeCCHH
Confidence 677889999995 99999999999999999999998644
|
| >3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A | Back alignment and structure |
|---|
Probab=96.69 E-value=0.012 Score=52.05 Aligned_cols=36 Identities=14% Similarity=0.271 Sum_probs=29.6
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhC-CCeEEEEecCC
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQG-GFKVVLIDNLH 38 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~-g~~V~~~~r~~ 38 (335)
.|++|.|.||||++|+.|++.|.+. .+++..+..+.
T Consensus 3 ~M~kv~IvGatG~vG~~l~~~L~~~p~~el~~l~s~~ 39 (337)
T 3dr3_A 3 AMLNTLIVGASGYAGAELVTYVNRHPHMNITALTVSA 39 (337)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEET
T ss_pred CceEEEEECCCChHHHHHHHHHHhCCCCcEEEEEecC
Confidence 4679999999999999999999884 57777765443
|
| >2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C* | Back alignment and structure |
|---|
Probab=96.69 E-value=0.012 Score=52.17 Aligned_cols=95 Identities=11% Similarity=0.095 Sum_probs=56.0
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCC---CeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGG---FKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS 79 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~ 79 (335)
+|++|.|.||||.+|+.+++.|.+++ .+++++......... +. .. ...+.+...| ++ .++
T Consensus 2 ~~~kV~I~GAtG~iG~~llr~L~~~~~p~~elv~i~s~~~~G~~----~~-~~----~~~i~~~~~~---~~----~~~- 64 (336)
T 2r00_A 2 QQFNVAIFGATGAVGETMLEVLQEREFPVDELFLLASERSEGKT----YR-FN----GKTVRVQNVE---EF----DWS- 64 (336)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTTTTCE----EE-ET----TEEEEEEEGG---GC----CGG-
T ss_pred CccEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEEECCCCCCCc----ee-ec----CceeEEecCC---hH----Hhc-
Confidence 46799999999999999999999873 466666532111000 00 00 0222222222 11 233
Q ss_pred CCCCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEecccc
Q 019795 80 QKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSAT 134 (335)
Q Consensus 80 ~~~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~ 134 (335)
++|+||-+.+... +...+..+.+.|+ ++|-.|+..
T Consensus 65 -~vDvVf~a~g~~~------------------s~~~a~~~~~~G~-~vId~s~~~ 99 (336)
T 2r00_A 65 -QVHIALFSAGGEL------------------SAKWAPIAAEAGV-VVIDNTSHF 99 (336)
T ss_dssp -GCSEEEECSCHHH------------------HHHHHHHHHHTTC-EEEECSSTT
T ss_pred -CCCEEEECCCchH------------------HHHHHHHHHHcCC-EEEEcCCcc
Confidence 6899998765421 2235556667776 678888764
|
| >1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T* | Back alignment and structure |
|---|
Probab=96.67 E-value=0.015 Score=51.07 Aligned_cols=113 Identities=13% Similarity=0.167 Sum_probs=67.7
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCC--eEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcC
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGF--KVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQ 80 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~ 80 (335)
++|+|.|+|+ |.+|..++..|+..|+ +|+++++++.........+.+... ......+... .+.+ .+.
T Consensus 6 ~~mkI~IiGa-G~vG~~~a~~l~~~g~~~~V~l~d~~~~~~~~~~~~~~~~~~--~~~~~~v~~~--~~~~----~~~-- 74 (319)
T 1lld_A 6 KPTKLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSS--FYPTVSIDGS--DDPE----ICR-- 74 (319)
T ss_dssp -CCEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGG--GSTTCEEEEE--SCGG----GGT--
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHhhhh--hcCCeEEEeC--CCHH----HhC--
Confidence 3568999998 9999999999999998 999999864322211111111110 0011222211 1222 344
Q ss_pred CCCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEE
Q 019795 81 KFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLV 128 (335)
Q Consensus 81 ~~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v 128 (335)
.+|+||-+++..... .+.-..+...|+.....+++.+.+.+.+.+|
T Consensus 75 ~aD~Vii~v~~~~~~--g~~r~~~~~~n~~~~~~~~~~i~~~~~~~~v 120 (319)
T 1lld_A 75 DADMVVITAGPRQKP--GQSRLELVGATVNILKAIMPNLVKVAPNAIY 120 (319)
T ss_dssp TCSEEEECCCCCCCT--TCCHHHHHHHHHHHHHHHHHHHHHHCTTSEE
T ss_pred CCCEEEECCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHhCCCceE
Confidence 689999988754321 2333456777888888888887765433333
|
| >3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=96.67 E-value=0.0017 Score=60.05 Aligned_cols=35 Identities=31% Similarity=0.364 Sum_probs=31.5
Q ss_pred CeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCC
Q 019795 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNS 40 (335)
Q Consensus 5 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~ 40 (335)
|+|.|.|+ |.+|..++..|++.|++|+++++++.+
T Consensus 3 mkI~VIG~-G~vG~~lA~~La~~G~~V~~~D~~~~~ 37 (450)
T 3gg2_A 3 LDIAVVGI-GYVGLVSATCFAELGANVRCIDTDRNK 37 (450)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred CEEEEECc-CHHHHHHHHHHHhcCCEEEEEECCHHH
Confidence 68999996 999999999999999999999986543
|
| >1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1 | Back alignment and structure |
|---|
Probab=96.66 E-value=0.0096 Score=52.39 Aligned_cols=113 Identities=16% Similarity=0.171 Sum_probs=69.9
Q ss_pred CeEEEEcCCChhhHHHHHHHHhCCC--eEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCC
Q 019795 5 KNILVTGGAGFIGTHCALQLLQGGF--KVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKF 82 (335)
Q Consensus 5 ~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~ 82 (335)
|+|.|+|+ |.+|..++..|+..|+ +|+++++++.........+.+... .. ....+.. +|.+ .++ ..
T Consensus 1 mkI~VIGa-G~~G~~la~~l~~~g~~~~V~l~D~~~~~~~~~~~~l~~~~~-~~-~~~~i~~---~d~~----~~~--~a 68 (319)
T 1a5z_A 1 MKIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTP-FT-RRANIYA---GDYA----DLK--GS 68 (319)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGG-GS-CCCEEEE---CCGG----GGT--TC
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHHHHHhhhh-hc-CCcEEEe---CCHH----HhC--CC
Confidence 47999998 9999999999999998 999999865433332222221110 00 1112221 2322 344 78
Q ss_pred CEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCC-EEEEec
Q 019795 83 EAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCK-KLVFSS 131 (335)
Q Consensus 83 d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~-~~v~~S 131 (335)
|+||-+++..... ...-......|+.....+++.+.+.... .+|.+|
T Consensus 69 DvViiav~~~~~~--g~~r~dl~~~n~~i~~~i~~~i~~~~~~~~ii~~t 116 (319)
T 1a5z_A 69 DVVIVAAGVPQKP--GETRLQLLGRNARVMKEIARNVSKYAPDSIVIVVT 116 (319)
T ss_dssp SEEEECCCCCCCS--SCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred CEEEEccCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeC
Confidence 9999988764321 1122356677888888888888776433 455544
|
| >4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A | Back alignment and structure |
|---|
Probab=96.64 E-value=0.0067 Score=57.47 Aligned_cols=83 Identities=17% Similarity=0.217 Sum_probs=53.8
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCC-------------------CchhhHHhhhhhcCCccccceeE
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGF-KVVLIDNLHN-------------------SVPEAVDRVKDLAGPELAKKLEF 62 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~-------------------~~~~~~~~~~~~~~~~~~~~i~~ 62 (335)
++++|+|.|+ |.+|+++++.|+..|. ++++++.+.- +...+.+++.++-+ .-.+..
T Consensus 325 ~~arVLIVGa-GGLGs~vA~~La~aGVG~ItLvD~D~Ve~SNL~RQ~L~~~~dIG~~KAeaaa~~L~~iNP---~V~v~~ 400 (615)
T 4gsl_A 325 KNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFP---LMDATG 400 (615)
T ss_dssp HTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCBCCTTGGGTSTTCCGGGTTSBHHHHHHHHHHHHCT---TCEEEE
T ss_pred hCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCCCcccCcccccCCChhhcChHHHHHHHHHHHhhCC---CcEEEE
Confidence 4578999998 9999999999999994 6788877542 22333334443321 123444
Q ss_pred EEccC--------------CCHHHHHHHHhcCCCCEEEEcccc
Q 019795 63 HVGDL--------------RNKDDLDKLFSSQKFEAVIHFGAL 91 (335)
Q Consensus 63 ~~~Dl--------------~d~~~~~~~~~~~~~d~vi~~a~~ 91 (335)
+..++ .+.+.+.++++ ++|+||.+...
T Consensus 401 ~~~~Ipm~gh~v~~e~~~~l~~~~l~~ll~--~~DlVvd~tDn 441 (615)
T 4gsl_A 401 VKLSIPMIGHKLVNEEAQHKDFDRLRALIK--EHDIIFLLVDS 441 (615)
T ss_dssp ECCCCCCTTCCCSCHHHHHHHHHHHHHHHH--HCSEEEECCSS
T ss_pred eeccccccCccccchhhhcCCHHHHHHHhh--cCCEEEecCCC
Confidence 44443 12345667777 78999987554
|
| >4dpk_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; 2.05A {Sulfolobus tokodaii} PDB: 4dpm_A* | Back alignment and structure |
|---|
Probab=96.63 E-value=0.0042 Score=55.56 Aligned_cols=35 Identities=14% Similarity=0.238 Sum_probs=26.7
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCC-CeEEEEec
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGG-FKVVLIDN 36 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r 36 (335)
.++.+|.|.||||++|..|.+.|.+.. .++..+..
T Consensus 5 ~~~~kVaIvGATGyvG~eLlrlL~~hP~~el~~l~S 40 (359)
T 4dpk_A 5 RRTLKAAILGATGLVGIEYVRMLSNHPYIKPAYLAG 40 (359)
T ss_dssp -CCEEEEETTTTSTTHHHHHHHHTTCSSEEEEEEEE
T ss_pred CCCCeEEEECCCCHHHHHHHHHHHhCCCceEEEEEC
Confidence 345689999999999999999887653 46665543
|
| >4dpl_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; HET: NAP; 1.90A {Sulfolobus tokodaii} PDB: 4dpk_A* 4dpm_A* | Back alignment and structure |
|---|
Probab=96.63 E-value=0.0042 Score=55.56 Aligned_cols=35 Identities=14% Similarity=0.238 Sum_probs=26.7
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCC-CeEEEEec
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGG-FKVVLIDN 36 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r 36 (335)
.++.+|.|.||||++|..|.+.|.+.. .++..+..
T Consensus 5 ~~~~kVaIvGATGyvG~eLlrlL~~hP~~el~~l~S 40 (359)
T 4dpl_A 5 RRTLKAAILGATGLVGIEYVRMLSNHPYIKPAYLAG 40 (359)
T ss_dssp -CCEEEEETTTTSTTHHHHHHHHTTCSSEEEEEEEE
T ss_pred CCCCeEEEECCCCHHHHHHHHHHHhCCCceEEEEEC
Confidence 345689999999999999999887653 46665543
|
| >1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii} | Back alignment and structure |
|---|
Probab=96.62 E-value=0.008 Score=53.74 Aligned_cols=34 Identities=18% Similarity=0.278 Sum_probs=28.7
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhCC-CeEEEEecC
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQGG-FKVVLIDNL 37 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~ 37 (335)
+++|.|.||||.+|+.+++.|.+.+ .+|+++.++
T Consensus 8 ~~kV~IiGAtG~iG~~llr~L~~~p~~ev~~i~~s 42 (354)
T 1ys4_A 8 KIKVGVLGATGSVGQRFVQLLADHPMFELTALAAS 42 (354)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEEC
T ss_pred cceEEEECcCCHHHHHHHHHHhcCCCCEEEEEEcc
Confidence 4689999999999999999998764 678878654
|
| >2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis} | Back alignment and structure |
|---|
Probab=96.61 E-value=0.0013 Score=57.70 Aligned_cols=36 Identities=33% Similarity=0.559 Sum_probs=31.0
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCC
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHN 39 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 39 (335)
+||+|.|.|+ |.+|+.++..|.+.|++|++++|++.
T Consensus 2 ~~m~i~iiG~-G~~G~~~a~~l~~~g~~V~~~~r~~~ 37 (316)
T 2ew2_A 2 NAMKIAIAGA-GAMGSRLGIMLHQGGNDVTLIDQWPA 37 (316)
T ss_dssp --CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CCCeEEEECc-CHHHHHHHHHHHhCCCcEEEEECCHH
Confidence 3568999997 99999999999999999999988643
|
| >3ax6_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp, ATP binding; HET: ADP; 2.20A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=96.60 E-value=0.011 Score=53.34 Aligned_cols=69 Identities=23% Similarity=0.303 Sum_probs=52.6
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCCC
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKFE 83 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~d 83 (335)
||+|+|+|+ |.+|+.+++.|.+.|++|++++..+..... .+ . -..+..|..|.+.+.+++. ++|
T Consensus 1 M~~Ililg~-g~~g~~~~~a~~~~G~~v~~~~~~~~~~~~---~~---------~-~~~~~~~~~d~~~l~~~~~--~~d 64 (380)
T 3ax6_A 1 MKKIGIIGG-GQLGKMMTLEAKKMGFYVIVLDPTPRSPAG---QV---------A-DEQIVAGFFDSERIEDLVK--GSD 64 (380)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSTTCTTG---GG---------S-SEEEECCTTCHHHHHHHHH--TCS
T ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCCchh---hh---------C-ceEEECCCCCHHHHHHHHh--cCC
Confidence 579999997 899999999999999999999875443211 01 1 1346678899998988886 789
Q ss_pred EEEEc
Q 019795 84 AVIHF 88 (335)
Q Consensus 84 ~vi~~ 88 (335)
.|+..
T Consensus 65 ~v~~~ 69 (380)
T 3ax6_A 65 VTTYD 69 (380)
T ss_dssp EEEES
T ss_pred EEEec
Confidence 98853
|
| >1y8q_B Anthracycline-, ubiquitin-like 2 activating enzyme E1B; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_B* 3kyc_B* 3kyd_B* 2px9_A | Back alignment and structure |
|---|
Probab=96.59 E-value=0.0055 Score=58.60 Aligned_cols=110 Identities=22% Similarity=0.195 Sum_probs=67.1
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCCc-------------------hhhHHhhhhhcCCccccceeEE
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQGGF-KVVLIDNLHNSV-------------------PEAVDRVKDLAGPELAKKLEFH 63 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~-------------------~~~~~~~~~~~~~~~~~~i~~~ 63 (335)
..+|+|.|+ |.+|.++++.|+..|. ++++++...-.. ..+.+++..+- ..-.+..+
T Consensus 17 ~s~VlVVGa-GGLGsevak~La~aGVG~ItlvD~D~Ve~SNLnRQflf~~~dVGk~KAeaaa~~L~~iN---P~v~V~a~ 92 (640)
T 1y8q_B 17 GGRVLVVGA-GGIGCELLKNLVLTGFSHIDLIDLDTIDVSNLNRQFLFQKKHVGRSKAQVAKESVLQFY---PKANIVAY 92 (640)
T ss_dssp HCEEEEECC-SHHHHHHHHHHHHHTCCEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHTTC---TTCEEEEE
T ss_pred cCeEEEECc-CHHHHHHHHHHHHcCCCeEEEecCCEEChhhcCCCcCCChhHcChHHHHHHHHHHHHHC---CCCeEEEE
Confidence 468999998 9999999999999985 688887654221 11222222221 12456667
Q ss_pred EccCCCHHHHHHHHhcCCCCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccC
Q 019795 64 VGDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYG 137 (335)
Q Consensus 64 ~~Dl~d~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg 137 (335)
..++++......+++ ++|+||.+... +..-..+-+.|...++ .+|..++.+.+|
T Consensus 93 ~~~i~~~~~~~~~~~--~~DlVvda~Dn-----------------~~aR~~ln~~c~~~~i-PlI~~g~~G~~G 146 (640)
T 1y8q_B 93 HDSIMNPDYNVEFFR--QFILVMNALDN-----------------RAARNHVNRMCLAADV-PLIESGTAGYLG 146 (640)
T ss_dssp ESCTTSTTSCHHHHT--TCSEEEECCSC-----------------HHHHHHHHHHHHHHTC-CEEEEEEETTEE
T ss_pred ecccchhhhhHhhhc--CCCEEEECCCC-----------------HHHHHHHHHHHHHcCC-CEEEEEEecccc
Confidence 777754332245666 78999986332 2223345666777764 566666555433
|
| >1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8 | Back alignment and structure |
|---|
Probab=96.55 E-value=0.0069 Score=46.26 Aligned_cols=36 Identities=22% Similarity=0.337 Sum_probs=30.1
Q ss_pred CCCCeEEEEcCC---ChhhHHHHHHHHhCCCeEEEEecC
Q 019795 2 ASEKNILVTGGA---GFIGTHCALQLLQGGFKVVLIDNL 37 (335)
Q Consensus 2 ~~~~~vlItGat---G~iG~~l~~~L~~~g~~V~~~~r~ 37 (335)
+..++|.|.|+| |-+|..+++.|.+.|++|+.++++
T Consensus 12 ~~p~~IavIGaS~~~g~~G~~~~~~L~~~G~~V~~vnp~ 50 (138)
T 1y81_A 12 KEFRKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPN 50 (138)
T ss_dssp --CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTT
T ss_pred cCCCeEEEEeecCCCCCHHHHHHHHHHHCCCEEEEeCCC
Confidence 456899999997 899999999999999997777654
|
| >1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A* | Back alignment and structure |
|---|
Probab=96.53 E-value=0.035 Score=46.69 Aligned_cols=75 Identities=16% Similarity=0.146 Sum_probs=48.5
Q ss_pred CeEEEEcCCChhhHHHHHHHHhC-CCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHh---cC
Q 019795 5 KNILVTGGAGFIGTHCALQLLQG-GFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFS---SQ 80 (335)
Q Consensus 5 ~~vlItGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~---~~ 80 (335)
++|.|.|++|-+|+.+++.+.+. +++++++........+... .... +..|.+.++...+.+. +.
T Consensus 1 mkV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~~dl~~~~~-----------~~~D-vvIDfT~p~a~~~~~~~a~~~ 68 (245)
T 1p9l_A 1 MRVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAGDPLSLLTD-----------GNTE-VVIDFTHPDVVMGNLEFLIDN 68 (245)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTTCCTHHHHH-----------TTCC-EEEECSCTTTHHHHHHHHHHT
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccCCCHHHHhc-----------cCCc-EEEEccChHHHHHHHHHHHHc
Confidence 48999999999999999999876 8998866543332222111 1122 5567777665554332 34
Q ss_pred CCCEEEEcccc
Q 019795 81 KFEAVIHFGAL 91 (335)
Q Consensus 81 ~~d~vi~~a~~ 91 (335)
+.++|+-..|.
T Consensus 69 g~~~VigTTG~ 79 (245)
T 1p9l_A 69 GIHAVVGTTGF 79 (245)
T ss_dssp TCEEEECCCCC
T ss_pred CCCEEEcCCCC
Confidence 77888865554
|
| >3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A | Back alignment and structure |
|---|
Probab=96.53 E-value=0.0037 Score=55.90 Aligned_cols=26 Identities=19% Similarity=0.332 Sum_probs=23.4
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhCCC
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQGGF 29 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~g~ 29 (335)
+++|.|.||||++|..|++.|.+.++
T Consensus 2 ~~kVaIvGATG~vG~eLlrlL~~~~~ 27 (366)
T 3pwk_A 2 GYTVAVVGATGAVGAQMIKMLEESTL 27 (366)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTCCC
T ss_pred CcEEEEECCCChHHHHHHHHHhcCCC
Confidence 56899999999999999999988755
|
| >2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A* | Back alignment and structure |
|---|
Probab=96.52 E-value=0.0042 Score=55.39 Aligned_cols=76 Identities=16% Similarity=0.225 Sum_probs=50.0
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCH---HHHHHHHh
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGF-KVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNK---DDLDKLFS 78 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~---~~~~~~~~ 78 (335)
.+.+|||+|+ |.+|..+++.+...|+ +|+++++++.+. +.+.+.. .. ...|..++ +.+.++..
T Consensus 167 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~----~~~~~~G-------a~-~~~~~~~~~~~~~v~~~~~ 233 (348)
T 2d8a_A 167 SGKSVLITGA-GPLGLLGIAVAKASGAYPVIVSEPSDFRR----ELAKKVG-------AD-YVINPFEEDVVKEVMDITD 233 (348)
T ss_dssp TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHH----HHHHHHT-------CS-EEECTTTSCHHHHHHHHTT
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHH----HHHHHhC-------CC-EEECCCCcCHHHHHHHHcC
Confidence 4678999999 9999999999999999 899998864322 2222211 11 11344332 23444433
Q ss_pred cCCCCEEEEcccc
Q 019795 79 SQKFEAVIHFGAL 91 (335)
Q Consensus 79 ~~~~d~vi~~a~~ 91 (335)
..++|+||++++.
T Consensus 234 g~g~D~vid~~g~ 246 (348)
T 2d8a_A 234 GNGVDVFLEFSGA 246 (348)
T ss_dssp TSCEEEEEECSCC
T ss_pred CCCCCEEEECCCC
Confidence 3479999999875
|
| >4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=96.50 E-value=0.0013 Score=54.69 Aligned_cols=40 Identities=20% Similarity=0.238 Sum_probs=33.6
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEE-EecCCCCch
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVL-IDNLHNSVP 42 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~-~~r~~~~~~ 42 (335)
|+||+|.|.| +|.+|..+++.|.+.|++|++ .+|++....
T Consensus 21 m~mmkI~IIG-~G~mG~~la~~l~~~g~~V~~v~~r~~~~~~ 61 (220)
T 4huj_A 21 QSMTTYAIIG-AGAIGSALAERFTAAQIPAIIANSRGPASLS 61 (220)
T ss_dssp GGSCCEEEEE-CHHHHHHHHHHHHHTTCCEEEECTTCGGGGH
T ss_pred hcCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEECCCHHHHH
Confidence 4578999999 599999999999999999998 777655433
|
| >3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A | Back alignment and structure |
|---|
Probab=96.49 E-value=0.009 Score=56.55 Aligned_cols=83 Identities=17% Similarity=0.223 Sum_probs=53.8
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCC-------------------CCchhhHHhhhhhcCCccccceeE
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGF-KVVLIDNLH-------------------NSVPEAVDRVKDLAGPELAKKLEF 62 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~-------------------~~~~~~~~~~~~~~~~~~~~~i~~ 62 (335)
+.++|+|.|+ |.+|+++++.|+..|. +++++|.+. ++...+.+++.++-+ .-.++.
T Consensus 326 ~~~kVLIVGa-GGLGs~va~~La~aGVG~ItLvD~D~Ve~SNL~RQ~L~~~~DvG~~KAeaaa~~L~~iNP---~v~v~~ 401 (598)
T 3vh1_A 326 KNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFP---LMDATG 401 (598)
T ss_dssp HTCEEEEECC-SHHHHHHHHHHHTTTCCEEEEECCSBCCTTSTTTSTTCCSTTCSSBHHHHHHHHHHHHCT---TCEEEE
T ss_pred hCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCcccccccccccccchhhcCcHHHHHHHHHHHhHCC---CcEEEE
Confidence 3578999998 9999999999999995 577775542 223334444444321 123444
Q ss_pred EEccC--------------CCHHHHHHHHhcCCCCEEEEcccc
Q 019795 63 HVGDL--------------RNKDDLDKLFSSQKFEAVIHFGAL 91 (335)
Q Consensus 63 ~~~Dl--------------~d~~~~~~~~~~~~~d~vi~~a~~ 91 (335)
+..++ .+.+.+.++++ ++|+||.+...
T Consensus 402 ~~~~I~~pgh~i~~~~~~~l~~~~l~~li~--~~DvVvdatDn 442 (598)
T 3vh1_A 402 VKLSIPMIGHKLVNEEAQHKDFDRLRALIK--EHDIIFLLVDS 442 (598)
T ss_dssp ECCCCCCSSCCCCSHHHHHHHHHHHHHHHH--HCSEEEECCSB
T ss_pred EeccccccCcccccccccccCHHHHHHHHh--cCCEEEECCCC
Confidence 54443 13355677887 68999986443
|
| >3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa} | Back alignment and structure |
|---|
Probab=96.48 E-value=0.0075 Score=54.04 Aligned_cols=79 Identities=15% Similarity=0.169 Sum_probs=52.3
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCe-EEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHH----HHH
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFK-VVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLD----KLF 77 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~----~~~ 77 (335)
.+.+|||+|+ |.+|...++.+...|.+ |+++++++.+.+. ++++ . +.+..+..|-.+.+++. ++.
T Consensus 179 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~----a~~l-~----~~~~~~~~~~~~~~~~~~~v~~~t 248 (363)
T 3m6i_A 179 LGDPVLICGA-GPIGLITMLCAKAAGACPLVITDIDEGRLKF----AKEI-C----PEVVTHKVERLSAEESAKKIVESF 248 (363)
T ss_dssp TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEEESCHHHHHH----HHHH-C----TTCEEEECCSCCHHHHHHHHHHHT
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHH----HHHh-c----hhcccccccccchHHHHHHHHHHh
Confidence 4678999998 99999999999889987 8888876443322 2222 1 23333444433444443 333
Q ss_pred hcCCCCEEEEcccc
Q 019795 78 SSQKFEAVIHFGAL 91 (335)
Q Consensus 78 ~~~~~d~vi~~a~~ 91 (335)
...++|+||.+.+.
T Consensus 249 ~g~g~Dvvid~~g~ 262 (363)
T 3m6i_A 249 GGIEPAVALECTGV 262 (363)
T ss_dssp SSCCCSEEEECSCC
T ss_pred CCCCCCEEEECCCC
Confidence 33579999998875
|
| >1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A | Back alignment and structure |
|---|
Probab=96.48 E-value=0.008 Score=53.84 Aligned_cols=81 Identities=14% Similarity=0.148 Sum_probs=50.2
Q ss_pred CeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEcc-C--CC-HHHHHHHH--h
Q 019795 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGD-L--RN-KDDLDKLF--S 78 (335)
Q Consensus 5 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D-l--~d-~~~~~~~~--~ 78 (335)
.+|||+||+|.+|..+++.+...|++|++++++..+..+..+.+.++.. . ..+..+ . .+ .+.+.++. .
T Consensus 169 ~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa-----~-~vi~~~~~~~~~~~~~i~~~t~~~ 242 (364)
T 1gu7_A 169 DWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGA-----T-QVITEDQNNSREFGPTIKEWIKQS 242 (364)
T ss_dssp CEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTC-----S-EEEEHHHHHCGGGHHHHHHHHHHH
T ss_pred cEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCccccHHHHHHHHhcCC-----e-EEEecCccchHHHHHHHHHHhhcc
Confidence 7999999999999999998888899999988765542111222222211 1 112211 0 11 23444544 3
Q ss_pred cCCCCEEEEcccc
Q 019795 79 SQKFEAVIHFGAL 91 (335)
Q Consensus 79 ~~~~d~vi~~a~~ 91 (335)
..++|+||.+++.
T Consensus 243 ~~g~Dvvid~~G~ 255 (364)
T 1gu7_A 243 GGEAKLALNCVGG 255 (364)
T ss_dssp TCCEEEEEESSCH
T ss_pred CCCceEEEECCCc
Confidence 3479999998774
|
| >3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=96.47 E-value=0.0047 Score=53.76 Aligned_cols=42 Identities=14% Similarity=0.075 Sum_probs=34.9
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhh
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEA 44 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~ 44 (335)
.++++|.|.|. |.+|..+++.|++.|++|++.+|++.+....
T Consensus 13 ~~~~~I~vIG~-G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~ 54 (296)
T 3qha_A 13 TEQLKLGYIGL-GNMGAPMATRMTEWPGGVTVYDIRIEAMTPL 54 (296)
T ss_dssp --CCCEEEECC-STTHHHHHHHHTTSTTCEEEECSSTTTSHHH
T ss_pred cCCCeEEEECc-CHHHHHHHHHHHHCCCeEEEEeCCHHHHHHH
Confidence 34568999995 9999999999999999999999987765443
|
| >1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=96.45 E-value=0.0099 Score=53.00 Aligned_cols=76 Identities=16% Similarity=0.072 Sum_probs=50.4
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCC----HHHHHHHHh
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRN----KDDLDKLFS 78 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d----~~~~~~~~~ 78 (335)
.+.+|||+|+ |.+|..+++.+...|++|+++++++.+.. .+.++. .. .. .|..+ .+.+.+...
T Consensus 168 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~----~~~~lG-----a~-~~--~~~~~~~~~~~~i~~~~~ 234 (352)
T 1e3j_A 168 LGTTVLVIGA-GPIGLVSVLAAKAYGAFVVCTARSPRRLE----VAKNCG-----AD-VT--LVVDPAKEEESSIIERIR 234 (352)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHH----HHHHTT-----CS-EE--EECCTTTSCHHHHHHHHH
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEcCCHHHHH----HHHHhC-----CC-EE--EcCcccccHHHHHHHHhc
Confidence 4679999997 99999999999889999998887543322 222221 11 12 23332 345555553
Q ss_pred ---cCCCCEEEEcccc
Q 019795 79 ---SQKFEAVIHFGAL 91 (335)
Q Consensus 79 ---~~~~d~vi~~a~~ 91 (335)
..++|+||++++.
T Consensus 235 ~~~g~g~D~vid~~g~ 250 (352)
T 1e3j_A 235 SAIGDLPNVTIDCSGN 250 (352)
T ss_dssp HHSSSCCSEEEECSCC
T ss_pred cccCCCCCEEEECCCC
Confidence 3479999998875
|
| >3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp} | Back alignment and structure |
|---|
Probab=96.45 E-value=0.0063 Score=52.10 Aligned_cols=35 Identities=23% Similarity=0.369 Sum_probs=32.2
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEec
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDN 36 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r 36 (335)
+++|+++|.|+++.+|+.++..|++.|..|+++.+
T Consensus 158 l~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~ 192 (285)
T 3p2o_A 158 LEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHI 192 (285)
T ss_dssp CTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECT
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeC
Confidence 46899999999999999999999999999988765
|
| >3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=96.44 E-value=0.0055 Score=53.69 Aligned_cols=40 Identities=23% Similarity=0.397 Sum_probs=34.6
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCch
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVP 42 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~ 42 (335)
..||+|.|.|. |.+|..+++.|++.|++|++.+|++.+..
T Consensus 19 ~~m~~I~iIG~-G~mG~~~A~~l~~~G~~V~~~dr~~~~~~ 58 (310)
T 3doj_A 19 SHMMEVGFLGL-GIMGKAMSMNLLKNGFKVTVWNRTLSKCD 58 (310)
T ss_dssp CCSCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSGGGGH
T ss_pred ccCCEEEEECc-cHHHHHHHHHHHHCCCeEEEEeCCHHHHH
Confidence 45789999985 99999999999999999999998765443
|
| >2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A* | Back alignment and structure |
|---|
Probab=96.41 E-value=0.0045 Score=55.40 Aligned_cols=75 Identities=16% Similarity=0.159 Sum_probs=51.7
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCC
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKF 82 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~ 82 (335)
.+.+|||+|+ |.+|..+++.+...|.+|+++++++.+.....+++ + .. .+ .|..+.+.+.++.. ++
T Consensus 180 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~~l----G----a~-~v--i~~~~~~~~~~~~~--g~ 245 (357)
T 2cf5_A 180 PGLRGGILGL-GGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDL----G----AD-DY--VIGSDQAKMSELAD--SL 245 (357)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHTTS----C----CS-CE--EETTCHHHHHHSTT--TE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHc----C----Cc-ee--eccccHHHHHHhcC--CC
Confidence 5679999996 99999999988888999999998654432222111 1 11 11 24455556666554 79
Q ss_pred CEEEEcccc
Q 019795 83 EAVIHFGAL 91 (335)
Q Consensus 83 d~vi~~a~~ 91 (335)
|+||.+++.
T Consensus 246 D~vid~~g~ 254 (357)
T 2cf5_A 246 DYVIDTVPV 254 (357)
T ss_dssp EEEEECCCS
T ss_pred CEEEECCCC
Confidence 999999875
|
| >3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str} | Back alignment and structure |
|---|
Probab=96.39 E-value=0.0054 Score=55.00 Aligned_cols=76 Identities=18% Similarity=0.198 Sum_probs=52.1
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccC---------------
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDL--------------- 67 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl--------------- 67 (335)
..++|+|+|+ |-+|..+++.+...|.+|++++|++.......+ + +..++..|+
T Consensus 183 ~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~-l----------Ga~~~~l~~~~~~~~gya~~~~~~ 250 (381)
T 3p2y_A 183 KPASALVLGV-GVAGLQALATAKRLGAKTTGYDVRPEVAEQVRS-V----------GAQWLDLGIDAAGEGGYARELSEA 250 (381)
T ss_dssp CCCEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHH-T----------TCEECCCC-------------CHH
T ss_pred CCCEEEEECc-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-c----------CCeEEeccccccccccchhhhhHH
Confidence 4578999998 999999999999999999999987654333221 1 122222111
Q ss_pred ---CCHHHHHHHHhcCCCCEEEEccccc
Q 019795 68 ---RNKDDLDKLFSSQKFEAVIHFGALK 92 (335)
Q Consensus 68 ---~d~~~~~~~~~~~~~d~vi~~a~~~ 92 (335)
.+.+.+.+++. ..|+||.++..+
T Consensus 251 ~~~~~~~~l~e~l~--~aDIVI~tv~iP 276 (381)
T 3p2y_A 251 ERAQQQQALEDAIT--KFDIVITTALVP 276 (381)
T ss_dssp HHHHHHHHHHHHHT--TCSEEEECCCCT
T ss_pred HHhhhHHHHHHHHh--cCCEEEECCCCC
Confidence 12345667777 889999876543
|
| >1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1 | Back alignment and structure |
|---|
Probab=96.39 E-value=0.0045 Score=56.46 Aligned_cols=72 Identities=22% Similarity=0.282 Sum_probs=50.0
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcC
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGF-KVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQ 80 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~ 80 (335)
+.+++|+|.|+ |.+|+.+++.|...|. +|++++|+..+.......+ +... .+ .+++.+++.
T Consensus 165 l~g~~VlIiGa-G~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~----------g~~~--~~---~~~l~~~l~-- 226 (404)
T 1gpj_A 165 LHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDL----------GGEA--VR---FDELVDHLA-- 226 (404)
T ss_dssp CTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHH----------TCEE--CC---GGGHHHHHH--
T ss_pred ccCCEEEEECh-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHc----------CCce--ec---HHhHHHHhc--
Confidence 46789999998 9999999999999998 8999988643322222211 1121 12 234666666
Q ss_pred CCCEEEEcccc
Q 019795 81 KFEAVIHFGAL 91 (335)
Q Consensus 81 ~~d~vi~~a~~ 91 (335)
++|+||.+.+.
T Consensus 227 ~aDvVi~at~~ 237 (404)
T 1gpj_A 227 RSDVVVSATAA 237 (404)
T ss_dssp TCSEEEECCSS
T ss_pred CCCEEEEccCC
Confidence 78999998764
|
| >1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A | Back alignment and structure |
|---|
Probab=96.39 E-value=0.0044 Score=55.54 Aligned_cols=74 Identities=18% Similarity=0.222 Sum_probs=50.1
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCH-HHHHHHHhcCC
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNK-DDLDKLFSSQK 81 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~-~~~~~~~~~~~ 81 (335)
.+.+|||+|+ |.+|..+++.+...|++|+++++++.+..... .+. .. .. .|..+. +..+++. .+
T Consensus 179 ~g~~VlV~Ga-G~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~-~lG--------a~-~v--~~~~~~~~~~~~~~--~~ 243 (360)
T 1piw_A 179 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAM-KMG--------AD-HY--IATLEEGDWGEKYF--DT 243 (360)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHH-HHT--------CS-EE--EEGGGTSCHHHHSC--SC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH-HcC--------CC-EE--EcCcCchHHHHHhh--cC
Confidence 4679999999 99999999998888999999998766543322 221 11 11 233333 2223332 37
Q ss_pred CCEEEEcccc
Q 019795 82 FEAVIHFGAL 91 (335)
Q Consensus 82 ~d~vi~~a~~ 91 (335)
+|+||.+++.
T Consensus 244 ~D~vid~~g~ 253 (360)
T 1piw_A 244 FDLIVVCASS 253 (360)
T ss_dssp EEEEEECCSC
T ss_pred CCEEEECCCC
Confidence 9999999875
|
| >1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=96.38 E-value=0.0048 Score=55.30 Aligned_cols=76 Identities=17% Similarity=0.203 Sum_probs=50.6
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhC-CCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCH--HHHHHHHhc
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQG-GFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNK--DDLDKLFSS 79 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~--~~~~~~~~~ 79 (335)
.+.+|||+|+ |.+|..+++.+... |++|+++++++.+.+ .+.++. .. ...|..++ +.+.++...
T Consensus 186 ~g~~VlV~Ga-G~vG~~avqlak~~~Ga~Vi~~~~~~~~~~----~~~~lG-------a~-~vi~~~~~~~~~v~~~~~g 252 (359)
T 1h2b_A 186 PGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLK----LAERLG-------AD-HVVDARRDPVKQVMELTRG 252 (359)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHH----HHHHTT-------CS-EEEETTSCHHHHHHHHTTT
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHH----HHHHhC-------CC-EEEeccchHHHHHHHHhCC
Confidence 4678999999 89999999999888 999999987543322 222221 11 11344443 344454433
Q ss_pred CCCCEEEEcccc
Q 019795 80 QKFEAVIHFGAL 91 (335)
Q Consensus 80 ~~~d~vi~~a~~ 91 (335)
.++|+||.+++.
T Consensus 253 ~g~Dvvid~~G~ 264 (359)
T 1h2b_A 253 RGVNVAMDFVGS 264 (359)
T ss_dssp CCEEEEEESSCC
T ss_pred CCCcEEEECCCC
Confidence 379999999875
|
| >3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae} | Back alignment and structure |
|---|
Probab=96.38 E-value=0.02 Score=52.87 Aligned_cols=76 Identities=18% Similarity=0.165 Sum_probs=52.9
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCC
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQK 81 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~ 81 (335)
+++|+|+|.|. |..|..+++.|.++|++|.+.++.........+.+.+ .++.+..+.-.+ ++++ .
T Consensus 7 ~~~k~v~viG~-G~sG~s~A~~l~~~G~~V~~~D~~~~~~~~~~~~L~~-------~gi~~~~g~~~~-----~~~~--~ 71 (451)
T 3lk7_A 7 FENKKVLVLGL-ARSGEAAARLLAKLGAIVTVNDGKPFDENPTAQSLLE-------EGIKVVCGSHPL-----ELLD--E 71 (451)
T ss_dssp TTTCEEEEECC-TTTHHHHHHHHHHTTCEEEEEESSCGGGCHHHHHHHH-------TTCEEEESCCCG-----GGGG--S
T ss_pred cCCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEeCCcccCChHHHHHHh-------CCCEEEECCChH-----Hhhc--C
Confidence 35689999999 8899999999999999999999865322233334433 356665543321 2333 4
Q ss_pred -CCEEEEccccc
Q 019795 82 -FEAVIHFGALK 92 (335)
Q Consensus 82 -~d~vi~~a~~~ 92 (335)
+|.||...|++
T Consensus 72 ~~d~vv~spgi~ 83 (451)
T 3lk7_A 72 DFCYMIKNPGIP 83 (451)
T ss_dssp CEEEEEECTTSC
T ss_pred CCCEEEECCcCC
Confidence 89999887774
|
| >2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix} | Back alignment and structure |
|---|
Probab=96.37 E-value=0.022 Score=49.79 Aligned_cols=114 Identities=14% Similarity=0.185 Sum_probs=74.4
Q ss_pred eEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCCchhhHHhhhhhcCCccccceeEEE-ccCCCHHHHHHHHhcCCCC
Q 019795 6 NILVTGGAGFIGTHCALQLLQGGF-KVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHV-GDLRNKDDLDKLFSSQKFE 83 (335)
Q Consensus 6 ~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~-~Dl~d~~~~~~~~~~~~~d 83 (335)
+|.|+|| |.+|..++..|+..|. +|+++++++........++.+.... ......+.. .| . +.++ +.|
T Consensus 1 KI~IiGa-G~vG~~~a~~l~~~~l~el~L~Di~~~~~~g~~~dl~~~~~~-~~~~~~i~~t~d---~----~a~~--~aD 69 (308)
T 2d4a_B 1 MITILGA-GKVGMATAVMLMMRGYDDLLLIARTPGKPQGEALDLAHAAAE-LGVDIRISGSNS---Y----EDMR--GSD 69 (308)
T ss_dssp CEEEECC-SHHHHHHHHHHHHHTCSCEEEECSSTTHHHHHHHHHHHHHHH-HTCCCCEEEESC---G----GGGT--TCS
T ss_pred CEEEECc-CHHHHHHHHHHHhCCCCEEEEEcCChhhHHHHHHHHHHhhhh-cCCCeEEEECCC---H----HHhC--CCC
Confidence 5889998 9999999999988887 7999999765554434444332100 001222332 23 1 2455 789
Q ss_pred EEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCC-EEEEecc
Q 019795 84 AVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCK-KLVFSSS 132 (335)
Q Consensus 84 ~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~-~~v~~Ss 132 (335)
+||-+++.+... ...-..+...|+.....+++.+.+.... .+|.+|.
T Consensus 70 ~Vi~~ag~~~k~--G~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tN 117 (308)
T 2d4a_B 70 IVLVTAGIGRKP--GMTREQLLEANANTMADLAEKIKAYAKDAIVVITTN 117 (308)
T ss_dssp EEEECCSCCCCS--SCCTHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCS
T ss_pred EEEEeCCCCCCC--CCcHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCC
Confidence 999999875422 2233466778999999999998876543 5566554
|
| >3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri} | Back alignment and structure |
|---|
Probab=96.37 E-value=0.0029 Score=55.15 Aligned_cols=37 Identities=30% Similarity=0.402 Sum_probs=31.0
Q ss_pred CCCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCC
Q 019795 1 MASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLH 38 (335)
Q Consensus 1 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~ 38 (335)
|.++++|.|.|+ |.+|+.+++.|.+.|++|++.+|++
T Consensus 1 M~~~~~i~iiG~-G~~G~~~a~~l~~~g~~V~~~~~~~ 37 (301)
T 3cky_A 1 MEKSIKIGFIGL-GAMGKPMAINLLKEGVTVYAFDLME 37 (301)
T ss_dssp ---CCEEEEECC-CTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCCCCEEEEECc-cHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 677789999995 9999999999999999999988754
|
| >3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=96.36 E-value=0.007 Score=52.57 Aligned_cols=71 Identities=17% Similarity=0.161 Sum_probs=49.8
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCC
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQK 81 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~ 81 (335)
+.+++|+|.|+ |.+|+.+++.|...|++|++.+|+..+.. .+.+ .++..+ +.+++.+++. .
T Consensus 153 l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~dr~~~~~~----~~~~-------~g~~~~-----~~~~l~~~l~--~ 213 (293)
T 3d4o_A 153 IHGANVAVLGL-GRVGMSVARKFAALGAKVKVGARESDLLA----RIAE-------MGMEPF-----HISKAAQELR--D 213 (293)
T ss_dssp STTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHH----HHHH-------TTSEEE-----EGGGHHHHTT--T
T ss_pred CCCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEECCHHHHH----HHHH-------CCCeec-----ChhhHHHHhc--C
Confidence 46799999996 99999999999999999999998643211 1111 122222 1235667776 7
Q ss_pred CCEEEEcccc
Q 019795 82 FEAVIHFGAL 91 (335)
Q Consensus 82 ~d~vi~~a~~ 91 (335)
.|+|+.+...
T Consensus 214 aDvVi~~~p~ 223 (293)
T 3d4o_A 214 VDVCINTIPA 223 (293)
T ss_dssp CSEEEECCSS
T ss_pred CCEEEECCCh
Confidence 8999987643
|
| >1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=96.35 E-value=0.0072 Score=54.38 Aligned_cols=74 Identities=23% Similarity=0.239 Sum_probs=51.0
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCC
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKF 82 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~ 82 (335)
.+.+|||+|+ |.+|..+++.+...|++|+++++++...... .++. .. ...|..+.+.+.++. .++
T Consensus 194 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a----~~lG-------a~-~vi~~~~~~~~~~~~--~g~ 258 (369)
T 1uuf_A 194 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAA----KALG-------AD-EVVNSRNADEMAAHL--KSF 258 (369)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHH----HHHT-------CS-EEEETTCHHHHHTTT--TCE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH----HHcC-------Cc-EEeccccHHHHHHhh--cCC
Confidence 4678999998 8899999999988999999999865543322 1111 11 123555555444443 379
Q ss_pred CEEEEcccc
Q 019795 83 EAVIHFGAL 91 (335)
Q Consensus 83 d~vi~~a~~ 91 (335)
|+||.+++.
T Consensus 259 Dvvid~~g~ 267 (369)
T 1uuf_A 259 DFILNTVAA 267 (369)
T ss_dssp EEEEECCSS
T ss_pred CEEEECCCC
Confidence 999998875
|
| >3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021} | Back alignment and structure |
|---|
Probab=96.34 E-value=0.0081 Score=53.87 Aligned_cols=78 Identities=9% Similarity=0.056 Sum_probs=51.1
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCC-HHHHHHHHhcCC
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRN-KDDLDKLFSSQK 81 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d-~~~~~~~~~~~~ 81 (335)
.+.+|||+| +|.+|..+++.+...|++|+++++++.+.+. +.++. . -..+.-+-.+ .+.+.++....+
T Consensus 189 ~g~~VlV~G-~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~----~~~lG-----a-~~vi~~~~~~~~~~v~~~~~g~g 257 (363)
T 3uog_A 189 AGDRVVVQG-TGGVALFGLQIAKATGAEVIVTSSSREKLDR----AFALG-----A-DHGINRLEEDWVERVYALTGDRG 257 (363)
T ss_dssp TTCEEEEES-SBHHHHHHHHHHHHTTCEEEEEESCHHHHHH----HHHHT-----C-SEEEETTTSCHHHHHHHHHTTCC
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEecCchhHHH----HHHcC-----C-CEEEcCCcccHHHHHHHHhCCCC
Confidence 467899999 7999999999999999999999876443222 22221 1 1122211112 234555555458
Q ss_pred CCEEEEcccc
Q 019795 82 FEAVIHFGAL 91 (335)
Q Consensus 82 ~d~vi~~a~~ 91 (335)
+|+||.+++.
T Consensus 258 ~D~vid~~g~ 267 (363)
T 3uog_A 258 ADHILEIAGG 267 (363)
T ss_dssp EEEEEEETTS
T ss_pred ceEEEECCCh
Confidence 9999999883
|
| >1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A* | Back alignment and structure |
|---|
Probab=96.34 E-value=0.014 Score=52.65 Aligned_cols=72 Identities=18% Similarity=0.317 Sum_probs=54.5
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCC
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKF 82 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~ 82 (335)
++|+|+|+|+ |.+|..+++.+.+.|++|++++..+..... .+ .-..+..|..|.+.+.+++++.++
T Consensus 10 ~~~~ili~g~-g~~~~~~~~a~~~~G~~v~~~~~~~~~~~~---~~----------~d~~~~~~~~d~~~l~~~~~~~~~ 75 (391)
T 1kjq_A 10 AATRVMLLGS-GELGKEVAIECQRLGVEVIAVDRYADAPAM---HV----------AHRSHVINMLDGDALRRVVELEKP 75 (391)
T ss_dssp TCCEEEEESC-SHHHHHHHHHHHTTTCEEEEEESSTTCGGG---GG----------SSEEEECCTTCHHHHHHHHHHHCC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEECCCCCchh---hh----------ccceEECCCCCHHHHHHHHHHcCC
Confidence 4579999987 789999999999999999999876543211 00 113456788888888888876789
Q ss_pred CEEEEc
Q 019795 83 EAVIHF 88 (335)
Q Consensus 83 d~vi~~ 88 (335)
|+|+..
T Consensus 76 d~v~~~ 81 (391)
T 1kjq_A 76 HYIVPE 81 (391)
T ss_dssp SEEEEC
T ss_pred CEEEEC
Confidence 999863
|
| >2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=96.31 E-value=0.0078 Score=52.45 Aligned_cols=71 Identities=17% Similarity=0.132 Sum_probs=50.0
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCC
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQK 81 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~ 81 (335)
+.+++|+|.|+ |.+|+.+++.|...|++|++.+|+..+. ..+.+ .++..+. ..++.+++. .
T Consensus 155 l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~d~~~~~~----~~~~~-------~g~~~~~-----~~~l~~~l~--~ 215 (300)
T 2rir_A 155 IHGSQVAVLGL-GRTGMTIARTFAALGANVKVGARSSAHL----ARITE-------MGLVPFH-----TDELKEHVK--D 215 (300)
T ss_dssp STTSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHH----HHHHH-------TTCEEEE-----GGGHHHHST--T
T ss_pred CCCCEEEEEcc-cHHHHHHHHHHHHCCCEEEEEECCHHHH----HHHHH-------CCCeEEc-----hhhHHHHhh--C
Confidence 45789999997 9999999999999999999999864321 11111 1222221 234667776 7
Q ss_pred CCEEEEcccc
Q 019795 82 FEAVIHFGAL 91 (335)
Q Consensus 82 ~d~vi~~a~~ 91 (335)
.|+|+.+...
T Consensus 216 aDvVi~~~p~ 225 (300)
T 2rir_A 216 IDICINTIPS 225 (300)
T ss_dssp CSEEEECCSS
T ss_pred CCEEEECCCh
Confidence 8999987664
|
| >4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=96.31 E-value=0.014 Score=52.84 Aligned_cols=76 Identities=16% Similarity=0.184 Sum_probs=52.6
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEcc----------------
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGD---------------- 66 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D---------------- 66 (335)
...+|+|+|+ |-+|...++.+...|.+|+++++++.......+ + +..++..+
T Consensus 189 ~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~-~----------G~~~~~~~~~~~~d~~~~~~ya~e 256 (405)
T 4dio_A 189 PAAKIFVMGA-GVAGLQAIATARRLGAVVSATDVRPAAKEQVAS-L----------GAKFIAVEDEEFKAAETAGGYAKE 256 (405)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSTTHHHHHHH-T----------TCEECCCCC---------------
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH-c----------CCceeecccccccccccccchhhh
Confidence 3578999998 999999999999999999999987654332221 1 11122111
Q ss_pred CCCH------HHHHHHHhcCCCCEEEEccccc
Q 019795 67 LRNK------DDLDKLFSSQKFEAVIHFGALK 92 (335)
Q Consensus 67 l~d~------~~~~~~~~~~~~d~vi~~a~~~ 92 (335)
++++ ..+.+++. +.|+||.++..+
T Consensus 257 ~s~~~~~~~~~~l~e~l~--~aDVVI~tvlip 286 (405)
T 4dio_A 257 MSGEYQVKQAALVAEHIA--KQDIVITTALIP 286 (405)
T ss_dssp --CHHHHHHHHHHHHHHH--TCSEEEECCCCS
T ss_pred cchhhhhhhHhHHHHHhc--CCCEEEECCcCC
Confidence 2332 46778887 889999987654
|
| >1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A* | Back alignment and structure |
|---|
Probab=96.31 E-value=0.014 Score=52.69 Aligned_cols=39 Identities=21% Similarity=0.176 Sum_probs=34.1
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCch
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVP 42 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~ 42 (335)
.+++|+|+|+ |.+|..+++.+...|.+|+++++++....
T Consensus 171 ~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~~~d~~~~~~~ 209 (384)
T 1l7d_A 171 PPARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKE 209 (384)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHH
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 4689999996 99999999999999999999998766543
|
| >3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1} | Back alignment and structure |
|---|
Probab=96.28 E-value=0.0066 Score=56.38 Aligned_cols=46 Identities=24% Similarity=0.315 Sum_probs=37.1
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhC-CC-eEEEEecCCCCchhhHHhh
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQG-GF-KVVLIDNLHNSVPEAVDRV 48 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~-g~-~V~~~~r~~~~~~~~~~~~ 48 (335)
+++|+|.|.|+ |++|..++..|++. |+ +|+++++++.+.....+.+
T Consensus 16 ~~~mkIaVIGl-G~mG~~lA~~la~~~G~~~V~~~D~~~~~~~~kv~~l 63 (478)
T 3g79_A 16 GPIKKIGVLGM-GYVGIPAAVLFADAPCFEKVLGFQRNSKSSGYKIEML 63 (478)
T ss_dssp CSCCEEEEECC-STTHHHHHHHHHHSTTCCEEEEECCCCTTTTTHHHHH
T ss_pred CCCCEEEEECc-CHHHHHHHHHHHHhCCCCeEEEEECChhHhHHHHHHH
Confidence 45789999996 99999999999999 99 9999999877333333333
|
| >3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=96.28 E-value=0.0044 Score=54.58 Aligned_cols=74 Identities=22% Similarity=0.209 Sum_probs=50.3
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCC
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKF 82 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~ 82 (335)
.+.+|+|+||+|.+|...++.+...|.+|+++++.. + .+.+.++. .. ...|..+.+.+.+.+. ++
T Consensus 152 ~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~~~-~----~~~~~~lG-------a~-~~i~~~~~~~~~~~~~--g~ 216 (321)
T 3tqh_A 152 QGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTASKR-N----HAFLKALG-------AE-QCINYHEEDFLLAIST--PV 216 (321)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEECHH-H----HHHHHHHT-------CS-EEEETTTSCHHHHCCS--CE
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEeccc-h----HHHHHHcC-------CC-EEEeCCCcchhhhhcc--CC
Confidence 467999999999999999999999999999887421 1 22222221 11 1234444443555554 89
Q ss_pred CEEEEcccc
Q 019795 83 EAVIHFGAL 91 (335)
Q Consensus 83 d~vi~~a~~ 91 (335)
|+||.+.+.
T Consensus 217 D~v~d~~g~ 225 (321)
T 3tqh_A 217 DAVIDLVGG 225 (321)
T ss_dssp EEEEESSCH
T ss_pred CEEEECCCc
Confidence 999998774
|
| >1s6y_A 6-phospho-beta-glucosidase; hydrolase, structural genomics, PSI, protein structure initi midwest center for structural genomics; 2.31A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.2 | Back alignment and structure |
|---|
Probab=96.27 E-value=0.017 Score=53.21 Aligned_cols=121 Identities=10% Similarity=0.009 Sum_probs=71.1
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhC-----CCeEEEEecCC--CCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHH
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQG-----GFKVVLIDNLH--NSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKL 76 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~-----g~~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~ 76 (335)
.++|.|.||++..|..|+..|+.+ +.+|+++++++ .......+ +.+...+.......+... .+..++
T Consensus 7 ~~KIaVIGaGsv~~~al~~~L~~~~~~l~~~ev~L~Di~~~~e~~~~~~~-~~~~~~~~~~~~~~i~~t-----~D~~ea 80 (450)
T 1s6y_A 7 RLKIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEGKEKLEIVGA-LAKRMVEKAGVPIEIHLT-----LDRRRA 80 (450)
T ss_dssp CEEEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGHHHHHHHHH-HHHHHHHHTTCCCEEEEE-----SCHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCCCCCCEEEEEEcCCChHHHHHHHH-HHHHHHhhcCCCcEEEEe-----CCHHHH
Confidence 468999999777799999999884 57899999976 44333221 111110000112222221 234556
Q ss_pred HhcCCCCEEEEcccccchhhhhcChH------------------HHHHHhHHHHHHHHHHHHHcCCC-EEEEecc
Q 019795 77 FSSQKFEAVIHFGALKAVAESVQHPF------------------RYFDNNLIGTINLYQAMAKYNCK-KLVFSSS 132 (335)
Q Consensus 77 ~~~~~~d~vi~~a~~~~~~~~~~~~~------------------~~~~~nv~~~~~l~~~~~~~~~~-~~v~~Ss 132 (335)
++ +.|+||..++.........+.. ....-|+.....+++.+++.+.+ .++.+|-
T Consensus 81 l~--gAD~VVitagv~~~~~~~rd~~ip~~~g~~~~et~G~ggi~~~~rni~i~~~i~~~i~~~~P~a~ii~~tN 153 (450)
T 1s6y_A 81 LD--GADFVTTQFRVGGLEARAKDERIPLKYGVIGQETNGPGGLFKGLRTIPVILDIIRDMEELCPDAWLINFTN 153 (450)
T ss_dssp HT--TCSEEEECCCTTHHHHHHHHHHTGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSS
T ss_pred hC--CCCEEEEcCCCCCCcchhhhhhhhhhcCcccccccccchHHHHhhhHHHHHHHHHHHHHHCCCeEEEEeCC
Confidence 76 7899999998754322111100 12445777788888888887654 4445444
|
| >3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=96.26 E-value=0.0062 Score=54.24 Aligned_cols=70 Identities=14% Similarity=0.151 Sum_probs=48.6
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCC
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKF 82 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~ 82 (335)
.+.+|||+|+ |.+|...++.+...|.+|+++++++.+.+.. .++ . .. ..+ .+.+.+ .+ ++
T Consensus 176 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~-~~l---G-----a~-~v~----~~~~~~----~~-~~ 235 (348)
T 3two_A 176 KGTKVGVAGF-GGLGSMAVKYAVAMGAEVSVFARNEHKKQDA-LSM---G-----VK-HFY----TDPKQC----KE-EL 235 (348)
T ss_dssp TTCEEEEESC-SHHHHHHHHHHHHTTCEEEEECSSSTTHHHH-HHT---T-----CS-EEE----SSGGGC----CS-CE
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHH-Hhc---C-----CC-eec----CCHHHH----hc-CC
Confidence 4679999997 9999999999998999999999876654432 222 1 11 122 333322 21 79
Q ss_pred CEEEEccccc
Q 019795 83 EAVIHFGALK 92 (335)
Q Consensus 83 d~vi~~a~~~ 92 (335)
|+||.+++..
T Consensus 236 D~vid~~g~~ 245 (348)
T 3two_A 236 DFIISTIPTH 245 (348)
T ss_dssp EEEEECCCSC
T ss_pred CEEEECCCcH
Confidence 9999988764
|
| >1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A* | Back alignment and structure |
|---|
Probab=96.21 E-value=0.0067 Score=53.04 Aligned_cols=81 Identities=17% Similarity=0.033 Sum_probs=53.9
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccce-eEEEccCCCHHHHHHHHhcC
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKL-EFHVGDLRNKDDLDKLFSSQ 80 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i-~~~~~Dl~d~~~~~~~~~~~ 80 (335)
+.+++|+|.|++..+|+.+++.|+..|..|++++|+..........+. ... .......++++++.+.+.
T Consensus 175 l~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~~~l~~ra~~la--------~~~~~~t~~~~t~~~~L~e~l~-- 244 (320)
T 1edz_A 175 LYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLK--------LNKHHVEDLGEYSEDLLKKCSL-- 244 (320)
T ss_dssp TTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSS--------CCCCEEEEEEECCHHHHHHHHH--
T ss_pred CCCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCchHHHHhHHHHHh--------hhcccccccccccHhHHHHHhc--
Confidence 357899999998899999999999999999999886332211111111 100 011111134577888888
Q ss_pred CCCEEEEccccc
Q 019795 81 KFEAVIHFGALK 92 (335)
Q Consensus 81 ~~d~vi~~a~~~ 92 (335)
..|+||.+.+..
T Consensus 245 ~ADIVIsAtg~p 256 (320)
T 1edz_A 245 DSDVVITGVPSE 256 (320)
T ss_dssp HCSEEEECCCCT
T ss_pred cCCEEEECCCCC
Confidence 679999887764
|
| >1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A | Back alignment and structure |
|---|
Probab=96.21 E-value=0.0053 Score=54.96 Aligned_cols=81 Identities=9% Similarity=0.157 Sum_probs=49.5
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCC--HHHHHHHHhcC
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRN--KDDLDKLFSSQ 80 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d--~~~~~~~~~~~ 80 (335)
.+.+|||+||+|.+|..+++.+...|++|+++.++.....+..+.++++.. . ..+ |..+ .+++.++....
T Consensus 167 ~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa----~--~vi--~~~~~~~~~~~~~~~~~ 238 (357)
T 1zsy_A 167 PGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLKSLGA----E--HVI--TEEELRRPEMKNFFKDM 238 (357)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCSCHHHHHHHHHHTTC----S--EEE--EHHHHHSGGGGGTTSSS
T ss_pred CCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCccchHHHHHHHHhcCC----c--EEE--ecCcchHHHHHHHHhCC
Confidence 467899999999999999998888899988887654433222222322211 1 112 2111 12333333322
Q ss_pred -CCCEEEEcccc
Q 019795 81 -KFEAVIHFGAL 91 (335)
Q Consensus 81 -~~d~vi~~a~~ 91 (335)
++|+||.+.+.
T Consensus 239 ~~~Dvvid~~g~ 250 (357)
T 1zsy_A 239 PQPRLALNCVGG 250 (357)
T ss_dssp CCCSEEEESSCH
T ss_pred CCceEEEECCCc
Confidence 58999998764
|
| >2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A* | Back alignment and structure |
|---|
Probab=96.20 E-value=0.0066 Score=53.98 Aligned_cols=74 Identities=18% Similarity=0.292 Sum_probs=48.8
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCH---HHHHHHHh
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGF-KVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNK---DDLDKLFS 78 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~---~~~~~~~~ 78 (335)
.+.+|||+|+ |.+|..+++.+...|+ +|+++++++.+.. .+.+. . . ...|..++ +.+.++.
T Consensus 164 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~----~~~~l-a----~----~v~~~~~~~~~~~~~~~~- 228 (343)
T 2dq4_A 164 SGKSVLITGA-GPIGLMAAMVVRASGAGPILVSDPNPYRLA----FARPY-A----D----RLVNPLEEDLLEVVRRVT- 228 (343)
T ss_dssp TTSCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHG----GGTTT-C----S----EEECTTTSCHHHHHHHHH-
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHH----HHHHh-H----H----hccCcCccCHHHHHHHhc-
Confidence 4678999999 9999999999988999 8999987543221 11111 0 1 12343332 2344433
Q ss_pred cCCCCEEEEcccc
Q 019795 79 SQKFEAVIHFGAL 91 (335)
Q Consensus 79 ~~~~d~vi~~a~~ 91 (335)
..++|+||.+++.
T Consensus 229 ~~g~D~vid~~g~ 241 (343)
T 2dq4_A 229 GSGVEVLLEFSGN 241 (343)
T ss_dssp SSCEEEEEECSCC
T ss_pred CCCCCEEEECCCC
Confidence 3479999998875
|
| >3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A* | Back alignment and structure |
|---|
Probab=96.20 E-value=0.031 Score=50.17 Aligned_cols=75 Identities=16% Similarity=0.114 Sum_probs=48.8
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCH---HHHHHHHhc
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNK---DDLDKLFSS 79 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~---~~~~~~~~~ 79 (335)
.+.+|||+||+|.+|...++.+...|++|+++. ++.+ .+.++++. . -.. .|..++ +.+.++..
T Consensus 164 ~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~----~~~~~~lG-----a-~~v--i~~~~~~~~~~v~~~t~- 229 (371)
T 3gqv_A 164 KPVYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPHN----FDLAKSRG-----A-EEV--FDYRAPNLAQTIRTYTK- 229 (371)
T ss_dssp SCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGGG----HHHHHHTT-----C-SEE--EETTSTTHHHHHHHHTT-
T ss_pred CCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHHH----HHHHHHcC-----C-cEE--EECCCchHHHHHHHHcc-
Confidence 467899999999999999999999999998886 3322 12222221 1 112 233333 33444433
Q ss_pred CCCCEEEEcccc
Q 019795 80 QKFEAVIHFGAL 91 (335)
Q Consensus 80 ~~~d~vi~~a~~ 91 (335)
.++|+||.+.+.
T Consensus 230 g~~d~v~d~~g~ 241 (371)
T 3gqv_A 230 NNLRYALDCITN 241 (371)
T ss_dssp TCCCEEEESSCS
T ss_pred CCccEEEECCCc
Confidence 359999998875
|
| >1obb_A Maltase, alpha-glucosidase; glycosidase, sulfinic acid, NAD+, maltose, hydrolase; HET: MAL NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2 | Back alignment and structure |
|---|
Probab=96.20 E-value=0.0056 Score=56.80 Aligned_cols=120 Identities=15% Similarity=0.090 Sum_probs=69.4
Q ss_pred CCCeEEEEcCCC-hhhHHHHHHHHhC----CCeEEEEecCCCCchhhHHhhhhhc-CCccccceeEEEccCCCHHHHHHH
Q 019795 3 SEKNILVTGGAG-FIGTHCALQLLQG----GFKVVLIDNLHNSVPEAVDRVKDLA-GPELAKKLEFHVGDLRNKDDLDKL 76 (335)
Q Consensus 3 ~~~~vlItGatG-~iG~~l~~~L~~~----g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~Dl~d~~~~~~~ 76 (335)
++++|.|.||++ +.|.+|+..|++. |.+|+++++++.......+...... ....+.++.. . .++.++
T Consensus 2 ~~~KIaVIGAGsVg~g~ala~~La~~~~l~~~eV~L~Di~~e~l~~~~~~~~~~l~~~~~~~~I~~--t-----tD~~ea 74 (480)
T 1obb_A 2 PSVKIGIIGAGSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKFEK--T-----MNLDDV 74 (480)
T ss_dssp CCCEEEEETTTCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCEEEE--E-----SCHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHhcCcCCCCEEEEEeCCHHHHHHHHHHHHHHhccCCCCcEEEE--E-----CCHHHH
Confidence 467899999966 5688888888864 8999999997654433322222111 0001122221 1 234455
Q ss_pred HhcCCCCEEEEcccccchhhhh------------cChHH------------HHHHhHHHHHHHHHHHHHcCCCEEEEec
Q 019795 77 FSSQKFEAVIHFGALKAVAESV------------QHPFR------------YFDNNLIGTINLYQAMAKYNCKKLVFSS 131 (335)
Q Consensus 77 ~~~~~~d~vi~~a~~~~~~~~~------------~~~~~------------~~~~nv~~~~~l~~~~~~~~~~~~v~~S 131 (335)
++ +.|+||-+++........ ....+ ....|+.....+++.+.+.+...++...
T Consensus 75 l~--dAD~VIiaagv~~~~~~~~dE~ip~K~g~~~~l~dt~g~g~~~~G~~~~~rni~i~~~i~~~i~~~~P~A~ii~~ 151 (480)
T 1obb_A 75 II--DADFVINTAMVGGHTYLEKVRQIGEKYGYYRGIDAQEFNMVSDYYTFSNYNQLKYFVDIARKIEKLSPKAWYLQA 151 (480)
T ss_dssp HT--TCSEEEECCCTTHHHHHHHHHHHHHHTTCTTCTTCBTTBCCTTCCSSSCHHHHHHHHHHHHHHHHHCTTCEEEEC
T ss_pred hC--CCCEEEECCCcccccccccccccccccccccchhhhcCCccchhhhHHhhhhHHHHHHHHHHHHHHCCCeEEEEe
Confidence 66 789999998763321110 00001 1335777788888888888655444433
|
| >3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis} | Back alignment and structure |
|---|
Probab=96.20 E-value=0.011 Score=50.67 Aligned_cols=57 Identities=18% Similarity=0.193 Sum_probs=45.5
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCC
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQK 81 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~ 81 (335)
+.+|+++|.|+++.+|+.++..|+..|..|+++.+.. .++.+.+. .
T Consensus 159 l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t--------------------------------~~L~~~~~--~ 204 (285)
T 3l07_A 159 TEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFT--------------------------------TDLKSHTT--K 204 (285)
T ss_dssp CTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC--------------------------------SSHHHHHT--T
T ss_pred CCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCc--------------------------------hhHHHhcc--c
Confidence 4689999999999999999999999999998875421 12445666 6
Q ss_pred CCEEEEccccc
Q 019795 82 FEAVIHFGALK 92 (335)
Q Consensus 82 ~d~vi~~a~~~ 92 (335)
.|+||.+.+..
T Consensus 205 ADIVI~Avg~p 215 (285)
T 3l07_A 205 ADILIVAVGKP 215 (285)
T ss_dssp CSEEEECCCCT
T ss_pred CCEEEECCCCC
Confidence 79999987754
|
| >2dwc_A PH0318, 433AA long hypothetical phosphoribosylglycinamide transferase; purine ribonucleotide biosynthesis; HET: ADP; 1.70A {Pyrococcus horikoshii} PDB: 2czg_A* | Back alignment and structure |
|---|
Probab=96.19 E-value=0.016 Score=53.28 Aligned_cols=73 Identities=27% Similarity=0.340 Sum_probs=55.2
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCCC
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKFE 83 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~d 83 (335)
+|+|+|+|+ |.+|+.+++.+.+.|++|++++..+..... .+ .-..+..|..|.+.+.++++..++|
T Consensus 19 ~~~ili~g~-g~~g~~~~~a~~~~G~~v~~v~~~~~~~~~---~~----------ad~~~~~~~~d~~~l~~~~~~~~~d 84 (433)
T 2dwc_A 19 AQKILLLGS-GELGKEIAIEAQRLGVEVVAVDRYANAPAM---QV----------AHRSYVGNMMDKDFLWSVVEREKPD 84 (433)
T ss_dssp CCEEEEESC-SHHHHHHHHHHHHTTCEEEEEESSTTCHHH---HH----------SSEEEESCTTCHHHHHHHHHHHCCS
T ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECCCCChhh---hh----------cceEEECCCCCHHHHHHHHHHcCCC
Confidence 468999997 789999999999999999999876543211 11 0134667888988888888766899
Q ss_pred EEEEccc
Q 019795 84 AVIHFGA 90 (335)
Q Consensus 84 ~vi~~a~ 90 (335)
+|+....
T Consensus 85 ~V~~~~e 91 (433)
T 2dwc_A 85 AIIPEIE 91 (433)
T ss_dssp EEEECSS
T ss_pred EEEECcc
Confidence 9986443
|
| >3ouz_A Biotin carboxylase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta fold, cytosol, LIG; HET: MSE ADP SRT TLA; 1.90A {Campylobacter jejuni subsp} PDB: 3ouu_A* | Back alignment and structure |
|---|
Probab=96.18 E-value=0.0079 Score=55.54 Aligned_cols=76 Identities=12% Similarity=0.027 Sum_probs=50.8
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEE-----ccCCCHHHHHHH
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHV-----GDLRNKDDLDKL 76 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~-----~Dl~d~~~~~~~ 76 (335)
||+|+|||+|+ |.+|..+++.+.+.|+++++++.......... ++. +....+. .+..|.+.+.++
T Consensus 4 m~~~kiLI~g~-g~~a~~i~~aa~~~G~~~v~v~~~~~~~~~~~-~~a--------d~~~~i~~~~~~~~~~d~~~l~~~ 73 (446)
T 3ouz_A 4 MEIKSILIANR-GEIALRALRTIKEMGKKAICVYSEADKDALYL-KYA--------DASICIGKARSSESYLNIPAIIAA 73 (446)
T ss_dssp TCCCEEEECCC-HHHHHHHHHHHHHTTCEEEEEEEGGGTTCTHH-HHS--------SEEEEEECCTTTTGGGCHHHHHHH
T ss_pred cccceEEEECC-CHHHHHHHHHHHHcCCEEEEEEcCcccccchH-hhC--------CEEEEcCCCCccccccCHHHHHHH
Confidence 56889999996 88999999999999999999864332211111 111 1111121 155677788888
Q ss_pred HhcCCCCEEEE
Q 019795 77 FSSQKFEAVIH 87 (335)
Q Consensus 77 ~~~~~~d~vi~ 87 (335)
.+..++|+|+-
T Consensus 74 ~~~~~~d~i~p 84 (446)
T 3ouz_A 74 AEIAEADAIFP 84 (446)
T ss_dssp HHHHTCSEEEC
T ss_pred HHHhCcCEEEE
Confidence 87778998874
|
| >4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major} | Back alignment and structure |
|---|
Probab=96.17 E-value=0.013 Score=50.61 Aligned_cols=35 Identities=20% Similarity=0.377 Sum_probs=32.3
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEec
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDN 36 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r 36 (335)
+.+|+++|.|+++.+|+.++..|++.|+.|+++.+
T Consensus 163 l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~ 197 (300)
T 4a26_A 163 MAGKRAVVLGRSNIVGAPVAALLMKENATVTIVHS 197 (300)
T ss_dssp CTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECT
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeC
Confidence 46899999999999999999999999999998865
|
| >3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP} | Back alignment and structure |
|---|
Probab=96.17 E-value=0.0034 Score=54.30 Aligned_cols=36 Identities=14% Similarity=0.310 Sum_probs=32.4
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCC
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHN 39 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 39 (335)
||+|.|.|+||.+|+.+++.|.+.|++|++.+|++.
T Consensus 11 mm~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~ 46 (286)
T 3c24_A 11 PKTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPE 46 (286)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHH
Confidence 469999999999999999999999999999988543
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 335 | ||||
| d1udca_ | 338 | c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras | 1e-94 | |
| d1z45a2 | 347 | c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-ep | 2e-84 | |
| d1ek6a_ | 346 | c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras | 1e-82 | |
| d2b69a1 | 312 | c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 | 1e-80 | |
| d1kewa_ | 361 | c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) { | 2e-75 | |
| d1db3a_ | 357 | c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric | 5e-75 | |
| d1r6da_ | 322 | c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) { | 2e-66 | |
| d1sb8a_ | 341 | c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase W | 2e-64 | |
| d1t2aa_ | 347 | c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (H | 1e-62 | |
| d1e6ua_ | 315 | c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimeras | 7e-60 | |
| d1gy8a_ | 383 | c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras | 7e-58 | |
| d1orra_ | 338 | c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella | 5e-53 | |
| d1rpna_ | 321 | c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomo | 4e-50 | |
| d1oc2a_ | 346 | c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) { | 2e-49 | |
| d2c5aa1 | 363 | c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {T | 7e-49 | |
| d1n7ha_ | 339 | c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cr | 5e-42 | |
| d1y1pa1 | 342 | c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolo | 3e-32 | |
| d1rkxa_ | 356 | c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia | 8e-31 | |
| d1i24a_ | 393 | c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 | 2e-28 | |
| d2blla1 | 342 | c.2.1.2 (A:316-657) Polymyxin resistance protein A | 1e-24 | |
| d1eq2a_ | 307 | c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimer | 9e-22 | |
| d1qyda_ | 312 | c.2.1.2 (A:) Pinoresinol-lariciresinol reductase { | 7e-17 | |
| d1qyca_ | 307 | c.2.1.2 (A:) Phenylcoumaran benzylic ether reducta | 5e-16 | |
| d1xgka_ | 350 | c.2.1.2 (A:) Negative transcriptional regulator Nm | 1e-15 | |
| d2q46a1 | 252 | c.2.1.2 (A:2-253) Hypothetical protein At5g02240 ( | 4e-15 | |
| d1n2sa_ | 298 | c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reduct | 1e-14 | |
| d1vl0a_ | 281 | c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD | 4e-14 | |
| d1yxma1 | 297 | c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA re | 1e-11 | |
| d2gdza1 | 254 | c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrog | 2e-11 | |
| d1xkqa_ | 272 | c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorh | 2e-11 | |
| d1hdoa_ | 205 | c.2.1.2 (A:) Biliverdin IX beta reductase {Human ( | 3e-11 | |
| d1spxa_ | 264 | c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nemato | 3e-11 | |
| d1xg5a_ | 257 | c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC41 | 4e-11 | |
| d1bdba_ | 276 | c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehy | 9e-11 | |
| d1xhla_ | 274 | c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorh | 9e-11 | |
| d2d1ya1 | 248 | c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {T | 2e-10 | |
| d1yb1a_ | 244 | c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase | 5e-10 | |
| d1cyda_ | 242 | c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus muscul | 9e-10 | |
| d2ew8a1 | 247 | c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenas | 9e-10 | |
| d1h5qa_ | 260 | c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Aga | 3e-09 | |
| d1hdca_ | 254 | c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydr | 3e-09 | |
| d1pr9a_ | 244 | c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapie | 3e-09 | |
| d2bgka1 | 268 | c.2.1.2 (A:11-278) Rhizome secoisolariciresinol de | 3e-09 | |
| d2ae2a_ | 259 | c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu | 6e-09 | |
| d1xq1a_ | 259 | c.2.1.2 (A:) Tropinone reductase {Thale cress (Ara | 1e-08 | |
| d1zk4a1 | 251 | c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase | 2e-08 | |
| d1vl8a_ | 251 | c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga | 3e-08 | |
| d1sbya1 | 254 | c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase | 4e-08 | |
| d2c07a1 | 251 | c.2.1.2 (A:54-304) beta-keto acyl carrier protein | 5e-08 | |
| d1x1ta1 | 260 | c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydroge | 6e-08 | |
| d1g0oa_ | 272 | c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase | 7e-08 | |
| d1iy8a_ | 258 | c.2.1.2 (A:) Levodione reductase {Corynebacterium | 1e-07 | |
| d1ydea1 | 250 | c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase | 1e-07 | |
| d1zema1 | 260 | c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconoba | 1e-07 | |
| d1w6ua_ | 294 | c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondr | 1e-07 | |
| d1k2wa_ | 256 | c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter s | 1e-07 | |
| d1yo6a1 | 250 | c.2.1.2 (A:1-250) Putative carbonyl reductase snif | 2e-07 | |
| d1ae1a_ | 258 | c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu | 2e-07 | |
| d1nffa_ | 244 | c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycob | 2e-07 | |
| d1fmca_ | 255 | c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase | 3e-07 | |
| d2a4ka1 | 241 | c.2.1.2 (A:2-242) beta-keto acyl carrier protein r | 3e-07 | |
| d1ja9a_ | 259 | c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reduc | 3e-07 | |
| d1hxha_ | 253 | c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydroge | 6e-07 | |
| d1geea_ | 261 | c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megat | 7e-07 | |
| d2rhca1 | 257 | c.2.1.2 (A:5-261) beta-keto acyl carrier protein r | 9e-07 | |
| d1ulsa_ | 242 | c.2.1.2 (A:) beta-keto acyl carrier protein reduct | 1e-06 | |
| d1dhra_ | 236 | c.2.1.2 (A:) Dihydropteridin reductase (pteridine | 1e-06 | |
| d1gega_ | 255 | c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Kl | 1e-06 | |
| d1ooea_ | 235 | c.2.1.2 (A:) Dihydropteridin reductase (pteridine | 2e-06 | |
| d1uzma1 | 237 | c.2.1.2 (A:9-245) beta-keto acyl carrier protein r | 2e-06 | |
| d1zmta1 | 252 | c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Ag | 4e-06 | |
| d1uaya_ | 241 | c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogena | 5e-06 | |
| d1mxha_ | 266 | c.2.1.2 (A:) Dihydropteridin reductase (pteridine | 7e-06 | |
| d1gz6a_ | 302 | c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase do | 1e-05 | |
| d1jtva_ | 285 | c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroi | 2e-05 | |
| d1edoa_ | 244 | c.2.1.2 (A:) beta-keto acyl carrier protein reduct | 2e-05 | |
| d1xu9a_ | 269 | c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase | 2e-05 | |
| d2bd0a1 | 240 | c.2.1.2 (A:2-241) Bacterial sepiapterin reductase | 2e-05 | |
| d1q7ba_ | 243 | c.2.1.2 (A:) beta-keto acyl carrier protein reduct | 3e-05 | |
| d2fr1a1 | 259 | c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI | 3e-05 | |
| d1oaaa_ | 259 | c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus mus | 3e-05 | |
| d1wmaa1 | 275 | c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydrox | 6e-05 | |
| d2ag5a1 | 245 | c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR fami | 3e-04 | |
| d1o5ia_ | 234 | c.2.1.2 (A:) beta-keto acyl carrier protein reduct | 3e-04 | |
| d2o23a1 | 248 | c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydr | 4e-04 | |
| d2a35a1 | 212 | c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pse | 4e-04 | |
| d1c0pa1 | 268 | c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxida | 4e-04 | |
| d1fjha_ | 257 | c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase | 5e-04 | |
| d2bkaa1 | 232 | c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {H | 5e-04 | |
| d1e7wa_ | 284 | c.2.1.2 (A:) Dihydropteridin reductase (pteridine | 7e-04 | |
| d1e5qa1 | 182 | c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase | 8e-04 | |
| d1ulua_ | 256 | c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermoph | 0.001 | |
| d1jaya_ | 212 | c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase | 0.001 | |
| d7mdha1 | 175 | c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum ( | 0.002 | |
| d1d7oa_ | 297 | c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (B | 0.004 |
| >d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} Length = 338 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Escherichia coli [TaxId: 562]
Score = 283 bits (723), Expect = 1e-94
Identities = 166/340 (48%), Positives = 211/340 (62%), Gaps = 18/340 (5%)
Query: 6 NILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVG 65
+LVTGG+G+IG+H +QLLQ G V+++DNL NS + ++ L G K F G
Sbjct: 2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGG----KHPTFVEG 57
Query: 66 DLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCK 125
D+RN+ + ++ + VIHF LKAV ESVQ P Y+DNN+ GT+ L AM N K
Sbjct: 58 DIRNEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVK 117
Query: 126 KLVFSSSATIYGQPEKIPCVE-DFPYGAMNPYGRTKQWCEEIAFDVQKADPEWRIILLRY 184
+FSSSAT+YG KIP VE +PYG++K E+I D+QKA P+W I LLRY
Sbjct: 118 NFIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPDWSIALLRY 177
Query: 185 FNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAVRDYIHVM 244
FNPVGAH SG +GEDP+GIPNNLMPYI QVAVGR L ++G DYPT+DG+ VRDYIHVM
Sbjct: 178 FNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVM 237
Query: 245 DLA-------------DGCIAYNLGNGKGISVLEMVAAFEKASGKKIPIKFCPRRVGDAT 291
DLA G YNLG G G SVL++V AF KA GK + F PRR GD
Sbjct: 238 DLADGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKACGKPVNYHFAPRREGDLP 297
Query: 292 AVYAATDKAHKELGWKPKYGIEDMCAHQWNWAKNNPMGYQ 331
A +A KA +EL W+ +++M W+W +P GY
Sbjct: 298 AYWADASKADRELNWRVTRTLDEMAQDTWHWQSRHPQGYP 337
|
| >d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 347 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 256 bits (655), Expect = 2e-84
Identities = 160/349 (45%), Positives = 217/349 (62%), Gaps = 26/349 (7%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHV 64
K +LVTGGAG+IG+H ++L++ G+ V+ DNL NS ++V R++ L + F+
Sbjct: 2 KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTK----HHIPFYE 57
Query: 65 GDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNC 124
DL ++ L+K+F K ++VIHF LKAV ES Q P RY+ NN++GT+ L + M +YN
Sbjct: 58 VDLCDRKGLEKVFKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNV 117
Query: 125 KKLVFSSSATIYG----QPEKIPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKADPE-WRI 179
K VFSSSAT+YG P IP E+ P G NPYG TK E I D+ +D + W+
Sbjct: 118 SKFVFSSSATVYGDATRFPNMIPIPEECPLGPTNPYGHTKYAIENILNDLYNSDKKSWKF 177
Query: 180 ILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAVRD 239
+LRYFNP+GAH SG +GEDP GIPNNL+PY+ QVAVGR +L ++G DY ++DG+ +RD
Sbjct: 178 AILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDGTPIRD 237
Query: 240 YIHVMDLADG-----------------CIAYNLGNGKGISVLEMVAAFEKASGKKIPIKF 282
YIHV+DLA G C +NLG+GKG +V E+ AF KASG +P K
Sbjct: 238 YIHVVDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGSTVFEVYHAFCKASGIDLPYKV 297
Query: 283 CPRRVGDATAVYAATDKAHKELGWKPKYGIEDMCAHQWNWAKNNPMGYQ 331
RR GD + A D+A +EL W+ + +ED C W W NP GYQ
Sbjct: 298 TGRRAGDVLNLTAKPDRAKRELKWQTELQVEDSCKDLWKWTTENPFGYQ 346
|
| >d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} Length = 346 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Human (Homo sapiens) [TaxId: 9606]
Score = 252 bits (643), Expect = 1e-82
Identities = 179/348 (51%), Positives = 224/348 (64%), Gaps = 24/348 (6%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHN------SVPEAVDRVKDLAGPELAK 58
+ +LVTGGAG+IG+H L+LL+ G+ V+IDN HN S+PE++ RV++L G +
Sbjct: 3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTG----R 58
Query: 59 KLEFHVGDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQA 118
+EF D+ ++ L +LF F AVIHF LKAV ESVQ P Y+ NL GTI L +
Sbjct: 59 SVEFEEMDILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEI 118
Query: 119 MAKYNCKKLVFSSSATIYGQPEKIPCVEDFPYGAM-NPYGRTKQWCEEIAFDVQKADPEW 177
M + K LVFSSSAT+YG P+ +P E P G NPYG++K + EE+ D+ +AD W
Sbjct: 119 MKAHGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQADKTW 178
Query: 178 RIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAV 237
+LLRYFNP GAH SG +GEDP+GIPNNLMPY+ QVA+GR LNV+G DY T+DG+ V
Sbjct: 179 NAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGV 238
Query: 238 RDYIHVMDLADGCIA-------------YNLGNGKGISVLEMVAAFEKASGKKIPIKFCP 284
RDYIHV+DLA G IA YNLG G G SVL+MV A EKASGKKIP K
Sbjct: 239 RDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGKKIPYKVVA 298
Query: 285 RRVGDATAVYAATDKAHKELGWKPKYGIEDMCAHQWNWAKNNPMGYQT 332
RR GD A YA A +ELGW G++ MC W W K NP G+ T
Sbjct: 299 RREGDVAACYANPSLAQEELGWTAALGLDRMCEDLWRWQKQNPSGFGT 346
|
| >d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 312 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-glucuronate decarboxylase 1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 246 bits (628), Expect = 1e-80
Identities = 81/336 (24%), Positives = 136/336 (40%), Gaps = 44/336 (13%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHV 64
K IL+TGGAGF+G+H +L+ G +V ++DN V+
Sbjct: 2 KRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIG-----------HEN 50
Query: 65 GDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNC 124
+L N D ++ L+ + + + H + + + +P + N IGT+N+ +
Sbjct: 51 FELINHDVVEPLY--IEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGA 108
Query: 125 KKLVFSSSATIYGQPEKIPCVEDF-----PYGAMNPYGRTKQWCEEIAFDVQKADPEWRI 179
+ L+ +S++ +YG PE P ED+ P G Y K+ E + + K + +
Sbjct: 109 R-LLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQE-GVEV 166
Query: 180 ILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAVRD 239
+ R FN G D + + N +I Q G L VYG GS R
Sbjct: 167 RVARIFNTFGPRMHM---NDGRVVSN----FILQALQGE--PLTVYG------SGSQTRA 211
Query: 240 YIHVMDLADGCIA---------YNLGNGKGISVLEMVAAFEKASGKKIPIKFCPRRVGDA 290
+ +V DL +G +A NLGN + ++LE + G I+F D
Sbjct: 212 FQYVSDLVNGLVALMNSNVSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDDP 271
Query: 291 TAVYAATDKAHKELGWKPKYGIEDMCAHQWNWAKNN 326
KA LGW+P +E+ ++ +
Sbjct: 272 QKRKPDIKKAKLMLGWEPVVPLEEGLNKAIHYFRKE 307
|
| >d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 361 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Score = 234 bits (598), Expect = 2e-75
Identities = 78/360 (21%), Positives = 129/360 (35%), Gaps = 61/360 (16%)
Query: 6 NILVTGGAGFIGTHCALQLLQ-GGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHV 64
IL+TGGAGFIG+ +++ VV ID L + ++ L+ + + F
Sbjct: 2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAG-----NLESLSDISESNRYNFEH 56
Query: 65 GDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAM----- 119
D+ + ++ ++F + +AV+H A V S+ P + + N++GT L +
Sbjct: 57 ADICDSAEITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWS 116
Query: 120 ----AKYNCKKLVFSSSATIYGQPEKIP----------CVEDFPYGAMNPYGRTKQWCEE 165
K N + S+ +YG E Y +PY +K +
Sbjct: 117 ALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSASKASSDH 176
Query: 166 IAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVY 225
+ ++ I+ N G P P L+P + A+ P L +Y
Sbjct: 177 LVRAWRRTY-GLPTIVTNCSNNYG----------PYHFPEKLIPLVILNALEGKP-LPIY 224
Query: 226 GQDYPTKDGSAVRDYIHVMDLADGCI----------AYNLGNGKGISVLEMVAAF----- 270
G G +RD+++V D A YN+G L++V
Sbjct: 225 G------KGDQIRDWLYVEDHARALHMVVTEGKAGETYNIGGHNEKKNLDVVFTICDLLD 278
Query: 271 ---EKASGKKIPIKFCPRRVGDATAVYAATDKAHKELGWKPKYGIEDMCAHQWNWAKNNP 327
KA+ + I + R G K +ELGWKP E W N
Sbjct: 279 EIVPKATSYREQITYVADRPGHDRRYAIDAGKISRELGWKPLETFESGIRKTVEWYLANT 338
|
| >d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Escherichia coli [TaxId: 562]
Score = 233 bits (594), Expect = 5e-75
Identities = 79/365 (21%), Positives = 140/365 (38%), Gaps = 53/365 (14%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELA--KKLEF 62
K L+TG G G++ A LL+ G++V I +S +RV + K
Sbjct: 2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFN--TERVDHIYQDPHTCNPKFHL 59
Query: 63 HVGDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKY 122
H GDL + +L ++ + + V + GA+ VA S + P D + +GT+ L +A+
Sbjct: 60 HYGDLSDTSNLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFL 119
Query: 123 NCKK---LVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKADPEWRI 179
+K +S++ +YG ++IP E P+ +PY K + I + +++
Sbjct: 120 GLEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYRESYG-MYA 178
Query: 180 ILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAVRD 239
FN HES + GE + + I +A G L G +D +D
Sbjct: 179 CNGILFN----HESPRRGET--FVTRKITRAIANIAQGLESCL-YLGNMDSLRDWGHAKD 231
Query: 240 YIHVMDLA---DGCIAYNLGNGKGISVLEMVAAFEKASGKKIPIKFCP------------ 284
Y+ + + + + + G SV + V G K+ +
Sbjct: 232 YVKMQWMMLQQEQPEDFVIATGVQYSVRQFVEMAAAQLGIKLRFEGTGVEEKGIVVSVTG 291
Query: 285 -------------------RRVGDATAVYAATDKAHKELGWKPKY----GIEDMCAHQWN 321
R + + KAH++LGWKP+ + +M A+
Sbjct: 292 HDAPGVKPGDVIIAVDPRYFRPAEVETLLGDPTKAHEKLGWKPEITLREMVSEMVANDLE 351
Query: 322 WAKNN 326
AK +
Sbjct: 352 AAKKH 356
|
| >d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptomyces venezuelae [TaxId: 54571]
Score = 209 bits (533), Expect = 2e-66
Identities = 81/344 (23%), Positives = 138/344 (40%), Gaps = 44/344 (12%)
Query: 6 NILVTGGAGFIGTHCALQLLQGGF------KVVLIDNLHNSVPEAVDRVKDLAGPELAKK 59
+LVTGGAGFIG+H QLL G + +V+++D+L + +LA + +
Sbjct: 2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYA-----GNRANLAPVDADPR 56
Query: 60 LEFHVGDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAM 119
L F GD+R D + +A++HF A V S+ + + N+ GT L Q
Sbjct: 57 LRFVHGDIR--DAGLLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCA 114
Query: 120 AKYNCKKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKADPEWRI 179
++V S+ +YG + E P +PY +K + +A + +
Sbjct: 115 VDAGVGRVVHVSTNQVYGSIDSGSWTESSPLEPNSPYAASKAGSDLVARAYHRT-YGLDV 173
Query: 180 ILLRYFNPVGAHESGKLGEDPKGIPNNLMP-YIQQVAVGRHPELNVYGQDYPTKDGSAVR 238
+ R N G P P L+P ++ + G L +YG DG+ VR
Sbjct: 174 RITRCCNNYG----------PYQHPEKLIPLFVTNLLDGG--TLPLYG------DGANVR 215
Query: 239 DYIHVMDLADGCIA----------YNLGNGKGISVLEMVAAFEKASGKKIP-IKFCPRRV 287
+++H D G Y++G G ++ E+ + G ++ R
Sbjct: 216 EWVHTDDHCRGIALVLAGGRAGEIYHIGGGLELTNRELTGILLDSLGADWSSVRKVADRK 275
Query: 288 GDATAVYAATDKAHKELGWKPKYGIEDMCAHQWNWAKNNPMGYQ 331
G K +ELG++P+ D A W + N ++
Sbjct: 276 GHDLRYSLDGGKIERELGYRPQVSFADGLARTVRWYRENRGWWE 319
|
| >d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} Length = 341 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-N-acetylglucosamine 4-epimerase WbpP species: Pseudomonas aeruginosa [TaxId: 287]
Score = 205 bits (521), Expect = 2e-64
Identities = 85/339 (25%), Positives = 134/339 (39%), Gaps = 33/339 (9%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHV 64
K L+TG AGFIG++ LL+ KVV +DN +D V+ L + +F
Sbjct: 17 KVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQ 76
Query: 65 GDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNC 124
GD+RN DD + + + V+H AL +V S+ P N+ G +N+ A
Sbjct: 77 GDIRNLDDCN--NACAGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKV 134
Query: 125 KKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKADPEWRIILLRY 184
+ +++S++ YG +P VED ++PY TK E A + + I LRY
Sbjct: 135 QSFTYAASSSTYGDHPGLPKVEDTIGKPLSPYAVTKYVNELYADVFSRC-YGFSTIGLRY 193
Query: 185 FNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAVRDYIHVM 244
FN G +DP G ++P + + + G DG RD+ ++
Sbjct: 194 FNVFGRR------QDPNGAYAAVIPKWTSSMIQGDD-VYING------DGETSRDFCYIE 240
Query: 245 DLADGCI------------AYNLGNGKGISVLEMVAAFEKASGKK-----IPIKFCPRRV 287
+ + YN+ G S+ ++ A + + R
Sbjct: 241 NTVQANLLAATAGLDARNQVYNIAVGGRTSLNQLFFALRDGLAENGVSYHREPVYRDFRE 300
Query: 288 GDATAVYAATDKAHKELGWKPKYGIEDMCAHQWNWAKNN 326
GD A KA K LG+ PKY + A W
Sbjct: 301 GDVRHSLADISKAAKLLGYAPKYDVSAGVALAMPWYIMF 339
|
| >d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} Length = 347 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Human (Homo sapiens) [TaxId: 9606]
Score = 200 bits (510), Expect = 1e-62
Identities = 67/355 (18%), Positives = 131/355 (36%), Gaps = 41/355 (11%)
Query: 5 KNI-LVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSV-PEAVDRVKDLAGPELAKKLEF 62
+N+ L+TG G G++ A LL+ G++V I +S ++ + + ++
Sbjct: 1 RNVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKL 60
Query: 63 HVGDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKY 122
H GDL + L K+ + K + + GA V S D + +GT+ L A+
Sbjct: 61 HYGDLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTC 120
Query: 123 ---NCKKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKADPEWRI 179
N K +S++ +YG+ ++IP E P+ +PYG K + I + ++A + +
Sbjct: 121 GLINSVKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAAKLYAYWIVVNFREAYNLFAV 180
Query: 180 ILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAVRD 239
FN + + + ++ +G+ G +D +D
Sbjct: 181 N-GILFNHESPRRG------ANFVTRKISRSVAKIYLGQLE-CFSLGNLDAKRDWGHAKD 232
Query: 240 YIHVMDL---ADGCIAYNLGNGKGISV---------------------LEMVAAFEKASG 275
Y+ M L D + + G+ SV V ++
Sbjct: 233 YVEAMWLMLQNDEPEDFVIATGEVHSVREFVEKSFLHIGKTIVWEGKNENEVGRCKETGK 292
Query: 276 KKIPIKFCPRRVGDATAVYAATDKAHKELGWKPKY----GIEDMCAHQWNWAKNN 326
+ + R + + KA ++L WKP+ + +M + N
Sbjct: 293 VHVTVDLKYYRPTEVDFLQGDCTKAKQKLNWKPRVAFDELVREMVHADVELMRTN 347
|
| >d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} Length = 315 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) species: Escherichia coli [TaxId: 562]
Score = 192 bits (489), Expect = 7e-60
Identities = 52/343 (15%), Positives = 108/343 (31%), Gaps = 48/343 (13%)
Query: 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEF 62
+++ + + G G +G+ QL Q G +++
Sbjct: 1 AKQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRDE----------------------- 37
Query: 63 HVGDLRNKDDLDKLFSSQKFEAVIHFG-ALKAVAESVQHPFRYFDNNLIGTINLYQAMAK 121
+L + + F+S++ + V + + + +P + N++ N+ A +
Sbjct: 38 --LNLLDSRAVHDFFASERIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQ 95
Query: 122 YNCKKLVFSSSATIYGQPEKIPCVEDF-----PYGAMNPYGRTKQWCEEIAFDVQKADPE 176
+ KL+F S+ IY + K P E PY K ++ +
Sbjct: 96 NDVNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAIAKIAGIKLCESYNRQYG- 154
Query: 177 WRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSA 236
+ N G H++ + L+ + + P++ V+G P ++
Sbjct: 155 RDYRSVMPTNLYGPHDNFHPSNS--HVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLH 212
Query: 237 VRDYIHVMDLADGCI-------------AYNLGNGKGISVLEMVAAFEKASGKKIPIKFC 283
V D N+G G ++ E+ K G K + F
Sbjct: 213 VDDMAAASIHVMELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKGRVVFD 272
Query: 284 PRRVGDATAVYAATDKAHKELGWKPKYGIEDMCAHQWNWAKNN 326
+ + +LGW + +E A + W N
Sbjct: 273 ASKPDGTPRKLLDVTRL-HQLGWYHEISLEAGLASTYQWFLEN 314
|
| >d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]} Length = 383 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Trypanosoma brucei [TaxId: 5691]
Score = 189 bits (480), Expect = 7e-58
Identities = 128/380 (33%), Positives = 188/380 (49%), Gaps = 56/380 (14%)
Query: 6 NILVTGGAGFIGTHCALQLLQ-GGFKVVLIDNLHNS------------VPEAVDRVKDLA 52
+LV GGAG+IG+H LL+ VV++D+L + V + +
Sbjct: 4 RVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPK 63
Query: 53 GPELAKKLEFHVGDLRNKDDLDKLFSSQK-FEAVIHFGALKAVAESVQHPFRYFDNNLIG 111
P + VGD+RN+D L+ +F+ +AV+H A AV ESV+ P +Y+DNN++G
Sbjct: 64 PPWADRYAALEVGDVRNEDFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVG 123
Query: 112 TINLYQAMAKYNCKKLVFSSSATIYGQPEKIPCVEDFPYGAM-------NPYGRTKQWCE 164
+ L QAM + C K++FSSSA I+G P + + +PYG +K E
Sbjct: 124 ILRLLQAMLLHKCDKIIFSSSAAIFGNPTMGSVSTNAEPIDINAKKSPESPYGESKLIAE 183
Query: 165 EIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKG----IPNNLMPYIQQVAVGRHP 220
+ D +A + I LRYFN GAHE G +GE +G IP L + +A +
Sbjct: 184 RMIRDCAEAYG-IKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSDIAPDQRL 242
Query: 221 ----------ELNVYGQDYPTKDGSAVRDYIHVMDLADGCI------------------- 251
+ ++G DYPT DG+ VRDY+HV DLA I
Sbjct: 243 TIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFS 302
Query: 252 AYNLGNGKGISVLEMVAAFEKASGKKIPIKFCPRRVGDATAVYAATDKAHKELGWKPKYG 311
+NLG +G SV E++ K +G IP++ C RR GD + AA+DKA + LGWKPKY
Sbjct: 303 VFNLGTSRGYSVREVIEVARKTTGHPIPVRECGRREGDPAYLVAASDKAREVLGWKPKYD 362
Query: 312 IED-MCAHQWNWAKNNPMGY 330
+ + W + + +P GY
Sbjct: 363 TLEAIMETSWKFQRTHPNGY 382
|
| >d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} Length = 338 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-tyvelose-2-epimerase species: Salmonella typhi [TaxId: 90370]
Score = 175 bits (444), Expect = 5e-53
Identities = 74/350 (21%), Positives = 131/350 (37%), Gaps = 46/350 (13%)
Query: 7 ILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGD 66
+L+TGG GF+G++ A L G +++ DNL S A D + L+ EF GD
Sbjct: 3 LLITGGCGFLGSNLASFALSQGIDLIVFDNL--SRKGATDNLHWLSS---LGNFEFVHGD 57
Query: 67 LRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCK- 125
+RNK+D+ +L + ++ H A+ S+ +P F+ N+ GT+NL +A+ +YN
Sbjct: 58 IRNKNDVTRLITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNC 117
Query: 126 KLVFSSSATIYGQPEKIPCV----------------EDFPYGAMNPYGRTKQWCEEIAFD 169
+++SS+ +YG E+ E +PYG +K ++ D
Sbjct: 118 NIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLDFHSPYGCSKGAADQYMLD 177
Query: 170 VQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDY 229
+ ++ G + +G ++ G + + G
Sbjct: 178 YARIFGLNTVVFRHSSMYGGRQFAT----YDQGWVGWFCQKAVEIKNGINKPFTISG--- 230
Query: 230 PTKDGSAVRDYIHVMDLADGCIA--------------YNLGNGKGISVLEMVAAFEKASG 275
+G VRD +H D+ +S+LE+ E
Sbjct: 231 ---NGKQVRDVLHAEDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLLEDYCN 287
Query: 276 KKIPIKFCPRRVGDATAVYAATDKAHKELGWKPKYGIEDMCAHQWNWAKN 325
+ P R D A K + W PK +D ++W +
Sbjct: 288 IDMRFTNLPVRESDQRVFVADIKKITNAIDWSPKVSAKDGVQKMYDWTSS 337
|
| >d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} Length = 321 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Pseudomonas aeruginosa [TaxId: 287]
Score = 167 bits (424), Expect = 4e-50
Identities = 56/336 (16%), Positives = 126/336 (37%), Gaps = 33/336 (9%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHV 64
++ LVTG G G + A LL+ G++V + +S R+++L + +++
Sbjct: 1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTR--WRLREL---GIEGDIQYED 55
Query: 65 GDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYN- 123
GD+ + + + + + V + A V S P + +G +L +A+ +++
Sbjct: 56 GDMADACSVQRAVIKAQPQEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSP 115
Query: 124 CKKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKADPEWRIILLR 183
+ +S++ ++G + E+ P+ +PYG K + I + +++
Sbjct: 116 ETRFYQASTSEMFGLIQAERQDENTPFYPRSPYGVAKLYGHWITVNYRESFG-LHASSGI 174
Query: 184 YFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAVRDYIHV 243
FN + + + + ++ +G+ EL + + A RD+
Sbjct: 175 LFNHESPL------RGIEFVTRKVTDAVARIKLGKQQELRLG-------NVDAKRDWGFA 221
Query: 244 MDLADGCIA---------YNLGNGKGISVLEMVAAFEKASGKK----IPIKFCPRRVGDA 290
D + Y + G +V +M + G + I R +
Sbjct: 222 GDYVEAMWLMLQQDKADDYVVATGVTTTVRDMCQIAFEHVGLDYRDFLKIDPAFFRPAEV 281
Query: 291 TAVYAATDKAHKELGWKPKYGIEDMCAHQWNWAKNN 326
+ KA + LGWKP+ ++++
Sbjct: 282 DVLLGNPAKAQRVLGWKPRTSLDELIRMMVEADLRR 317
|
| >d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 346 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Score = 166 bits (421), Expect = 2e-49
Identities = 77/357 (21%), Positives = 130/357 (36%), Gaps = 55/357 (15%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGG--FKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEF 62
KNI+VTGGAGFIG++ + V ++D L + + ++ + G ++E
Sbjct: 3 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNK--ANLEAILG----DRVEL 56
Query: 63 HVGDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKY 122
VGD+ + + +DKL + +H+ A S+ P + N IGT L +A KY
Sbjct: 57 VVGDIADAELVDKLAAKADAI--VHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKY 114
Query: 123 NCKKLVFSSSATIYGQPEK-----------IPCVEDFPYGAMNPYGRTKQWCEEIAFDVQ 171
+ + S+ P + + Y +PY TK + I
Sbjct: 115 DIRFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSSPYSSTKAASDLIVKAWV 174
Query: 172 KADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPT 231
++ + + N G ++ I + I + G P+ +YG
Sbjct: 175 RSFG-VKATISNCSNNYGPYQH---------IEKFIPRQITNILAGIKPK--LYG----- 217
Query: 232 KDGSAVRDYIHVMDLADGCIA-------------YNLGNGKGISVLEMVAAFEKASGKKI 278
+G VRD+IH D + G A G VLE++ EK K
Sbjct: 218 -EGKNVRDWIHTNDHSTGVWAILTKGRMGETYLIGADGEKNNKEVLELI--LEKMGQPKD 274
Query: 279 PIKFCPRRVGDATAVYAATDKAHKELGWKPKY-GIEDMCAHQWNWAKNNPMGYQTKR 334
R G K ELGW P++ + W +N ++ ++
Sbjct: 275 AYDHVTDRAGHDLRYAIDASKLRDELGWTPQFTDFSEGLEETIQWYTDNQDWWKAEK 331
|
| >d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 363 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose-3', 5'-epimerase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 165 bits (418), Expect = 7e-49
Identities = 61/342 (17%), Positives = 112/342 (32%), Gaps = 42/342 (12%)
Query: 1 MASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKL 60
+ I +TG GFI +H A +L G V+ D N E
Sbjct: 12 PSENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMT-----------EDMFCD 60
Query: 61 EFHVGDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMA 120
EFH+ DLR ++ K+ + + + NN + + N+ +A
Sbjct: 61 EFHLVDLRVMENCLKVTEGVDHV-FNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAAR 119
Query: 121 KYNCKKLVFSSSATIYGQPEK-------IPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKA 173
K+ ++SSA IY + ++ + + +P + +G K EE+ K
Sbjct: 120 INGIKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAFGLEKLATEELCKHYNKD 179
Query: 174 DPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKD 233
+ R+ N G + A + D
Sbjct: 180 FG-IECRIGRFHNIYGPF------------GTWKGGREKAPAAFCRKAQTSTDRFEMWGD 226
Query: 234 GSAVRDYIHVMDLADGCIA---------YNLGNGKGISVLEMVAAFEKASGKKIPIKFCP 284
G R + + + +G + N+G+ + +S+ EM KK+PI P
Sbjct: 227 GLQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEMVLSFEEKKLPIHHIP 286
Query: 285 RRVGDATAVYAATDKAHKELGWKPKYGIEDMCAHQWNWAKNN 326
+ + ++LGW P +++ + W K
Sbjct: 287 GP-EGVRGRNSDNNLIKEKLGWAPNMRLKEGLRITYFWIKEQ 327
|
| >d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 339 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 147 bits (370), Expect = 5e-42
Identities = 58/334 (17%), Positives = 108/334 (32%), Gaps = 20/334 (5%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLH-NSVPEAVDRVKDLAGPELAKKLEFH 63
K L+TG G G++ LL G++V + N + ++ + ++ H
Sbjct: 2 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLH 61
Query: 64 VGDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQA----M 119
DL + L + K + V + A VA S + P D G + L +A
Sbjct: 62 YADLTDASSLRRWIDVIKPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHT 121
Query: 120 AKYNCKKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKADPEWRI 179
+ + ++ P E P+ +PY +K + ++A
Sbjct: 122 IDSGRTVKYYQAGSSEMFGSTPPPQSETTPFHPRSPYAASKCAAHWYTVNYREAYG-LFA 180
Query: 180 ILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAVRD 239
FN + + + ++ VG +L G ++D D
Sbjct: 181 CNGILFNHESPR------RGENFVTRKITRALGRIKVGLQTKL-FLGNLQASRDWGFAGD 233
Query: 240 YIHVMDL------ADGCIAYNLGNGKGISVLEMVAAFEKASGKK-IPIKFCPRRVGDATA 292
Y+ M L D + L++ + + K + I R +
Sbjct: 234 YVEAMWLMLQQEKPDDYVVATEEGHTVEEFLDVSFGYLGLNWKDYVEIDQRYFRPAEVDN 293
Query: 293 VYAATDKAHKELGWKPKYGIEDMCAHQWNWAKNN 326
+ KA + LGWKP+ G E + +
Sbjct: 294 LQGDASKAKEVLGWKPQVGFEKLVKMMVDEDLEL 327
|
| >d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} Length = 342 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Aldehyde reductase II species: Sporobolomyces salmonicolor [TaxId: 5005]
Score = 121 bits (302), Expect = 3e-32
Identities = 55/346 (15%), Positives = 96/346 (27%), Gaps = 56/346 (16%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLE-FH 63
+LVTG GF+ +H QLL+ G+KV + ++ + + E
Sbjct: 12 SLVLVTGANGFVASHVVEQLLEHGYKVRGTAR----SASKLANLQKRWDAKYPGRFETAV 67
Query: 64 VGDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYN 123
V D+ + D++ A I V + GT+N +A A
Sbjct: 68 VEDMLKQGAYDEVIKGAAGVAHIAS-----VVSFSNKYDEVVTPAIGGTLNALRAAAATP 122
Query: 124 CKKLVF---SSSATIYGQPEK------------------IPCVEDFPYGAMNPYGRTKQW 162
K S+ + + +P E P ++ Y +K
Sbjct: 123 SVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTLPESDPQKSLWVYAASKTE 182
Query: 163 CEEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPEL 222
E A+ + + N I P Q +
Sbjct: 183 AELAAWKFMDENKPHFTLNAVLPNYT--------------IGTIFDPETQSGSTSGWMMS 228
Query: 223 NVYGQDYPTKDGSAVRDYIHVMDLADGCIA----------YNLGNGKGISVLEMVAAFEK 272
G+ P + Y+ +D+ + G ++A F K
Sbjct: 229 LFNGEVSPALALMPPQYYVSAVDIGLLHLGCLVLPQIERRRVYGTAGTFDWNTVLATFRK 288
Query: 273 A-SGKKIPIKFCPRRVGDATAVYAATDKAHKELGWKPKYGIEDMCA 317
K P F + + A + + K LG IE+
Sbjct: 289 LYPSKTFPADFPDQGQDLSKFDTAPSLEILKSLGRPGWRSIEESIK 334
|
| >d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} Length = 356 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-glucose-4,6-dehydratase species: Yersinia pseudotuberculosis [TaxId: 633]
Score = 117 bits (293), Expect = 8e-31
Identities = 54/333 (16%), Positives = 103/333 (30%), Gaps = 17/333 (5%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHV 64
K + VTG GF G +L L G V +VP + + +A ++ +
Sbjct: 9 KRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETAR------VADGMQSEI 62
Query: 65 GDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNC 124
GD+R+++ L + + E V H A V S P + N++GT+ L +A+
Sbjct: 63 GDIRDQNKLLESIREFQPEIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGG 122
Query: 125 K--KLVFSSSATIYGQPEKIPCVEDFPYGAMNPYG--------RTKQWCEEIAFDVQKAD 174
+ +S + E+ G +PY T +
Sbjct: 123 VKAVVNITSDKCYDNKEWIWGYRENEAMGGYDPYSNSKGCAELVTSSYRNSFFNPANYGQ 182
Query: 175 PEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDG 234
+ +R N +G + P + + + + +
Sbjct: 183 HGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVIIRNPHAIRPWQHVLEPLSGYL 242
Query: 235 SAVRDYIHVMDLADGCIAYNLGNGKGISVLEMVAAFEKASGKKIPIKF-CPRRVGDATAV 293
+ + + V +V K G+ + +A +
Sbjct: 243 LLAQKLYTDGAEYAEGWNFGPNDADATPVKNIVEQMVKYWGEGASWQLDGNAHPHEAHYL 302
Query: 294 YAATDKAHKELGWKPKYGIEDMCAHQWNWAKNN 326
KA +LGW P++ + + W KN
Sbjct: 303 KLDCSKAKMQLGWHPRWNLNTTLEYIVGWHKNW 335
|
| >d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 393 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sulfolipid biosynthesis protein SQD1 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 111 bits (277), Expect = 2e-28
Identities = 65/367 (17%), Positives = 117/367 (31%), Gaps = 46/367 (12%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPE--------- 55
++V GG G+ G AL L + ++V ++DNL + + ++ L
Sbjct: 2 SRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRW 61
Query: 56 ---LAKKLEFHVGDLRNKDDLDKLFSSQKFEAVIHFGALK---AVAESVQHPFRYFDNNL 109
K +E +VGD+ + + L + F S + ++V+HFG + NN+
Sbjct: 62 KALTGKSIELYVGDICDFEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNV 121
Query: 110 IGTINLYQAMAKYNCKKLVFSSSATIYGQPEKIPCVEDF--------------------P 149
IGT+N+ A+ ++ + + I E +
Sbjct: 122 IGTLNVLFAIKEFGEECHLVKLGTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSF 181
Query: 150 YGAMNPYGRTKQWCEEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKG-IPNNLM 208
Y + A+ ++ D ++ + HE + D L
Sbjct: 182 YHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAVFGTALN 241
Query: 209 PYIQQVAVGRHPELNV----YGQDYPTKDGSAVRDYIHVMDLADGCIAYNLGNGKGISVL 264
+ Q AVG + +D + G + SV
Sbjct: 242 RFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAKAGEFRVFNQFTEQFSVN 301
Query: 265 EMVAAFEKASGK-----KIPIKFCPRRVGDATAVYAATDKAHKELGWKPKYGIEDMCAHQ 319
E+ + KA K K PR + A K ELG +P Y + +
Sbjct: 302 ELASLVTKAGSKLGLDVKKMTVPNPRVEAEEHYYNAKHTKL-MELGLEPHYLSDSLLDSL 360
Query: 320 WNWAKNN 326
N+A
Sbjct: 361 LNFAVQF 367
|
| >d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} Length = 342 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Polymyxin resistance protein ArnA (PrmI) species: Escherichia coli [TaxId: 562]
Score = 100 bits (247), Expect = 1e-24
Identities = 48/349 (13%), Positives = 103/349 (29%), Gaps = 41/349 (11%)
Query: 6 NILVTGGAGFIGTHCALQLL-QGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHV 64
+L+ G GFIG H +LL + ++V +D +++ ++ F
Sbjct: 2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNH----------PHFHFVE 51
Query: 65 GDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNC 124
GD+ + + +K + V+ A+ E ++P R F+ + + + + KY
Sbjct: 52 GDISIHSEWIEYHV-KKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRK 110
Query: 125 KKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYG------RTKQWCEEIAFDVQKADPEWR 178
+ + S+S +K + +KQ + + + + +
Sbjct: 111 RIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQF 170
Query: 179 IILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAVR 238
+ L G + I + G +L G+
Sbjct: 171 TL--FRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDG 228
Query: 239 DYIHVMDL------ADGCIAYNLGNGKGISVLEMVAAFEKASGKKIPIKFCP-------- 284
+ DG I S+ E+ + K P
Sbjct: 229 IEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVV 288
Query: 285 -------RRVGDATAVYAATDKAHKELGWKPKYGIEDMCAHQWNWAKNN 326
+ D + AH+ L W+PK +++ ++
Sbjct: 289 ESSSYYGKGYQDVEHRKPSIRNAHRCLDWEPKIDMQETIDETLDFFLRT 337
|
| >d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]} Length = 307 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: ADP-L-glycero-D-mannoheptose 6-epimerase species: Escherichia coli [TaxId: 562]
Score = 91.6 bits (225), Expect = 9e-22
Identities = 42/317 (13%), Positives = 87/317 (27%), Gaps = 14/317 (4%)
Query: 7 ILVTGGAGFIGTHCALQLL-QGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVG 65
I+VTGGAGFIG++ L +G ++++DNL + G + ++ ++
Sbjct: 2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKD-------------GTKFVNLVDLNIA 48
Query: 66 DLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCK 125
D +K+D + + + + S + + + +
Sbjct: 49 DYMDKEDFLIQIMAGEEFGDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLERE 108
Query: 126 KLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKADPEWRIILLRYF 185
+S+ +E Y ++ + + +I+ RYF
Sbjct: 109 IPFLYASSAATYGGRTSDFIESREYEKPLNVYGYSKFLFDEYVRQILPEANSQIVGFRYF 168
Query: 186 NPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAVRDYIHVMD 245
N G E K N + N D + V +
Sbjct: 169 NVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENG 228
Query: 246 LADGCIAYNLGNGKGISVLEMVAAFEKASGKKIPIKFCPRRVGDATAVYAATDKAHKELG 305
++ +V + A+ K + + A
Sbjct: 229 VSGIFNLGTGRAESFQAVADATLAYHKKGQIEYIPFPDKLKGRYQAFTQADLTNLRAAGY 288
Query: 306 WKPKYGIEDMCAHQWNW 322
KP + + W
Sbjct: 289 DKPFKTVAEGVTEYMAW 305
|
| >d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} Length = 312 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Pinoresinol-lariciresinol reductase species: Giant arborvitae (Thuja plicata) [TaxId: 3316]
Score = 77.9 bits (190), Expect = 7e-17
Identities = 30/287 (10%), Positives = 70/287 (24%), Gaps = 48/287 (16%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHN-SVPEAVDRVKDLAGPELAKKLEFH 63
+L+ GG G+IG + G ++ S + V + +
Sbjct: 4 SRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFK----QLGAKLI 59
Query: 64 VGDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYN 123
L + L ++++ + L +A+ +
Sbjct: 60 EASLDDHQRLVDALKQVDVVISALA-------------GGVLSHHILEQLKLVEAIKEAG 106
Query: 124 CKKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKADPEWRIILLR 183
K S D A+ P T ++ ++ A + +
Sbjct: 107 NIKRFLPSE---------FGMDPDIMEHALQPGSITFIDKRKVRRAIEAASIPYTYVSSN 157
Query: 184 YFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAVRDYIHV 243
F G + + + ++ +YG D
Sbjct: 158 MFA---------------GYFAGSLAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTY 202
Query: 244 MDLA------DGCIAYNLGNGKGISVLEMVAAFEKASGKKIPIKFCP 284
+ Y +S E++ +E+ S + + +
Sbjct: 203 TIKSIDDPQTLNKTMYIRPPMNILSQKEVIQIWERLSEQNLDKIYIS 249
|
| >d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} Length = 307 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Phenylcoumaran benzylic ether reductase species: Loblolly pine (Pinus taeda) [TaxId: 3352]
Score = 75.2 bits (183), Expect = 5e-16
Identities = 36/284 (12%), Positives = 67/284 (23%), Gaps = 43/284 (15%)
Query: 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLH--NSVPEAVDRVKDLAGPELAKKL 60
S IL+ G G+IG H A L G L+ +S E ++
Sbjct: 2 SRSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKAS----GA 57
Query: 61 EFHVGDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMA 120
G + + L + + + +N+ +A+
Sbjct: 58 NIVHGSIDDHASLVEAVKNVDV-----------------VISTVGSLQIESQVNIIKAIK 100
Query: 121 KYNCKKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKADPEWRII 180
+ K F S +G + + ++ E
Sbjct: 101 EVGTVKRFFPSE---FGNDVDNVHAVEPAKSVFEVKAKVRRAIEAEGIPYTYVSSNC--- 154
Query: 181 LLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAVRDY 240
+ + P ++ V E D
Sbjct: 155 ---FAGYFLRSLAQAGLTAPPRDKVVILGDGNARVVFVKEE-----------DIGTFTIK 200
Query: 241 IHVMDLADGCIAYNLGNGKGISVLEMVAAFEKASGKKIPIKFCP 284
Y +S+ E+VA +EK K + + P
Sbjct: 201 AVDDPRTLNKTLYLRLPANTLSLNELVALWEKKIDKTLEKAYVP 244
|
| >d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Negative transcriptional regulator NmrA species: Aspergillus nidulans [TaxId: 162425]
Score = 74.3 bits (181), Expect = 1e-15
Identities = 32/294 (10%), Positives = 64/294 (21%), Gaps = 65/294 (22%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHV 64
K I V G G G G V H+ + ++ + +
Sbjct: 4 KTIAVVGATGRQGASLIRVAAAVGHHVRAQV--HSLKGLIAEELQAIPN------VTLFQ 55
Query: 65 GDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNC 124
G L N L + + + + + +L A +
Sbjct: 56 GPLLNNVPLMD-------------TLFEGAHLAFINTTSQAGDEIAIGKDLADAAKRAGT 102
Query: 125 KKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKADPEWRIILLRY 184
+ S + YG + Q P + Y
Sbjct: 103 IQHYIYS-----------SMPDHSLYGPWPAVPMWAPKFTVENYVRQLGLPSTFVYAGIY 151
Query: 185 FNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAVRDYIHVM 244
NN + + P +
Sbjct: 152 N-------------------NNFTSLPYPLFQMELMPDGTFEWHAPFDPDIPLPWLDAEH 192
Query: 245 DLADGCIA-------------YNLGNGKGISVLEMVAAFEKASGKKIPIKFCPR 285
D+ + L + +S +++ AAF +A +++ P+
Sbjct: 193 DVGPALLQIFKDGPQKWNGHRIALT-FETLSPVQVCAAFSRALNRRVTYVQVPK 245
|
| >d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 252 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein At5g02240 (T7H20 290) species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 71.8 bits (174), Expect = 4e-15
Identities = 39/291 (13%), Positives = 89/291 (30%), Gaps = 56/291 (19%)
Query: 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLE 61
A+ +LVTG +G G +L +G K V + ++ ++ + +
Sbjct: 1 ANLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSA----------QGKEKIGGEAD 50
Query: 62 FHVGDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAK 121
+GD+ + D ++ + Q +A++ + + P + I Y
Sbjct: 51 VFIGDITDADSIN--PAFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVD 108
Query: 122 YN--CKKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKADPEWRI 179
+ ++ + A + P +N G + + AD
Sbjct: 109 WIGQKNQIDAAKVAGVKHIVVVGSMGGTNPDHPLNKLGNGNILVWKRKAEQYLADSGTPY 168
Query: 180 ILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAVRD 239
++R + ++++ VG+ EL
Sbjct: 169 TIIRAGGLLDKEGG-----------------VRELLVGKDDELLQTD-----------TK 200
Query: 240 YIHVMDLADGCIA-----------YNLGN---GKGISVLEMVAAFEKASGK 276
+ D+A+ CI ++LG+ G + A F + + +
Sbjct: 201 TVPRADVAEVCIQALLFEEAKNKAFDLGSKPEGTSTPTKDFKALFSQVTSR 251
|
| >d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} Length = 298 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) species: Salmonella enterica serovar typhimurium [TaxId: 90371]
Score = 70.7 bits (171), Expect = 1e-14
Identities = 44/321 (13%), Positives = 82/321 (25%), Gaps = 44/321 (13%)
Query: 6 NILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVG 65
NIL+ G G +G L G ++ +D G
Sbjct: 2 NILLFGKTGQVGWELQRSLAPVG-NLIALDVHSK----------------------EFCG 38
Query: 66 DLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCK 125
D N + + + + +++ A AV ++ P N + +A +
Sbjct: 39 DFSNPKGVAETVRKLRPDVIVNAAAHTAVDKAESEPELAQLLNATSVEAIAKAANETGAW 98
Query: 126 KLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKADPEWRIILLRYF 185
+ +S+ G IP E +N YG+TK E+ D +R +
Sbjct: 99 VVHYSTDYVFPG-TGDIPWQETDATSPLNVYGKTKLAGEKALQDNCPKHLIFRTSWVYAG 157
Query: 186 NPVG--------AHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAV 237
A E L + + + +
Sbjct: 158 KGNNFAKTMLRLAKERQTLSVINDQYGAPTGAELLADCTAHAIRVALNKPEVAGLYHLVA 217
Query: 238 RDYIHVMDLADGCIAYNLGNGKGISVLEMVAAFEKASGKKIPIKFCPRRVGDATAVYAAT 297
D A G +++ E+ +P P T
Sbjct: 218 GGTTTWHDYAALVFDEARKAGITLALTEL---------NAVPTSAYPTPASRPGNSRLNT 268
Query: 298 DKAHKELGWKPKY---GIEDM 315
+K + G++ M
Sbjct: 269 EKFQRNFDLILPQWELGVKRM 289
|
| >d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} Length = 281 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: DTDP-4-dehydrorhamnose reductase RfbD species: Clostridium acetobutylicum [TaxId: 1488]
Score = 69.1 bits (167), Expect = 4e-14
Identities = 48/318 (15%), Positives = 86/318 (27%), Gaps = 53/318 (16%)
Query: 6 NILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVG 65
IL+TG G +G QL +V+ D
Sbjct: 3 KILITGANGQLGREIQKQLKGKNVEVIPTD--------------------------VQDL 36
Query: 66 DLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCK 125
D+ N ++K F+ +K VI+ A AV + + + N IG NL A +
Sbjct: 37 DITNVLAVNKFFNEKKPNVVINCAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVGAE 96
Query: 126 KLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKADPEWRIILLRYF 185
+ S+ ++ K P E + YG+TK E + R L
Sbjct: 97 IVQISTD-YVFDGEAKEPITEFDEVNPQSAYGKTKLEGENFVKALNPKYYIVRTAWL--- 152
Query: 186 NPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAVRDYIHVMD 245
G NN + + + V+ Q + + +
Sbjct: 153 ---------------YGDGNNFVKTMINLGKTHDELKVVHDQVGTPTSTVDLARVVLKVI 197
Query: 246 LADGCIAYNLGNGKGISVLEMVAAFEKASGKKIPIKFCPRRVGDATAVYAA-----TDKA 300
++ S + + +G + + C A
Sbjct: 198 DEKNYGTFHCTCKGICSWYDFAVEIFRLTGIDVKVTPCTTEEFPRPAKRPKYSVLRNYML 257
Query: 301 HKELGWKP---KYGIEDM 315
G K +++
Sbjct: 258 ELTTGDITREWKESLKEY 275
|
| >d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 297 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Peroxisomal trans 2-enoyl CoA reductase species: Human (Homo sapiens) [TaxId: 9606]
Score = 62.4 bits (151), Expect = 1e-11
Identities = 35/176 (19%), Positives = 61/176 (34%), Gaps = 17/176 (9%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHV 64
+ +VTGGA IG +LL+ G VV+ + A D ++ P ++
Sbjct: 13 QVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQ 72
Query: 65 GDLRNKDDLDKLFSSQKFEAVIHFGALKAVA-------------ESVQHPFRYFDNNLIG 111
++RN+++++ L + FG + + S + + NL G
Sbjct: 73 CNIRNEEEVNNLVK----STLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTG 128
Query: 112 TINLYQAMAKYNCKKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQWCEEIA 167
T + +A+ K+ S I P Y TK E A
Sbjct: 129 TFYMCKAVYSSWMKEHGGSIVNIIVPTKAGFPLAVHSGAARAGVYNLTKSLALEWA 184
|
| >d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} Length = 254 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 15-hydroxyprostaglandin dehydrogenase, PGDH species: Human (Homo sapiens) [TaxId: 9606]
Score = 61.2 bits (148), Expect = 2e-11
Identities = 37/148 (25%), Positives = 57/148 (38%), Gaps = 20/148 (13%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHV 64
K LVTG A IG A LL G KV L+D + + + + P+ K F
Sbjct: 4 KVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQ---KTLFIQ 60
Query: 65 GDLRNKDDLDKLFSSQKFEAVIHFGALK-----AVAESVQHPFRYFDNNLIGTINLYQA- 118
D+ ++ L F + V HFG L A + ++ + NL+ I+
Sbjct: 61 CDVADQQQLRDTFR----KVVDHFGRLDILVNNAGVNNEKNWEKTLQINLVSVISGTYLG 116
Query: 119 ---MAKYNCKK----LVFSSSATIYGQP 139
M+K N + + SS A +
Sbjct: 117 LDYMSKQNGGEGGIIINMSSLAGLMPVA 144
|
| >d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} Length = 272 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein R05D8.7 species: Caenorhabditis elegans [TaxId: 6239]
Score = 61.2 bits (148), Expect = 2e-11
Identities = 26/162 (16%), Positives = 52/162 (32%), Gaps = 28/162 (17%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHV 64
K +++TG + IG A+ Q G V + + E + E K++ V
Sbjct: 6 KTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSE--KQVNSVV 63
Query: 65 GDLRNKDDLDKLFSSQKFEAVIHFGAL-----------------KAVAESVQHPFRYFDN 107
D+ +D D++ + + FG + + + +
Sbjct: 64 ADVTTEDGQDQIIN----STLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKL 119
Query: 108 NLIGTINLYQAMAKYNCK-----KLVFSSSATIYGQPEKIPC 144
NL I + + + + V S A QP+ +
Sbjct: 120 NLQAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQAQPDFLYY 161
|
| >d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 205 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Biliverdin IX beta reductase species: Human (Homo sapiens) [TaxId: 9606]
Score = 60.0 bits (144), Expect = 3e-11
Identities = 33/200 (16%), Positives = 64/200 (32%), Gaps = 30/200 (15%)
Query: 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEF 62
+ K I + G G G Q +Q G++V + R E +
Sbjct: 2 AVKKIAIFGATGQTGLTTLAQAVQAGYEVT-----------VLVRDSSRLPSEGPRPAHV 50
Query: 63 HVGDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKY 122
VGD+ D+DK +AVI ++ G N+ AM +
Sbjct: 51 VVGDVLQAADVDKTV--AGQDAVIVLLG-------TRNDLSPTTVMSEGARNIVAAMKAH 101
Query: 123 NCKKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKADPEWRIILL 182
K+V +SA + P K+P + ++++ ++ ++
Sbjct: 102 GVDKVVACTSAFLLWDPTKVPP----------RLQAVTDDHIRMHKVLRESGLKYVAVMP 151
Query: 183 RYFNPVGAHESGKLGEDPKG 202
+ + + D +G
Sbjct: 152 PHIGDQPLTGAYTVTLDGRG 171
|
| >d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 264 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase (5l265) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 60.4 bits (146), Expect = 3e-11
Identities = 27/159 (16%), Positives = 55/159 (34%), Gaps = 28/159 (17%)
Query: 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEF 62
+EK ++TG + IG A+ + G KV + + E ++ E + +
Sbjct: 4 AEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSE--QNVNS 61
Query: 63 HVGDLRNKDDLDKLFSSQKFEAVIHFGALKAV-----------------AESVQHPFRYF 105
V D+ D++ S + FG L + A+S++
Sbjct: 62 VVADVTTDAGQDEILS----TTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATL 117
Query: 106 DNNLIGTINLYQAMAKYN-----CKKLVFSSSATIYGQP 139
+ NL I L + + + S ++ ++ P
Sbjct: 118 NLNLRSVIALTKKAVPHLSSTKGEIVNISSIASGLHATP 156
|
| >d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} Length = 257 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative dehydrogenase ARPG836 (MGC4172) species: Human (Homo sapiens) [TaxId: 9606]
Score = 60.3 bits (146), Expect = 4e-11
Identities = 42/241 (17%), Positives = 78/241 (32%), Gaps = 46/241 (19%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHV 64
+ LVTG +G IG A L+Q G KVV ++ E K P L +
Sbjct: 11 RLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPG---TLIPYR 67
Query: 65 GDLRNKDDLDKLFSSQKFEAVIHFGAL-------------KAVAESVQHPFRYFDNNLIG 111
DL N++D+ +FS + ++ S F+ N++
Sbjct: 68 CDLSNEEDILSMFS----AIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLA 123
Query: 112 TINLYQAMAKYNCKK-------LVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTK---- 160
+ + ++ + +S + P + Y TK
Sbjct: 124 LSICTREAYQSMKERNVDDGHIININSMSGHRV----------LPLSVTHFYSATKYAVT 173
Query: 161 QWCEEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHP 220
E + ++++A R + +P G E+ + P +Q+ + P
Sbjct: 174 ALTEGLRQELREAQTHIRATCI---SP-GVVETQFAFKLHDKDPEKAAATYEQMKCLK-P 228
Query: 221 E 221
E
Sbjct: 229 E 229
|
| >d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} Length = 276 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase species: Pseudomonas sp., lb400 [TaxId: 306]
Score = 59.3 bits (143), Expect = 9e-11
Identities = 35/190 (18%), Positives = 62/190 (32%), Gaps = 42/190 (22%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHV 64
+ +L+TGGA +G + + G KV ++D + +R+ +L + + V
Sbjct: 6 EAVLITGGASGLGRALVDRFVAEGAKVAVLDK-------SAERLAELET-DHGDNVLGIV 57
Query: 65 GDLRNKDDLDKLFSSQKFEAVIHFGAL------------------KAVAESVQHPFRYFD 106
GD+R+ +D + S V FG + F
Sbjct: 58 GDVRSLEDQKQAAS----RCVARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFH 113
Query: 107 NNLIGTINLYQAMAKYNCKK----LVFSSSATIYGQPEKIPCVEDFPYGAMNPY--GRTK 160
N+ G I+ +A + S+A Y Y A G +
Sbjct: 114 INVKGYIHAVKACLPALVASRGNVIFTISNAGFYPNGGGP------LYTAAKHAIVGLVR 167
Query: 161 QWCEEIAFDV 170
+ E+A V
Sbjct: 168 ELAFELAPYV 177
|
| >d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} Length = 274 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein F25D1.5 species: Caenorhabditis elegans [TaxId: 6239]
Score = 59.3 bits (143), Expect = 9e-11
Identities = 23/121 (19%), Positives = 47/121 (38%), Gaps = 6/121 (4%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHV 64
K++++TG + IG A+ + G +V + + + E ++ P A+K+ V
Sbjct: 5 KSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVP--AEKINAVV 62
Query: 65 GDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNC 124
D+ D + + + FG + + + N + LYQ K N
Sbjct: 63 ADVTEASGQDDIIN----TTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNF 118
Query: 125 K 125
+
Sbjct: 119 Q 119
|
| >d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} Length = 248 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein TTHA0369 species: Thermus thermophilus [TaxId: 274]
Score = 57.9 bits (140), Expect = 2e-10
Identities = 31/153 (20%), Positives = 52/153 (33%), Gaps = 33/153 (21%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHV 64
K +LVTGGA IG A + G V L D PE + + + G F
Sbjct: 6 KGVLVTGGARGIGRAIAQAFAREGALVALCDLR----PEGKEVAEAIGG-------AFFQ 54
Query: 65 GDLRNKDDLDKLFSSQKFEAVIHFGAL-------------KAVAESVQHPFRYFDNNLIG 111
DL ++ + + EA G + A+ + R + NL
Sbjct: 55 VDLEDERERVRFVE----EAAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTA 110
Query: 112 TINLYQAMAKYNCKK-----LVFSSSATIYGQP 139
++L A+ K + +S ++ +
Sbjct: 111 PMHLSALAAREMRKVGGGAIVNVASVQGLFAEQ 143
|
| >d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} Length = 244 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 17-beta-hydroxysteroid dehydrogenase type XI species: Human (Homo sapiens) [TaxId: 9606]
Score = 56.5 bits (136), Expect = 5e-10
Identities = 26/153 (16%), Positives = 52/153 (33%), Gaps = 27/153 (17%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHV 64
+ +L+TG IG A + + K+VL D + + E + K L K+ V
Sbjct: 8 EIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGA-----KVHTFV 62
Query: 65 GDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPF-------------RYFDNNLIG 111
D N++D+ + G + + + + + F+ N++
Sbjct: 63 VDCSNREDIYSSAK----KVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLA 118
Query: 112 TINLYQAMAKYNCKK-----LVFSSSATIYGQP 139
+A K + +S+A P
Sbjct: 119 HFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVP 151
|
| >d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 242 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Mouse (Mus musculus) [TaxId: 10090]
Score = 55.8 bits (134), Expect = 9e-10
Identities = 31/170 (18%), Positives = 53/170 (31%), Gaps = 16/170 (9%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHV 64
LVTG IG L G KVV + + + V K+ G +E
Sbjct: 6 LRALVTGAGKGIGRDTVKALHASGAKVVAVT---RTNSDLVSLAKECPG------IEPVC 56
Query: 65 GDLRNKDDLDKLFSS-QKFEAVIH----FGALKAVAESVQHPFRYFDNNLIGTINLYQAM 119
DL + D +K + +++ + + + R F NL + Q +
Sbjct: 57 VDLGDWDATEKALGGIGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMV 116
Query: 120 AKYNCKKLVFSSSATIYGQPEKIPCVEDFPYGAMNPY--GRTKQWCEEIA 167
A+ + V S + + Y + TK E+
Sbjct: 117 ARDMINRGVPGSIVNVSSMVAHVTFPNLITYSSTKGAMTMLTKAMAMELG 166
|
| >d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} Length = 247 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (s)-1-phenylethanol dehydrogenase species: Azoarcus sp. ebn1 [TaxId: 76114]
Score = 56.0 bits (135), Expect = 9e-10
Identities = 24/158 (15%), Positives = 49/158 (31%), Gaps = 29/158 (18%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHV 64
K ++TGGA IG A + G + + D PEA +++L ++
Sbjct: 6 KLAVITGGANGIGRAIAERFAVEGADIAIAD--LVPAPEAEAAIRNLGR-----RVLTVK 58
Query: 65 GDLRNKDDLDKLFSSQKFEAVIHFGALKAV----AESVQHPF---------RYFDNNLIG 111
D+ D++ + + FG + PF + F+ N+
Sbjct: 59 CDVSQPGDVEAFGK----QVISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDS 114
Query: 112 TINLYQAMAKYNCKK-----LVFSSSATIYGQPEKIPC 144
+ +A + + +S+
Sbjct: 115 GFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIEAYTHY 152
|
| >d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} Length = 260 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Mannitol dehydrogenase species: Mushroom (Agaricus bisporus) [TaxId: 5341]
Score = 54.7 bits (131), Expect = 3e-09
Identities = 34/173 (19%), Positives = 54/173 (31%), Gaps = 22/173 (12%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHV 64
K I+VTGG IG + G V +I E ++V G K + +
Sbjct: 10 KTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGV----KTKAYQ 65
Query: 65 GDLRNKDDLDKLFSSQKFEAVIHFGAL-------------KAVAESVQHPFRYFDNNLIG 111
D+ N D + K + G + A + + +D N+ G
Sbjct: 66 CDVSNTDIVTKTIQ----QIDADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFG 121
Query: 112 TINLYQAMAKYNCKKLVFSSSATIYGQPEKIPCVEDFPYGA-MNPYGRTKQWC 163
N +A+AK +K S +I Y +K C
Sbjct: 122 VFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFYNSSKAAC 174
|
| >d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} Length = 254 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase species: Streptomyces hydrogenans [TaxId: 1905]
Score = 54.6 bits (131), Expect = 3e-09
Identities = 27/131 (20%), Positives = 48/131 (36%), Gaps = 25/131 (19%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHV 64
K +++TGGA +G A Q + G +VVL D L EL +
Sbjct: 6 KTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAR--------ELGDAARYQH 57
Query: 65 GDLRNKDDLDKLFSSQKFEAVIHFGALKAVA-------------ESVQHPFRYFDNNLIG 111
D+ ++D ++ + A FG++ + ESV+ + + NL G
Sbjct: 58 LDVTIEEDWQRVVA----YAREEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTG 113
Query: 112 TINLYQAMAKY 122
+ +
Sbjct: 114 VFIGMKTVIPA 124
|
| >d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 244 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Human (Homo sapiens) [TaxId: 9606]
Score = 54.2 bits (130), Expect = 3e-09
Identities = 29/170 (17%), Positives = 57/170 (33%), Gaps = 16/170 (9%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHV 64
+ +LVTG IG L G +VV + + V +E
Sbjct: 8 RRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRE---------CPGIEPVC 58
Query: 65 GDLRNKDDLDKLFSS-QKFEAVIHFGALKAVAE----SVQHPFRYFDNNLIGTINLYQAM 119
DL + + ++ S + +++ A+ + + + R F+ NL I + Q +
Sbjct: 59 VDLGDWEATERALGSVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIV 118
Query: 120 AKYNCKKLVFSSSATIYGQPEKIPCVEDFPYGAMNP--YGRTKQWCEEIA 167
A+ + V + + Q + Y + TK E+
Sbjct: 119 ARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTKGALDMLTKVMALELG 168
|
| >d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} Length = 268 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Rhizome secoisolariciresinol dehydrogenase species: Mayapple (Podophyllum peltatum) [TaxId: 35933]
Score = 54.7 bits (131), Expect = 3e-09
Identities = 24/133 (18%), Positives = 46/133 (34%), Gaps = 17/133 (12%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHV 64
K ++TGGAG IG A ++ G KVV+ D + + + + + F
Sbjct: 7 KVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGS------PDVISFVH 60
Query: 65 GDLRNKDDLDKLFSSQKFE-----------AVIHFGALKAVAESVQHPFRYFDNNLIGTI 113
D+ +D+ L + + V+ + + R D N+ G
Sbjct: 61 CDVTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAF 120
Query: 114 NLYQAMAKYNCKK 126
+ + A+
Sbjct: 121 LVAKHAARVMIPA 133
|
| >d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} Length = 259 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), II [TaxId: 4076]
Score = 53.9 bits (129), Expect = 6e-09
Identities = 31/178 (17%), Positives = 54/178 (30%), Gaps = 24/178 (13%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHV 64
LVTGG+ IG +L G V + + + + + E V
Sbjct: 9 CTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKV-----EASV 63
Query: 65 GDLRNKDDLDKLFSS--QKFEAVIH-------FGALKAVAE-SVQHPFRYFDNNLIGTIN 114
DL ++ + +L ++ F ++ K + +V+ N +
Sbjct: 64 CDLSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYH 123
Query: 115 LYQA-----MAKYNCKKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQWCEEIA 167
L A + SS + P V GAM+ T+ E A
Sbjct: 124 LSVLAHPFLKASERGNVVFISSVSGALAVP--YEAVYGATKGAMD--QLTRCLAFEWA 177
|
| >d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 259 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 52.7 bits (126), Expect = 1e-08
Identities = 23/170 (13%), Positives = 43/170 (25%), Gaps = 22/170 (12%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHV 64
K +LVTGG IG + G + + E + + + ++ V
Sbjct: 9 KTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGF-----QVTGSV 63
Query: 65 GDLRNKDDLDKLFS--SQKFEAVIH--------FGALKAVAESVQHPFRYFDNNLIGTIN 114
D + + +KL S F + + + + + + NL +
Sbjct: 64 CDASLRPEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYH 123
Query: 115 LYQAMAKYNCKKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQWCE 164
L Q + Y TK
Sbjct: 124 LSQLAHPLLKAS-------GCGNIIFMSSIAGVVSASVGSIYSATKGALN 166
|
| >d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} Length = 251 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: R-specific alcohol dehydrogenase species: Lactobacillus brevis [TaxId: 1580]
Score = 51.9 bits (124), Expect = 2e-08
Identities = 27/161 (16%), Positives = 51/161 (31%), Gaps = 23/161 (14%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHV 64
K ++TGG IG A + ++ G KV++ + +A V +++F
Sbjct: 7 KVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGT------PDQIQFFQ 60
Query: 65 GDLRNKDDLDKLFSSQKFEAVIHFGALKAVA-------------ESVQHPFRYFDNNLIG 111
D ++D KLF FG + + + + NL G
Sbjct: 61 HDSSDEDGWTKLFD----ATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDG 116
Query: 112 TINLYQAMAKYNCKKLVFSSSATIYGQPEKIPCVEDFPYGA 152
+ + K + +S + + Y A
Sbjct: 117 VFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNA 157
|
| >d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} Length = 251 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Gluconate 5-dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Score = 51.6 bits (123), Expect = 3e-08
Identities = 21/87 (24%), Positives = 34/87 (39%), Gaps = 8/87 (9%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHV 64
+ LVTGG+ +G A L + G VV+ EA ++ + G +
Sbjct: 6 RVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGV----ETMAFR 61
Query: 65 GDLRNKDDLDKLFSSQKFEAVIHFGAL 91
D+ N +++ KL FG L
Sbjct: 62 CDVSNYEEVKKLLE----AVKEKFGKL 84
|
| >d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} Length = 254 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Drosophila alcohol dehydrogenase species: Fly (Drosophila lebanonensis) [TaxId: 7225]
Score = 51.2 bits (122), Expect = 4e-08
Identities = 23/145 (15%), Positives = 43/145 (29%), Gaps = 14/145 (9%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHV 64
KN++ G IG + +L++ K +I + E + +L + FH
Sbjct: 6 KNVIFVAALGGIGLDTSRELVKRNLKNFVILDR----VENPTALAELKAINPKVNITFHT 61
Query: 65 GDLRNKDDLDKLFSSQKFEAV--IHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKY 122
D+ K + F+ + + A R N G +N A+ +
Sbjct: 62 YDVTVPVAESKKLLKKIFDQLKTVDILINGAGILDDHQIERTIAINFTGLVNTTTAILDF 121
Query: 123 NCKK--------LVFSSSATIYGQP 139
K+ S
Sbjct: 122 WDKRKGGPGGIIANICSVTGFNAIH 146
|
| >d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 251 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Score = 50.8 bits (121), Expect = 5e-08
Identities = 18/73 (24%), Positives = 29/73 (39%), Gaps = 5/73 (6%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHV 64
K LVTG IG A L + V+ I S VD +K + +
Sbjct: 11 KVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGY-----ESSGYA 65
Query: 65 GDLRNKDDLDKLF 77
GD+ K+++ ++
Sbjct: 66 GDVSKKEEISEVI 78
|
| >d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} Length = 260 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: D(-)-3-hydroxybutyrate dehydrogenase species: Pseudomonas fragi [TaxId: 296]
Score = 51.0 bits (121), Expect = 6e-08
Identities = 20/91 (21%), Positives = 32/91 (35%), Gaps = 7/91 (7%)
Query: 1 MASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKL 60
M K +VTG IG A L G +VL +++V+ + K+
Sbjct: 1 MLKGKVAVVTGSTSGIGLGIATALAAQGADIVLNG---FGDAAEIEKVRAGLAAQHGVKV 57
Query: 61 EFHVGDLRNKDDLDKLFSSQKFEAVIHFGAL 91
+ DL + + L AV G +
Sbjct: 58 LYDGADLSKGEAVRGLVD----NAVRQMGRI 84
|
| >d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 272 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Score = 50.5 bits (120), Expect = 7e-08
Identities = 29/133 (21%), Positives = 48/133 (36%), Gaps = 21/133 (15%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHV 64
K LVTG IG A++L + G KV++ NS A + V + +
Sbjct: 19 KVALVTGAGRGIGREMAMELGRRGCKVIVNY--ANSTESAEEVVAAIK--KNGSDAACVK 74
Query: 65 GDLRNKDDLDKLFSSQKFEAVIHFGAL-------------KAVAESVQHPFRYFDNNLIG 111
++ +D+ ++F EAV FG L + + R F N G
Sbjct: 75 ANVGVVEDIVRMFE----EAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRG 130
Query: 112 TINLYQAMAKYNC 124
+ + K+
Sbjct: 131 QFFVAREAYKHLE 143
|
| >d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Levodione reductase species: Corynebacterium aquaticum [TaxId: 144185]
Score = 50.1 bits (119), Expect = 1e-07
Identities = 17/89 (19%), Positives = 39/89 (43%), Gaps = 7/89 (7%)
Query: 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEF 62
+++ +L+TGG +G A++L G K+ L+D + + V + A ++
Sbjct: 3 TDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDA---EVLT 59
Query: 63 HVGDLRNKDDLDKLFSSQKFEAVIHFGAL 91
V D+ ++ ++ + FG +
Sbjct: 60 TVADVSDEAQVEAYVT----ATTERFGRI 84
|
| >d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} Length = 250 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Retinal dehydrogenase/reductase 3 species: Human (Homo sapiens) [TaxId: 9606]
Score = 49.9 bits (119), Expect = 1e-07
Identities = 32/153 (20%), Positives = 52/153 (33%), Gaps = 23/153 (15%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHV 64
K ++VTGG IG + G +VV+ D ++ F +
Sbjct: 7 KVVVVTGGGRGIGAGIVRAFVNSGARVVICDKD----ESGGRALEQELP-----GAVFIL 57
Query: 65 GDLRNKDDLDKLFSS---------QKFEAVIHFGALKAVAESVQHPF-RYFDNNLIGTIN 114
D+ +DD+ L S H + E+ F + + NL+GT
Sbjct: 58 CDVTQEDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYT 117
Query: 115 LYQAMAKYNCKK----LVFSSSATIYGQPEKIP 143
L + Y K + SS GQ + +P
Sbjct: 118 LTKLALPYLRKSQGNVINISSLVGAIGQAQAVP 150
|
| >d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} Length = 260 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Xylitol dehydrogenase species: Gluconobacter oxydans [TaxId: 442]
Score = 50.2 bits (119), Expect = 1e-07
Identities = 21/87 (24%), Positives = 38/87 (43%), Gaps = 9/87 (10%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHV 64
K LVTG G IG AL+L + G + L+D ++ +A V++ + +V
Sbjct: 6 KVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGV-----EARSYV 60
Query: 65 GDLRNKDDLDKLFSSQKFEAVIHFGAL 91
D+ +++ + V FG +
Sbjct: 61 CDVTSEEAVIGTV----DSVVRDFGKI 83
|
| >d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} Length = 294 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR) species: Human (Homo sapiens), [TaxId: 9606]
Score = 50.1 bits (119), Expect = 1e-07
Identities = 18/104 (17%), Positives = 33/104 (31%), Gaps = 4/104 (3%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHV 64
K +TGG +G L G + V+ + + +++ G K+
Sbjct: 26 KVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGN----KVHAIQ 81
Query: 65 GDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNN 108
D+R+ D + S A + A + P N
Sbjct: 82 CDVRDPDMVQNTVSELIKVAGHPNIVINNAAGNFISPTERLSPN 125
|
| >d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} Length = 256 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sorbitol dehydrogenase species: Rhodobacter sphaeroides [TaxId: 1063]
Score = 49.4 bits (117), Expect = 1e-07
Identities = 26/135 (19%), Positives = 49/135 (36%), Gaps = 25/135 (18%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHV 64
K L+TG A IG A ++ G +V + D EA E+
Sbjct: 6 KTALITGSARGIGRAFAEAYVREGARVAIAD----INLEAARATAA----EIGPAACAIA 57
Query: 65 GDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPF-------------RYFDNNLIG 111
D+ ++ +D+ + E + +G++ + + R F N+ G
Sbjct: 58 LDVTDQASIDRCVA----ELLDRWGSIDILVNNAALFDLAPIVEITRESYDRLFAINVSG 113
Query: 112 TINLYQAMAKYNCKK 126
T+ + QA+A+
Sbjct: 114 TLFMMQAVARAMIAG 128
|
| >d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} Length = 250 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative carbonyl reductase sniffer species: Caenorhabditis elegans [TaxId: 6239]
Score = 49.5 bits (117), Expect = 2e-07
Identities = 22/173 (12%), Positives = 47/173 (27%), Gaps = 18/173 (10%)
Query: 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEF 62
S +++VTG IG QL++ +I + E +K + ++
Sbjct: 2 SPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARD--VEKATELKSIKD----SRVHV 55
Query: 63 HVGDLRNKDDLDKLFSSQKFE--------AVIHFGALKAVAESVQHPF----RYFDNNLI 110
+ LD S + + G L + + + D N
Sbjct: 56 LPLTVTCDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTT 115
Query: 111 GTINLYQAMAKYNCKKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQWC 163
+ L Q + S + + + + + Q+
Sbjct: 116 SVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTSGSAQFP 168
|
| >d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), I [TaxId: 4076]
Score = 49.3 bits (117), Expect = 2e-07
Identities = 19/85 (22%), Positives = 34/85 (40%), Gaps = 7/85 (8%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHV 64
LVTGG+ IG +L G +V + E ++ ++ E V
Sbjct: 7 TTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNV-----EGSV 61
Query: 65 GDLRNKDDLDKLFSS--QKFEAVIH 87
DL ++ + DKL + F+ ++
Sbjct: 62 CDLLSRTERDKLMQTVAHVFDGKLN 86
|
| >d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} Length = 244 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative oxidoreductase Rv2002 species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 48.9 bits (116), Expect = 2e-07
Identities = 29/135 (21%), Positives = 41/135 (30%), Gaps = 25/135 (18%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHV 64
K LV+GGA +G ++ G KVV D L ELA +
Sbjct: 7 KVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAA--------ELADAARYVH 58
Query: 65 GDLRNKDDLDKLFSSQKFEAVIHFGALKAVA-------------ESVQHPFRYFDNNLIG 111
D+ AV FG L + ++ R D NL G
Sbjct: 59 LDVTQPAQWKAAVD----TAVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTG 114
Query: 112 TINLYQAMAKYNCKK 126
+A+ K +
Sbjct: 115 VFLGIRAVVKPMKEA 129
|
| >d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} Length = 255 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 7-alpha-hydroxysteroid dehydrogenase species: Escherichia coli [TaxId: 562]
Score = 48.9 bits (116), Expect = 3e-07
Identities = 19/87 (21%), Positives = 34/87 (39%), Gaps = 9/87 (10%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHV 64
K ++TG IG A+ G VV+ D ++ VD ++ L G +
Sbjct: 12 KCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGG-----QAFACR 66
Query: 65 GDLRNKDDLDKLFSSQKFEAVIHFGAL 91
D+ ++ +L L A+ G +
Sbjct: 67 CDITSEQELSALAD----FAISKLGKV 89
|
| >d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} Length = 241 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus, TTHB020 [TaxId: 274]
Score = 48.5 bits (115), Expect = 3e-07
Identities = 24/87 (27%), Positives = 36/87 (41%), Gaps = 12/87 (13%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHV 64
K ILVTG A IG + G +V +D + EAV L + V
Sbjct: 6 KTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVA--------ALEAEAIAVV 57
Query: 65 GDLRNKDDLDKLFSSQKFEAVIHFGAL 91
D+ + ++ +F+ EA+ FG L
Sbjct: 58 ADVSDPKAVEAVFA----EALEEFGRL 80
|
| >d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 259 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,6,8-tetrahydroxynaphthalene reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Score = 48.6 bits (115), Expect = 3e-07
Identities = 34/152 (22%), Positives = 54/152 (35%), Gaps = 25/152 (16%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHV 64
K L TG IG A++L + G VV+ S +A + V +L +
Sbjct: 7 KVALTTGAGRGIGRGIAIELGRRGASVVVNY---GSSSKAAEEVVAEL-KKLGAQGVAIQ 62
Query: 65 GDLRNKDDLDKLFSSQKFEAVIHFGALKAV-------------AESVQHPFRYFDNNLIG 111
D+ ++ LF +AV HFG L V + + + F+ N G
Sbjct: 63 ADISKPSEVVALFD----KAVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRG 118
Query: 112 TINLYQ----AMAKYNCKKLVFSSSATIYGQP 139
+ Q + L S +A + G P
Sbjct: 119 QFFVAQQGLKHCRRGGRIILTSSIAAVMTGIP 150
|
| >d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 253 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3beta/17beta hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Score = 47.7 bits (113), Expect = 6e-07
Identities = 25/158 (15%), Positives = 44/158 (27%), Gaps = 29/158 (18%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHV 64
K LVTGGA +G LL G KV D + + EL ++ F
Sbjct: 7 KVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAA--------ELGERSMFVR 58
Query: 65 GDLRNKDDLDKLFSSQKFEAVIHFGALKAVA-------------ESVQHPFRYFDNNLIG 111
D+ ++ D + + G L + ++ R N
Sbjct: 59 HDVSSEADWTLVMA----AVQRRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTES 114
Query: 112 TINLYQAMAKYNCKK----LVFSSSATIYGQPEKIPCV 145
Q + + +S ++ +
Sbjct: 115 VFIGCQQGIAAMKETGGSIINMASVSSWLPIEQYAGYS 152
|
| >d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} Length = 261 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase species: Bacillus megaterium [TaxId: 1404]
Score = 47.4 bits (112), Expect = 7e-07
Identities = 18/88 (20%), Positives = 37/88 (42%), Gaps = 10/88 (11%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLID-NLHNSVPEAVDRVKDLAGPELAKKLEFH 63
K +++TG + +G A++ KVV+ + + ++ +K + G +
Sbjct: 8 KVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGG-----EAIAV 62
Query: 64 VGDLRNKDDLDKLFSSQKFEAVIHFGAL 91
GD+ + D+ L A+ FG L
Sbjct: 63 KGDVTVESDVINLVQ----SAIKEFGKL 86
|
| >d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} Length = 257 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Streptomyces coelicolor [TaxId: 1902]
Score = 47.0 bits (111), Expect = 9e-07
Identities = 15/87 (17%), Positives = 35/87 (40%), Gaps = 9/87 (10%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHV 64
+ LVTG IG A +L + G +V + + + +++ + +
Sbjct: 3 EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGV-----EADGRT 57
Query: 65 GDLRNKDDLDKLFSSQKFEAVIHFGAL 91
D+R+ +++ L + V +G +
Sbjct: 58 CDVRSVPEIEALVA----AVVERYGPV 80
|
| >d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} Length = 242 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus [TaxId: 274]
Score = 46.9 bits (111), Expect = 1e-06
Identities = 21/87 (24%), Positives = 35/87 (40%), Gaps = 14/87 (16%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHV 64
K +L+TG A IG + G ++V D + EA + V V
Sbjct: 6 KAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGA----------HPVV 55
Query: 65 GDLRNKDDLDKLFSSQKFEAVIHFGAL 91
D+ + +++ F+ EA+ H G L
Sbjct: 56 MDVADPASVERGFA----EALAHLGRL 78
|
| >d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 236 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 46.4 bits (109), Expect = 1e-06
Identities = 30/183 (16%), Positives = 56/183 (30%), Gaps = 18/183 (9%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVK-DLAGPELAKKLEFH 63
+ +LV GG G +G+ C + V ID + N A VK + E A ++
Sbjct: 3 RRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEASASVIVKMTDSFTEQADQVTAE 62
Query: 64 VGDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYN 123
VG L +D + A + ++ + ++ + K+
Sbjct: 63 VGKLLGDQKVDAILCVAGGWAGGNA----KSKSLFKNCDLMWKQSIWTSTISSHLATKHL 118
Query: 124 CKKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTK----QWCEEIAFDVQKADPEWRI 179
+ + + + M YG K Q C+ +A
Sbjct: 119 KEGGLLTLAGAKAAL---------DGTPGMIGYGMAKGAVHQLCQSLAGKNSGMPSGAAA 169
Query: 180 ILL 182
I +
Sbjct: 170 IAV 172
|
| >d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} Length = 255 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: meso-2,3-butanediol dehydrogenase species: Klebsiella pneumoniae [TaxId: 573]
Score = 46.3 bits (109), Expect = 1e-06
Identities = 25/134 (18%), Positives = 44/134 (32%), Gaps = 22/134 (16%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHV 64
K LVTG IG AL+L++ GF V + D + + G
Sbjct: 2 KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGG-----HAVAVK 56
Query: 65 GDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESV-------------QHPFRYFDNNLIG 111
D+ ++D + +A G + + + + ++ N+ G
Sbjct: 57 VDVSDRDQVFAAVE----QARKTLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKG 112
Query: 112 TINLYQAMAKYNCK 125
I QA + K
Sbjct: 113 VIWGIQAAVEAFKK 126
|
| >d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 235 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 46.0 bits (108), Expect = 2e-06
Identities = 24/190 (12%), Positives = 51/190 (26%), Gaps = 28/190 (14%)
Query: 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEF 62
S ++V GG G +G+ + G+ V+ I DL+ + A
Sbjct: 1 SSGKVIVYGGKGALGSAILEFFKKNGYTVLNI---------------DLSANDQADSNIL 45
Query: 63 HVGDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKY 122
G+ + + ++ + + + V V + + + M K
Sbjct: 46 VDGNKNWTEQEQSIL--EQTASSLQGSQVDGVF-CVAGGWAGGSASSKDFVKNADLMIKQ 102
Query: 123 NCKKLVFSSSATIYGQPEKIPCVEDFPYGAMNP------YGRTK----QWCEEIAFDVQK 172
+ ++ AM P YG K +A
Sbjct: 103 SVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGPTPSMIGYGMAKAAVHHLTSSLAAKDSG 162
Query: 173 ADPEWRIILL 182
++ +
Sbjct: 163 LPDNSAVLTI 172
|
| >d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 237 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 45.9 bits (108), Expect = 2e-06
Identities = 19/74 (25%), Positives = 29/74 (39%), Gaps = 16/74 (21%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHV 64
+++LVTGG IG A +L G KV + G K L
Sbjct: 8 RSVLVTGGNRGIGLAIAQRLAADGHKVAVTHR----------------GSGAPKGLFGVE 51
Query: 65 GDLRNKDDLDKLFS 78
D+ + D +D+ F+
Sbjct: 52 VDVTDSDAVDRAFT 65
|
| >d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} Length = 252 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Halohydrin dehalogenase HheC species: Agrobacterium tumefaciens [TaxId: 358]
Score = 45.0 bits (106), Expect = 4e-06
Identities = 14/84 (16%), Positives = 27/84 (32%), Gaps = 15/84 (17%)
Query: 8 LVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDL 67
+VT F G AL+L + G V D + D ++ A +
Sbjct: 4 IVTNVKHFGGMGSALRLSEAGHTVACHDE----SFKQKDELEAFAE-------TYPQLKP 52
Query: 68 RNKDDLDKLFSSQKFEAVIHFGAL 91
++ + +L +G +
Sbjct: 53 MSEQEPAELIE----AVTSAYGQV 72
|
| >d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 241 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Thermus thermophilus [TaxId: 274]
Score = 44.8 bits (105), Expect = 5e-06
Identities = 35/177 (19%), Positives = 62/177 (35%), Gaps = 24/177 (13%)
Query: 4 EKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFH 63
E++ LVTGGA +G AL L G++VV++D L + + D+ E ++
Sbjct: 1 ERSALVTGGASGLGRAAALALKARGYRVVVLD-LRREGEDLIYVEGDVTREEDVRRAVAR 59
Query: 64 VGDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYN 123
+ + E ++ ++ R + NL+GT N+ + A
Sbjct: 60 AQEEAPLFAVVSAAGVGLAEKILGKEG----PHGLESFRRVLEVNLLGTFNVLRLAAWAM 115
Query: 124 CKK-----------LVFSSSATIYGQPEKIPCVEDFPYGAMNP--YGRTKQWCEEIA 167
+ + +S A GQ + Y A T E+A
Sbjct: 116 RENPPDAEGQRGVIVNTASVAAFEGQIGQA------AYAASKGGVVALTLPAARELA 166
|
| >d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} Length = 266 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Trypanosoma cruzi [TaxId: 5693]
Score = 44.5 bits (104), Expect = 7e-06
Identities = 33/190 (17%), Positives = 53/190 (27%), Gaps = 33/190 (17%)
Query: 8 LVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDL 67
++TGGA IG A++L Q GF+VV+ A R+ A GDL
Sbjct: 5 VITGGARRIGHSIAVRLHQQGFRVVVHY---RHSEGAAQRLVAELNAARAGSAVLCKGDL 61
Query: 68 RNKDDLDKLFSSQKFEAVIHFGALKAVAESV------------------------QHPFR 103
L + FG + +
Sbjct: 62 SLSSSLLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAE 121
Query: 104 YFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQPEKIPCVEDFPYGAMNPY------G 157
F +N + + L +A A+ + + S P + G
Sbjct: 122 LFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMTDLPLPGFCVYTMAKHALGG 181
Query: 158 RTKQWCEEIA 167
T+ E+A
Sbjct: 182 LTRAAALELA 191
|
| >d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 302 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 44.2 bits (104), Expect = 1e-05
Identities = 28/154 (18%), Positives = 58/154 (37%), Gaps = 23/154 (14%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVK-DLAGPELAKKLEFH 63
+ +LVTG G +G AL + G VV+ D + D E+ ++
Sbjct: 8 RVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKA 67
Query: 64 VGDLRNKDDLDKLFSSQKFEAVIHFGAL------------KAVAESVQHPFRYFDN-NLI 110
V + + + +KL A+ FG + ++ + + +L
Sbjct: 68 VANYDSVEAGEKLVK----TALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLR 123
Query: 111 GTINLYQAMAKYNCKK-----LVFSSSATIYGQP 139
G+ + +A + K+ ++ +S++ IYG
Sbjct: 124 GSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNF 157
|
| >d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Score = 43.7 bits (102), Expect = 2e-05
Identities = 26/151 (17%), Positives = 49/151 (32%), Gaps = 15/151 (9%)
Query: 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAK--KL 60
+ +L+TG + IG H A++L + + + + R+ + A L
Sbjct: 1 ARTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDL-KTQGRLWEAARALACPPGSL 59
Query: 61 EFHVGDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFD-------NNLIGTI 113
E D+R+ + V + D N++GT+
Sbjct: 60 ETLQLDVRDSKSVAAARERVTEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTV 119
Query: 114 NLYQAMAKYNCKK-----LVFSSSATIYGQP 139
+ QA ++ LV S + G P
Sbjct: 120 RMLQAFLPDMKRRGSGRVLVTGSVGGLMGLP 150
|
| >d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 244 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Score = 43.2 bits (101), Expect = 2e-05
Identities = 17/71 (23%), Positives = 31/71 (43%), Gaps = 4/71 (5%)
Query: 7 ILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGD 66
++VTG + IG AL L + G KV++ E V + + G + GD
Sbjct: 4 VVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGG----QAITFGGD 59
Query: 67 LRNKDDLDKLF 77
+ + D++ +
Sbjct: 60 VSKEADVEAMM 70
|
| >d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 11-beta-hydroxysteroid dehydrogenase 1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 43.2 bits (101), Expect = 2e-05
Identities = 26/145 (17%), Positives = 48/145 (33%), Gaps = 11/145 (7%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHV 64
K ++VTG + IG A L + G VV+ ++ + V +L A + +
Sbjct: 15 KKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAAS-AHYIAGTM 73
Query: 65 GDLRNKDDLDKLFSSQ------KFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQA 118
D+ + I +L + + H + + N + + L A
Sbjct: 74 EDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVA 133
Query: 119 MAKYNCKK----LVFSSSATIYGQP 139
+ +V SS A P
Sbjct: 134 ALPMLKQSNGSIVVVSSLAGKVAYP 158
|
| >d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} Length = 240 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Bacterial sepiapterin reductase species: Chlorobium tepidum [TaxId: 1097]
Score = 42.8 bits (100), Expect = 2e-05
Identities = 20/136 (14%), Positives = 44/136 (32%), Gaps = 21/136 (15%)
Query: 7 ILVTGGAGFIGTHCALQLLQGGFKVVLIDN---LHNSVPEAVDRVKDLAGPELAKKLEFH 63
+L+TG IG AL+ + + L + ++++ +
Sbjct: 4 LLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECR-AEGALTDTI 62
Query: 64 VGDLRNKDDLDKLFSSQKFEAVIHFGAL-------------KAVAESVQHPFRYFDNNLI 110
D+ + D+ +L + V +G + + + + NL
Sbjct: 63 TADISDMADVRRLTT----HIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLK 118
Query: 111 GTINLYQAMAKYNCKK 126
GT L QA+ ++
Sbjct: 119 GTFFLTQALFALMERQ 134
|
| >d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} Length = 243 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Escherichia coli [TaxId: 562]
Score = 42.4 bits (99), Expect = 3e-05
Identities = 24/149 (16%), Positives = 42/149 (28%), Gaps = 22/149 (14%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHV 64
K LVTG + IG A L G KV+ N D L + +
Sbjct: 5 KIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISD--------YLGANGKGLM 56
Query: 65 GDLRNKDDLDKLFSSQKFE---------AVIHFGALKAVAESVQHPFRYFDNNLIGTINL 115
++ + ++ + + E + + + NL L
Sbjct: 57 LNVTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRL 116
Query: 116 YQAMAKYNCKK-----LVFSSSATIYGQP 139
+A+ + KK + S G
Sbjct: 117 SKAVMRAMMKKRHGRIITIGSVVGTMGNG 145
|
| >d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} Length = 259 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Erythromycin synthase, eryAI, 1st ketoreductase module species: Saccharopolyspora erythraea [TaxId: 1836]
Score = 42.7 bits (99), Expect = 3e-05
Identities = 19/164 (11%), Positives = 39/164 (23%), Gaps = 4/164 (2%)
Query: 4 EKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFH 63
+LVTGG G +G A L + G +L+ + + + EL
Sbjct: 9 TGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVA----ELEALGART 64
Query: 64 VGDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYN 123
+ D + + + A + +A
Sbjct: 65 TVAACDVTDRESVRELLGGIGDDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGA 124
Query: 124 CKKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQWCEEIA 167
+ + F + Y + + +A
Sbjct: 125 RNLHELTRELDLTAFVLFSSFASAFGAPGLGGYAPGNAYLDGLA 168
|
| >d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 259 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sepiapterin reductase species: Mouse (Mus musculus) [TaxId: 10090]
Score = 42.5 bits (99), Expect = 3e-05
Identities = 15/93 (16%), Positives = 31/93 (33%), Gaps = 6/93 (6%)
Query: 5 KNILVTGGAGFIGTHCALQL---LQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLE 61
++TG + G A QL L G +++ S ++L + K+
Sbjct: 7 AVCVLTGASRGFGRALAPQLARLLSPGSVMLVSA---RSESMLRQLKEELGAQQPDLKVV 63
Query: 62 FHVGDLRNKDDLDKLFSSQKFEAVIHFGALKAV 94
DL + + +L S+ + +
Sbjct: 64 LAAADLGTEAGVQRLLSAVRELPRPEGLQRLLL 96
|
| >d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 275 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Score = 41.8 bits (97), Expect = 6e-05
Identities = 28/200 (14%), Positives = 55/200 (27%), Gaps = 18/200 (9%)
Query: 8 LVTGGAGFIGTHCALQLLQ-GGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGD 66
LVTGG IG L + VVL AV +++ + + + D
Sbjct: 7 LVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLS--PRFHQLDIDD 64
Query: 67 LRNKDDLDKLFSSQKFEAVIHF------GALKAVAESVQHPFRYFDNNLIGTINLYQAMA 120
L++ L + + + N GT ++ +
Sbjct: 65 LQSIRALRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELL 124
Query: 121 KYNCKK---LVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKADPEW 177
+ + SS ++ P T E + + +
Sbjct: 125 PLIKPQGRVVNVSSIMSVRALKSCS------PELQQKFRSETITEEELVGLMNKFVEDTK 178
Query: 178 RIILLRYFNPVGAHESGKLG 197
+ + + P A+ K+G
Sbjct: 179 KGVHQKEGWPSSAYGVTKIG 198
|
| >d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} Length = 245 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dehydrogenase/reductase SDR family member 6, DHRS6 species: Human (Homo sapiens) [TaxId: 9606]
Score = 39.3 bits (91), Expect = 3e-04
Identities = 12/31 (38%), Positives = 16/31 (51%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLID 35
K I++T A IG AL + G KV+ D
Sbjct: 7 KVIILTAAAQGIGQAAALAFAREGAKVIATD 37
|
| >d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} Length = 234 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermotoga maritima [TaxId: 2336]
Score = 39.3 bits (91), Expect = 3e-04
Identities = 10/31 (32%), Positives = 14/31 (45%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLID 35
K +LV + IG A L Q G +V +
Sbjct: 5 KGVLVLAASRGIGRAVADVLSQEGAEVTICA 35
|
| >d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 248 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Score = 39.1 bits (90), Expect = 4e-04
Identities = 11/31 (35%), Positives = 17/31 (54%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLID 35
++TGGA +G A +L+ G VL+D
Sbjct: 6 LVAVITGGASGLGLATAERLVGQGASAVLLD 36
|
| >d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} Length = 212 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein PA4017 species: Pseudomonas aeruginosa [TaxId: 287]
Score = 39.0 bits (89), Expect = 4e-04
Identities = 8/30 (26%), Positives = 13/30 (43%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLI 34
K +L+ G G G H ++L +I
Sbjct: 3 KRVLLAGATGLTGEHLLDRILSEPTLAKVI 32
|
| >d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]} Length = 268 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: D-aminoacid oxidase, N-terminal domain domain: D-aminoacid oxidase, N-terminal domain species: Rhodotorula gracilis [TaxId: 5286]
Score = 39.3 bits (90), Expect = 4e-04
Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Query: 1 MASEKNILVTGGAGFIGTHCALQLLQGGFKVVLID 35
M S+K ++V G +G IG AL L + G+ V ++
Sbjct: 3 MHSQKRVVVLG-SGVIGLSSALILARKGYSVHILA 36
|
| >d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 257 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha-hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Score = 38.7 bits (89), Expect = 5e-04
Identities = 10/31 (32%), Positives = 15/31 (48%)
Query: 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLID 35
I+++G A IG L G ++V ID
Sbjct: 2 SIIVISGCATGIGAATRKVLEAAGHQIVGID 32
|
| >d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} Length = 232 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: TAT-interacting protein TIP30 species: Human (Homo sapiens) [TaxId: 9606]
Score = 38.6 bits (88), Expect = 5e-04
Identities = 6/32 (18%), Positives = 14/32 (43%)
Query: 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLI 34
K++ + G +G G ++L+ G +
Sbjct: 13 QNKSVFILGASGETGRVLLKEILEQGLFSKVT 44
|
| >d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Leishmania major [TaxId: 5664]
Score = 38.5 bits (88), Expect = 7e-04
Identities = 17/98 (17%), Positives = 29/98 (29%), Gaps = 18/98 (18%)
Query: 8 LVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFH---- 63
LVTG A +G A L G+ V L + + A+ + P A ++
Sbjct: 6 LVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNV 65
Query: 64 ----------VGDLRNKDDLDKLFSSQKFEAVIHFGAL 91
+ +L + H+G
Sbjct: 66 ATAPVSGADGSAPVTLFTRCAELVA----ACYTHWGRC 99
|
| >d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 182 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Saccharopine reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Score = 37.7 bits (86), Expect = 8e-04
Identities = 10/45 (22%), Positives = 18/45 (40%), Gaps = 1/45 (2%)
Query: 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDR 47
+ K++L+ G+GF+ L G KV + S +
Sbjct: 1 ATKSVLM-LGSGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAG 44
|
| >d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} Length = 256 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Thermus thermophilus [TaxId: 274]
Score = 37.9 bits (87), Expect = 0.001
Identities = 25/153 (16%), Positives = 47/153 (30%), Gaps = 24/153 (15%)
Query: 5 KNILVTGGAGF--IGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEF 62
K LV G +G A +L + G +V L PEA + L G
Sbjct: 9 KKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGA------LL 62
Query: 63 HVGDLRNKDDLDKLFSSQ-----KFEAVIHFGALKA--------VAESVQHPFRYFDNNL 109
D+ ++LD LF+ + ++H A + Q + +
Sbjct: 63 FRADVTQDEELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSA 122
Query: 110 IGTINLYQAMAKYNCKK---LVFSSSATIYGQP 139
+ + + + + + A+ P
Sbjct: 123 YSLVAVARRAEPLLREGGGIVTLTYYASEKVVP 155
|
| >d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 212 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO) species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Score = 37.0 bits (84), Expect = 0.001
Identities = 11/47 (23%), Positives = 20/47 (42%)
Query: 7 ILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAG 53
+ + GG G +G AL+L G ++V+ + +AG
Sbjct: 3 VALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAG 49
|
| >d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]} Length = 175 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]
Score = 36.1 bits (83), Expect = 0.002
Identities = 13/55 (23%), Positives = 20/55 (36%), Gaps = 4/55 (7%)
Query: 1 MASEKNILVTGGAGFIGTHCALQLLQG---GFKVVLIDNLHNSVPEAVDRVKDLA 52
NI V+G AG I H +L G G + L + ++ +A
Sbjct: 21 WKKLVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLG-SERSFQALEGVA 74
|
| >d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 297 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Score = 36.3 bits (82), Expect = 0.004
Identities = 20/114 (17%), Positives = 34/114 (29%), Gaps = 11/114 (9%)
Query: 5 KNILVTGGAGF--IGTHCALQLLQGGFKVVLIDNLHNSVPEAVD---------RVKDLAG 53
K + G A G A L G ++++ + RV
Sbjct: 9 KRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGS 68
Query: 54 PELAKKLEFHVGDLRNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDN 107
KK+ N +D+ + + K A ++ AE V+ F D
Sbjct: 69 LMEIKKVYPLDAVFDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDI 122
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 335 | |||
| d1udca_ | 338 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 100.0 | |
| d1ek6a_ | 346 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 100.0 | |
| d1z45a2 | 347 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 100.0 | |
| d1db3a_ | 357 | GDP-mannose 4,6-dehydratase {Escherichia coli [Tax | 100.0 | |
| d2b69a1 | 312 | UDP-glucuronate decarboxylase 1 {Human (Homo sapie | 100.0 | |
| d1sb8a_ | 341 | UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo | 100.0 | |
| d1r6da_ | 322 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces | 100.0 | |
| d1kewa_ | 361 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 100.0 | |
| d1oc2a_ | 346 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 100.0 | |
| d1rpna_ | 321 | GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos | 100.0 | |
| d2c5aa1 | 363 | GDP-mannose-3', 5'-epimerase {Thale cress (Arabido | 100.0 | |
| d1gy8a_ | 383 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 100.0 | |
| d1t2aa_ | 347 | GDP-mannose 4,6-dehydratase {Human (Homo sapiens) | 100.0 | |
| d2blla1 | 342 | Polymyxin resistance protein ArnA (PrmI) {Escheric | 100.0 | |
| d1e6ua_ | 315 | GDP-4-keto-6-deoxy-d-mannose epimerase/reductase ( | 100.0 | |
| d1n7ha_ | 339 | GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop | 100.0 | |
| d1orra_ | 338 | CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: | 100.0 | |
| d1i24a_ | 393 | Sulfolipid biosynthesis protein SQD1 {Thale cress | 100.0 | |
| d1rkxa_ | 356 | CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc | 100.0 | |
| d1vl0a_ | 281 | DTDP-4-dehydrorhamnose reductase RfbD {Clostridium | 100.0 | |
| d1y1pa1 | 342 | Aldehyde reductase II {Sporobolomyces salmonicolor | 100.0 | |
| d1eq2a_ | 307 | ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric | 100.0 | |
| d1n2sa_ | 298 | dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S | 100.0 | |
| d1qyda_ | 312 | Pinoresinol-lariciresinol reductase {Giant arborvi | 99.95 | |
| d1qyca_ | 307 | Phenylcoumaran benzylic ether reductase {Loblolly | 99.94 | |
| d2bkaa1 | 232 | TAT-interacting protein TIP30 {Human (Homo sapiens | 99.94 | |
| d1hdoa_ | 205 | Biliverdin IX beta reductase {Human (Homo sapiens) | 99.94 | |
| d2q46a1 | 252 | Hypothetical protein At5g02240 (T7H20_290) {Thale | 99.91 | |
| d1xgka_ | 350 | Negative transcriptional regulator NmrA {Aspergill | 99.89 | |
| d1x1ta1 | 260 | D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas | 99.89 | |
| d2d1ya1 | 248 | Hypothetical protein TTHA0369 {Thermus thermophilu | 99.89 | |
| d2c07a1 | 251 | beta-keto acyl carrier protein reductase {Malaria | 99.88 | |
| d1nffa_ | 244 | Putative oxidoreductase Rv2002 {Mycobacterium tube | 99.88 | |
| d1q7ba_ | 243 | beta-keto acyl carrier protein reductase {Escheric | 99.88 | |
| d1vl8a_ | 251 | Gluconate 5-dehydrogenase {Thermotoga maritima [Ta | 99.87 | |
| d1hdca_ | 254 | 3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre | 99.87 | |
| d1fmca_ | 255 | 7-alpha-hydroxysteroid dehydrogenase {Escherichia | 99.87 | |
| d1ulsa_ | 242 | beta-keto acyl carrier protein reductase {Thermus | 99.87 | |
| d1iy8a_ | 258 | Levodione reductase {Corynebacterium aquaticum [Ta | 99.87 | |
| d2ew8a1 | 247 | (s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb | 99.87 | |
| d1uzma1 | 237 | beta-keto acyl carrier protein reductase {Mycobact | 99.87 | |
| d1xq1a_ | 259 | Tropinone reductase {Thale cress (Arabidopsis thal | 99.87 | |
| d1pr9a_ | 244 | Carbonyl reductase {Human (Homo sapiens) [TaxId: 9 | 99.87 | |
| d2ae2a_ | 259 | Tropinone reductase {Jimsonweed (Datura stramonium | 99.87 | |
| d1yxma1 | 297 | Peroxisomal trans 2-enoyl CoA reductase {Human (Ho | 99.86 | |
| d1zema1 | 260 | Xylitol dehydrogenase {Gluconobacter oxydans [TaxI | 99.86 | |
| d1ydea1 | 250 | Retinal dehydrogenase/reductase 3 {Human (Homo sap | 99.86 | |
| d1k2wa_ | 256 | Sorbitol dehydrogenase {Rhodobacter sphaeroides [T | 99.86 | |
| d2rhca1 | 257 | beta-keto acyl carrier protein reductase {Streptom | 99.86 | |
| d1zk4a1 | 251 | R-specific alcohol dehydrogenase {Lactobacillus br | 99.86 | |
| d1yb1a_ | 244 | 17-beta-hydroxysteroid dehydrogenase type XI {Huma | 99.86 | |
| d1cyda_ | 242 | Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1 | 99.86 | |
| d1geea_ | 261 | Glucose dehydrogenase {Bacillus megaterium [TaxId: | 99.86 | |
| d2a35a1 | 212 | Hypothetical protein PA4017 {Pseudomonas aeruginos | 99.85 | |
| d1gega_ | 255 | meso-2,3-butanediol dehydrogenase {Klebsiella pneu | 99.85 | |
| d2bgka1 | 268 | Rhizome secoisolariciresinol dehydrogenase {Mayapp | 99.85 | |
| d1hxha_ | 253 | 3beta/17beta hydroxysteroid dehydrogenase {Comamon | 99.85 | |
| d1spxa_ | 264 | Glucose dehydrogenase (5l265) {Nematode (Caenorhab | 99.85 | |
| d1h5qa_ | 260 | Mannitol dehydrogenase {Mushroom (Agaricus bisporu | 99.85 | |
| d1ae1a_ | 258 | Tropinone reductase {Jimsonweed (Datura stramonium | 99.85 | |
| d2bd0a1 | 240 | Bacterial sepiapterin reductase {Chlorobium tepidu | 99.85 | |
| d1xhla_ | 274 | Hypothetical protein F25D1.5 {Caenorhabditis elega | 99.84 | |
| d1xg5a_ | 257 | Putative dehydrogenase ARPG836 (MGC4172) {Human (H | 99.84 | |
| d1xkqa_ | 272 | Hypothetical protein R05D8.7 {Caenorhabditis elega | 99.84 | |
| d1edoa_ | 244 | beta-keto acyl carrier protein reductase {Oil seed | 99.84 | |
| d1sbya1 | 254 | Drosophila alcohol dehydrogenase {Fly (Drosophila | 99.83 | |
| d1bdba_ | 276 | Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps | 99.83 | |
| d1snya_ | 248 | Carbonyl reductase sniffer {Fruit fly (Drosophila | 99.83 | |
| d2gdza1 | 254 | 15-hydroxyprostaglandin dehydrogenase, PGDH {Human | 99.83 | |
| d1oaaa_ | 259 | Sepiapterin reductase {Mouse (Mus musculus) [TaxId | 99.82 | |
| d2a4ka1 | 241 | beta-keto acyl carrier protein reductase {Thermus | 99.82 | |
| d1xu9a_ | 269 | 11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom | 99.82 | |
| d1ulua_ | 256 | Enoyl-ACP reductase {Thermus thermophilus [TaxId: | 99.81 | |
| d1gz6a_ | 302 | (3R)-hydroxyacyl-CoA dehydrogenase domain of estra | 99.8 | |
| d1jtva_ | 285 | Human estrogenic 17beta-hydroxysteroid dehydrogena | 99.8 | |
| d2fr1a1 | 259 | Erythromycin synthase, eryAI, 1st ketoreductase mo | 99.8 | |
| d1g0oa_ | 272 | 1,3,8-trihydroxynaphtalene reductase (THNR, naphto | 99.8 | |
| d1ja9a_ | 259 | 1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl | 99.8 | |
| d1yo6a1 | 250 | Putative carbonyl reductase sniffer {Caenorhabditi | 99.79 | |
| d1o5ia_ | 234 | beta-keto acyl carrier protein reductase {Thermoto | 99.79 | |
| d2ag5a1 | 245 | Dehydrogenase/reductase SDR family member 6, DHRS6 | 99.79 | |
| d1wmaa1 | 275 | Carbonyl reductase/20beta-hydroxysteroid dehydroge | 99.78 | |
| d1zmta1 | 252 | Halohydrin dehalogenase HheC {Agrobacterium tumefa | 99.77 | |
| d1w6ua_ | 294 | 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H | 99.76 | |
| d1dhra_ | 236 | Dihydropteridin reductase (pteridine reductase) {R | 99.76 | |
| d1ooea_ | 235 | Dihydropteridin reductase (pteridine reductase) {N | 99.75 | |
| d2o23a1 | 248 | Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho | 99.75 | |
| d1qsga_ | 258 | Enoyl-ACP reductase {Escherichia coli [TaxId: 562] | 99.72 | |
| d1e7wa_ | 284 | Dihydropteridin reductase (pteridine reductase) {L | 99.65 | |
| d2pd4a1 | 274 | Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2 | 99.64 | |
| d2h7ma1 | 268 | Enoyl-ACP reductase {Mycobacterium tuberculosis, T | 99.6 | |
| d1uaya_ | 241 | Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t | 99.59 | |
| d1mxha_ | 266 | Dihydropteridin reductase (pteridine reductase) {T | 99.52 | |
| d1d7oa_ | 297 | Enoyl-ACP reductase {Oil seed rape (Brassica napus | 99.51 | |
| d1uh5a_ | 329 | Enoyl-ACP reductase {Malaria parasite (Plasmodium | 99.5 | |
| d1luaa1 | 191 | Methylene-tetrahydromethanopterin dehydrogenase {M | 99.45 | |
| d1fjha_ | 257 | 3-alpha-hydroxysteroid dehydrogenase {Comamonas te | 99.39 | |
| d1ez4a1 | 146 | Lactate dehydrogenase {Lactobacillus pentosus [Tax | 98.53 | |
| d1lssa_ | 132 | Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax | 98.37 | |
| d1mlda1 | 144 | Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982 | 98.3 | |
| d1e5qa1 | 182 | Saccharopine reductase {Rice blast fungus (Magnapo | 98.25 | |
| d1hyea1 | 145 | MJ0490, lactate/malate dehydrogenase {Archaeon Met | 98.21 | |
| d1pzga1 | 154 | Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5 | 98.19 | |
| d2cmda1 | 145 | Malate dehydrogenase {Escherichia coli [TaxId: 562 | 98.04 | |
| d1ldna1 | 148 | Lactate dehydrogenase {Bacillus stearothermophilus | 98.02 | |
| d1y6ja1 | 142 | Lactate dehydrogenase {Clostridium thermocellum [T | 98.01 | |
| d2hmva1 | 134 | Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} | 98.0 | |
| d1v3va2 | 182 | Leukotriene b4 12-hydroxydehydrogenase/prostagland | 97.96 | |
| d1jaya_ | 212 | Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae | 97.93 | |
| d1guza1 | 142 | Malate dehydrogenase {Chlorobium vibrioforme [TaxI | 97.89 | |
| d1o6za1 | 142 | Malate dehydrogenase {Archaeon Haloarcula marismor | 97.86 | |
| d1ojua1 | 142 | Malate dehydrogenase {Archaeon Archaeoglobus fulgi | 97.82 | |
| d1yb5a2 | 174 | Quinone oxidoreductase {Human (Homo sapiens) [TaxI | 97.82 | |
| d1hyha1 | 146 | L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La | 97.81 | |
| d1y7ta1 | 154 | Malate dehydrogenase {Thermus thermophilus [TaxId: | 97.8 | |
| d1a5za1 | 140 | Lactate dehydrogenase {Thermotoga maritima [TaxId: | 97.8 | |
| d1i0za1 | 160 | Lactate dehydrogenase {Human (Homo sapiens), heart | 97.78 | |
| d1kjqa2 | 111 | Glycinamide ribonucleotide transformylase PurT, N- | 97.74 | |
| d1uxja1 | 142 | Malate dehydrogenase {Chloroflexus aurantiacus [Ta | 97.71 | |
| d2ldxa1 | 159 | Lactate dehydrogenase {Mouse (Mus musculus) [TaxId | 97.69 | |
| d1t4ba1 | 146 | Aspartate beta-semialdehyde dehydrogenase {Escheri | 97.69 | |
| d1llda1 | 143 | Lactate dehydrogenase {Bifidobacterium longum, str | 97.68 | |
| d1vi2a1 | 182 | Putative shikimate dehydrogenase YdiB {Escherichia | 97.67 | |
| d1t2da1 | 150 | Lactate dehydrogenase {Malaria parasite (Plasmodiu | 97.67 | |
| d1xa0a2 | 176 | B. subtilis YhfP homologue {Bacillus stearothermop | 97.62 | |
| d7mdha1 | 175 | Malate dehydrogenase {Sorghum (Sorghum vulgare), c | 97.56 | |
| d1iz0a2 | 171 | Quinone oxidoreductase {Thermus thermophilus [TaxI | 97.56 | |
| d1o8ca2 | 77 | Hypothetical protein YhdH {Escherichia coli [TaxId | 97.49 | |
| d1gpja2 | 159 | Glutamyl tRNA-reductase middle domain {Archaeon Me | 97.41 | |
| d1pjqa1 | 113 | Siroheme synthase CysG, domain 1 {Salmonella typhi | 97.38 | |
| d1n1ea2 | 189 | Glycerol-3- phosphate dehydrogenase {Trypanosome ( | 97.36 | |
| d2pv7a2 | 152 | Prephenate dehydrogenase TyrA {Haemophilus influen | 97.34 | |
| d1bg6a2 | 184 | N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A | 97.33 | |
| d1u7za_ | 223 | Coenzyme A biosynthesis bifunctional protein CoaBC | 97.33 | |
| d1qora2 | 179 | Quinone oxidoreductase {Escherichia coli [TaxId: 5 | 97.33 | |
| d2jfga1 | 93 | UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase | 97.33 | |
| d1pqwa_ | 183 | Putative enoyl reductase domain of polyketide synt | 97.3 | |
| d1e3ja2 | 170 | Ketose reductase (sorbitol dehydrogenase) {Silverl | 97.3 | |
| d5mdha1 | 154 | Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982 | 97.26 | |
| d1id1a_ | 153 | Rck domain from putative potassium channel Kch {Es | 97.16 | |
| d1nyta1 | 170 | Shikimate 5-dehydrogenase AroE {Escherichia coli [ | 97.16 | |
| d1gu7a2 | 189 | 2,4-dienoyl-CoA reductase {Yeast (Candida tropical | 97.09 | |
| d1p77a1 | 171 | Shikimate 5-dehydrogenase AroE {Haemophilus influe | 97.07 | |
| d1p3da1 | 96 | UDP-N-acetylmuramate-alanine ligase MurC {Haemophi | 97.06 | |
| d1tt7a2 | 167 | Hypothetical protein YhfP {Bacillus subtilis [TaxI | 97.01 | |
| d2f1ka2 | 165 | Prephenate dehydrogenase TyrA {Synechocystis sp. p | 96.98 | |
| d1pl8a2 | 171 | Ketose reductase (sorbitol dehydrogenase) {Human ( | 96.98 | |
| d1mb4a1 | 147 | Aspartate beta-semialdehyde dehydrogenase {Vibrio | 96.96 | |
| d1piwa2 | 168 | Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas | 96.94 | |
| d1wdka3 | 186 | Fatty oxidation complex alpha subunit, middle doma | 96.93 | |
| d1vj1a2 | 187 | Putative zinc-binding alcohol dehydrogenase {Mouse | 96.93 | |
| d1ks9a2 | 167 | Ketopantoate reductase PanE {Escherichia coli [Tax | 96.91 | |
| d3cuma2 | 162 | Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru | 96.88 | |
| d2hjsa1 | 144 | Usg-1 protein homolog PA3116 {Pseudomonas aerugino | 96.81 | |
| d1mv8a2 | 202 | GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos | 96.77 | |
| d1f0ya2 | 192 | Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum | 96.75 | |
| d1o89a2 | 177 | Hypothetical protein YhdH {Escherichia coli [TaxId | 96.75 | |
| d1uufa2 | 168 | Hypothetical protein YahK {Escherichia coli [TaxId | 96.74 | |
| d1vj0a2 | 182 | Hypothetical protein TM0436 {Thermotoga maritima [ | 96.71 | |
| d1vkna1 | 176 | N-acetyl-gamma-glutamyl-phosphate reductase ArgC { | 96.64 | |
| d1d7ya2 | 121 | NADH-dependent ferredoxin reductase, BphA4 {Pseudo | 96.57 | |
| d1v59a2 | 122 | Dihydrolipoamide dehydrogenase {Baker's yeast (Sac | 96.54 | |
| d1vpda2 | 161 | Hydroxyisobutyrate dehydrogenase {Salmonella typhi | 96.53 | |
| d1pjca1 | 168 | L-alanine dehydrogenase {Phormidium lapideum [TaxI | 96.47 | |
| d1txga2 | 180 | Glycerol-3- phosphate dehydrogenase {Archaeoglobus | 96.42 | |
| d1jqba2 | 174 | Bacterial secondary alcohol dehydrogenase {Clostri | 96.4 | |
| d1nhpa2 | 123 | NADH peroxidase {Enterococcus faecalis [TaxId: 135 | 96.39 | |
| d1npya1 | 167 | Shikimate 5-dehydrogenase-like protein HI0607 {Hae | 96.37 | |
| d1f8fa2 | 174 | Benzyl alcohol dehydrogenase {Acinetobacter calcoa | 96.36 | |
| d2csua1 | 129 | Acetate-CoA ligase alpha chain, AcdA, N-terminal d | 96.31 | |
| d2cvoa1 | 183 | Putative semialdehyde dehydrogenase {Rice (Oryza s | 96.3 | |
| d1ebda2 | 117 | Dihydrolipoamide dehydrogenase {Bacillus stearothe | 96.29 | |
| d1i36a2 | 152 | Conserved hypothetical protein MTH1747 {Archaeon M | 96.25 | |
| d1c0pa1 | 268 | D-aminoacid oxidase, N-terminal domain {Rhodotorul | 96.24 | |
| d2pgda2 | 176 | 6-phosphogluconate dehydrogenase {Sheep (Ovis orie | 96.23 | |
| d1onfa2 | 117 | Glutathione reductase {Plasmodium falciparum [TaxI | 96.22 | |
| d1jvba2 | 170 | Alcohol dehydrogenase {Archaeon Sulfolobus solfata | 96.21 | |
| d1nvta1 | 177 | Shikimate 5-dehydrogenase AroE {Archaeon Methanoco | 96.2 | |
| d1a9xa3 | 127 | Carbamoyl phosphate synthetase (CPS), large subuni | 96.19 | |
| d2jhfa2 | 176 | Alcohol dehydrogenase {Horse (Equus caballus) [Tax | 96.15 | |
| d2g17a1 | 179 | N-acetyl-gamma-glutamyl-phosphate reductase ArgC { | 96.14 | |
| d2g5ca2 | 171 | Prephenate dehydrogenase TyrA {Aquifex aeolicus [T | 96.14 | |
| d2fzwa2 | 176 | Alcohol dehydrogenase {Human (Homo sapiens), diffe | 96.11 | |
| d1gesa2 | 116 | Glutathione reductase {Escherichia coli [TaxId: 56 | 96.09 | |
| d2fy8a1 | 129 | Potassium channel-related protein MthK {Archaeon M | 96.09 | |
| d3lada2 | 119 | Dihydrolipoamide dehydrogenase {Azotobacter vinela | 96.05 | |
| d1xhca2 | 122 | NADH oxidase /nitrite reductase {Pyrococcus furios | 96.03 | |
| d1li4a1 | 163 | S-adenosylhomocystein hydrolase {Human (Homo sapie | 96.02 | |
| d3etja2 | 78 | N5-carboxyaminoimidazole ribonucleotide synthetase | 96.0 | |
| d1p0fa2 | 174 | Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: | 95.99 | |
| d1q1ra2 | 133 | Putidaredoxin reductase {Pseudomonas putida [TaxId | 95.97 | |
| d1a9xa4 | 121 | Carbamoyl phosphate synthetase (CPS), large subuni | 95.9 | |
| d3grsa2 | 125 | Glutathione reductase {Human (Homo sapiens) [TaxId | 95.9 | |
| d1h2ba2 | 172 | Alcohol dehydrogenase {Archaeon Aeropyrum pernix [ | 95.89 | |
| d1d1ta2 | 176 | Alcohol dehydrogenase {Human (Homo sapiens), diffe | 95.89 | |
| d1lvla2 | 115 | Dihydrolipoamide dehydrogenase {Pseudomonas putida | 95.87 | |
| d1jw9b_ | 247 | Molybdenum cofactor biosynthesis protein MoeB {Esc | 95.84 | |
| d1obba1 | 171 | Alpha-glucosidase AglA {Thermotoga maritima [TaxId | 95.83 | |
| d2ahra2 | 152 | Pyrroline-5-carboxylate reductase ProC {Streptococ | 95.75 | |
| d1h6va2 | 122 | Mammalian thioredoxin reductase {Rat (Rattus norve | 95.7 | |
| d1qp8a1 | 181 | Putative formate dehydrogenase {Archaeon Pyrobacul | 95.69 | |
| d1vm6a3 | 128 | Dihydrodipicolinate reductase {Thermotoga maritima | 95.6 | |
| d1b0aa1 | 166 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 95.6 | |
| d1e3ia2 | 174 | Alcohol dehydrogenase {Mouse (Mus musculus), class | 95.54 | |
| d1diha1 | 162 | Dihydrodipicolinate reductase {Escherichia coli [T | 95.54 | |
| d1mo9a2 | 121 | NADH-dependent 2-ketopropyl coenzyme M oxidoreduct | 95.54 | |
| d1dxla2 | 123 | Dihydrolipoamide dehydrogenase {Garden pea (Pisum | 95.53 | |
| d1a4ia1 | 170 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 95.51 | |
| d2bi7a1 | 314 | UDP-galactopyranose mutase, N-terminal domain {Kle | 95.51 | |
| d1q0qa2 | 151 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase {E | 95.49 | |
| d1l7da1 | 183 | Nicotinamide nucleotide transhydrogenase dI compon | 95.37 | |
| d1kola2 | 195 | Formaldehyde dehydrogenase {Pseudomonas putida [Ta | 95.35 | |
| d1ojta2 | 125 | Dihydrolipoamide dehydrogenase {Neisseria meningit | 95.32 | |
| d1mx3a1 | 193 | Transcription corepressor CtbP {Human (Homo sapien | 95.26 | |
| d1gtea4 | 196 | Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su | 95.24 | |
| d1dlja2 | 196 | UDP-glucose dehydrogenase (UDPGDH) {Streptococcus | 95.24 | |
| d1kyqa1 | 150 | Bifunctional dehydrogenase/ferrochelatase Met8p, N | 95.23 | |
| d2gv8a1 | 335 | Flavin-dependent monoxygenase SPBP16F5.08c {Schizo | 95.22 | |
| d1ps9a3 | 179 | 2,4-dienoyl-CoA reductase, middle domain {Escheric | 95.22 | |
| d1yl7a1 | 135 | Dihydrodipicolinate reductase {Mycobacterium tuber | 95.21 | |
| d1pgja2 | 178 | 6-phosphogluconate dehydrogenase {Trypanosoma bruc | 95.19 | |
| d1yovb1 | 426 | UBA3 {Human (Homo sapiens) [TaxId: 9606]} | 95.18 | |
| d1ryia1 | 276 | Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]} | 95.11 | |
| d1llua2 | 166 | Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax | 95.08 | |
| d1v8ba1 | 163 | S-adenosylhomocystein hydrolase {Plasmodium falcip | 95.04 | |
| d1j6ua1 | 89 | UDP-N-acetylmuramate-alanine ligase MurC {Thermoto | 95.04 | |
| d1edza1 | 171 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 94.91 | |
| d1seza1 | 373 | Protoporphyrinogen oxidase {Tobacco (Nicotiana tab | 94.83 | |
| d2voua1 | 265 | Dihydroxypyridine hydroxylase DhpH {Arthrobacter n | 94.81 | |
| d2gz1a1 | 154 | Aspartate beta-semialdehyde dehydrogenase {Strepto | 94.71 | |
| d1yqga2 | 152 | Pyrroline-5-carboxylate reductase ProC {Neisseria | 94.69 | |
| d1u8xx1 | 167 | Maltose-6'-phosphate glucosidase GlvA {Bacillus su | 94.64 | |
| d1j4aa1 | 197 | D-lactate dehydrogenase {Lactobacillus helveticus | 94.57 | |
| d1fcda1 | 186 | Flavocytochrome c sulfide dehydrogenase, FCSD, fla | 94.46 | |
| d1cdoa2 | 175 | Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI | 94.2 | |
| d1rjwa2 | 168 | Alcohol dehydrogenase {Bacillus stearothermophilus | 94.18 | |
| d1gdha1 | 191 | D-glycerate dehydrogenase {Hyphomicrobium methylov | 94.0 | |
| d1f06a1 | 170 | Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb | 93.97 | |
| d1djqa3 | 233 | Trimethylamine dehydrogenase, middle domain {Methy | 93.95 | |
| d1ygya1 | 184 | Phosphoglycerate dehydrogenase {Mycobacterium tube | 93.94 | |
| d1hwxa1 | 293 | Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: | 93.91 | |
| d2ivda1 | 347 | Protoporphyrinogen oxidase {Myxococcus xanthus [Ta | 93.8 | |
| d1dxya1 | 199 | D-2-hydroxyisocaproate dehydrogenase {Lactobacillu | 93.78 | |
| d1k0ia1 | 292 | p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a | 93.78 | |
| d1djqa2 | 156 | Trimethylamine dehydrogenase, C-terminal domain {M | 93.71 | |
| d1nvmb1 | 157 | Acetaldehyde dehydrogenase (acylating) {Pseudomona | 93.62 | |
| d1q1ra1 | 185 | Putidaredoxin reductase {Pseudomonas putida [TaxId | 93.62 | |
| d1y81a1 | 116 | Hypothetical protein PF0725 {Pyrococcus furiosus [ | 93.6 | |
| d2dt5a2 | 126 | Transcriptional repressor Rex, C-terminal domain { | 93.56 | |
| d1sc6a1 | 188 | Phosphoglycerate dehydrogenase {Escherichia coli [ | 93.44 | |
| d2naca1 | 188 | Formate dehydrogenase {Pseudomonas sp., strain 101 | 93.43 | |
| d1leha1 | 230 | Leucine dehydrogenase {Bacillus sphaericus [TaxId: | 93.42 | |
| d1i8ta1 | 298 | UDP-galactopyranose mutase, N-terminal domain {Esc | 93.37 | |
| d2iida1 | 370 | L-aminoacid oxidase {Malayan pit viper (Calloselas | 93.3 | |
| d1c1da1 | 201 | Phenylalanine dehydrogenase {Rhodococcus sp., M4 [ | 93.3 | |
| d2d59a1 | 139 | Hypothetical protein PH1109 {Pyrococcus horikoshii | 93.25 | |
| d1v9la1 | 242 | Glutamate dehydrogenase {Pyrobaculum islandicum [T | 93.05 | |
| d1aoga2 | 117 | Trypanothione reductase {Trypanosoma cruzi [TaxId: | 93.02 | |
| d2blna2 | 203 | Polymyxin resistance protein ArnA, N-terminal doma | 92.92 | |
| d1gsoa2 | 105 | Glycinamide ribonucleotide synthetase (GAR-syn), N | 92.86 | |
| d2gf3a1 | 281 | Sarcosine oxidase {Bacillus sp., strain b0618 [Tax | 92.74 | |
| d1s6ya1 | 169 | 6-phospho-beta-glucosidase {Bacillus stearothermop | 92.66 | |
| d1yova1 | 529 | Amyloid beta precursor protein-binding protein 1, | 92.55 | |
| d1r0ka2 | 150 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z | 92.46 | |
| d2bcgg1 | 297 | Guanine nucleotide dissociation inhibitor, GDI {Ba | 92.16 | |
| d1pj5a2 | 305 | N,N-dimethylglycine oxidase {Arthrobacter globifor | 92.0 | |
| d1feca2 | 117 | Trypanothione reductase {Crithidia fasciculata [Ta | 91.97 | |
| d2dw4a2 | 449 | Lysine-specific histone demethylase 1, LSD1 {Human | 91.84 | |
| d1d7ya1 | 183 | NADH-dependent ferredoxin reductase, BphA4 {Pseudo | 91.73 | |
| d1nhpa1 | 198 | NADH peroxidase {Enterococcus faecalis [TaxId: 135 | 91.21 | |
| d1b7go1 | 178 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 90.72 | |
| d1m6ia2 | 137 | Apoptosis-inducing factor (AIF) {Human (Homo sapie | 90.65 | |
| d1kifa1 | 246 | D-aminoacid oxidase, N-terminal domain {Pig (Sus s | 90.64 | |
| d3c96a1 | 288 | Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: | 90.57 | |
| d1b5qa1 | 347 | Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]} | 90.41 | |
| d1xhca1 | 167 | NADH oxidase /nitrite reductase {Pyrococcus furios | 90.19 | |
| d2czca2 | 172 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 90.03 | |
| d1gtma1 | 239 | Glutamate dehydrogenase {Archaeon Pyrococcus furio | 89.38 | |
| d2cvza2 | 156 | Hydroxyisobutyrate dehydrogenase {Thermus thermoph | 89.26 | |
| d1up7a1 | 162 | 6-phospho-beta-glucosidase {Thermotoga maritima [T | 89.17 | |
| d1bgva1 | 255 | Glutamate dehydrogenase {Clostridium symbiosum [Ta | 89.06 | |
| d2v5za1 | 383 | Monoamine oxidase B {Human (Homo sapiens) [TaxId: | 88.96 | |
| d1d5ta1 | 336 | Guanine nucleotide dissociation inhibitor, GDI {Co | 88.92 | |
| d1w4xa1 | 298 | Phenylacetone monooxygenase {Thermobifida fusca [T | 88.69 | |
| d2i0za1 | 251 | Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396] | 88.66 | |
| d2gqfa1 | 253 | Hypothetical protein HI0933 {Haemophilus influenza | 88.64 | |
| d2gv8a2 | 107 | Flavin-dependent monoxygenase SPBP16F5.08c {Schizo | 88.02 | |
| d1gtea3 | 153 | Dihydropyrimidine dehydrogenase, domain 3 {Pig (Su | 87.97 | |
| d1p9oa_ | 290 | Phosphopantothenoylcysteine synthetase {Human (Hom | 87.35 | |
| d1b26a1 | 234 | Glutamate dehydrogenase {Thermotoga maritima [TaxI | 87.27 | |
| d2bw0a2 | 203 | 10-formyltetrahydrofolate dehydrogenase domain 1 { | 86.82 | |
| d1j5pa4 | 132 | Hypothetical protein TM1643 {Thermotoga maritima [ | 86.7 | |
| d1cp2a_ | 269 | Nitrogenase iron protein {Clostridium pasteurianum | 86.64 | |
| d1fmta2 | 206 | Methionyl-tRNAfmet formyltransferase {Escherichia | 86.63 | |
| d1dl5a1 | 213 | Protein-L-isoaspartyl O-methyltransferase {Thermot | 86.4 | |
| d1cjca2 | 230 | Adrenodoxin reductase of mitochondrial p450 system | 85.5 | |
| d1pn0a1 | 360 | Phenol hydroxylase {Soil-living yeast (Trichosporo | 85.44 | |
| d1cf2o1 | 171 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 85.01 | |
| d1hyqa_ | 232 | Cell division regulator MinD {Archaeon Archaeoglob | 85.0 | |
| d1trba1 | 190 | Thioredoxin reductase {Escherichia coli [TaxId: 56 | 84.95 | |
| d1n4wa1 | 367 | Cholesterol oxidase of GMC family {Streptomyces sp | 84.92 | |
| d1gesa1 | 217 | Glutathione reductase {Escherichia coli [TaxId: 56 | 84.71 | |
| d1jg1a_ | 215 | Protein-L-isoaspartyl O-methyltransferase {Archaeo | 84.53 | |
| d1m6ya2 | 192 | TM0872, methyltransferase domain {Thermotoga marit | 84.52 | |
| d1x74a1 | 359 | 2-methylacyl-CoA racemase Mcr {Mycobacterium tuber | 84.48 | |
| d1y0pa2 | 308 | Flavocytochrome c3 (respiratory fumarate reductase | 84.16 | |
| d1uwva2 | 358 | rRNA (Uracil-5-)-methyltransferase RumA, catalytic | 83.7 | |
| d2bisa1 | 437 | Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI | 83.65 | |
| d1p3y1_ | 183 | MrsD {Bacillus sp. hil-y85/54728 [TaxId: 69002]} | 83.65 | |
| d1zh8a1 | 181 | Hypothetical protein TM0312 {Thermotoga maritima [ | 83.62 | |
| d1vl5a_ | 231 | Hypothetical protein BH2331 {Bacillus halodurans [ | 83.36 | |
| d1g3qa_ | 237 | Cell division regulator MinD {Archaeon Pyrococcus | 83.31 | |
| d1rp0a1 | 278 | Thiazole biosynthetic enzyme Thi4 {Thale cress(Ara | 83.06 | |
| d1ydwa1 | 184 | Probable oxidoreductase At4g09670 {Thale cress (Ar | 82.62 | |
| d1xk7a1 | 402 | Crotonobetainyl-CoA:carnitine CoA-transferase, Cai | 82.6 | |
| d1nt2a_ | 209 | Fibrillarin homologue {Archaeon Archaeoglobus fulg | 82.38 | |
| d1y8ca_ | 246 | Putative methyltransferase CAC2371 {Clostridium ac | 81.77 | |
| d1vdca1 | 192 | Thioredoxin reductase {Mouse-ear cress (Arabidopsi | 81.45 | |
| d1iuka_ | 136 | Hypothetical protein TT1466 {Thermus thermophilus | 81.18 | |
| d1dxla1 | 221 | Dihydrolipoamide dehydrogenase {Garden pea (Pisum | 81.1 | |
| d2fyta1 | 311 | Protein arginine N-methyltransferase 3, PRMT3 {Hum | 80.94 | |
| d1ve3a1 | 226 | Hypothetical protein PH0226 {Archaeon Pyrococcus h | 80.73 | |
| d1f0ka_ | 351 | Peptidoglycan biosynthesis glycosyltransferase Mur | 80.64 | |
| d2afhe1 | 289 | Nitrogenase iron protein {Azotobacter vinelandii [ | 80.32 | |
| d1qkia1 | 203 | Glucose 6-phosphate dehydrogenase, N-terminal doma | 80.22 | |
| d1cjca1 | 225 | Adrenodoxin reductase of mitochondrial p450 system | 80.14 |
| >d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=2.6e-54 Score=389.08 Aligned_cols=323 Identities=52% Similarity=0.929 Sum_probs=284.2
Q ss_pred CeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCCCE
Q 019795 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKFEA 84 (335)
Q Consensus 5 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~d~ 84 (335)
|+|||||||||||++|++.|+++|++|++++|.............+... +++.++++|++|.+.+.++++..++|+
T Consensus 1 MKiLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~----~~~~~~~~Dl~d~~~l~~~~~~~~~d~ 76 (338)
T d1udca_ 1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGG----KHPTFVEGDIRNEALMTEILHDHAIDT 76 (338)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHT----SCCEEEECCTTCHHHHHHHHHHTTCSE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHhhcC----CCCEEEEeecCCHHHHHHHHhccCCCE
Confidence 5799999999999999999999999999998865544433333333222 679999999999999999999888999
Q ss_pred EEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccCCCCCCCccCCC-CCCCCChhHHhHHHH
Q 019795 85 VIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQPEKIPCVEDF-PYGAMNPYGRTKQWC 163 (335)
Q Consensus 85 vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~-~~~~~~~Y~~sK~~~ 163 (335)
|||+|+......+.+++...+++|+.|+.+++++|++.+++++|++||.++|+.....+..|+. ...|.++|+.+|..+
T Consensus 77 ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nlL~~~~~~~v~~~i~~Ss~~vy~~~~~~~~~e~~~~~~p~~~Y~~sK~~~ 156 (338)
T d1udca_ 77 VIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMV 156 (338)
T ss_dssp EEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCCSSSBCTTSCCCCCSSHHHHHHHHH
T ss_pred EEECCCccchhhHHhCHHHHHHhHHHHHHHHHHHHHHhCCCEEEecCcceEEccccccccccccccCCCcchHHHHHhhh
Confidence 9999998877777788999999999999999999999999999999999999877665555554 557889999999999
Q ss_pred HHHHHHHHhhCCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHHHhCCCCceeEecccCCCCCCceeeeeeeH
Q 019795 164 EEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAVRDYIHV 243 (335)
Q Consensus 164 E~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~v~~ 243 (335)
|+++..+..++++++++++|++++||+++.+.+|+.+......+++.+...+.+....+.++|+.....++.+.|||+|+
T Consensus 157 e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~i~g~~~~~~~g~~~rd~i~v 236 (338)
T d1udca_ 157 EQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHV 236 (338)
T ss_dssp HHHHHHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCSSSTTSSCEECEEEH
T ss_pred hHHHHHHHhhccCCeEEEEeeccEEeccCCCCCCCCccccHHHHHHHHHHHHhcCCCCEEEeCCCcccCCCCceeeEEEE
Confidence 99999888777689999999999999999988888888878889998888777665548899987777789999999999
Q ss_pred hhhhc-------------cCceEEecCCccccHHHHHHHHHHHhCCCCCceeCCCCCCccceeeccHHHHHHhcCCcccc
Q 019795 244 MDLAD-------------GCIAYNLGNGKGISVLEMVAAFEKASGKKIPIKFCPRRVGDATAVYAATDKAHKELGWKPKY 310 (335)
Q Consensus 244 ~D~~~-------------~~~~~nv~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~d~~k~~~~Lg~~p~~ 310 (335)
+|++. .+++||+++++.+|+.|+++.+.+.+|.+.++.+.+..+.+.....+|++|+++.|||+|++
T Consensus 237 ~D~~~~~~~~~~~~~~~~~~~i~Ni~~~~~~si~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~d~~k~~~~lgwkp~~ 316 (338)
T d1udca_ 237 MDLADGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKACGKPVNYHFAPRREGDLPAYWADASKADRELNWRVTR 316 (338)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEEEESCSSCEEHHHHHHHHHHHHTSCCCEEEECCCTTCCSBCCBCCHHHHHHHCCCCCC
T ss_pred eehhhhccccccccccccCcceeeecCCCCCcHHHHHHHHHHHHCCCCceEECCCCCCCCCEeeECHHHHHHHHCCCcCC
Confidence 99985 35789999999999999999999999999888888887878888889999999999999999
Q ss_pred CHHHHHHHHHHHHhcCCCCcc
Q 019795 311 GIEDMCAHQWNWAKNNPMGYQ 331 (335)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~ 331 (335)
+++++|+++++|+++|+++|.
T Consensus 317 ~l~egi~~ti~w~~~~~~~~~ 337 (338)
T d1udca_ 317 TLDEMAQDTWHWQSRHPQGYP 337 (338)
T ss_dssp CHHHHHHHHHHHHHHCTTCSC
T ss_pred CHHHHHHHHHHHHHhchhhCC
Confidence 999999999999999998874
|
| >d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.5e-52 Score=376.33 Aligned_cols=326 Identities=54% Similarity=0.966 Sum_probs=283.0
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCC------CchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHH
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHN------SVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKL 76 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~------~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~ 76 (335)
|.|+|||||||||||++|+++|+++|++|+++++... ......+.+..... .++.++.+|++|.+.+.++
T Consensus 1 M~kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~Dl~d~~~l~~~ 76 (346)
T d1ek6a_ 1 MAEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTG----RSVEFEEMDILDQGALQRL 76 (346)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHT----CCCEEEECCTTCHHHHHHH
T ss_pred CCCeEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHHHHHhcC----CCcEEEEeecccccccccc
Confidence 3589999999999999999999999999999975322 22233333333322 6789999999999999999
Q ss_pred HhcCCCCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccCCCCCCCccCCC-CCCCCCh
Q 019795 77 FSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQPEKIPCVEDF-PYGAMNP 155 (335)
Q Consensus 77 ~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~-~~~~~~~ 155 (335)
+....+++++|+|+......+..++...+++|+.|+.++++++++.++++++++||+.+||........++. ...+.++
T Consensus 77 ~~~~~~~~i~h~Aa~~~~~~~~~~p~~~~~~Nv~gt~~l~~~~~~~~v~~~i~~ss~~~~~~~~~~~~~~~~~~~~~~~~ 156 (346)
T d1ek6a_ 77 FKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNP 156 (346)
T ss_dssp HHHCCEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSSH
T ss_pred ccccccccccccccccCcHhhHhCHHHHHHhhhcccccccchhhhcCcccccccccceeeeccccccccccccccccCCh
Confidence 988888999999999887788888999999999999999999999999999999999999887554444433 4567789
Q ss_pred hHHhHHHHHHHHHHHHhhCCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHHHhCCCCceeEecccCCCCCCc
Q 019795 156 YGRTKQWCEEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGS 235 (335)
Q Consensus 156 Y~~sK~~~E~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 235 (335)
|+.+|..+|+.+.++.+.+.+++.+++|++++||++....+|+........+++.+...+.+....+.++|+.....++.
T Consensus 157 Y~~~k~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~g~~~~~~~g~ 236 (346)
T d1ek6a_ 157 YGKSKFFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGT 236 (346)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSS
T ss_pred HHHHHHHHHHHHHHHHHhccCCceEEEeecceeccCCCCCcCccccccHHHHHHHHHHHHHcCCCcEEEcCCcccCCCCC
Confidence 99999999999999887766999999999999999988888888877788889988777776655588888877777899
Q ss_pred eeeeeeeHhhhhc-------------cCceEEecCCccccHHHHHHHHHHHhCCCCCceeCCCCCCccceeeccHHHHHH
Q 019795 236 AVRDYIHVMDLAD-------------GCIAYNLGNGKGISVLEMVAAFEKASGKKIPIKFCPRRVGDATAVYAATDKAHK 302 (335)
Q Consensus 236 ~~~~~v~~~D~~~-------------~~~~~nv~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~d~~k~~~ 302 (335)
+.|+|+|++|+|. .+++||+++++.+|+.|+++.|.+.+|.+.++.+.+.++.+.....+|++|+++
T Consensus 237 ~~Rdfi~v~D~a~~~~~~~~~~~~~~~~~i~Ni~~~~~~s~~dl~~~i~~~~~~~~~~~~~~~~~~e~~~~~~d~~k~~~ 316 (346)
T d1ek6a_ 237 GVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGKKIPYKVVARREGDVAACYANPSLAQE 316 (346)
T ss_dssp CEECEEEHHHHHHHHHHHHHHHTTTCCEEEEEECCSCCEEHHHHHHHHHHHHCSCCCEEEECCCTTCCSEECBCCHHHHH
T ss_pred eeEeEEEEEeccchhhhhccccccccCceEEEeCCCCcccHHHHHHHHHHHhCCCCCeEECCCCCCCCCEeeECHHHHHH
Confidence 9999999999985 456899999999999999999999999999988888888888888999999999
Q ss_pred hcCCccccCHHHHHHHHHHHHhcCCCCccc
Q 019795 303 ELGWKPKYGIEDMCAHQWNWAKNNPMGYQT 332 (335)
Q Consensus 303 ~Lg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 332 (335)
.|||+|+++++++|+++++|+++|+..||+
T Consensus 317 ~lgw~p~~slee~I~~~i~w~~~n~~~~~~ 346 (346)
T d1ek6a_ 317 ELGWTAALGLDRMCEDLWRWQKQNPSGFGT 346 (346)
T ss_dssp TTCCCCCCCHHHHHHHHHHHHHHCTTCSCC
T ss_pred HHCCCcCCCHHHHHHHHHHHHHhCHhhcCC
Confidence 999999999999999999999999999985
|
| >d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=7.6e-52 Score=374.25 Aligned_cols=324 Identities=49% Similarity=0.899 Sum_probs=268.7
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCCC
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKFE 83 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~d 83 (335)
.|.|||||||||||++|++.|+++|++|+++++................. .++.++.+|++|.+++.+++...++|
T Consensus 1 ~K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~~~~~~~~----~~v~~~~~Dl~d~~~l~~~~~~~~~d 76 (347)
T d1z45a2 1 SKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTK----HHIPFYEVDLCDRKGLEKVFKEYKID 76 (347)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHT----SCCCEEECCTTCHHHHHHHHHHSCCC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHHhHHhhcc----cCCeEEEeecCCHHHHHHHHhccCCC
Confidence 37899999999999999999999999999998765544333333332222 67899999999999999999888999
Q ss_pred EEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccCCC----CCCCccCCCCCCCCChhHHh
Q 019795 84 AVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQP----EKIPCVEDFPYGAMNPYGRT 159 (335)
Q Consensus 84 ~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~----~~~~~~e~~~~~~~~~Y~~s 159 (335)
+|||+|+........+.+..+..+|+.++.+++++|++.+++++|++||.++||.. ...+.+|+.+..|.++|+.+
T Consensus 77 ~VihlAa~~~~~~~~~~~~~~~~~N~~~t~~ll~~~~~~~i~~~i~~SS~~vyg~~~~~~~~~~~~e~~~~~p~~~Y~~s 156 (347)
T d1z45a2 77 SVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFSSSATVYGDATRFPNMIPIPEECPLGPTNPYGHT 156 (347)
T ss_dssp EEEECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCCGGGSTTCCSBCTTSCCCCCSHHHHH
T ss_pred EEEEccccccccccccCcccccccchhhhHHHHHHHHhcccceEEeecceeeecCcccCCCCCccccccCCCCCChhHhH
Confidence 99999999877777788889999999999999999999999999999999999864 33568888999999999999
Q ss_pred HHHHHHHHHHHHhhC-CCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHHHhCCCCceeEecccCCCCCCceee
Q 019795 160 KQWCEEIAFDVQKAD-PEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAVR 238 (335)
Q Consensus 160 K~~~E~~~~~~~~~~-~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 238 (335)
|.++|++++.+.+.. .+++++++|++++||+++...+|.........+++.+...+.+....+.++|+.....++...+
T Consensus 157 K~~~E~~~~~~~~~~~~~~~~~~lR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~i~g~~~~~~~~~~~~ 236 (347)
T d1z45a2 157 KYAIENILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDGTPIR 236 (347)
T ss_dssp HHHHHHHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC------CCSSCEE
T ss_pred HHHHHHHHHHHHHhhccCCcEEEEeecceEeecCCCccCCCccccHHHHHHHHHHHHhcCCCCeEEeCCCccccCCceee
Confidence 999999999887642 3789999999999999999999988888888899988887776554477888666566677778
Q ss_pred eeeeHhhhhc-----------------cCceEEecCCccccHHHHHHHHHHHhCCCCCceeCCCCCCccceeeccHHHHH
Q 019795 239 DYIHVMDLAD-----------------GCIAYNLGNGKGISVLEMVAAFEKASGKKIPIKFCPRRVGDATAVYAATDKAH 301 (335)
Q Consensus 239 ~~v~~~D~~~-----------------~~~~~nv~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~d~~k~~ 301 (335)
|++++.|.+. .+++||+++++++|+.|+++.+.+.+|.+.++...+.++.+.....+|++|++
T Consensus 237 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ni~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~d~sk~~ 316 (347)
T d1z45a2 237 DYIHVVDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGSTVFEVYHAFCKASGIDLPYKVTGRRAGDVLNLTAKPDRAK 316 (347)
T ss_dssp CEEEHHHHHHHHHHHHHHHHHSCTTCCEEEEEEESCSCCEEHHHHHHHHHHHHTCCCCC---------CCCCCBCCHHHH
T ss_pred eeeeeecccccccccccccccccccccccccceecCCCcccHHHHHHHHHHHHCCCCceEeCCCCCCCCCEeeECHHHHH
Confidence 8888887764 36789999999999999999999999999888877777777778889999999
Q ss_pred HhcCCccccCHHHHHHHHHHHHhcCCCCcc
Q 019795 302 KELGWKPKYGIEDMCAHQWNWAKNNPMGYQ 331 (335)
Q Consensus 302 ~~Lg~~p~~~~~~~~~~~~~~~~~~~~~~~ 331 (335)
++|||+|+++++++|+++++|+++|+.+|.
T Consensus 317 ~~lGw~p~~~lee~i~~ti~w~~~np~~~~ 346 (347)
T d1z45a2 317 RELKWQTELQVEDSCKDLWKWTTENPFGYQ 346 (347)
T ss_dssp HHTCCCCCCCHHHHHHHHHHHHHHCTTCSC
T ss_pred HHHCCCCCCCHHHHHHHHHHHHHhChhcCc
Confidence 999999999999999999999999998874
|
| >d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=5.7e-52 Score=376.38 Aligned_cols=305 Identities=23% Similarity=0.320 Sum_probs=244.7
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCch-hhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCC
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVP-EAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKF 82 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~ 82 (335)
.|+|||||||||||++|+++|+++|++|++++|...... ...+.+... .....++++++.+|++|.+++.++++...+
T Consensus 1 ~K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 79 (357)
T d1db3a_ 1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQD-PHTCNPKFHLHYGDLSDTSNLTRILREVQP 79 (357)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC----------------------CCEEECCCCSSCHHHHHHHHHHHCC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHHhh-hhhcCCCeEEEEeecCCHHHHHHHHhccCC
Confidence 488999999999999999999999999999998643211 111111110 012236899999999999999999997788
Q ss_pred CEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCC---CEEEEeccccccCCCCCCCccCCCCCCCCChhHHh
Q 019795 83 EAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNC---KKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRT 159 (335)
Q Consensus 83 d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~---~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~Y~~s 159 (335)
|+|+|+|+..+...+.+++..++++|+.||.+|+++|++.++ ++|||+||+++||.+...+++|+++..|.++|+.|
T Consensus 80 d~v~h~aa~~~~~~~~~~~~~~~~~Nv~gt~nllea~~~~~~~~~~r~i~~SS~~vYG~~~~~~~~E~~~~~P~~~Y~~s 159 (357)
T d1db3a_ 80 DEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVA 159 (357)
T ss_dssp SEEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTCCSSSBCTTSCCCCCSHHHHH
T ss_pred CEEEEeecccccchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEEchhhhCCCCCCCcCCCCCCCCCChHHHH
Confidence 999999999887778889999999999999999999998764 47999999999998888899999999999999999
Q ss_pred HHHHHHHHHHHHhhCCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHHHhCCCCceeEecccCCCCCCceeee
Q 019795 160 KQWCEEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAVRD 239 (335)
Q Consensus 160 K~~~E~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 239 (335)
|.++|++++.+.+.+ +++++++||++||||... .......+...+...+.+... ..++| ++.+.++
T Consensus 160 K~~~E~~~~~~~~~~-~l~~~ilR~~~vyGp~~~------~~~~~~~i~~~~~~~~~~~~~-~~~~g------~~~~~r~ 225 (357)
T d1db3a_ 160 KLYAYWITVNYRESY-GMYACNGILFNHESPRRG------ETFVTRKITRAIANIAQGLES-CLYLG------NMDSLRD 225 (357)
T ss_dssp HHHHHHHHHHHHHHH-CCCEEEEEECCEECTTSC------TTSHHHHHHHHHHHHHTTSCC-CEEES------CTTCEEC
T ss_pred HHHHHHHHHHHHHHh-CCCEEEEEeccccCCCCC------cCCCchHHHHHHHHHHhCCCc-eEEEC------CCCeeec
Confidence 999999999999888 899999999999999532 111233455677777777765 45677 7899999
Q ss_pred eeeHhhhhc---------cCceEEecCCccccHHHHHHHHHHHhCCCCCceeCC--------------------------
Q 019795 240 YIHVMDLAD---------GCIAYNLGNGKGISVLEMVAAFEKASGKKIPIKFCP-------------------------- 284 (335)
Q Consensus 240 ~v~~~D~~~---------~~~~~nv~~~~~~s~~el~~~i~~~~g~~~~~~~~~-------------------------- 284 (335)
|+|++|+++ .+++||+++++.+|+.|+++.+.+.+|...+....+
T Consensus 226 ~~~v~D~~~a~~~~~~~~~~~~yni~sg~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (357)
T d1db3a_ 226 WGHAKDYVKMQWMMLQQEQPEDFVIATGVQYSVRQFVEMAAAQLGIKLRFEGTGVEEKGIVVSVTGHDAPGVKPGDVIIA 305 (357)
T ss_dssp CEEHHHHHHHHHHTTSSSSCCCEEECCCCCEEHHHHHHHHHHTTTEEEEEESCGGGCEEEEEEECSSSCTTCCTTCEEEE
T ss_pred ceeechHHHHHHHHHhCCCCCeEEECCCCceehHHHHHHHHHHhCCccccccccccccchhhhhhcccccccccCceeEe
Confidence 999999997 578999999999999999999999998543221100
Q ss_pred -----CCCCccceeeccHHHHHHhcCCccccCHHHHHHHHHHHH
Q 019795 285 -----RRVGDATAVYAATDKAHKELGWKPKYGIEDMCAHQWNWA 323 (335)
Q Consensus 285 -----~~~~~~~~~~~d~~k~~~~Lg~~p~~~~~~~~~~~~~~~ 323 (335)
.++.+.....+|++|+++.|||+|+++|+++|++++++.
T Consensus 306 ~~~~~~r~~~~~~~~~d~skakk~LGw~P~~sl~egI~~~I~~~ 349 (357)
T d1db3a_ 306 VDPRYFRPAEVETLLGDPTKAHEKLGWKPEITLREMVSEMVAND 349 (357)
T ss_dssp ECGGGCCCCC-CCCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHH
T ss_pred eccccCCCccccccccCHHHHHHHHCCCcCCCHHHHHHHHHHHH
Confidence 022334556789999999999999999999999997653
|
| >d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-glucuronate decarboxylase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=9.3e-51 Score=361.72 Aligned_cols=292 Identities=26% Similarity=0.470 Sum_probs=242.8
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCCC
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKFE 83 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~d 83 (335)
.|+|||||||||||++|+++|+++|++|+++++.............. ...+.+...|+.+ .++. ++|
T Consensus 1 kKKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~------~~~~d~~~~~~~~-----~~~~--~~d 67 (312)
T d2b69a1 1 RKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIG------HENFELINHDVVE-----PLYI--EVD 67 (312)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGTT------CTTEEEEECCTTS-----CCCC--CCS
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCCcCCHHHHHHhcC------CCceEEEehHHHH-----HHHc--CCC
Confidence 48999999999999999999999999999998754433322221111 1345555555543 3444 799
Q ss_pred EEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccCCCCCCCccCC-----CCCCCCChhHH
Q 019795 84 AVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQPEKIPCVED-----FPYGAMNPYGR 158 (335)
Q Consensus 84 ~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~e~-----~~~~~~~~Y~~ 158 (335)
+|||+|+......+..++...+++|+.|+.+++++|++.++ ++||+||+++||.....+.+|+ +|..|.++|+.
T Consensus 68 ~VihlAa~~~~~~~~~~~~~~~~~Nv~g~~~ll~~~~~~~~-k~I~~SS~~vy~~~~~~~~~e~~~~~~~~~~p~~~Y~~ 146 (312)
T d2b69a1 68 QIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGA-RLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDE 146 (312)
T ss_dssp EEEECCSCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTC-EEEEEEEGGGGBSCSSSSBCTTCCCBCCSSSTTHHHHH
T ss_pred EEEECcccCCchhHHhCHHHHHHHHHHHHHHHHHHHHHcCC-cEEEEEChheecCCCCCCCCccccCCCCCCCCccHHHH
Confidence 99999998777667788999999999999999999999986 8999999999998766666665 46678889999
Q ss_pred hHHHHHHHHHHHHhhCCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHH-HHHHHHhCCCCceeEecccCCCCCCcee
Q 019795 159 TKQWCEEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMP-YIQQVAVGRHPELNVYGQDYPTKDGSAV 237 (335)
Q Consensus 159 sK~~~E~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 237 (335)
+|.++|.+++.+++.+ +++++++||++||||+.... ...+++ ++.+++.|+ + +.++| ++.+.
T Consensus 147 sK~~~E~~~~~~~~~~-~~~~~~lR~~~vyGp~~~~~--------~~~~i~~~i~~~~~g~-~-i~i~~------~g~~~ 209 (312)
T d2b69a1 147 GKRVAETMCYAYMKQE-GVEVRVARIFNTFGPRMHMN--------DGRVVSNFILQALQGE-P-LTVYG------SGSQT 209 (312)
T ss_dssp HHHHHHHHHHHHHHHH-CCCEEEEEECCEECTTCCTT--------CCCHHHHHHHHHHHTC-C-EEEES------SSCCE
T ss_pred HHHHHHHHHHHHHHHh-CCcEEEEEeeeEECCCCCCC--------CccHHHHHHHHHHcCC-C-eEEeC------CCCee
Confidence 9999999999999888 99999999999999964311 233555 455666665 4 78888 89999
Q ss_pred eeeeeHhhhhc---------cCceEEecCCccccHHHHHHHHHHHhCCCCCceeCCCCCCccceeeccHHHHHHhcCCcc
Q 019795 238 RDYIHVMDLAD---------GCIAYNLGNGKGISVLEMVAAFEKASGKKIPIKFCPRRVGDATAVYAATDKAHKELGWKP 308 (335)
Q Consensus 238 ~~~v~~~D~~~---------~~~~~nv~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~d~~k~~~~Lg~~p 308 (335)
++|+|++|+++ .+++||+++++.+|+.++++.+.+.+|.+.++.+.+..+.+.....+|++|+++.|||+|
T Consensus 210 r~~i~v~D~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lgw~p 289 (312)
T d2b69a1 210 RAFQYVSDLVNGLVALMNSNVSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKKAKLMLGWEP 289 (312)
T ss_dssp EECEEHHHHHHHHHHHHTSSCCSCEEESCCCEEEHHHHHHHHHHHHTCCCCEEEECCCTTCCCCCCBCCHHHHHHHCCCC
T ss_pred EccEEHHHHHHHHHHHHhhccCCceEecCCcccchhhHHHHHHHHhCCCCceEECCCCCCCCCeeeECHHHHHHHHCCCC
Confidence 99999999998 578999999999999999999999999998888877777777788899999999999999
Q ss_pred ccCHHHHHHHHHHHHhcC
Q 019795 309 KYGIEDMCAHQWNWAKNN 326 (335)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~ 326 (335)
+++++++|+++++|++++
T Consensus 290 ~~~l~~~I~~~i~w~~~~ 307 (312)
T d2b69a1 290 VVPLEEGLNKAIHYFRKE 307 (312)
T ss_dssp CSCHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHH
Confidence 999999999999999875
|
| >d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-N-acetylglucosamine 4-epimerase WbpP species: Pseudomonas aeruginosa [TaxId: 287]
Probab=100.00 E-value=1.4e-49 Score=358.44 Aligned_cols=307 Identities=28% Similarity=0.400 Sum_probs=258.2
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCC
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQK 81 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~ 81 (335)
++.|+|||||||||||++|+++|+++|++|++++|.........+.+...........+.++.+|+.|...+..... .
T Consensus 14 ~~~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~--~ 91 (341)
T d1sb8a_ 14 AQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACA--G 91 (341)
T ss_dssp HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHT--T
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHHhhhhcccCCeeEEeeccccccccccccc--c
Confidence 35689999999999999999999999999999998665544444444333322223578999999999998888877 8
Q ss_pred CCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccCCCCCCCccCCCCCCCCChhHHhHH
Q 019795 82 FEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQ 161 (335)
Q Consensus 82 ~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~Y~~sK~ 161 (335)
++.|+|+++......+.+++...+++|+.|+.+++++|.+.+++++|++||+++||.....+.+|+++..|.+.|+.+|.
T Consensus 92 ~~~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~ 171 (341)
T d1sb8a_ 92 VDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASSSTYGDHPGLPKVEDTIGKPLSPYAVTKY 171 (341)
T ss_dssp CSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSSBCTTCCCCCCSHHHHHHH
T ss_pred ccccccccccccccccccCccchhheeehhHHHHHHHHHhcCCceEEEcccceeeCCCCCCCccCCCCCCCCCcchHHHH
Confidence 89999999988777788899999999999999999999999999999999999999988889999999999999999999
Q ss_pred HHHHHHHHHHhhCCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHHH-HHHHhCCCCceeEecccCCCCCCceeeee
Q 019795 162 WCEEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYI-QQVAVGRHPELNVYGQDYPTKDGSAVRDY 240 (335)
Q Consensus 162 ~~E~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 240 (335)
++|++++.+.+.+ +++++++||++|||++.. +......+++.+ ..++.|. + +.++| +|.+.++|
T Consensus 172 ~~E~~~~~~~~~~-~i~~~ilR~~~v~G~~~~------~~~~~~~~i~~~~~~~~~g~-~-i~~~g------~g~~~r~~ 236 (341)
T d1sb8a_ 172 VNELYADVFSRCY-GFSTIGLRYFNVFGRRQD------PNGAYAAVIPKWTSSMIQGD-D-VYING------DGETSRDF 236 (341)
T ss_dssp HHHHHHHHHHHHH-CCCCEEEEECCEECTTCC------CCSTTCCHHHHHHHHHHHTC-C-CEEES------SSCCEECC
T ss_pred HHHHHHHHHHHHh-CCCeEEEEeceeeccCcC------CCCchhhhHHHHHHHHHcCC-c-eEEcC------CCCEEEEE
Confidence 9999999998887 999999999999999543 222234466544 4455554 5 78888 89999999
Q ss_pred eeHhhhhc------------cCceEEecCCccccHHHHHHHHHHHhCCCC-----CceeCCCCCCccceeeccHHHHHHh
Q 019795 241 IHVMDLAD------------GCIAYNLGNGKGISVLEMVAAFEKASGKKI-----PIKFCPRRVGDATAVYAATDKAHKE 303 (335)
Q Consensus 241 v~~~D~~~------------~~~~~nv~~~~~~s~~el~~~i~~~~g~~~-----~~~~~~~~~~~~~~~~~d~~k~~~~ 303 (335)
+|++|++. .+++||+++++.+|+.|+++.|.+.++.+. .....+.++.+.....+|++|+++.
T Consensus 237 i~v~D~~~a~~~~~~~~~~~~~~~~~~~~~~~~si~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~ 316 (341)
T d1sb8a_ 237 CYIENTVQANLLAATAGLDARNQVYNIAVGGRTSLNQLFFALRDGLAENGVSYHREPVYRDFREGDVRHSLADISKAAKL 316 (341)
T ss_dssp EEHHHHHHHHHHHHTCCGGGCSEEEEESCSCCEEHHHHHHHHHHHHHHTTCCCCCCCEEECCCTTCCSBCCBCCHHHHHH
T ss_pred EEEeccchhhhhhhhccccccceeeeecccccchHHHHHHHHHHHhccccccccccccccCCCCCCcCeeeeCHHHHHHH
Confidence 99999886 477999999999999999999999987442 2222334555666778899999999
Q ss_pred cCCccccCHHHHHHHHHHHHhc
Q 019795 304 LGWKPKYGIEDMCAHQWNWAKN 325 (335)
Q Consensus 304 Lg~~p~~~~~~~~~~~~~~~~~ 325 (335)
|||+|+++++++|+++++||++
T Consensus 317 LGw~p~~sl~~gi~~ti~wy~~ 338 (341)
T d1sb8a_ 317 LGYAPKYDVSAGVALAMPWYIM 338 (341)
T ss_dssp TCCCCCCCHHHHHHHHHHHHHH
T ss_pred HCCCcCCCHHHHHHHHHHHHHH
Confidence 9999999999999999999986
|
| >d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptomyces venezuelae [TaxId: 54571]
Probab=100.00 E-value=3.5e-49 Score=353.08 Aligned_cols=298 Identities=26% Similarity=0.432 Sum_probs=251.3
Q ss_pred CeEEEEcCCChhhHHHHHHHHhCCCeE------EEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHh
Q 019795 5 KNILVTGGAGFIGTHCALQLLQGGFKV------VLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFS 78 (335)
Q Consensus 5 ~~vlItGatG~iG~~l~~~L~~~g~~V------~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~ 78 (335)
|+|||||||||||++|+++|+++|+.| +.++....... ...+... .....+.++.+|+.+.........
T Consensus 1 MkIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~--~~~~~~~---~~~~~~~~~~~d~~~~~~~~~~~~ 75 (322)
T d1r6da_ 1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGN--RANLAPV---DADPRLRFVHGDIRDAGLLARELR 75 (322)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCC--GGGGGGG---TTCTTEEEEECCTTCHHHHHHHTT
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCcccc--HhHhhhh---hcCCCeEEEEeccccchhhhcccc
Confidence 589999999999999999999999754 44443322111 1111111 112679999999999998888777
Q ss_pred cCCCCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccCCCCCCCccCCCCCCCCChhHH
Q 019795 79 SQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGR 158 (335)
Q Consensus 79 ~~~~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~Y~~ 158 (335)
.+|+|+|+|+.........++...+++|+.|+.+++++|++.+++++|++||+++||.....+++|+++..|.++|+.
T Consensus 76 --~~d~vi~~a~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~I~~Ss~~~yg~~~~~~~~E~~~~~p~~~Y~~ 153 (322)
T d1r6da_ 76 --GVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTNQVYGSIDSGSWTESSPLEPNSPYAA 153 (322)
T ss_dssp --TCCEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGCCCSSSCBCTTSCCCCCSHHHH
T ss_pred --ccceEEeecccccccccccchHHHhhhhHHHHHHHHHHHHHcCCceEEEeecceeecCCCCCCCCCCCCCCCCCHHHH
Confidence 899999999988777778888899999999999999999999999999999999999988889999999999999999
Q ss_pred hHHHHHHHHHHHHhhCCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHHHH-HHHhCCCCceeEecccCCCCCCcee
Q 019795 159 TKQWCEEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQ-QVAVGRHPELNVYGQDYPTKDGSAV 237 (335)
Q Consensus 159 sK~~~E~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~ 237 (335)
+|..+|.+++.+.+++ +++++++||++||||+.. ...+++.+. ++..++ + +.++| +|.+.
T Consensus 154 sK~~~E~~~~~~~~~~-~~~~~~lR~~~vyGp~~~----------~~~~i~~~i~~~~~~~-~-i~v~~------~g~~~ 214 (322)
T d1r6da_ 154 SKAGSDLVARAYHRTY-GLDVRITRCCNNYGPYQH----------PEKLIPLFVTNLLDGG-T-LPLYG------DGANV 214 (322)
T ss_dssp HHHHHHHHHHHHHHHH-CCCEEEEEECEEECTTCC----------TTSHHHHHHHHHHTTC-C-EEEET------TSCCE
T ss_pred HHHHHHHHHHHHHHHh-CCCEEEEEeeeEECcCCC----------cCcHHHHHHHHHHcCC-C-cEEec------CCCeE
Confidence 9999999999999888 999999999999998533 234666554 455544 5 78888 89999
Q ss_pred eeeeeHhhhhc----------cCceEEecCCccccHHHHHHHHHHHhCCCCCce-eCCCCCCccceeeccHHHHHHhcCC
Q 019795 238 RDYIHVMDLAD----------GCIAYNLGNGKGISVLEMVAAFEKASGKKIPIK-FCPRRVGDATAVYAATDKAHKELGW 306 (335)
Q Consensus 238 ~~~v~~~D~~~----------~~~~~nv~~~~~~s~~el~~~i~~~~g~~~~~~-~~~~~~~~~~~~~~d~~k~~~~Lg~ 306 (335)
|+|+|++|+|+ .+++||+++++.+|+.|+++.+.+.+|.+.+.. ..+..+.+.....+|++|+++.|||
T Consensus 215 r~~i~v~D~a~ai~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~ 294 (322)
T d1r6da_ 215 REWVHTDDHCRGIALVLAGGRAGEIYHIGGGLELTNRELTGILLDSLGADWSSVRKVADRKGHDLRYSLDGGKIERELGY 294 (322)
T ss_dssp EEEEEHHHHHHHHHHHHHHCCTTCEEEECCCCEEEHHHHHHHHHHHHTCCGGGEEEECCCTTCCCBCCBCCHHHHHHHCC
T ss_pred EccEEHHHHHHHHHHHHhCCCCCCeeEEeecccchhHHHHHHHHHHhCCCccceeecCCCCCCCceeeeCHHHHHHHHCC
Confidence 99999999998 578999999999999999999999999876543 4445566666778999999999999
Q ss_pred ccccCHHHHHHHHHHHHhcCCC
Q 019795 307 KPKYGIEDMCAHQWNWAKNNPM 328 (335)
Q Consensus 307 ~p~~~~~~~~~~~~~~~~~~~~ 328 (335)
+|+++++++|+++++|+++|+.
T Consensus 295 ~p~~~~eegI~~~i~w~~~n~~ 316 (322)
T d1r6da_ 295 RPQVSFADGLARTVRWYRENRG 316 (322)
T ss_dssp CCCSCHHHHHHHHHHHHHHCHH
T ss_pred CCCCCHHHHHHHHHHHHHHhHH
Confidence 9999999999999999999764
|
| >d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=100.00 E-value=2.3e-49 Score=359.60 Aligned_cols=299 Identities=25% Similarity=0.440 Sum_probs=244.4
Q ss_pred CeEEEEcCCChhhHHHHHHHHhCCCeEE-EEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCCC
Q 019795 5 KNILVTGGAGFIGTHCALQLLQGGFKVV-LIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKFE 83 (335)
Q Consensus 5 ~~vlItGatG~iG~~l~~~L~~~g~~V~-~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~d 83 (335)
|+|||||||||||++|+++|+++|++|+ ++++..... ....+.... ..+++.++.+|++|...+.++++...+|
T Consensus 1 MkILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~--~~~~~~~~~---~~~~~~~~~~Dl~d~~~l~~~~~~~~~d 75 (361)
T d1kewa_ 1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAG--NLESLSDIS---ESNRYNFEHADICDSAEITRIFEQYQPD 75 (361)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTC--CGGGGTTTT---TCTTEEEEECCTTCHHHHHHHHHHHCCS
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCccc--cHHHHHhhh---hcCCcEEEEccCCCHHHHHHHHHhCCCC
Confidence 4899999999999999999999998754 455432221 112222222 1368999999999999999999877899
Q ss_pred EEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcC---------CCEEEEeccccccCCCCCCC----------c
Q 019795 84 AVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYN---------CKKLVFSSSATIYGQPEKIP----------C 144 (335)
Q Consensus 84 ~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~---------~~~~v~~Ss~~vyg~~~~~~----------~ 144 (335)
+|||+|+......+..++..++++|+.|+.+++++|++.+ +++||++||+++||.....+ .
T Consensus 76 ~VihlAa~~~~~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~ 155 (361)
T d1kewa_ 76 AVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLF 155 (361)
T ss_dssp EEEECCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCB
T ss_pred EEEECccccchhhHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccceeeCCCccCCccccccCCCCc
Confidence 9999999987777788899999999999999999998754 35899999999998654322 3
Q ss_pred cCCCCCCCCChhHHhHHHHHHHHHHHHhhCCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHH-HHHHHhCCCCcee
Q 019795 145 VEDFPYGAMNPYGRTKQWCEEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPY-IQQVAVGRHPELN 223 (335)
Q Consensus 145 ~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~ 223 (335)
.|+.+..|.+.|+.+|.++|.++..+.+++ +++++++||++||||+.. ...+++. +.+++.|+ + +.
T Consensus 156 ~e~~~~~p~s~Yg~sK~~~E~~~~~~~~~~-~i~~~~lR~~~vyGp~~~----------~~~~i~~~i~~~~~g~-~-~~ 222 (361)
T d1kewa_ 156 TETTAYAPSSPYSASKASSDHLVRAWRRTY-GLPTIVTNCSNNYGPYHF----------PEKLIPLVILNALEGK-P-LP 222 (361)
T ss_dssp CTTSCCCCCSHHHHHHHHHHHHHHHHHHHH-CCCEEEEEECEEESTTCC----------TTSHHHHHHHHHHHTC-C-EE
T ss_pred ccCCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCEEEEecCceECcCCC----------cCcHHHHHHHHHHcCC-C-cE
Confidence 456677889999999999999999999888 999999999999998532 2346665 45555554 5 78
Q ss_pred EecccCCCCCCceeeeeeeHhhhhc----------cCceEEecCCccccHHHHHHHHHHHhCCC--------CCceeCCC
Q 019795 224 VYGQDYPTKDGSAVRDYIHVMDLAD----------GCIAYNLGNGKGISVLEMVAAFEKASGKK--------IPIKFCPR 285 (335)
Q Consensus 224 ~~g~~~~~~~~~~~~~~v~~~D~~~----------~~~~~nv~~~~~~s~~el~~~i~~~~g~~--------~~~~~~~~ 285 (335)
++| +|++.|+|+|++|+|+ .+++|||++++.+|+.|+++.+.+.++.. ..+...+.
T Consensus 223 v~g------~g~~~r~~i~v~D~a~ai~~~~~~~~~~~~~Ni~s~~~~s~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 296 (361)
T d1kewa_ 223 IYG------KGDQIRDWLYVEDHARALHMVVTEGKAGETYNIGGHNEKKNLDVVFTICDLLDEIVPKATSYREQITYVAD 296 (361)
T ss_dssp EET------TSCCEEEEEEHHHHHHHHHHHHHHCCTTCEEEECCCCEEEHHHHHHHHHHHHHHHSCCSSCGGGGEEEECC
T ss_pred EeC------CCCeEEeCEEHHHHHHHHHHHHhcCCCCCeEEECCCCCcchHHHHhHhhhhcccccccccCcccceeecCC
Confidence 888 8999999999999998 57899999999999999999999876422 23334455
Q ss_pred CCCccceeeccHHHHHHhcCCccccCHHHHHHHHHHHHhcCC
Q 019795 286 RVGDATAVYAATDKAHKELGWKPKYGIEDMCAHQWNWAKNNP 327 (335)
Q Consensus 286 ~~~~~~~~~~d~~k~~~~Lg~~p~~~~~~~~~~~~~~~~~~~ 327 (335)
++.+.....+|++|+++.|||+|+++++++|+++++|+++++
T Consensus 297 ~~~~~~~~~~d~~k~~~~lgw~P~~~l~e~i~~ti~w~~~n~ 338 (361)
T d1kewa_ 297 RPGHDRRYAIDAGKISRELGWKPLETFESGIRKTVEWYLANT 338 (361)
T ss_dssp CTTCCCBCCBCCHHHHHHHCCCCSCCHHHHHHHHHHHHHHCH
T ss_pred CCCCCceeeeCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHhH
Confidence 666777888999999999999999999999999999998874
|
| >d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=100.00 E-value=4e-48 Score=349.59 Aligned_cols=302 Identities=24% Similarity=0.369 Sum_probs=249.2
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCCC
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKFE 83 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~d 83 (335)
||+|||||||||||++|+++|+++|++|.+++++..+.......+.... +.++.++.+|++|.+.+..++. ..+
T Consensus 2 ~mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~~~~~~~~~----~~~i~~~~~Di~d~~~~~~~~~--~~~ 75 (346)
T d1oc2a_ 2 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAIL----GDRVELVVGDIADAELVDKLAA--KAD 75 (346)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGC----SSSEEEEECCTTCHHHHHHHHT--TCS
T ss_pred cCEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCccccHHHHHHhh----cCCeEEEEccCCCHHHHHHHHh--hhh
Confidence 7899999999999999999999999887666554332222222222222 2689999999999999999998 789
Q ss_pred EEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccCCC------------CCCCccCCCCCC
Q 019795 84 AVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQP------------EKIPCVEDFPYG 151 (335)
Q Consensus 84 ~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~------------~~~~~~e~~~~~ 151 (335)
.|+|+|+......+..++...+++|+.|+.+++++++..+ .++|++||+++||.. .....+|+++..
T Consensus 76 ~v~~~a~~~~~~~~~~~~~~~~~~N~~g~~nll~~~~~~~-~k~i~~ss~~vyg~~~~~~~~~~~~~~~~~~~~e~~~~~ 154 (346)
T d1oc2a_ 76 AIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYD-IRFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYN 154 (346)
T ss_dssp EEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHT-CEEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTTSCCC
T ss_pred hhhhhhhcccccchhhCcccceeeehHhHHhhhhhhcccc-ccccccccceEecccCccccccccccCcccccccCCCCC
Confidence 9999999887777778889999999999999999999988 489999999999842 124567778888
Q ss_pred CCChhHHhHHHHHHHHHHHHhhCCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHHHhCCCCceeEecccCCC
Q 019795 152 AMNPYGRTKQWCEEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPT 231 (335)
Q Consensus 152 ~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 231 (335)
|.+.|+.+|.++|.+++.+.+++ +++++++||++||||+.. ....+..++.....+.. +.++|
T Consensus 155 p~s~Y~~sK~~~E~~~~~~~~~~-~i~~~ilR~~~vyGp~~~---------~~~~~~~~i~~~~~~~~--~~i~~----- 217 (346)
T d1oc2a_ 155 PSSPYSSTKAASDLIVKAWVRSF-GVKATISNCSNNYGPYQH---------IEKFIPRQITNILAGIK--PKLYG----- 217 (346)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHH-CCEEEEEEECCEESTTCC---------TTSHHHHHHHHHHHTCC--CEEET-----
T ss_pred CCCHHHHHHHHHHHHHHHHHHHc-CCCEEEEeecceeCCCCC---------ccchhHHHHHHHHcCCc--eeEeC-----
Confidence 99999999999999999998888 999999999999998532 12334456666666665 57788
Q ss_pred CCCceeeeeeeHhhhhc----------cCceEEecCCccccHHHHHHHHHHHhCCCC-CceeCCCCCCccceeeccHHHH
Q 019795 232 KDGSAVRDYIHVMDLAD----------GCIAYNLGNGKGISVLEMVAAFEKASGKKI-PIKFCPRRVGDATAVYAATDKA 300 (335)
Q Consensus 232 ~~~~~~~~~v~~~D~~~----------~~~~~nv~~~~~~s~~el~~~i~~~~g~~~-~~~~~~~~~~~~~~~~~d~~k~ 300 (335)
++.+.++|+|++|+|+ .++.||+++++.+++.++++.|.+.++.+. .+...+.++.......+|++|+
T Consensus 218 -~g~~~r~~i~v~D~a~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~ 296 (346)
T d1oc2a_ 218 -EGKNVRDWIHTNDHSTGVWAILTKGRMGETYLIGADGEKNNKEVLELILEKMGQPKDAYDHVTDRAGHDLRYAIDASKL 296 (346)
T ss_dssp -TSCCEEECEEHHHHHHHHHHHHHHCCTTCEEEECCSCEEEHHHHHHHHHHHTTCCTTCSEEECCCTTCCCBCCBCCHHH
T ss_pred -CCCccccccchhhHHHHHHHHHhhcccCccccccccccccchHHHHHHHHHhCCCCcceEECCCCCCCCceeeeCHHHH
Confidence 8999999999999998 578999999999999999999999998764 3444555566666778899999
Q ss_pred HHhcCCcccc-CHHHHHHHHHHHHhcCCCCc
Q 019795 301 HKELGWKPKY-GIEDMCAHQWNWAKNNPMGY 330 (335)
Q Consensus 301 ~~~Lg~~p~~-~~~~~~~~~~~~~~~~~~~~ 330 (335)
++.|||+|++ +|+++|+++++|+++|+..|
T Consensus 297 ~~~LGw~P~~t~l~e~i~~ti~w~~~n~~~~ 327 (346)
T d1oc2a_ 297 RDELGWTPQFTDFSEGLEETIQWYTDNQDWW 327 (346)
T ss_dssp HHHHCCCCSCCCHHHHHHHHHHHHHHTHHHH
T ss_pred HHHHCCCCcCCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999997 69999999999999987644
|
| >d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=100.00 E-value=3.5e-47 Score=339.74 Aligned_cols=302 Identities=18% Similarity=0.243 Sum_probs=254.8
Q ss_pred CeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCCCE
Q 019795 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKFEA 84 (335)
Q Consensus 5 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~d~ 84 (335)
|+|||||||||||++|+++|+++||+|++++|...... ..++..+. ..+++.++.+|++|.+.+.+++....+++
T Consensus 1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~--~~~l~~~~---~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~ 75 (321)
T d1rpna_ 1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDT--RWRLRELG---IEGDIQYEDGDMADACSVQRAVIKAQPQE 75 (321)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCC--CHHHHHTT---CGGGEEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCccc--HHHHHHhc---ccCCcEEEEccccChHHhhhhhccccccc
Confidence 78999999999999999999999999999999765432 12222221 12678999999999999999998878899
Q ss_pred EEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCC-CEEEEeccccccCCCCCCCccCCCCCCCCChhHHhHHHH
Q 019795 85 VIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNC-KKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQWC 163 (335)
Q Consensus 85 vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~-~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~Y~~sK~~~ 163 (335)
++|+|+.........++..+++.|+.|+.+++++|++.+. +++++.||+.+||.....+.+|+++..|.+.|+.+|.++
T Consensus 76 ~~~~a~~~~~~~~~~~~~~~~~~n~~g~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~ 155 (321)
T d1rpna_ 76 VYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFGLIQAERQDENTPFYPRSPYGVAKLYG 155 (321)
T ss_dssp EEECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHH
T ss_pred cccccccccccccccchHHHHhhhhhchHHHHHHHHHhCCCcccccccchhhcCcccCCCCCCCCCccccChhHHHHHHH
Confidence 9999998877777788899999999999999999999875 578899999999988888899999999999999999999
Q ss_pred HHHHHHHHhhCCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHHHhCCCCceeEecccCCCCCCceeeeeeeH
Q 019795 164 EEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAVRDYIHV 243 (335)
Q Consensus 164 E~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~v~~ 243 (335)
|+++..+..++ +++++++||+++|||... .......+...+.+++.++.+ ...+| ++.+.|+|+|+
T Consensus 156 E~~~~~~~~~~-~~~~~~lr~~~vyGp~~~------~~~~~~~i~~~~~~~~~~~~~-~i~~g------~g~~~r~~i~v 221 (321)
T d1rpna_ 156 HWITVNYRESF-GLHASSGILFNHESPLRG------IEFVTRKVTDAVARIKLGKQQ-ELRLG------NVDAKRDWGFA 221 (321)
T ss_dssp HHHHHHHHHHH-CCCEEEEEECCEECTTSC------TTSHHHHHHHHHHHHHTTSCS-CEEES------CTTCEEECEEH
T ss_pred HHHHHHHHhhc-CCcEEEEEEecccCCCcc------ccccHHHHHHHHHHHHhCCCC-cEEEC------CCCeEEccEEe
Confidence 99999999888 899999999999998422 111123456677777887766 45677 79999999999
Q ss_pred hhhhc---------cCceEEecCCccccHHHHHHHHHHHhCCCCCcee----CCCCCCccceeeccHHHHHHhcCCcccc
Q 019795 244 MDLAD---------GCIAYNLGNGKGISVLEMVAAFEKASGKKIPIKF----CPRRVGDATAVYAATDKAHKELGWKPKY 310 (335)
Q Consensus 244 ~D~~~---------~~~~~nv~~~~~~s~~el~~~i~~~~g~~~~~~~----~~~~~~~~~~~~~d~~k~~~~Lg~~p~~ 310 (335)
+|+|+ ..+.||+++++.+|+.++++.+.+.+|.+.+... ...++.+......|++|+++.|||+|++
T Consensus 222 ~D~~~~~~~~~~~~~~~~~ni~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~rp~~~~~~~~d~~k~~k~lG~~P~~ 301 (321)
T d1rpna_ 222 GDYVEAMWLMLQQDKADDYVVATGVTTTVRDMCQIAFEHVGLDYRDFLKIDPAFFRPAEVDVLLGNPAKAQRVLGWKPRT 301 (321)
T ss_dssp HHHHHHHHHHHHSSSCCCEEECCSCEEEHHHHHHHHHHTTTCCGGGTEEECGGGCCSSCCCBCCBCTHHHHHHHCCCCCS
T ss_pred HHHHHHHHHHHhcCCcCCceecccccceehhhhHHHHHHhCCCccceeecCCCCCCCCccCCccCCHHHHHHHHCCCcCC
Confidence 99998 5788999999999999999999999987643222 2234566677888999999999999999
Q ss_pred CHHHHHHHHHHHHhc
Q 019795 311 GIEDMCAHQWNWAKN 325 (335)
Q Consensus 311 ~~~~~~~~~~~~~~~ 325 (335)
+++++|+++++|+.+
T Consensus 302 ~l~e~i~~tv~~~l~ 316 (321)
T d1rpna_ 302 SLDELIRMMVEADLR 316 (321)
T ss_dssp CHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHH
Confidence 999999999999876
|
| >d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose-3', 5'-epimerase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=100.00 E-value=7.9e-47 Score=343.22 Aligned_cols=299 Identities=21% Similarity=0.275 Sum_probs=244.7
Q ss_pred CCCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcC
Q 019795 1 MASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQ 80 (335)
Q Consensus 1 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~ 80 (335)
|-++|+|||||||||||++|+++|+++|++|+++++.+....... .....+..+|+++.+.+.++++
T Consensus 12 ~~~nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~-----------~~~~~~~~~D~~~~~~~~~~~~-- 78 (363)
T d2c5aa1 12 PSENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTED-----------MFCDEFHLVDLRVMENCLKVTE-- 78 (363)
T ss_dssp TTSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCGG-----------GTCSEEEECCTTSHHHHHHHHT--
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccchhhh-----------cccCcEEEeechhHHHHHHHhh--
Confidence 556899999999999999999999999999999987655422111 1456788899999999999887
Q ss_pred CCCEEEEcccccc-hhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccCCCCCCC-------ccCCCCCCC
Q 019795 81 KFEAVIHFGALKA-VAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQPEKIP-------CVEDFPYGA 152 (335)
Q Consensus 81 ~~d~vi~~a~~~~-~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~-------~~e~~~~~~ 152 (335)
++|+|||+|+... .......+...+..|+.++.+++++|++.+++++|++||+.+||.....+ ..|..+..|
T Consensus 79 ~~d~Vih~a~~~~~~~~~~~~~~~~~~~n~~gt~~ll~~~~~~~vk~~i~~SS~~~~~~~~~~~~~~~~~~~~e~~~~~p 158 (363)
T d2c5aa1 79 GVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEP 158 (363)
T ss_dssp TCSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEGGGSCGGGSSSSSSCEECGGGGSSBCC
T ss_pred cCCeEeecccccccccccccccccccccccchhhHHHHhHHhhCccccccccccccccccccccccccccccccCCcCCC
Confidence 8999999997653 33345777889999999999999999999999999999999998654433 334567788
Q ss_pred CChhHHhHHHHHHHHHHHHhhCCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHH-HHHHHHhCCCCceeEecccCCC
Q 019795 153 MNPYGRTKQWCEEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMP-YIQQVAVGRHPELNVYGQDYPT 231 (335)
Q Consensus 153 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~ 231 (335)
.+.|+.+|.++|++++.+.+++ +++++++||+++||++..... ....+.. ..........+ ...+|
T Consensus 159 ~~~Yg~sK~~~E~~~~~~~~~~-gl~~~ilR~~~vyG~~~~~~~------~~~~~~~~~~~~~~~~~~~-~~~~g----- 225 (363)
T d2c5aa1 159 QDAFGLEKLATEELCKHYNKDF-GIECRIGRFHNIYGPFGTWKG------GREKAPAAFCRKAQTSTDR-FEMWG----- 225 (363)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHH-CCEEEEEEECCEECTTSCCSS------SCCCHHHHHHHHHHHCSSC-EEEES-----
T ss_pred CCHHHHHHHHHHHHHHHHHHHh-CCCEEEEEeeeEeccCCcccc------ccccccccccccccccccc-ccccC-----
Confidence 9999999999999999999888 999999999999999643221 1222222 33333333333 67788
Q ss_pred CCCceeeeeeeHhhhhc---------cCceEEecCCccccHHHHHHHHHHHhCCCCCceeCCCCCCccceeeccHHHHHH
Q 019795 232 KDGSAVRDYIHVMDLAD---------GCIAYNLGNGKGISVLEMVAAFEKASGKKIPIKFCPRRVGDATAVYAATDKAHK 302 (335)
Q Consensus 232 ~~~~~~~~~v~~~D~~~---------~~~~~nv~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~d~~k~~~ 302 (335)
+|.+.|+|+|++|+++ .+++||+++++.+|+.|+++.+.+.+|.+.++...+.+ .+.....+|++|+++
T Consensus 226 -~g~~~rd~i~v~D~~~~~~~~~~~~~~~~~ni~~~~~~s~~~l~~~i~~~~g~~~~i~~~~~~-~~~~~~~~d~ska~~ 303 (363)
T d2c5aa1 226 -DGLQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEMVLSFEEKKLPIHHIPGP-EGVRGRNSDNNLIKE 303 (363)
T ss_dssp -CSCCEECCEEHHHHHHHHHHHHHSSCCSCEEECCCCCEEHHHHHHHHHHTTTCCCCEEEECCC-CCCSBCEECCHHHHH
T ss_pred -CCCeEEEEeehhHHHHHHHHHHhCCCCCeEEEecCCcccHHHHHHHHHHHhCCCCceEeCCCC-CCccccccCHHHHHH
Confidence 8999999999999987 57899999999999999999999999988887766543 345566789999999
Q ss_pred hcCCccccCHHHHHHHHHHHHhcCC
Q 019795 303 ELGWKPKYGIEDMCAHQWNWAKNNP 327 (335)
Q Consensus 303 ~Lg~~p~~~~~~~~~~~~~~~~~~~ 327 (335)
.|||+|+++++++|+++++|++++.
T Consensus 304 ~LGw~p~~sleegi~~ti~w~~~~~ 328 (363)
T d2c5aa1 304 KLGWAPNMRLKEGLRITYFWIKEQI 328 (363)
T ss_dssp HHSCCCCCCHHHHHHHHHHHHHHHH
T ss_pred HhCCCCCCCHHHHHHHHHHHHHHHH
Confidence 9999999999999999999998763
|
| >d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Trypanosoma brucei [TaxId: 5691]
Probab=100.00 E-value=3.8e-46 Score=341.11 Aligned_cols=324 Identities=39% Similarity=0.692 Sum_probs=260.4
Q ss_pred CCeEEEEcCCChhhHHHHHHHHh-CCCeEEEEecCCCC---------chhhHHhhhhh---cCCccccceeEEEccCCCH
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQ-GGFKVVLIDNLHNS---------VPEAVDRVKDL---AGPELAKKLEFHVGDLRNK 70 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~-~g~~V~~~~r~~~~---------~~~~~~~~~~~---~~~~~~~~i~~~~~Dl~d~ 70 (335)
.|+|||||||||||++|+++|++ .|++|+++++-..+ .......+... ........+.++.+|++|.
T Consensus 2 ~MKVLITG~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~ 81 (383)
T d1gy8a_ 2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE 81 (383)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred cCEEEEeCCCcHHHHHHHHHHHHhCCCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECcccCH
Confidence 46999999999999999999986 68999999752111 11111111111 1111235688999999999
Q ss_pred HHHHHHHhcC-CCCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccCCCCC-------C
Q 019795 71 DDLDKLFSSQ-KFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQPEK-------I 142 (335)
Q Consensus 71 ~~~~~~~~~~-~~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~-------~ 142 (335)
+.++++++.. .+|+|||+|+..........+...++.|+.++.++++++++.++++++++||..+|+.... .
T Consensus 82 ~~l~~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~~~~N~~~t~~~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~ 161 (383)
T d1gy8a_ 82 DFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSSAAIFGNPTMGSVSTNAE 161 (383)
T ss_dssp HHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGTBSCCC-----CCC
T ss_pred HHhhhhhhccceeehhhcccccccccccccccccccccccccccccchhhhccCCccccccccccccccccccccccccc
Confidence 9999999754 5699999999877777778888899999999999999999999999999999999875432 4
Q ss_pred CccCCCCCCCCChhHHhHHHHHHHHHHHHhhCCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHHHh------
Q 019795 143 PCVEDFPYGAMNPYGRTKQWCEEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAV------ 216 (335)
Q Consensus 143 ~~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~------ 216 (335)
+..|+.+..|.++|+.+|..+|++++.+.+.+ +++++++||+++||+......... ......++|.+...+.
T Consensus 162 ~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~-gl~~~~lR~~~vyG~~~~~~~~~~-~~~~~~~ip~ii~~~~~~~~~~ 239 (383)
T d1gy8a_ 162 PIDINAKKSPESPYGESKLIAERMIRDCAEAY-GIKGICLRYFNACGAHEDGDIGEH-YQGSTHLIPIILGRVMSDIAPD 239 (383)
T ss_dssp CBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHH-CCEEEEEEECEEECCCTTSSCSCC-STTCCSHHHHHHHHHHHHHSCC
T ss_pred ccccccCCCCCCHHHhhHhHHHHHHHHHHHHh-CCCEEEEecceeeccCcccccccc-ccccchhHHHHHHHHHhhcccc
Confidence 57778888999999999999999999998888 999999999999999754322111 1113345554322211
Q ss_pred ----------CCCCceeEecccCCCCCCceeeeeeeHhhhhc-------------------cCceEEecCCccccHHHHH
Q 019795 217 ----------GRHPELNVYGQDYPTKDGSAVRDYIHVMDLAD-------------------GCIAYNLGNGKGISVLEMV 267 (335)
Q Consensus 217 ----------~~~~~~~~~g~~~~~~~~~~~~~~v~~~D~~~-------------------~~~~~nv~~~~~~s~~el~ 267 (335)
...+ +.++|+....++|.+.|+|+|++|+++ ..++||+++++++|+.|++
T Consensus 240 ~~~~~~~~~~~~~~-~~i~g~~~~~~dg~~~Rdfi~v~D~~~a~~~~~~~~~~~~~~~~~~~~~i~Ni~s~~~~s~~el~ 318 (383)
T d1gy8a_ 240 QRLTIHEDASTDKR-MPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFSVFNLGTSRGYSVREVI 318 (383)
T ss_dssp -----------CCC-EEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHTCCTTTGGGSEEEEEESCSCCEEHHHHH
T ss_pred ccchhhhhhhcCCc-eEEeCCccccCCCCeEEeeEEHHHHHHHHHHHHhhhccccccccccCccEEEeCCCCceeHHHHH
Confidence 1223 678888888889999999999999986 2478999999999999999
Q ss_pred HHHHHHhCCCCCceeCCCCCCccceeeccHHHHHHhcCCccccCHHHHHHHH-HHHHhcCCCCc
Q 019795 268 AAFEKASGKKIPIKFCPRRVGDATAVYAATDKAHKELGWKPKYGIEDMCAHQ-WNWAKNNPMGY 330 (335)
Q Consensus 268 ~~i~~~~g~~~~~~~~~~~~~~~~~~~~d~~k~~~~Lg~~p~~~~~~~~~~~-~~~~~~~~~~~ 330 (335)
+.+.+.+|.+.++...+.++.+.....+|++|+++.|||+|+++++++|.++ +.|+++|+.+|
T Consensus 319 ~~i~~~~~~~~~~~~~~~~~~d~~~~~~d~~k~~k~LGw~P~~~l~e~i~~t~~~w~~~~~~~~ 382 (383)
T d1gy8a_ 319 EVARKTTGHPIPVRECGRREGDPAYLVAASDKAREVLGWKPKYDTLEAIMETSWKFQRTHPNGY 382 (383)
T ss_dssp HHHHHHHCCCCCEEEECCCTTCCSEECBCCHHHHHHTCCCCSCCSHHHHHHHHHHHHHTCTTTT
T ss_pred HHHHHHhCCCCceEECCCCCCCcCEeeeCHHHHHHHHCCccCCCHHHHHHHHHHHHHHhCcccC
Confidence 9999999999988888888888888899999999999999999999999886 79999998877
|
| >d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.2e-46 Score=339.86 Aligned_cols=306 Identities=22% Similarity=0.283 Sum_probs=245.6
Q ss_pred CeE-EEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCch-hhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCC
Q 019795 5 KNI-LVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVP-EAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKF 82 (335)
Q Consensus 5 ~~v-lItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~ 82 (335)
|+| ||||||||||++|+++|+++||+|++++|...+.. ...+.+..........+++++.+|++|.+.+..++....+
T Consensus 1 kKI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 80 (347)
T d1t2aa_ 1 RNVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKP 80 (347)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHHCC
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHhhchhhhccCCcEEEEeecCCchhhHHHHhhccc
Confidence 567 99999999999999999999999999999654321 1111111111112235789999999999999999988889
Q ss_pred CEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCC---CEEEEeccccccCCCCCCCccCCCCCCCCChhHHh
Q 019795 83 EAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNC---KKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRT 159 (335)
Q Consensus 83 d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~---~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~Y~~s 159 (335)
++++|+|+......+...+...+++|+.||.+++++|+++++ +++|++||+++||.....+++|+++..|.++|+.|
T Consensus 81 ~~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~P~~~Yg~s 160 (347)
T d1t2aa_ 81 TEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAA 160 (347)
T ss_dssp SEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCSCSSSSBCTTSCCCCCSHHHHH
T ss_pred ceeeeeeeccccchhhccchhhhhhHHHHHHHHHHHHHHcCCCCCcEEEEecchheecCCCCCCCCCCCCCCCCCHHHHH
Confidence 999999998877777888888999999999999999998864 48999999999998888899999999999999999
Q ss_pred HHHHHHHHHHHHhhCCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHHHhCCCCceeEecccCCCCCCceeee
Q 019795 160 KQWCEEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAVRD 239 (335)
Q Consensus 160 K~~~E~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 239 (335)
|.++|++++.+.+++ +++++++||+++|||... .......+...+.....+..+ +.++| ++.+.++
T Consensus 161 K~~aE~~~~~~~~~~-~~~~~ilr~~~vyGp~~~------~~~~~~~~~~~i~~~~~~~~~-~~~~g------~g~~~r~ 226 (347)
T d1t2aa_ 161 KLYAYWIVVNFREAY-NLFAVNGILFNHESPRRG------ANFVTRKISRSVAKIYLGQLE-CFSLG------NLDAKRD 226 (347)
T ss_dssp HHHHHHHHHHHHHHH-CCEEEEEEECCEECTTSC------TTSHHHHHHHHHHHHHHTSCS-CEEES------CTTCEEC
T ss_pred HHHHHHHHHHHHHHh-CCCEEEEEecceeCCCCC------CCccccccceeeehhhcCCcc-eeecC------CCcceee
Confidence 999999999998887 999999999999998532 111123344455566666665 67788 8999999
Q ss_pred eeeHhhhhc---------cCceEEecCCccccHHHHHHHHHHHhCCCCCceeCC---------------------CCCCc
Q 019795 240 YIHVMDLAD---------GCIAYNLGNGKGISVLEMVAAFEKASGKKIPIKFCP---------------------RRVGD 289 (335)
Q Consensus 240 ~v~~~D~~~---------~~~~~nv~~~~~~s~~el~~~i~~~~g~~~~~~~~~---------------------~~~~~ 289 (335)
|+|++|+++ ..+.|+++.+...++.+..+.+...++........+ .++.+
T Consensus 227 ~i~v~D~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rp~~ 306 (347)
T d1t2aa_ 227 WGHAKDYVEAMWLMLQNDEPEDFVIATGEVHSVREFVEKSFLHIGKTIVWEGKNENEVGRCKETGKVHVTVDLKYYRPTE 306 (347)
T ss_dssp CEEHHHHHHHHHHHHHSSSCCCEEECCSCCEEHHHHHHHHHHHTTCCEEEESCGGGCEEEETTTCCEEEEECGGGSCSSC
T ss_pred eeEecHHHHHHHHHhhcCCCccceeccccccccchhhhhhhhhhcceeeecccchhhhhhhhhcCCceeeecccCCCCCC
Confidence 999999997 456899999999999999999999998764322111 12334
Q ss_pred cceeeccHHHHHHhcCCccccCHHHHHHHHHHHHh
Q 019795 290 ATAVYAATDKAHKELGWKPKYGIEDMCAHQWNWAK 324 (335)
Q Consensus 290 ~~~~~~d~~k~~~~Lg~~p~~~~~~~~~~~~~~~~ 324 (335)
...+.+|++|+++.|||+|+++|+++|+++++|..
T Consensus 307 ~~~~~~d~skak~~Lgw~P~~sl~e~i~~~I~~~~ 341 (347)
T d1t2aa_ 307 VDFLQGDCTKAKQKLNWKPRVAFDELVREMVHADV 341 (347)
T ss_dssp CCBCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHH
T ss_pred cCEeeECHHHHHHHHCCCcCCCHHHHHHHHHHHHH
Confidence 45667899999999999999999999999986543
|
| >d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Polymyxin resistance protein ArnA (PrmI) species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=1.7e-45 Score=331.74 Aligned_cols=301 Identities=19% Similarity=0.289 Sum_probs=240.0
Q ss_pred CeEEEEcCCChhhHHHHHHHHhCC-CeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHH-HHhcCCC
Q 019795 5 KNILVTGGAGFIGTHCALQLLQGG-FKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDK-LFSSQKF 82 (335)
Q Consensus 5 ~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~-~~~~~~~ 82 (335)
|+|||||||||||++|+++|+++| ++|+++++......... + .++++++.+|+++.+++.+ +++ ++
T Consensus 1 MKILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~----~------~~~~~~i~~Di~~~~~~~~~~~~--~~ 68 (342)
T d2blla1 1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL----N------HPHFHFVEGDISIHSEWIEYHVK--KC 68 (342)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGT----T------CTTEEEEECCTTTCSHHHHHHHH--HC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhc----c------CCCeEEEECccCChHHHHHHHHh--CC
Confidence 479999999999999999999998 68999987543322111 1 2679999999988766665 554 79
Q ss_pred CEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccCCCCCCCccCCC-------CCCCCCh
Q 019795 83 EAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQPEKIPCVEDF-------PYGAMNP 155 (335)
Q Consensus 83 d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~-------~~~~~~~ 155 (335)
|+|||+|+.........++...+.+|+.|+.+++++|.+.+. +++++||+.+|+........|.. ...|.+.
T Consensus 69 d~Vih~a~~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~-~~~~~ss~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 147 (342)
T d2blla1 69 DVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRK-RIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWI 147 (342)
T ss_dssp SEEEECBCCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTC-EEEEECCGGGGBTCCCSSBCTTTCCCBCCCTTCGGGH
T ss_pred CccccccccccccccccCCccccccccccccccccccccccc-cccccccccccccccccccccccccccccccCCCcch
Confidence 999999999877777888889999999999999999999985 66789999999887655544432 2345678
Q ss_pred hHHhHHHHHHHHHHHHhhCCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHHHhCCCCceeEecccCCCCCCc
Q 019795 156 YGRTKQWCEEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGS 235 (335)
Q Consensus 156 Y~~sK~~~E~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 235 (335)
|+.||.++|++++.+.+++ +++++++|++.+||+.....++.... ....+..++.+++.|+. +.++| +|.
T Consensus 148 Y~~sK~~~E~~~~~~~~~~-~~~~~i~r~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~--~~~~~------~g~ 217 (342)
T d2blla1 148 YSVSKQLLDRVIWAYGEKE-GLQFTLFRPFNWMGPRLDNLNAARIG-SSRAITQLILNLVEGSP--IKLID------GGK 217 (342)
T ss_dssp HHHHHHHHHHHHHHHHHHH-CCCEEEEEECSEECSSCCCTTCSBSC-BCHHHHHHHHHHHHTCC--EEEGG------GSC
T ss_pred hhhcccchhhhhhhhhccc-CceeEEeecccccccccccccccccc-ccccchHHHHHHHhCCC--ccccC------CCC
Confidence 9999999999999999988 99999999999999976655543332 12224445667777764 67888 899
Q ss_pred eeeeeeeHhhhhc-------------cCceEEecCCc-cccHHHHHHHHHHHhCCCCCceeCCCCC--------------
Q 019795 236 AVRDYIHVMDLAD-------------GCIAYNLGNGK-GISVLEMVAAFEKASGKKIPIKFCPRRV-------------- 287 (335)
Q Consensus 236 ~~~~~v~~~D~~~-------------~~~~~nv~~~~-~~s~~el~~~i~~~~g~~~~~~~~~~~~-------------- 287 (335)
+.++|+|++|+|+ .+++||+++++ .+|+.|+++.+.+.++........+...
T Consensus 218 ~~r~~i~v~D~~~a~~~~~~~~~~~~~g~~~Nig~~~~~~t~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (342)
T d2blla1 218 QKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVESSSYYGKG 297 (342)
T ss_dssp CEEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECCTTSEEEHHHHHHHHHHHHHTCTTGGGSCCCCCEEEC---------
T ss_pred eeeeecccccccceeeeehhhccccCCCeEEEEecccchhHHHHHHHHHHHHhCCCccccccCcccccceeccccccccc
Confidence 9999999999987 36799998775 5899999999999998765554433221
Q ss_pred -CccceeeccHHHHHHhcCCccccCHHHHHHHHHHHHhcCCC
Q 019795 288 -GDATAVYAATDKAHKELGWKPKYGIEDMCAHQWNWAKNNPM 328 (335)
Q Consensus 288 -~~~~~~~~d~~k~~~~Lg~~p~~~~~~~~~~~~~~~~~~~~ 328 (335)
.+.....+|++|+++.|||+|+++++++|+++++||+++..
T Consensus 298 ~~~~~~~~~d~~k~~~~lgw~P~~sleegl~~ti~~y~~~~~ 339 (342)
T d2blla1 298 YQDVEHRKPSIRNAHRCLDWEPKIDMQETIDETLDFFLRTVD 339 (342)
T ss_dssp ---CCCCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHSC
T ss_pred cccccccccCHHHHHHHHCCCcCCCHHHHHHHHHHHHHhCcC
Confidence 12234567999999999999999999999999999998765
|
| >d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=4.6e-45 Score=325.10 Aligned_cols=289 Identities=20% Similarity=0.302 Sum_probs=234.8
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCC
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKF 82 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~ 82 (335)
+.|+|||||||||||++|+++|+++|+.|+++++.. ..|+.|.+.+.++++...+
T Consensus 1 ~kkkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~~-------------------------~~~~~~~~~~~~~~~~~~~ 55 (315)
T d1e6ua_ 1 AKQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD-------------------------ELNLLDSRAVHDFFASERI 55 (315)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT-------------------------TCCTTCHHHHHHHHHHHCC
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCcCEEEEecCch-------------------------hccccCHHHHHHHHhhcCC
Confidence 357999999999999999999999999988765421 1478899999999987789
Q ss_pred CEEEEccccc-chhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccCCCCCCCccCCCCCC-----CCChh
Q 019795 83 EAVIHFGALK-AVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQPEKIPCVEDFPYG-----AMNPY 156 (335)
Q Consensus 83 d~vi~~a~~~-~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~-----~~~~Y 156 (335)
|.|+|+|+.. .......++...++.|+.+|.+++++|++.+++++||+||.++||.....+++|+.+.. +.++|
T Consensus 56 d~v~~~a~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~v~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~~~~~~Y 135 (315)
T d1e6ua_ 56 DQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPY 135 (315)
T ss_dssp SEEEECCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGSCTTCCSSBCGGGTTSSCCCGGGHHH
T ss_pred CEEEEcchhccccccchhhHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCceEcCCCCCCCccCCccccCCCCCCCCHH
Confidence 9999998764 33345567778889999999999999999999999999999999988777888876543 34569
Q ss_pred HHhHHHHHHHHHHHHhhCCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHH-HHHHHHhCCCCceeEecccCCCCCCc
Q 019795 157 GRTKQWCEEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMP-YIQQVAVGRHPELNVYGQDYPTKDGS 235 (335)
Q Consensus 157 ~~sK~~~E~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~ 235 (335)
+.||.++|++++.+.+++ +++++++||++||||++.... ........+.. .......+..+ +.++| ++.
T Consensus 136 ~~sK~~~E~~~~~~~~~~-gl~~~ilR~~~vyGp~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~-~~~~g------~g~ 205 (315)
T d1e6ua_ 136 AIAKIAGIKLCESYNRQY-GRDYRSVMPTNLYGPHDNFHP--SNSHVIPALLRRFHEATAQKAPD-VVVWG------SGT 205 (315)
T ss_dssp HHHHHHHHHHHHHHHHHH-CCEEEEEEECEEESTTCCCCT--TCSSHHHHHHHHHHHHHHHTCSE-EEEES------CSC
T ss_pred HHHHHHHHHHHHHHHHHh-CCCEEEEeeccEECCCCCCCc--cccccceeeeccchhhhhccCCc-eEEcC------CCc
Confidence 999999999999999888 999999999999999643111 11110111111 22233333333 78888 889
Q ss_pred eeeeeeeHhhhhc-------------------cCceEEecCCccccHHHHHHHHHHHhCCCCCceeCCCCCCccceeecc
Q 019795 236 AVRDYIHVMDLAD-------------------GCIAYNLGNGKGISVLEMVAAFEKASGKKIPIKFCPRRVGDATAVYAA 296 (335)
Q Consensus 236 ~~~~~v~~~D~~~-------------------~~~~~nv~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~d 296 (335)
+.++|+|++|++. ....+|++++...++.++++.+.+.+|.+..+.+.+.++.+.....+|
T Consensus 206 ~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~i~~~~~~~~~i~~~~~~~~~~~~~~~d 285 (315)
T d1e6ua_ 206 PMREFLHVDDMAAASIHVMELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKGRVVFDASKPDGTPRKLLD 285 (315)
T ss_dssp CEECEEEHHHHHHHHHHHHHSCHHHHHHTSBTTBCCEEESCSCCEEHHHHHHHHHHHHTCCSEEEEETTSCCCCSBCCBC
T ss_pred eEEEEEEeehhHHHHHHhhhhccccccccccccccccccCCCcchHHHHHHHHHHHHhCCCcceEECCCCCCCCceeccC
Confidence 9999999999987 356899999999999999999999999988887777666676677899
Q ss_pred HHHHHHhcCCccccCHHHHHHHHHHHHhcCC
Q 019795 297 TDKAHKELGWKPKYGIEDMCAHQWNWAKNNP 327 (335)
Q Consensus 297 ~~k~~~~Lg~~p~~~~~~~~~~~~~~~~~~~ 327 (335)
++|++ .|||+|+++++++|+++++|+++|+
T Consensus 286 ~sk~k-~Lg~~p~~~l~e~i~~ti~w~~~N~ 315 (315)
T d1e6ua_ 286 VTRLH-QLGWYHEISLEAGLASTYQWFLENQ 315 (315)
T ss_dssp CHHHH-HTTCCCCCCHHHHHHHHHHHHHHTC
T ss_pred HHHHH-HcCCCCCCCHHHHHHHHHHHHHHcC
Confidence 99996 6999999999999999999999874
|
| >d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=100.00 E-value=1e-44 Score=326.01 Aligned_cols=308 Identities=19% Similarity=0.192 Sum_probs=243.8
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCc-hhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCC
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSV-PEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKF 82 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~ 82 (335)
.|++||||||||||+||+++|+++||+|++++|..... ....+.+...........+.++.+|+++.+.+.+.++..++
T Consensus 1 ~k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~ 80 (339)
T d1n7ha_ 1 RKIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVIKP 80 (339)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHHCC
T ss_pred CCEEEEeCCccHHHHHHHHHHHHCcCEEEEEECCCcccchhhhhhhhhhhhhccccceEEEEccccCHHHHHHHHhhhcc
Confidence 48999999999999999999999999999999964321 11111111100011125688999999999999999987789
Q ss_pred CEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHc-----CCCEEEEeccccccCCCCCCCccCCCCCCCCChhH
Q 019795 83 EAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKY-----NCKKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYG 157 (335)
Q Consensus 83 d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~-----~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~Y~ 157 (335)
|+|||+|+......+.+++...+..|+.++.+++++++.. ...++++.||+.+|+.. ..+.+|+.+..|.+.|+
T Consensus 81 D~Vih~Aa~~~~~~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~~~~~-~~~~~E~~~~~p~~~Y~ 159 (339)
T d1n7ha_ 81 DEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGST-PPPQSETTPFHPRSPYA 159 (339)
T ss_dssp SEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTS-CSSBCTTSCCCCCSHHH
T ss_pred chhhhccccccccccccCccccccccccccchhhhhhhhcccccccceeeeecccceecccC-CCCCCCCCCCCCcchhh
Confidence 9999999998777778899999999999999999998754 23468888888887654 35789999999999999
Q ss_pred HhHHHHHHHHHHHHhhCCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHHHhCCCCceeEecccCCCCCCcee
Q 019795 158 RTKQWCEEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAV 237 (335)
Q Consensus 158 ~sK~~~E~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 237 (335)
.+|..+|+++..+.+.+ +++++++||++||||... .......+...+.....+..+ ..++| ++.+.
T Consensus 160 ~sK~~~E~~~~~~~~~~-~~~~~ilR~~~vyGp~~~------~~~~~~~i~~~~~~~~~~~~~-~~~~g------~~~~~ 225 (339)
T d1n7ha_ 160 ASKCAAHWYTVNYREAY-GLFACNGILFNHESPRRG------ENFVTRKITRALGRIKVGLQT-KLFLG------NLQAS 225 (339)
T ss_dssp HHHHHHHHHHHHHHHHH-CCEEEEEEECCEECTTSC------TTSHHHHHHHHHHHHHHTSCC-CEEES------CTTCE
T ss_pred HHHHHHHHHHHHHHHHh-CCCEEEEEEccccCCCCC------CCCCcchhhHHHHHHhcCCCC-eEEeC------CCCcc
Confidence 99999999999999888 999999999999998532 111123344455566666665 45667 78999
Q ss_pred eeeeeHhhhhc---------cCceEEecCCccccHHHHHHHHHHHhCCCCCce----eCCCCCCccceeeccHHHHHHhc
Q 019795 238 RDYIHVMDLAD---------GCIAYNLGNGKGISVLEMVAAFEKASGKKIPIK----FCPRRVGDATAVYAATDKAHKEL 304 (335)
Q Consensus 238 ~~~v~~~D~~~---------~~~~~nv~~~~~~s~~el~~~i~~~~g~~~~~~----~~~~~~~~~~~~~~d~~k~~~~L 304 (335)
|+|+|++|+++ ....+++..+...++.++++.+.+.++...... ....++.+......|++|+++.|
T Consensus 226 rd~~~v~D~a~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~d~~Kak~~L 305 (339)
T d1n7ha_ 226 RDWGFAGDYVEAMWLMLQQEKPDDYVVATEEGHTVEEFLDVSFGYLGLNWKDYVEIDQRYFRPAEVDNLQGDASKAKEVL 305 (339)
T ss_dssp EECEEHHHHHHHHHHHHTSSSCCEEEECCSCEEEHHHHHHHHHHHTTCCGGGTEEECGGGSCSSCCCBCCBCCHHHHHHH
T ss_pred ccceeeehHHHHHHHHHhcCCCCccccccccccccchhhhhhhhhhhcccCceeeeccCCCCCCCCCeeeECHHHHHHHH
Confidence 99999999998 355677888999999999999999998764321 12234556667788999999999
Q ss_pred CCccccCHHHHHHHHHHHHhcC
Q 019795 305 GWKPKYGIEDMCAHQWNWAKNN 326 (335)
Q Consensus 305 g~~p~~~~~~~~~~~~~~~~~~ 326 (335)
||+|+++++++|+++++|+.+.
T Consensus 306 Gw~P~~~le~gi~~ti~~~~~~ 327 (339)
T d1n7ha_ 306 GWKPQVGFEKLVKMMVDEDLEL 327 (339)
T ss_dssp CCCCCSCHHHHHHHHHHHHHHH
T ss_pred CCCcCCCHHHHHHHHHHHHHHH
Confidence 9999999999999999999763
|
| >d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-tyvelose-2-epimerase species: Salmonella typhi [TaxId: 90370]
Probab=100.00 E-value=2.4e-43 Score=316.43 Aligned_cols=305 Identities=25% Similarity=0.428 Sum_probs=240.0
Q ss_pred eEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCCCEE
Q 019795 6 NILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKFEAV 85 (335)
Q Consensus 6 ~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~d~v 85 (335)
+|||||||||||++|+++|+++|++|+++++...... .+.+..+.. .++++++.+|++|.+++.++++..++|+|
T Consensus 2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~--~~~~~~~~~---~~~~~~i~~Di~~~~~l~~~~~~~~~d~V 76 (338)
T d1orra_ 2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGA--TDNLHWLSS---LGNFEFVHGDIRNKNDVTRLITKYMPDSC 76 (338)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTH--HHHHHHHHT---TCCCEEEECCTTCHHHHHHHHHHHCCSEE
T ss_pred EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcccc--hhHHHHhhc---cCCcEEEEcccCCHHHHHHHHHhcCCceE
Confidence 7999999999999999999999999999986433322 122222111 16789999999999999999987789999
Q ss_pred EEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccc-cCCCCCCC----------------ccCCC
Q 019795 86 IHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATI-YGQPEKIP----------------CVEDF 148 (335)
Q Consensus 86 i~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~v-yg~~~~~~----------------~~e~~ 148 (335)
||+|+.........++...+++|+.||.+|+++|.+.+++++|++||+.. |+.....+ ..+..
T Consensus 77 ih~aa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~i~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (338)
T d1orra_ 77 FHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDEST 156 (338)
T ss_dssp EECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCBCTTS
T ss_pred EeecccccccccccChHHHHHHHHHHHHHHHHhhhcccccccccccccccccccccccccccccccccccccccCcccCC
Confidence 99999987777778889999999999999999999998877666666544 44332221 23344
Q ss_pred CCCCCChhHHhHHHHHHHHHHHHhhCCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHHHhCCCCceeEeccc
Q 019795 149 PYGAMNPYGRTKQWCEEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQD 228 (335)
Q Consensus 149 ~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 228 (335)
+..|.+.|+.+|...|.++..+.+.+ +.....+|++++|++..... ........++..+.....+....+.++|
T Consensus 157 ~~~~~~~y~~~k~~~e~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~g-- 230 (338)
T d1orra_ 157 QLDFHSPYGCSKGAADQYMLDYARIF-GLNTVVFRHSSMYGGRQFAT---YDQGWVGWFCQKAVEIKNGINKPFTISG-- 230 (338)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHHHHHH-CCEEEEEEECCEECTTCCCB---TTBCHHHHHHHHHHHHHTTCCCCEEEES--
T ss_pred ccccccccccccchhhhhhhhhhhcc-Ccccccccccceeecccccc---ccccccchhhHHHHHHHhccCCceEEeC--
Confidence 56678889999999999999888888 99999999999998754321 1111111122222233333333388899
Q ss_pred CCCCCCceeeeeeeHhhhhc------------cCceEEecC--CccccHHHHHHHHHHHhCCCCCceeCCCCCCccceee
Q 019795 229 YPTKDGSAVRDYIHVMDLAD------------GCIAYNLGN--GKGISVLEMVAAFEKASGKKIPIKFCPRRVGDATAVY 294 (335)
Q Consensus 229 ~~~~~~~~~~~~v~~~D~~~------------~~~~~nv~~--~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~ 294 (335)
+|.+.++|+|++|+++ .+++||+.. +..+++.|+++.+.+.++.+.++...+.++.+.....
T Consensus 231 ----~g~~~r~~~~v~D~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 306 (338)
T d1orra_ 231 ----NGKQVRDVLHAEDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLLEDYCNIDMRFTNLPVRESDQRVFV 306 (338)
T ss_dssp ----SSCCEEECEEHHHHHHHHHHHHHTHHHHTTCEEEESSCGGGEEEHHHHHHHHHHHHTCCCCEEEECCCSSCCSEEC
T ss_pred ----CCceeEeeecccchhhHHHHHHhccccccCccccccccccccccHHHHHHHHHHHHCCCceeEeCCCCCCCcCeee
Confidence 8999999999999987 478999854 5679999999999999999988888888788888888
Q ss_pred ccHHHHHHhcCCccccCHHHHHHHHHHHHhc
Q 019795 295 AATDKAHKELGWKPKYGIEDMCAHQWNWAKN 325 (335)
Q Consensus 295 ~d~~k~~~~Lg~~p~~~~~~~~~~~~~~~~~ 325 (335)
.|++|+++.|||+|+++++++|+++++|+++
T Consensus 307 ~d~~k~~~~Lg~~p~~sl~e~i~~ti~W~k~ 337 (338)
T d1orra_ 307 ADIKKITNAIDWSPKVSAKDGVQKMYDWTSS 337 (338)
T ss_dssp BCCHHHHHHHCCCCCSCHHHHHHHHHHHHHH
T ss_pred ECHHHHHHHHCCCcCCCHHHHHHHHHHHHHc
Confidence 9999999999999999999999999999985
|
| >d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sulfolipid biosynthesis protein SQD1 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=100.00 E-value=1.6e-42 Score=317.98 Aligned_cols=312 Identities=26% Similarity=0.342 Sum_probs=231.6
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecC----------------CCCchhhHHhhhhhcCCccccceeEEEccC
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNL----------------HNSVPEAVDRVKDLAGPELAKKLEFHVGDL 67 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~----------------~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl 67 (335)
+|+|||||||||||++|+++|+++||+|+++|.. .........+...... ++++++.+||
T Consensus 1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~i~~~~~Dl 76 (393)
T d1i24a_ 1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTG----KSIELYVGDI 76 (393)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHC----CCCEEEESCT
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEecCCcccccccccccccccccchHHHHHHHHhhcC----CCcEEEEccC
Confidence 5899999999999999999999999999999621 0111111122222222 6789999999
Q ss_pred CCHHHHHHHHhcCCCCEEEEcccccchhhhhcC---hHHHHHHhHHHHHHHHHHHHHcCCC-EEEEeccccccCCCCCCC
Q 019795 68 RNKDDLDKLFSSQKFEAVIHFGALKAVAESVQH---PFRYFDNNLIGTINLYQAMAKYNCK-KLVFSSSATIYGQPEKIP 143 (335)
Q Consensus 68 ~d~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~---~~~~~~~nv~~~~~l~~~~~~~~~~-~~v~~Ss~~vyg~~~~~~ 143 (335)
+|.+.+.++++..++|+|||+|+......+..+ +..++..|+.|+.+++++|++.+++ ++++.||..+|+......
T Consensus 77 ~d~~~l~~~~~~~~~d~ViHlAa~~~~~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~~i~~ss~~~~~~~~~~~ 156 (393)
T d1i24a_ 77 CDFEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMGEYGTPNIDI 156 (393)
T ss_dssp TSHHHHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGGCCCSSCB
T ss_pred CCHHHHHHHHHhhcchheeccccccccccccccccccccccccccccccHHHHHHHHhccccceeecccccccccccccc
Confidence 999999999997789999999998665554433 4567899999999999999998764 677888888887543211
Q ss_pred ------c-------cCCCCCCCCChhHHhHHHHHHHHHHHHhhCCCCeEEEEecccccCCCCCCCC-------CCCCCCC
Q 019795 144 ------C-------VEDFPYGAMNPYGRTKQWCEEIAFDVQKADPEWRIILLRYFNPVGAHESGKL-------GEDPKGI 203 (335)
Q Consensus 144 ------~-------~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~-------g~~~~~~ 203 (335)
. ++..+..|.+.|+.+|.++|.++..+.+++ +++++++||++|||+...... +......
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~-~l~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~ 235 (393)
T d1i24a_ 157 EEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW-GIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAV 235 (393)
T ss_dssp CSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHH-CCEEEEEEECEEECSCCTTGGGSGGGCCCCCCSTT
T ss_pred ccccccccccccccccccccccccHHHHHhhhhccccccccccc-ceeeeecccccccCCCccccccccccccccccccc
Confidence 1 122356788899999999999999998887 999999999999999643210 1111122
Q ss_pred CCChHH-HHHHHHhCCCCceeEecccCCCCCCceeeeeeeHhhhhc----------cCceEEe--cCCccccHHHHHHHH
Q 019795 204 PNNLMP-YIQQVAVGRHPELNVYGQDYPTKDGSAVRDYIHVMDLAD----------GCIAYNL--GNGKGISVLEMVAAF 270 (335)
Q Consensus 204 ~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~v~~~D~~~----------~~~~~nv--~~~~~~s~~el~~~i 270 (335)
...+++ ++.++..+. + +.++| ++.+.|||+|++|+++ ..+.+++ ++++.+|+.|+++.+
T Consensus 236 ~~~~i~~~~~~~~~~~-~-~~i~g------~~~~~rd~v~v~D~~~a~~~~~~~~~~~g~~~~~~~~~~~~si~el~~~i 307 (393)
T d1i24a_ 236 FGTALNRFCVQAAVGH-P-LTVYG------KGGQTRGYLDIRDTVQCVEIAIANPAKAGEFRVFNQFTEQFSVNELASLV 307 (393)
T ss_dssp TCCHHHHHHHHHHHTC-C-EEEET------TSCCEEEEEEHHHHHHHHHHHHHSCCCTTCEEEEEECSEEEEHHHHHHHH
T ss_pred cccchhhhhHHhhcCC-e-eEEee------ecccccccccccchHHHHHHHHHhhcccceeeeecCCCCeeEHHHHHHHH
Confidence 233444 455555554 4 88899 8999999999999987 2333333 356789999999999
Q ss_pred HHHh---CCCCCceeC--CCCCCccceeeccHHHHHHhcCCccccCHHHHHHHHHHHHhcCCCC
Q 019795 271 EKAS---GKKIPIKFC--PRRVGDATAVYAATDKAHKELGWKPKYGIEDMCAHQWNWAKNNPMG 329 (335)
Q Consensus 271 ~~~~---g~~~~~~~~--~~~~~~~~~~~~d~~k~~~~Lg~~p~~~~~~~~~~~~~~~~~~~~~ 329 (335)
.+.. +........ +..+.+...+..|++|++ .|||+|+++++++++++++|++++...
T Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~-~LGw~P~~~~~~~i~~~~~~~~~~k~~ 370 (393)
T d1i24a_ 308 TKAGSKLGLDVKKMTVPNPRVEAEEHYYNAKHTKLM-ELGLEPHYLSDSLLDSLLNFAVQFKDR 370 (393)
T ss_dssp HHHHHTTTCCCCEEEECCSSCSCSSCCCCBCCCHHH-HTTCCCCCCCHHHHHHHHHHHHHTGGG
T ss_pred HHHHHhhCCCcceeeccCCCCCCCccEecCCHHHHH-HcCCccccCHHHHHHHHHHHHHHHHHh
Confidence 8875 444444332 334455667788999996 599999999999999999999987653
|
| >d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-glucose-4,6-dehydratase species: Yersinia pseudotuberculosis [TaxId: 633]
Probab=100.00 E-value=4.3e-41 Score=304.16 Aligned_cols=301 Identities=22% Similarity=0.302 Sum_probs=240.4
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCC
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQK 81 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~ 81 (335)
.++|+|||||||||||++|+++|+++|++|++++|+..+.......... .+.++++.+|++|.+.+.+++....
T Consensus 6 ~~~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~------~~~i~~~~~Dl~d~~~l~~~~~~~~ 79 (356)
T d1rkxa_ 6 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARV------ADGMQSEIGDIRDQNKLLESIREFQ 79 (356)
T ss_dssp HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTT------TTTSEEEECCTTCHHHHHHHHHHHC
T ss_pred hCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHHhhhhc------ccCCeEEEeeccChHhhhhhhhhch
Confidence 3689999999999999999999999999999999987765544332211 2579999999999999999998888
Q ss_pred CCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCC-CEEEEeccccccCCC-CCCCccCCCCCCCCChhHHh
Q 019795 82 FEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNC-KKLVFSSSATIYGQP-EKIPCVEDFPYGAMNPYGRT 159 (335)
Q Consensus 82 ~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~-~~~v~~Ss~~vyg~~-~~~~~~e~~~~~~~~~Y~~s 159 (335)
+|+|+|+|+......+...+...+++|+.++.++++++++.+. ..+++.|+...|... ...+.+|+.+..|.++|+.+
T Consensus 80 ~~~v~~~aa~~~~~~~~~~~~~~~~~Nv~g~~n~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~p~~~y~~~ 159 (356)
T d1rkxa_ 80 PEIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEWIWGYRENEAMGGYDPYSNS 159 (356)
T ss_dssp CSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCCSSSCBCTTSCBCCSSHHHHH
T ss_pred hhhhhhhhccccccccccCCccccccccccchhhhhhhhccccccccccccccccccccccccccccccccCCCCccccc
Confidence 9999999999877777888999999999999999999998764 455566655555443 44567778888999999999
Q ss_pred HHHHHHHHHHHHhhC--------CCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHHHhCCCCceeEecccCCC
Q 019795 160 KQWCEEIAFDVQKAD--------PEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPT 231 (335)
Q Consensus 160 K~~~E~~~~~~~~~~--------~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 231 (335)
|...|..+..+..++ .++.++++||+++|||+.. ....+++.+.+...+..+ .+++
T Consensus 160 k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~vyGp~~~---------~~~~~i~~~~~~~~~~~~--~~~~----- 223 (356)
T d1rkxa_ 160 KGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDW---------ALDRIVPDILRAFEQSQP--VIIR----- 223 (356)
T ss_dssp HHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCC---------CSSCHHHHHHHHHHTTCC--EECS-----
T ss_pred cccchhhhhHHhhhcccchhccccCceEEeccCCCeeCCCcc---------hhhHHHHHHHHHHhCCCc--eEEe-----
Confidence 999999988766532 2678999999999998532 123477777777777665 4566
Q ss_pred CCCceeeeeeeHhhhhc---------------cCceEE--ecCCccccHHHHHHHHHHHhCCCCCceeCC-CCCCcccee
Q 019795 232 KDGSAVRDYIHVMDLAD---------------GCIAYN--LGNGKGISVLEMVAAFEKASGKKIPIKFCP-RRVGDATAV 293 (335)
Q Consensus 232 ~~~~~~~~~v~~~D~~~---------------~~~~~n--v~~~~~~s~~el~~~i~~~~g~~~~~~~~~-~~~~~~~~~ 293 (335)
.+.+.++|+|++|++. .+...+ ..++..+++.++++.+.+.++....+.... .++.+....
T Consensus 224 -~~~~~~~~~~v~D~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 302 (356)
T d1rkxa_ 224 -NPHAIRPWQHVLEPLSGYLLLAQKLYTDGAEYAEGWNFGPNDADATPVKNIVEQMVKYWGEGASWQLDGNAHPHEAHYL 302 (356)
T ss_dssp -CTTCEECCEETHHHHHHHHHHHHHHHHTCGGGCSEEECCCCGGGCEEHHHHHHHHHHHHCTTCCEEC-------CCCCC
T ss_pred -eccccccccccccccchhhhhhhhhcccccccccccccccccccccccchhhhhhHHHhCCCccEEEcCCCCCCCcCee
Confidence 7889999999999987 123333 334567999999999999999877665433 345566777
Q ss_pred eccHHHHHHhcCCccccCHHHHHHHHHHHHhc
Q 019795 294 YAATDKAHKELGWKPKYGIEDMCAHQWNWAKN 325 (335)
Q Consensus 294 ~~d~~k~~~~Lg~~p~~~~~~~~~~~~~~~~~ 325 (335)
.+|++|+++.|||+|+++++++|+++++|+++
T Consensus 303 ~~d~skak~~LGw~P~~~l~egi~~ti~wyk~ 334 (356)
T d1rkxa_ 303 KLDCSKAKMQLGWHPRWNLNTTLEYIVGWHKN 334 (356)
T ss_dssp CBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHH
T ss_pred eEcHHHHHHHHCCCcCCCHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999987
|
| >d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: DTDP-4-dehydrorhamnose reductase RfbD species: Clostridium acetobutylicum [TaxId: 1488]
Probab=100.00 E-value=2.2e-38 Score=276.89 Aligned_cols=265 Identities=18% Similarity=0.162 Sum_probs=224.5
Q ss_pred CeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCCCE
Q 019795 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKFEA 84 (335)
Q Consensus 5 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~d~ 84 (335)
|+|||||||||||++|+++|.++|++|++++|++ +|++|.+++.++++...+|+
T Consensus 2 MKIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~~--------------------------~D~~d~~~~~~~l~~~~~d~ 55 (281)
T d1vl0a_ 2 MKILITGANGQLGREIQKQLKGKNVEVIPTDVQD--------------------------LDITNVLAVNKFFNEKKPNV 55 (281)
T ss_dssp EEEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT--------------------------CCTTCHHHHHHHHHHHCCSE
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEeechh--------------------------ccCCCHHHHHHHHHHcCCCE
Confidence 5699999999999999999999999999998731 38899999999998778999
Q ss_pred EEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccCCCCCCCccCCCCCCCCChhHHhHHHHH
Q 019795 85 VIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQWCE 164 (335)
Q Consensus 85 vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~Y~~sK~~~E 164 (335)
|||+|+......+...++.....|+..+..+.+.+.... ..+++.||..+|+.....+..|+++..|.+.|+.+|...|
T Consensus 56 vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~-~~~~~~ss~~v~~~~~~~~~~e~~~~~~~~~~~~~k~~~e 134 (281)
T d1vl0a_ 56 VINCAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVG-AEIVQISTDYVFDGEAKEPITEFDEVNPQSAYGKTKLEGE 134 (281)
T ss_dssp EEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHT-CEEEEEEEGGGSCSCCSSCBCTTSCCCCCSHHHHHHHHHH
T ss_pred EEeeccccccccccccchhhccccccccccccccccccc-ccccccccceeeeccccccccccccccchhhhhhhhhHHH
Confidence 999999988777788888999999999999999888876 5888899999999888889999999999999999999999
Q ss_pred HHHHHHHhhCCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHHHhCCCCceeEecccCCCCCCceeeeeeeHh
Q 019795 165 EIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAVRDYIHVM 244 (335)
Q Consensus 165 ~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~v~~~ 244 (335)
+++++. +.+.+++||+++||++. .+.+.+...+..+.+ +.+.+ +..++|+|++
T Consensus 135 ~~~~~~-----~~~~~i~R~~~vyG~~~-------------~~~~~~~~~~~~~~~-~~~~~--------~~~~~~i~v~ 187 (281)
T d1vl0a_ 135 NFVKAL-----NPKYYIVRTAWLYGDGN-------------NFVKTMINLGKTHDE-LKVVH--------DQVGTPTSTV 187 (281)
T ss_dssp HHHHHH-----CSSEEEEEECSEESSSS-------------CHHHHHHHHHHHCSE-EEEES--------SCEECCEEHH
T ss_pred HHHHHh-----CCCccccceeEEeCCCc-------------ccccchhhhhccCCc-eeecC--------Cceeccchhh
Confidence 998764 77899999999999842 245555544444444 55554 4789999999
Q ss_pred hhhc---------cCceEEecCCccccHHHHHHHHHHHhCCCCCceeCCCCCC-----ccceeeccHHHHHHhcCCcccc
Q 019795 245 DLAD---------GCIAYNLGNGKGISVLEMVAAFEKASGKKIPIKFCPRRVG-----DATAVYAATDKAHKELGWKPKY 310 (335)
Q Consensus 245 D~~~---------~~~~~nv~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~-----~~~~~~~d~~k~~~~Lg~~p~~ 310 (335)
|+++ ..++||+++++.+|+.|+++.+.+.+|.+..+...+.... .+.+.++|++|+++.|||+|+
T Consensus 188 D~~~~~~~~~~~~~~g~~~~~~~~~~s~~e~~~~i~~~~g~~~~i~~i~~~~~~~~a~rp~~~~ld~~k~~~~~g~~~~- 266 (281)
T d1vl0a_ 188 DLARVVLKVIDEKNYGTFHCTCKGICSWYDFAVEIFRLTGIDVKVTPCTTEEFPRPAKRPKYSVLRNYMLELTTGDITR- 266 (281)
T ss_dssp HHHHHHHHHHHHTCCEEEECCCBSCEEHHHHHHHHHHHHCCCCEEEEECSTTSCCSSCCCSBCCBCCHHHHHTTCCCCC-
T ss_pred hhhhhhhhhhhhcccCceeEeCCCccchHHHHHHHHHHhCCCceEEeccHHHcCCcCCCccccccCHHHHHHHhCCCCC-
Confidence 9997 4679999999999999999999999998877765443221 123456899999999999999
Q ss_pred CHHHHHHHHHHHHh
Q 019795 311 GIEDMCAHQWNWAK 324 (335)
Q Consensus 311 ~~~~~~~~~~~~~~ 324 (335)
+|+++|++++++++
T Consensus 267 ~~~~~l~~~l~~l~ 280 (281)
T d1vl0a_ 267 EWKESLKEYIDLLQ 280 (281)
T ss_dssp BHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHhc
Confidence 99999999999986
|
| >d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Aldehyde reductase II species: Sporobolomyces salmonicolor [TaxId: 5005]
Probab=100.00 E-value=1.1e-37 Score=280.45 Aligned_cols=300 Identities=18% Similarity=0.176 Sum_probs=213.0
Q ss_pred CCCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcC
Q 019795 1 MASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQ 80 (335)
Q Consensus 1 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~ 80 (335)
|.++|+|||||||||||++|++.|+++|++|+++.|+..+...... +.... ........+.+|++|.+.+.+++.
T Consensus 8 ~~~gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~~-~~~~~--~~~~~~~~~~~Dl~~~~~~~~~~~-- 82 (342)
T d1y1pa1 8 LPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQK-RWDAK--YPGRFETAVVEDMLKQGAYDEVIK-- 82 (342)
T ss_dssp SCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-HHHHH--STTTEEEEECSCTTSTTTTTTTTT--
T ss_pred CCCcCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHHH-hhhcc--ccccccEEEeccccchhhhhhhcc--
Confidence 4578999999999999999999999999999999986543322221 11111 111344567799999999999887
Q ss_pred CCCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHc-CCCEEEEeccccccCCCC--C--CC------------
Q 019795 81 KFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKY-NCKKLVFSSSATIYGQPE--K--IP------------ 143 (335)
Q Consensus 81 ~~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~-~~~~~v~~Ss~~vyg~~~--~--~~------------ 143 (335)
++|+|+|+|+.... ...+...+..|+.|+.+++++|.+. +++++|++||+++++... . ..
T Consensus 83 ~~~~v~~~a~~~~~---~~~~~~~~~~nv~gt~~ll~~~~~~~~v~~~i~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~ 159 (342)
T d1y1pa1 83 GAAGVAHIASVVSF---SNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESID 159 (342)
T ss_dssp TCSEEEECCCCCSC---CSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHHH
T ss_pred cchhhhhhcccccc---cccccccccchhhhHHHHHHhhhcccccccccccccceeeccCCCCCCCcccccccccccccc
Confidence 89999999997542 3455678889999999999999887 689999999976543221 1 11
Q ss_pred ----ccCCCCCCCCChhHHhHHHHHHHHHHHHhhC-CCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHHHhCC
Q 019795 144 ----CVEDFPYGAMNPYGRTKQWCEEIAFDVQKAD-PEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGR 218 (335)
Q Consensus 144 ----~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 218 (335)
..|+.+..|.++|+.+|..+|++++.+.+++ .++.++++||+++|||...+. .....+..++.....+.
T Consensus 160 ~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~~i~p~~v~Gp~~~~~------~~~~~~~~~~~~l~~g~ 233 (342)
T d1y1pa1 160 KAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPE------TQSGSTSGWMMSLFNGE 233 (342)
T ss_dssp HHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTT------TCCCHHHHHHHHHHTTC
T ss_pred ccccccccCCCCCcCcccchhHhHHHHHHHhhhhcccccccceecccceeCCCCCcc------ccccchHHHHHHHHcCC
Confidence 2344455667789999999999999888764 367889999999999853211 11233445666666665
Q ss_pred CCceeEecccCCCCCCceeeeeeeHhhhhc----------cCceEEecCCccccHHHHHHHHHHHhCC-CCCceeCCCCC
Q 019795 219 HPELNVYGQDYPTKDGSAVRDYIHVMDLAD----------GCIAYNLGNGKGISVLEMVAAFEKASGK-KIPIKFCPRRV 287 (335)
Q Consensus 219 ~~~~~~~g~~~~~~~~~~~~~~v~~~D~~~----------~~~~~nv~~~~~~s~~el~~~i~~~~g~-~~~~~~~~~~~ 287 (335)
.. .. . .+.+.++|+|++|+|+ .++.||+++++.+|+.|+++.|.+.++. +.+... +...
T Consensus 234 ~~-~~-~-------~~~~~~~~v~v~Dva~~~i~~l~~~~~~g~~~~~~~~~~t~~eia~~i~k~~p~~~~~~~~-~~~~ 303 (342)
T d1y1pa1 234 VS-PA-L-------ALMPPQYYVSAVDIGLLHLGCLVLPQIERRRVYGTAGTFDWNTVLATFRKLYPSKTFPADF-PDQG 303 (342)
T ss_dssp CC-HH-H-------HTCCSEEEEEHHHHHHHHHHHHHCTTCCSCEEEECCEEECHHHHHHHHHHHCTTSCCCCCC-CCCC
T ss_pred cC-cc-c-------CCccceeeeeHHHHHHHHHHhhcCccccceEEEEcCCceEHHHHHHHHHHHcCCCcCCccC-CccC
Confidence 43 22 2 2456689999999986 4566778899999999999999998743 222221 1111
Q ss_pred Cccce-eeccHHHHHHhcCCccccCHHHHHHHHHHHHh
Q 019795 288 GDATA-VYAATDKAHKELGWKPKYGIEDMCAHQWNWAK 324 (335)
Q Consensus 288 ~~~~~-~~~d~~k~~~~Lg~~p~~~~~~~~~~~~~~~~ 324 (335)
..... ....+.+..+.|||.|.++++++|+++++..+
T Consensus 304 ~~~~~~~~~~s~~~~k~lg~~~~~~lee~i~d~I~s~~ 341 (342)
T d1y1pa1 304 QDLSKFDTAPSLEILKSLGRPGWRSIEESIKDLVGSET 341 (342)
T ss_dssp CCCCEECCHHHHHHHHHTTCCSCCCHHHHHHHHHCCSC
T ss_pred cccccccchHHHHHHHHcCCCCCcCHHHHHHHHHHhCc
Confidence 11111 11223444567999999999999999987543
|
| >d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: ADP-L-glycero-D-mannoheptose 6-epimerase species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=6.4e-36 Score=263.93 Aligned_cols=287 Identities=23% Similarity=0.283 Sum_probs=195.7
Q ss_pred EEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHH-HHHHHh---cCC
Q 019795 7 ILVTGGAGFIGTHCALQLLQGGF-KVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDD-LDKLFS---SQK 81 (335)
Q Consensus 7 vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~-~~~~~~---~~~ 81 (335)
|||||||||||++|+++|+++|+ +|+++++...... ...+. .....|..+..+ ...... ...
T Consensus 2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~~~--~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~ 68 (307)
T d1eq2a_ 2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK--FVNLV-----------DLNIADYMDKEDFLIQIMAGEEFGD 68 (307)
T ss_dssp EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGG--GHHHH-----------TSCCSEEEEHHHHHHHHHTTCCCSS
T ss_pred EEEecCccHHHHHHHHHHHhCCCCeEEEEECCCCcch--hhccc-----------ccchhhhccchHHHHHHhhhhcccc
Confidence 89999999999999999999995 6888875433211 11111 111222223222 222222 136
Q ss_pred CCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccCCCCCCCccCCCCCCCCChhHHhHH
Q 019795 82 FEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQ 161 (335)
Q Consensus 82 ~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~Y~~sK~ 161 (335)
+++|+|+|+..... ..........|+.++.+++++++..++ ++++.||+.+|+........++.+..|.+.|+.+|.
T Consensus 69 ~~~i~~~aa~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~i-~~v~~ss~~~~~~~~~~~~~~~~~~~~~~~Y~~~K~ 145 (307)
T d1eq2a_ 69 VEAIFHEGACSSTT--EWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSAATYGGRTSDFIESREYEKPLNVYGYSKF 145 (307)
T ss_dssp CCEEEECCSCCCTT--CCCHHHHHHHTHHHHHHHHHHHHHHTC-CEEEEEEGGGGTTCCSCBCSSGGGCCCSSHHHHHHH
T ss_pred hhhhhhhccccccc--ccccccccccccccccccccccccccc-cccccccccccccccccccccccccccccccccccc
Confidence 88999999875433 345567888899999999999999887 477777777777666666777778888999999999
Q ss_pred HHHHHHHHHHhhCCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHHHhCCCCceeEecccCCCCCCceeeeee
Q 019795 162 WCEEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAVRDYI 241 (335)
Q Consensus 162 ~~E~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~v 241 (335)
.+|.+++.+.+++ +++++++||+++|||.... ......+...+...+..+.......| ++...++|+
T Consensus 146 ~~e~~~~~~~~~~-~~~~~~~r~~~vyGp~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~g------~~~~~r~~~ 212 (307)
T d1eq2a_ 146 LFDEYVRQILPEA-NSQIVGFRYFNVYGPREGH------KGSMASVAFHLNTQLNNGESPKLFEG------SENFKRDFV 212 (307)
T ss_dssp HHHHHHHHHGGGC-SSCEEEEEECEEESSSCGG------GGGGSCHHHHHHHHHHC-------------------CBCEE
T ss_pred hhhhhcccccccc-ccccccccceeEeeccccc------cccccccccccccccccccceeeecC------ccceeeeee
Confidence 9999999999888 9999999999999995431 11123344544444444333244556 678889999
Q ss_pred eHhhhhc---------cCceEEecCCccccHHHHHHHHHHHhCCCCCceeCCC----CCCccceeeccHHHHHHhcCCcc
Q 019795 242 HVMDLAD---------GCIAYNLGNGKGISVLEMVAAFEKASGKKIPIKFCPR----RVGDATAVYAATDKAHKELGWKP 308 (335)
Q Consensus 242 ~~~D~~~---------~~~~~nv~~~~~~s~~el~~~i~~~~g~~~~~~~~~~----~~~~~~~~~~d~~k~~~~Lg~~p 308 (335)
|++|++. ..+.||+++++.+|+.|+++.+.+..+. ..+.+.+. ..........|++|+++.|||+|
T Consensus 213 ~v~d~~~~~~~~~~~~~~~~~~~~~~~~~si~~i~~~i~~~~~~-~~i~~~~~~~~~~~~~~~~~~~d~~k~~~~~~~~p 291 (307)
T d1eq2a_ 213 YVGDVADVNLWFLENGVSGIFNLGTGRAESFQAVADATLAYHKK-GQIEYIPFPDKLKGRYQAFTQADLTNLRAAGYDKP 291 (307)
T ss_dssp EHHHHHHHHHHHHHHCCCEEEEESCSCCBCHHHHHHHC----------------------CCCSCCBCCHHHHHTTCCCC
T ss_pred ecccHHHHHHHHhhhccccccccccccchhHHHHHHHHHHhcCC-CCeeEeeCCccCCCCCceeeecCHHHHHHHHCCCC
Confidence 9999997 5779999999999999999999887652 22222221 11223345569999999999999
Q ss_pred ccCHHHHHHHHHHHH
Q 019795 309 KYGIEDMCAHQWNWA 323 (335)
Q Consensus 309 ~~~~~~~~~~~~~~~ 323 (335)
+++++++|+++++|+
T Consensus 292 ~~sl~egi~~~i~w~ 306 (307)
T d1eq2a_ 292 FKTVAEGVTEYMAWL 306 (307)
T ss_dssp CCCHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHhC
Confidence 999999999999996
|
| >d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) species: Salmonella enterica serovar typhimurium [TaxId: 90371]
Probab=100.00 E-value=2.8e-35 Score=258.77 Aligned_cols=271 Identities=18% Similarity=0.143 Sum_probs=210.8
Q ss_pred CeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCCCE
Q 019795 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKFEA 84 (335)
Q Consensus 5 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~d~ 84 (335)
|+|||||||||||++|++.|.++|+ ++++++.... +.+|++|.+.+.++++..++|+
T Consensus 1 MKILItG~tGfiG~~l~~~L~~~g~-~v~~~~~~~~----------------------~~~Dl~~~~~~~~~i~~~~~D~ 57 (298)
T d1n2sa_ 1 MNILLFGKTGQVGWELQRSLAPVGN-LIALDVHSKE----------------------FCGDFSNPKGVAETVRKLRPDV 57 (298)
T ss_dssp CEEEEECTTSHHHHHHHHHTTTTSE-EEEECTTCSS----------------------SCCCTTCHHHHHHHHHHHCCSE
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCC-EEEEECCCcc----------------------ccCcCCCHHHHHHHHHHcCCCE
Confidence 5799999999999999999999886 4555543221 3469999999999998778999
Q ss_pred EEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccCCCCCCCccCCCCCCCCChhHHhHHHHH
Q 019795 85 VIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQWCE 164 (335)
Q Consensus 85 vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~Y~~sK~~~E 164 (335)
|||+||......+...+...+..|+.++.++++++++.+ .+++++||+.+|+.....+.+|+.+..|.+.|+.+|..+|
T Consensus 58 Vih~Aa~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~~ss~~~~~~~~~~~~~E~~~~~p~~~y~~~k~~~e 136 (298)
T d1n2sa_ 58 IVNAAAHTAVDKAESEPELAQLLNATSVEAIAKAANETG-AWVVHYSTDYVFPGTGDIPWQETDATSPLNVYGKTKLAGE 136 (298)
T ss_dssp EEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTTT-CEEEEEEEGGGSCCCTTCCBCTTSCCCCSSHHHHHHHHHH
T ss_pred EEEecccccccccccCccccccccccccccchhhhhccc-cccccccccccccCCCCCCCccccccCCCchHhhhhhhhh
Confidence 999999887777888999999999999999999998887 4799999999998888889999999999999999999999
Q ss_pred HHHHHHHhhCCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHHHhCCCCceeEecccCCCCCCceeeeeeeHh
Q 019795 165 EIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAVRDYIHVM 244 (335)
Q Consensus 165 ~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~v~~~ 244 (335)
++++.+. ....++|++..|+.. .......+.+.+..+.+ +.+. +...++++|+.
T Consensus 137 ~~~~~~~-----~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~-~~~~--------~~~~~~~~~~~ 190 (298)
T d1n2sa_ 137 KALQDNC-----PKHLIFRTSWVYAGK------------GNNFAKTMLRLAKERQT-LSVI--------NDQYGAPTGAE 190 (298)
T ss_dssp HHHHHHC-----SSEEEEEECSEECSS------------SCCHHHHHHHHHHHCSE-EEEE--------CSCEECCEEHH
T ss_pred hhHHhhh-----cccccccccceeecc------------CCccchhhhhhhcccce-eecc--------cceeecccccc
Confidence 9987653 334556665554431 11234455555555544 4443 34678899999
Q ss_pred hhhc--------------cCceEEecCCccccHHHHHHHHHHHhCC---CCCc---eeCCCC-----CCccceeeccHHH
Q 019795 245 DLAD--------------GCIAYNLGNGKGISVLEMVAAFEKASGK---KIPI---KFCPRR-----VGDATAVYAATDK 299 (335)
Q Consensus 245 D~~~--------------~~~~~nv~~~~~~s~~el~~~i~~~~g~---~~~~---~~~~~~-----~~~~~~~~~d~~k 299 (335)
|+++ ..++||+++++.+++.|+++.+.+..+. .... ...+.. ...+.+..+|++|
T Consensus 191 d~~~~~~~~i~~~~~~~~~~~~~n~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~a~RP~~~~ld~~K 270 (298)
T d1n2sa_ 191 LLADCTAHAIRVALNKPEVAGLYHLVAGGTTTWHDYAALVFDEARKAGITLALTELNAVPTSAYPTPASRPGNSRLNTEK 270 (298)
T ss_dssp HHHHHHHHHHHHHHHCGGGCEEEECCCBSCEEHHHHHHHHHHHHHHHTCCCCCCEEEEECSTTSCCSSCCCSBCCBCCHH
T ss_pred hHHHHHHHHHhhhhccccccccccccCCCceecHHHHHHHHhhhhccCccccccceeeeehhhcCccCCCccccccCHHH
Confidence 9876 4789999999999999999999887642 2111 111111 1112345789999
Q ss_pred HHHhcCCccccCHHHHHHHHHHHHhcC
Q 019795 300 AHKELGWKPKYGIEDMCAHQWNWAKNN 326 (335)
Q Consensus 300 ~~~~Lg~~p~~~~~~~~~~~~~~~~~~ 326 (335)
+++.|||+|+ +|+++|+++++++.+.
T Consensus 271 ~~~~~~~~~~-~~~~gl~~~i~~~~~~ 296 (298)
T d1n2sa_ 271 FQRNFDLILP-QWELGVKRMLTEMFTT 296 (298)
T ss_dssp HHHHHTCCCC-BHHHHHHHHHHHHHSC
T ss_pred HHHHHCCCCC-cHHHHHHHHHHHHHhh
Confidence 9999999999 9999999999999875
|
| >d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Pinoresinol-lariciresinol reductase species: Giant arborvitae (Thuja plicata) [TaxId: 3316]
Probab=99.95 E-value=9.6e-29 Score=217.97 Aligned_cols=235 Identities=13% Similarity=0.109 Sum_probs=170.2
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhh-HHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCC
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEA-VDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQK 81 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~ 81 (335)
++++|||||||||||++|+++|+++|++|++++|+....... ...+..... .+++++.+|++|.+.+.+++. +
T Consensus 2 ~k~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~----~~v~~v~~d~~d~~~~~~~~~--~ 75 (312)
T d1qyda_ 2 KKSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQ----LGAKLIEASLDDHQRLVDALK--Q 75 (312)
T ss_dssp CCCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHT----TTCEEECCCSSCHHHHHHHHT--T
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhHHHHHhhhcc----CCcEEEEeecccchhhhhhcc--C
Confidence 467799999999999999999999999999999976543222 222222221 678999999999999999998 7
Q ss_pred CCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccCCCCCCCccCCCCCCCCChhHHhHH
Q 019795 82 FEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQ 161 (335)
Q Consensus 82 ~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~Y~~sK~ 161 (335)
.++++++++.... ..|..++.++++++++.+..+++++||.++++. .+..+..+...|..+|.
T Consensus 76 ~~~~~~~~~~~~~-----------~~~~~~~~~~l~~a~~~~~~~~v~~Ss~g~~~~------~~~~~~~~~~~~~~~~~ 138 (312)
T d1qyda_ 76 VDVVISALAGGVL-----------SHHILEQLKLVEAIKEAGNIKRFLPSEFGMDPD------IMEHALQPGSITFIDKR 138 (312)
T ss_dssp CSEEEECCCCSSS-----------STTTTTHHHHHHHHHHSCCCSEEECSCCSSCTT------SCCCCCSSTTHHHHHHH
T ss_pred cchhhhhhhhccc-----------ccchhhhhHHHHHHHHhcCCcEEEEeeccccCC------CcccccchhhhhhHHHH
Confidence 8999998876432 235666778899999988778888888665432 22334555666777777
Q ss_pred HHHHHHHHHHhhCCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHHHhCCCCceeEecccCCCCCCceeeeee
Q 019795 162 WCEEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAVRDYI 241 (335)
Q Consensus 162 ~~E~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~v 241 (335)
.+++... .. +++++++||+.+||+....... ........... +.++| ++++.++|+
T Consensus 139 ~~~~~~~----~~-~~~~~i~r~~~~~g~~~~~~~~------------~~~~~~~~~~~-~~~~~------~g~~~~~~i 194 (312)
T d1qyda_ 139 KVRRAIE----AA-SIPYTYVSSNMFAGYFAGSLAQ------------LDGHMMPPRDK-VLIYG------DGNVKGIWV 194 (312)
T ss_dssp HHHHHHH----HT-TCCBCEEECCEEHHHHTTTSSC------------TTCCSSCCSSE-ECCBT------TSCSEEEEE
T ss_pred HHHHhhc----cc-ccceEEeccceeecCCccchhh------------HHHHhhhcccc-ccccc------cccccccee
Confidence 7666543 34 8899999999999974321100 00000111222 56677 789999999
Q ss_pred eHhhhhc-----------cCc-eEEecCCccccHHHHHHHHHHHhCCCCCceeCC
Q 019795 242 HVMDLAD-----------GCI-AYNLGNGKGISVLEMVAAFEKASGKKIPIKFCP 284 (335)
Q Consensus 242 ~~~D~~~-----------~~~-~~nv~~~~~~s~~el~~~i~~~~g~~~~~~~~~ 284 (335)
|++|+++ .++ +|++++++.+|++|+++.+.+.+|.+.+....+
T Consensus 195 ~v~Dva~a~~~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~~~i~ 249 (312)
T d1qyda_ 195 DEDDVGTYTIKSIDDPQTLNKTMYIRPPMNILSQKEVIQIWERLSEQNLDKIYIS 249 (312)
T ss_dssp CHHHHHHHHHHHTTCGGGSSSEEECCCGGGEEEHHHHHHHHHHHHTCCCEECCBC
T ss_pred eHHHHHHHHHHHhcCccccCceEEEeCCCcCCCHHHHHHHHHHHHCCCCeEEECC
Confidence 9999987 344 466767788999999999999999887665544
|
| >d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Phenylcoumaran benzylic ether reductase species: Loblolly pine (Pinus taeda) [TaxId: 3352]
Probab=99.94 E-value=1.9e-27 Score=208.49 Aligned_cols=229 Identities=16% Similarity=0.154 Sum_probs=164.7
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhh--HHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcC
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEA--VDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQ 80 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~--~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~ 80 (335)
++|+|||||||||||++|+++|+++|++|++++|+....... ...+..... ..+.++.+|+.+...+.+.+.
T Consensus 2 ~kkKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~----~~~~~~~~d~~~~~~~~~~~~-- 75 (307)
T d1qyca_ 2 SRSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKA----SGANIVHGSIDDHASLVEAVK-- 75 (307)
T ss_dssp CCCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHT----TTCEEECCCTTCHHHHHHHHH--
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhHHHHHHhhcc----CCcEEEEeecccchhhhhhhh--
Confidence 578999999999999999999999999999999976654322 122222222 578899999999999999998
Q ss_pred CCCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccCCCCCCCccCCCCCCCCChhHHhH
Q 019795 81 KFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTK 160 (335)
Q Consensus 81 ~~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~Y~~sK 160 (335)
+.+.|+|+++.. ++.++.+++++++..+++++++.|+...+.. +.....+...+...+
T Consensus 76 ~~~~vi~~~~~~---------------~~~~~~~~~~a~~~~~~~~~~~~s~~~~~~~-------~~~~~~~~~~~~~~~ 133 (307)
T d1qyca_ 76 NVDVVISTVGSL---------------QIESQVNIIKAIKEVGTVKRFFPSEFGNDVD-------NVHAVEPAKSVFEVK 133 (307)
T ss_dssp TCSEEEECCCGG---------------GSGGGHHHHHHHHHHCCCSEEECSCCSSCTT-------SCCCCTTHHHHHHHH
T ss_pred hceeeeeccccc---------------ccchhhHHHHHHHHhccccceeeeccccccc-------ccccccccccccccc
Confidence 789999987753 3344557888888888888888887544321 222233334466666
Q ss_pred HHHHHHHHHHHhhCCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHHHhCCCCceeEecccCCCCCCceeeee
Q 019795 161 QWCEEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAVRDY 240 (335)
Q Consensus 161 ~~~E~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 240 (335)
...+..+.+ . +++++++||+++||+...... ........+. . +.+++ ++++.++|
T Consensus 134 ~~~~~~~~~----~-~~~~~i~r~~~v~g~~~~~~~------------~~~~~~~~~~-~-~~~~~------~~~~~~~~ 188 (307)
T d1qyca_ 134 AKVRRAIEA----E-GIPYTYVSSNCFAGYFLRSLA------------QAGLTAPPRD-K-VVILG------DGNARVVF 188 (307)
T ss_dssp HHHHHHHHH----H-TCCBEEEECCEEHHHHTTTTT------------CTTCSSCCSS-E-EEEET------TSCCEEEE
T ss_pred ccccchhhc----c-CCCceecccceecCCCccchh------------hhhhhhhhcc-c-ceeee------cccccccC
Confidence 666666544 2 889999999999997432111 1111111222 2 56677 78899999
Q ss_pred eeHhhhhc-----------cCc-eEEecCCccccHHHHHHHHHHHhCCCCCceeCC
Q 019795 241 IHVMDLAD-----------GCI-AYNLGNGKGISVLEMVAAFEKASGKKIPIKFCP 284 (335)
Q Consensus 241 v~~~D~~~-----------~~~-~~nv~~~~~~s~~el~~~i~~~~g~~~~~~~~~ 284 (335)
+|++|+++ .++ +||+++++.+|+.|+++.+.+++|.+..+...+
T Consensus 189 i~v~Dva~~~~~~l~~~~~~~~~~~~~~~~~~~s~~ei~~~~~~~~G~~~~~~~~~ 244 (307)
T d1qyca_ 189 VKEEDIGTFTIKAVDDPRTLNKTLYLRLPANTLSLNELVALWEKKIDKTLEKAYVP 244 (307)
T ss_dssp ECHHHHHHHHHTTSSCGGGTTEEEECCCGGGEEEHHHHHHHHHHHTTSCCEEEEEC
T ss_pred CcHHHHHHHHHHHhcChhhcCceeEEeCCCCccCHHHHHHHHHHHHCCCCcEEECC
Confidence 99999987 233 566778899999999999999999887655443
|
| >d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: TAT-interacting protein TIP30 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.94 E-value=1.7e-26 Score=195.52 Aligned_cols=190 Identities=16% Similarity=0.149 Sum_probs=144.4
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCC--eEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGF--KVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~ 79 (335)
|++|+|||||||||||++|+++|+++|+ +|++++|++....... ...+....+|+.+.+++.++++
T Consensus 12 m~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~~-----------~~~i~~~~~D~~~~~~~~~~~~- 79 (232)
T d2bkaa1 12 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEA-----------YKNVNQEVVDFEKLDDYASAFQ- 79 (232)
T ss_dssp HTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGG-----------GGGCEEEECCGGGGGGGGGGGS-
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhcccc-----------cceeeeeeeccccccccccccc-
Confidence 4678999999999999999999999985 7999999765433211 1567888899999998988888
Q ss_pred CCCCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccCCCCCCCccCCCCCCCCChhHHh
Q 019795 80 QKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRT 159 (335)
Q Consensus 80 ~~~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~Y~~s 159 (335)
++|++||+++.... ......+.++|+.++.+++++|++.++++||++||..+++ .+.+.|+.+
T Consensus 80 -~~d~vi~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~a~~~~v~~fi~~Ss~~~~~-------------~~~~~Y~~~ 142 (232)
T d2bkaa1 80 -GHDVGFCCLGTTRG---KAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGADK-------------SSNFLYLQV 142 (232)
T ss_dssp -SCSEEEECCCCCHH---HHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCT-------------TCSSHHHHH
T ss_pred -cccccccccccccc---ccchhhhhhhcccccceeeecccccCccccccCCcccccc-------------CccchhHHH
Confidence 89999999987532 2334477889999999999999999999999999987653 233679999
Q ss_pred HHHHHHHHHHHHhhCCCC-eEEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHHHhCCCCceeEecccCCCCCCceee
Q 019795 160 KQWCEEIAFDVQKADPEW-RIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAVR 238 (335)
Q Consensus 160 K~~~E~~~~~~~~~~~~~-~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 238 (335)
|..+|+.++++ ++ .++++||+.+||+... ..+...+........+ ......
T Consensus 143 K~~~E~~l~~~-----~~~~~~IlRP~~i~G~~~~-----------~~~~~~~~~~~~~~~~------------~~~~~~ 194 (232)
T d2bkaa1 143 KGEVEAKVEEL-----KFDRYSVFRPGVLLCDRQE-----------SRPGEWLVRKFFGSLP------------DSWASG 194 (232)
T ss_dssp HHHHHHHHHTT-----CCSEEEEEECCEEECTTGG-----------GSHHHHHHHHHHCSCC------------TTGGGG
T ss_pred HHHhhhccccc-----cccceEEecCceeecCCCc-----------CcHHHHHHHHHhhccC------------CcccCC
Confidence 99999987653 55 4899999999998532 1123333332322221 233445
Q ss_pred eeeeHhhhhc
Q 019795 239 DYIHVMDLAD 248 (335)
Q Consensus 239 ~~v~~~D~~~ 248 (335)
..||++|+|+
T Consensus 195 ~~I~~~dvA~ 204 (232)
T d2bkaa1 195 HSVPVVTVVR 204 (232)
T ss_dssp TEEEHHHHHH
T ss_pred CeEEHHHHHH
Confidence 5789999987
|
| >d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Biliverdin IX beta reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.94 E-value=5.9e-26 Score=188.49 Aligned_cols=157 Identities=18% Similarity=0.175 Sum_probs=127.1
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCC
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQK 81 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~ 81 (335)
|.||+|+||||||+||++++++|+++|++|+++.|++.+.... .+.+++++.+|++|.+++.++++ +
T Consensus 1 m~~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~~-----------~~~~~~~~~gD~~d~~~l~~al~--~ 67 (205)
T d1hdoa_ 1 MAVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSE-----------GPRPAHVVVGDVLQAADVDKTVA--G 67 (205)
T ss_dssp CCCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSS-----------SCCCSEEEESCTTSHHHHHHHHT--T
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhcccc-----------cccccccccccccchhhHHHHhc--C
Confidence 5688999999999999999999999999999999976543221 12678999999999999999998 8
Q ss_pred CCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccCCCCCCCccCCCCCCCCChhHHhHH
Q 019795 82 FEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQ 161 (335)
Q Consensus 82 ~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~Y~~sK~ 161 (335)
+|+|||+++..... ...+++..++.++++++++.+++++|++||..+++.... .......|...|.
T Consensus 68 ~d~vi~~~g~~~~~-------~~~~~~~~~~~~l~~aa~~~~v~r~i~~ss~~~~~~~~~-------~~~~~~~~~~~~~ 133 (205)
T d1hdoa_ 68 QDAVIVLLGTRNDL-------SPTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTK-------VPPRLQAVTDDHI 133 (205)
T ss_dssp CSEEEECCCCTTCC-------SCCCHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCTTC-------SCGGGHHHHHHHH
T ss_pred CCEEEEEeccCCch-------hhhhhhHHHHHHHHHHHHhcCCCeEEEEeeeeccCCCcc-------ccccccccchHHH
Confidence 89999998864211 123457789999999999999999999999988765432 1222346888999
Q ss_pred HHHHHHHHHHhhCCCCeEEEEecccccCC
Q 019795 162 WCEEIAFDVQKADPEWRIILLRYFNPVGA 190 (335)
Q Consensus 162 ~~E~~~~~~~~~~~~~~~~~lR~~~v~G~ 190 (335)
.+|+++++ . +++++++||+.+++.
T Consensus 134 ~~e~~l~~----~-~~~~tiirp~~~~~~ 157 (205)
T d1hdoa_ 134 RMHKVLRE----S-GLKYVAVMPPHIGDQ 157 (205)
T ss_dssp HHHHHHHH----T-CSEEEEECCSEEECC
T ss_pred HHHHHHHh----c-CCceEEEecceecCC
Confidence 99988764 2 999999999998764
|
| >d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein At5g02240 (T7H20 290) species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.91 E-value=1.1e-24 Score=184.73 Aligned_cols=219 Identities=16% Similarity=0.150 Sum_probs=147.9
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCe--EEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcC
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFK--VVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQ 80 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~ 80 (335)
.|++|||||||||||++++++|+++|+. |+.+.|++.+. ..+ ..+++++.+|+++.+++.++++
T Consensus 2 ~~~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~----~~~--------~~~~~~~~~d~~~~~~~~~~~~-- 67 (252)
T d2q46a1 2 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGK----EKI--------GGEADVFIGDITDADSINPAFQ-- 67 (252)
T ss_dssp SCCEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHH----HHT--------TCCTTEEECCTTSHHHHHHHHT--
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHH----Hhc--------cCCcEEEEeeeccccccccccc--
Confidence 5889999999999999999999999966 55556643221 111 2578899999999999999998
Q ss_pred CCCEEEEcccccchhh-------------hhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccCCCCCCCccCC
Q 019795 81 KFEAVIHFGALKAVAE-------------SVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQPEKIPCVED 147 (335)
Q Consensus 81 ~~d~vi~~a~~~~~~~-------------~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~e~ 147 (335)
++|+|||+|+...... ..........+|+.++.+++..+.....+...+.|+...+.....
T Consensus 68 ~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~------ 141 (252)
T d2q46a1 68 GIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGSMGGTNPDHP------ 141 (252)
T ss_dssp TCSEEEECCCCCCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEEEETTTTCTTCG------
T ss_pred cceeeEEEEeeccccccccchhhhhhcccccccchhhhccccccceeeccccccccccccccccccccCCCCcc------
Confidence 8999999998643211 112344667889999999999999888888998888665422100
Q ss_pred CCCCCCChhHHhHHHHHHHHHHHHhhCCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHHHhCCCCceeEecc
Q 019795 148 FPYGAMNPYGRTKQWCEEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQ 227 (335)
Q Consensus 148 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 227 (335)
....+...|...+.+.+. +..+. +++++++||+++||+..... . + ..+... .
T Consensus 142 ~~~~~~~~~~~~~~~~~~----~~~~~-~~~~~ilRp~~v~g~~~~~~---------~-~-------~~~~~~--~---- 193 (252)
T d2q46a1 142 LNKLGNGNILVWKRKAEQ----YLADS-GTPYTIIRAGGLLDKEGGVR---------E-L-------LVGKDD--E---- 193 (252)
T ss_dssp GGGGGGCCHHHHHHHHHH----HHHHS-SSCEEEEEECEEECSCTTSS---------C-E-------EEESTT--G----
T ss_pred cccccccchhhhhhhhhh----hhhcc-cccceeecceEEECCCcchh---------h-h-------hhccCc--c----
Confidence 011112234444443333 33334 99999999999999853210 0 0 001111 0
Q ss_pred cCCCCCCceeeeeeeHhhhhc-----------cCceEEecCCc---cccHHHHHHHHHHHh
Q 019795 228 DYPTKDGSAVRDYIHVMDLAD-----------GCIAYNLGNGK---GISVLEMVAAFEKAS 274 (335)
Q Consensus 228 ~~~~~~~~~~~~~v~~~D~~~-----------~~~~~nv~~~~---~~s~~el~~~i~~~~ 274 (335)
......+|+|++|+|+ .+++|||+++. ..++.++.+.+.+..
T Consensus 194 -----~~~~~~~~i~~~Dva~a~~~~l~~~~~~g~~~~i~~~~~~~~~~~~~~~~lf~~i~ 249 (252)
T d2q46a1 194 -----LLQTDTKTVPRADVAEVCIQALLFEEAKNKAFDLGSKPEGTSTPTKDFKALFSQVT 249 (252)
T ss_dssp -----GGGSSCCEEEHHHHHHHHHHHTTCGGGTTEEEEEEECCTTTSCCCCCHHHHHTTCC
T ss_pred -----cccCCCCeEEHHHHHHHHHHHhCCccccCcEEEEeeCCCCCChhHHHHHHHHHHHH
Confidence 1233467999999998 47799998643 466777777665543
|
| >d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Negative transcriptional regulator NmrA species: Aspergillus nidulans [TaxId: 162425]
Probab=99.89 E-value=2e-22 Score=180.57 Aligned_cols=229 Identities=14% Similarity=0.057 Sum_probs=159.5
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCH-HHHHHHHhcCC
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNK-DDLDKLFSSQK 81 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~-~~~~~~~~~~~ 81 (335)
+.|+|+|||||||||++|+++|+++||+|+++.|+..+... ..+.. .++++++.+|++|. +.++.++. +
T Consensus 2 ~kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~--~~~~~------~~~v~~~~gD~~d~~~~~~~a~~--~ 71 (350)
T d1xgka_ 2 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIA--EELQA------IPNVTLFQGPLLNNVPLMDTLFE--G 71 (350)
T ss_dssp CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHH--HHHHT------STTEEEEESCCTTCHHHHHHHHT--T
T ss_pred CCCEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcchhhh--hhhcc------cCCCEEEEeeCCCcHHHHHHHhc--C
Confidence 57999999999999999999999999999999997665422 22211 15789999999885 45777887 7
Q ss_pred CCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccCCCCCCCccCCCCCCCCChhHHhHH
Q 019795 82 FEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQ 161 (335)
Q Consensus 82 ~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~Y~~sK~ 161 (335)
+|++++..... ...|+..+.+++++|++.+++++++.||...... .+..+..+|..+|.
T Consensus 72 ~~~~~~~~~~~------------~~~~~~~~~~~~~aa~~agv~~~v~~Ss~~~~~~---------~~~~~~~~~~~~k~ 130 (350)
T d1xgka_ 72 AHLAFINTTSQ------------AGDEIAIGKDLADAAKRAGTIQHYIYSSMPDHSL---------YGPWPAVPMWAPKF 130 (350)
T ss_dssp CSEEEECCCST------------TSCHHHHHHHHHHHHHHHSCCSEEEEEECCCGGG---------TSSCCCCTTTHHHH
T ss_pred CceEEeecccc------------cchhhhhhhHHHHHHHHhCCCceEEEeecccccc---------CCcccchhhhhhHH
Confidence 88888754331 1236677889999999999888888888654321 22334456788898
Q ss_pred HHHHHHHHHHhhCCCCeEEEEecccccCCCCCCCCCCCCCCCCCChHHHHHHHHhCCCCceeEecccCCCCCCceeeeee
Q 019795 162 WCEEIAFDVQKADPEWRIILLRYFNPVGAHESGKLGEDPKGIPNNLMPYIQQVAVGRHPELNVYGQDYPTKDGSAVRDYI 241 (335)
Q Consensus 162 ~~E~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~v 241 (335)
..|.++++ . +.+++++|++.+++......... .... ....+ ...+..++ +++....++
T Consensus 131 ~~~~~~~~----~-~~~~~~vr~~~~~~~~~~~~~~~----~~~~------~~~~~-~~~~~~~~------~~~~~~~~i 188 (350)
T d1xgka_ 131 TVENYVRQ----L-GLPSTFVYAGIYNNNFTSLPYPL----FQME------LMPDG-TFEWHAPF------DPDIPLPWL 188 (350)
T ss_dssp HHHHHHHT----S-SSCEEEEEECEEGGGCBSSSCSS----CBEE------ECTTS-CEEEEESS------CTTSCEEEE
T ss_pred HHHHHHHh----h-ccCceeeeeceeecccccccccc----cccc------ccccc-cceeeecc------cCCCcceEE
Confidence 88877653 2 78899999998877532111100 0000 00011 11133333 566778888
Q ss_pred eH-hhhhc-------------cCceEEecCCccccHHHHHHHHHHHhCCCCCceeCCC
Q 019795 242 HV-MDLAD-------------GCIAYNLGNGKGISVLEMVAAFEKASGKKIPIKFCPR 285 (335)
Q Consensus 242 ~~-~D~~~-------------~~~~~nv~~~~~~s~~el~~~i~~~~g~~~~~~~~~~ 285 (335)
++ +|+++ .++.|++++ +.+|+.|+++.+.+++|+++.+..+|.
T Consensus 189 ~~~~Dva~~v~~~l~~~~~~~~G~~~~~~g-~~~T~~eia~~l~~~~G~~v~~~~vp~ 245 (350)
T d1xgka_ 189 DAEHDVGPALLQIFKDGPQKWNGHRIALTF-ETLSPVQVCAAFSRALNRRVTYVQVPK 245 (350)
T ss_dssp CHHHHHHHHHHHHHHHCHHHHTTCEEEECS-EEECHHHHHHHHHHHHTSCEEEEECSS
T ss_pred EeHHHHHHHHHHHHhCChhhcCCeEEEEeC-CcCCHHHHHHHHHHHHCCcceEEECCH
Confidence 76 68866 377898875 679999999999999999876665553
|
| >d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: D(-)-3-hydroxybutyrate dehydrogenase species: Pseudomonas fragi [TaxId: 296]
Probab=99.89 E-value=1.4e-22 Score=173.82 Aligned_cols=175 Identities=14% Similarity=0.051 Sum_probs=138.6
Q ss_pred CCCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCC-chhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc
Q 019795 1 MASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNS-VPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS 79 (335)
Q Consensus 1 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~ 79 (335)
||++|++|||||+++||+++++.|+++|++|++++|++.. .+...+.+....+ .++.++.+|++|++++++++++
T Consensus 1 ~L~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~g----~~~~~~~~Dv~~~~~v~~~~~~ 76 (260)
T d1x1ta1 1 MLKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHG----VKVLYDGADLSKGEAVRGLVDN 76 (260)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHT----SCEEEECCCTTSHHHHHHHHHH
T ss_pred CCCcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHhcC----CcEEEEECCCCCHHHHHHHHHH
Confidence 8999999999999999999999999999999999987532 3333334433322 5788999999999999988875
Q ss_pred -----CCCCEEEEcccccc----hhhhhcChHHHHHHhHHHHHHHHHHH----HHcCCCEEEEeccccccCCCCCCCccC
Q 019795 80 -----QKFEAVIHFGALKA----VAESVQHPFRYFDNNLIGTINLYQAM----AKYNCKKLVFSSSATIYGQPEKIPCVE 146 (335)
Q Consensus 80 -----~~~d~vi~~a~~~~----~~~~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~v~~Ss~~vyg~~~~~~~~e 146 (335)
.++|++||+||... ...+.++++..+++|+.++.++++++ ++.+-.+||++||.....
T Consensus 77 ~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~--------- 147 (260)
T d1x1ta1 77 AVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLV--------- 147 (260)
T ss_dssp HHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS---------
T ss_pred HHHHhCCCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcCCceEeeccccccee---------
Confidence 48999999999742 23355678899999999999988875 344556999999976541
Q ss_pred CCCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 147 DFPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 147 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
+......|+.+|...+.+.+.++.+. .++++.++.|+.|-.+
T Consensus 148 --~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~ 191 (260)
T d1x1ta1 148 --ASANKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTP 191 (260)
T ss_dssp --CCTTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC-
T ss_pred --ccCCcchhhhhhhhHHHhHHHHHHHhchhCcEEEEEecCCCCCh
Confidence 23344579999999999999988774 2789999999987544
|
| >d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein TTHA0369 species: Thermus thermophilus [TaxId: 274]
Probab=99.89 E-value=2.5e-22 Score=170.74 Aligned_cols=167 Identities=18% Similarity=0.142 Sum_probs=132.6
Q ss_pred CCCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc-
Q 019795 1 MASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS- 79 (335)
Q Consensus 1 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~- 79 (335)
|+++|++|||||++.||+++++.|+++|++|++.+|++... +..+. .+..++.+|++|++++++++++
T Consensus 2 ~l~GK~alITGas~GIG~aia~~la~~G~~V~~~~~~~~~~-~~~~~----------~~~~~~~~Dv~~~~~v~~~~~~~ 70 (248)
T d2d1ya1 2 LFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGK-EVAEA----------IGGAFFQVDLEDERERVRFVEEA 70 (248)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHH-HHHHH----------HTCEEEECCTTCHHHHHHHHHHH
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHH-HHHHH----------cCCeEEEEeCCCHHHHHHHHHHH
Confidence 68999999999999999999999999999999999975432 22211 2346789999999998888775
Q ss_pred ----CCCCEEEEcccccc----hhhhhcChHHHHHHhHHHHHHHHHHHHH----cCCCEEEEeccccccCCCCCCCccCC
Q 019795 80 ----QKFEAVIHFGALKA----VAESVQHPFRYFDNNLIGTINLYQAMAK----YNCKKLVFSSSATIYGQPEKIPCVED 147 (335)
Q Consensus 80 ----~~~d~vi~~a~~~~----~~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~v~~Ss~~vyg~~~~~~~~e~ 147 (335)
.++|++||+||... ...+.++++..+++|+.++.++++++.. .+-.+||++||...+-
T Consensus 71 ~~~~G~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~~~~~---------- 140 (248)
T d2d1ya1 71 AYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLF---------- 140 (248)
T ss_dssp HHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTS----------
T ss_pred HHhcCCCCeEEEeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhcccccccccccccccccccccc----------
Confidence 48999999999742 2224567889999999999999998643 3456899999976541
Q ss_pred CCCCCCChhHHhHHHHHHHHHHHHhhCC--CCeEEEEecccccC
Q 019795 148 FPYGAMNPYGRTKQWCEEIAFDVQKADP--EWRIILLRYFNPVG 189 (335)
Q Consensus 148 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~~--~~~~~~lR~~~v~G 189 (335)
+......|+.+|...+.+++.++.++. ++++.++.|+.+-.
T Consensus 141 -~~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T 183 (248)
T d2d1ya1 141 -AEQENAAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIAT 183 (248)
T ss_dssp -BCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC
T ss_pred -cccccchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCC
Confidence 233446799999999999998887742 78999999987743
|
| >d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=99.88 E-value=6.8e-22 Score=168.44 Aligned_cols=173 Identities=15% Similarity=0.127 Sum_probs=139.5
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
+.+|++|||||+++||+++++.|+++|++|++++|+.....+..+.+.+.. .++..+.+|++|++++.++++.
T Consensus 8 lenKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~g-----~~~~~~~~Dvt~~~~v~~~~~~~~ 82 (251)
T d2c07a1 8 GENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFG-----YESSGYAGDVSKKEEISEVINKIL 82 (251)
T ss_dssp CSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTT-----CCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcC-----CcEEEEEccCCCHHHHHHHHHHHH
Confidence 578999999999999999999999999999999997766666666654432 5688999999999999988875
Q ss_pred ---CCCCEEEEcccccc----hhhhhcChHHHHHHhHHHHHHHHHHHH----HcCCCEEEEeccccccCCCCCCCccCCC
Q 019795 80 ---QKFEAVIHFGALKA----VAESVQHPFRYFDNNLIGTINLYQAMA----KYNCKKLVFSSSATIYGQPEKIPCVEDF 148 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~----~~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~v~~Ss~~vyg~~~~~~~~e~~ 148 (335)
.++|++||+|+... ...+.++++..+++|+.++..+++++. +.+-.+||++||....-
T Consensus 83 ~~~g~iDilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~----------- 151 (251)
T d2c07a1 83 TEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLT----------- 151 (251)
T ss_dssp HHCSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHH-----------
T ss_pred HhcCCceeeeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccCCCeEEEEECCHHhcC-----------
Confidence 48999999999743 223456788999999999999998753 44557999999966531
Q ss_pred CCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 149 PYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 149 ~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
+......|+.||...+.+++.++.++ .++++.++.|+.+-.+
T Consensus 152 ~~~~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~V~PG~v~T~ 195 (251)
T d2c07a1 152 GNVGQANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSD 195 (251)
T ss_dssp CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCEecc
Confidence 22334579999999999999988774 2789999999988554
|
| >d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative oxidoreductase Rv2002 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.88 E-value=6.1e-22 Score=167.71 Aligned_cols=170 Identities=16% Similarity=0.091 Sum_probs=135.7
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
+++|++|||||++.||+++++.|+++|++|++++|++.......+++. ....++.+|++|++++++++++
T Consensus 4 L~gK~alITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~--------~~~~~~~~Dv~~~~~v~~~~~~~~ 75 (244)
T d1nffa_ 4 LTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELA--------DAARYVHLDVTQPAQWKAAVDTAV 75 (244)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTG--------GGEEEEECCTTCHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhh--------CcceEEEeecCCHHHHHHHHHHHH
Confidence 578999999999999999999999999999999997654444333332 5678899999999999888775
Q ss_pred ---CCCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHHH----HcCCCEEEEeccccccCCCCCCCccCCC
Q 019795 80 ---QKFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAMA----KYNCKKLVFSSSATIYGQPEKIPCVEDF 148 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~v~~Ss~~vyg~~~~~~~~e~~ 148 (335)
.++|++||+||.... ..+.+++++.+++|+.++.++++++. +.+-.+||++||...+.
T Consensus 76 ~~~g~idilinnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~----------- 144 (244)
T d1nffa_ 76 TAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLA----------- 144 (244)
T ss_dssp HHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS-----------
T ss_pred HHhCCCeEEEECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcCcceEEecccccccc-----------
Confidence 489999999997432 23456788999999999999998753 34456899999976541
Q ss_pred CCCCCChhHHhHHHHHHHHHHHHhhCC--CCeEEEEecccccCC
Q 019795 149 PYGAMNPYGRTKQWCEEIAFDVQKADP--EWRIILLRYFNPVGA 190 (335)
Q Consensus 149 ~~~~~~~Y~~sK~~~E~~~~~~~~~~~--~~~~~~lR~~~v~G~ 190 (335)
+......|+.+|...+.+++.++.++. ++++.++.|+.+-.+
T Consensus 145 ~~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~ 188 (244)
T d1nffa_ 145 GTVACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTP 188 (244)
T ss_dssp CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSG
T ss_pred ccccccchhhHHHHHHHHHHHHHHHhcccCEEEEEEeeCCccCh
Confidence 223345799999999999999887742 789999999887544
|
| >d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Escherichia coli [TaxId: 562]
Probab=99.88 E-value=4.2e-22 Score=168.84 Aligned_cols=169 Identities=14% Similarity=0.071 Sum_probs=135.5
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
+++|+++||||++.||+++++.|+++|++|++++|++....+..+.+. .+...+.+|++|+++++++++.
T Consensus 2 l~gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~~~~~~--------~~~~~~~~Dv~~~~~v~~~~~~~~ 73 (243)
T d1q7ba_ 2 FEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLG--------ANGKGLMLNVTDPASIESVLEKIR 73 (243)
T ss_dssp CTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHG--------GGEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhC--------CCCcEEEEEecCHHHhhhhhhhhh
Confidence 579999999999999999999999999999999997655444443332 5678899999999999888875
Q ss_pred ---CCCCEEEEcccccc----hhhhhcChHHHHHHhHHHHHHHHHHHH----HcCCCEEEEeccccccCCCCCCCccCCC
Q 019795 80 ---QKFEAVIHFGALKA----VAESVQHPFRYFDNNLIGTINLYQAMA----KYNCKKLVFSSSATIYGQPEKIPCVEDF 148 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~----~~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~v~~Ss~~vyg~~~~~~~~e~~ 148 (335)
.++|++||+|+... ...+.++++..+++|+.++..+++++. +.+-.+||++||....-
T Consensus 74 ~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~----------- 142 (243)
T d1q7ba_ 74 AEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTM----------- 142 (243)
T ss_dssp HHTCSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHH-----------
T ss_pred cccCCcceehhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcCCCEeeeecchhhcC-----------
Confidence 48999999998743 233456788999999999999999864 44557999999966541
Q ss_pred CCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccC
Q 019795 149 PYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVG 189 (335)
Q Consensus 149 ~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G 189 (335)
+......|+.||...+.+++.++.++ .++++.++.|+.+-.
T Consensus 143 ~~~~~~~Y~asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T 185 (243)
T d1q7ba_ 143 GNGGQANYAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIET 185 (243)
T ss_dssp CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHhCccCeEEEEEecceEec
Confidence 22344689999999999999988774 278999999987743
|
| >d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Gluconate 5-dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=99.87 E-value=1.3e-21 Score=166.60 Aligned_cols=175 Identities=17% Similarity=0.174 Sum_probs=139.8
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
+++|++|||||+++||+++++.|+++|++|++++|+.....+..+++.+..+ .++.++.+|++|++++++++++
T Consensus 3 l~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~g----~~~~~~~~Dv~~~~~v~~~~~~~~ 78 (251)
T d1vl8a_ 3 LRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYG----VETMAFRCDVSNYEEVKKLLEAVK 78 (251)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHC----CCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhC----CcEEEEEccCCCHHHHHHHHHHHH
Confidence 6799999999999999999999999999999999987666666655544333 5788899999999999988875
Q ss_pred ---CCCCEEEEcccccc----hhhhhcChHHHHHHhHHHHHHHHHHHHH----cCCCEEEEeccccccCCCCCCCccCCC
Q 019795 80 ---QKFEAVIHFGALKA----VAESVQHPFRYFDNNLIGTINLYQAMAK----YNCKKLVFSSSATIYGQPEKIPCVEDF 148 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~----~~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~v~~Ss~~vyg~~~~~~~~e~~ 148 (335)
.++|++||+||... ...+.++++..+++|+.++..+++++.. .+-.++|++||....- .
T Consensus 79 ~~~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S~~~~~----------~ 148 (251)
T d1vl8a_ 79 EKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEE----------V 148 (251)
T ss_dssp HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTC----------C
T ss_pred HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccccccccccccchhcc----------c
Confidence 48999999999742 2335677889999999999999998654 3446999998854320 1
Q ss_pred CCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 149 PYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 149 ~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
+......|+.+|...+.+++.++.++ .++++.++.|+.+-.+
T Consensus 149 ~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~T~ 192 (251)
T d1vl8a_ 149 TMPNISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTK 192 (251)
T ss_dssp CSSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCST
T ss_pred cCccccchHHHHHhHHHHHHHHHHHhcccCeEEEEEeeCcccCH
Confidence 22234579999999999999888774 2799999999888554
|
| >d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase species: Streptomyces hydrogenans [TaxId: 1905]
Probab=99.87 E-value=9.3e-22 Score=167.54 Aligned_cols=169 Identities=18% Similarity=0.184 Sum_probs=135.7
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
+++|++|||||++.||+++++.|+++|++|++.+|+........+++ +.++.++.+|++|+++++++++.
T Consensus 3 L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~--------~~~~~~~~~Dv~~~~~v~~~~~~~~ 74 (254)
T d1hdca_ 3 LSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL--------GDAARYQHLDVTIEEDWQRVVAYAR 74 (254)
T ss_dssp CCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT--------GGGEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh--------CCceEEEEcccCCHHHHHHHHHHHH
Confidence 57999999999999999999999999999999999755443333322 25788999999999999988875
Q ss_pred ---CCCCEEEEcccccc----hhhhhcChHHHHHHhHHHHHHHHHHHH----HcCCCEEEEeccccccCCCCCCCccCCC
Q 019795 80 ---QKFEAVIHFGALKA----VAESVQHPFRYFDNNLIGTINLYQAMA----KYNCKKLVFSSSATIYGQPEKIPCVEDF 148 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~----~~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~v~~Ss~~vyg~~~~~~~~e~~ 148 (335)
.++|++||+|+... ...+.++++..+++|+.++..+++++. +.+-.+||++||...+.
T Consensus 75 ~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~~G~II~isS~~~~~----------- 143 (254)
T d1hdca_ 75 EEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLM----------- 143 (254)
T ss_dssp HHHSCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS-----------
T ss_pred HHcCCccEEEecCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcCCCeecccccchhcc-----------
Confidence 48999999999743 233556777899999999999999864 34557999999976541
Q ss_pred CCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccC
Q 019795 149 PYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVG 189 (335)
Q Consensus 149 ~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G 189 (335)
+......|+.+|...+.+.+.++.++ .++++.++.|+.|..
T Consensus 144 ~~~~~~~Y~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~v~T 186 (254)
T d1hdca_ 144 GLALTSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYT 186 (254)
T ss_dssp CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC
T ss_pred cccchhhHHHHHHHHHHHHHHHHHHhCCCceEEEEeeeCcccC
Confidence 23345689999999999999988774 278999999987743
|
| >d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 7-alpha-hydroxysteroid dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=99.87 E-value=1.1e-21 Score=167.49 Aligned_cols=173 Identities=16% Similarity=0.143 Sum_probs=139.4
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
+++|++|||||++.||++++++|+++|++|++++|+.....+..+++.+.. .++.++.+|++|+++++++++.
T Consensus 9 L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~~g-----~~~~~~~~Dvs~~~~~~~~~~~~~ 83 (255)
T d1fmca_ 9 LDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLG-----GQAFACRCDITSEQELSALADFAI 83 (255)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTT-----CCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcC-----CcEEEEEccCCCHHHHHHHHHHHH
Confidence 467999999999999999999999999999999998766666666665432 5788999999999999888775
Q ss_pred ---CCCCEEEEcccccc---hhhhhcChHHHHHHhHHHHHHHHHHHH----HcCCCEEEEeccccccCCCCCCCccCCCC
Q 019795 80 ---QKFEAVIHFGALKA---VAESVQHPFRYFDNNLIGTINLYQAMA----KYNCKKLVFSSSATIYGQPEKIPCVEDFP 149 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~---~~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~ 149 (335)
.++|++||+||... ...+.++++..+++|+.++.++++++. +.+-.++|++||..... +
T Consensus 84 ~~~g~iDilvnnAG~~~~~~~e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Ii~isS~~~~~-----------~ 152 (255)
T d1fmca_ 84 SKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAEN-----------K 152 (255)
T ss_dssp HHHSSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTC-----------C
T ss_pred HHcCCCCEeeeCCcCCCCCcccCCHHHHHHHHHHHHHHhhhhHHHHHhhhccccccccccccccchhc-----------c
Confidence 48999999999743 233566788999999999999998754 34456899999966541 2
Q ss_pred CCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 150 YGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 150 ~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
......|+.+|...+.+++.++.+. .++++.++.|+.|-.+
T Consensus 153 ~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~ 195 (255)
T d1fmca_ 153 NINMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTD 195 (255)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSH
T ss_pred ccccccchhHHHHHHHHHHHHHHHhCccCeEEEEeeeCcCcCh
Confidence 3344689999999999999988773 2799999999887543
|
| >d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus [TaxId: 274]
Probab=99.87 E-value=5.2e-21 Score=161.94 Aligned_cols=167 Identities=16% Similarity=0.139 Sum_probs=131.4
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
+++|++|||||+++||+++++.|+++|++|++++|+.....+..+. -+...+.+|++|++++++++++
T Consensus 3 L~gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~~~----------~~~~~~~~Dv~~~~~v~~~~~~~~ 72 (242)
T d1ulsa_ 3 LKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEA----------VGAHPVVMDVADPASVERGFAEAL 72 (242)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHT----------TTCEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH----------cCCeEEEEecCCHHHHHHHHHHHH
Confidence 5789999999999999999999999999999999975443333221 2467899999999999988775
Q ss_pred ---CCCCEEEEcccccc----hhhhhcChHHHHHHhHHHHHHHHHHHHHc----CCCEEEEeccccccCCCCCCCccCCC
Q 019795 80 ---QKFEAVIHFGALKA----VAESVQHPFRYFDNNLIGTINLYQAMAKY----NCKKLVFSSSATIYGQPEKIPCVEDF 148 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~----~~~~~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~~v~~Ss~~vyg~~~~~~~~e~~ 148 (335)
.++|++||+||... ...+.++++..+++|+.++.++.+++.+. +...++++||....
T Consensus 73 ~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~~~i~~~ss~~~~------------ 140 (242)
T d1ulsa_ 73 AHLGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRVYL------------ 140 (242)
T ss_dssp HHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGGGG------------
T ss_pred HhcCCceEEEECCcccccCchhhCcchhhhccccccchhhhhhhhhccccccccccceeeeecccccc------------
Confidence 48999999999743 23355678899999999999999986543 34467777775543
Q ss_pred CCCCCChhHHhHHHHHHHHHHHHhhCC--CCeEEEEecccccCC
Q 019795 149 PYGAMNPYGRTKQWCEEIAFDVQKADP--EWRIILLRYFNPVGA 190 (335)
Q Consensus 149 ~~~~~~~Y~~sK~~~E~~~~~~~~~~~--~~~~~~lR~~~v~G~ 190 (335)
+......|+.+|...+.+.+.++.++. ++++.++.|+.+-.+
T Consensus 141 ~~~~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~ 184 (242)
T d1ulsa_ 141 GNLGQANYAASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETR 184 (242)
T ss_dssp CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCT
T ss_pred CCCCCcchHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCcccCh
Confidence 223446899999999999998887742 789999999988554
|
| >d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Levodione reductase species: Corynebacterium aquaticum [TaxId: 144185]
Probab=99.87 E-value=2e-21 Score=166.05 Aligned_cols=175 Identities=14% Similarity=0.147 Sum_probs=139.4
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
+++|++|||||+++||+++++.|+++|++|++++|+.....+....+..... +.++..+.+|++|++++++++++
T Consensus 2 l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~---~~~~~~~~~Dvt~~~~v~~~~~~~~ 78 (258)
T d1iy8a_ 2 FTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAP---DAEVLTTVADVSDEAQVEAYVTATT 78 (258)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCT---TCCEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCC---CCeEEEEeccCCCHHHHHHHHHHHH
Confidence 5799999999999999999999999999999999987666555555544322 24788899999999999988875
Q ss_pred ---CCCCEEEEcccccc----h-hhhhcChHHHHHHhHHHHHHHHHHHH----HcCCCEEEEeccccccCCCCCCCccCC
Q 019795 80 ---QKFEAVIHFGALKA----V-AESVQHPFRYFDNNLIGTINLYQAMA----KYNCKKLVFSSSATIYGQPEKIPCVED 147 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~----~-~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~v~~Ss~~vyg~~~~~~~~e~ 147 (335)
+++|++||+||... . ..+.++++..+++|+.++.++++++. +.+-.+||++||....-
T Consensus 79 ~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~---------- 148 (258)
T d1iy8a_ 79 ERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIR---------- 148 (258)
T ss_dssp HHHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTS----------
T ss_pred HHhCCCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhcCCCCcccccHhhcc----------
Confidence 48999999999632 1 22557788999999999999999753 34557999999976531
Q ss_pred CCCCCCChhHHhHHHHHHHHHHHHhhCC--CCeEEEEecccccCC
Q 019795 148 FPYGAMNPYGRTKQWCEEIAFDVQKADP--EWRIILLRYFNPVGA 190 (335)
Q Consensus 148 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~~--~~~~~~lR~~~v~G~ 190 (335)
+......|+.+|...+.+++.++.+.. ++++.++.|+.+..+
T Consensus 149 -~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~i~PG~v~T~ 192 (258)
T d1iy8a_ 149 -GIGNQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTP 192 (258)
T ss_dssp -BCSSBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSH
T ss_pred -CCCCchHHHHHHHHHHHHHHHHHHHhCccCceEEEEeeCcccCH
Confidence 223346799999999999998887742 799999999887543
|
| >d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (s)-1-phenylethanol dehydrogenase species: Azoarcus sp. ebn1 [TaxId: 76114]
Probab=99.87 E-value=4e-21 Score=163.25 Aligned_cols=171 Identities=15% Similarity=0.128 Sum_probs=134.3
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
+++|++|||||+++||+++++.|+++|++|++.+|++.. .....+.+. +.++.++.+|++|++++++++++
T Consensus 3 L~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~--~~~~~~~~~-----g~~~~~~~~Dvs~~~~v~~~~~~~~ 75 (247)
T d2ew8a1 3 LKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAP--EAEAAIRNL-----GRRVLTVKCDVSQPGDVEAFGKQVI 75 (247)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCH--HHHHHHHHT-----TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchH--HHHHHHHHc-----CCcEEEEEeeCCCHHHHHHHHHHHH
Confidence 578999999999999999999999999999999986542 222333322 25788999999999999988765
Q ss_pred ---CCCCEEEEcccccc----hhhhhcChHHHHHHhHHHHHHHHHHHH----HcCCCEEEEeccccccCCCCCCCccCCC
Q 019795 80 ---QKFEAVIHFGALKA----VAESVQHPFRYFDNNLIGTINLYQAMA----KYNCKKLVFSSSATIYGQPEKIPCVEDF 148 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~----~~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~v~~Ss~~vyg~~~~~~~~e~~ 148 (335)
.++|++||+||... ...+.++++..+++|+.++..+++++. +.+-.++|++||.....
T Consensus 76 ~~~G~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~----------- 144 (247)
T d2ew8a1 76 STFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWL----------- 144 (247)
T ss_dssp HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGS-----------
T ss_pred HHcCCCCEEEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcCCCCccccccchhcc-----------
Confidence 48999999999743 233557888999999999999999754 44557999999976531
Q ss_pred CCCCCChhHHhHHHHHHHHHHHHhhCC--CCeEEEEecccccCC
Q 019795 149 PYGAMNPYGRTKQWCEEIAFDVQKADP--EWRIILLRYFNPVGA 190 (335)
Q Consensus 149 ~~~~~~~Y~~sK~~~E~~~~~~~~~~~--~~~~~~lR~~~v~G~ 190 (335)
+......|+.||...+.+++.++.+.. ++++.++.|+.+-.+
T Consensus 145 ~~~~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~ 188 (247)
T d2ew8a1 145 KIEAYTHYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTA 188 (247)
T ss_dssp CCSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC---
T ss_pred cCcccccchhhhccHHHHHHHHHHHhcccCeEEEEEeeCCCCCc
Confidence 233445799999999999998887642 789999999887544
|
| >d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.87 E-value=2e-21 Score=163.86 Aligned_cols=162 Identities=19% Similarity=0.178 Sum_probs=130.0
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
+++|++|||||+++||+++++.|+++|++|++++|+.... .++..+.+|++|++++++++++
T Consensus 5 l~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~----------------~~~~~~~~Dv~~~~~v~~~~~~~~ 68 (237)
T d1uzma1 5 FVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAP----------------KGLFGVEVDVTDSDAVDRAFTAVE 68 (237)
T ss_dssp CCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCC----------------TTSEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcchh----------------cCceEEEEecCCHHHHHHHHHHHH
Confidence 5899999999999999999999999999999999976543 4567899999999999888775
Q ss_pred ---CCCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHH----HHcCCCEEEEeccccccCCCCCCCccCCC
Q 019795 80 ---QKFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAM----AKYNCKKLVFSSSATIYGQPEKIPCVEDF 148 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~ 148 (335)
.++|++||+||.... ..+.++++.++++|+.++..+++++ ++.+.++||++||.....
T Consensus 69 ~~~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Iv~isS~~~~~----------- 137 (237)
T d1uzma1 69 EHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLW----------- 137 (237)
T ss_dssp HHHSSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC-------------
T ss_pred HhcCCceEEEeeecccccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccCCCceEEEcchhhcc-----------
Confidence 489999999997432 2245678899999999999988864 444556999999966431
Q ss_pred CCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 149 PYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 149 ~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
+......|+.+|...+.+++.++.++ .++++.++.|+.+..+
T Consensus 138 ~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~ 181 (237)
T d1uzma1 138 GIGNQANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTD 181 (237)
T ss_dssp ---CCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCH
T ss_pred CCcccHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeeeCcCCCh
Confidence 22334579999999999999888764 2789999999887543
|
| >d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.87 E-value=2.4e-21 Score=165.72 Aligned_cols=173 Identities=17% Similarity=0.093 Sum_probs=131.9
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
+++|++|||||++.||+++++.|+++|++|++++|++....+..+++.... .++..+.+|++++++++++++.
T Consensus 6 LkgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~-----~~~~~~~~Dv~~~~~v~~~~~~~~ 80 (259)
T d1xq1a_ 6 LKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKG-----FQVTGSVCDASLRPEREKLMQTVS 80 (259)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-----CCEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC-----CceEEEeccCCCHHHHHHHHHHHH
Confidence 579999999999999999999999999999999998766666665554422 4688999999999988877764
Q ss_pred ----CCCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHHH----HcCCCEEEEeccccccCCCCCCCccCC
Q 019795 80 ----QKFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAMA----KYNCKKLVFSSSATIYGQPEKIPCVED 147 (335)
Q Consensus 80 ----~~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~v~~Ss~~vyg~~~~~~~~e~ 147 (335)
..+|++||+||.... ..+.++++..+++|+.++..+++++. +.+-.+||++||....-
T Consensus 81 ~~~~g~idilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~---------- 150 (259)
T d1xq1a_ 81 SMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVV---------- 150 (259)
T ss_dssp HHHTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC----------------
T ss_pred HHhCCCcccccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhcccccccccccccccccccc----------
Confidence 369999999997432 22456788999999999999999754 34557999999966431
Q ss_pred CCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 148 FPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 148 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
+......|+.+|...+.+++.++.++ .++++.++-|+.|-.+
T Consensus 151 -~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~V~PG~i~T~ 194 (259)
T d1xq1a_ 151 -SASVGSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATP 194 (259)
T ss_dssp -----CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC--
T ss_pred -cccccccccccccchhhhhHHHHHHhcccCeEEEEeccCcccCH
Confidence 23345689999999999999888774 2789999999887544
|
| >d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.87 E-value=2.7e-21 Score=163.99 Aligned_cols=169 Identities=18% Similarity=0.130 Sum_probs=135.0
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc-C
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-Q 80 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-~ 80 (335)
+++|++|||||+++||+++++.|+++|++|++++|++....+..+++ +++..+.+|++|++++++++++ .
T Consensus 5 L~GK~~lITGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~~---------~~~~~~~~Dv~d~~~v~~~~~~~g 75 (244)
T d1pr9a_ 5 LAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVREC---------PGIEPVCVDLGDWEATERALGSVG 75 (244)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS---------TTCEEEECCTTCHHHHHHHHTTCC
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHhc---------CCCeEEEEeCCCHHHHHHHHHHhC
Confidence 57899999999999999999999999999999999754433333222 4578899999999999999987 4
Q ss_pred CCCEEEEcccccc----hhhhhcChHHHHHHhHHHHHHHHHHHHH-----cCCCEEEEeccccccCCCCCCCccCCCCCC
Q 019795 81 KFEAVIHFGALKA----VAESVQHPFRYFDNNLIGTINLYQAMAK-----YNCKKLVFSSSATIYGQPEKIPCVEDFPYG 151 (335)
Q Consensus 81 ~~d~vi~~a~~~~----~~~~~~~~~~~~~~nv~~~~~l~~~~~~-----~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~ 151 (335)
++|++||+|+... ...+.++++..+++|+.++..+.+++.+ .+..++|++||..... +..
T Consensus 76 ~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~-----------~~~ 144 (244)
T d1pr9a_ 76 PVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQR-----------AVT 144 (244)
T ss_dssp CCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTS-----------CCT
T ss_pred CceEEEeccccccccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeecccccccc-----------ccc
Confidence 8999999999743 2335577889999999999999887543 2346899999976541 233
Q ss_pred CCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 152 AMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 152 ~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
....|+.+|...+.+++.++.++ .++++.++.|+.|..+
T Consensus 145 ~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~v~T~ 185 (244)
T d1pr9a_ 145 NHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTS 185 (244)
T ss_dssp TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSH
T ss_pred chhhhhhhHHHHHHHHHHHHHHhCCCcEEEEEEeeCcCcCh
Confidence 34579999999999999988774 2789999999887554
|
| >d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), II [TaxId: 4076]
Probab=99.87 E-value=3.4e-21 Score=164.85 Aligned_cols=172 Identities=17% Similarity=0.097 Sum_probs=137.8
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
+++|++|||||++.||+++++.|+++|++|++.+|++....+..+++.... ..+.++.+|++|++++++++++
T Consensus 6 L~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g-----~~~~~~~~Dv~~~~~v~~~~~~~~ 80 (259)
T d2ae2a_ 6 LEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKG-----FKVEASVCDLSSRSERQELMNTVA 80 (259)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-----CEEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC-----CCceEEEeeCCCHHHHHHHHHHHH
Confidence 579999999999999999999999999999999998766666666554432 5678899999999998887654
Q ss_pred ---C-CCCEEEEcccccc----hhhhhcChHHHHHHhHHHHHHHHHHHH----HcCCCEEEEeccccccCCCCCCCccCC
Q 019795 80 ---Q-KFEAVIHFGALKA----VAESVQHPFRYFDNNLIGTINLYQAMA----KYNCKKLVFSSSATIYGQPEKIPCVED 147 (335)
Q Consensus 80 ---~-~~d~vi~~a~~~~----~~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~v~~Ss~~vyg~~~~~~~~e~ 147 (335)
. ++|++||+||... ...+.++++.++++|+.++..+.+++. +.+-.++|++||.....
T Consensus 81 ~~~~~~idilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~---------- 150 (259)
T d2ae2a_ 81 NHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGAL---------- 150 (259)
T ss_dssp HHTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTS----------
T ss_pred HHhCCCceEEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhccccccccccccccc----------
Confidence 2 6899999999742 233556788999999999999998754 34456999999966431
Q ss_pred CCCCCCChhHHhHHHHHHHHHHHHhhCC--CCeEEEEecccccC
Q 019795 148 FPYGAMNPYGRTKQWCEEIAFDVQKADP--EWRIILLRYFNPVG 189 (335)
Q Consensus 148 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~~--~~~~~~lR~~~v~G 189 (335)
+......|+.+|...+.+++.++.++. ++++.++.|+.|-.
T Consensus 151 -~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T 193 (259)
T d2ae2a_ 151 -AVPYEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIAT 193 (259)
T ss_dssp -CCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCS
T ss_pred -ccccccchHHHHHHHHHHHHHHHHHhCcCceEEEEeeeCcccC
Confidence 233446799999999999999988752 78999999988744
|
| >d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Peroxisomal trans 2-enoyl CoA reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.86 E-value=3.1e-21 Score=168.12 Aligned_cols=178 Identities=18% Similarity=0.141 Sum_probs=141.9
Q ss_pred CCCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc-
Q 019795 1 MASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS- 79 (335)
Q Consensus 1 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~- 79 (335)
|+++|++|||||+++||+++++.|+++|++|++++|+........+++..........++..+.+|++|+++++++++.
T Consensus 9 ~L~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~ 88 (297)
T d1yxma1 9 LLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKST 88 (297)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHHH
Confidence 5799999999999999999999999999999999998777666666665543333346789999999999999988875
Q ss_pred ----CCCCEEEEcccccc----hhhhhcChHHHHHHhHHHHHHHHHHHHH----cCCCEEEEeccccccCCCCCCCccCC
Q 019795 80 ----QKFEAVIHFGALKA----VAESVQHPFRYFDNNLIGTINLYQAMAK----YNCKKLVFSSSATIYGQPEKIPCVED 147 (335)
Q Consensus 80 ----~~~d~vi~~a~~~~----~~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~v~~Ss~~vyg~~~~~~~~e~ 147 (335)
.++|++||+|+... ...+.++++..+++|+.++..+++++.. .+..++|++|+....
T Consensus 89 ~~~~G~iDiLVnnAg~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~Ii~~ss~~~~----------- 157 (297)
T d1yxma1 89 LDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTKA----------- 157 (297)
T ss_dssp HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCCTT-----------
T ss_pred HHHhCCeEEEEeeccccccCchhhhhhhhhhhhhcccccchhhHHHHHHHhhccccccccccccccccc-----------
Confidence 48999999998642 2234567888999999999999998643 334578888764432
Q ss_pred CCCCCCChhHHhHHHHHHHHHHHHhhCC--CCeEEEEecccccCC
Q 019795 148 FPYGAMNPYGRTKQWCEEIAFDVQKADP--EWRIILLRYFNPVGA 190 (335)
Q Consensus 148 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~~--~~~~~~lR~~~v~G~ 190 (335)
.......|+.+|...+.+++.++.+.. ++++.++.|+.|..+
T Consensus 158 -~~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~ 201 (297)
T d1yxma1 158 -GFPLAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQ 201 (297)
T ss_dssp -CCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCT
T ss_pred -cccccccchhHHHHHHHHHHHHHHHhcccCceEEEeeeCcCcCc
Confidence 222345799999999999999988752 789999999988654
|
| >d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Xylitol dehydrogenase species: Gluconobacter oxydans [TaxId: 442]
Probab=99.86 E-value=2.5e-21 Score=165.88 Aligned_cols=173 Identities=18% Similarity=0.169 Sum_probs=138.8
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
+++|++|||||+++||+++++.|+++|++|++++|++...+...+.+.+. ..++..+.+|++|+++++++++.
T Consensus 3 L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~-----g~~~~~~~~Dv~~~~~v~~~~~~~~ 77 (260)
T d1zema1 3 FNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREK-----GVEARSYVCDVTSEEAVIGTVDSVV 77 (260)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT-----TSCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc-----CCcEEEEEccCCCHHHHHHHHHHHH
Confidence 57899999999999999999999999999999999866665555555432 25788999999999999888875
Q ss_pred ---CCCCEEEEcccccc-----hhhhhcChHHHHHHhHHHHHHHHHHHH----HcCCCEEEEeccccccCCCCCCCccCC
Q 019795 80 ---QKFEAVIHFGALKA-----VAESVQHPFRYFDNNLIGTINLYQAMA----KYNCKKLVFSSSATIYGQPEKIPCVED 147 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~-----~~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~v~~Ss~~vyg~~~~~~~~e~ 147 (335)
.++|++||+||... ...+.++++..+++|+.++..+++++. +.+-.++|++||...+.
T Consensus 78 ~~~g~iDilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~---------- 147 (260)
T d1zema1 78 RDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVK---------- 147 (260)
T ss_dssp HHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHS----------
T ss_pred HHhCCCCeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhhcCCCCCeeechhhcc----------
Confidence 48999999998632 223556788999999999999999854 34556999999976541
Q ss_pred CCCCCCChhHHhHHHHHHHHHHHHhhCC--CCeEEEEecccccCC
Q 019795 148 FPYGAMNPYGRTKQWCEEIAFDVQKADP--EWRIILLRYFNPVGA 190 (335)
Q Consensus 148 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~~--~~~~~~lR~~~v~G~ 190 (335)
+......|+.+|...+.+++.++.++. ++++.++.|+.|-.+
T Consensus 148 -~~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~ 191 (260)
T d1zema1 148 -GPPNMAAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPG 191 (260)
T ss_dssp -CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSS
T ss_pred -CCcchHHHHHHHHHHHHHHHHHHHHhhhhCCEEEEeccCcccCc
Confidence 223345799999999999998887742 789999999887543
|
| >d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Retinal dehydrogenase/reductase 3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.86 E-value=1.9e-21 Score=165.26 Aligned_cols=168 Identities=20% Similarity=0.187 Sum_probs=132.7
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
+++|++|||||++.||+++++.|+++|++|++++|++.......+++ ++..++.+|++|++++++++++
T Consensus 4 l~GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~---------~~~~~~~~Dvs~~~~v~~~~~~~~ 74 (250)
T d1ydea1 4 YAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQEL---------PGAVFILCDVTQEDDVKTLVSETI 74 (250)
T ss_dssp TTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC---------TTEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc---------CCCeEEEccCCCHHHHHHHHHHHH
Confidence 57899999999999999999999999999999998654433332222 4578899999999999988875
Q ss_pred ---CCCCEEEEcccccc----h-hhhhcChHHHHHHhHHHHHHHHHHHHHc---CCCEEEEeccccccCCCCCCCccCCC
Q 019795 80 ---QKFEAVIHFGALKA----V-AESVQHPFRYFDNNLIGTINLYQAMAKY---NCKKLVFSSSATIYGQPEKIPCVEDF 148 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~----~-~~~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~~v~~Ss~~vyg~~~~~~~~e~~ 148 (335)
.++|++||+||... . ..+.++++..+++|+.++.++++++.+. +-.++|++||....-
T Consensus 75 ~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~Ii~isS~~~~~----------- 143 (250)
T d1ydea1 75 RRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGAI----------- 143 (250)
T ss_dssp HHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHHHH-----------
T ss_pred HhcCCCCEEEecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhCCCCCcccccccccc-----------
Confidence 48999999999532 1 2245678899999999999999985432 226999999976541
Q ss_pred CCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccC
Q 019795 149 PYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVG 189 (335)
Q Consensus 149 ~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G 189 (335)
+......|+.+|...+.+.+.++.++ .++++.++.|+.|--
T Consensus 144 ~~~~~~~Y~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~i~T 186 (250)
T d1ydea1 144 GQAQAVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWT 186 (250)
T ss_dssp CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCC
T ss_pred cccCcchhHHHHhhHHHHHHHHHHHhcccCeEEEEEeeCCCCC
Confidence 23344689999999999999988774 279999999988743
|
| >d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sorbitol dehydrogenase species: Rhodobacter sphaeroides [TaxId: 1063]
Probab=99.86 E-value=2.7e-21 Score=165.24 Aligned_cols=170 Identities=18% Similarity=0.119 Sum_probs=134.9
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
+++|++|||||+++||+++++.|+++|++|++.+|+........+++ +.++..+.+|++|+++++++++.
T Consensus 3 L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~--------~~~~~~~~~Dvt~~~~v~~~~~~~~ 74 (256)
T d1k2wa_ 3 LDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEI--------GPAACAIALDVTDQASIDRCVAELL 74 (256)
T ss_dssp TTTEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHHHHHH--------CTTEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh--------CCceEEEEeeCCCHHHHHHHHHHHH
Confidence 57899999999999999999999999999999999755444333332 25788999999999999988875
Q ss_pred ---CCCCEEEEcccccc----hhhhhcChHHHHHHhHHHHHHHHHHHHH----c-CCCEEEEeccccccCCCCCCCccCC
Q 019795 80 ---QKFEAVIHFGALKA----VAESVQHPFRYFDNNLIGTINLYQAMAK----Y-NCKKLVFSSSATIYGQPEKIPCVED 147 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~----~~~~~~~~~~~~~~nv~~~~~l~~~~~~----~-~~~~~v~~Ss~~vyg~~~~~~~~e~ 147 (335)
.++|++||+||... ...+.++++..+++|+.++..+++++.. . +..+||++||.+.+
T Consensus 75 ~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~----------- 143 (256)
T d1k2wa_ 75 DRWGSIDILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAGR----------- 143 (256)
T ss_dssp HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGT-----------
T ss_pred HHhCCccEEEeecccccccccccCCHHHHHhhhceeeeccccchhhccchhHHhccCCccccccchhhc-----------
Confidence 58999999999743 2235567889999999999999987432 2 34689999997654
Q ss_pred CCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 148 FPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 148 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
.+......|+.+|...+.+++.++.++ .++++.++.|+.+-.+
T Consensus 144 ~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~i~T~ 188 (256)
T d1k2wa_ 144 RGEALVGVYCATKAAVISLTQSAGLNLIRHGINVNAIAPGVVDGE 188 (256)
T ss_dssp SCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCT
T ss_pred cccccccchhhhhhHHHHHHHHHHHHhcccCeEEEEEecCCCCch
Confidence 133344689999999999999888763 2789999999877544
|
| >d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Streptomyces coelicolor [TaxId: 1902]
Probab=99.86 E-value=3e-21 Score=165.12 Aligned_cols=169 Identities=13% Similarity=0.115 Sum_probs=137.4
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc----
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS---- 79 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~---- 79 (335)
+|++|||||+++||+++++.|+++|++|++.+|++....+..+.+.+.. .++.++.+|++|+++++++++.
T Consensus 2 gKValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~g-----~~~~~~~~Dvs~~~~v~~~~~~~~~~ 76 (257)
T d2rhca1 2 SEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAG-----VEADGRTCDVRSVPEIEALVAAVVER 76 (257)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-----CCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC-----CcEEEEEeecCCHHHHHHHHHHHHHH
Confidence 7899999999999999999999999999999998766666666665432 5788999999999999988875
Q ss_pred -CCCCEEEEcccccc----hhhhhcChHHHHHHhHHHHHHHHHHHHH------cCCCEEEEeccccccCCCCCCCccCCC
Q 019795 80 -QKFEAVIHFGALKA----VAESVQHPFRYFDNNLIGTINLYQAMAK------YNCKKLVFSSSATIYGQPEKIPCVEDF 148 (335)
Q Consensus 80 -~~~d~vi~~a~~~~----~~~~~~~~~~~~~~nv~~~~~l~~~~~~------~~~~~~v~~Ss~~vyg~~~~~~~~e~~ 148 (335)
.++|++|||||... ...+.++++..+++|+.++.++++++.+ .+..++|++||...+-
T Consensus 77 ~g~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~~g~Ii~i~S~~~~~----------- 145 (257)
T d2rhca1 77 YGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQ----------- 145 (257)
T ss_dssp TCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHTEEEEEEECCGGGTS-----------
T ss_pred hCCCCEEEecccccCCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcCCccccccccccccc-----------
Confidence 48999999999743 2335667889999999999999998753 2445899999876541
Q ss_pred CCCCCChhHHhHHHHHHHHHHHHhhCC--CCeEEEEeccccc
Q 019795 149 PYGAMNPYGRTKQWCEEIAFDVQKADP--EWRIILLRYFNPV 188 (335)
Q Consensus 149 ~~~~~~~Y~~sK~~~E~~~~~~~~~~~--~~~~~~lR~~~v~ 188 (335)
+......|+.+|...+.+++.++.++. ++++.++.|+.|-
T Consensus 146 ~~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~ 187 (257)
T d2rhca1 146 GVVHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVE 187 (257)
T ss_dssp CCTTCHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECSBC
T ss_pred ccccchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCC
Confidence 233346799999999999999998852 6889999998773
|
| >d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: R-specific alcohol dehydrogenase species: Lactobacillus brevis [TaxId: 1580]
Probab=99.86 E-value=2.7e-21 Score=164.73 Aligned_cols=172 Identities=16% Similarity=0.149 Sum_probs=134.8
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
+++|++|||||+++||+++++.|+++|++|++++|+....+...+.+.. +.++.++.+|++|+++++++++.
T Consensus 4 L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~------~~~~~~~~~Dv~~~~~v~~~~~~~~ 77 (251)
T d1zk4a1 4 LDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGT------PDQIQFFQHDSSDEDGWTKLFDATE 77 (251)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC------TTTEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCC------CCcEEEEEccCCCHHHHHHHHHHHH
Confidence 5789999999999999999999999999999999976544444443321 25788999999999999888875
Q ss_pred ---CCCCEEEEcccccc----hhhhhcChHHHHHHhHHHHHHHHHHHHH----cCC-CEEEEeccccccCCCCCCCccCC
Q 019795 80 ---QKFEAVIHFGALKA----VAESVQHPFRYFDNNLIGTINLYQAMAK----YNC-KKLVFSSSATIYGQPEKIPCVED 147 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~----~~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~-~~~v~~Ss~~vyg~~~~~~~~e~ 147 (335)
+++|++||+|+... ...+.++++..+++|+.++..+++++.. .+. .++|++||...+
T Consensus 78 ~~~G~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~~~~----------- 146 (251)
T d1zk4a1 78 KAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGF----------- 146 (251)
T ss_dssp HHHSSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGT-----------
T ss_pred HHhCCceEEEeccccccccchhcccccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeecccee-----------
Confidence 58999999999743 2235567788999999999999998643 333 378999996643
Q ss_pred CCCCCCChhHHhHHHHHHHHHHHHhh----CCCCeEEEEecccccCC
Q 019795 148 FPYGAMNPYGRTKQWCEEIAFDVQKA----DPEWRIILLRYFNPVGA 190 (335)
Q Consensus 148 ~~~~~~~~Y~~sK~~~E~~~~~~~~~----~~~~~~~~lR~~~v~G~ 190 (335)
.+......|+.+|...+.+.+.++.+ ..++++.++.|+.|-.+
T Consensus 147 ~~~~~~~~Y~asKaal~~lt~~lA~e~~l~~~gIrVN~I~PG~i~T~ 193 (251)
T d1zk4a1 147 VGDPSLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTP 193 (251)
T ss_dssp SCCTTCHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCH
T ss_pred ccCCCchhHHHHHHHHhcchHHHHHHHhcCCCcEEEEEEeCCCCCCh
Confidence 12233457999999999998887654 23899999999887543
|
| >d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 17-beta-hydroxysteroid dehydrogenase type XI species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.86 E-value=1.7e-21 Score=164.93 Aligned_cols=172 Identities=17% Similarity=0.107 Sum_probs=137.3
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
+.+|+|+||||+++||++++++|+++|++|++.+|+..+..+..+++... +.++..+.+|++|++++.++++.
T Consensus 5 l~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~~~~~-----~~~~~~~~~Dvs~~~~v~~~~~~i~ 79 (244)
T d1yb1a_ 5 VTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGL-----GAKVHTFVVDCSNREDIYSSAKKVK 79 (244)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-----TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc-----CCcEEEEEeeCCCHHHHHHHHHHHH
Confidence 46899999999999999999999999999999999877666666666542 25788999999999998888764
Q ss_pred ---CCCCEEEEcccccc----hhhhhcChHHHHHHhHHHHHHHHHHH----HHcCCCEEEEeccccccCCCCCCCccCCC
Q 019795 80 ---QKFEAVIHFGALKA----VAESVQHPFRYFDNNLIGTINLYQAM----AKYNCKKLVFSSSATIYGQPEKIPCVEDF 148 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~----~~~~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~ 148 (335)
..+|++|||||... ...+.+.++.++++|+.|+.++++++ ++.+-++||++||...+-
T Consensus 80 ~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G~Iv~isS~~~~~----------- 148 (244)
T d1yb1a_ 80 AEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHV----------- 148 (244)
T ss_dssp HHTCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CC-----------
T ss_pred HHcCCCceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcCCceEEEeecchhcC-----------
Confidence 47999999999742 23355677799999999999999875 344557899999976531
Q ss_pred CCCCCChhHHhHHHHHHHHHHHHhh---C--CCCeEEEEecccccC
Q 019795 149 PYGAMNPYGRTKQWCEEIAFDVQKA---D--PEWRIILLRYFNPVG 189 (335)
Q Consensus 149 ~~~~~~~Y~~sK~~~E~~~~~~~~~---~--~~~~~~~lR~~~v~G 189 (335)
+......|+.||.+.+.+.+.++.+ + .|+.+.++.||.|--
T Consensus 149 ~~~~~~~Y~asKaal~~~~~~La~El~~~~~~gI~V~~i~PG~v~T 194 (244)
T d1yb1a_ 149 SVPFLLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNT 194 (244)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHH
T ss_pred CCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCEEEEEEEcCCCCC
Confidence 2222357999999999999988865 1 378999999987633
|
| >d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.86 E-value=4.3e-21 Score=162.46 Aligned_cols=169 Identities=19% Similarity=0.126 Sum_probs=134.0
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc-C
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-Q 80 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-~ 80 (335)
+++|++|||||+++||+++++.|+++|++|++++|++....+..+++ +++..+.+|++|++++++++++ .
T Consensus 3 l~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~---------~~~~~~~~Dv~~~~~v~~~~~~~g 73 (242)
T d1cyda_ 3 FSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKEC---------PGIEPVCVDLGDWDATEKALGGIG 73 (242)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS---------TTCEEEECCTTCHHHHHHHHTTCC
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc---------CCCeEEEEeCCCHHHHHHHHHHcC
Confidence 57899999999999999999999999999999999754433332222 4678899999999999999987 4
Q ss_pred CCCEEEEcccccc----hhhhhcChHHHHHHhHHHHHHHHHHHHH----c-CCCEEEEeccccccCCCCCCCccCCCCCC
Q 019795 81 KFEAVIHFGALKA----VAESVQHPFRYFDNNLIGTINLYQAMAK----Y-NCKKLVFSSSATIYGQPEKIPCVEDFPYG 151 (335)
Q Consensus 81 ~~d~vi~~a~~~~----~~~~~~~~~~~~~~nv~~~~~l~~~~~~----~-~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~ 151 (335)
++|++||+||... ...+.++++..+++|+.++..+.+++.. . +..++|++||..... +..
T Consensus 74 ~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~-----------~~~ 142 (242)
T d1cyda_ 74 PVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHV-----------TFP 142 (242)
T ss_dssp CCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTS-----------CCT
T ss_pred CCeEEEECCccccchhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccCcccccchhhccc-----------cCC
Confidence 8999999999743 2335667888999999999999987542 2 335899999976542 223
Q ss_pred CCChhHHhHHHHHHHHHHHHhhCC--CCeEEEEecccccCC
Q 019795 152 AMNPYGRTKQWCEEIAFDVQKADP--EWRIILLRYFNPVGA 190 (335)
Q Consensus 152 ~~~~Y~~sK~~~E~~~~~~~~~~~--~~~~~~lR~~~v~G~ 190 (335)
....|+.+|...+.+++.++.++. ++++.++.|+.+-.+
T Consensus 143 ~~~~Y~asKaal~~lt~~lA~e~~~~gIrvN~I~PG~i~T~ 183 (242)
T d1cyda_ 143 NLITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTD 183 (242)
T ss_dssp TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTH
T ss_pred ccccccchHHHHHHHHHHHHHHhCccCeecccCCCCCccCH
Confidence 345799999999999999887742 789999999887543
|
| >d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase species: Bacillus megaterium [TaxId: 1404]
Probab=99.86 E-value=7.3e-21 Score=162.77 Aligned_cols=173 Identities=16% Similarity=0.134 Sum_probs=134.9
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCC-chhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc-
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNS-VPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~- 79 (335)
+++|++|||||+++||+++++.|+++|++|++++|+... .....+.+.+. ..++..+.+|++|+++++++++.
T Consensus 5 L~gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~-----g~~~~~~~~Dvt~~~~v~~~~~~~ 79 (261)
T d1geea_ 5 LEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKV-----GGEAIAVKGDVTVESDVINLVQSA 79 (261)
T ss_dssp GTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT-----TCEEEEEECCTTSHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHhc-----CCcEEEEEccCCCHHHHHHHHHHH
Confidence 478999999999999999999999999999999997543 33333444332 25688999999999999888875
Q ss_pred ----CCCCEEEEcccccc----hhhhhcChHHHHHHhHHHHHHHHHHHH----HcCC-CEEEEeccccccCCCCCCCccC
Q 019795 80 ----QKFEAVIHFGALKA----VAESVQHPFRYFDNNLIGTINLYQAMA----KYNC-KKLVFSSSATIYGQPEKIPCVE 146 (335)
Q Consensus 80 ----~~~d~vi~~a~~~~----~~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~-~~~v~~Ss~~vyg~~~~~~~~e 146 (335)
.++|++||+||... ...+.++++..+++|+.++.++++++. +.+. ..||++||.+...
T Consensus 80 ~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~~Iv~isS~~~~~--------- 150 (261)
T d1geea_ 80 IKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKI--------- 150 (261)
T ss_dssp HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTS---------
T ss_pred HHHhCCCCEeeccceecCCcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhccccccccccccccchhcc---------
Confidence 48999999999743 233556788999999999999988753 3343 3588999966431
Q ss_pred CCCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 147 DFPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 147 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
+......|+.+|...+.+.+.++.++ .++++.++.|+.|..+
T Consensus 151 --~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~ 194 (261)
T d1geea_ 151 --PWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTP 194 (261)
T ss_dssp --CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSG
T ss_pred --cCccccccccCCccchhhHHHHHHHhhhhCcEEEEEeeCcCcCH
Confidence 23334579999999999999888774 2789999999887544
|
| >d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein PA4017 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.85 E-value=4e-21 Score=159.74 Aligned_cols=150 Identities=13% Similarity=0.108 Sum_probs=113.4
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhCCC--eEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCC
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQGGF--KVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQK 81 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~ 81 (335)
.|+|||||||||||++|+++|+++|+ +|+++.|++.... +. +..+..|..++...+. ..
T Consensus 2 ~KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~~~---------------~~---~~~~~~d~~~~~~~~~-~~ 62 (212)
T d2a35a1 2 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAEH---------------PR---LDNPVGPLAELLPQLD-GS 62 (212)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCCCC---------------TT---EECCBSCHHHHGGGCC-SC
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchhhc---------------cc---ccccccchhhhhhccc-cc
Confidence 48999999999999999999999997 5666666433211 22 3334445444433332 36
Q ss_pred CCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccCCCCCCCccCCCCCCCCChhHHhHH
Q 019795 82 FEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQ 161 (335)
Q Consensus 82 ~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~Y~~sK~ 161 (335)
+|+|||++|.... .......+.+.|+.++.+++++|++.++++++++||..+++ .+.+.|+.+|.
T Consensus 63 ~d~vi~~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~a~~~~v~~~i~~Ss~~~~~-------------~~~~~y~~~K~ 127 (212)
T d2a35a1 63 IDTAFCCLGTTIK--EAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGADA-------------KSSIFYNRVKG 127 (212)
T ss_dssp CSEEEECCCCCHH--HHSSHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCT-------------TCSSHHHHHHH
T ss_pred hheeeeeeeeecc--ccccccccccchhhhhhhccccccccccccccccccccccc-------------ccccchhHHHH
Confidence 8999999987532 23445678999999999999999999999999999988763 23468999999
Q ss_pred HHHHHHHHHHhhCCCC-eEEEEecccccCCCC
Q 019795 162 WCEEIAFDVQKADPEW-RIILLRYFNPVGAHE 192 (335)
Q Consensus 162 ~~E~~~~~~~~~~~~~-~~~~lR~~~v~G~~~ 192 (335)
.+|+.+++. ++ +++++||+.|||+..
T Consensus 128 ~~E~~l~~~-----~~~~~~I~Rp~~v~G~~~ 154 (212)
T d2a35a1 128 ELEQALQEQ-----GWPQLTIARPSLLFGPRE 154 (212)
T ss_dssp HHHHHHTTS-----CCSEEEEEECCSEESTTS
T ss_pred HHhhhcccc-----ccccceeeCCcceeCCcc
Confidence 999987632 55 599999999999853
|
| >d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: meso-2,3-butanediol dehydrogenase species: Klebsiella pneumoniae [TaxId: 573]
Probab=99.85 E-value=8.7e-21 Score=162.03 Aligned_cols=169 Identities=16% Similarity=0.107 Sum_probs=134.7
Q ss_pred CeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc-----
Q 019795 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS----- 79 (335)
Q Consensus 5 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~----- 79 (335)
|.+|||||+++||+++++.|+++|++|++.+|++....+..+.+.+.. .++.++.+|++|+++++++++.
T Consensus 2 KValITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~g-----~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 76 (255)
T d1gega_ 2 KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAG-----GHAVAVKVDVSDRDQVFAAVEQARKTL 76 (255)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-----CCEEEEECCTTSHHHHHHHHHHHHHHT
T ss_pred CEEEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC-----CcEEEEEeeCCCHHHHHHHHHHHHHHh
Confidence 567999999999999999999999999999998766666666665432 5788999999999999988775
Q ss_pred CCCCEEEEcccccc----hhhhhcChHHHHHHhHHHHHHHHHHHH----HcC-CCEEEEeccccccCCCCCCCccCCCCC
Q 019795 80 QKFEAVIHFGALKA----VAESVQHPFRYFDNNLIGTINLYQAMA----KYN-CKKLVFSSSATIYGQPEKIPCVEDFPY 150 (335)
Q Consensus 80 ~~~d~vi~~a~~~~----~~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~-~~~~v~~Ss~~vyg~~~~~~~~e~~~~ 150 (335)
+++|++||+||... ...+.++++..+++|+.++.++++++. +.+ ..++|++||...+. +.
T Consensus 77 g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~-----------~~ 145 (255)
T d1gega_ 77 GGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHV-----------GN 145 (255)
T ss_dssp TCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTS-----------CC
T ss_pred CCccEEEecccccccCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhccccccccccchhhcc-----------cC
Confidence 48999999999742 233556788999999999999998853 233 35799999866531 23
Q ss_pred CCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccC
Q 019795 151 GAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVG 189 (335)
Q Consensus 151 ~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G 189 (335)
.....|+.+|...+.+++.++.+. .++++.++.|+.+-.
T Consensus 146 ~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T 186 (255)
T d1gega_ 146 PELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKT 186 (255)
T ss_dssp TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSS
T ss_pred cccccchhCHHHHHhhHHHHHHHhhhhCcEEEEEecCcccC
Confidence 344579999999999999888763 278999999987743
|
| >d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Rhizome secoisolariciresinol dehydrogenase species: Mayapple (Podophyllum peltatum) [TaxId: 35933]
Probab=99.85 E-value=1.8e-20 Score=161.28 Aligned_cols=173 Identities=18% Similarity=0.216 Sum_probs=135.9
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
+++|++|||||+++||+++++.|+++|++|++++|+....++..+++.. ...+.++.+|++|+++++++++.
T Consensus 4 L~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~------~~~~~~~~~Dv~~~~~v~~~~~~~~ 77 (268)
T d2bgka1 4 LQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGS------PDVISFVHCDVTKDEDVRNLVDTTI 77 (268)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC------TTTEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcC------CCceEEEEccCCCHHHHHHHHHHHH
Confidence 5789999999999999999999999999999999976555544444432 14678899999999999988875
Q ss_pred ---CCCCEEEEcccccch------hhhhcChHHHHHHhHHHHHHHHHHHHH----cCCCEEEEeccccccCCCCCCCccC
Q 019795 80 ---QKFEAVIHFGALKAV------AESVQHPFRYFDNNLIGTINLYQAMAK----YNCKKLVFSSSATIYGQPEKIPCVE 146 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~~------~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~v~~Ss~~vyg~~~~~~~~e 146 (335)
.++|++||+||.... ..+.++++.++++|+.++..+++++.. .+-.++|++||...+-
T Consensus 78 ~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~ii~iss~~~~~--------- 148 (268)
T d2bgka1 78 AKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFT--------- 148 (268)
T ss_dssp HHHSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTC---------
T ss_pred HHcCCcceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcCCCCccccccccccc---------
Confidence 489999999996322 223457788999999999999998643 3456899999866431
Q ss_pred CCCCCC-CChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCCC
Q 019795 147 DFPYGA-MNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGAH 191 (335)
Q Consensus 147 ~~~~~~-~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~~ 191 (335)
+..+ ...|+.+|...+.+++.++.++ .++++.++.|+.+-.+-
T Consensus 149 --~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~ 194 (268)
T d2bgka1 149 --AGEGVSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPL 194 (268)
T ss_dssp --CCTTSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCC
T ss_pred --cccccccccchhHHHHHhCHHHHHHHhChhCeEEEecCCCCccChH
Confidence 1122 2379999999999999888774 27899999999886653
|
| >d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3beta/17beta hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=99.85 E-value=6.9e-21 Score=162.25 Aligned_cols=169 Identities=15% Similarity=0.129 Sum_probs=133.1
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
+++|++|||||++.||+++++.|+++|++|++.+|++....+..+++ + .+..++.+|++|+++++++++.
T Consensus 4 L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~----~----~~~~~~~~Dv~~~~~~~~~~~~~~ 75 (253)
T d1hxha_ 4 LQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL----G----ERSMFVRHDVSSEADWTLVMAAVQ 75 (253)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH----C----TTEEEECCCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh----C----CCeEEEEeecCCHHHHHHHHHHHH
Confidence 57899999999999999999999999999999998655444333332 1 5678899999999998888775
Q ss_pred ---CCCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHHHHc---CCCEEEEeccccccCCCCCCCccCCCC
Q 019795 80 ---QKFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAMAKY---NCKKLVFSSSATIYGQPEKIPCVEDFP 149 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~~v~~Ss~~vyg~~~~~~~~e~~~ 149 (335)
.++|++||+||.... ..+.++++..+++|+.++..+++++... +-.+||++||.... .+
T Consensus 76 ~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~G~Iv~isS~~~~-----------~~ 144 (253)
T d1hxha_ 76 RRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASVSSW-----------LP 144 (253)
T ss_dssp HHHCSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCGGGT-----------SC
T ss_pred HHhCCCCeEEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCceecccchhhh-----------cC
Confidence 489999999997432 2345678899999999999999986542 23689999996653 12
Q ss_pred CCCCChhHHhHHHHHHHHHHHHhhC----CCCeEEEEecccccC
Q 019795 150 YGAMNPYGRTKQWCEEIAFDVQKAD----PEWRIILLRYFNPVG 189 (335)
Q Consensus 150 ~~~~~~Y~~sK~~~E~~~~~~~~~~----~~~~~~~lR~~~v~G 189 (335)
......|+.+|...+.+++.++.++ .++++.++.|+.+..
T Consensus 145 ~~~~~~Y~asKaal~~lt~~lA~e~~~~g~~IrVN~I~PG~i~T 188 (253)
T d1hxha_ 145 IEQYAGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYT 188 (253)
T ss_dssp CTTBHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECC
T ss_pred ccccccccchhHHHHHHHHHHHHHHhhcCCCEEEEEEeECCCcC
Confidence 3344579999999999998877653 258899999988744
|
| >d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase (5l265) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=99.85 E-value=1.4e-20 Score=161.59 Aligned_cols=176 Identities=16% Similarity=0.126 Sum_probs=134.0
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
+++|++|||||++.||++++++|+++|++|++++|+.....+..+++.+.... ..++.++.+|++|+++++++++.
T Consensus 3 l~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~~~--~~~~~~~~~Dvt~~~~v~~~~~~~~ 80 (264)
T d1spxa_ 3 FAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVS--EQNVNSVVADVTTDAGQDEILSTTL 80 (264)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCC--GGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCC--cCceEEEEccCCCHHHHHHHHHHHH
Confidence 57999999999999999999999999999999999877666666666554321 24689999999999999988875
Q ss_pred ---CCCCEEEEcccccch--------hhhhcChHHHHHHhHHHHHHHHHHHHHc---CCCEEEEecccc-ccCCCCCCCc
Q 019795 80 ---QKFEAVIHFGALKAV--------AESVQHPFRYFDNNLIGTINLYQAMAKY---NCKKLVFSSSAT-IYGQPEKIPC 144 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~~--------~~~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~~v~~Ss~~-vyg~~~~~~~ 144 (335)
.++|++||+||.... ..+.++++..+++|+.++..+++++... +...+|+++|+. ..
T Consensus 81 ~~~g~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~S~~~~~-------- 152 (264)
T d1spxa_ 81 GKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTKGEIVNISSIASGL-------- 152 (264)
T ss_dssp HHHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTTSSS--------
T ss_pred HHhCCCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCccccccCcceeeeeecccc--------
Confidence 489999999986321 1134567889999999999999986532 224666655533 22
Q ss_pred cCCCCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 145 VEDFPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 145 ~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
.+......|+.+|...+.+++.++.++ .++++.++.||.|--+
T Consensus 153 ---~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~v~T~ 197 (264)
T d1spxa_ 153 ---HATPDFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATG 197 (264)
T ss_dssp ---SCCTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCC
T ss_pred ---ccCCCchhhhhhhhhHHHHHHHHHHHhcccCeEEEEEeeCCCCCc
Confidence 122234569999999999999888774 2799999999988544
|
| >d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Mannitol dehydrogenase species: Mushroom (Agaricus bisporus) [TaxId: 5341]
Probab=99.85 E-value=4.4e-20 Score=158.11 Aligned_cols=181 Identities=19% Similarity=0.130 Sum_probs=138.3
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
+++|++|||||+++||+++++.|+++|++|++++|+.....+..+++.+..+ .++.++.+|++|++++++++++
T Consensus 7 l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~g----~~~~~~~~Dv~~~~~v~~~~~~~~ 82 (260)
T d1h5qa_ 7 FVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFG----VKTKAYQCDVSNTDIVTKTIQQID 82 (260)
T ss_dssp CTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHT----CCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhC----CceEEEEccCCCHHHHHHHHHHHH
Confidence 5789999999999999999999999999999999998887777666654433 5788999999999999888864
Q ss_pred ---CCCCEEEEcccccc----hhhhhcChHHHHHHhHHHHHHHHHHHHH----c-CCCEEEEeccccccCCCCCCCccCC
Q 019795 80 ---QKFEAVIHFGALKA----VAESVQHPFRYFDNNLIGTINLYQAMAK----Y-NCKKLVFSSSATIYGQPEKIPCVED 147 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~----~~~~~~~~~~~~~~nv~~~~~l~~~~~~----~-~~~~~v~~Ss~~vyg~~~~~~~~e~ 147 (335)
.++|++||+|+... ...+.++++..+++|+.++.++.+++.. . +...++..||.......... -
T Consensus 83 ~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~~g~i~~~~s~~~~~~~~~~----~ 158 (260)
T d1h5qa_ 83 ADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSS----L 158 (260)
T ss_dssp HHSCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEE----T
T ss_pred HHhCCCcEecccccccccCCHHHhccccccccccccccchhhhhhhhcccccccccceEEEEeeccccccccccc----c
Confidence 48999999998742 2335567889999999999999887532 2 33467777765543211000 0
Q ss_pred CCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 148 FPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 148 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
.+......|+.+|...+.+++.++.++ .++++.++.|+.|-.+
T Consensus 159 ~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~i~T~ 203 (260)
T d1h5qa_ 159 NGSLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTD 203 (260)
T ss_dssp TEECSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCG
T ss_pred ccCccccchhhhhhhHHHHHHHHHHHhchhCeEEeecCCCcccCc
Confidence 011234579999999999999888763 2789999999887543
|
| >d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), I [TaxId: 4076]
Probab=99.85 E-value=1.6e-20 Score=160.41 Aligned_cols=173 Identities=16% Similarity=0.129 Sum_probs=138.1
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
+++|+||||||++.||++++++|+++|++|++++|++...++..+.+.... ..+.++.+|++++++++++++.
T Consensus 4 L~gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~~~~~~-----~~~~~~~~D~s~~~~~~~~~~~~~ 78 (258)
T d1ae1a_ 4 LKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKG-----LNVEGSVCDLLSRTERDKLMQTVA 78 (258)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-----CCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC-----CCceEEEeecCCHHHHHHHHHHHH
Confidence 689999999999999999999999999999999998766666665554432 5678899999999998877653
Q ss_pred ----CCCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHHH----HcCCCEEEEeccccccCCCCCCCccCC
Q 019795 80 ----QKFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAMA----KYNCKKLVFSSSATIYGQPEKIPCVED 147 (335)
Q Consensus 80 ----~~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~v~~Ss~~vyg~~~~~~~~e~ 147 (335)
..+|+++|+|+.... ..+.++++..+++|+.++..+.+++. +.+..++|++||.....
T Consensus 79 ~~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~~g~ii~isS~~~~~---------- 148 (258)
T d1ae1a_ 79 HVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFS---------- 148 (258)
T ss_dssp HHTTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTS----------
T ss_pred HHhCCCcEEEeccccccccCccccCCHHHHhhhhhhcccccccccccccccccccccccccccccccccc----------
Confidence 358999999997432 23556788999999999999998754 34567999999977541
Q ss_pred CCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 148 FPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 148 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
+......|+.+|...+.+++.++.++ .++++.++.|+.+..+
T Consensus 149 -~~~~~~~Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~i~T~ 192 (258)
T d1ae1a_ 149 -ALPSVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTP 192 (258)
T ss_dssp -CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC--
T ss_pred -ccccchhHHHHHHHHHHHHHHHHHhcCcCcEEEEEEeeCcccCc
Confidence 33345579999999999999988773 2789999999988665
|
| >d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Bacterial sepiapterin reductase species: Chlorobium tepidum [TaxId: 1097]
Probab=99.85 E-value=1.3e-20 Score=159.32 Aligned_cols=170 Identities=15% Similarity=0.127 Sum_probs=134.5
Q ss_pred CeEEEEcCCChhhHHHHHHHHhCCCe-------EEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHH
Q 019795 5 KNILVTGGAGFIGTHCALQLLQGGFK-------VVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLF 77 (335)
Q Consensus 5 ~~vlItGatG~iG~~l~~~L~~~g~~-------V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~ 77 (335)
+.||||||+++||+++++.|+++|++ |+..+|+....++....+.+. +..+.++.+|++|++++++++
T Consensus 2 ~VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~-----g~~~~~~~~Dvt~~~~v~~~~ 76 (240)
T d2bd0a1 2 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAE-----GALTDTITADISDMADVRRLT 76 (240)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTT-----TCEEEEEECCTTSHHHHHHHH
T ss_pred CEEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhc-----CCcEEEEEecCCCHHHHHHHH
Confidence 45899999999999999999999987 888888766655555555432 257888999999999998887
Q ss_pred hc-----CCCCEEEEcccccc----hhhhhcChHHHHHHhHHHHHHHHHHHH----HcCCCEEEEeccccccCCCCCCCc
Q 019795 78 SS-----QKFEAVIHFGALKA----VAESVQHPFRYFDNNLIGTINLYQAMA----KYNCKKLVFSSSATIYGQPEKIPC 144 (335)
Q Consensus 78 ~~-----~~~d~vi~~a~~~~----~~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~v~~Ss~~vyg~~~~~~~ 144 (335)
+. +++|++||+|+... ...+.++++.++++|+.++..+++++. +.+-+++|++||...+.
T Consensus 77 ~~~~~~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~------- 149 (240)
T d2bd0a1 77 THIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATK------- 149 (240)
T ss_dssp HHHHHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS-------
T ss_pred HHHHHHcCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCCceEEEechhhcC-------
Confidence 75 48999999999743 223567788999999999999998854 44557999999976541
Q ss_pred cCCCCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 145 VEDFPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 145 ~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
+......|+.||...+.+.+.++.+. .++++.++.|+.+-.+
T Consensus 150 ----~~~~~~~Y~asK~al~~lt~~la~el~~~gIrvn~i~PG~v~T~ 193 (240)
T d2bd0a1 150 ----AFRHSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTP 193 (240)
T ss_dssp ----CCTTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCST
T ss_pred ----CCCCChHHHHHHHHHHHHHHHHHHHhCcCCeEEEEeeeCcccCc
Confidence 23345689999999999999887763 2789999999887544
|
| >d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein F25D1.5 species: Caenorhabditis elegans [TaxId: 6239]
Probab=99.84 E-value=2.2e-20 Score=161.12 Aligned_cols=176 Identities=15% Similarity=0.149 Sum_probs=137.1
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
+++|++|||||+++||+++++.|+++|++|++++|+....++..+++.+.... ..++..+.+|++|++++++++++
T Consensus 2 L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~ 79 (274)
T d1xhla_ 2 FSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVP--AEKINAVVADVTEASGQDDIINTTL 79 (274)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCC--GGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCC--CcceEEEEeeCCCHHHHHHHHHHHH
Confidence 57999999999999999999999999999999999876666666666554321 24688999999999999888775
Q ss_pred ---CCCCEEEEcccccch------hhhhcChHHHHHHhHHHHHHHHHHHHH----cCCCEEEEeccccccCCCCCCCccC
Q 019795 80 ---QKFEAVIHFGALKAV------AESVQHPFRYFDNNLIGTINLYQAMAK----YNCKKLVFSSSATIYGQPEKIPCVE 146 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~~------~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~v~~Ss~~vyg~~~~~~~~e 146 (335)
+++|++||+||.... ..+.++++..+++|+.++..+++++.. .+-.+++++||.+...
T Consensus 80 ~~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~ii~~ss~~~~~--------- 150 (274)
T d1xhla_ 80 AKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQ--------- 150 (274)
T ss_dssp HHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSSS---------
T ss_pred HHcCCceEEEeecccccccccccccCCHHHHHHHHhhcccccccccccccccccccccccccchhhhhccc---------
Confidence 489999999986321 113456788999999999999998643 3445777877755321
Q ss_pred CCCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 147 DFPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 147 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
+......|+.+|...+.+++.++.++ .++++.++.|+.|-.+
T Consensus 151 --~~~~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~ 194 (274)
T d1xhla_ 151 --AHSGYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATG 194 (274)
T ss_dssp --CCTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSS
T ss_pred --cCCCCceehhhhhHHHHHHHHHHHHHhHhCCceeeeccCCCcCc
Confidence 22334579999999999999888763 2799999999988543
|
| >d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative dehydrogenase ARPG836 (MGC4172) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.84 E-value=2.6e-20 Score=159.13 Aligned_cols=174 Identities=20% Similarity=0.159 Sum_probs=136.2
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
+++|+||||||++.||+++++.|+++|++|++.+|+....++..+++..... +..+.++.+|++++++++++++.
T Consensus 8 lk~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~~~---~~~~~~~~~Dls~~~~v~~~v~~~~ 84 (257)
T d1xg5a_ 8 WRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGY---PGTLIPYRCDLSNEEDILSMFSAIR 84 (257)
T ss_dssp GTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC---SSEEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC---CceEEEEEccCCCHHHHHHHHHHHH
Confidence 4689999999999999999999999999999999987666666666655432 24788999999999999888775
Q ss_pred ---CCCCEEEEcccccc----hhhhhcChHHHHHHhHHHHHHHHHHHH----HcC--CCEEEEeccccccCCCCCCCccC
Q 019795 80 ---QKFEAVIHFGALKA----VAESVQHPFRYFDNNLIGTINLYQAMA----KYN--CKKLVFSSSATIYGQPEKIPCVE 146 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~----~~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~--~~~~v~~Ss~~vyg~~~~~~~~e 146 (335)
.++|++||+|+... ...+.+.++..+++|+.++.++.+++. +.+ -.++|++||.+.+..
T Consensus 85 ~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~-------- 156 (257)
T d1xg5a_ 85 SQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRV-------- 156 (257)
T ss_dssp HHHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSC--------
T ss_pred HhcCCCCEEEecccccCCCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCCCceEEEechHhcCC--------
Confidence 48999999999742 233567788999999999999888753 333 368999999765311
Q ss_pred CCCCCCCChhHHhHHHHHHHHHHHHhhC----CCCeEEEEecccc
Q 019795 147 DFPYGAMNPYGRTKQWCEEIAFDVQKAD----PEWRIILLRYFNP 187 (335)
Q Consensus 147 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~----~~~~~~~lR~~~v 187 (335)
.|......|+.+|...+.+++.++.+. .++++.++-|+.+
T Consensus 157 -~p~~~~~~Y~~sKaal~~ltr~la~el~~~~~~I~vn~i~PG~i 200 (257)
T d1xg5a_ 157 -LPLSVTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVV 200 (257)
T ss_dssp -CSCGGGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCB
T ss_pred -CCCcccHHHHHHHHHHHhCHHHHHHHHHhCCCCEEEEEEeCCCC
Confidence 122233469999999999999887642 3788999988765
|
| >d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein R05D8.7 species: Caenorhabditis elegans [TaxId: 6239]
Probab=99.84 E-value=2.9e-20 Score=160.27 Aligned_cols=176 Identities=15% Similarity=0.116 Sum_probs=133.9
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
+++|++|||||++.||+++++.|+++|++|++++|++...++..+.+.+... ...++..+.+|++|+++++++++.
T Consensus 3 L~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~~~--~~~~~~~~~~Dvs~~~~v~~~~~~~~ 80 (272)
T d1xkqa_ 3 FSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGV--SEKQVNSVVADVTTEDGQDQIINSTL 80 (272)
T ss_dssp TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTC--CGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC--CCCceEEEEccCCCHHHHHHHHHHHH
Confidence 5789999999999999999999999999999999987766666666654322 125688999999999999888875
Q ss_pred ---CCCCEEEEcccccchh--------hhhcChHHHHHHhHHHHHHHHHHHHHc---CCCEEEEecc-ccccCCCCCCCc
Q 019795 80 ---QKFEAVIHFGALKAVA--------ESVQHPFRYFDNNLIGTINLYQAMAKY---NCKKLVFSSS-ATIYGQPEKIPC 144 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~~~--------~~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~~v~~Ss-~~vyg~~~~~~~ 144 (335)
.++|++||+||..... .+.+.++..+++|+.++..+++++... +-..+|+++| .+..
T Consensus 81 ~~~g~iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~Ss~a~~-------- 152 (272)
T d1xkqa_ 81 KQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASKGEIVNVSSIVAGP-------- 152 (272)
T ss_dssp HHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSS--------
T ss_pred HHhCCceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhcccccccCCccccccchhccc--------
Confidence 4899999999974321 122347788999999999999986432 2235555554 3322
Q ss_pred cCCCCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 145 VEDFPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 145 ~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
.+......|+.+|...+.+++.++.++ .++++.++.|+.|-.+
T Consensus 153 ---~~~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~ 197 (272)
T d1xkqa_ 153 ---QAQPDFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETG 197 (272)
T ss_dssp ---SCCCSSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSS
T ss_pred ---cCCCCcchhhhHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcch
Confidence 122334579999999999999888763 2799999999887443
|
| >d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=99.84 E-value=2.2e-20 Score=158.20 Aligned_cols=169 Identities=15% Similarity=0.123 Sum_probs=132.6
Q ss_pred CeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCC-CCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc----
Q 019795 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLH-NSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS---- 79 (335)
Q Consensus 5 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~---- 79 (335)
+.||||||++.||+++++.|+++|++|++.+++. ...+...+.+... +.++.++.+|++|+++++++++.
T Consensus 2 pV~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~-----g~~~~~~~~Dv~~~~~v~~~~~~~~~~ 76 (244)
T d1edoa_ 2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAY-----GGQAITFGGDVSKEADVEAMMKTAIDA 76 (244)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHH-----TCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHc-----CCcEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 6899999999999999999999999998876543 3334444444332 25788999999999999888775
Q ss_pred -CCCCEEEEcccccc----hhhhhcChHHHHHHhHHHHHHHHHHHH----HcCCCEEEEeccccccCCCCCCCccCCCCC
Q 019795 80 -QKFEAVIHFGALKA----VAESVQHPFRYFDNNLIGTINLYQAMA----KYNCKKLVFSSSATIYGQPEKIPCVEDFPY 150 (335)
Q Consensus 80 -~~~d~vi~~a~~~~----~~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~ 150 (335)
.++|++||+|+... ...+.++++.++++|+.++.++++++. +.+-.+||++||...+- +.
T Consensus 77 ~g~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~-----------~~ 145 (244)
T d1edoa_ 77 WGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLI-----------GN 145 (244)
T ss_dssp SSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHH-----------CC
T ss_pred cCCCCccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcChhhcC-----------CC
Confidence 48999999999743 233567788999999999999998754 34557999999976541 23
Q ss_pred CCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccC
Q 019795 151 GAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVG 189 (335)
Q Consensus 151 ~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G 189 (335)
.....|+.+|...+.+.+.++.++ .++++.++.|+.+-.
T Consensus 146 ~~~~~Y~asKaal~~ltk~lA~el~~~gIrvN~I~PG~i~T 186 (244)
T d1edoa_ 146 IGQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIAS 186 (244)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCS
T ss_pred CCCHHHHHHHHHHHHChHHHHHHHhhhCcEEEEEecceecc
Confidence 334689999999999999988773 278999999987743
|
| >d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Drosophila alcohol dehydrogenase species: Fly (Drosophila lebanonensis) [TaxId: 7225]
Probab=99.83 E-value=6.9e-20 Score=156.06 Aligned_cols=170 Identities=15% Similarity=0.148 Sum_probs=133.2
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCC-CHHHHHHHHhc-
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLR-NKDDLDKLFSS- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~-d~~~~~~~~~~- 79 (335)
+++|+||||||+++||.+++++|+++|++|++++|+....... .++....+ ..++.++.+|++ +.++++++++.
T Consensus 3 l~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~-~~~~~~~~---~~~~~~~~~d~~~~~~~~~~~~~~~ 78 (254)
T d1sbya1 3 LTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTAL-AELKAINP---KVNITFHTYDVTVPVAESKKLLKKI 78 (254)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHH-HHHHHHCT---TSEEEEEECCTTSCHHHHHHHHHHH
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHH-HHHHhhCC---CCCEEEEEeecCCCHHHHHHHHHHH
Confidence 5789999999999999999999999999999998877654333 33333222 257899999997 66667766664
Q ss_pred ----CCCCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHc-------CCCEEEEeccccccCCCCCCCccCCC
Q 019795 80 ----QKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKY-------NCKKLVFSSSATIYGQPEKIPCVEDF 148 (335)
Q Consensus 80 ----~~~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~-------~~~~~v~~Ss~~vyg~~~~~~~~e~~ 148 (335)
.++|++||+||.. ..+.++.++++|+.|+.++.+++... ...++|++||...+.
T Consensus 79 ~~~~g~iDilvnnAG~~----~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~~----------- 143 (254)
T d1sbya1 79 FDQLKTVDILINGAGIL----DDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFN----------- 143 (254)
T ss_dssp HHHHSCCCEEEECCCCC----CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTS-----------
T ss_pred HHHcCCCCEEEeCCCCC----CHHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhhcc-----------
Confidence 4899999999974 36778899999999999999986531 135799999976541
Q ss_pred CCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 149 PYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 149 ~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
+......|+.+|.....+++.++.+. .++++.++.|+.|..+
T Consensus 144 ~~~~~~~Y~asKaal~~~t~~la~el~~~gIrVn~I~PG~v~T~ 187 (254)
T d1sbya1 144 AIHQVPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTP 187 (254)
T ss_dssp CCTTSHHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHhhccccCeEEEEEEeCCCcCc
Confidence 33445689999999999999888763 2789999999988653
|
| >d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase species: Pseudomonas sp., lb400 [TaxId: 306]
Probab=99.83 E-value=9.2e-20 Score=157.33 Aligned_cols=169 Identities=19% Similarity=0.174 Sum_probs=130.0
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
+++|+||||||+++||+++++.|+++|++|++++|++....+..+++ ..++..+.+|++++++++++++.
T Consensus 3 L~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~--------~~~~~~~~~Dv~~~~~~~~~~~~~~ 74 (276)
T d1bdba_ 3 LKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDH--------GDNVLGIVGDVRSLEDQKQAASRCV 74 (276)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH--------GGGEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc--------CCCeeEEecccccHHHHHHHHHHHH
Confidence 47899999999999999999999999999999999754433333222 25788999999999998888765
Q ss_pred ---CCCCEEEEcccccchh---------hhhcChHHHHHHhHHHHHHHHHHHH----HcCCCEEEEeccccccCCCCCCC
Q 019795 80 ---QKFEAVIHFGALKAVA---------ESVQHPFRYFDNNLIGTINLYQAMA----KYNCKKLVFSSSATIYGQPEKIP 143 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~~~---------~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~v~~Ss~~vyg~~~~~~ 143 (335)
.++|++||+||..... ...+.++.++++|+.++..+++++. +.+ .++|++||...+-
T Consensus 75 ~~~g~idilvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~-g~iI~i~S~~~~~------ 147 (276)
T d1bdba_ 75 ARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVASR-GNVIFTISNAGFY------ 147 (276)
T ss_dssp HHHSCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTS------
T ss_pred HHhCCcccccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhcC-CCceeeeechhcc------
Confidence 4899999999963211 1123477899999999999998854 334 5788888755331
Q ss_pred ccCCCCCCCCChhHHhHHHHHHHHHHHHhhC-CCCeEEEEecccccCC
Q 019795 144 CVEDFPYGAMNPYGRTKQWCEEIAFDVQKAD-PEWRIILLRYFNPVGA 190 (335)
Q Consensus 144 ~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-~~~~~~~lR~~~v~G~ 190 (335)
+......|+.+|...+.+++.++.+. +++++.++.|+.|-.+
T Consensus 148 -----~~~~~~~Y~asKaal~~ltr~lA~ela~~IrVN~I~PG~i~T~ 190 (276)
T d1bdba_ 148 -----PNGGGPLYTAAKHAIVGLVRELAFELAPYVRVNGVGSGGINSD 190 (276)
T ss_dssp -----TTSSCHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCSC
T ss_pred -----CCCCCchHHHHHHHHHHHHHHHHHHhhcceEEcccCCCCEecC
Confidence 22334579999999999999988774 4689999999887543
|
| >d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase sniffer species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=99.83 E-value=1.7e-19 Score=153.34 Aligned_cols=173 Identities=18% Similarity=0.088 Sum_probs=130.3
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHh---CCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQ---GGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS 79 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~---~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~ 79 (335)
+||+||||||+++||++++++|++ +|++|++.+|++....+..+.... ..++.++.+|++|+++++++++.
T Consensus 1 ~MKtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~~~~~------~~~~~~~~~Dvs~~~~v~~~~~~ 74 (248)
T d1snya_ 1 HMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKN------HSNIHILEIDLRNFDAYDKLVAD 74 (248)
T ss_dssp CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHH------CTTEEEEECCTTCGGGHHHHHHH
T ss_pred CcCEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHhc------CCcEEEEEEEeccHHHHHHHHhh
Confidence 589999999999999999999974 699999999998877655432222 15789999999999888876652
Q ss_pred -------CCCCEEEEcccccch-----hhhhcChHHHHHHhHHHHHHHHHHHHH----c-----------CCCEEEEecc
Q 019795 80 -------QKFEAVIHFGALKAV-----AESVQHPFRYFDNNLIGTINLYQAMAK----Y-----------NCKKLVFSSS 132 (335)
Q Consensus 80 -------~~~d~vi~~a~~~~~-----~~~~~~~~~~~~~nv~~~~~l~~~~~~----~-----------~~~~~v~~Ss 132 (335)
.++|++||+||.... ..+.++++.++++|+.|+..+++++.. . +..++|++||
T Consensus 75 i~~~~~~~~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii~i~S 154 (248)
T d1snya_ 75 IEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSS 154 (248)
T ss_dssp HHHHHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECC
T ss_pred hHHHhhcCCcceEEeeccccccCcccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhccccccccccccccccccc
Confidence 479999999997322 223445778999999999999987532 1 2358999998
Q ss_pred ccccCCCCCCCccCCCCCCCCChhHHhHHHHHHHHHHHHhhCC--CCeEEEEecccccC
Q 019795 133 ATIYGQPEKIPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKADP--EWRIILLRYFNPVG 189 (335)
Q Consensus 133 ~~vyg~~~~~~~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~--~~~~~~lR~~~v~G 189 (335)
.... ... .+......|+.||.....+.+.++.++. ++.+.++.||.|--
T Consensus 155 ~~g~--~~~------~~~~~~~~Y~aSKaal~~lt~~la~e~~~~gI~vn~v~PG~v~T 205 (248)
T d1snya_ 155 ILGS--IQG------NTDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKT 205 (248)
T ss_dssp GGGC--STT------CCSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCS
T ss_pred cccc--cCC------CCCCChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCCcccC
Confidence 5422 110 1223345799999999999988876642 78999999988744
|
| >d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 15-hydroxyprostaglandin dehydrogenase, PGDH species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.83 E-value=1e-19 Score=155.20 Aligned_cols=168 Identities=18% Similarity=0.126 Sum_probs=132.2
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc---
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS--- 79 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~--- 79 (335)
.+|++|||||+++||+++++.|+++|++|++++|+..+..+....+.+..+ +.++.++.+|++|+++++++++.
T Consensus 2 ~GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~ 78 (254)
T d2gdza1 2 NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFE---PQKTLFIQCDVADQQQLRDTFRKVVD 78 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSC---GGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcC---CCcEEEEEeecCCHHHHHHHHHHHHH
Confidence 579999999999999999999999999999999987666665555544322 25788999999999999988875
Q ss_pred --CCCCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHH----cC---CCEEEEeccccccCCCCCCCccCCCCC
Q 019795 80 --QKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAK----YN---CKKLVFSSSATIYGQPEKIPCVEDFPY 150 (335)
Q Consensus 80 --~~~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~---~~~~v~~Ss~~vyg~~~~~~~~e~~~~ 150 (335)
+++|++||+|+... ..++++.+++|+.++.++.+.+.. .+ ..+||++||.+.+ .+.
T Consensus 79 ~~G~iDilVnnAg~~~----~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~~-----------~~~ 143 (254)
T d2gdza1 79 HFGRLDILVNNAGVNN----EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGL-----------MPV 143 (254)
T ss_dssp HHSCCCEEEECCCCCC----SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGT-----------SCC
T ss_pred HcCCcCeecccccccc----cccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhhc-----------cCC
Confidence 48999999999853 456789999999999888887643 21 2479999997653 133
Q ss_pred CCCChhHHhHHHHHHHHHH--HHhh--CCCCeEEEEeccccc
Q 019795 151 GAMNPYGRTKQWCEEIAFD--VQKA--DPEWRIILLRYFNPV 188 (335)
Q Consensus 151 ~~~~~Y~~sK~~~E~~~~~--~~~~--~~~~~~~~lR~~~v~ 188 (335)
.....|+.||...+.+++. .+.+ ..++++.++.|+.|-
T Consensus 144 ~~~~~Y~asKaal~~ltrs~ala~e~~~~gIrVN~I~PG~i~ 185 (254)
T d2gdza1 144 AQQPVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVN 185 (254)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBS
T ss_pred CCccchHHHHHHHHHHHHHHHHHHHhcCCCEEEEEEEcCCCC
Confidence 3445799999999998874 2332 227999999998773
|
| >d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sepiapterin reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.82 E-value=1.4e-19 Score=155.01 Aligned_cols=174 Identities=16% Similarity=0.123 Sum_probs=137.7
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHh---CCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHh
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQ---GGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFS 78 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~---~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~ 78 (335)
|++|+++||||+++||+++++.|++ +|++|++++|+....+...+++....+ ..++.++.+|++++++++++++
T Consensus 4 L~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~~l~~~~~---~~~~~~~~~Dvs~~~~v~~l~~ 80 (259)
T d1oaaa_ 4 LGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQP---DLKVVLAAADLGTEAGVQRLLS 80 (259)
T ss_dssp CBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCT---TSEEEEEECCTTSHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHHHHHhhcC---CceEEEEEccCCCHHHHHHHHH
Confidence 5789999999999999999999986 699999999987766666666654332 2578899999999999888874
Q ss_pred c---------CCCCEEEEcccccch-------hhhhcChHHHHHHhHHHHHHHHHHHHHc----C--CCEEEEecccccc
Q 019795 79 S---------QKFEAVIHFGALKAV-------AESVQHPFRYFDNNLIGTINLYQAMAKY----N--CKKLVFSSSATIY 136 (335)
Q Consensus 79 ~---------~~~d~vi~~a~~~~~-------~~~~~~~~~~~~~nv~~~~~l~~~~~~~----~--~~~~v~~Ss~~vy 136 (335)
. ..+|++||+|+.... ..+.+.++.++++|+.++..+++++... + ..++|++||...+
T Consensus 81 ~~~~~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~~~g~Iv~isS~~~~ 160 (259)
T d1oaaa_ 81 AVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCAL 160 (259)
T ss_dssp HHHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGT
T ss_pred HHHHhhhhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCccccccccccccc
Confidence 2 256799999986321 1233567789999999999999997653 1 2479999997653
Q ss_pred CCCCCCCccCCCCCCCCChhHHhHHHHHHHHHHHHhhCCCCeEEEEecccccC
Q 019795 137 GQPEKIPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKADPEWRIILLRYFNPVG 189 (335)
Q Consensus 137 g~~~~~~~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~lR~~~v~G 189 (335)
.+......|+.||...+.+++.++.+.+++++.++.||.|-.
T Consensus 161 -----------~~~~~~~~Y~asKaal~~lt~~la~e~~gIrVn~v~PG~i~T 202 (259)
T d1oaaa_ 161 -----------QPYKGWGLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDN 202 (259)
T ss_dssp -----------SCCTTCHHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSS
T ss_pred -----------CCCccchHHHHHHHHHHHHHHHHHhCCCCCEEEEEEcCCCCC
Confidence 133445689999999999999999988899999999987744
|
| >d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus, TTHB020 [TaxId: 274]
Probab=99.82 E-value=4.2e-20 Score=156.28 Aligned_cols=168 Identities=20% Similarity=0.173 Sum_probs=130.0
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
+++|++|||||++.||+++++.|+++|++|++.+|+.....+..+++ ..++.++++|++++++++++++.
T Consensus 3 l~gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~--------~~~~~~~~~Dls~~~~i~~~~~~i~ 74 (241)
T d2a4ka1 3 LSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAAL--------EAEAIAVVADVSDPKAVEAVFAEAL 74 (241)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTC--------CSSEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc--------CCceEEEEecCCCHHHHHHHHHHHH
Confidence 67999999999999999999999999999999999755433332222 26788999999999999888775
Q ss_pred ---CCCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHHHHc--CCCEEEEeccccccCCCCCCCccCCCCC
Q 019795 80 ---QKFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAMAKY--NCKKLVFSSSATIYGQPEKIPCVEDFPY 150 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~~ 150 (335)
.++|++||+|+.... ..+.++++..+++|+.++..+++++... +.+.++++||.+.. +.
T Consensus 75 ~~~g~iDiLinnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~~~i~~~ss~a~~------------~~ 142 (241)
T d2a4ka1 75 EEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGL------------GA 142 (241)
T ss_dssp HHHSCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTC------------CH
T ss_pred HHhCCccEeccccccccccchhhhhccccccccccccccccccccccccccccccceeeccccccc------------cc
Confidence 489999999986422 2345677789999999999999997664 23455555554432 11
Q ss_pred CCCChhHHhHHHHHHHHHHHHhhCC--CCeEEEEecccccC
Q 019795 151 GAMNPYGRTKQWCEEIAFDVQKADP--EWRIILLRYFNPVG 189 (335)
Q Consensus 151 ~~~~~Y~~sK~~~E~~~~~~~~~~~--~~~~~~lR~~~v~G 189 (335)
.....|+.+|...|.+++.++.++. ++++.++.||.+-.
T Consensus 143 ~~~~~Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~v~T 183 (241)
T d2a4ka1 143 FGLAHYAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQT 183 (241)
T ss_dssp HHHHHHHHCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCC
T ss_pred cCccccchhhHHHHHHHHHHHHHHhHhCCEEeeeccCcCCC
Confidence 2234699999999999999988842 68999999988743
|
| >d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 11-beta-hydroxysteroid dehydrogenase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.82 E-value=1.6e-19 Score=155.39 Aligned_cols=172 Identities=17% Similarity=0.192 Sum_probs=134.0
Q ss_pred CCCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc-
Q 019795 1 MASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS- 79 (335)
Q Consensus 1 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~- 79 (335)
|+++|++||||||++||+++++.|+++|++|++++|+.....+..+++....+ .....+.+|+.+.+.+..+++.
T Consensus 11 ~L~GK~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~~~~~~~~----~~~~~~~~d~~~~~~~~~~~~~~ 86 (269)
T d1xu9a_ 11 MLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGA----ASAHYIAGTMEDMTFAEQFVAQA 86 (269)
T ss_dssp GGTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTC----SEEEEEECCTTCHHHHHHHHHHH
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhhhhc----ccchhhhhhhhhHHHHHHHHHHH
Confidence 68899999999999999999999999999999999987766666555544433 5678889999998877765553
Q ss_pred ----CCCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHHHH---cCCCEEEEeccccccCCCCCCCccCCC
Q 019795 80 ----QKFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAMAK---YNCKKLVFSSSATIYGQPEKIPCVEDF 148 (335)
Q Consensus 80 ----~~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~---~~~~~~v~~Ss~~vyg~~~~~~~~e~~ 148 (335)
..+|+++|+|+.... ..+.++++..+++|+.++..+++++.. .+-+++|++||.+.+ .
T Consensus 87 ~~~~g~~~~li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~~G~ii~isS~~~~-----------~ 155 (269)
T d1xu9a_ 87 GKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGK-----------V 155 (269)
T ss_dssp HHHHTSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGGT-----------S
T ss_pred HHHhCCccccccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhcCCcceEeccchhc-----------C
Confidence 478999999987432 224456678899999999998888643 123689999997654 1
Q ss_pred CCCCCChhHHhHHHHHHHHHHHHhhC----CCCeEEEEecccc
Q 019795 149 PYGAMNPYGRTKQWCEEIAFDVQKAD----PEWRIILLRYFNP 187 (335)
Q Consensus 149 ~~~~~~~Y~~sK~~~E~~~~~~~~~~----~~~~~~~lR~~~v 187 (335)
+......|+.||+..+.+.+.++.+. .++.+..+.||.|
T Consensus 156 ~~p~~~~Y~asKaal~~~~~~La~El~~~~~~I~V~~v~PG~v 198 (269)
T d1xu9a_ 156 AYPMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLI 198 (269)
T ss_dssp CCTTCHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCB
T ss_pred CCCCchHHHHHHHHHHHHHHHHHHHhhhcCCCEEEEEEecCcC
Confidence 33445689999999999999887663 2678888999776
|
| >d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Thermus thermophilus [TaxId: 274]
Probab=99.81 E-value=3.2e-19 Score=152.43 Aligned_cols=172 Identities=15% Similarity=0.077 Sum_probs=129.7
Q ss_pred CCCCeEEEEcCCC--hhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc
Q 019795 2 ASEKNILVTGGAG--FIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS 79 (335)
Q Consensus 2 ~~~~~vlItGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~ 79 (335)
+++|++|||||+| +||++++++|+++|++|++.+|++.... ...++.... ....++.+|++|+++++++++.
T Consensus 6 L~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~-~~~~~~~~~-----~~~~~~~~D~~~~~~v~~~~~~ 79 (256)
T d1ulua_ 6 LSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRP-EAEKLAEAL-----GGALLFRADVTQDEELDALFAG 79 (256)
T ss_dssp CTTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHH-HHHHHHHHT-----TCCEEEECCTTCHHHHHHHHHH
T ss_pred CCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHH-HHHHhhhcc-----CcccccccccCCHHHHHHHHHH
Confidence 5789999999998 8999999999999999998888643322 222222221 4567899999999999988775
Q ss_pred -----CCCCEEEEcccccch--------hhhhcChHHHHHHhHHHHHHHHHHHHHc--CCCEEEEeccccccCCCCCCCc
Q 019795 80 -----QKFEAVIHFGALKAV--------AESVQHPFRYFDNNLIGTINLYQAMAKY--NCKKLVFSSSATIYGQPEKIPC 144 (335)
Q Consensus 80 -----~~~d~vi~~a~~~~~--------~~~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~v~~Ss~~vyg~~~~~~~ 144 (335)
.++|++||+|+.... ....++++..+++|+.++..+++++... .-+++|++||.....
T Consensus 80 ~~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~Iv~isS~~~~~------- 152 (256)
T d1ulua_ 80 VKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEK------- 152 (256)
T ss_dssp HHHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTS-------
T ss_pred HHHhcCCceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhccCCEEEEEeehHhcC-------
Confidence 489999999987422 1233456678999999999999987643 125899999866531
Q ss_pred cCCCCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 145 VEDFPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 145 ~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
+......|+.+|...+.+++.++.++ .++++.++.|+.+..+
T Consensus 153 ----~~~~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~I~PG~i~t~ 196 (256)
T d1ulua_ 153 ----VVPKYNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTV 196 (256)
T ss_dssp ----BCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC---
T ss_pred ----CCCCchHHHHHHHHHHHHHHHHHHHhcccCCEEeeeccceeeec
Confidence 23345679999999999999988774 2789999999887554
|
| >d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.80 E-value=2.5e-19 Score=156.20 Aligned_cols=171 Identities=18% Similarity=0.112 Sum_probs=128.5
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCc-----hhhHHhhhhhcCCccccceeEEEccCCCHHHHHHH
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSV-----PEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKL 76 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-----~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~ 76 (335)
+++|++|||||+++||+++++.|+++|++|++.+|+.... ....+++.+... .....+.+|++|.++++++
T Consensus 5 l~gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~d~~~~~~~~~~ 80 (302)
T d1gz6a_ 5 FDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIR----RRGGKAVANYDSVEAGEKL 80 (302)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHH----HTTCEEEEECCCGGGHHHH
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHh----hcccccccccchHHHHHHH
Confidence 5789999999999999999999999999999998865321 122222221111 3445677899888776666
Q ss_pred Hhc-----CCCCEEEEcccccc----hhhhhcChHHHHHHhHHHHHHHHHHH----HHcCCCEEEEeccccccCCCCCCC
Q 019795 77 FSS-----QKFEAVIHFGALKA----VAESVQHPFRYFDNNLIGTINLYQAM----AKYNCKKLVFSSSATIYGQPEKIP 143 (335)
Q Consensus 77 ~~~-----~~~d~vi~~a~~~~----~~~~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~v~~Ss~~vyg~~~~~~ 143 (335)
++. +++|++|||||... ...+.++++.++++|+.++.++++++ ++.+-++||++||....-
T Consensus 81 v~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV~isS~~~~~------ 154 (302)
T d1gz6a_ 81 VKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIY------ 154 (302)
T ss_dssp HHHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHH------
T ss_pred HHHHHHHcCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCcEEEEeCChhhcC------
Confidence 553 48999999999743 23355678899999999999999985 444557999999966431
Q ss_pred ccCCCCCCCCChhHHhHHHHHHHHHHHHhhCC--CCeEEEEecccc
Q 019795 144 CVEDFPYGAMNPYGRTKQWCEEIAFDVQKADP--EWRIILLRYFNP 187 (335)
Q Consensus 144 ~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~--~~~~~~lR~~~v 187 (335)
+......|+.+|...+.+.+.++.+.. ++++.++.|+.+
T Consensus 155 -----~~~~~~~Y~asKaal~~lt~~la~E~~~~gIrVN~I~PG~~ 195 (302)
T d1gz6a_ 155 -----GNFGQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAG 195 (302)
T ss_dssp -----CCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECC
T ss_pred -----CCCCcHHHHHHHHHHHHHHHHHHHHHhccCCceeeeCCCCC
Confidence 223346899999999999999888742 789999999865
|
| >d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.80 E-value=1.2e-18 Score=150.85 Aligned_cols=172 Identities=16% Similarity=0.112 Sum_probs=129.0
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhCCCeEEEEe---cCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc-
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQGGFKVVLID---NLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS- 79 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~---r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~- 79 (335)
.|.||||||+++||+++++.|+++|++|+.+. |+........+....+. ..+.++..+.+|++|++++.++++.
T Consensus 2 kkVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~--~~~~~~~~~~~Dv~~~~~~~~~~~~~ 79 (285)
T d1jtva_ 2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALA--CPPGSLETLQLDVRDSKSVAAARERV 79 (285)
T ss_dssp CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTT--CCTTSEEEEECCTTCHHHHHHHHHTC
T ss_pred CCEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHh--ccCCceEEEeccccchHhhhhhhhhc
Confidence 57789999999999999999999998765543 33222222222222221 1236789999999999999988875
Q ss_pred --CCCCEEEEcccccc----hhhhhcChHHHHHHhHHHHHHHHHHH----HHcCCCEEEEeccccccCCCCCCCccCCCC
Q 019795 80 --QKFEAVIHFGALKA----VAESVQHPFRYFDNNLIGTINLYQAM----AKYNCKKLVFSSSATIYGQPEKIPCVEDFP 149 (335)
Q Consensus 80 --~~~d~vi~~a~~~~----~~~~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~ 149 (335)
..+|+++|+|+... ...+.++++..+++|+.|+.++++++ ++.+-+++|++||.... .+
T Consensus 80 ~~g~idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G~Iv~isS~~g~-----------~~ 148 (285)
T d1jtva_ 80 TEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGL-----------MG 148 (285)
T ss_dssp TTSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGT-----------SC
T ss_pred cccchhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCCceEEEechhhc-----------CC
Confidence 47999999998743 22355677889999999999999985 44556799999997653 13
Q ss_pred CCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEeccccc
Q 019795 150 YGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPV 188 (335)
Q Consensus 150 ~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~ 188 (335)
......|+.||...+.+.+.++.+. .++++.++.||.|-
T Consensus 149 ~~~~~~Y~asKaal~~l~~~la~El~~~gIrVn~V~PG~v~ 189 (285)
T d1jtva_ 149 LPFNDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVH 189 (285)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBC
T ss_pred CCCchHHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCC
Confidence 3344679999999999999888773 27999999998774
|
| >d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Erythromycin synthase, eryAI, 1st ketoreductase module species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=99.80 E-value=8e-19 Score=150.24 Aligned_cols=173 Identities=18% Similarity=0.207 Sum_probs=130.8
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGF-KVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
..+++|||||+|+||+++++.|+++|+ +|++++|+....+...+.+.++. .....+.++.+|++|+++++++++.
T Consensus 8 p~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~--~~g~~v~~~~~Dv~d~~~~~~~~~~i~ 85 (259)
T d2fr1a1 8 PTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELE--ALGARTTVAACDVTDRESVRELLGGIG 85 (259)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHH--HTTCEEEEEECCTTCHHHHHHHHHTSC
T ss_pred CcCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHH--hccccccccccccchHHHHHHhhcccc
Confidence 467999999999999999999999998 58888887443333332222211 1125789999999999999998875
Q ss_pred --CCCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccCCCCCCCccCCCCCCCC
Q 019795 80 --QKFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQPEKIPCVEDFPYGAM 153 (335)
Q Consensus 80 --~~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~ 153 (335)
..+|.|+|+++.... ..+.+.++..++.|+.++.++.+++...+.+++|++||....- +....
T Consensus 86 ~~~~i~~vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~iv~~SS~a~~~-----------g~~~~ 154 (259)
T d2fr1a1 86 DDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELDLTAFVLFSSFASAF-----------GAPGL 154 (259)
T ss_dssp TTSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSCCSEEEEEEEHHHHT-----------CCTTC
T ss_pred ccccccccccccccccccccccccHHHHHHHhhhhccchhHHHHHhhccCCceEeeecchhhcc-----------CCccc
Confidence 368999999997432 2234456678999999999999988887778999999966431 22334
Q ss_pred ChhHHhHHHHHHHHHHHHhhCCCCeEEEEecccccCC
Q 019795 154 NPYGRTKQWCEEIAFDVQKADPEWRIILLRYFNPVGA 190 (335)
Q Consensus 154 ~~Y~~sK~~~E~~~~~~~~~~~~~~~~~lR~~~v~G~ 190 (335)
..|+.+|...+.+.++...+ |+++.++.|+.+.++
T Consensus 155 ~~YaAaka~l~~la~~~~~~--Gi~v~~I~pg~~~~~ 189 (259)
T d2fr1a1 155 GGYAPGNAYLDGLAQQRRSD--GLPATAVAWGTWAGS 189 (259)
T ss_dssp TTTHHHHHHHHHHHHHHHHT--TCCCEEEEECCBC--
T ss_pred HHHHHHHHhHHHHHHHHHhC--CCCEEECCCCcccCC
Confidence 57999999999998877654 899999999877654
|
| >d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=99.80 E-value=1.2e-18 Score=150.21 Aligned_cols=173 Identities=18% Similarity=0.103 Sum_probs=133.0
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCc-hhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc-
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSV-PEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~- 79 (335)
+++|++|||||++.||+++++.|+++|++|++++|+.... ....+.+.+. ...+.++.+|++|++++.++++.
T Consensus 16 L~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~-----g~~~~~~~~D~~~~~~v~~~~~~~ 90 (272)
T d1g0oa_ 16 LEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKN-----GSDAACVKANVGVVEDIVRMFEEA 90 (272)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT-----TCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHhh-----CCceeeEeCCCCCHHHHHHHHHHH
Confidence 6789999999999999999999999999999998865432 2333333332 25788999999999999888775
Q ss_pred ----CCCCEEEEcccccc----hhhhhcChHHHHHHhHHHHHHHHHHHHHc--CCCEEEEeccccccCCCCCCCccCCCC
Q 019795 80 ----QKFEAVIHFGALKA----VAESVQHPFRYFDNNLIGTINLYQAMAKY--NCKKLVFSSSATIYGQPEKIPCVEDFP 149 (335)
Q Consensus 80 ----~~~d~vi~~a~~~~----~~~~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~ 149 (335)
.++|++||+++... ...+.++++..+++|+.++..+++++... .-+++++++|..... .+
T Consensus 91 ~~~~g~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~g~~i~i~s~~~~~----------~~ 160 (272)
T d1g0oa_ 91 VKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQA----------KA 160 (272)
T ss_dssp HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTC----------SS
T ss_pred HHHhCCCCccccccccchhhhhhhhhhhHHHHHhhhccceeeeecccccccccccccccccccccccc----------cc
Confidence 48999999998743 23345667789999999999999998764 235777777754221 12
Q ss_pred CCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccC
Q 019795 150 YGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVG 189 (335)
Q Consensus 150 ~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G 189 (335)
......|+.+|...+.+++.++.++ .++++.++.|+.+-.
T Consensus 161 ~~~~~~Y~asKaal~~ltk~lA~e~~~~gIrVN~I~PG~v~T 202 (272)
T d1g0oa_ 161 VPKHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKT 202 (272)
T ss_dssp CSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSS
T ss_pred ccchhhHHHHHHHHHHHHHHHHHHhchhCeEEEEEccCCcCC
Confidence 3344579999999999999888774 289999999988743
|
| >d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,6,8-tetrahydroxynaphthalene reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=99.80 E-value=4.8e-19 Score=151.47 Aligned_cols=171 Identities=17% Similarity=0.123 Sum_probs=130.1
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCC-chhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc-
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNS-VPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~- 79 (335)
+.+|+||||||++.||+++++.|+++|++|++.+++... .+...+.+.+. ..++..+.+|++|+++++++++.
T Consensus 4 L~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~-----g~~~~~~~~D~~~~~~v~~~~~~~ 78 (259)
T d1ja9a_ 4 LAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKL-----GAQGVAIQADISKPSEVVALFDKA 78 (259)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT-----TCCEEEEECCTTSHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHc-----CCCceEecCCCCCHHHHHHHHHHH
Confidence 578999999999999999999999999999987665443 33334444332 25788999999999998887774
Q ss_pred ----CCCCEEEEcccccc----hhhhhcChHHHHHHhHHHHHHHHHHHHHc--CCCEEEEeccc-cccCCCCCCCccCCC
Q 019795 80 ----QKFEAVIHFGALKA----VAESVQHPFRYFDNNLIGTINLYQAMAKY--NCKKLVFSSSA-TIYGQPEKIPCVEDF 148 (335)
Q Consensus 80 ----~~~d~vi~~a~~~~----~~~~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~v~~Ss~-~vyg~~~~~~~~e~~ 148 (335)
..+|++||+||... ...+.+.++..+++|+.++.++++++... .-++++.++|. +...
T Consensus 79 ~~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~~iii~s~~~~~~----------- 147 (259)
T d1ja9a_ 79 VSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAVMT----------- 147 (259)
T ss_dssp HHHHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGGTCC-----------
T ss_pred HHHcCCCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcCCccccccccccccc-----------
Confidence 48999999999743 22355677789999999999999997653 22356666553 3221
Q ss_pred CCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEeccccc
Q 019795 149 PYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPV 188 (335)
Q Consensus 149 ~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~ 188 (335)
+......|+.+|...+.+++.++.++ .++++.++.||.+-
T Consensus 148 ~~~~~~~Y~asK~al~~l~r~lA~e~~~~gIrvN~I~PG~i~ 189 (259)
T d1ja9a_ 148 GIPNHALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVK 189 (259)
T ss_dssp SCCSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBS
T ss_pred CCCCchhHHHHHHHHHHHHHHHHHHHhhcCeEEeccCcCCcc
Confidence 22234579999999999999888773 27999999999874
|
| >d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative carbonyl reductase sniffer species: Caenorhabditis elegans [TaxId: 6239]
Probab=99.79 E-value=1.6e-18 Score=147.50 Aligned_cols=174 Identities=13% Similarity=0.028 Sum_probs=126.5
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCC--eEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGF--KVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~ 79 (335)
|+.|+||||||+++||.+++++|+++|+ +|++.+|+.....+ +.+.. +.++.++.+|++|+++++++++.
T Consensus 1 M~~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~----l~~~~----~~~~~~~~~Dvs~~~~v~~~~~~ 72 (250)
T d1yo6a1 1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATE----LKSIK----DSRVHVLPLTVTCDKSLDTFVSK 72 (250)
T ss_dssp CCCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHH----HHTCC----CTTEEEEECCTTCHHHHHHHHHH
T ss_pred CcCCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHH----HHHhh----CCceEEEEEecCCHHHHHHHHHH
Confidence 5679999999999999999999999995 68888887655433 22222 26789999999999888877653
Q ss_pred -------CCCCEEEEcccccch-----hhhhcChHHHHHHhHHHHHHHHHHHHH----c-----------CCCEEEEecc
Q 019795 80 -------QKFEAVIHFGALKAV-----AESVQHPFRYFDNNLIGTINLYQAMAK----Y-----------NCKKLVFSSS 132 (335)
Q Consensus 80 -------~~~d~vi~~a~~~~~-----~~~~~~~~~~~~~nv~~~~~l~~~~~~----~-----------~~~~~v~~Ss 132 (335)
..+|++|||||.... ..+.+++++.+++|+.|+.++++++.. . ...+++.+|+
T Consensus 73 i~~~~~~~~idilinnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~s~ 152 (250)
T d1yo6a1 73 VGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISS 152 (250)
T ss_dssp HHHHHGGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECC
T ss_pred HHHHhCCCCeEEEEEcCcccCCCCccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccceecccccccc
Confidence 249999999997432 123445678999999999999988532 1 1236777777
Q ss_pred ccccCCCCCCCccCCCCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccc
Q 019795 133 ATIYGQPEKIPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNP 187 (335)
Q Consensus 133 ~~vyg~~~~~~~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v 187 (335)
...+-.... ...+..+...|+.||++...+++.++.+. .++.+.++.||.|
T Consensus 153 ~~~~~~~~~----~~~~~~~~~aY~aSKaal~~l~~~la~el~~~gI~v~~i~PG~v 205 (250)
T d1yo6a1 153 GLGSITDNT----SGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWV 205 (250)
T ss_dssp GGGCSTTCC----STTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC
T ss_pred ccccccCCc----ccccchhHHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCC
Confidence 544311110 01123344569999999999999988774 2789999999877
|
| >d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermotoga maritima [TaxId: 2336]
Probab=99.79 E-value=1.1e-18 Score=146.75 Aligned_cols=162 Identities=15% Similarity=0.110 Sum_probs=124.0
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc-C
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-Q 80 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-~ 80 (335)
+++|++|||||++.||+++++.|+++|++|++++|++. .+.+ ....++.+|+++. ++.++++ .
T Consensus 2 LkgK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~~-------~l~~-------~~~~~~~~Dv~~~--~~~~~~~~g 65 (234)
T d1o5ia_ 2 IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEE-------LLKR-------SGHRYVVCDLRKD--LDLLFEKVK 65 (234)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHH-------HHHH-------TCSEEEECCTTTC--HHHHHHHSC
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHH-------HHHh-------cCCcEEEcchHHH--HHHHHHHhC
Confidence 58999999999999999999999999999999998632 1222 2346788999864 3444443 3
Q ss_pred CCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHHH----HcCCCEEEEeccccccCCCCCCCccCCCCCCC
Q 019795 81 KFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAMA----KYNCKKLVFSSSATIYGQPEKIPCVEDFPYGA 152 (335)
Q Consensus 81 ~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~ 152 (335)
++|++||+||.... ..+.++++..+++|+.++..+++++. +.+..++|++||..... +...
T Consensus 66 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~G~ii~i~S~~~~~-----------~~~~ 134 (234)
T d1o5ia_ 66 EVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVIS-----------PIEN 134 (234)
T ss_dssp CCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS-----------CCTT
T ss_pred CCcEEEecccccCCcchhhhhhHHHHHHhhhhhhhhhhhhhcccccccccccccccccccccccc-----------cccc
Confidence 89999999986432 23456778899999999999988753 44556899999866542 3334
Q ss_pred CChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 153 MNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 153 ~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
...|+.+|...+.+++.++.++ .++++.++.|+.+-.+
T Consensus 135 ~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~ 174 (234)
T d1o5ia_ 135 LYTSNSARMALTGFLKTLSFEVAPYGITVNCVAPGWTETE 174 (234)
T ss_dssp BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCT
T ss_pred cccchhHHHHHHHHHHHHHHHhcccCeEEeecccCccchh
Confidence 4579999999999999888774 2789999999877544
|
| >d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dehydrogenase/reductase SDR family member 6, DHRS6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.79 E-value=9.7e-19 Score=148.12 Aligned_cols=169 Identities=15% Similarity=0.071 Sum_probs=131.6
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc-C
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-Q 80 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-~ 80 (335)
+++|++|||||++.||+++++.|+++|++|++++|++.+.. .+.+. ..+....+|+.+++.++...+. .
T Consensus 4 l~gK~alITGas~GIG~aia~~la~~G~~Vi~~~r~~~~l~----~~~~~------~~~~~~~~d~~~~~~~~~~~~~~~ 73 (245)
T d2ag5a1 4 LDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQ----ELEKY------PGIQTRVLDVTKKKQIDQFANEVE 73 (245)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHG----GGGGS------TTEEEEECCTTCHHHHHHHHHHCS
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHH----HHHhc------cCCceeeeeccccccccccccccc
Confidence 67899999999999999999999999999999999643322 22221 4577888999988877777665 4
Q ss_pred CCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHHHH----cCCCEEEEeccccccCCCCCCCccCCCCCCC
Q 019795 81 KFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAMAK----YNCKKLVFSSSATIYGQPEKIPCVEDFPYGA 152 (335)
Q Consensus 81 ~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~ 152 (335)
++|++||+||.... ..+.++++..+++|+.++..+++++.. .+..++|++||...- ..+...
T Consensus 74 ~id~lVn~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~----------~~~~~~ 143 (245)
T d2ag5a1 74 RLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASS----------VKGVVN 143 (245)
T ss_dssp CCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTT----------TBCCTT
T ss_pred cceeEEecccccCCCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCCCceeeeeechhhc----------cCCccc
Confidence 89999999997532 235567889999999999999998643 345689999885421 013344
Q ss_pred CChhHHhHHHHHHHHHHHHhhCC--CCeEEEEecccccCC
Q 019795 153 MNPYGRTKQWCEEIAFDVQKADP--EWRIILLRYFNPVGA 190 (335)
Q Consensus 153 ~~~Y~~sK~~~E~~~~~~~~~~~--~~~~~~lR~~~v~G~ 190 (335)
...|+.+|...+.+++.++.++. ++++.++.|+.|-.+
T Consensus 144 ~~~Y~~sKaal~~l~r~lA~e~~~~gIrvN~I~PG~i~T~ 183 (245)
T d2ag5a1 144 RCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTP 183 (245)
T ss_dssp BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECH
T ss_pred hhHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeceeech
Confidence 56799999999999999888742 789999999887543
|
| >d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.78 E-value=3.1e-19 Score=154.09 Aligned_cols=181 Identities=16% Similarity=0.041 Sum_probs=132.8
Q ss_pred CCe-EEEEcCCChhhHHHHHHHHhC-CCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 4 EKN-ILVTGGAGFIGTHCALQLLQG-GFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 4 ~~~-vlItGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
+|+ +|||||+++||.++++.|+++ |++|++.+|+..+.++..+.+.+.. .++.++.+|++|.++++++++.
T Consensus 2 g~rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~~~-----~~~~~~~~Dvs~~~sv~~~~~~~~ 76 (275)
T d1wmaa1 2 GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEG-----LSPRFHQLDIDDLQSIRALRDFLR 76 (275)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTT-----CCCEEEECCTTCHHHHHHHHHHHH
T ss_pred CCeEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcC-----CcEEEEEEecCCHHHHHHHHHHHH
Confidence 445 599999999999999999986 8999999998877777777766532 5688999999999998887765
Q ss_pred ---CCCCEEEEcccccchhh----hhcChHHHHHHhHHHHHHHHHHHHHc--CCCEEEEecccccc-CCCCCCC------
Q 019795 80 ---QKFEAVIHFGALKAVAE----SVQHPFRYFDNNLIGTINLYQAMAKY--NCKKLVFSSSATIY-GQPEKIP------ 143 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~v~~Ss~~vy-g~~~~~~------ 143 (335)
.++|++|||||...... ..++++.++++|+.|+..+++++... .-.++|++||.... +.....+
T Consensus 77 ~~~g~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~g~ivnisS~~~~~~~~~~~~y~~~k~ 156 (275)
T d1wmaa1 77 KEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKF 156 (275)
T ss_dssp HHHSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHHHHTSCHHHHHHH
T ss_pred HhcCCcEEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccceeccccccchhhhhhh
Confidence 48999999999743222 33456678999999999999998653 22589999995432 1110000
Q ss_pred -----------------------ccCCCCCCCCChhHHhHHHHHHHHHHHHhhC------CCCeEEEEecccccC
Q 019795 144 -----------------------CVEDFPYGAMNPYGRTKQWCEEIAFDVQKAD------PEWRIILLRYFNPVG 189 (335)
Q Consensus 144 -----------------------~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~------~~~~~~~lR~~~v~G 189 (335)
.....+..+...|+.||.....+.+.++.+. .++.+.++.||.|--
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~sK~a~~~~t~~la~~l~~~~~~~~I~vn~v~PG~v~T 231 (275)
T d1wmaa1 157 RSETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRT 231 (275)
T ss_dssp HCSSCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCS
T ss_pred cccccchhhhccccccchhcccccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecccccC
Confidence 0001123345679999999888776655431 378999999998743
|
| >d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Halohydrin dehalogenase HheC species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.77 E-value=8.2e-19 Score=149.31 Aligned_cols=163 Identities=16% Similarity=0.164 Sum_probs=124.7
Q ss_pred eEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc-----C
Q 019795 6 NILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-----Q 80 (335)
Q Consensus 6 ~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-----~ 80 (335)
++|||||+++||+++++.|+++|++|++.+|+....++... .. ..+..+|+++++++++++++ +
T Consensus 2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~~~~-~~----------~~~~~~dv~~~~~~~~~~~~~~~~~G 70 (252)
T d1zmta1 2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEA-FA----------ETYPQLKPMSEQEPAELIEAVTSAYG 70 (252)
T ss_dssp EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHH-HH----------HHCTTSEECCCCSHHHHHHHHHHHHS
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHh-hh----------CcEEEeccCCHHHHHHHHHHHHHHcC
Confidence 79999999999999999999999999999987665443322 11 12345788887777776654 4
Q ss_pred CCCEEEEcccccc-----hhhhhcChHHHHHHhHHHHHHHHHHH----HHcCCCEEEEeccccccCCCCCCCccCCCCCC
Q 019795 81 KFEAVIHFGALKA-----VAESVQHPFRYFDNNLIGTINLYQAM----AKYNCKKLVFSSSATIYGQPEKIPCVEDFPYG 151 (335)
Q Consensus 81 ~~d~vi~~a~~~~-----~~~~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~ 151 (335)
++|++||||+... ...+.++++..+++|+.++.++++++ ++.+-.+||++||...+. +..
T Consensus 71 ~iDiLVnNAg~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~IV~isS~~~~~-----------~~~ 139 (252)
T d1zmta1 71 QVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFG-----------PWK 139 (252)
T ss_dssp CCCEEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTS-----------CCT
T ss_pred CCCEEEECCcCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccccceeeccccccccc-----------ccc
Confidence 8999999998632 12245677889999999999998875 344557999999976542 223
Q ss_pred CCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 152 AMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 152 ~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
....|+.+|...+.+.+.++.++ .++++.++.|+.|-.+
T Consensus 140 ~~~~Y~asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~ 180 (252)
T d1zmta1 140 ELSTYTSARAGACTLANALSKELGEYNIPVFAIGPNYLHSE 180 (252)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCB
T ss_pred cccccccccccHHHHHHHHHHHhcccCcEEEEEecCCCcCc
Confidence 34579999999999999988774 2799999999988654
|
| >d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR) species: Human (Homo sapiens), [TaxId: 9606]
Probab=99.76 E-value=4.8e-18 Score=148.03 Aligned_cols=174 Identities=16% Similarity=0.081 Sum_probs=132.1
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
+++|++|||||+|+||+++++.|+++|++|++++|+..+..+..+++....+ ..+..+.+|+++++++.++++.
T Consensus 23 l~gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~~g----~~~~~~~~D~~~~~~v~~~~~~~~ 98 (294)
T d1w6ua_ 23 FQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTG----NKVHAIQCDVRDPDMVQNTVSELI 98 (294)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHS----SCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHhcC----CceEEEEecccChHHHHHHhhhhh
Confidence 4569999999999999999999999999999999987776666666655433 6788999999999998877664
Q ss_pred ---CCCCEEEEcccccch----hhhhcChHHHHHHhHHHHHHHHHHHH----Hc-CCCEEEEeccccccCCCCCCCccCC
Q 019795 80 ---QKFEAVIHFGALKAV----AESVQHPFRYFDNNLIGTINLYQAMA----KY-NCKKLVFSSSATIYGQPEKIPCVED 147 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~----~~-~~~~~v~~Ss~~vyg~~~~~~~~e~ 147 (335)
.++|++||+|+.... .....++...+.+|+.+...+...+. .. ....++.+||.....
T Consensus 99 ~~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~~ss~~~~~---------- 168 (294)
T d1w6ua_ 99 KVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAET---------- 168 (294)
T ss_dssp HHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHH----------
T ss_pred hhccccchhhhhhhhccccccccchhhhhhhheeeecccchhhhhhhhcccccccccccccccccchhhh----------
Confidence 589999999997432 22334566778889888877776532 22 334566666654321
Q ss_pred CCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 148 FPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 148 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
+......|+.+|...+.+++.++.++ .++++.++.||.|-.+
T Consensus 169 -~~~~~~~YsasKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~ 212 (294)
T d1w6ua_ 169 -GSGFVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTK 212 (294)
T ss_dssp -CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-
T ss_pred -cccccchHHHHHHHHHHHHHHHHHHHhHhCeEEEEEccCccccc
Confidence 22234579999999999999888774 2789999999988665
|
| >d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.76 E-value=4.8e-18 Score=143.16 Aligned_cols=161 Identities=15% Similarity=0.138 Sum_probs=119.9
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHH-------
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDK------- 75 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~------- 75 (335)
++|+||||||+|+||+++++.|+++|++|.++++.+.... .....+..|..+.++.+.
T Consensus 1 egK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~ 65 (236)
T d1dhra_ 1 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA---------------SASVIVKMTDSFTEQADQVTAEVGK 65 (236)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS---------------SEEEECCCCSCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccc---------------cccceeecccCcHHHHHHHHHHHHH
Confidence 4799999999999999999999999999999988655321 223345556655544433
Q ss_pred HHhcCCCCEEEEcccccc-----hhhhhcChHHHHHHhHHHHHHHHHHHHHc--CCCEEEEeccccccCCCCCCCccCCC
Q 019795 76 LFSSQKFEAVIHFGALKA-----VAESVQHPFRYFDNNLIGTINLYQAMAKY--NCKKLVFSSSATIYGQPEKIPCVEDF 148 (335)
Q Consensus 76 ~~~~~~~d~vi~~a~~~~-----~~~~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~ 148 (335)
.+...++|++||+||... ...+.+.++..+++|+.++.++++++... +-.++|++||.+...
T Consensus 66 ~~~~~~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~----------- 134 (236)
T d1dhra_ 66 LLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALD----------- 134 (236)
T ss_dssp HHTTCCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGS-----------
T ss_pred HhCCCCceEEEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccccceeEEccHHHcC-----------
Confidence 233346999999998421 12234567788999999999999987653 235899999976541
Q ss_pred CCCCCChhHHhHHHHHHHHHHHHhhC----CCCeEEEEecccccC
Q 019795 149 PYGAMNPYGRTKQWCEEIAFDVQKAD----PEWRIILLRYFNPVG 189 (335)
Q Consensus 149 ~~~~~~~Y~~sK~~~E~~~~~~~~~~----~~~~~~~lR~~~v~G 189 (335)
+......|+.||...+.+++.++.+. .++++.++.|+.+.-
T Consensus 135 ~~~~~~~Y~asKaal~~lt~~la~El~~~~~gI~vn~v~PG~v~T 179 (236)
T d1dhra_ 135 GTPGMIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDT 179 (236)
T ss_dssp CCTTBHHHHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEEC
T ss_pred CccCCcccHHHHHHHHHHHHHHHHHhccCCCcEEEEEEEeccCcC
Confidence 23334589999999999999998774 378999999987744
|
| >d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=99.75 E-value=1e-17 Score=141.00 Aligned_cols=158 Identities=15% Similarity=0.166 Sum_probs=116.5
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHH-------HH
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLD-------KL 76 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~-------~~ 76 (335)
..+||||||++.||++++++|+++|++|++++|++.... .....+.+|..+.++.. ..
T Consensus 2 ~gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~ 66 (235)
T d1ooea_ 2 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA---------------DSNILVDGNKNWTEQEQSILEQTASS 66 (235)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS---------------SEEEECCTTSCHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCchhcc---------------cccceeccccCchhHHHHHHHHHHHH
Confidence 467999999999999999999999999999999765321 22344556666544333 22
Q ss_pred HhcCCCCEEEEcccccc-----hhhhhcChHHHHHHhHHHHHHHHHHHHHc--CCCEEEEeccccccCCCCCCCccCCCC
Q 019795 77 FSSQKFEAVIHFGALKA-----VAESVQHPFRYFDNNLIGTINLYQAMAKY--NCKKLVFSSSATIYGQPEKIPCVEDFP 149 (335)
Q Consensus 77 ~~~~~~d~vi~~a~~~~-----~~~~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~v~~Ss~~vyg~~~~~~~~e~~~ 149 (335)
++..++|++|||||... .....+.++..+++|+.++..+++++... +-.++|++||..... +
T Consensus 67 ~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~Iv~isS~~~~~-----------~ 135 (235)
T d1ooea_ 67 LQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMG-----------P 135 (235)
T ss_dssp HTTCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGS-----------C
T ss_pred hcCCCeeEEEECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccceEEEEeccHHhcC-----------C
Confidence 23357999999998521 11223456678999999999999987654 225899999976542 3
Q ss_pred CCCCChhHHhHHHHHHHHHHHHhhCC----CCeEEEEecccc
Q 019795 150 YGAMNPYGRTKQWCEEIAFDVQKADP----EWRIILLRYFNP 187 (335)
Q Consensus 150 ~~~~~~Y~~sK~~~E~~~~~~~~~~~----~~~~~~lR~~~v 187 (335)
......|+.+|.+.+.+++.++.++. ++++..+.|+.+
T Consensus 136 ~~~~~~Y~asKaal~~l~~~la~e~~~~~~~i~v~~i~Pg~~ 177 (235)
T d1ooea_ 136 TPSMIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTL 177 (235)
T ss_dssp CTTBHHHHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCB
T ss_pred cccccchHHHHHHHHHHHHHHHHHhccCCCceEEEEEecCcC
Confidence 33446899999999999999987752 567888888766
|
| >d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.75 E-value=2.5e-17 Score=139.86 Aligned_cols=170 Identities=15% Similarity=0.205 Sum_probs=131.1
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc--
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS-- 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~-- 79 (335)
+++|++|||||+++||++++++|+++|++|++++|+....+...+++. ........|+.+.+++++....
T Consensus 3 lkGKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~--------~~~~~~~~~~~~~~~~~~~~~~~~ 74 (248)
T d2o23a1 3 VKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLG--------NNCVFAPADVTSEKDVQTALALAK 74 (248)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHC--------TTEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhC--------CCcccccccccccccccccccccc
Confidence 689999999999999999999999999999999998877666555443 4667888899987766655443
Q ss_pred ---CCCCEEEEcccccc----------hhhhhcChHHHHHHhHHHHHHHHHHHHHc----------CCCEEEEecccccc
Q 019795 80 ---QKFEAVIHFGALKA----------VAESVQHPFRYFDNNLIGTINLYQAMAKY----------NCKKLVFSSSATIY 136 (335)
Q Consensus 80 ---~~~d~vi~~a~~~~----------~~~~~~~~~~~~~~nv~~~~~l~~~~~~~----------~~~~~v~~Ss~~vy 136 (335)
...|.++++++... ...+.+.++.++++|+.++.++.+++... +-.+||++||...+
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~ 154 (248)
T d2o23a1 75 GKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAF 154 (248)
T ss_dssp HHHSCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHH
T ss_pred cccccccccccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecchhhc
Confidence 36888888765421 11123567789999999999999987542 22479999997754
Q ss_pred CCCCCCCccCCCCCCCCChhHHhHHHHHHHHHHHHhhCC--CCeEEEEecccccCC
Q 019795 137 GQPEKIPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKADP--EWRIILLRYFNPVGA 190 (335)
Q Consensus 137 g~~~~~~~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~--~~~~~~lR~~~v~G~ 190 (335)
- +......|+.+|...+.+++.++.++. ++++.++.||.+..+
T Consensus 155 ~-----------~~~~~~~Y~asKaal~~lt~~la~e~~~~gIrvN~I~PG~i~T~ 199 (248)
T d2o23a1 155 E-----------GQVGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTP 199 (248)
T ss_dssp H-----------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC
T ss_pred c-----------CCCCchHHHHHHHHHHHHHHHHHHHhcccCcceeeeccCceecc
Confidence 1 333446799999999999999887742 789999999887544
|
| >d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Escherichia coli [TaxId: 562]
Probab=99.72 E-value=3.5e-16 Score=133.43 Aligned_cols=173 Identities=16% Similarity=0.047 Sum_probs=127.5
Q ss_pred CCCCCeEEEEcCCC--hhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHh
Q 019795 1 MASEKNILVTGGAG--FIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFS 78 (335)
Q Consensus 1 ~~~~~~vlItGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~ 78 (335)
|+++|+||||||+| +||+++++.|+++|++|++.+|++..... ..++.... .....+..|+.+..++...+.
T Consensus 2 ~L~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~~-~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 75 (258)
T d1qsga_ 2 FLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGR-VEEFAAQL-----GSDIVLQCDVAEDASIDTMFA 75 (258)
T ss_dssp TTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHH-HHHHHHHT-----TCCCEEECCTTCHHHHHHHHH
T ss_pred cCCCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHHH-HHHHHhhc-----CCcceeecccchHHHHHHHHH
Confidence 68999999999998 89999999999999999999997543333 23332221 456778889998877766655
Q ss_pred c-----CCCCEEEEcccccchhh---------hhcChHHHHHHhHHHHHHHHHHHHHc--CCCEEEEeccccccCCCCCC
Q 019795 79 S-----QKFEAVIHFGALKAVAE---------SVQHPFRYFDNNLIGTINLYQAMAKY--NCKKLVFSSSATIYGQPEKI 142 (335)
Q Consensus 79 ~-----~~~d~vi~~a~~~~~~~---------~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~v~~Ss~~vyg~~~~~ 142 (335)
. ..+|++||+|+...... ..+.+...+.+|+.+...+++++... +-+.+|++||....
T Consensus 76 ~~~~~~~~~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ii~iss~~~~------ 149 (258)
T d1qsga_ 76 ELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAE------ 149 (258)
T ss_dssp HHHTTCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGT------
T ss_pred HhhhcccccceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccCCcEEEEecchhhc------
Confidence 3 47899999988642221 12334467778888888888887654 22468888886542
Q ss_pred CccCCCCCCCCChhHHhHHHHHHHHHHHHhhCC--CCeEEEEecccccCC
Q 019795 143 PCVEDFPYGAMNPYGRTKQWCEEIAFDVQKADP--EWRIILLRYFNPVGA 190 (335)
Q Consensus 143 ~~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~--~~~~~~lR~~~v~G~ 190 (335)
.+.+....|+.+|...+.+++.++.++. ++++.+++|+.|..+
T Consensus 150 -----~~~~~~~~Y~~sKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~ 194 (258)
T d1qsga_ 150 -----RAIPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTL 194 (258)
T ss_dssp -----SBCTTTTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCT
T ss_pred -----cCCCCcHHHHHHHHHHHHHHHHHHHHhCccCceeecccccccccc
Confidence 1233346799999999999999888742 689999999988655
|
| >d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Leishmania major [TaxId: 5664]
Probab=99.65 E-value=4.5e-15 Score=128.21 Aligned_cols=172 Identities=14% Similarity=0.029 Sum_probs=116.3
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCC-chhhHHhhhhhcCC-------------ccccceeEEEccCCC
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNS-VPEAVDRVKDLAGP-------------ELAKKLEFHVGDLRN 69 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~~~~~~~~~~~~-------------~~~~~i~~~~~Dl~d 69 (335)
+.++|||||+++||+++++.|+++|++|++.+++... .....+.+....+. ..+.......+|+++
T Consensus 2 ~pVAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~dv~~ 81 (284)
T d1e7wa_ 2 VPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTL 81 (284)
T ss_dssp CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBCH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHhhcCCceEEEEeecccccccccccccccccCCC
Confidence 5689999999999999999999999999998775433 23333344332220 001123344567888
Q ss_pred HHHHHHHHhc-----CCCCEEEEcccccchhh----hhc--------------ChHHHHHHhHHHHHHHHHHHHHc----
Q 019795 70 KDDLDKLFSS-----QKFEAVIHFGALKAVAE----SVQ--------------HPFRYFDNNLIGTINLYQAMAKY---- 122 (335)
Q Consensus 70 ~~~~~~~~~~-----~~~d~vi~~a~~~~~~~----~~~--------------~~~~~~~~nv~~~~~l~~~~~~~---- 122 (335)
+++++++++. +++|++||+||...... +.+ ....++.+|+.++..+.+++...
T Consensus 82 ~~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 161 (284)
T d1e7wa_ 82 FTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGT 161 (284)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHHhCCCCEEEecCCccCCCchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeeccccchhhhh
Confidence 8888887764 58999999999743211 111 12246889999999998875431
Q ss_pred ------CCCEEEEeccccccCCCCCCCccCCCCCCCCChhHHhHHHHHHHHHHHHhhCC--CCeEEEEeccc
Q 019795 123 ------NCKKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKADP--EWRIILLRYFN 186 (335)
Q Consensus 123 ------~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~--~~~~~~lR~~~ 186 (335)
+...+|+++|.... .+......|+.+|...+.+++.++.++. ++++.++.|+.
T Consensus 162 ~~~~~~~~~~ii~~~s~~~~-----------~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~ 222 (284)
T d1e7wa_ 162 PAKHRGTNYSIINMVDAMTN-----------QPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGL 222 (284)
T ss_dssp CGGGSCSCEEEEEECCTTTT-----------SCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESS
T ss_pred HHHhcCCCCccccccccccc-----------CCccceeeeccccccchhhhHHHHHHhCCcccccccccccc
Confidence 22367777775432 1333456899999999999999887742 78899999975
|
| >d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Helicobacter pylori [TaxId: 210]
Probab=99.64 E-value=6.6e-15 Score=126.52 Aligned_cols=173 Identities=13% Similarity=0.052 Sum_probs=118.0
Q ss_pred CCCCCeEEEEcCCC--hhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHh
Q 019795 1 MASEKNILVTGGAG--FIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFS 78 (335)
Q Consensus 1 ~~~~~~vlItGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~ 78 (335)
||++|++|||||+| +||.+++++|+++|++|++++|++. .....+++.... ....+..+|+++++++.++++
T Consensus 2 ~L~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~-~~~~~~~l~~~~-----~~~~~~~~d~~~~~~~~~~~~ 75 (274)
T d2pd4a1 2 FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-LEKRVRPIAQEL-----NSPYVYELDVSKEEHFKSLYN 75 (274)
T ss_dssp TTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT-THHHHHHHHHHT-----TCCCEEECCTTCHHHHHHHHH
T ss_pred cCCCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHHHhhC-----CceeEeeecccchhhHHHHHH
Confidence 78999999999887 8999999999999999999999743 334444444332 456788999999988887775
Q ss_pred c-----CCCCEEEEcccccchhhh-----hcChHHH---HHHhHHHHHHHHHHHHHc-CC-CEEEEeccccccCCCCCCC
Q 019795 79 S-----QKFEAVIHFGALKAVAES-----VQHPFRY---FDNNLIGTINLYQAMAKY-NC-KKLVFSSSATIYGQPEKIP 143 (335)
Q Consensus 79 ~-----~~~d~vi~~a~~~~~~~~-----~~~~~~~---~~~nv~~~~~l~~~~~~~-~~-~~~v~~Ss~~vyg~~~~~~ 143 (335)
. ..+|++||+++....... ....... ..++..+...+...+.+. +. ..++..|+.+..+
T Consensus 76 ~~~~~~g~id~lV~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~------ 149 (274)
T d2pd4a1 76 SVKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTK------ 149 (274)
T ss_dssp HHHHHTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTS------
T ss_pred HHHHHcCCCCeEEeecccccccccccccccccchhhhhhhccccccccccccccccccccCcceeeeccccccc------
Confidence 4 489999999997433221 1122222 222222333444444333 22 2455555555432
Q ss_pred ccCCCCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 144 CVEDFPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 144 ~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
+......|+.+|...+.+++..+.++ .++++.++.|+.+.-+
T Consensus 150 -----~~~~~~~y~asK~al~~ltr~lA~e~~~~GIrvN~I~PG~v~T~ 193 (274)
T d2pd4a1 150 -----YMAHYNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTL 193 (274)
T ss_dssp -----BCTTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCT
T ss_pred -----ccccchhhhHHHHHHHHHHHhhHHHhcCcCceecccccCcccCc
Confidence 23344579999999999998877663 2789999999887654
|
| >d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]
Probab=99.60 E-value=9.9e-15 Score=124.92 Aligned_cols=171 Identities=17% Similarity=0.059 Sum_probs=119.0
Q ss_pred CCCCCeEEEEcCC--ChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHh
Q 019795 1 MASEKNILVTGGA--GFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFS 78 (335)
Q Consensus 1 ~~~~~~vlItGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~ 78 (335)
||++|++|||||+ .+||+++++.|+++|++|++++|++.+ ..+++.+..+ .+...+.+|+++++++.++++
T Consensus 3 ~l~gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~---~~~~~~~~~~----~~~~~~~~dv~~~~~~~~~~~ 75 (268)
T d2h7ma1 3 LLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLR---LIQRITDRLP----AKAPLLELDVQNEEHLASLAG 75 (268)
T ss_dssp TTTTCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHH---HHHHHHTTSS----SCCCEEECCTTCHHHHHHHHH
T ss_pred CCCCCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHH---HHHHHHHHcC----CceeeEeeecccccccccccc
Confidence 7899999999965 479999999999999999999886543 2333333332 667889999999877666544
Q ss_pred c--------CCCCEEEEcccccchh---------hhhcChHHHHHHhHHHHHHHHHHHHHcC-CCEEEEeccccccCCCC
Q 019795 79 S--------QKFEAVIHFGALKAVA---------ESVQHPFRYFDNNLIGTINLYQAMAKYN-CKKLVFSSSATIYGQPE 140 (335)
Q Consensus 79 ~--------~~~d~vi~~a~~~~~~---------~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~v~~Ss~~vyg~~~ 140 (335)
. ..+|+++|+|+..... .+.+.+...+..|+.......+.+.... ....+.++|....
T Consensus 76 ~v~~~~~~~~~ld~~i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~---- 151 (268)
T d2h7ma1 76 RVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPS---- 151 (268)
T ss_dssp HHHHHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCS----
T ss_pred hhhhccccCCCcceeeecccccCccccccccccccchhhhhhhhhhhhhHHHHHHHHHhhhccccccccccccccc----
Confidence 3 3589999999864211 1223444567777777777777665542 2234444443322
Q ss_pred CCCccCCCCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccC
Q 019795 141 KIPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVG 189 (335)
Q Consensus 141 ~~~~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G 189 (335)
.+.+....|+.+|...+.+++.++.++ .++++.++.|+.+-.
T Consensus 152 -------~~~p~~~~y~~sK~a~~~ltr~lA~e~~~~gIrVN~V~PG~v~T 195 (268)
T d2h7ma1 152 -------RAMPAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRT 195 (268)
T ss_dssp -------SCCTTTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCC
T ss_pred -------ccCcccchhhccccchhhccccchhhhhccCCcceEEecCCCCC
Confidence 122234579999999999999888763 278999999987743
|
| >d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=99.59 E-value=1.3e-14 Score=122.13 Aligned_cols=159 Identities=21% Similarity=0.260 Sum_probs=117.8
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc----
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS---- 79 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~---- 79 (335)
.|++|||||+++||+++++.|+++|++|++++|++.. .+.....+|+.+......+...
T Consensus 1 DK~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~-----------------~~~~~~~~d~~~~~~~~~~~~~~~~~ 63 (241)
T d1uaya_ 1 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRREG-----------------EDLIYVEGDVTREEDVRRAVARAQEE 63 (241)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCCS-----------------SSSEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCccc-----------------ccceEeeccccchhhhHHHHHhhhcc
Confidence 4899999999999999999999999999999997543 3456788999988766665543
Q ss_pred CCCCEEEEcccccch--------hhhhcChHHHHHHhHHHHHHHHHHHHHc----------CCCEEEEeccccccCCCCC
Q 019795 80 QKFEAVIHFGALKAV--------AESVQHPFRYFDNNLIGTINLYQAMAKY----------NCKKLVFSSSATIYGQPEK 141 (335)
Q Consensus 80 ~~~d~vi~~a~~~~~--------~~~~~~~~~~~~~nv~~~~~l~~~~~~~----------~~~~~v~~Ss~~vyg~~~~ 141 (335)
...+.++++++.... ....+.++..+++|+.++..+++.+... +-.++|++||...+-
T Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~---- 139 (241)
T d1uaya_ 64 APLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFE---- 139 (241)
T ss_dssp SCEEEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHH----
T ss_pred ccccchhhhhhccccccccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCceeeeeecchhhcc----
Confidence 345555555543211 1123455678999999999888875432 235899999976541
Q ss_pred CCccCCCCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 142 IPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 142 ~~~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
+......|+.+|...+.+++.++.++ .++++.++.|+.+-.+
T Consensus 140 -------~~~~~~~Y~asKaal~~lt~~lA~ela~~gIrVN~V~PG~i~T~ 183 (241)
T d1uaya_ 140 -------GQIGQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTP 183 (241)
T ss_dssp -------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSH
T ss_pred -------CCCCchhhHHHHHHHHHHHHHHHHHHhhcCCceeeecCCccccc
Confidence 23345689999999999999988773 2789999999887543
|
| >d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Trypanosoma cruzi [TaxId: 5693]
Probab=99.52 E-value=3.7e-13 Score=114.77 Aligned_cols=171 Identities=17% Similarity=0.159 Sum_probs=114.4
Q ss_pred CeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCc-hhhHHhhhhhcCCccccceeEEEccCCC----HHHHHHHHhc
Q 019795 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSV-PEAVDRVKDLAGPELAKKLEFHVGDLRN----KDDLDKLFSS 79 (335)
Q Consensus 5 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~i~~~~~Dl~d----~~~~~~~~~~ 79 (335)
.++|||||+++||+++++.|+++|++|++++|+..+. +...+++....+ ........|+.+ ++.+.++++.
T Consensus 2 ~vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (266)
T d1mxha_ 2 PAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARA----GSAVLCKGDLSLSSSLLDCCEDIIDC 77 (266)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHST----TCEEEEECCCSSSTTHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHHHhhcC----CceEEEecccccchhHHHHHHHHHHH
Confidence 4789999999999999999999999999999875543 333444444333 556666666643 3444444432
Q ss_pred -----CCCCEEEEcccccchhh---------------hhcChHHHHHHhHHHHHHHHHHHHHc---------CCCEEEEe
Q 019795 80 -----QKFEAVIHFGALKAVAE---------------SVQHPFRYFDNNLIGTINLYQAMAKY---------NCKKLVFS 130 (335)
Q Consensus 80 -----~~~d~vi~~a~~~~~~~---------------~~~~~~~~~~~nv~~~~~l~~~~~~~---------~~~~~v~~ 130 (335)
+++|++||+||...... ....+...+..|+.+........... ....++.+
T Consensus 78 ~~~~~g~iDilvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (266)
T d1mxha_ 78 SFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNL 157 (266)
T ss_dssp HHHHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEE
T ss_pred HHHHhCCCCEEEECCccCCCCcccccccccchhcccccccccccccccccccccchhhhhccccccccccccccccchhh
Confidence 48999999999643211 11223356667777766666654432 12245566
Q ss_pred ccccccCCCCCCCccCCCCCCCCChhHHhHHHHHHHHHHHHhhCC--CCeEEEEecccccCC
Q 019795 131 SSATIYGQPEKIPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKADP--EWRIILLRYFNPVGA 190 (335)
Q Consensus 131 Ss~~vyg~~~~~~~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~--~~~~~~lR~~~v~G~ 190 (335)
|+.... .+......|+.||...+.+++.++.++. ++++..+.||.+.-+
T Consensus 158 ~~~~~~-----------~~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~t~ 208 (266)
T d1mxha_ 158 CDAMTD-----------LPLPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLP 208 (266)
T ss_dssp CCGGGG-----------SCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCC
T ss_pred hhcccc-----------ccCcchhhhhhhHHHHhhhHHHHHHHhCccCcEEEEeccCcEecc
Confidence 664433 1233456799999999999998887642 789999999887543
|
| >d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=99.51 E-value=2.4e-13 Score=117.91 Aligned_cols=179 Identities=9% Similarity=-0.087 Sum_probs=111.6
Q ss_pred CCCCeEEEEcCCC--hhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhc------CCcc---ccceeEEEccC---
Q 019795 2 ASEKNILVTGGAG--FIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLA------GPEL---AKKLEFHVGDL--- 67 (335)
Q Consensus 2 ~~~~~vlItGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~------~~~~---~~~i~~~~~Dl--- 67 (335)
|++|++|||||+| +||+++++.|+++|++|++.+|++.............. .... ...+..+..++
T Consensus 6 L~gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (297)
T d1d7oa_ 6 LRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVFDNP 85 (297)
T ss_dssp CTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTCCSG
T ss_pred CCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCchhhhhhHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhhcccc
Confidence 5679999999987 99999999999999999999885332111111100000 0000 01122222222
Q ss_pred ---------------CCHHHHHHHHhc-----CCCCEEEEcccccc------hhhhhcChHHHHHHhHHHHHHHHHHHHH
Q 019795 68 ---------------RNKDDLDKLFSS-----QKFEAVIHFGALKA------VAESVQHPFRYFDNNLIGTINLYQAMAK 121 (335)
Q Consensus 68 ---------------~d~~~~~~~~~~-----~~~d~vi~~a~~~~------~~~~~~~~~~~~~~nv~~~~~l~~~~~~ 121 (335)
.+...++++++. .++|++||+||... ...+.+++...+++|+.++..+++++..
T Consensus 86 ~~~~~dv~~~~~~~~~~~~~~~~~~~~~~~~~G~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~ 165 (297)
T d1d7oa_ 86 EDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLP 165 (297)
T ss_dssp GGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGG
T ss_pred ccchhhhhhhhhhhhccHHHHHHHHHHHHHHhCCCcccccccccccccccchhhhhcccccccccchhhhhhhhhhHHHH
Confidence 121222222221 48999999998632 2234556778999999999999998765
Q ss_pred cC--CCEEEEeccccccCCCCCCCccCCCCCCCCChhHHhHHHHHHHHHHHHhhC---CCCeEEEEecccccCC
Q 019795 122 YN--CKKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKAD---PEWRIILLRYFNPVGA 190 (335)
Q Consensus 122 ~~--~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~~lR~~~v~G~ 190 (335)
.. -+.++.+++.+.... .......|..+|...+.+++..+.++ .++++.++.|+.+..+
T Consensus 166 ~~~~~g~~~~~~~~~~~~~----------~~~~~~~y~~aKaa~~~l~~~~a~e~~~~~gIrvN~I~PG~i~T~ 229 (297)
T d1d7oa_ 166 IMNPGGASISLTYIASERI----------IPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSR 229 (297)
T ss_dssp GEEEEEEEEEEECGGGTSC----------CTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCC
T ss_pred HhhcCCcceeeeehhhccc----------ccccccceecccccccccccccchhccccceEEecccccccccch
Confidence 42 134555555443211 22334579999999888887665543 1799999999988665
|
| >d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=99.50 E-value=6.5e-14 Score=123.28 Aligned_cols=176 Identities=10% Similarity=-0.048 Sum_probs=116.8
Q ss_pred CCeEEEEc--CCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcC-------CccccceeEEE----------
Q 019795 4 EKNILVTG--GAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAG-------PELAKKLEFHV---------- 64 (335)
Q Consensus 4 ~~~vlItG--atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-------~~~~~~i~~~~---------- 64 (335)
+|.+|||| ++.+||+++++.|+++|++|++.++................. ...........
T Consensus 2 ~kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (329)
T d1uh5a_ 2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAND 81 (329)
T ss_dssp CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHTTTTTGGGEETTTEECCEEEEEECCTTCSSGGG
T ss_pred CcEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCchhhhhhhHHHHHHhhhhHHHHHHHhhhhhhhcccccceehhhcc
Confidence 68999999 557999999999999999999987754322211111110000 00001112222
Q ss_pred ----------ccCCCHHHHHHHHhc-----CCCCEEEEcccccc------hhhhhcChHHHHHHhHHHHHHHHHHHHHc-
Q 019795 65 ----------GDLRNKDDLDKLFSS-----QKFEAVIHFGALKA------VAESVQHPFRYFDNNLIGTINLYQAMAKY- 122 (335)
Q Consensus 65 ----------~Dl~d~~~~~~~~~~-----~~~d~vi~~a~~~~------~~~~~~~~~~~~~~nv~~~~~l~~~~~~~- 122 (335)
+|+.+.++++++++. .++|++||+|+... ...+.++++..+++|+.++..+++++...
T Consensus 82 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~k~~~~~m 161 (329)
T d1uh5a_ 82 IDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIM 161 (329)
T ss_dssp CCHHHHTSHHHHTCCCCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGE
T ss_pred cchhhhhhhhhhhhhHHHHHHHHHHHHHHhCCCCeeccccccccccCCChhhhhhhhhhhhcccchhHHHHHHHHHHhhc
Confidence 255555555554442 48999999998632 22245677889999999999999998764
Q ss_pred -CCCEEEEeccccccCCCCCCCccCCCCCCCCChhHHhHHHHHHHHHHHHhhC-C--CCeEEEEecccccC
Q 019795 123 -NCKKLVFSSSATIYGQPEKIPCVEDFPYGAMNPYGRTKQWCEEIAFDVQKAD-P--EWRIILLRYFNPVG 189 (335)
Q Consensus 123 -~~~~~v~~Ss~~vyg~~~~~~~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-~--~~~~~~lR~~~v~G 189 (335)
.-+++|.+||.+.... .+.....|+.+|...+.+++.++.+. | ++++.++.||.|--
T Consensus 162 ~~~GsIv~iss~~~~~~----------~p~y~~~y~asKaal~~ltr~lA~Ela~~~gIRVNaI~PG~i~T 222 (329)
T d1uh5a_ 162 KPQSSIISLTYHASQKV----------VPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKS 222 (329)
T ss_dssp EEEEEEEEEECGGGTSC----------CTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCC
T ss_pred ccccccccceeehhccc----------ccccchhhhhhhccccccchhhHHHHhcccCcEEEEEecCcccc
Confidence 2258999988664311 11223469999999999999888664 2 89999999987643
|
| >d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylene-tetrahydromethanopterin dehydrogenase species: Methylobacterium extorquens [TaxId: 408]
Probab=99.45 E-value=2.5e-14 Score=115.97 Aligned_cols=106 Identities=18% Similarity=0.151 Sum_probs=82.2
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCC
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQK 81 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~ 81 (335)
+++|+|+||||+|+||+.+++.|+++|++|++++|+..+.....+.+... ..+....+|++|.+++.+++. +
T Consensus 21 l~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~------~~~~~~~~d~~~~~~~~~~~~--~ 92 (191)
T d1luaa1 21 VKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKR------FKVNVTAAETADDASRAEAVK--G 92 (191)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHH------HTCCCEEEECCSHHHHHHHTT--T
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHHHHhc------cchhhhhhhcccHHHHHHHhc--C
Confidence 57899999999999999999999999999999999877666665555443 356678899999999999998 8
Q ss_pred CCEEEEcccccchhhhhcChHHHHHHhHHHHHHH
Q 019795 82 FEAVIHFGALKAVAESVQHPFRYFDNNLIGTINL 115 (335)
Q Consensus 82 ~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l 115 (335)
+|+|||+|+......+.+.+...+.+|+.+..+.
T Consensus 93 iDilin~Ag~g~~~~~~e~~~~~~~~nv~~~~~~ 126 (191)
T d1luaa1 93 AHFVFTAGAIGLELLPQAAWQNESSIEIVADYNA 126 (191)
T ss_dssp CSEEEECCCTTCCCBCHHHHHTCTTCCEEEECCC
T ss_pred cCeeeecCccccccCCHHHHHhhhcceeehhHhh
Confidence 8999999987533333444444555555444433
|
| >d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha-hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=99.39 E-value=5.5e-12 Score=106.75 Aligned_cols=162 Identities=17% Similarity=0.091 Sum_probs=104.5
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHh----c
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFS----S 79 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~----~ 79 (335)
||+||||||+++||++++++|+++|++|++++|++.+ ...|+.++........ +
T Consensus 1 mkVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~~~----------------------~~~d~~~~~~~~~~~~~~~~~ 58 (257)
T d1fjha_ 1 MSIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAE----------------------VIADLSTAEGRKQAIADVLAK 58 (257)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSS----------------------EECCTTSHHHHHHHHHHHHTT
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECChHH----------------------HHHHhcCHHHHHHHHHHHHHH
Confidence 7899999999999999999999999999999986432 2346666554443322 1
Q ss_pred --CCCCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHH----cCCCEEEEeccccccCC-CCCCCcc-------
Q 019795 80 --QKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAK----YNCKKLVFSSSATIYGQ-PEKIPCV------- 145 (335)
Q Consensus 80 --~~~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~v~~Ss~~vyg~-~~~~~~~------- 145 (335)
..+|+++|+|+... ..........+|..+...+.+.... ........+++...... ....+..
T Consensus 59 ~~~~id~lv~~Ag~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 135 (257)
T d1fjha_ 59 CSKGMDGLVLCAGLGP---QTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGE 135 (257)
T ss_dssp CTTCCSEEEECCCCCT---TCSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTC
T ss_pred hCCCCcEEEEcCCCCC---cHHHHHHHHHHHHHHHHHHHHHhhhhhhhhccCcceeeeeccccchhhhhhhhhhhccCCc
Confidence 36899999998743 2344556778888888887776432 23334555544322100 0000000
Q ss_pred ---------CCCCCCCCChhHHhHHHHHHHHHHHHhhC--CCCeEEEEecccccCC
Q 019795 146 ---------EDFPYGAMNPYGRTKQWCEEIAFDVQKAD--PEWRIILLRYFNPVGA 190 (335)
Q Consensus 146 ---------e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~lR~~~v~G~ 190 (335)
......+...|+.+|...+.+++.++.++ .++++.++.|+.+-.+
T Consensus 136 ~~~i~s~~~~~~~~~~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~ 191 (257)
T d1fjha_ 136 EAKARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETP 191 (257)
T ss_dssp HHHHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC----
T ss_pred EEEEeeehhccCCCcchHHHHHHhhhhhccccccccccccccccccccccCCcCCh
Confidence 00011112359999999999999887663 2799999999887544
|
| >d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Lactobacillus pentosus [TaxId: 1589]
Probab=98.53 E-value=2.2e-07 Score=70.51 Aligned_cols=118 Identities=12% Similarity=0.200 Sum_probs=76.7
Q ss_pred CCCCCeEEEEcCCChhhHHHHHHHHhCC--CeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHh
Q 019795 1 MASEKNILVTGGAGFIGTHCALQLLQGG--FKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFS 78 (335)
Q Consensus 1 ~~~~~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~ 78 (335)
|.+.|||.|.|+ |.+|+.++..|+.+| .+++++++.+.........+.+..... ........|.. .+.
T Consensus 2 m~~~~KI~IIGa-G~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~a~~~~--~~~~~~~~d~~-------~~~ 71 (146)
T d1ez4a1 2 MPNHQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFT--APKKIYSGEYS-------DCK 71 (146)
T ss_dssp BTTBCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGS--CCCEEEECCGG-------GGT
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhcccccc--CCceEeeccHH-------Hhc
Confidence 777889999996 999999999999987 689999986544333333343322111 23344455532 133
Q ss_pred cCCCCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEecc
Q 019795 79 SQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSS 132 (335)
Q Consensus 79 ~~~~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss 132 (335)
..|+||.+|+..... .++-......|+.....+++.+.+.+.+.++.+-|
T Consensus 72 --~adivvitag~~~~~--g~~r~~l~~~N~~i~~~~~~~i~~~~p~aivivvt 121 (146)
T d1ez4a1 72 --DADLVVITAGAPQKP--GESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVAA 121 (146)
T ss_dssp --TCSEEEECCCC------------CHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred --cccEEEEecccccCC--CCCHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEeC
Confidence 789999999875432 33444778889999999999999887655554433
|
| >d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn Mja218 species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=98.37 E-value=1.7e-06 Score=64.45 Aligned_cols=72 Identities=21% Similarity=0.210 Sum_probs=55.9
Q ss_pred CeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCCCE
Q 019795 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKFEA 84 (335)
Q Consensus 5 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~d~ 84 (335)
|+|+|.|+ |.+|+.+++.|.+.|++|+++++++... .++... -++.++.+|.+|++.++++-- ...|.
T Consensus 1 M~IvI~G~-G~~G~~la~~L~~~g~~v~vid~d~~~~----~~~~~~------~~~~vi~Gd~~~~~~l~~~~i-~~a~~ 68 (132)
T d1lssa_ 1 MYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDIC----KKASAE------IDALVINGDCTKIKTLEDAGI-EDADM 68 (132)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHH----HHHHHH------CSSEEEESCTTSHHHHHHTTT-TTCSE
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCCCcceecCChhhh----hhhhhh------hhhhhccCcccchhhhhhcCh-hhhhh
Confidence 68999998 9999999999999999999998864432 333221 246789999999998888732 26788
Q ss_pred EEEc
Q 019795 85 VIHF 88 (335)
Q Consensus 85 vi~~ 88 (335)
++-+
T Consensus 69 vv~~ 72 (132)
T d1lssa_ 69 YIAV 72 (132)
T ss_dssp EEEC
T ss_pred hccc
Confidence 8864
|
| >d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=98.30 E-value=4.8e-06 Score=62.66 Aligned_cols=114 Identities=18% Similarity=0.180 Sum_probs=76.7
Q ss_pred eEEEEcCCChhhHHHHHHHHhCC--CeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCCC
Q 019795 6 NILVTGGAGFIGTHCALQLLQGG--FKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKFE 83 (335)
Q Consensus 6 ~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~d 83 (335)
||.|+||+|.+|++++..|..+| -++++++..+. ......+.+.. .......-+ ...+..+.++ +.|
T Consensus 2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~--~~~a~Dl~~~~------~~~~~~~~~-~~~~~~~~~~--~aD 70 (144)
T d1mlda1 2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHT--PGVAADLSHIE------TRATVKGYL-GPEQLPDCLK--GCD 70 (144)
T ss_dssp EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSH--HHHHHHHTTSS------SSCEEEEEE-SGGGHHHHHT--TCS
T ss_pred eEEEECCCChHHHHHHHHHHhCCccceEEEEecccc--chhhHHHhhhh------hhcCCCeEE-cCCChHHHhC--CCC
Confidence 78999999999999999999887 46888887532 22223333321 111122222 2344556666 789
Q ss_pred EEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEecc
Q 019795 84 AVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSS 132 (335)
Q Consensus 84 ~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss 132 (335)
+||.+||.+.. ..++-....+.|+.....+++.+.+.+.+.++.+-|
T Consensus 71 ivVitag~~~~--~g~sR~~ll~~N~~i~~~i~~~i~~~~p~~iiivvt 117 (144)
T d1mlda1 71 VVVIPAGVPRK--PGMTRDDLFNTNATIVATLTAACAQHCPDAMICIIS 117 (144)
T ss_dssp EEEECCSCCCC--TTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred EEEECCCcCCC--CCCCcchHHHHHHHHHHHHHHHHHhcCCCeEEEEec
Confidence 99999997532 233445788999999999999999987654444433
|
| >d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Saccharopine reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=98.25 E-value=1.3e-06 Score=68.42 Aligned_cols=75 Identities=23% Similarity=0.254 Sum_probs=56.5
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCC
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKF 82 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~ 82 (335)
+.|+|+|.|| |++|+++++.|.++|++|++++|+........+.+ +.......+..+.......+. ..
T Consensus 1 ~~K~IliiGa-G~~G~~~a~~L~~~g~~V~v~dr~~~~a~~l~~~~---------~~~~~~~~~~~~~~~~~~~i~--~~ 68 (182)
T d1e5qa1 1 ATKSVLMLGS-GFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGV---------QHSTPISLDVNDDAALDAEVA--KH 68 (182)
T ss_dssp CCCEEEEECC-STTHHHHHHHHHTTTCEEEEEESCHHHHHHHHTTC---------TTEEEEECCTTCHHHHHHHHT--TS
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECChHHHHHHHhcc---------cccccccccccchhhhHhhhh--cc
Confidence 4689999998 99999999999999999999999765444333221 334555567777777888887 67
Q ss_pred CEEEEcc
Q 019795 83 EAVIHFG 89 (335)
Q Consensus 83 d~vi~~a 89 (335)
|.++.+.
T Consensus 69 ~~~i~~~ 75 (182)
T d1e5qa1 69 DLVISLI 75 (182)
T ss_dssp SEEEECS
T ss_pred ceeEeec
Confidence 8887654
|
| >d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: MJ0490, lactate/malate dehydrogenase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=98.21 E-value=1.2e-05 Score=60.46 Aligned_cols=117 Identities=15% Similarity=0.140 Sum_probs=75.8
Q ss_pred CeEEEEcCCChhhHHHHHHHHhCC--CeEEEEecCCCC--chhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcC
Q 019795 5 KNILVTGGAGFIGTHCALQLLQGG--FKVVLIDNLHNS--VPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQ 80 (335)
Q Consensus 5 ~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~ 80 (335)
|||.|+||+|.+|++++..|+.+| .++.++++.+.. .......+.+..... .........--.|. +.++
T Consensus 1 MKV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~~~g~a~Dl~~~~~~~-~~~~~~~~~~~~d~----~~l~-- 73 (145)
T d1hyea1 1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGT-RSDANIYVESDENL----RIID-- 73 (145)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTS-CCCCEEEEEETTCG----GGGT--
T ss_pred CEEEEECCCChHHHHHHHHHHhCCcccccccccchhhhHhhhcccccchhccccc-ccCCccccCCcchH----HHhc--
Confidence 579999999999999999999988 589999886432 122233344322111 12222221111122 2344
Q ss_pred CCCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEe
Q 019795 81 KFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFS 130 (335)
Q Consensus 81 ~~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~ 130 (335)
+.|+||-+||.+.. ..++-..+++.|+.....+.+.+.+.+.+.++.+
T Consensus 74 ~aDvVVitAG~~~~--~g~sR~dl~~~Na~iv~~i~~~i~~~~~~~iivV 121 (145)
T d1hyea1 74 ESDVVIITSGVPRK--EGMSRMDLAKTNAKIVGKYAKKIAEICDTKIFVI 121 (145)
T ss_dssp TCSEEEECCSCCCC--TTCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEC
T ss_pred cceEEEEecccccC--CCCChhhhhhhhHHHHHHHHHHHhccCCCeEEEE
Confidence 68999999997532 2334557899999999999999988865555544
|
| >d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Toxoplasma gondii [TaxId: 5811]
Probab=98.19 E-value=2.4e-06 Score=65.26 Aligned_cols=123 Identities=15% Similarity=0.130 Sum_probs=80.3
Q ss_pred CCCCCeEEEEcCCChhhHHHHHHHHhCC-CeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc
Q 019795 1 MASEKNILVTGGAGFIGTHCALQLLQGG-FKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS 79 (335)
Q Consensus 1 ~~~~~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~ 79 (335)
|.+.+||.|.|+ |.+|+.++..|..++ .++++++.++.........+.+...... ....... ..+.++.++
T Consensus 4 ~~k~~KI~IIGa-G~VG~~lA~~l~~~~~~el~L~D~~~~~~~g~a~Dl~~~~~~~~-~~~~~~~-----~~~~~~~~~- 75 (154)
T d1pzga1 4 VQRRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVD-TNVSVRA-----EYSYEAALT- 75 (154)
T ss_dssp CSCCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTT-CCCCEEE-----ECSHHHHHT-
T ss_pred ccCCCcEEEECC-CHHHHHHHHHHHhCCCceEEEEEeccccchhHHHHHhhhccccC-CeeEEec-----cCchhhhhc-
Confidence 456688999998 999999999888877 5899999877655555555544221000 1111111 112344555
Q ss_pred CCCCEEEEcccccchhh---hhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEecc
Q 019795 80 QKFEAVIHFGALKAVAE---SVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSS 132 (335)
Q Consensus 80 ~~~d~vi~~a~~~~~~~---~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss 132 (335)
+.|+|+-+|+...... ....-......|+.....+++.+.+.+.+.++.+-|
T Consensus 76 -~adiVvitag~~~~~g~~~~~~tR~~l~~~n~~iv~~i~~~i~~~~p~aiviivs 130 (154)
T d1pzga1 76 -GADCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPKTFIIVVT 130 (154)
T ss_dssp -TCSEEEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred -CCCeEEEecccccCCCCCCcccchhhhhhhhHHHHHHHHHHHHhcCCCcEEEEeC
Confidence 7899999998753221 122445678889999999999999887655554433
|
| >d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=98.04 E-value=6.2e-05 Score=56.39 Aligned_cols=115 Identities=21% Similarity=0.152 Sum_probs=75.3
Q ss_pred CeEEEEcCCChhhHHHHHHHHh-C--CCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCC
Q 019795 5 KNILVTGGAGFIGTHCALQLLQ-G--GFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQK 81 (335)
Q Consensus 5 ~~vlItGatG~iG~~l~~~L~~-~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~ 81 (335)
|||.|+|++|.+|++++..|.. . ..+++.++..+ ......-.+.+.... .....+ ....+.. .++ +
T Consensus 1 MKV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~-~~~g~a~Dl~h~~~~---~~~~~~----~~~~~~~-~~~--~ 69 (145)
T d2cmda1 1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSHIPTA---VKIKGF----SGEDATP-ALE--G 69 (145)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSST-THHHHHHHHHTSCSS---CEEEEE----CSSCCHH-HHT--T
T ss_pred CEEEEEcCCChHHHHHHHHHHhCCCCCcEEEEecccc-cchhHHHHHHCCccc---cCCcEE----EcCCCcc-ccC--C
Confidence 5899999999999999998854 3 47899998753 333333445443211 111111 1222233 344 6
Q ss_pred CCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCC-EEEEecc
Q 019795 82 FEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCK-KLVFSSS 132 (335)
Q Consensus 82 ~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~-~~v~~Ss 132 (335)
.|+||-+||.... ..++-.++.+.|......+.+.+.+.+.+ .++.+|.
T Consensus 70 aDvvvitaG~~~k--~g~~R~dl~~~N~~i~~~v~~~i~~~~p~aivivvtN 119 (145)
T d2cmda1 70 ADVVLISAGVRRK--PGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIITN 119 (145)
T ss_dssp CSEEEECCSCCCC--TTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECSS
T ss_pred CCEEEECCCccCC--CCcchhhHHHHHHHHHHHHHHHHHhhCCCcEEEEccC
Confidence 8999999998532 23344578889999999999999988654 4555553
|
| >d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=98.02 E-value=2e-05 Score=59.56 Aligned_cols=115 Identities=16% Similarity=0.225 Sum_probs=78.1
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhCC--CeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCC
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQGG--FKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQK 81 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~ 81 (335)
.+||.|+|+ |.+|++++..|+.+| .+++++++.+.........+.+... .....+.....|. + .+. +
T Consensus 6 ~~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~-~~~~~~~~~~~d~---~----~l~--d 74 (148)
T d1ldna1 6 GARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKV-FAPKPVDIWHGDY---D----DCR--D 74 (148)
T ss_dssp SCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTT-SSSSCCEEEECCG---G----GTT--T
T ss_pred CCeEEEECc-CHHHHHHHHHHHhcCCCceEEEEeeccccccchhccHhhCcc-ccCCCeEEEECCH---H----Hhc--c
Confidence 468999997 999999999999987 4799999876554444445554322 1123344444443 1 233 6
Q ss_pred CCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCC-EEEEec
Q 019795 82 FEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCK-KLVFSS 131 (335)
Q Consensus 82 ~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~-~~v~~S 131 (335)
.|+||.+|+..... .+.-.+....|+.....+.+.+++.+.+ .++.+|
T Consensus 75 aDvvvitag~~~~~--~~~R~dl~~~N~~i~~~i~~~i~~~~p~a~~ivvt 123 (148)
T d1ldna1 75 ADLVVICAGANQKP--GETRLDLVDKNIAIFRSIVESVMASGFQGLFLVAT 123 (148)
T ss_dssp CSEEEECCSCCCCT--TTCSGGGHHHHHHHHHHHHHHHHHHTCCSEEEECS
T ss_pred ceeEEEeccccccc--CcchhHHHHHHHHHHHHHHHHHHhhCCCceEEEec
Confidence 89999999975422 3344467888999999999998888654 444544
|
| >d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Clostridium thermocellum [TaxId: 1515]
Probab=98.01 E-value=5.1e-05 Score=56.73 Aligned_cols=113 Identities=14% Similarity=0.217 Sum_probs=73.2
Q ss_pred CeEEEEcCCChhhHHHHHHHHhCC--CeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCC
Q 019795 5 KNILVTGGAGFIGTHCALQLLQGG--FKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKF 82 (335)
Q Consensus 5 ~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~ 82 (335)
+||.|+|+ |.+|+.++..|+.++ .+++++++.+.........+.+.... ........+| .+ .+. +.
T Consensus 2 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~~~~~~--~~~~~~~~~~---~~----~~~--~a 69 (142)
T d1y6ja1 2 SKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPF--MGQMSLYAGD---YS----DVK--DC 69 (142)
T ss_dssp CCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCC--TTCEEEC--C---GG----GGT--TC
T ss_pred CeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeeccCccc--CCCeeEeeCc---HH----HhC--CC
Confidence 47888897 999999999999986 48999998887665555555553221 1223322222 21 233 68
Q ss_pred CEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCE-EEEec
Q 019795 83 EAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKK-LVFSS 131 (335)
Q Consensus 83 d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~-~v~~S 131 (335)
|+|+-+|+.... ..+.-......|+.....+++.+.+.+.+. ++.+|
T Consensus 70 divvitag~~~~--~~~~r~~l~~~N~~i~~~i~~~i~~~~p~ai~ivvt 117 (142)
T d1y6ja1 70 DVIVVTAGANRK--PGETRLDLAKKNVMIAKEVTQNIMKYYNHGVILVVS 117 (142)
T ss_dssp SEEEECCCC--------CHHHHHHHHHHHHHHHHHHHHHHCCSCEEEECS
T ss_pred ceEEEecccccC--cCcchhHHhhHHHHHHHHHHHHhhccCCCceEEEec
Confidence 999999997532 234556788999999999999999886544 44444
|
| >d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn bsu222 species: Bacillus subtilis [TaxId: 1423]
Probab=98.00 E-value=1.4e-05 Score=59.23 Aligned_cols=71 Identities=23% Similarity=0.249 Sum_probs=54.4
Q ss_pred CeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHH-HhcCCCC
Q 019795 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKL-FSSQKFE 83 (335)
Q Consensus 5 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~-~~~~~~d 83 (335)
|+++|.|. |-+|+++++.|.+.|++|++++.++.. .+++.. .....+.+|.++++.+.++ +. .+|
T Consensus 1 k~~iIiG~-G~~G~~la~~L~~~g~~vvvid~d~~~----~~~~~~-------~~~~~~~gd~~~~~~l~~a~i~--~a~ 66 (134)
T d2hmva1 1 KQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEK----VNAYAS-------YATHAVIANATEENELLSLGIR--NFE 66 (134)
T ss_dssp CCEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHH----HHHTTT-------TCSEEEECCTTCTTHHHHHTGG--GCS
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCCeEEEecCcHHH----HHHHHH-------hCCcceeeecccchhhhccCCc--ccc
Confidence 67889987 999999999999999999999875433 333322 3456788999999888876 55 678
Q ss_pred EEEEcc
Q 019795 84 AVIHFG 89 (335)
Q Consensus 84 ~vi~~a 89 (335)
.||-+.
T Consensus 67 ~vi~~~ 72 (134)
T d2hmva1 67 YVIVAI 72 (134)
T ss_dssp EEEECC
T ss_pred EEEEEc
Confidence 877543
|
| >d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase species: Guinea pig (Cavia porcellus) [TaxId: 10141]
Probab=97.96 E-value=5.3e-06 Score=65.28 Aligned_cols=108 Identities=15% Similarity=0.225 Sum_probs=68.7
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCC
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKF 82 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~ 82 (335)
++.+|||+||+|.+|..+++.....|++|+++++++.+ .+.+++.. ....+..-|-...+.+.+.....++
T Consensus 29 ~G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~----~~~~~~~G-----a~~vi~~~~~~~~~~~~~~~~~~Gv 99 (182)
T d1v3va2 29 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEK----IAYLKQIG-----FDAAFNYKTVNSLEEALKKASPDGY 99 (182)
T ss_dssp SSCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHH----HHHHHHTT-----CSEEEETTSCSCHHHHHHHHCTTCE
T ss_pred CCCEEEEEeCCCchhHHHHHHHHccCCEEEEeCCCHHH----HHHHHhhh-----hhhhcccccccHHHHHHHHhhcCCC
Confidence 56899999999999999999999999999999875432 22233221 1112222333344555666666789
Q ss_pred CEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccCCC
Q 019795 83 EAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYGQP 139 (335)
Q Consensus 83 d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~ 139 (335)
|+|+++.+.... ...++.++.. .+++.++....|+..
T Consensus 100 d~v~D~vG~~~~------------------~~~~~~l~~~--G~~v~~G~~~~~~~~ 136 (182)
T d1v3va2 100 DCYFDNVGGEFL------------------NTVLSQMKDF--GKIAICGAISVYNRM 136 (182)
T ss_dssp EEEEESSCHHHH------------------HHHGGGEEEE--EEEEECCCGGGTTCT
T ss_pred ceeEEecCchhh------------------hhhhhhccCC--CeEEeecceeecccc
Confidence 999998764111 0122233333 378888877666543
|
| >d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO) species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=97.93 E-value=2.9e-06 Score=67.37 Aligned_cols=46 Identities=20% Similarity=0.318 Sum_probs=39.1
Q ss_pred CeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhh
Q 019795 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKD 50 (335)
Q Consensus 5 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~ 50 (335)
|||.|+||+|.+|++|++.|+++|++|++.+|++.+..+..+++..
T Consensus 1 Mki~vigGaG~iG~alA~~la~~G~~V~l~~R~~e~~~~l~~~i~~ 46 (212)
T d1jaya_ 1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRR 46 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHH
T ss_pred CEEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh
Confidence 5788999999999999999999999999999987766666665554
|
| >d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Chlorobium vibrioforme [TaxId: 1098]
Probab=97.89 E-value=6.1e-05 Score=56.35 Aligned_cols=113 Identities=13% Similarity=0.050 Sum_probs=73.9
Q ss_pred CeEEEEcCCChhhHHHHHHHHhCC--CeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCC
Q 019795 5 KNILVTGGAGFIGTHCALQLLQGG--FKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKF 82 (335)
Q Consensus 5 ~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~ 82 (335)
|||.|+|| |.+|++++..|+.+| .+++++++++.........+.+.... ......+... .|.+ .+. +.
T Consensus 1 mKI~IIGa-G~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d~~~~~~~-~~~~~~i~~~--~~~~----~~~--da 70 (142)
T d1guza1 1 MKITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPV-GLFDTKVTGS--NDYA----DTA--NS 70 (142)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHH-HTCCCEEEEE--SCGG----GGT--TC
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCCCceEEEeccccccchhhhhhhhcccch-hcccceEEec--CCHH----Hhc--CC
Confidence 57889997 999999999999987 68999998776544433333222110 0122233222 1222 234 78
Q ss_pred CEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEE
Q 019795 83 EAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVF 129 (335)
Q Consensus 83 d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~ 129 (335)
|+|+-+||.+... .+.-....+.|+.-...+++.+.+.+.+-++.
T Consensus 71 dvvvitag~~~~~--g~~r~~l~~~N~~i~~~i~~~i~~~~p~aivi 115 (142)
T d1guza1 71 DIVIITAGLPRKP--GMTREDLLMKNAGIVKEVTDNIMKHSKNPIII 115 (142)
T ss_dssp SEEEECCSCCCCT--TCCHHHHHHHHHHHHHHHHHHHHHHCSSCEEE
T ss_pred eEEEEEEecCCCC--CCchHHHHHHHHHHHHHHHHHhhccCCCeEEE
Confidence 9999999975322 23345778889999999999998876544443
|
| >d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Archaeon Haloarcula marismortui [TaxId: 2238]
Probab=97.86 E-value=6.5e-05 Score=56.04 Aligned_cols=113 Identities=13% Similarity=0.123 Sum_probs=75.3
Q ss_pred eEEEEcCCChhhHHHHHHHHhCC--CeEEEEecCCCC--chhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCC
Q 019795 6 NILVTGGAGFIGTHCALQLLQGG--FKVVLIDNLHNS--VPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQK 81 (335)
Q Consensus 6 ~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~ 81 (335)
||.|+||+|.+|++++..|..++ -++++++..... .....-.+.+.... .........|. ++ +. +
T Consensus 2 KV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~~g~a~Dl~~~~~~--~~~~~i~~~~~---~~----~~--~ 70 (142)
T d1o6za1 2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAY--DSNTRVRQGGY---ED----TA--G 70 (142)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTT--TCCCEEEECCG---GG----GT--T
T ss_pred eEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecCCcccccceeecchhhcccc--cCCceEeeCCH---HH----hh--h
Confidence 78999999999999999999987 478888863221 22222334432221 13344444432 21 33 7
Q ss_pred CCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCE-EEEec
Q 019795 82 FEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKK-LVFSS 131 (335)
Q Consensus 82 ~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~-~v~~S 131 (335)
.|+|+-+||.+.. ..++-.+.++.|+.....+.+.+++.+.+. ++.+|
T Consensus 71 aDiVvitaG~~~~--~g~~R~dl~~~N~~I~~~i~~~i~~~~p~~i~ivvt 119 (142)
T d1o6za1 71 SDVVVITAGIPRQ--PGQTRIDLAGDNAPIMEDIQSSLDEHNDDYISLTTS 119 (142)
T ss_dssp CSEEEECCCCCCC--TTCCHHHHHHHHHHHHHHHHHHHHTTCSCCEEEECC
T ss_pred cCEEEEecccccc--cCCchhhHHHHHHHHHHHHHHHHHhcCCCceEEEec
Confidence 8999999997532 234556889999999999999999886544 44444
|
| >d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=97.82 E-value=5.3e-05 Score=56.63 Aligned_cols=115 Identities=12% Similarity=0.091 Sum_probs=74.9
Q ss_pred CeEEEEcCCChhhHHHHHHHHhCC--CeEEEEecCCCCchhhHHhhhhhcCCccccceeEEE-ccCCCHHHHHHHHhcCC
Q 019795 5 KNILVTGGAGFIGTHCALQLLQGG--FKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHV-GDLRNKDDLDKLFSSQK 81 (335)
Q Consensus 5 ~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~-~Dl~d~~~~~~~~~~~~ 81 (335)
|||.|+|+ |.+|++++..|+.+| .+++++++++.......-.+.+.... .+....... .|.. .++ .
T Consensus 1 MKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~alDl~~~~~~-~~~~~~i~~~~d~~-------~~~--~ 69 (142)
T d1ojua1 1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAG-IDKYPKIVGGADYS-------LLK--G 69 (142)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHT-TTCCCEEEEESCGG-------GGT--T
T ss_pred CEEEEECc-CHHHHHHHHHHHhcCcCceEEEEecccchhhHHHHHHhhhccc-cCCCCccccCCCHH-------Hhc--c
Confidence 58889997 999999999999877 57999998665444433344432210 001122222 2321 344 6
Q ss_pred CCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEecc
Q 019795 82 FEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSS 132 (335)
Q Consensus 82 ~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss 132 (335)
.|+||-.|+.+.. ..+.-.+....|+.....+.+.+.+.+.+.++.+-|
T Consensus 70 adiVvitag~~~~--~g~~r~~l~~~n~~i~~~i~~~i~~~~p~aivivvt 118 (142)
T d1ojua1 70 SEIIVVTAGLARK--PGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVT 118 (142)
T ss_dssp CSEEEECCCCCCC--SSCCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECS
T ss_pred ccEEEEeccccCC--CCCchHHHHHHhhHHHHHHHHHHHhhCCCcEEEEec
Confidence 8999999987532 234556788889999999999999886554444333
|
| >d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.82 E-value=7.5e-06 Score=63.84 Aligned_cols=76 Identities=18% Similarity=0.242 Sum_probs=51.9
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCH---HHHHHHHhc
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNK---DDLDKLFSS 79 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~---~~~~~~~~~ 79 (335)
++.+|||+||+|.+|...++.+...|++|+++++++.+ .+.+++... . .+ .|.+++ +.+.+....
T Consensus 28 ~g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~----~~~~~~~Ga----~--~v--i~~~~~~~~~~i~~~t~~ 95 (174)
T d1yb5a2 28 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEG----QKIVLQNGA----H--EV--FNHREVNYIDKIKKYVGE 95 (174)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHH----HHHHHHTTC----S--EE--EETTSTTHHHHHHHHHCT
T ss_pred CCCEEEEEeccccccccccccccccCcccccccccccc----cccccccCc----c--cc--cccccccHHHHhhhhhcc
Confidence 56789999999999999999999999999999875332 222222211 1 12 244443 344455555
Q ss_pred CCCCEEEEccc
Q 019795 80 QKFEAVIHFGA 90 (335)
Q Consensus 80 ~~~d~vi~~a~ 90 (335)
.++|+|+.+.+
T Consensus 96 ~g~d~v~d~~g 106 (174)
T d1yb5a2 96 KGIDIIIEMLA 106 (174)
T ss_dssp TCEEEEEESCH
T ss_pred CCceEEeeccc
Confidence 67999998765
|
| >d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH species: Lactobacillus confusus [TaxId: 1583]
Probab=97.81 E-value=5.9e-05 Score=56.62 Aligned_cols=115 Identities=15% Similarity=0.133 Sum_probs=73.1
Q ss_pred CeEEEEcCCChhhHHHHHHHHhCC--CeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCC
Q 019795 5 KNILVTGGAGFIGTHCALQLLQGG--FKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKF 82 (335)
Q Consensus 5 ~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~ 82 (335)
|||.|+|+ |.+|+.++..|+.+| .+++++++++.........+.+... ...........|. + .++ +.
T Consensus 2 kKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl~~a~~-~~~~~~~~~~~d~---~----~l~--~a 70 (146)
T d1hyha1 2 RKIGIIGL-GNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMA-NLEAHGNIVINDW---A----ALA--DA 70 (146)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGG-GSSSCCEEEESCG---G----GGT--TC
T ss_pred CeEEEECc-CHHHHHHHHHHHhcCCCceEEEEecccchhhhHHHhhhcccc-ccCCccceeccCH---H----Hhc--cc
Confidence 78999996 999999999999876 5899998876554444444443322 1112333333332 2 233 68
Q ss_pred CEEEEcccccchhhh--hcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEe
Q 019795 83 EAVIHFGALKAVAES--VQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFS 130 (335)
Q Consensus 83 d~vi~~a~~~~~~~~--~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~ 130 (335)
|+||-+||....... ..+-....+.|+.....+.+.+++.+.+.++.+
T Consensus 71 diVVitaG~~~~~~~~~g~~R~~l~~~N~~i~~~i~~~i~~~~p~aiviv 120 (146)
T d1hyha1 71 DVVISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESGFHGVLVV 120 (146)
T ss_dssp SEEEECCSCGGGTC-------CTTHHHHHHHHHHHHHHHHHTTCCSEEEE
T ss_pred cEEEEeccccccccccCCccHHHHHHHHHHHHHHHHHHHhhcCCCeEEEE
Confidence 999999997532211 112234677899999999999988865544443
|
| >d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=97.80 E-value=6e-05 Score=57.23 Aligned_cols=122 Identities=18% Similarity=0.112 Sum_probs=70.9
Q ss_pred CCCCCeEEEEcCCChhhHHHHHHHHhCCC-------eEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHH
Q 019795 1 MASEKNILVTGGAGFIGTHCALQLLQGGF-------KVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDL 73 (335)
Q Consensus 1 ~~~~~~vlItGatG~iG~~l~~~L~~~g~-------~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~ 73 (335)
|-+.++|.|+||+|++|++++..|...+. ....+.. .......+.+..............+... +..
T Consensus 1 m~~p~KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~ 74 (154)
T d1y7ta1 1 MKAPVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEI--PQAMKALEGVVMELEDCAFPLLAGLEAT----DDP 74 (154)
T ss_dssp CCCCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECC--GGGHHHHHHHHHHHHTTTCTTEEEEEEE----SCH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHhccccccccchhHhHhcc--ccchhhHcCchhhhhccccccccccccC----Cch
Confidence 45567999999999999999999988642 1122221 1111111111100000001222223222 112
Q ss_pred HHHHhcCCCCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcC-CC-EEEEecc
Q 019795 74 DKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYN-CK-KLVFSSS 132 (335)
Q Consensus 74 ~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~-~~v~~Ss 132 (335)
.+.++ +.|+||-+||.... ..++-+..+..|+.....+.+.+.+.. .. .++.+|.
T Consensus 75 ~~~~~--~advViitaG~~~~--pg~~r~dl~~~N~~i~~~~~~~i~k~a~~~~~vivvsN 131 (154)
T d1y7ta1 75 KVAFK--DADYALLVGAAPRK--AGMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGN 131 (154)
T ss_dssp HHHTT--TCSEEEECCCCCCC--TTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred hhhcc--cccEEEeecCcCCC--CCCcHHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEecC
Confidence 34555 78999999998532 344555788899999999999988853 22 4445553
|
| >d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=97.80 E-value=7e-05 Score=55.85 Aligned_cols=113 Identities=18% Similarity=0.180 Sum_probs=75.1
Q ss_pred CeEEEEcCCChhhHHHHHHHHhCC--CeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCC
Q 019795 5 KNILVTGGAGFIGTHCALQLLQGG--FKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKF 82 (335)
Q Consensus 5 ~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~ 82 (335)
|||.|.|+ |.+|+.++..|+.++ .+++++++.+.........+.+..... ........| .+ .++ +.
T Consensus 1 mKI~IIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~~~~~~--~~~~~~~~~---~~----~~~--~a 68 (140)
T d1a5za1 1 MKIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFT--RRANIYAGD---YA----DLK--GS 68 (140)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGS--CCCEEEECC---GG----GGT--TC
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEecccccccchhcccccccccc--ccccccCCc---HH----Hhc--CC
Confidence 58889997 999999999998876 689999987654443333333322111 233333333 22 234 68
Q ss_pred CEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEec
Q 019795 83 EAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSS 131 (335)
Q Consensus 83 d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~S 131 (335)
|+|+-+|+.... ..+.-.+++..|+.-...+++.+.+.+.+.++.+-
T Consensus 69 divvitag~~~~--~g~~r~dl~~~N~~I~~~i~~~i~~~~p~aivivv 115 (140)
T d1a5za1 69 DVVIVAAGVPQK--PGETRLQLLGRNARVMKEIARNVSKYAPDSIVIVV 115 (140)
T ss_dssp SEEEECCCCCCC--SSCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEC
T ss_pred CEEEEecccccC--CCcchhhhhccccchHHHHHHHHHhcCCCcEEEEe
Confidence 999999987542 23344577888999999999999988765555443
|
| >d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]
Probab=97.78 E-value=0.00011 Score=55.96 Aligned_cols=117 Identities=15% Similarity=0.204 Sum_probs=78.2
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCC--eEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcC
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGF--KVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQ 80 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~ 80 (335)
+.+||.|.|+ |.+|+.++..|..+|. +++++++++.........+.+... ..+........|..+ ++
T Consensus 19 ~~~KV~IIGa-G~VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alDl~h~~~-~~~~~~~~~~~d~~~-------~~-- 87 (160)
T d1i0za1 19 PNNKITVVGV-GQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQHGSL-FLQTPKIVADKDYSV-------TA-- 87 (160)
T ss_dssp CSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGG-GCCCSEEEECSSGGG-------GT--
T ss_pred CCCeEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHHHhcccc-ccCCCeEEeccchhh-------cc--
Confidence 4578999997 9999999999999984 799999865554444444444221 111222222233222 33
Q ss_pred CCCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCC-EEEEecc
Q 019795 81 KFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCK-KLVFSSS 132 (335)
Q Consensus 81 ~~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~-~~v~~Ss 132 (335)
+.|+||.+||.... ..++-....+.|+.....++..+++.+.+ -++.+|.
T Consensus 88 ~adiVVitAg~~~~--~g~tR~~l~~~N~~i~~~i~~~i~~~~p~aiiivvtN 138 (160)
T d1i0za1 88 NSKIVVVTAGVRQQ--EGESRLNLVQRNVNVFKFIIPQIVKYSPDCIIIVVSN 138 (160)
T ss_dssp TCSEEEECCSCCCC--TTCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECSS
T ss_pred cccEEEEecCCccc--cCcchHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeCC
Confidence 68999999997543 23445578888999999999999888654 4555553
|
| >d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Glycinamide ribonucleotide transformylase PurT, N-domain species: Escherichia coli [TaxId: 562]
Probab=97.74 E-value=9.6e-05 Score=52.56 Aligned_cols=70 Identities=19% Similarity=0.332 Sum_probs=56.8
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCCC
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKFE 83 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~d 83 (335)
..+|.|.|| |.+|+-++....+.|+++++++.++....... .-.++.+|..|.+.+.++....++|
T Consensus 11 ~~kigIlGg-GQL~rMla~aA~~lG~~v~v~d~~~~~PA~~v-------------a~~~i~~~~~d~~~l~~~~~~~~~D 76 (111)
T d1kjqa2 11 ATRVMLLGS-GELGKEVAIECQRLGVEVIAVDRYADAPAMHV-------------AHRSHVINMLDGDALRRVVELEKPH 76 (111)
T ss_dssp CCEEEEESC-SHHHHHHHHHHHTTTCEEEEEESSTTCGGGGG-------------SSEEEECCTTCHHHHHHHHHHHCCS
T ss_pred CCEEEEEeC-CHHHHHHHHHHHHCCCEEEEEcCCCCCchhhc-------------CCeEEECCCCCHHHHHHHHHhhCCc
Confidence 467999996 99999999999999999999998766543221 2257889999999999988655789
Q ss_pred EEEE
Q 019795 84 AVIH 87 (335)
Q Consensus 84 ~vi~ 87 (335)
+|-.
T Consensus 77 viT~ 80 (111)
T d1kjqa2 77 YIVP 80 (111)
T ss_dssp EEEE
T ss_pred eEEE
Confidence 8864
|
| >d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Chloroflexus aurantiacus [TaxId: 1108]
Probab=97.71 E-value=9.1e-05 Score=55.33 Aligned_cols=114 Identities=12% Similarity=0.071 Sum_probs=69.8
Q ss_pred CeEEEEcCCChhhHHHHHHHHhCC-CeEEEEecCCCCchhhHHhhhhhcCCccccceeEE-EccCCCHHHHHHHHhcCCC
Q 019795 5 KNILVTGGAGFIGTHCALQLLQGG-FKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFH-VGDLRNKDDLDKLFSSQKF 82 (335)
Q Consensus 5 ~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~Dl~d~~~~~~~~~~~~~ 82 (335)
+||.|+|+ |.+|+.++..|+.++ .++++++..+.........+.+.... .+....+. ..|.. + +. ..
T Consensus 2 ~KI~IIGa-G~VG~~~A~~l~~~~l~dl~l~D~~~~~~~~~~~Dl~~~~~~-~~~~~~i~~~~d~~------~-~~--~a 70 (142)
T d1uxja1 2 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPI-EGFDVRVTGTNNYA------D-TA--NS 70 (142)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSSSSHHHHHHHHHHTTHHH-HTCCCCEEEESCGG------G-GT--TC
T ss_pred CeEEEECC-CHHHHHHHHHHHhCCcceEEEEeeccccchhHHHHhhccccc-cCCCCEEEecCcHH------H-hc--CC
Confidence 58889997 999999999998876 58999988766544444444322110 00122222 12221 2 23 67
Q ss_pred CEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEec
Q 019795 83 EAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSS 131 (335)
Q Consensus 83 d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~S 131 (335)
|+||-+||.+... .+.....+..|+.....+++...+.+.+.++.+-
T Consensus 71 dvvvitag~~~~~--~~~r~dl~~~N~~i~~~i~~~i~k~~p~aivivv 117 (142)
T d1uxja1 71 DVIVVTSGAPRKP--GMSREDLIKVNADITRACISQAAPLSPNAVIIMV 117 (142)
T ss_dssp SEEEECCSCC-----------CHHHHHHHHHHHHHHHGGGCTTCEEEEC
T ss_pred CEEEEeeeccCCc--CcchhHHHhHHHHHHHHHHHHHhccCCCceEEEe
Confidence 9999999975422 2334467788999999999999887655444443
|
| >d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.69 E-value=6.6e-05 Score=57.09 Aligned_cols=117 Identities=16% Similarity=0.165 Sum_probs=75.8
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCC--CeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcC
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGG--FKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQ 80 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~ 80 (335)
+..+|.|+|+ |.+|+.++..|..+| .+++++++++.........+.+..... +........|.. .+.
T Consensus 18 ~~~KI~IIGa-G~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~~~~~~-~~~~~~~~~d~~-------~~~-- 86 (159)
T d2ldxa1 18 SRCKITVVGV-GDVGMACAISILLKGLADELALVDADTDKLRGEALDLQHGSLFL-STPKIVFGKDYN-------VSA-- 86 (159)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHHHHHHTTTTC-SCCEEEEESSGG-------GGT--
T ss_pred CCCeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCchhhhccHHHHhCcchhc-CCCeEEeccchh-------hhc--
Confidence 3457999996 999999999999987 479999887554444444555432211 122222223322 223
Q ss_pred CCCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCC-EEEEecc
Q 019795 81 KFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCK-KLVFSSS 132 (335)
Q Consensus 81 ~~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~-~~v~~Ss 132 (335)
+.|+||-+||..... .++-...++.|+.....+...+.+.+.+ .++.+|.
T Consensus 87 ~adivvitag~~~~~--~~~R~dll~~N~~i~~~i~~~i~~~~p~~ivivvtN 137 (159)
T d2ldxa1 87 NSKLVIITAGARMVS--GQTRLDLLQRNVAIMKAIVPGVIQNSPDCKIIVVTN 137 (159)
T ss_dssp TEEEEEECCSCCCCT--TTCSSCTTHHHHHHHHHHTTTHHHHSTTCEEEECSS
T ss_pred cccEEEEecccccCC--CCCHHHHHHHHHHHHHHHHHHHhccCCCeEEEEeCC
Confidence 679999999875432 2333466888999999999988887654 4445443
|
| >d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=97.69 E-value=0.00023 Score=53.24 Aligned_cols=35 Identities=14% Similarity=0.301 Sum_probs=27.5
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhCC----CeEEEEecCC
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQGG----FKVVLIDNLH 38 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~g----~~V~~~~r~~ 38 (335)
||+|.|.||||++|+.+++.|++.. .+++.+..+.
T Consensus 1 MkkVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~ 39 (146)
T d1t4ba1 1 MQNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQ 39 (146)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSS
T ss_pred CcEEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeeccc
Confidence 6799999999999999999887753 3466665543
|
| >d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]
Probab=97.68 E-value=0.00017 Score=53.72 Aligned_cols=114 Identities=14% Similarity=0.156 Sum_probs=75.5
Q ss_pred CeEEEEcCCChhhHHHHHHHHhCC--CeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCC
Q 019795 5 KNILVTGGAGFIGTHCALQLLQGG--FKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKF 82 (335)
Q Consensus 5 ~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~ 82 (335)
.||.|+|+ |.+|++++..|+.+| .+++++++.+.........+.+..... ........+ +. + .++ ..
T Consensus 2 ~Ki~IIGa-G~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~Dl~~a~~~~--~~~~i~~~~--~~---~-~~~--da 70 (143)
T d1llda1 2 TKLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFY--PTVSIDGSD--DP---E-ICR--DA 70 (143)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGS--TTCEEEEES--CG---G-GGT--TC
T ss_pred CEEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccccchhHHHHHHhccccC--CCceeecCC--CH---H-Hhh--CC
Confidence 47889997 999999999999987 479999987654443333444432211 222332222 21 1 233 67
Q ss_pred CEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEE-Eec
Q 019795 83 EAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLV-FSS 131 (335)
Q Consensus 83 d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v-~~S 131 (335)
|+||-+||.... ..+.-.+.+..|+.-...+...+.+.+.+.++ .+|
T Consensus 71 DvVVitaG~~~~--~g~~R~dl~~~N~~i~~~i~~~i~~~~p~ai~ivvt 118 (143)
T d1llda1 71 DMVVITAGPRQK--PGQSRLELVGATVNILKAIMPNLVKVAPNAIYMLIT 118 (143)
T ss_dssp SEEEECCCCCCC--TTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECC
T ss_pred cEEEEecccccC--CCCchhhhhhhhHHHHHHHHHHHHhhCCCeEEEEeC
Confidence 999999998542 23445578889999999999999888755444 444
|
| >d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Putative shikimate dehydrogenase YdiB species: Escherichia coli [TaxId: 562]
Probab=97.67 E-value=0.00014 Score=56.82 Aligned_cols=84 Identities=13% Similarity=0.170 Sum_probs=61.7
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcC
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGF-KVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQ 80 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~ 80 (335)
.++|+|+|.|+ |+.|++++..|.+.|. ++++++|++...........+... . -.......|+.+.+++.+.+.
T Consensus 16 l~~k~vlIlGa-GGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~-- 89 (182)
T d1vi2a1 16 IKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNE-N--TDCVVTVTDLADQQAFAEALA-- 89 (182)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHH-H--SSCEEEEEETTCHHHHHHHHH--
T ss_pred cCCCEEEEECC-cHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHh-h--cCcceEeeecccccchhhhhc--
Confidence 36789999998 8999999999999986 688889987765544332221110 0 224455678889888888887
Q ss_pred CCCEEEEcccc
Q 019795 81 KFEAVIHFGAL 91 (335)
Q Consensus 81 ~~d~vi~~a~~ 91 (335)
.+|+|||+...
T Consensus 90 ~~diiIN~Tp~ 100 (182)
T d1vi2a1 90 SADILTNGTKV 100 (182)
T ss_dssp TCSEEEECSST
T ss_pred ccceeccccCC
Confidence 78999998765
|
| >d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=97.67 E-value=0.00024 Score=53.39 Aligned_cols=118 Identities=14% Similarity=0.076 Sum_probs=76.1
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhCC-CeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCC
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQGG-FKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKF 82 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~ 82 (335)
.+||.|.|+ |.+|++++..|..++ .+++++++.+.........+.+..... .........+ +. +.++ +.
T Consensus 3 ~~KI~IIGa-G~VG~~~a~~l~~~~l~el~L~Di~~~~~~g~a~Dl~~~~~~~-~~~~~v~~~~--~~----~~~~--~a 72 (150)
T d1t2da1 3 KAKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMA-YSNCKVSGSN--TY----DDLA--GA 72 (150)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHH-TCCCCEEEEC--CG----GGGT--TC
T ss_pred CCeEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccCCcceeeecchhhhcccc-CCCcEEEecc--cc----cccC--CC
Confidence 468999996 999999998888776 578899987765554444454432100 0222333222 22 1233 68
Q ss_pred CEEEEcccccchhh---hhcChHHHHHHhHHHHHHHHHHHHHcCCCEEE-Eec
Q 019795 83 EAVIHFGALKAVAE---SVQHPFRYFDNNLIGTINLYQAMAKYNCKKLV-FSS 131 (335)
Q Consensus 83 d~vi~~a~~~~~~~---~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v-~~S 131 (335)
|+|+-+|+...... ...+-..++..|+.....+++.+++.+.+.++ .+|
T Consensus 73 dvvvitag~~~~~g~~~~~~~R~~l~~~N~~iv~~i~~~i~~~~p~aivivvt 125 (150)
T d1t2da1 73 DVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNAFIIVVT 125 (150)
T ss_dssp SEEEECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred cEEEEecccccCCCCCccccchhHHHHHHHHHHHHHHHHHHhcCCCeEEEEec
Confidence 99999999753221 11234467889999999999999988765544 444
|
| >d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: B. subtilis YhfP homologue species: Bacillus stearothermophilus [TaxId: 1422]
Probab=97.62 E-value=5.8e-05 Score=58.63 Aligned_cols=77 Identities=17% Similarity=0.139 Sum_probs=49.4
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCCC
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKFE 83 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~d 83 (335)
+.+|||+||+|.+|...++.+...|.+|+++++++.+..... .+ . .. ..+.-+-.+ ++........++|
T Consensus 32 g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~~~~~-~l---G-----a~-~vi~~~~~~-~~~~~~~~~~gvD 100 (176)
T d1xa0a2 32 RGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLR-VL---G-----AK-EVLAREDVM-AERIRPLDKQRWA 100 (176)
T ss_dssp GCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHH-HT---T-----CS-EEEECC----------CCSCCEE
T ss_pred CCEEEEEeccchHHHHHHHHHHHcCCceEEecCchHHHHHHH-hc---c-----cc-eeeecchhH-HHHHHHhhccCcC
Confidence 568999999999999999999999999999998776643322 22 1 11 122211111 2233344556899
Q ss_pred EEEEcccc
Q 019795 84 AVIHFGAL 91 (335)
Q Consensus 84 ~vi~~a~~ 91 (335)
+||.+.+-
T Consensus 101 ~vid~vgg 108 (176)
T d1xa0a2 101 AAVDPVGG 108 (176)
T ss_dssp EEEECSTT
T ss_pred EEEEcCCc
Confidence 99998765
|
| >d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]
Probab=97.56 E-value=0.00053 Score=52.85 Aligned_cols=115 Identities=18% Similarity=0.121 Sum_probs=69.8
Q ss_pred CeEEEEcCCChhhHHHHHHHHhCC-----C--eEEEEecCCCCc--hhhHHhhhhhcCCccccceeEEEccCCCHHHHHH
Q 019795 5 KNILVTGGAGFIGTHCALQLLQGG-----F--KVVLIDNLHNSV--PEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDK 75 (335)
Q Consensus 5 ~~vlItGatG~iG~~l~~~L~~~g-----~--~V~~~~r~~~~~--~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~ 75 (335)
.+|.||||+|.||++|+..|++.. . .++.++...... ....-.+.+... +....+.. . .+..+
T Consensus 25 ~kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~~~l~g~~mdl~d~a~----~~~~~~~~--~--~~~~~ 96 (175)
T d7mdha1 25 VNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLY----PLLREVSI--G--IDPYE 96 (175)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTC----TTEEEEEE--E--SCHHH
T ss_pred cEEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccccchhcchhhhhccccc----ccccCccc--c--ccchh
Confidence 469999999999999999998742 1 444554432211 111111222111 11111111 1 12334
Q ss_pred HHhcCCCCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCC-C-EEEEec
Q 019795 76 LFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNC-K-KLVFSS 131 (335)
Q Consensus 76 ~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~-~-~~v~~S 131 (335)
.++ +.|+||-+||... ...+.-.+.+..|+.....+.+++.+... . +++.+|
T Consensus 97 ~~~--~aDvVvi~ag~~r--kpg~tR~Dll~~N~~I~k~~~~~i~~~a~~~~~vlvv~ 150 (175)
T d7mdha1 97 VFE--DVDWALLIGAKPR--GPGMERAALLDINGQIFADQGKALNAVASKNVKVLVVG 150 (175)
T ss_dssp HTT--TCSEEEECCCCCC--CTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred hcc--CCceEEEeeccCC--CCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCcEEEEec
Confidence 566 7899999998853 23455668899999999999999988632 2 455555
|
| >d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Thermus thermophilus [TaxId: 274]
Probab=97.56 E-value=0.0001 Score=56.90 Aligned_cols=75 Identities=15% Similarity=0.157 Sum_probs=50.8
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCC
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQK 81 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~ 81 (335)
.++++|+|+||+|.+|...++.+...|++|+++++++.+.... .++. ...+ .|..+ ...++-...+
T Consensus 26 ~~g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~~~~----~~lG-------a~~~-i~~~~--~~~~~~~~~g 91 (171)
T d1iz0a2 26 RPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALP----LALG-------AEEA-ATYAE--VPERAKAWGG 91 (171)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHH----HHTT-------CSEE-EEGGG--HHHHHHHTTS
T ss_pred CCCCEEEEEeccccchhhhhhhhcccccccccccccccccccc----cccc-------ccee-eehhh--hhhhhhcccc
Confidence 3678999999999999999999999999999998865443322 2221 1111 13332 2333334458
Q ss_pred CCEEEEccc
Q 019795 82 FEAVIHFGA 90 (335)
Q Consensus 82 ~d~vi~~a~ 90 (335)
+|+||.+.|
T Consensus 92 ~D~v~d~~G 100 (171)
T d1iz0a2 92 LDLVLEVRG 100 (171)
T ss_dssp EEEEEECSC
T ss_pred ccccccccc
Confidence 999999766
|
| >d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Probab=97.49 E-value=4.4e-05 Score=50.32 Aligned_cols=38 Identities=26% Similarity=0.486 Sum_probs=33.6
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCC
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNS 40 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~ 40 (335)
++++|||+||+|.+|...++.+...|++|+++++++++
T Consensus 31 ~~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k 68 (77)
T d1o8ca2 31 QDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGREST 68 (77)
T ss_dssp GGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGG
T ss_pred CCCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCHHH
Confidence 35789999999999999999988899999999886544
|
| >d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamyl tRNA-reductase middle domain species: Archaeon Methanopyrus kandleri [TaxId: 2320]
Probab=97.41 E-value=0.00012 Score=55.75 Aligned_cols=73 Identities=22% Similarity=0.284 Sum_probs=52.3
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcC
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGF-KVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQ 80 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~ 80 (335)
+++++|||.|+ |-+|+.+++.|...|+ ++++..|+..+.......+ +... .+.+++.+.+.
T Consensus 22 l~~~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~----------~~~~-----~~~~~~~~~l~-- 83 (159)
T d1gpja2 22 LHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDL----------GGEA-----VRFDELVDHLA-- 83 (159)
T ss_dssp CTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHH----------TCEE-----CCGGGHHHHHH--
T ss_pred cccCeEEEECC-CHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhh----------hccc-----ccchhHHHHhc--
Confidence 46899999998 9999999999999997 6888888644433332221 1111 23456777777
Q ss_pred CCCEEEEccccc
Q 019795 81 KFEAVIHFGALK 92 (335)
Q Consensus 81 ~~d~vi~~a~~~ 92 (335)
.+|+||.+.+..
T Consensus 84 ~~Divi~atss~ 95 (159)
T d1gpja2 84 RSDVVVSATAAP 95 (159)
T ss_dssp TCSEEEECCSSS
T ss_pred cCCEEEEecCCC
Confidence 789999987653
|
| >d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Siroheme synthase N-terminal domain-like domain: Siroheme synthase CysG, domain 1 species: Salmonella typhimurium [TaxId: 90371]
Probab=97.38 E-value=0.00099 Score=47.30 Aligned_cols=95 Identities=14% Similarity=0.097 Sum_probs=62.7
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCC
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQK 81 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~ 81 (335)
+++|+|+|.|+ |-+|..-++.|++.|.+|++++..... +... +.+. .++.++..+..+.+ +. +
T Consensus 10 l~~k~vlVvG~-G~va~~ka~~ll~~ga~v~v~~~~~~~--~~~~-~~~~------~~i~~~~~~~~~~d-----l~--~ 72 (113)
T d1pjqa1 10 LRDRDCLIVGG-GDVAERKARLLLEAGARLTVNALTFIP--QFTV-WANE------GMLTLVEGPFDETL-----LD--S 72 (113)
T ss_dssp CBTCEEEEECC-SHHHHHHHHHHHHTTBEEEEEESSCCH--HHHH-HHTT------TSCEEEESSCCGGG-----GT--T
T ss_pred eCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeccCCh--HHHH-HHhc------CCceeeccCCCHHH-----hC--C
Confidence 46899999998 999999999999999999999764332 2222 2111 46777776665432 33 5
Q ss_pred CCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEecc
Q 019795 82 FEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSS 132 (335)
Q Consensus 82 ~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss 132 (335)
.+.|+.+.+.... ...+.+.|++.+ .+|++..
T Consensus 73 ~~lv~~at~d~~~-----------------n~~i~~~a~~~~--ilVNv~D 104 (113)
T d1pjqa1 73 CWLAIAATDDDTV-----------------NQRVSDAAESRR--IFCNVVD 104 (113)
T ss_dssp CSEEEECCSCHHH-----------------HHHHHHHHHHTT--CEEEETT
T ss_pred CcEEeecCCCHHH-----------------HHHHHHHHHHcC--CEEEeCC
Confidence 6877765333111 124777788776 4777654
|
| >d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Glycerol-3- phosphate dehydrogenase species: Trypanosome (Leishmania mexicana) [TaxId: 5665]
Probab=97.36 E-value=2.4e-05 Score=61.72 Aligned_cols=74 Identities=23% Similarity=0.332 Sum_probs=50.8
Q ss_pred CCCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhc-------CCccccceeEEEccCCCHHHH
Q 019795 1 MASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLA-------GPELAKKLEFHVGDLRNKDDL 73 (335)
Q Consensus 1 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-------~~~~~~~i~~~~~Dl~d~~~~ 73 (335)
||+|++|.|.|+ |-.|++++..|.++|++|++.+|++. ..+.+.+.. +..+++++.+ ..++
T Consensus 4 ~~~m~KI~ViGa-G~wGtAlA~~La~~g~~V~l~~r~~~----~~~~i~~~~~n~~yl~~~~l~~~i~~-------t~~l 71 (189)
T d1n1ea2 4 LLYLNKAVVFGS-GAFGTALAMVLSKKCREVCVWHMNEE----EVRLVNEKRENVLFLKGVQLASNITF-------TSDV 71 (189)
T ss_dssp CCCEEEEEEECC-SHHHHHHHHHHHTTEEEEEEECSCHH----HHHHHHHHTBCTTTSTTCBCCTTEEE-------ESCH
T ss_pred cceeceEEEECC-CHHHHHHHHHHHHcCCeEEEEEecHH----HHHHHhhccccccccccccccccccc-------chhh
Confidence 688899999997 99999999999999999999988533 233332211 1112233322 2346
Q ss_pred HHHHhcCCCCEEEEc
Q 019795 74 DKLFSSQKFEAVIHF 88 (335)
Q Consensus 74 ~~~~~~~~~d~vi~~ 88 (335)
.++++ ..|+||-+
T Consensus 72 ~~a~~--~ad~iiia 84 (189)
T d1n1ea2 72 EKAYN--GAEIILFV 84 (189)
T ss_dssp HHHHT--TCSCEEEC
T ss_pred hhccC--CCCEEEEc
Confidence 67777 67988864
|
| >d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Haemophilus influenzae [TaxId: 727]
Probab=97.34 E-value=0.00011 Score=55.57 Aligned_cols=37 Identities=24% Similarity=0.418 Sum_probs=33.7
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCC
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHN 39 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 39 (335)
.+|+|.|.||.|.+|+.+++.|.+.||+|.+.+|...
T Consensus 8 ~~~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~~ 44 (152)
T d2pv7a2 8 DIHKIVIVGGYGKLGGLFARYLRASGYPISILDREDW 44 (152)
T ss_dssp TCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCG
T ss_pred CCCeEEEEcCCCHHHHHHHHHHHHcCCCcEecccccc
Confidence 4689999999999999999999999999999988543
|
| >d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase species: Arthrobacter, strain 1c [TaxId: 1663]
Probab=97.33 E-value=0.00028 Score=54.80 Aligned_cols=79 Identities=16% Similarity=0.052 Sum_probs=48.9
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcC-CccccceeEEEccCCCHHHHHHHHhcCCC
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAG-PELAKKLEFHVGDLRNKDDLDKLFSSQKF 82 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~ 82 (335)
+|++.|.|+ |-+|..++..|.++|++|.+++|++.... .+.+... ....+.............+..+.++ ..
T Consensus 1 sk~iaIiGa-G~~G~~~A~~l~~~G~~V~~~~r~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~--~a 73 (184)
T d1bg6a2 1 SKTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQRIK----EIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVK--DA 73 (184)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHH----HHHHHTSEEEESSSCCEEECCSEEESCHHHHHT--TC
T ss_pred CCEEEEECc-cHHHHHHHHHHHHCCCEEEEEECCHHHHH----HHHHcCCCchhhhhhhhhhhhhhhhhhhHhHhc--CC
Confidence 489999998 99999999999999999999998644322 2222110 0000111222211111223566776 78
Q ss_pred CEEEEcc
Q 019795 83 EAVIHFG 89 (335)
Q Consensus 83 d~vi~~a 89 (335)
|+||-+.
T Consensus 74 D~iii~v 80 (184)
T d1bg6a2 74 DVILIVV 80 (184)
T ss_dssp SEEEECS
T ss_pred CEEEEEE
Confidence 9999753
|
| >d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: CoaB-like family: CoaB-like domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) species: Escherichia coli [TaxId: 562]
Probab=97.33 E-value=0.00042 Score=55.73 Aligned_cols=76 Identities=17% Similarity=0.158 Sum_probs=52.5
Q ss_pred CCCCeEEEEcC----------------CChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEc
Q 019795 2 ASEKNILVTGG----------------AGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVG 65 (335)
Q Consensus 2 ~~~~~vlItGa----------------tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 65 (335)
+++|+||||+| ||-+|.+|++.+..+|++|+++.-..... .+..+..+..
T Consensus 4 l~g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~Ga~V~li~g~~~~~--------------~p~~~~~~~~ 69 (223)
T d1u7za_ 4 LKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSLP--------------TPPFVKRVDV 69 (223)
T ss_dssp TTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCCC--------------CCTTEEEEEC
T ss_pred cCCCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcCCchhhhhcccccC--------------ccccccccee
Confidence 57899999975 78999999999999999999987533211 1234555543
Q ss_pred cCCCHHHHHHHHhc--CCCCEEEEcccccc
Q 019795 66 DLRNKDDLDKLFSS--QKFEAVIHFGALKA 93 (335)
Q Consensus 66 Dl~d~~~~~~~~~~--~~~d~vi~~a~~~~ 93 (335)
...+++.+.+.. ...|++|++|++..
T Consensus 70 --~t~~~m~~~~~~~~~~~D~~i~aAAvsD 97 (223)
T d1u7za_ 70 --MTALEMEAAVNASVQQQNIFIGCAAVAD 97 (223)
T ss_dssp --CSHHHHHHHHHHHGGGCSEEEECCBCCS
T ss_pred --hhhHHHHHHHHhhhccceeEeeeechhh
Confidence 344444333321 26899999999853
|
| >d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Escherichia coli [TaxId: 562]
Probab=97.33 E-value=0.00022 Score=55.28 Aligned_cols=77 Identities=13% Similarity=0.111 Sum_probs=54.1
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCH---HHHHHHHhc
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNK---DDLDKLFSS 79 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~---~~~~~~~~~ 79 (335)
++.+|+|+||+|.+|..+++.+...|++|+++++++.+. +.++++.. . .. .|-.++ +++.++.+.
T Consensus 28 ~g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~----~~~~~lGa-----~-~v--i~~~~~d~~~~v~~~t~g 95 (179)
T d1qora2 28 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKA----QSALKAGA-----W-QV--INYREEDLVERLKEITGG 95 (179)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHH----HHHHHHTC-----S-EE--EETTTSCHHHHHHHHTTT
T ss_pred CCCEEEEEccccccchHHHHHHHHhCCeEeecccchHHH----HHHHhcCC-----e-EE--EECCCCCHHHHHHHHhCC
Confidence 467999999999999999999999999999998865443 22333221 1 12 244443 455555555
Q ss_pred CCCCEEEEcccc
Q 019795 80 QKFEAVIHFGAL 91 (335)
Q Consensus 80 ~~~d~vi~~a~~ 91 (335)
.++|+|+.+.+.
T Consensus 96 ~g~d~v~d~~g~ 107 (179)
T d1qora2 96 KKVRVVYDSVGR 107 (179)
T ss_dssp CCEEEEEECSCG
T ss_pred CCeEEEEeCccH
Confidence 689999998764
|
| >d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD species: Escherichia coli [TaxId: 562]
Probab=97.33 E-value=0.00068 Score=46.35 Aligned_cols=73 Identities=21% Similarity=0.382 Sum_probs=50.0
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCC
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQK 81 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~ 81 (335)
+++|+|+|.|. |-.|..+++.|.++|++|++.+.+..... .+.+. ..+.+..... +.. .++ .
T Consensus 3 ~~~K~v~ViGl-G~sG~s~a~~L~~~g~~v~~~D~~~~~~~--~~~~~--------~~~~~~~~~~-~~~----~~~--~ 64 (93)
T d2jfga1 3 YQGKNVVIIGL-GLTGLSCVDFFLARGVTPRVMDTRMTPPG--LDKLP--------EAVERHTGSL-NDE----WLM--A 64 (93)
T ss_dssp CTTCCEEEECC-SHHHHHHHHHHHHTTCCCEEEESSSSCTT--GGGSC--------TTSCEEESBC-CHH----HHH--H
T ss_pred cCCCEEEEEeE-CHHHHHHHHHHHHCCCEEEEeeCCcCchh--HHHHh--------hccceeeccc-chh----hhc--c
Confidence 47899999998 88999999999999999999997654321 12221 2344444443 222 234 5
Q ss_pred CCEEEEccccc
Q 019795 82 FEAVIHFGALK 92 (335)
Q Consensus 82 ~d~vi~~a~~~ 92 (335)
+|.||-.-|++
T Consensus 65 ~d~vi~SPGi~ 75 (93)
T d2jfga1 65 ADLIVASPGIA 75 (93)
T ss_dssp CSEEEECTTSC
T ss_pred CCEEEECCCCC
Confidence 69999866653
|
| >d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative enoyl reductase domain of polyketide synthase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=97.30 E-value=0.00013 Score=56.85 Aligned_cols=77 Identities=17% Similarity=0.220 Sum_probs=52.5
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCH---HHHHHHHhc
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNK---DDLDKLFSS 79 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~---~~~~~~~~~ 79 (335)
++.+|||+||+|.+|..+++.+...|++|+++++++++ .+.+++.. ...+ .|-.++ +.+.++...
T Consensus 25 ~g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~~~----~~~l~~~G-------a~~v-i~~~~~~~~~~v~~~t~~ 92 (183)
T d1pqwa_ 25 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAK----REMLSRLG-------VEYV-GDSRSVDFADEILELTDG 92 (183)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHH----HHHHHTTC-------CSEE-EETTCSTHHHHHHHHTTT
T ss_pred CCCEEEEECCCCCcccccchhhccccccceeeeccccc----cccccccc-------cccc-ccCCccCHHHHHHHHhCC
Confidence 46789999999999999999998889999999875432 23333221 1111 233443 444555444
Q ss_pred CCCCEEEEcccc
Q 019795 80 QKFEAVIHFGAL 91 (335)
Q Consensus 80 ~~~d~vi~~a~~ 91 (335)
.++|+|+.+.+.
T Consensus 93 ~g~d~v~d~~g~ 104 (183)
T d1pqwa_ 93 YGVDVVLNSLAG 104 (183)
T ss_dssp CCEEEEEECCCT
T ss_pred CCEEEEEecccc
Confidence 589999998774
|
| >d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]
Probab=97.30 E-value=0.00039 Score=53.36 Aligned_cols=78 Identities=22% Similarity=0.149 Sum_probs=50.3
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEcc--CCCHHHHHHHHhc-
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGD--LRNKDDLDKLFSS- 79 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D--l~d~~~~~~~~~~- 79 (335)
.+.+|+|+| +|.+|...++.+...|++|+++++++.+.+.+ ++.. ... .+..| -.+..++.+.+..
T Consensus 26 ~g~~vlV~G-~G~vG~~~~~~ak~~Ga~vi~v~~~~~r~~~a----~~~g-----a~~-~~~~~~~~~~~~~~~~~~~~~ 94 (170)
T d1e3ja2 26 LGTTVLVIG-AGPIGLVSVLAAKAYGAFVVCTARSPRRLEVA----KNCG-----ADV-TLVVDPAKEEESSIIERIRSA 94 (170)
T ss_dssp TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH----HHTT-----CSE-EEECCTTTSCHHHHHHHHHHH
T ss_pred CCCEEEEEc-ccccchhhHhhHhhhcccccccchHHHHHHHH----HHcC-----CcE-EEeccccccccchhhhhhhcc
Confidence 467899998 59999999999988999999999865443222 2211 111 22222 2334444444432
Q ss_pred --CCCCEEEEcccc
Q 019795 80 --QKFEAVIHFGAL 91 (335)
Q Consensus 80 --~~~d~vi~~a~~ 91 (335)
.++|+||.+++.
T Consensus 95 ~g~g~D~vid~~g~ 108 (170)
T d1e3ja2 95 IGDLPNVTIDCSGN 108 (170)
T ss_dssp SSSCCSEEEECSCC
T ss_pred cccCCceeeecCCC
Confidence 479999999876
|
| >d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=97.26 E-value=0.0011 Score=50.02 Aligned_cols=114 Identities=21% Similarity=0.219 Sum_probs=67.0
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhCCC-------eEEEEecCCCCchhhHHhh----hhhcCCccccceeEEEccCCCHHH
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQGGF-------KVVLIDNLHNSVPEAVDRV----KDLAGPELAKKLEFHVGDLRNKDD 72 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~g~-------~V~~~~r~~~~~~~~~~~~----~~~~~~~~~~~i~~~~~Dl~d~~~ 72 (335)
.++|.|+||+|.+|++++..|+..+. +++.++.. ......+.+ .+... .....+.. .+ +
T Consensus 3 p~KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~--~~~~~~~~l~~~~~~~~~----~~~~~~~~--~~--~ 72 (154)
T d5mdha1 3 PIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDIT--PMMGVLDGVLMELQDCAL----PLLKDVIA--TD--K 72 (154)
T ss_dssp CEEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCG--GGHHHHHHHHHHHHHTCC----TTEEEEEE--ES--C
T ss_pred ceEEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCc--cchhhhhhhhhhhccccc----cccccccc--Cc--c
Confidence 46899999999999999999986531 34444432 222222222 11111 11111111 11 1
Q ss_pred HHHHHhcCCCCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHc-CCC-EEEEec
Q 019795 73 LDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKY-NCK-KLVFSS 131 (335)
Q Consensus 73 ~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~-~~~-~~v~~S 131 (335)
..+.++ +.|+||-+||.+... .+.-+..++.|+.-...+.+.+.+. +.. .++.+|
T Consensus 73 ~~~~~~--~~dvVVitag~~~~~--g~sr~dll~~N~~i~k~~~~~i~k~a~~~~~iivvs 129 (154)
T d5mdha1 73 EEIAFK--DLDVAILVGSMPRRD--GMERKDLLKANVKIFKCQGAALDKYAKKSVKVIVVG 129 (154)
T ss_dssp HHHHTT--TCSEEEECCSCCCCT--TCCTTTTHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred cccccC--CceEEEEecccCCCC--CCchhHHHHHhHHHHHHHHHHHHhhCCCceEEEEec
Confidence 234555 789999999985432 2333367888999999999988775 433 344555
|
| >d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Rck domain from putative potassium channel Kch species: Escherichia coli [TaxId: 562]
Probab=97.16 E-value=0.00099 Score=50.06 Aligned_cols=76 Identities=21% Similarity=0.302 Sum_probs=56.1
Q ss_pred CeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCCCE
Q 019795 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKFEA 84 (335)
Q Consensus 5 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~d~ 84 (335)
..++|.|. |-+|..+++.|.+.|++|++++.++.........+. ..++.++.+|.+|++.++++-- ..++.
T Consensus 4 nHiII~G~-g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~~~~-------~~~~~vi~Gd~~d~~~L~~a~i-~~a~~ 74 (153)
T d1id1a_ 4 DHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRL-------GDNADVIPGDSNDSSVLKKAGI-DRCRA 74 (153)
T ss_dssp SCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHH-------CTTCEEEESCTTSHHHHHHHTT-TTCSE
T ss_pred CEEEEECC-CHHHHHHHHHHHHcCCCEEEEeccchhHHHHHHHhh-------cCCcEEEEccCcchHHHHHhcc-ccCCE
Confidence 46899998 999999999999999999999875443222222221 1578999999999987766432 36788
Q ss_pred EEEcc
Q 019795 85 VIHFG 89 (335)
Q Consensus 85 vi~~a 89 (335)
||-+.
T Consensus 75 vi~~~ 79 (153)
T d1id1a_ 75 ILALS 79 (153)
T ss_dssp EEECS
T ss_pred EEEcc
Confidence 88653
|
| >d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Escherichia coli [TaxId: 562]
Probab=97.16 E-value=0.00032 Score=54.00 Aligned_cols=75 Identities=15% Similarity=0.161 Sum_probs=50.8
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCC
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQK 81 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~ 81 (335)
.++|+|+|.|+ |+.+++++..|.+.|.+|+++.|+..+.....+.+... ..+.. .+..+. ....
T Consensus 16 ~~~k~vlIlGa-GGaarai~~al~~~g~~i~I~nRt~~ka~~l~~~~~~~------~~~~~--~~~~~~-------~~~~ 79 (170)
T d1nyta1 16 RPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHT------GSIQA--LSMDEL-------EGHE 79 (170)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGG------SSEEE--CCSGGG-------TTCC
T ss_pred CCCCEEEEECC-cHHHHHHHHHhcccceEEEeccchHHHHHHHHHHHhhc------ccccc--cccccc-------cccc
Confidence 36799999997 89999999999999999999999765554444433321 12222 222221 1236
Q ss_pred CCEEEEccccc
Q 019795 82 FEAVIHFGALK 92 (335)
Q Consensus 82 ~d~vi~~a~~~ 92 (335)
+|+|||+....
T Consensus 80 ~dliIN~Tp~G 90 (170)
T d1nyta1 80 FDLIINATSSG 90 (170)
T ss_dssp CSEEEECCSCG
T ss_pred cceeecccccC
Confidence 89999986653
|
| >d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: 2,4-dienoyl-CoA reductase species: Yeast (Candida tropicalis) [TaxId: 5482]
Probab=97.09 E-value=0.00035 Score=54.75 Aligned_cols=83 Identities=12% Similarity=0.157 Sum_probs=53.2
Q ss_pred CCCeEEE-EcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEc---cCCCH-HHHHHHH
Q 019795 3 SEKNILV-TGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVG---DLRNK-DDLDKLF 77 (335)
Q Consensus 3 ~~~~vlI-tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~---Dl~d~-~~~~~~~ 77 (335)
.+.+++| +||+|.+|...++.....|.+|+++.+++...++..+.++++.. . ..+.- |..+. +.+.++.
T Consensus 28 ~g~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~~~~~~~~~lGa----d--~vi~~~~~~~~~~~~~v~~~~ 101 (189)
T d1gu7a2 28 PGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGA----T--QVITEDQNNSREFGPTIKEWI 101 (189)
T ss_dssp TTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTC----S--EEEEHHHHHCGGGHHHHHHHH
T ss_pred CCCEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEecccccchHHhhhhhccc----c--EEEeccccchhHHHHHHHHHH
Confidence 3456666 69999999999999988899999999887776666555555432 1 12222 21111 2233333
Q ss_pred h--cCCCCEEEEcccc
Q 019795 78 S--SQKFEAVIHFGAL 91 (335)
Q Consensus 78 ~--~~~~d~vi~~a~~ 91 (335)
. ..++|+|+.+.+.
T Consensus 102 ~~~g~~vdvv~D~vg~ 117 (189)
T d1gu7a2 102 KQSGGEAKLALNCVGG 117 (189)
T ss_dssp HHHTCCEEEEEESSCH
T ss_pred hhccCCceEEEECCCc
Confidence 2 2468999987653
|
| >d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Haemophilus influenzae [TaxId: 727]
Probab=97.07 E-value=0.00071 Score=52.00 Aligned_cols=75 Identities=20% Similarity=0.271 Sum_probs=52.3
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCC
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQK 81 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~ 81 (335)
.++|+|+|.|+ |+.+++++..|.+.+.+|+++.|+..+.....+.+... ..+..+..|-.+ + ..
T Consensus 16 ~~~k~vlIlGa-GGaarai~~aL~~~~~~i~I~nR~~~~a~~l~~~~~~~------~~~~~~~~~~~~-------~--~~ 79 (171)
T d1p77a1 16 RPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPY------GNIQAVSMDSIP-------L--QT 79 (171)
T ss_dssp CTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGG------SCEEEEEGGGCC-------C--SC
T ss_pred CCCCEEEEECC-cHHHHHHHHHHcccCceeeeccchHHHHHHHHHHHhhc------cccchhhhcccc-------c--cc
Confidence 36789999997 88899999999998889999999865555554444322 234444433221 2 26
Q ss_pred CCEEEEccccc
Q 019795 82 FEAVIHFGALK 92 (335)
Q Consensus 82 ~d~vi~~a~~~ 92 (335)
+|+|||+....
T Consensus 80 ~diiIN~tp~g 90 (171)
T d1p77a1 80 YDLVINATSAG 90 (171)
T ss_dssp CSEEEECCCC-
T ss_pred cceeeeccccc
Confidence 89999987654
|
| >d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramate-alanine ligase MurC species: Haemophilus influenzae [TaxId: 727]
Probab=97.06 E-value=0.003 Score=43.20 Aligned_cols=73 Identities=21% Similarity=0.247 Sum_probs=49.4
Q ss_pred CCCCCeEEEEcCCChhh-HHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhc
Q 019795 1 MASEKNILVTGGAGFIG-THCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSS 79 (335)
Q Consensus 1 ~~~~~~vlItGatG~iG-~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~ 79 (335)
|.+.|++.+.|- |.+| ++||+.|.++|++|.+.|+.... ..+.+.+ .++.+..++- ++ -+.
T Consensus 5 ~~~~~~ihfiGi-gG~GMs~LA~~L~~~G~~VsGSD~~~~~---~~~~L~~-------~Gi~v~~g~~--~~----~i~- 66 (96)
T d1p3da1 5 MRRVQQIHFIGI-GGAGMSGIAEILLNEGYQISGSDIADGV---VTQRLAQ-------AGAKIYIGHA--EE----HIE- 66 (96)
T ss_dssp CTTCCEEEEETT-TSTTHHHHHHHHHHHTCEEEEEESCCSH---HHHHHHH-------TTCEEEESCC--GG----GGT-
T ss_pred chhCCEEEEEEE-CHHHHHHHHHHHHhCCCEEEEEeCCCCh---hhhHHHH-------CCCeEEECCc--cc----cCC-
Confidence 556789999997 5566 77899999999999999986432 2333433 3455544332 22 123
Q ss_pred CCCCEEEEccccc
Q 019795 80 QKFEAVIHFGALK 92 (335)
Q Consensus 80 ~~~d~vi~~a~~~ 92 (335)
++|.||...|+.
T Consensus 67 -~~d~vV~S~AI~ 78 (96)
T d1p3da1 67 -GASVVVVSSAIK 78 (96)
T ss_dssp -TCSEEEECTTSC
T ss_pred -CCCEEEECCCcC
Confidence 679999887774
|
| >d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhfP species: Bacillus subtilis [TaxId: 1423]
Probab=97.01 E-value=8e-05 Score=57.30 Aligned_cols=39 Identities=26% Similarity=0.377 Sum_probs=34.1
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCch
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVP 42 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~ 42 (335)
+.+|||+||+|.+|...++.....|++|+++++++.+.+
T Consensus 24 ~~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~~ 62 (167)
T d1tt7a2 24 KGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAAD 62 (167)
T ss_dssp GCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHH
T ss_pred CCEEEEeCCcchHHHHHHHHHHHcCCceEEEecCHHHHH
Confidence 457999999999999999998888999999999766543
|
| >d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=96.98 E-value=0.00085 Score=51.10 Aligned_cols=34 Identities=26% Similarity=0.327 Sum_probs=30.4
Q ss_pred CeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCC
Q 019795 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHN 39 (335)
Q Consensus 5 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 39 (335)
|+|.|.|. |.+|+.+++.|.+.|++|++.+|++.
T Consensus 1 MkI~iIG~-G~mG~~lA~~l~~~g~~V~~~d~~~~ 34 (165)
T d2f1ka2 1 MKIGVVGL-GLIGASLAGDLRRRGHYLIGVSRQQS 34 (165)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CEEEEEee-cHHHHHHHHHHHHCCCEEEEEECCch
Confidence 57899986 99999999999999999999998643
|
| >d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.98 E-value=0.0023 Score=48.95 Aligned_cols=78 Identities=22% Similarity=0.208 Sum_probs=50.9
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHh---
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGF-KVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFS--- 78 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~--- 78 (335)
++.+|+|.|+ |.+|...++.+...|+ +|+++++++.+...+ ++. + . -..+..+-.+..+..+.+.
T Consensus 26 ~gd~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a----~~~-G----a-~~~~~~~~~~~~~~~~~~~~~~ 94 (171)
T d1pl8a2 26 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKA----KEI-G----A-DLVLQISKESPQEIARKVEGQL 94 (171)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHH----HHT-T----C-SEEEECSSCCHHHHHHHHHHHH
T ss_pred CCCEEEEECC-CccHHHHHHHHHHcCCceEEeccCCHHHHHHH----HHh-C----C-cccccccccccccccccccccC
Confidence 4678999987 9999999999999998 799998764433221 121 1 1 1233333344444444433
Q ss_pred cCCCCEEEEcccc
Q 019795 79 SQKFEAVIHFGAL 91 (335)
Q Consensus 79 ~~~~d~vi~~a~~ 91 (335)
..++|+||.+.+.
T Consensus 95 g~g~Dvvid~~G~ 107 (171)
T d1pl8a2 95 GCKPEVTIECTGA 107 (171)
T ss_dssp TSCCSEEEECSCC
T ss_pred CCCceEEEeccCC
Confidence 2479999998876
|
| >d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde dehydrogenase {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Vibrio cholerae [TaxId: 666]
Probab=96.96 E-value=0.0012 Score=49.05 Aligned_cols=32 Identities=13% Similarity=0.301 Sum_probs=25.0
Q ss_pred CeEEEEcCCChhhHHHHHHHHhCC----CeEEEEec
Q 019795 5 KNILVTGGAGFIGTHCALQLLQGG----FKVVLIDN 36 (335)
Q Consensus 5 ~~vlItGatG~iG~~l~~~L~~~g----~~V~~~~r 36 (335)
|+|.|.||||++|+.|++.|++.. .++..++.
T Consensus 1 mKVaIiGATGyvG~eLi~lLl~~~~~p~~~i~~~ss 36 (147)
T d1mb4a1 1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFST 36 (147)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEES
T ss_pred CEEEEECCccHHHHHHHHHHHhcCCCCceEEEEecc
Confidence 579999999999999999887642 35555543
|
| >d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Cinnamyl alcohol dehydrogenase, ADH6 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=96.94 E-value=0.00075 Score=51.65 Aligned_cols=74 Identities=18% Similarity=0.200 Sum_probs=48.8
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCC-CHHHHHHHHhcCC
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLR-NKDDLDKLFSSQK 81 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~-d~~~~~~~~~~~~ 81 (335)
++.+|+|.|+ |.+|...++.+...|++|+++++++.+.+.. .++. .. .++ |-. +.+..+...+ +
T Consensus 27 ~g~~vlI~Ga-G~vG~~a~q~ak~~G~~vi~~~~~~~k~~~a-~~lG--------a~-~~i--~~~~~~~~~~~~~~--~ 91 (168)
T d1piwa2 27 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDA-MKMG--------AD-HYI--ATLEEGDWGEKYFD--T 91 (168)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHH-HHHT--------CS-EEE--EGGGTSCHHHHSCS--C
T ss_pred CCCEEEEECC-CCcchhHHHHhhhccccccccccchhHHHHh-hccC--------Cc-EEe--eccchHHHHHhhhc--c
Confidence 4678999997 9999999988888899999999987665432 2221 11 122 222 2222333333 7
Q ss_pred CCEEEEcccc
Q 019795 82 FEAVIHFGAL 91 (335)
Q Consensus 82 ~d~vi~~a~~ 91 (335)
+|+++.+.+.
T Consensus 92 ~d~vi~~~~~ 101 (168)
T d1piwa2 92 FDLIVVCASS 101 (168)
T ss_dssp EEEEEECCSC
T ss_pred cceEEEEecC
Confidence 8999988665
|
| >d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Fatty oxidation complex alpha subunit, middle domain species: Pseudomonas fragi [TaxId: 296]
Probab=96.93 E-value=0.00042 Score=54.13 Aligned_cols=44 Identities=20% Similarity=0.307 Sum_probs=36.4
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhh
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRV 48 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~ 48 (335)
-++|.|.|+ |.+|+.++..++..|++|+++++++.......+++
T Consensus 4 I~~vaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~~~~~i 47 (186)
T d1wdka3 4 VKQAAVLGA-GIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEA 47 (186)
T ss_dssp CSSEEEECC-HHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHH
T ss_pred CCEEEEECc-CHHHHHHHHHHHhCCCeEEEEECCHHHHhhhhhhh
Confidence 478999998 99999999999999999999999766544444433
|
| >d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative zinc-binding alcohol dehydrogenase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.93 E-value=0.0008 Score=52.50 Aligned_cols=75 Identities=13% Similarity=0.066 Sum_probs=45.3
Q ss_pred CeEEEEcCCChhhHHHHHHHHhCCCeEEE-EecCCCCchhhHHhhhhhcCCccccceeEEEccCCC--H-HHHHHHHhcC
Q 019795 5 KNILVTGGAGFIGTHCALQLLQGGFKVVL-IDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRN--K-DDLDKLFSSQ 80 (335)
Q Consensus 5 ~~vlItGatG~iG~~l~~~L~~~g~~V~~-~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d--~-~~~~~~~~~~ 80 (335)
.+|||+||+|.+|+..++.+...|.++++ ++.++.+. ..+.+..+ .- ...|..+ . +.++++. ..
T Consensus 32 etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~----~~l~~~~g-----ad--~vi~~~~~~~~~~~~~~~-~~ 99 (187)
T d1vj1a2 32 QTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKC----LFLTSELG-----FD--AAVNYKTGNVAEQLREAC-PG 99 (187)
T ss_dssp CEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHH----HHHHHHSC-----CS--EEEETTSSCHHHHHHHHC-TT
T ss_pred CEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHH----hhhhhccc-----ce--EEeeccchhHHHHHHHHh-cc
Confidence 67999999999999999999889986554 44432222 22221111 11 2223333 2 2333333 35
Q ss_pred CCCEEEEcccc
Q 019795 81 KFEAVIHFGAL 91 (335)
Q Consensus 81 ~~d~vi~~a~~ 91 (335)
++|+|+.+.|-
T Consensus 100 GvDvv~D~vGg 110 (187)
T d1vj1a2 100 GVDVYFDNVGG 110 (187)
T ss_dssp CEEEEEESSCH
T ss_pred CceEEEecCCc
Confidence 79999988763
|
| >d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Ketopantoate reductase PanE species: Escherichia coli [TaxId: 562]
Probab=96.91 E-value=0.00055 Score=52.09 Aligned_cols=36 Identities=22% Similarity=0.190 Sum_probs=33.0
Q ss_pred CeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCc
Q 019795 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSV 41 (335)
Q Consensus 5 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~ 41 (335)
|+|+|.|+ |.+|+.++..|++.|++|++++|++...
T Consensus 1 MkI~IiGa-G~iG~~~a~~L~~~G~~V~~~~r~~~~~ 36 (167)
T d1ks9a2 1 MKITVLGC-GALGQLWLTALCKQGHEVQGWLRVPQPY 36 (167)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCSE
T ss_pred CEEEEECc-CHHHHHHHHHHHHCCCceEEEEcCHHHh
Confidence 68999998 9999999999999999999999987643
|
| >d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=96.88 E-value=0.0034 Score=47.52 Aligned_cols=36 Identities=28% Similarity=0.474 Sum_probs=32.1
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCC
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNS 40 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~ 40 (335)
|++|.+.|- |-+|+.+++.|+++||+|.+.+|++..
T Consensus 1 M~kIg~IGl-G~MG~~iA~~L~~~g~~v~~~d~~~~~ 36 (162)
T d3cuma2 1 MKQIAFIGL-GHMGAPMATNLLKAGYLLNVFDLVQSA 36 (162)
T ss_dssp CCEEEEECC-STTHHHHHHHHHHTTCEEEEECSSHHH
T ss_pred CCEEEEEEE-HHHHHHHHHHHHHCCCeEEEEECchhh
Confidence 578999985 999999999999999999999987544
|
| >d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Usg-1 protein homolog PA3116 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=96.81 E-value=0.0014 Score=48.68 Aligned_cols=33 Identities=21% Similarity=0.305 Sum_probs=26.5
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhCC---CeEEEEec
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQGG---FKVVLIDN 36 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~g---~~V~~~~r 36 (335)
.++|.|.||||++|+.|++.|.+.+ .++..+..
T Consensus 2 ~mnVaIvGATGyvG~eli~lL~~~~hP~~~l~~~~s 37 (144)
T d2hjsa1 2 PLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLAS 37 (144)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEEC
T ss_pred CCEEEEECCCCHHHHHHHHHHHhcCCCceEEEEEee
Confidence 3689999999999999999998654 45666544
|
| >d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: GDP-mannose 6-dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=96.77 E-value=0.00047 Score=54.64 Aligned_cols=32 Identities=31% Similarity=0.470 Sum_probs=29.2
Q ss_pred CeEEEEcCCChhhHHHHHHHHhCCCeEEEEecC
Q 019795 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNL 37 (335)
Q Consensus 5 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~ 37 (335)
|+|.|.|. |++|..++..|++.|++|++++.+
T Consensus 1 MkI~ViGl-G~vGl~~a~~la~~g~~V~g~D~n 32 (202)
T d1mv8a2 1 MRISIFGL-GYVGAVCAGCLSARGHEVIGVDVS 32 (202)
T ss_dssp CEEEEECC-STTHHHHHHHHHHTTCEEEEECSC
T ss_pred CEEEEECC-CHhHHHHHHHHHhCCCcEEEEeCC
Confidence 57899985 999999999999999999999875
|
| >d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Short chain L-3-hydroxyacyl CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.75 E-value=0.00059 Score=53.53 Aligned_cols=46 Identities=26% Similarity=0.434 Sum_probs=38.1
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhh
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRV 48 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~ 48 (335)
|+-|+|.|.|+ |.+|+.++..++..|++|++.++++.......+.+
T Consensus 2 ~~IkkvaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~a~~~i 47 (192)
T d1f0ya2 2 IIVKHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGI 47 (192)
T ss_dssp CCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH
T ss_pred ceeEEEEEECc-CHHHHHHHHHHHhCCCcEEEEECChHHHHHHHhhH
Confidence 44689999998 99999999999999999999999876554444443
|
| >d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Probab=96.75 E-value=0.00046 Score=53.41 Aligned_cols=37 Identities=27% Similarity=0.455 Sum_probs=33.3
Q ss_pred CeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCc
Q 019795 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSV 41 (335)
Q Consensus 5 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~ 41 (335)
.+|||+||+|.+|...++.....|++|+++++++.+.
T Consensus 33 ~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k~ 69 (177)
T d1o89a2 33 GEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTH 69 (177)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGH
T ss_pred CcEEEEEccccchHHHHHHHHHcCCCeEEEecchhHH
Confidence 4899999999999999999999999999999876553
|
| >d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YahK species: Escherichia coli [TaxId: 562]
Probab=96.74 E-value=0.002 Score=49.11 Aligned_cols=75 Identities=20% Similarity=0.212 Sum_probs=51.5
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCC
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKF 82 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~ 82 (335)
.+.+|+|.|+ |.+|...++.+...|++++++++++.+.. ..+++ .. . ...|..+.+......+ ++
T Consensus 30 ~G~~VlI~Ga-G~vG~~a~qlak~~Ga~~i~~~~~~~~~~-~a~~l---Ga-------d-~~i~~~~~~~~~~~~~--~~ 94 (168)
T d1uufa2 30 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKRE-AAKAL---GA-------D-EVVNSRNADEMAAHLK--SF 94 (168)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHH-HHHHH---TC-------S-EEEETTCHHHHHTTTT--CE
T ss_pred CCCEEEEecc-chHHHHHHHHhhcccccchhhccchhHHH-HHhcc---CC-------c-EEEECchhhHHHHhcC--CC
Confidence 4678999996 89999999999889999999988655432 22222 11 1 2235556555544444 79
Q ss_pred CEEEEccccc
Q 019795 83 EAVIHFGALK 92 (335)
Q Consensus 83 d~vi~~a~~~ 92 (335)
|++|.+.+..
T Consensus 95 D~vid~~g~~ 104 (168)
T d1uufa2 95 DFILNTVAAP 104 (168)
T ss_dssp EEEEECCSSC
T ss_pred ceeeeeeecc
Confidence 9999988753
|
| >d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein TM0436 species: Thermotoga maritima [TaxId: 2336]
Probab=96.71 E-value=0.0021 Score=49.68 Aligned_cols=78 Identities=10% Similarity=0.132 Sum_probs=49.3
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHH----HHHHH
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGF-KVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDD----LDKLF 77 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~----~~~~~ 77 (335)
++.+|||+|+ |.+|...++.+...|+ +|+++++++.+.+ ..++.. . -..+...-.+..+ +.++.
T Consensus 28 ~G~~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~----~a~~lG-----a-~~vi~~~~~~~~~~~~~i~~~~ 96 (182)
T d1vj0a2 28 AGKTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSPNRLK----LAEEIG-----A-DLTLNRRETSVEERRKAIMDIT 96 (182)
T ss_dssp BTCEEEEECC-SHHHHHHHHHHHHTTBSEEEEEESCHHHHH----HHHHTT-----C-SEEEETTTSCHHHHHHHHHHHT
T ss_pred CCCEEEEECC-Cccchhheeccccccccccccccccccccc----cccccc-----c-eEEEeccccchHHHHHHHHHhh
Confidence 4678999997 8999999999999997 7999988654332 222211 1 1222221122222 33344
Q ss_pred hcCCCCEEEEcccc
Q 019795 78 SSQKFEAVIHFGAL 91 (335)
Q Consensus 78 ~~~~~d~vi~~a~~ 91 (335)
...++|+||.+.+.
T Consensus 97 ~~~g~Dvvid~vG~ 110 (182)
T d1vj0a2 97 HGRGADFILEATGD 110 (182)
T ss_dssp TTSCEEEEEECSSC
T ss_pred CCCCceEEeecCCc
Confidence 44579999998875
|
| >d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC species: Thermotoga maritima [TaxId: 2336]
Probab=96.64 E-value=0.0016 Score=50.08 Aligned_cols=32 Identities=16% Similarity=0.215 Sum_probs=26.6
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhC-CCeEEEEe
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQG-GFKVVLID 35 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~-g~~V~~~~ 35 (335)
|++|.|.||||++|+.|++.|.+. ..++..+.
T Consensus 1 MikVaIvGATGyvG~eLirlL~~HP~~ei~~l~ 33 (176)
T d1vkna1 1 MIRAGIIGATGYTGLELVRLLKNHPEAKITYLS 33 (176)
T ss_dssp CEEEEEESTTSHHHHHHHHHHHHCTTEEEEEEE
T ss_pred CeEEEEECCCcHHHHHHHHHHHhCCCceEEEee
Confidence 569999999999999999999875 35666554
|
| >d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent ferredoxin reductase, BphA4 species: Pseudomonas sp., KKS102 [TaxId: 306]
Probab=96.57 E-value=0.0021 Score=46.17 Aligned_cols=37 Identities=27% Similarity=0.490 Sum_probs=33.3
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCC
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNS 40 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~ 40 (335)
..++++|.|| |++|-.++..|.+.|.+|+++.+.+.-
T Consensus 29 ~~~~vvIIGg-G~iG~E~A~~l~~~g~~Vtli~~~~~~ 65 (121)
T d1d7ya2 29 PQSRLLIVGG-GVIGLELAATARTAGVHVSLVETQPRL 65 (121)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSST
T ss_pred cCCeEEEECc-chhHHHHHHHhhcccceEEEEeecccc
Confidence 4689999998 999999999999999999999987653
|
| >d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=96.54 E-value=0.0024 Score=45.86 Aligned_cols=35 Identities=26% Similarity=0.396 Sum_probs=31.8
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCC
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHN 39 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 39 (335)
.++++|.|| |+||-.++..|.+.|.+|+++.+.+.
T Consensus 23 p~~~vIiG~-G~ig~E~A~~l~~lG~~Vtii~~~~~ 57 (122)
T d1v59a2 23 PKRLTIIGG-GIIGLEMGSVYSRLGSKVTVVEFQPQ 57 (122)
T ss_dssp CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CCeEEEECC-CchHHHHHHHHHhhCcceeEEEeccc
Confidence 378999998 99999999999999999999988654
|
| >d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Salmonella typhimurium [TaxId: 90371]
Probab=96.53 E-value=0.0057 Score=46.12 Aligned_cols=37 Identities=22% Similarity=0.430 Sum_probs=32.0
Q ss_pred CeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCch
Q 019795 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVP 42 (335)
Q Consensus 5 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~ 42 (335)
|+|-|.|- |.+|+.+++.|+++|++|++.+|++.+..
T Consensus 1 MkIgiIGl-G~MG~~~A~~L~~~G~~V~~~d~~~~~~~ 37 (161)
T d1vpda2 1 MKVGFIGL-GIMGKPMSKNLLKAGYSLVVSDRNPEAIA 37 (161)
T ss_dssp CEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHH
T ss_pred CEEEEEeh-hHHHHHHHHHHHHCCCeEEEEeCCcchhH
Confidence 57899986 99999999999999999999998755433
|
| >d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: L-alanine dehydrogenase species: Phormidium lapideum [TaxId: 32060]
Probab=96.47 E-value=0.0048 Score=46.53 Aligned_cols=76 Identities=18% Similarity=0.322 Sum_probs=57.1
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCCC
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKFE 83 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~d 83 (335)
..+|+|.|+ |-.|..-++.....|.+|++++.+...... +..... ..++.. ..+++.+.+.+. ..|
T Consensus 32 pa~V~ViGa-GvaG~~A~~~A~~lGA~V~~~D~~~~~l~~----l~~~~~----~~~~~~---~~~~~~l~~~~~--~aD 97 (168)
T d1pjca1 32 PGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSY----LETLFG----SRVELL---YSNSAEIETAVA--EAD 97 (168)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHH----HHHHHG----GGSEEE---ECCHHHHHHHHH--TCS
T ss_pred CcEEEEECC-ChHHHHHHHHHhhCCCEEEEEeCcHHHHHH----HHHhhc----ccceee---hhhhhhHHHhhc--cCc
Confidence 368999998 999999999999999999999986554433 322221 334333 456778888888 789
Q ss_pred EEEEcccccc
Q 019795 84 AVIHFGALKA 93 (335)
Q Consensus 84 ~vi~~a~~~~ 93 (335)
+||.++-++.
T Consensus 98 ivI~aalipG 107 (168)
T d1pjca1 98 LLIGAVLVPG 107 (168)
T ss_dssp EEEECCCCTT
T ss_pred EEEEeeecCC
Confidence 9999887643
|
| >d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Glycerol-3- phosphate dehydrogenase species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=96.42 E-value=0.0077 Score=46.31 Aligned_cols=78 Identities=19% Similarity=0.259 Sum_probs=49.3
Q ss_pred CeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcC-CccccceeEEEccCCCHHHHHHHHhcCCCC
Q 019795 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAG-PELAKKLEFHVGDLRNKDDLDKLFSSQKFE 83 (335)
Q Consensus 5 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~d 83 (335)
|+|.|.|+ |-.|.+++..|.++|++|.+.+|... .+..+.+.+... +.....+ -..++.-..++.++++ ..|
T Consensus 1 MkI~ViGa-G~~GtalA~~la~~g~~V~l~~r~~~--~~~~~~i~~~~~~~~~~~~~--~~~~i~~~~~~~~~~~--~ad 73 (180)
T d1txga2 1 MIVSILGA-GAMGSALSVPLVDNGNEVRIWGTEFD--TEILKSISAGREHPRLGVKL--NGVEIFWPEQLEKCLE--NAE 73 (180)
T ss_dssp CEEEEESC-CHHHHHHHHHHHHHCCEEEEECCGGG--HHHHHHHHTTCCBTTTTBCC--CSEEEECGGGHHHHHT--TCS
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCCEEEEEEeccc--HHHHHHHhhhhhhhhhcchh--ccccccccccHHHHHh--ccc
Confidence 68999998 99999999999999999999987432 222333322111 0111111 1112333456778887 789
Q ss_pred EEEEcc
Q 019795 84 AVIHFG 89 (335)
Q Consensus 84 ~vi~~a 89 (335)
+||.+-
T Consensus 74 ~Ii~av 79 (180)
T d1txga2 74 VVLLGV 79 (180)
T ss_dssp EEEECS
T ss_pred hhhccc
Confidence 998753
|
| >d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Bacterial secondary alcohol dehydrogenase species: Clostridium beijerinckii [TaxId: 1520]
Probab=96.40 E-value=0.0016 Score=50.11 Aligned_cols=79 Identities=18% Similarity=0.133 Sum_probs=50.7
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCCchhhHHhhhhhcCCccccceeEEEc-cCCCHHHHHHHHhcC
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGF-KVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVG-DLRNKDDLDKLFSSQ 80 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-Dl~d~~~~~~~~~~~ 80 (335)
++.+|+|.|+ |.+|...++.+...|+ +|+++++++.+.... .+.. -..++.. |-...+.+.++....
T Consensus 27 ~g~~VlI~Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a----~~lG------a~~~i~~~~~~~~~~v~~~t~g~ 95 (174)
T d1jqba2 27 MGSSVVVIGI-GAVGLMGIAGAKLRGAGRIIGVGSRPICVEAA----KFYG------ATDILNYKNGHIEDQVMKLTNGK 95 (174)
T ss_dssp TTCCEEEECC-SHHHHHHHHHHHTTTCSCEEEECCCHHHHHHH----HHHT------CSEEECGGGSCHHHHHHHHTTTS
T ss_pred CCCEEEEEcC-CcchhhhhhhhhcccccccccccchhhhHHHH----HhhC------ccccccccchhHHHHHHHHhhcc
Confidence 4678999986 9999999999988896 688888754432221 1211 1122222 212234556666556
Q ss_pred CCCEEEEccccc
Q 019795 81 KFEAVIHFGALK 92 (335)
Q Consensus 81 ~~d~vi~~a~~~ 92 (335)
++|+||.+++..
T Consensus 96 G~D~vid~~g~~ 107 (174)
T d1jqba2 96 GVDRVIMAGGGS 107 (174)
T ss_dssp CEEEEEECSSCT
T ss_pred CcceEEEccCCH
Confidence 799999998863
|
| >d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH peroxidase species: Enterococcus faecalis [TaxId: 1351]
Probab=96.39 E-value=0.0027 Score=45.65 Aligned_cols=36 Identities=36% Similarity=0.600 Sum_probs=32.2
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCC
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHN 39 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 39 (335)
+.|+|+|.|| |++|..++..|.+.|.+|+++.+.+.
T Consensus 29 ~~k~vvViGg-G~iG~E~A~~l~~~g~~Vtlie~~~~ 64 (123)
T d1nhpa2 29 EVNNVVVIGS-GYIGIEAAEAFAKAGKKVTVIDILDR 64 (123)
T ss_dssp TCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CCCEEEEECC-hHHHHHHHHHhhccceEEEEEEecCc
Confidence 3578999997 99999999999999999999988654
|
| >d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase-like protein HI0607 species: Haemophilus influenzae [TaxId: 727]
Probab=96.37 E-value=0.0014 Score=50.09 Aligned_cols=38 Identities=16% Similarity=0.298 Sum_probs=32.7
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCCc
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGF-KVVLIDNLHNSV 41 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~ 41 (335)
++|+|+|.|+ |+.+++++..|.+.|. +|.++.|+..+.
T Consensus 16 ~~~~vlIlGa-GGaarai~~aL~~~g~~~I~I~nR~~~ka 54 (167)
T d1npya1 16 KNAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKTG 54 (167)
T ss_dssp TTSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHHH
T ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEecccHHHH
Confidence 5789999998 9999999999999996 789998875443
|
| >d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Benzyl alcohol dehydrogenase species: Acinetobacter calcoaceticus [TaxId: 471]
Probab=96.36 E-value=0.0051 Score=47.03 Aligned_cols=77 Identities=10% Similarity=0.181 Sum_probs=45.8
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEE-EEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCH-HHHHHHHhcC
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVV-LIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNK-DDLDKLFSSQ 80 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~-~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~-~~~~~~~~~~ 80 (335)
.+.+|+|.|+ |.+|...++.+...|+.++ ++++++.+. +..+++. -..++..+-.|. +.+.++.. .
T Consensus 28 ~g~~VlI~G~-G~iG~~~~~~ak~~g~~~v~~~~~~~~k~----~~a~~~G------a~~~i~~~~~~~~~~i~~~t~-g 95 (174)
T d1f8fa2 28 PASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRL----ELAKQLG------ATHVINSKTQDPVAAIKEITD-G 95 (174)
T ss_dssp TTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHH----HHHHHHT------CSEEEETTTSCHHHHHHHHTT-S
T ss_pred CCCEEEEeCC-CHHHhhhhhcccccccceeeeeccHHHHH----HHHHHcC------CeEEEeCCCcCHHHHHHHHcC-C
Confidence 4678999997 9999999999988887655 455543222 2222221 122332222222 33344433 4
Q ss_pred CCCEEEEcccc
Q 019795 81 KFEAVIHFGAL 91 (335)
Q Consensus 81 ~~d~vi~~a~~ 91 (335)
++|+||.+.+.
T Consensus 96 g~D~vid~~G~ 106 (174)
T d1f8fa2 96 GVNFALESTGS 106 (174)
T ss_dssp CEEEEEECSCC
T ss_pred CCcEEEEcCCc
Confidence 79999998875
|
| >d2csua1 c.2.1.8 (A:1-129) Acetate-CoA ligase alpha chain, AcdA, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Acetate-CoA ligase alpha chain, AcdA, N-terminal domain species: Pyrococcus horikoshii [TaxId: 53953]
Probab=96.31 E-value=0.012 Score=42.43 Aligned_cols=88 Identities=14% Similarity=0.086 Sum_probs=57.4
Q ss_pred CCCCeEEEEcCC---ChhhHHHHHHHHhCC-CeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHH
Q 019795 2 ASEKNILVTGGA---GFIGTHCALQLLQGG-FKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLF 77 (335)
Q Consensus 2 ~~~~~vlItGat---G~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~ 77 (335)
+..++|.|.||| +..|..+.+.|.+.| ++|+.+....... .++. ..-++.| +-
T Consensus 6 f~PksIAVVGaS~~~~~~g~~v~~~L~~~~~g~v~pVnP~~~~i----------------~G~~-~y~sl~d------lp 62 (129)
T d2csua1 6 FNPKGIAVIGASNDPKKLGYEVFKNLKEYKKGKVYPVNIKEEEV----------------QGVK-AYKSVKD------IP 62 (129)
T ss_dssp TSCSEEEEETCCSCTTSHHHHHHHHHTTCCSSEEEEECSSCSEE----------------TTEE-CBSSTTS------CS
T ss_pred CCCCeEEEEccCCCCCCcHHHHHHHHHHcCCCcEEEeccCcccc----------------CCeE-eecchhh------cC
Confidence 456899999999 899999999997765 6888886432211 0111 1113332 23
Q ss_pred hcCCCCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEecc
Q 019795 78 SSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSS 132 (335)
Q Consensus 78 ~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss 132 (335)
. .+|.++-+... ..+..+++.|.+.|++.++.+|+
T Consensus 63 ~--~vDlvvi~vp~------------------~~~~~~~~~~~~~g~~~~vi~s~ 97 (129)
T d2csua1 63 D--EIDLAIIVVPK------------------RFVKDTLIQCGEKGVKGVVIITA 97 (129)
T ss_dssp S--CCSEEEECSCH------------------HHHHHHHHHHHHHTCCEEEECCC
T ss_pred C--CCceEEEecCh------------------HHhHHHHHHHHHcCCCEEEEecc
Confidence 2 68988864332 11335788888899988888876
|
| >d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Putative semialdehyde dehydrogenase species: Rice (Oryza sativa) [TaxId: 4530]
Probab=96.30 E-value=0.0028 Score=49.07 Aligned_cols=34 Identities=24% Similarity=0.456 Sum_probs=27.7
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhC-CCeEEEEe
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQG-GFKVVLID 35 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~-g~~V~~~~ 35 (335)
.++.+|.|.||||++|+.|++.|.+. ..++..+.
T Consensus 3 ~~kikVaIlGATGyvG~elirLL~~HP~~ei~~l~ 37 (183)
T d2cvoa1 3 GEEVRIAVLGASGYTGAEIVRLLANHPQFRIKVMT 37 (183)
T ss_dssp SSCEEEEEESCSSHHHHHHHHHHTTCSSEEEEEEE
T ss_pred CCccEEEEECcccHHHHHHHHHHHhCCCceEEEEe
Confidence 45678999999999999999999886 35665554
|
| >d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=96.29 E-value=0.0031 Score=44.88 Aligned_cols=35 Identities=29% Similarity=0.535 Sum_probs=31.9
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCC
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHN 39 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 39 (335)
.++++|.|| |++|..++..|.+.|.+|+++.|.+.
T Consensus 22 p~~v~IiGg-G~ig~E~A~~l~~~G~~Vtlve~~~~ 56 (117)
T d1ebda2 22 PKSLVVIGG-GYIGIELGTAYANFGTKVTILEGAGE 56 (117)
T ss_dssp CSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CCeEEEECC-CccceeeeeeecccccEEEEEEecce
Confidence 378999998 99999999999999999999988654
|
| >d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Conserved hypothetical protein MTH1747 species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]
Probab=96.25 E-value=0.0081 Score=44.72 Aligned_cols=36 Identities=19% Similarity=0.096 Sum_probs=30.6
Q ss_pred CeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCc
Q 019795 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSV 41 (335)
Q Consensus 5 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~ 41 (335)
|+|.|.|. |-+|+.+++.|+++|++|++.++.+...
T Consensus 1 MkIgiIG~-G~mG~~ia~~l~~~g~~v~~~~~~~~~~ 36 (152)
T d1i36a2 1 LRVGFIGF-GEVAQTLASRLRSRGVEVVTSLEGRSPS 36 (152)
T ss_dssp CEEEEESC-SHHHHHHHHHHHHTTCEEEECCTTCCHH
T ss_pred CEEEEEcH-HHHHHHHHHHHHHCCCeEEEEcCchhHH
Confidence 57888875 9999999999999999999888765543
|
| >d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: D-aminoacid oxidase, N-terminal domain domain: D-aminoacid oxidase, N-terminal domain species: Rhodotorula gracilis [TaxId: 5286]
Probab=96.24 E-value=0.0031 Score=51.10 Aligned_cols=34 Identities=32% Similarity=0.547 Sum_probs=31.3
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCC
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLH 38 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~ 38 (335)
.|+|+|.|| |..|...+..|+++|++|+++.|..
T Consensus 6 ~~kVvVIGa-GiaGl~~A~~L~~~G~~V~vier~~ 39 (268)
T d1c0pa1 6 QKRVVVLGS-GVIGLSSALILARKGYSVHILARDL 39 (268)
T ss_dssp SCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCcEEEECc-cHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 368999998 9999999999999999999999854
|
| >d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: 6-phosphogluconate dehydrogenase species: Sheep (Ovis orientalis aries) [TaxId: 9940]
Probab=96.23 E-value=0.024 Score=43.18 Aligned_cols=40 Identities=20% Similarity=0.341 Sum_probs=34.6
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhh
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEA 44 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~ 44 (335)
+++|-|.|- |-+|+.+++.|++.|++|++.+|++.+....
T Consensus 2 ~~nIg~IGl-G~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l 41 (176)
T d2pgda2 2 QADIALIGL-AVMGQNLILNMNDHGFVVCAFNRTVSKVDDF 41 (176)
T ss_dssp CBSEEEECC-SHHHHHHHHHHHHTTCCEEEECSSTHHHHHH
T ss_pred CCcEEEEeE-hHHHHHHHHHHHHCCCeEEEEcCCHHHHHHH
Confidence 568999996 9999999999999999999999987654443
|
| >d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Plasmodium falciparum [TaxId: 5833]
Probab=96.22 E-value=0.0039 Score=44.37 Aligned_cols=35 Identities=17% Similarity=0.272 Sum_probs=31.9
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCC
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHN 39 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 39 (335)
.++|+|.|| |++|-.++..|.+.|.+|+++.|.+.
T Consensus 22 p~~v~IiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~~ 56 (117)
T d1onfa2 22 SKKIGIVGS-GYIAVELINVIKRLGIDSYIFARGNR 56 (117)
T ss_dssp CSEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSSS
T ss_pred CCEEEEECC-chHHHHHHHHHHhccccceeeehhcc
Confidence 578999998 99999999999999999999988654
|
| >d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Probab=96.21 E-value=0.0044 Score=47.16 Aligned_cols=79 Identities=18% Similarity=0.256 Sum_probs=49.8
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCC-CeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCC-HHHHHHHHhcC
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGG-FKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRN-KDDLDKLFSSQ 80 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d-~~~~~~~~~~~ 80 (335)
.+.+|+|.|++|.+|..+++.+...| ..|+++++++.+. +.+++.. .. ..+..+-.| .+++.+.....
T Consensus 27 ~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~----~~~~~~G-----a~-~~i~~~~~~~~~~~~~~~~~~ 96 (170)
T d1jvba2 27 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAV----EAAKRAG-----AD-YVINASMQDPLAEIRRITESK 96 (170)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHH----HHHHHHT-----CS-EEEETTTSCHHHHHHHHTTTS
T ss_pred CCCEEEEEeccccceeeeeecccccccccccccccchhhH----HHHHHcC-----Cc-eeeccCCcCHHHHHHHHhhcc
Confidence 45789999999999999999998888 5788888754332 2222221 11 223322222 23344444445
Q ss_pred CCCEEEEcccc
Q 019795 81 KFEAVIHFGAL 91 (335)
Q Consensus 81 ~~d~vi~~a~~ 91 (335)
++|+||.+++.
T Consensus 97 ~~d~vid~~g~ 107 (170)
T d1jvba2 97 GVDAVIDLNNS 107 (170)
T ss_dssp CEEEEEESCCC
T ss_pred cchhhhccccc
Confidence 79999998875
|
| >d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=96.20 E-value=0.0028 Score=48.74 Aligned_cols=47 Identities=15% Similarity=0.349 Sum_probs=37.1
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhh
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKD 50 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~ 50 (335)
.++|+|+|.|+ |+.+++++..|.+.| +|+++.|+..+.....+.+..
T Consensus 16 ~~~k~vlIlGa-GG~arai~~aL~~~~-~i~I~nR~~~ka~~l~~~~~~ 62 (177)
T d1nvta1 16 VKDKNIVIYGA-GGAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAE 62 (177)
T ss_dssp CCSCEEEEECC-SHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHH
T ss_pred cCCCEEEEECC-cHHHHHHHHHHcccc-ceeeehhhhhHHHHHHHHHHH
Confidence 46899999997 889999999997777 899999976665555554443
|
| >d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains species: Escherichia coli [TaxId: 562]
Probab=96.19 E-value=0.014 Score=41.56 Aligned_cols=75 Identities=15% Similarity=0.244 Sum_probs=56.2
Q ss_pred CCeEEEEcCCC----------hhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHH
Q 019795 4 EKNILVTGGAG----------FIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDL 73 (335)
Q Consensus 4 ~~~vlItGatG----------~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~ 73 (335)
.|+|||.|+.. +-+.+.++.|.+.|++++.+.-++.+...-.+ -..-+.+.-...+.+
T Consensus 7 ~kkvlilGsGp~~IGq~~EfDy~~~~a~~alke~g~~~iliN~NP~TVstd~d------------~aD~lYfePlt~e~v 74 (127)
T d1a9xa3 7 IKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVINVNSNPATIMTDPE------------MADATYIEPIHWEVV 74 (127)
T ss_dssp CCEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHHTCEEEEECSCTTCGGGCGG------------GSSEEECSCCCHHHH
T ss_pred CCEEEEECCCcCcccccchhHHHHHHHHHHHHHcCCeEEEecCchHhhhcChh------------hcceeeeecCCHHHH
Confidence 48999999854 67899999999999999999888776543222 112244455567889
Q ss_pred HHHHhcCCCCEEEEccc
Q 019795 74 DKLFSSQKFEAVIHFGA 90 (335)
Q Consensus 74 ~~~~~~~~~d~vi~~a~ 90 (335)
.++++..+||.|+-..|
T Consensus 75 ~~Ii~~E~pd~il~~~G 91 (127)
T d1a9xa3 75 RKIIEKERPDAVLPTMG 91 (127)
T ss_dssp HHHHHHHCCSEEECSSS
T ss_pred HHHHHHhCcCCeEEEee
Confidence 99999889999985433
|
| >d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Horse (Equus caballus) [TaxId: 9796]
Probab=96.15 E-value=0.0076 Score=46.03 Aligned_cols=79 Identities=14% Similarity=0.106 Sum_probs=50.5
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCC-CeEEEEecCCCCchhhHHhhhhhcCCccccceeEEE-ccCCC-HHHHHHHHhc
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGG-FKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHV-GDLRN-KDDLDKLFSS 79 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~-~Dl~d-~~~~~~~~~~ 79 (335)
++.+|+|.|+ |.+|...+..+...| ..|+++++++.+.+... ++ . ....+. .|-.+ .+...+....
T Consensus 28 ~GdtVlV~Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a~-~~---G------a~~~i~~~~~~~~~~~~~~~~~~ 96 (176)
T d2jhfa2 28 QGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAK-EV---G------ATECVNPQDYKKPIQEVLTEMSN 96 (176)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-HT---T------CSEEECGGGCSSCHHHHHHHHTT
T ss_pred CCCEEEEECC-CCcHHHHHHHHHHcCCceEEeecCcHHHHHHHH-Hh---C------CeeEEecCCchhHHHHHHHHHhc
Confidence 4678999999 679999999999987 57888887655543222 11 1 111221 22222 3344555555
Q ss_pred CCCCEEEEccccc
Q 019795 80 QKFEAVIHFGALK 92 (335)
Q Consensus 80 ~~~d~vi~~a~~~ 92 (335)
.++|++|.+.+..
T Consensus 97 ~G~D~vid~~G~~ 109 (176)
T d2jhfa2 97 GGVDFSFEVIGRL 109 (176)
T ss_dssp SCBSEEEECSCCH
T ss_pred CCCCEEEecCCch
Confidence 6899999988763
|
| >d2g17a1 c.2.1.3 (A:1-153,A:309-334) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC species: Salmonella typhimurium [TaxId: 90371]
Probab=96.14 E-value=0.0024 Score=49.33 Aligned_cols=31 Identities=16% Similarity=0.341 Sum_probs=26.5
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhC-CCeEEEE
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQG-GFKVVLI 34 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~-g~~V~~~ 34 (335)
|++|.|.||||++|+.|++.|.+. ..++..+
T Consensus 1 MikVaIiGATGyvG~eLlrlL~~HP~~ei~~l 32 (179)
T d2g17a1 1 MLNTLIVGASGYAGAELVSYVNRHPHMTITAL 32 (179)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHCTTEEEEEE
T ss_pred CcEEEEECcccHHHHHHHHHHHhCCCCceEee
Confidence 679999999999999999999986 4566544
|
| >d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Aquifex aeolicus [TaxId: 63363]
Probab=96.14 E-value=0.0018 Score=49.41 Aligned_cols=35 Identities=34% Similarity=0.515 Sum_probs=29.6
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhCCC--eEEEEecCCC
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQGGF--KVVLIDNLHN 39 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~ 39 (335)
||+|+|.|. |.+|..+++.|.+.|+ +|+++++++.
T Consensus 1 Mk~I~IIG~-G~mG~sla~~L~~~g~~~~I~~~D~~~~ 37 (171)
T d2g5ca2 1 MQNVLIVGV-GFMGGSFAKSLRRSGFKGKIYGYDINPE 37 (171)
T ss_dssp CCEEEEESC-SHHHHHHHHHHHHTTCCSEEEEECSCHH
T ss_pred CCEEEEEcc-CHHHHHHHHHHHhcCCCeEEEEEECChH
Confidence 678999985 9999999999999986 6777877533
|
| >d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Probab=96.11 E-value=0.0077 Score=45.92 Aligned_cols=78 Identities=9% Similarity=-0.017 Sum_probs=47.1
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCe-EEEEecCCCCchhhHHhhhhhcCCccccceeEEEcc--CCCHHHHHHHHhc
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFK-VVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGD--LRNKDDLDKLFSS 79 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D--l~d~~~~~~~~~~ 79 (335)
++.+|+|.|+ |.+|...++.+...|+. |+++++++.+ .+..+++. --.++..+ -.+.....+....
T Consensus 28 ~G~tVlI~Ga-GGvG~~aiq~ak~~G~~~vi~~~~~~~k-~~~ak~lG---------a~~~i~~~~~~~~~~~~~~~~~~ 96 (176)
T d2fzwa2 28 PGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDK-FARAKEFG---------ATECINPQDFSKPIQEVLIEMTD 96 (176)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGG-HHHHHHHT---------CSEEECGGGCSSCHHHHHHHHTT
T ss_pred CCCEEEEecc-hhHHHHHHHHHHHHhcCceEEEcccHHH-HHHHHHhC---------CcEEEeCCchhhHHHHHHHHHcC
Confidence 4678999998 67899999999888865 5556554333 22233221 11223221 1223334444444
Q ss_pred CCCCEEEEcccc
Q 019795 80 QKFEAVIHFGAL 91 (335)
Q Consensus 80 ~~~d~vi~~a~~ 91 (335)
.++|+||.+.+.
T Consensus 97 ~g~D~vid~~G~ 108 (176)
T d2fzwa2 97 GGVDYSFECIGN 108 (176)
T ss_dssp SCBSEEEECSCC
T ss_pred CCCcEeeecCCC
Confidence 689999998775
|
| >d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Escherichia coli [TaxId: 562]
Probab=96.09 E-value=0.0046 Score=43.86 Aligned_cols=36 Identities=22% Similarity=0.345 Sum_probs=32.2
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCC
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNS 40 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~ 40 (335)
.++++|.|| |++|..++..|.+.|.+|+++.|.+.-
T Consensus 21 p~~vvIiGg-G~ig~E~A~~l~~~G~~Vtlve~~~~~ 56 (116)
T d1gesa2 21 PERVAVVGA-GYIGVELGGVINGLGAKTHLFEMFDAP 56 (116)
T ss_dssp CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCEEEEECC-ChhhHHHHHHhhccccEEEEEeecchh
Confidence 378999998 999999999999999999999887543
|
| >d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Potassium channel-related protein MthK species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]
Probab=96.09 E-value=0.0033 Score=45.53 Aligned_cols=69 Identities=23% Similarity=0.257 Sum_probs=50.0
Q ss_pred CeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCCCE
Q 019795 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKFEA 84 (335)
Q Consensus 5 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~d~ 84 (335)
|.++|.|. |-+|+.+++.|. |++|++++.++..... +.. .++.++.+|.++++.++++- -...+.
T Consensus 1 kHivI~G~-g~~g~~l~~~L~--~~~i~vi~~d~~~~~~----~~~-------~~~~~i~Gd~~~~~~L~~a~-i~~A~~ 65 (129)
T d2fy8a1 1 RHVVICGW-SESTLECLRELR--GSEVFVLAEDENVRKK----VLR-------SGANFVHGDPTRVSDLEKAN-VRGARA 65 (129)
T ss_dssp CCEEEESC-CHHHHHHHHTSC--GGGEEEEESCTTHHHH----HHH-------TTCEEEESCTTSHHHHHHTT-CTTCSE
T ss_pred CEEEEECC-CHHHHHHHHHHc--CCCCEEEEcchHHHHH----HHh-------cCccccccccCCHHHHHHhh-hhcCcE
Confidence 57899997 889999999994 6678888775443222 221 57889999999998777742 236778
Q ss_pred EEEc
Q 019795 85 VIHF 88 (335)
Q Consensus 85 vi~~ 88 (335)
++-+
T Consensus 66 vi~~ 69 (129)
T d2fy8a1 66 VIVN 69 (129)
T ss_dssp EEEC
T ss_pred EEEe
Confidence 8754
|
| >d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Azotobacter vinelandii [TaxId: 354]
Probab=96.05 E-value=0.0055 Score=43.69 Aligned_cols=36 Identities=19% Similarity=0.294 Sum_probs=32.3
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCC
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNS 40 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~ 40 (335)
.++++|.|| |+||-.++..|.+.|.+|+++.+.+.-
T Consensus 22 p~~i~IiG~-G~ig~E~A~~l~~~G~~Vtiv~~~~~l 57 (119)
T d3lada2 22 PGKLGVIGA-GVIGLELGSVWARLGAEVTVLEAMDKF 57 (119)
T ss_dssp CSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSSS
T ss_pred CCeEEEECC-ChHHHHHHHHHHHcCCceEEEEeeccc
Confidence 378999998 999999999999999999999887543
|
| >d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH oxidase /nitrite reductase species: Pyrococcus furiosus [TaxId: 2261]
Probab=96.03 E-value=0.0043 Score=44.46 Aligned_cols=35 Identities=34% Similarity=0.558 Sum_probs=31.4
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCC
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHN 39 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 39 (335)
.++++|.|| |++|-.++..|.+.|++|+++.+.+.
T Consensus 32 ~~~vvIiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~~ 66 (122)
T d1xhca2 32 SGEAIIIGG-GFIGLELAGNLAEAGYHVKLIHRGAM 66 (122)
T ss_dssp HSEEEEEEC-SHHHHHHHHHHHHTTCEEEEECSSSC
T ss_pred CCcEEEECC-cHHHHHHHHHhhcccceEEEEecccc
Confidence 378999998 99999999999999999999988644
|
| >d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: S-adenosylhomocystein hydrolase species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.02 E-value=0.0044 Score=46.55 Aligned_cols=70 Identities=19% Similarity=0.217 Sum_probs=49.4
Q ss_pred CCCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcC
Q 019795 1 MASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQ 80 (335)
Q Consensus 1 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~ 80 (335)
|+.+|+|+|.| .|.+|+.+++.|...|.+|++.+..+-.. +.... ...... .+++++.
T Consensus 21 ~l~Gk~v~V~G-yG~iG~g~A~~~rg~G~~V~v~e~dp~~a------l~A~~-----dG~~v~--------~~~~a~~-- 78 (163)
T d1li4a1 21 MIAGKVAVVAG-YGDVGKGCAQALRGFGARVIITEIDPINA------LQAAM-----EGYEVT--------TMDEACQ-- 78 (163)
T ss_dssp CCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHH------HHHHH-----TTCEEC--------CHHHHTT--
T ss_pred eecCCEEEEec-cccccHHHHHHHHhCCCeeEeeecccchh------HHhhc-----CceEee--------ehhhhhh--
Confidence 67899999999 59999999999999999999998754221 11111 122221 2456666
Q ss_pred CCCEEEEccccc
Q 019795 81 KFEAVIHFGALK 92 (335)
Q Consensus 81 ~~d~vi~~a~~~ 92 (335)
..|++|-+.+..
T Consensus 79 ~adivvtaTGn~ 90 (163)
T d1li4a1 79 EGNIFVTTTGCI 90 (163)
T ss_dssp TCSEEEECSSCS
T ss_pred hccEEEecCCCc
Confidence 679998877753
|
| >d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain species: Escherichia coli [TaxId: 562]
Probab=96.00 E-value=0.0063 Score=39.57 Aligned_cols=36 Identities=19% Similarity=0.106 Sum_probs=32.1
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCC
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNS 40 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~ 40 (335)
||+|.|.|+ |.+|+-++..-.+.|++|++++..+..
T Consensus 1 ~k~vgIlG~-GQLgrMl~~Aa~~LG~~v~vldp~~~~ 36 (78)
T d3etja2 1 MKQVCVLGN-GQLGRMLRQAGEPLGIAVWPVGLDAEP 36 (78)
T ss_dssp CEEEEEEBC-SHHHHHHHHHHGGGTEEEEEECTTSCG
T ss_pred CCEEEEEcC-CHHHHHHHHHHHHcCCEEEEEcCCCCC
Confidence 689999997 999999999999999999999875543
|
| >d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Frog (Rana perezi) [TaxId: 8403]
Probab=95.99 E-value=0.014 Score=44.44 Aligned_cols=78 Identities=10% Similarity=0.056 Sum_probs=50.6
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCC--HHHHHHHHhc
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGF-KVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRN--KDDLDKLFSS 79 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d--~~~~~~~~~~ 79 (335)
++.+|+|.|+ |.+|...++.+...|+ +|+++++++.+.+.. +++ . -..++...-.| ..+.......
T Consensus 27 ~G~~VlV~Ga-GgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a-~~l---G------a~~~i~~~~~d~~~~~~~~~~~~ 95 (174)
T d1p0fa2 27 PGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKA-IEL---G------ATECLNPKDYDKPIYEVICEKTN 95 (174)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHH-HHT---T------CSEEECGGGCSSCHHHHHHHHTT
T ss_pred CCCEEEEECC-CchhHHHHHHHHHcCCceeeccCChHHHHHHH-HHc---C------CcEEEcCCCchhHHHHHHHHhcC
Confidence 4678999996 9999999999998885 688888765544322 221 1 11223221122 2445555555
Q ss_pred CCCCEEEEcccc
Q 019795 80 QKFEAVIHFGAL 91 (335)
Q Consensus 80 ~~~d~vi~~a~~ 91 (335)
.++|++|.+.+.
T Consensus 96 ~G~d~vid~~g~ 107 (174)
T d1p0fa2 96 GGVDYAVECAGR 107 (174)
T ss_dssp SCBSEEEECSCC
T ss_pred CCCcEEEEcCCC
Confidence 689999998776
|
| >d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Putidaredoxin reductase species: Pseudomonas putida [TaxId: 303]
Probab=95.97 E-value=0.0059 Score=44.47 Aligned_cols=37 Identities=27% Similarity=0.604 Sum_probs=33.2
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCC
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNS 40 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~ 40 (335)
..++|+|.|| |++|-.++..|.+.|.+|+++.+.+..
T Consensus 34 ~~k~v~VIGg-G~iG~E~A~~l~~~g~~Vtvie~~~~~ 70 (133)
T d1q1ra2 34 ADNRLVVIGG-GYIGLEVAATAIKANMHVTLLDTAARV 70 (133)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSST
T ss_pred cCCEEEEECC-chHHHHHHHHHHhhCcceeeeeecccc
Confidence 4689999997 999999999999999999999886553
|
| >d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains species: Escherichia coli [TaxId: 562]
Probab=95.90 E-value=0.024 Score=39.93 Aligned_cols=74 Identities=19% Similarity=0.306 Sum_probs=54.6
Q ss_pred CCCeEEEEcCCC----------hhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHH
Q 019795 3 SEKNILVTGGAG----------FIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDD 72 (335)
Q Consensus 3 ~~~~vlItGatG----------~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~ 72 (335)
..|+|||.|+.. +-+.+.++.|.+.|++++.+..++.+...-.+ -..-+.+.-...+.
T Consensus 3 ~~kkvlViGsGp~rIGq~~EfDy~~~~a~~aLk~~g~~~IliN~NPeTVstd~d------------~aD~lYfeplt~e~ 70 (121)
T d1a9xa4 3 DREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTDYD------------TSDRLYFEPVTLED 70 (121)
T ss_dssp SSCEEEEECCCSCBTTBCHHHHHHHHHHHHHHHHTTCEEEEECCCTTSSTTSTT------------SSSEEECCCCSHHH
T ss_pred CCCEEEEECCCcCcccccchhhHHHHHHHHHHHhcCCeEEEEecChhhhhcChh------------hcCceEEccCCHHH
Confidence 468999999854 78899999999999999999888776442221 11223344446777
Q ss_pred HHHHHhcCCCCEEEEc
Q 019795 73 LDKLFSSQKFEAVIHF 88 (335)
Q Consensus 73 ~~~~~~~~~~d~vi~~ 88 (335)
+.++++..+||.|+-.
T Consensus 71 v~~Ii~~E~p~~ii~~ 86 (121)
T d1a9xa4 71 VLEIVRIEKPKGVIVQ 86 (121)
T ss_dssp HHHHHHHHCCSEEECS
T ss_pred HHHHHHHhCCCEEEee
Confidence 8888888899999854
|
| >d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.90 E-value=0.0055 Score=44.10 Aligned_cols=35 Identities=23% Similarity=0.252 Sum_probs=31.9
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCC
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHN 39 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 39 (335)
.|+++|.|| |++|-.++..|.+.|.+|+++.|++.
T Consensus 22 pk~vvIvGg-G~iG~E~A~~l~~~G~~Vtlv~~~~~ 56 (125)
T d3grsa2 22 PGRSVIVGA-GYIAVEMAGILSALGSKTSLMIRHDK 56 (125)
T ss_dssp CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CCEEEEEcC-CccHHHHHHHHhcCCcEEEEEeeccc
Confidence 378999998 99999999999999999999998754
|
| >d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Archaeon Aeropyrum pernix [TaxId: 56636]
Probab=95.89 E-value=0.01 Score=45.19 Aligned_cols=78 Identities=12% Similarity=0.069 Sum_probs=48.2
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCC
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGF-KVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQK 81 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~ 81 (335)
.+.+|+|.|+ |.+|...++.+...|. .|+++++++.+. +.+++.. ...++..+-.+.+.+.+.....+
T Consensus 32 ~g~~vli~Ga-G~vG~~~~~~a~~~g~~~vv~~~~~~~k~----~~~~~~g------a~~~i~~~~~~~~~~~~~~~~~g 100 (172)
T d1h2ba2 32 PGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKL----KLAERLG------ADHVVDARRDPVKQVMELTRGRG 100 (172)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHH----HHHHHTT------CSEEEETTSCHHHHHHHHTTTCC
T ss_pred CCCEEEEeCC-ChHHHHHHHHHHhhcCcccccccchhHHH----HHHhhcc------cceeecCcccHHHHHHHhhCCCC
Confidence 4678999986 9999999999987775 566677654322 2222221 12333332222344445544457
Q ss_pred CCEEEEcccc
Q 019795 82 FEAVIHFGAL 91 (335)
Q Consensus 82 ~d~vi~~a~~ 91 (335)
+|+||.+++.
T Consensus 101 ~d~vid~~g~ 110 (172)
T d1h2ba2 101 VNVAMDFVGS 110 (172)
T ss_dssp EEEEEESSCC
T ss_pred ceEEEEecCc
Confidence 9999998886
|
| >d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Probab=95.89 E-value=0.026 Score=43.03 Aligned_cols=79 Identities=14% Similarity=0.104 Sum_probs=52.8
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCC-CeEEEEecCCCCchhhHHhhhhhcCCccccceeEEE-ccCCC-HHHHHHHHhc
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGG-FKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHV-GDLRN-KDDLDKLFSS 79 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~-~Dl~d-~~~~~~~~~~ 79 (335)
++.+|+|.|+ |.+|...++.+...| .+|+++++++.+.+.+. ++. . ...+. -|-.+ .+.+.++...
T Consensus 29 ~g~tVlI~G~-GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~Ak-~~G--------A-~~~in~~~~~~~~~~~~~~~~g 97 (176)
T d1d1ta2 29 PGSTCVVFGL-GGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAM-AVG--------A-TECISPKDSTKPISEVLSEMTG 97 (176)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-HHT--------C-SEEECGGGCSSCHHHHHHHHHT
T ss_pred CCCEEEEECC-CchhHHHHHHHHHcCCceEEEecCcHHHHHHHH-hcC--------C-cEEECccccchHHHHHHHHhcc
Confidence 4678999987 999999999999998 57999998766543222 221 1 11222 22222 3445566666
Q ss_pred CCCCEEEEccccc
Q 019795 80 QKFEAVIHFGALK 92 (335)
Q Consensus 80 ~~~d~vi~~a~~~ 92 (335)
.++|++|.+.+..
T Consensus 98 ~G~d~vi~~~g~~ 110 (176)
T d1d1ta2 98 NNVGYTFEVIGHL 110 (176)
T ss_dssp SCCCEEEECSCCH
T ss_pred ccceEEEEeCCch
Confidence 6899999987763
|
| >d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Pseudomonas putida [TaxId: 303]
Probab=95.87 E-value=0.0044 Score=43.88 Aligned_cols=35 Identities=23% Similarity=0.527 Sum_probs=31.5
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCC
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHN 39 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 39 (335)
.++++|.|| |++|-.++..|.+.|++|+++.+.+.
T Consensus 21 p~~vvIiGg-G~~G~E~A~~l~~~g~~Vtlve~~~~ 55 (115)
T d1lvla2 21 PQHLVVVGG-GYIGLELGIAYRKLGAQVSVVEARER 55 (115)
T ss_dssp CSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred CCeEEEECC-CHHHHHHHHHHhhcccceEEEeeecc
Confidence 378999997 99999999999999999999988654
|
| >d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Molybdenum cofactor biosynthesis protein MoeB domain: Molybdenum cofactor biosynthesis protein MoeB species: Escherichia coli [TaxId: 562]
Probab=95.84 E-value=0.021 Score=46.10 Aligned_cols=109 Identities=17% Similarity=0.225 Sum_probs=62.9
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCC-------------------chhhHHhhhhhcCCccccceeE
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGF-KVVLIDNLHNS-------------------VPEAVDRVKDLAGPELAKKLEF 62 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~-------------------~~~~~~~~~~~~~~~~~~~i~~ 62 (335)
++++|+|.|+ |.+|++++..|+..|. +++++|.+.-. ...+.+++.++- +.+.+
T Consensus 29 ~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~Ve~sNL~RQ~l~~~~diG~~K~~~a~~~l~~~n-----p~~~i 102 (247)
T d1jw9b_ 29 KDSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRIN-----PHIAI 102 (247)
T ss_dssp HHCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHC-----TTSEE
T ss_pred hCCCEEEECC-CHHHHHHHHHHHHcCCCeEEEECCcccchhhhhhhccccHhhcCchHHHHHHHHHHHhh-----cccch
Confidence 3578999997 9999999999999995 57777644322 111222222221 33333
Q ss_pred EEccC-CCHHHHHHHHhcCCCCEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccccC
Q 019795 63 HVGDL-RNKDDLDKLFSSQKFEAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATIYG 137 (335)
Q Consensus 63 ~~~Dl-~d~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~vyg 137 (335)
...+. .+.......+. ..|+++.+... ......+-+.|.+.+. .+|+.+....+|
T Consensus 103 ~~~~~~~~~~~~~~~~~--~~divid~~d~-----------------~~~~~~in~~~~~~~i-p~i~g~~~~~~g 158 (247)
T d1jw9b_ 103 TPVNALLDDAELAALIA--EHDLVLDCTDN-----------------VAVRNQLNAGCFAAKV-PLVSGAAIRMEG 158 (247)
T ss_dssp EEECSCCCHHHHHHHHH--TSSEEEECCSS-----------------HHHHHHHHHHHHHHTC-CEEEEEEEBTEE
T ss_pred hhhhhhhhhcccccccc--ccceeeeccch-----------------hhhhhhHHHHHHHhCC-Cccccccccccc
Confidence 33332 23444555666 67888865432 2222345556777764 566665544444
|
| >d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Alpha-glucosidase AglA species: Thermotoga maritima [TaxId: 2336]
Probab=95.83 E-value=0.0084 Score=45.67 Aligned_cols=119 Identities=17% Similarity=0.118 Sum_probs=67.8
Q ss_pred CCeEEEEcCCChhhHH--HHHHHHhC----CCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHH
Q 019795 4 EKNILVTGGAGFIGTH--CALQLLQG----GFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLF 77 (335)
Q Consensus 4 ~~~vlItGatG~iG~~--l~~~L~~~----g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~ 77 (335)
.+||.|.|| |.+|.. ++..|+.. +.+++.+++++.........+.+... .......+.. ..+.++++
T Consensus 2 ~mKI~iIGa-Gsvg~t~~~~~~l~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~-~~~~~~~i~~-----~td~~eaL 74 (171)
T d1obba1 2 SVKIGIIGA-GSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVE-EVGADLKFEK-----TMNLDDVI 74 (171)
T ss_dssp CCEEEEETT-TCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHH-HTTCCCEEEE-----ESCHHHHH
T ss_pred CcEEEEECC-CHHHhHHHHHHHHHhccccCCCEEEEEeCCchHHHHHHHHHHHHHH-hcCCCeEEEE-----eCChhhcc
Confidence 579999997 888865 34445543 46999999976654443333333211 1112232222 22355667
Q ss_pred hcCCCCEEEEcccccchhhhhcChHHH------------------------HHHhHHHHHHHHHHHHHcCCC-EEEEec
Q 019795 78 SSQKFEAVIHFGALKAVAESVQHPFRY------------------------FDNNLIGTINLYQAMAKYNCK-KLVFSS 131 (335)
Q Consensus 78 ~~~~~d~vi~~a~~~~~~~~~~~~~~~------------------------~~~nv~~~~~l~~~~~~~~~~-~~v~~S 131 (335)
+ +.|+|+..++.............. ..-|+.....+++.+++...+ .++++|
T Consensus 75 ~--dad~Vv~~~~~g~~~~~~~~~~i~~~~g~~~~~~~~~~~~~g~~~~~~~~rn~~i~~~i~~~i~~~~p~a~~i~~T 151 (171)
T d1obba1 75 I--DADFVINTAMVGGHTYLEKVRQIGEKYGYYRGIDAQEFNMVSDYYTFSNYNQLKYFVDIARKIEKLSPKAWYLQAA 151 (171)
T ss_dssp T--TCSEEEECCCTTHHHHHHHHHHHHHHTTCTTCTTCBTTBCCTTCCSSSCHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred c--CCCeEeeecccccccceeeehhcchhhhhccCCCccccCCCCCcceeeecchHHHHHHHHHHHHHHCcCeEEEEEC
Confidence 6 789999998875432211110000 123777788888888887654 444544
|
| >d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Pyrroline-5-carboxylate reductase ProC species: Streptococcus pyogenes [TaxId: 1314]
Probab=95.75 E-value=0.0049 Score=46.04 Aligned_cols=35 Identities=14% Similarity=0.130 Sum_probs=30.4
Q ss_pred CeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCC
Q 019795 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNS 40 (335)
Q Consensus 5 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~ 40 (335)
|+|.+.|+ |-+|+++++.|.+.|+++++.+|+..+
T Consensus 1 MkIg~IG~-G~mG~al~~~l~~~~~~i~v~~r~~~~ 35 (152)
T d2ahra2 1 MKIGIIGV-GKMASAIIKGLKQTPHELIISGSSLER 35 (152)
T ss_dssp CEEEEECC-SHHHHHHHHHHTTSSCEEEEECSSHHH
T ss_pred CEEEEEec-cHHHHHHHHHHHhCCCeEEEEcChHHh
Confidence 57888985 999999999999999999999886543
|
| >d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Mammalian thioredoxin reductase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=95.70 E-value=0.0062 Score=43.62 Aligned_cols=32 Identities=25% Similarity=0.398 Sum_probs=29.9
Q ss_pred CeEEEEcCCChhhHHHHHHHHhCCCeEEEEecC
Q 019795 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNL 37 (335)
Q Consensus 5 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~ 37 (335)
++++|.|| |+||..++..|.+.|.+|+++.|+
T Consensus 21 ~~vvIIGg-G~iG~E~A~~l~~lG~~Vtii~~~ 52 (122)
T d1h6va2 21 GKTLVVGA-SYVALECAGFLAGIGLDVTVMVRS 52 (122)
T ss_dssp CSEEEECC-SHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CeEEEECC-CccHHHHHHHHhhcCCeEEEEEec
Confidence 67999998 999999999999999999999874
|
| >d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Putative formate dehydrogenase species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]
Probab=95.69 E-value=0.014 Score=44.87 Aligned_cols=63 Identities=21% Similarity=0.184 Sum_probs=47.3
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCC
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQK 81 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~ 81 (335)
+.+|+|.|.|. |-||+.+++.|..-|.+|++.+|++.... .. -.+++++++. .
T Consensus 40 l~gk~vgIiG~-G~IG~~va~~l~~~g~~v~~~d~~~~~~~-----------------~~-------~~~~l~ell~--~ 92 (181)
T d1qp8a1 40 IQGEKVAVLGL-GEIGTRVGKILAALGAQVRGFSRTPKEGP-----------------WR-------FTNSLEEALR--E 92 (181)
T ss_dssp CTTCEEEEESC-STHHHHHHHHHHHTTCEEEEECSSCCCSS-----------------SC-------CBSCSHHHHT--T
T ss_pred ccCceEEEecc-ccccccceeeeeccccccccccccccccc-----------------ee-------eeechhhhhh--c
Confidence 56899999997 99999999999999999999988654321 00 0124667887 7
Q ss_pred CCEEEEcccc
Q 019795 82 FEAVIHFGAL 91 (335)
Q Consensus 82 ~d~vi~~a~~ 91 (335)
.|+|+.+...
T Consensus 93 sDiv~~~~pl 102 (181)
T d1qp8a1 93 ARAAVCALPL 102 (181)
T ss_dssp CSEEEECCCC
T ss_pred cchhhccccc
Confidence 7988865544
|
| >d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Thermotoga maritima [TaxId: 2336]
Probab=95.60 E-value=0.008 Score=43.37 Aligned_cols=30 Identities=20% Similarity=0.273 Sum_probs=26.6
Q ss_pred CeEEEEcCCChhhHHHHHHHHhCCCeEEEE
Q 019795 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLI 34 (335)
Q Consensus 5 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~ 34 (335)
|+|.|.|++|-+|+.+++.+.+.|+++++.
T Consensus 1 mki~i~G~~GrMG~~i~~~~~~~~~~l~~~ 30 (128)
T d1vm6a3 1 MKYGIVGYSGRMGQEIQKVFSEKGHELVLK 30 (128)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHhcCCCeEEEE
Confidence 579999999999999999999999887653
|
| >d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Escherichia coli [TaxId: 562]
Probab=95.60 E-value=0.021 Score=42.87 Aligned_cols=35 Identities=20% Similarity=0.381 Sum_probs=31.6
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEec
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDN 36 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r 36 (335)
+.+|+|+|.|.+..+|+.|+..|.++|+.|+.+..
T Consensus 35 l~GK~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~ 69 (166)
T d1b0aa1 35 TFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHR 69 (166)
T ss_dssp CTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECS
T ss_pred cccceEEEEeccccccHHHHHHHHHhhcccccccc
Confidence 46899999999999999999999999999887753
|
| >d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Mouse (Mus musculus), class II [TaxId: 10090]
Probab=95.54 E-value=0.024 Score=43.17 Aligned_cols=79 Identities=13% Similarity=0.143 Sum_probs=50.8
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCC--CHHHHHHHHhc
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGF-KVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLR--NKDDLDKLFSS 79 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~--d~~~~~~~~~~ 79 (335)
.+.+|+|.|+ |.||...++.+...|. .|++.++++.+.+ ..+++ + ....+...-. ......+....
T Consensus 28 ~G~~VlV~G~-G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~-~a~~~----G-----a~~~i~~~~~~~~~~~~~~~~~~ 96 (174)
T d1e3ia2 28 PGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFP-KAKAL----G-----ATDCLNPRELDKPVQDVITELTA 96 (174)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHH-HHHHT----T-----CSEEECGGGCSSCHHHHHHHHHT
T ss_pred CCCEEEEECC-ChHHHHHHHHHHHhCCceeeeeccchHHHH-HHHHh----C-----CCcccCCccchhhhhhhHhhhhc
Confidence 4678999986 9999999999999997 5777777554432 22222 1 1122322222 23444555555
Q ss_pred CCCCEEEEccccc
Q 019795 80 QKFEAVIHFGALK 92 (335)
Q Consensus 80 ~~~d~vi~~a~~~ 92 (335)
.++|++|.++|..
T Consensus 97 ~G~d~vie~~G~~ 109 (174)
T d1e3ia2 97 GGVDYSLDCAGTA 109 (174)
T ss_dssp SCBSEEEESSCCH
T ss_pred CCCcEEEEecccc
Confidence 7899999998863
|
| >d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Escherichia coli [TaxId: 562]
Probab=95.54 E-value=0.0057 Score=46.16 Aligned_cols=32 Identities=16% Similarity=0.269 Sum_probs=26.8
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhC-CCeEEEE
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQG-GFKVVLI 34 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~-g~~V~~~ 34 (335)
+.++|.|.|++|-+|+.+++.+.+. +.++++.
T Consensus 3 s~ikI~i~Ga~GrMG~~i~~~i~~~~~~~lv~~ 35 (162)
T d1diha1 3 ANIRVAIAGAGGRMGRQLIQAALALEGVQLGAA 35 (162)
T ss_dssp CBEEEEETTTTSHHHHHHHHHHHHSTTEECCCE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCCEEEEE
Confidence 4578999999999999999999886 6776543
|
| >d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase species: Xanthobacter sp., py2 [TaxId: 35809]
Probab=95.54 E-value=0.012 Score=41.81 Aligned_cols=36 Identities=14% Similarity=0.218 Sum_probs=32.3
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCC
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHN 39 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 39 (335)
..++++|.|| |++|..++..|.+.|.+|+++.|.+.
T Consensus 21 ~~~~vvVvGg-G~ig~E~A~~l~~~g~~vt~i~~~~~ 56 (121)
T d1mo9a2 21 PGSTVVVVGG-SKTAVEYGCFFNATGRRTVMLVRTEP 56 (121)
T ss_dssp CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCT
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhcchhheEeeccch
Confidence 3589999997 99999999999999999999988654
|
| >d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Garden pea (Pisum sativum) [TaxId: 3888]
Probab=95.53 E-value=0.0063 Score=43.65 Aligned_cols=36 Identities=22% Similarity=0.352 Sum_probs=32.5
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCC
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNS 40 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~ 40 (335)
.++++|.|| |++|-.++..|.+.|.+|+++.|++.-
T Consensus 25 p~~~viiG~-G~iglE~A~~~~~~G~~Vtvi~~~~~~ 60 (123)
T d1dxla2 25 PKKLVVIGA-GYIGLEMGSVWGRIGSEVTVVEFASEI 60 (123)
T ss_dssp CSEEEESCC-SHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred CCeEEEEcc-chHHHHHHHHHHhcCCeEEEEEEcccc
Confidence 478999998 999999999999999999999887654
|
| >d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.51 E-value=0.02 Score=43.27 Aligned_cols=35 Identities=17% Similarity=0.216 Sum_probs=32.2
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEec
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDN 36 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r 36 (335)
+.+|+|+|.|.+.-+|+.|+..|+++|+.|+.+..
T Consensus 37 l~Gk~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~ 71 (170)
T d1a4ia1 37 IAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHS 71 (170)
T ss_dssp CTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECT
T ss_pred cccceEEEEecCCccchHHHHHHHhccCceEEEec
Confidence 46899999999999999999999999999998765
|
| >d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: UDP-galactopyranose mutase, N-terminal domain domain: UDP-galactopyranose mutase, N-terminal domain species: Klebsiella pneumoniae [TaxId: 573]
Probab=95.51 E-value=0.0078 Score=50.72 Aligned_cols=36 Identities=36% Similarity=0.591 Sum_probs=32.8
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCC
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHN 39 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 39 (335)
++|+|+|.|| |+-|..+|..|++.|++|.++.++..
T Consensus 1 k~KKI~IIGa-G~sGL~aA~~L~k~G~~V~viEk~~~ 36 (314)
T d2bi7a1 1 KSKKILIVGA-GFSGAVIGRQLAEKGHQVHIIDQRDH 36 (314)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred CCCEEEEECC-cHHHHHHHHHHHhCCCCEEEEECCCC
Confidence 5799999998 99999999999999999999987654
|
| >d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase species: Escherichia coli [TaxId: 562]
Probab=95.49 E-value=0.026 Score=41.68 Aligned_cols=35 Identities=23% Similarity=0.289 Sum_probs=29.8
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhC--CCeEEEEecCC
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQG--GFKVVLIDNLH 38 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~--g~~V~~~~r~~ 38 (335)
||+|.|.|+||-||.....-+.+. .++|++++-..
T Consensus 1 MK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~~ 37 (151)
T d1q0qa2 1 MKQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGK 37 (151)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEESS
T ss_pred CCeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEecC
Confidence 789999999999999999999885 57888876543
|
| >d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Nicotinamide nucleotide transhydrogenase dI component species: Rhodospirillum rubrum [TaxId: 1085]
Probab=95.37 E-value=0.029 Score=42.74 Aligned_cols=40 Identities=20% Similarity=0.172 Sum_probs=34.9
Q ss_pred CeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhH
Q 019795 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAV 45 (335)
Q Consensus 5 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~ 45 (335)
-+|+|.|| |-.|.+-++.....|.+|.+++.+........
T Consensus 30 a~VvViGa-GvaG~~Aa~~A~~lGA~V~v~D~~~~~~~~l~ 69 (183)
T d1l7da1 30 ARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQVE 69 (183)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHHH
T ss_pred cEEEEEcC-cHHHHHHHHHHHHcCCEEEEEeccHHHHHHHH
Confidence 47999998 99999999999999999999999877655443
|
| >d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Formaldehyde dehydrogenase species: Pseudomonas putida [TaxId: 303]
Probab=95.35 E-value=0.032 Score=43.27 Aligned_cols=78 Identities=14% Similarity=0.172 Sum_probs=49.9
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCC---HHHHHHHH
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGF-KVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRN---KDDLDKLF 77 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d---~~~~~~~~ 77 (335)
..+.+|+|.|+ |.+|...++.+...|. +|+++++++.+.+. ..+. +...+. |-.+ .+.+.++.
T Consensus 24 ~~G~tVlV~Ga-G~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~----a~~~-------Ga~~~~-~~~~~~~~~~i~~~t 90 (195)
T d1kola2 24 GPGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAH----AKAQ-------GFEIAD-LSLDTPLHEQIAALL 90 (195)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHH----HHHT-------TCEEEE-TTSSSCHHHHHHHHH
T ss_pred CCCCEEEEECc-CHHHHHHHHHHHhhcccceeeecccchhhHh----hhhc-------cccEEE-eCCCcCHHHHHHHHh
Confidence 35679999986 9999888888877775 78888875443322 1211 122222 2222 24566666
Q ss_pred hcCCCCEEEEccccc
Q 019795 78 SSQKFEAVIHFGALK 92 (335)
Q Consensus 78 ~~~~~d~vi~~a~~~ 92 (335)
...++|++|.+.|..
T Consensus 91 ~g~g~D~vid~vG~~ 105 (195)
T d1kola2 91 GEPEVDCAVDAVGFE 105 (195)
T ss_dssp SSSCEEEEEECCCTT
T ss_pred CCCCcEEEEECcccc
Confidence 666899999988853
|
| >d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Neisseria meningitidis [TaxId: 487]
Probab=95.32 E-value=0.009 Score=42.91 Aligned_cols=35 Identities=20% Similarity=0.417 Sum_probs=31.7
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCC
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHN 39 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 39 (335)
.++++|.|| |+||-.++..|.+.|.+|+++.+.+.
T Consensus 26 p~~vvIiGg-G~IG~E~A~~~~~~G~~Vtive~~~~ 60 (125)
T d1ojta2 26 PGKLLIIGG-GIIGLEMGTVYSTLGSRLDVVEMMDG 60 (125)
T ss_dssp CSEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred CCeEEEECC-CHHHHHHHHHhhcCCCEEEEEEeecc
Confidence 378999998 99999999999999999999988654
|
| >d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Transcription corepressor CtbP species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]
Probab=95.26 E-value=0.019 Score=44.52 Aligned_cols=38 Identities=24% Similarity=0.341 Sum_probs=33.6
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCC
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNS 40 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~ 40 (335)
+.+|+|.|.|. |-||+.+++.|..-|.+|.+.++....
T Consensus 47 L~gktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~ 84 (193)
T d1mx3a1 47 IRGETLGIIGL-GRVGQAVALRAKAFGFNVLFYDPYLSD 84 (193)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECTTSCT
T ss_pred eeCceEEEecc-ccccccceeeeeccccceeeccCcccc
Confidence 46789999996 999999999999999999999886554
|
| >d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Dihydropyrimidine dehydrogenase, domain 2 species: Pig (Sus scrofa) [TaxId: 9823]
Probab=95.24 E-value=0.009 Score=46.11 Aligned_cols=36 Identities=19% Similarity=0.378 Sum_probs=31.8
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCC
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQGGF-KVVLIDNLHNS 40 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~ 40 (335)
+|+|+|.|| |..|...+..|.+.|+ +|+++.+++..
T Consensus 4 ~~kVaIIGa-GpaGl~aA~~l~~~G~~~V~v~E~~~~~ 40 (196)
T d1gtea4 4 SAKIALLGA-GPASISCASFLARLGYSDITIFEKQEYV 40 (196)
T ss_dssp GCCEEEECC-SHHHHHHHHHHHHTTCCCEEEEESSSSC
T ss_pred CCEEEEECC-hHHHHHHHHHHHHCCCCeEEEEEecCcc
Confidence 589999998 9999999999999998 59999886543
|
| >d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: UDP-glucose dehydrogenase (UDPGDH) species: Streptococcus pyogenes [TaxId: 1314]
Probab=95.24 E-value=0.0024 Score=50.02 Aligned_cols=33 Identities=27% Similarity=0.454 Sum_probs=27.2
Q ss_pred CeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCC
Q 019795 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHN 39 (335)
Q Consensus 5 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 39 (335)
|+|.|.| .|++|..++..| ++|++|++++.++.
T Consensus 1 MkI~ViG-lG~vGl~~a~~~-a~g~~V~g~Din~~ 33 (196)
T d1dlja2 1 MKIAVAG-SGYVGLSLGVLL-SLQNEVTIVDILPS 33 (196)
T ss_dssp CEEEEEC-CSHHHHHHHHHH-TTTSEEEEECSCHH
T ss_pred CEEEEEC-CChhHHHHHHHH-HCCCcEEEEECCHH
Confidence 5788888 599999999766 57999999987643
|
| >d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Siroheme synthase N-terminal domain-like domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=95.23 E-value=0.0082 Score=44.61 Aligned_cols=35 Identities=31% Similarity=0.528 Sum_probs=31.6
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecC
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNL 37 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~ 37 (335)
+++|+|||.|| |.+|..-++.|++.|.+|++++..
T Consensus 11 l~gkrvLViGg-G~va~~ka~~Ll~~GA~VtVvap~ 45 (150)
T d1kyqa1 11 LKDKRILLIGG-GEVGLTRLYKLMPTGCKLTLVSPD 45 (150)
T ss_dssp CTTCEEEEEEE-SHHHHHHHHHHGGGTCEEEEEEEE
T ss_pred eCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCC
Confidence 46799999998 999999999999999999999643
|
| >d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Flavin-dependent monoxygenase SPBP16F5.08c species: Schizosaccharomyces pombe [TaxId: 4896]
Probab=95.22 E-value=0.011 Score=50.10 Aligned_cols=38 Identities=24% Similarity=0.294 Sum_probs=33.7
Q ss_pred CCCCCeEEEEcCCChhhHHHHHHHHhCC--CeEEEEecCCC
Q 019795 1 MASEKNILVTGGAGFIGTHCALQLLQGG--FKVVLIDNLHN 39 (335)
Q Consensus 1 ~~~~~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~ 39 (335)
|..||+|+|.|| |.-|..++..|+++| ++|+++.|+..
T Consensus 1 m~~~KrVaIIGa-G~sGl~~A~~L~~~~~~~~v~vfEk~~~ 40 (335)
T d2gv8a1 1 LPTIRKIAIIGA-GPSGLVTAKALLAEKAFDQVTLFERRGS 40 (335)
T ss_dssp CCSCCEEEEECC-SHHHHHHHHHHHTTTCCSEEEEECSSSS
T ss_pred CCCCCeEEEECc-CHHHHHHHHHHHHhCCCCCEEEEECCCC
Confidence 888999999998 999999999998876 69999988643
|
| >d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: 2,4-dienoyl-CoA reductase, middle domain species: Escherichia coli [TaxId: 562]
Probab=95.22 E-value=0.014 Score=44.76 Aligned_cols=36 Identities=31% Similarity=0.446 Sum_probs=32.8
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCC
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHN 39 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 39 (335)
+.|+|+|.|| |..|...+..|.++|++|+++.+.+.
T Consensus 42 ~~k~V~IIGa-GPAGL~AA~~la~~G~~Vtl~E~~~~ 77 (179)
T d1ps9a3 42 QKKNLAVVGA-GPAGLAFAINAAARGHQVTLFDAHSE 77 (179)
T ss_dssp SCCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred CCcEEEEECc-cHHHHHHHHHHHhhccceEEEeccCc
Confidence 5689999998 99999999999999999999988653
|
| >d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=95.21 E-value=0.061 Score=38.84 Aligned_cols=28 Identities=14% Similarity=0.247 Sum_probs=24.0
Q ss_pred eEEEEcCCChhhHHHHHHHHhC-CCeEEE
Q 019795 6 NILVTGGAGFIGTHCALQLLQG-GFKVVL 33 (335)
Q Consensus 6 ~vlItGatG~iG~~l~~~L~~~-g~~V~~ 33 (335)
+|.|.|++|-+|+.+++.+.+. ++++.+
T Consensus 1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~ 29 (135)
T d1yl7a1 1 RVGVLGAKGKVGATMVRAVAAADDLTLSA 29 (135)
T ss_dssp EEEEETTTSHHHHHHHHHHHHSTTSEEEE
T ss_pred CEEEECCCCHHHHHHHHHHHhCCCCEEEE
Confidence 6899999999999999998775 677664
|
| >d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: 6-phosphogluconate dehydrogenase species: Trypanosoma brucei [TaxId: 5691]
Probab=95.19 E-value=0.0056 Score=46.96 Aligned_cols=39 Identities=28% Similarity=0.457 Sum_probs=32.6
Q ss_pred CeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhh
Q 019795 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEA 44 (335)
Q Consensus 5 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~ 44 (335)
|+|-|.|- |-+|..+++.|++.||+|++.+|++.+....
T Consensus 2 MkIGvIGl-G~MG~~ma~~L~~~G~~V~~~dr~~~~~~~l 40 (178)
T d1pgja2 2 MDVGVVGL-GVMGANLALNIAEKGFKVAVFNRTYSKSEEF 40 (178)
T ss_dssp BSEEEECC-SHHHHHHHHHHHHTTCCEEEECSSHHHHHHH
T ss_pred CEEEEEee-hHHHHHHHHHHHHCCCeEEEEECCHHHHHHH
Confidence 57888985 9999999999999999999999865544333
|
| >d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Ubiquitin activating enzymes (UBA) domain: UBA3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.18 E-value=0.021 Score=50.08 Aligned_cols=80 Identities=20% Similarity=0.287 Sum_probs=49.8
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCCc-------------------hhhHHhhhhhcCCccccceeE
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGF-KVVLIDNLHNSV-------------------PEAVDRVKDLAGPELAKKLEF 62 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~-------------------~~~~~~~~~~~~~~~~~~i~~ 62 (335)
++.+|||.|+ |++|.++++.|+..|. ++++++...-.. ..+.+++..+- ..-++..
T Consensus 36 ~~~kVlvvG~-GglG~ei~k~L~~~Gvg~i~lvD~D~Ve~sNL~RQflf~~~diG~~Ka~~a~~~l~~~n---p~v~i~~ 111 (426)
T d1yovb1 36 DTCKVLVIGA-GGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRV---PNCNVVP 111 (426)
T ss_dssp HHCCEEEECS-STTHHHHHHHHHTTTCCCEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHS---TTCCCEE
T ss_pred hcCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEECCCcchhhhcccccCChhHcCcHHHHHHHHHHHhhC---CCCceEe
Confidence 3568999998 7799999999999996 688886643221 11112222211 1134556
Q ss_pred EEccCCCHHHHHHHHhcCCCCEEEEccc
Q 019795 63 HVGDLRNKDDLDKLFSSQKFEAVIHFGA 90 (335)
Q Consensus 63 ~~~Dl~d~~~~~~~~~~~~~d~vi~~a~ 90 (335)
+..++.+.. ..+++ ++|+||.+..
T Consensus 112 ~~~~i~~~~--~~~~~--~~DlVi~~~D 135 (426)
T d1yovb1 112 HFNKIQDFN--DTFYR--QFHIIVCGLD 135 (426)
T ss_dssp ECSCGGGBC--HHHHT--TCSEEEECCS
T ss_pred eeccccchH--HHHHH--hcchheeccC
Confidence 666665432 35676 7899997533
|
| >d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Glycine oxidase ThiO species: Bacillus sp. [TaxId: 1409]
Probab=95.11 E-value=0.0095 Score=48.70 Aligned_cols=32 Identities=28% Similarity=0.404 Sum_probs=29.8
Q ss_pred EEEEcCCChhhHHHHHHHHhCCCeEEEEecCCC
Q 019795 7 ILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHN 39 (335)
Q Consensus 7 vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 39 (335)
|+|.|| |.+|..++..|+++|.+|+++++...
T Consensus 7 vvIIGa-Gi~Gls~A~~La~~G~~V~vlE~~~~ 38 (276)
T d1ryia1 7 AVVIGG-GIIGSAIAYYLAKENKNTALFESGTM 38 (276)
T ss_dssp EEEECC-SHHHHHHHHHHHHTTCCEEEECSSST
T ss_pred EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence 999998 99999999999999999999998643
|
| >d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=95.08 E-value=0.032 Score=41.88 Aligned_cols=37 Identities=19% Similarity=0.168 Sum_probs=31.6
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCC
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNS 40 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~ 40 (335)
++.+|+|.|+ |.+|...++.+...|++|+++++++.+
T Consensus 27 ~g~~VlV~Ga-G~vG~~~~~~ak~~G~~Vi~~~~~~~~ 63 (166)
T d1llua2 27 PGQWVAISGI-GGLGHVAVQYARAMGLHVAAIDIDDAK 63 (166)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHH
T ss_pred CCCEEEEeec-cccHHHHHHHHHHcCCccceecchhhH
Confidence 4678999986 999999999888899999999886443
|
| >d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: S-adenosylhomocystein hydrolase species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]
Probab=95.04 E-value=0.019 Score=42.84 Aligned_cols=70 Identities=19% Similarity=0.246 Sum_probs=50.9
Q ss_pred CCCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcC
Q 019795 1 MASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQ 80 (335)
Q Consensus 1 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~ 80 (335)
|+.+|+++|.|= |.+|+.+++.|...|.+|+++..+|-.. ++... ++.+.. .++++++
T Consensus 20 ~laGk~vvV~GY-G~vGrG~A~~~rg~Ga~V~V~E~DPi~a------lqA~m-----dGf~v~--------~~~~a~~-- 77 (163)
T d1v8ba1 20 LISGKIVVICGY-GDVGKGCASSMKGLGARVYITEIDPICA------IQAVM-----EGFNVV--------TLDEIVD-- 77 (163)
T ss_dssp CCTTSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSCHHHH------HHHHT-----TTCEEC--------CHHHHTT--
T ss_pred eecCCEEEEecc-cccchhHHHHHHhCCCEEEEEecCchhh------HHHHh-----cCCccC--------chhHccc--
Confidence 688999999997 9999999999999999999997754221 11111 233332 2456777
Q ss_pred CCCEEEEccccc
Q 019795 81 KFEAVIHFGALK 92 (335)
Q Consensus 81 ~~d~vi~~a~~~ 92 (335)
..|++|-+.|..
T Consensus 78 ~aDi~vTaTGn~ 89 (163)
T d1v8ba1 78 KGDFFITCTGNV 89 (163)
T ss_dssp TCSEEEECCSSS
T ss_pred cCcEEEEcCCCC
Confidence 679999877764
|
| >d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramate-alanine ligase MurC species: Thermotoga maritima [TaxId: 2336]
Probab=95.04 E-value=0.092 Score=34.83 Aligned_cols=70 Identities=21% Similarity=0.222 Sum_probs=46.6
Q ss_pred CCeEEEEcCCChhhH-HHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCC
Q 019795 4 EKNILVTGGAGFIGT-HCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKF 82 (335)
Q Consensus 4 ~~~vlItGatG~iG~-~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~ 82 (335)
+|+|-++|- |++|. .||+.|.++|+.|.+.|+... ...++|.+ .++.+..+. +++. +. ++
T Consensus 1 ~~~ihfiGI-gG~GMs~LA~~L~~~G~~VsGSD~~~~---~~t~~L~~-------~Gi~i~~gh--~~~~----i~--~~ 61 (89)
T d1j6ua1 1 HMKIHFVGI-GGIGMSAVALHEFSNGNDVYGSNIEET---ERTAYLRK-------LGIPIFVPH--SADN----WY--DP 61 (89)
T ss_dssp CCEEEEETT-TSHHHHHHHHHHHHTTCEEEEECSSCC---HHHHHHHH-------TTCCEESSC--CTTS----CC--CC
T ss_pred CcEEEEEeE-CHHHHHHHHHHHHhCCCeEEEEeCCCC---hhHHHHHH-------CCCeEEeee--cccc----cC--CC
Confidence 367888887 44554 789999999999999998643 33444554 345554431 2221 23 68
Q ss_pred CEEEEccccc
Q 019795 83 EAVIHFGALK 92 (335)
Q Consensus 83 d~vi~~a~~~ 92 (335)
|.||...++.
T Consensus 62 d~vV~SsAI~ 71 (89)
T d1j6ua1 62 DLVIKTPAVR 71 (89)
T ss_dssp SEEEECTTCC
T ss_pred CEEEEecCcC
Confidence 9999988874
|
| >d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=94.91 E-value=0.025 Score=42.75 Aligned_cols=81 Identities=23% Similarity=0.154 Sum_probs=50.8
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccC--CCHHHHHHHHhc
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDL--RNKDDLDKLFSS 79 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl--~d~~~~~~~~~~ 79 (335)
+++|+|+|.|.|.-+|+.|+..|+++|..|.......... .... ... .-......|+ -.++.+++...
T Consensus 27 l~GK~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~~~~~-~~~~--~~~------~~~~~~~~~~~~~~~~~lk~~~~- 96 (171)
T d1edza1 27 LYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQK-FTRG--ESL------KLNKHHVEDLGEYSEDLLKKCSL- 96 (171)
T ss_dssp TTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEE-EESC--CCS------SCCCCEEEEEEECCHHHHHHHHH-
T ss_pred CCCCEEEEECCccccHHHHHHHHHHCCCEEEEeccccccc-cccc--cce------eeeeeccccccccchhHHhhccc-
Confidence 4689999999999999999999999999888665321100 0000 000 0001111222 23556777776
Q ss_pred CCCCEEEEcccccc
Q 019795 80 QKFEAVIHFGALKA 93 (335)
Q Consensus 80 ~~~d~vi~~a~~~~ 93 (335)
..|+||...|...
T Consensus 97 -~aDIvIsavG~p~ 109 (171)
T d1edza1 97 -DSDVVITGVPSEN 109 (171)
T ss_dssp -HCSEEEECCCCTT
T ss_pred -cCCEEEEccCCCc
Confidence 6799998887643
|
| >d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Protoporphyrinogen oxidase species: Tobacco (Nicotiana tabacum) [TaxId: 4097]
Probab=94.83 E-value=0.015 Score=47.93 Aligned_cols=34 Identities=26% Similarity=0.408 Sum_probs=31.2
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCC
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLH 38 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~ 38 (335)
+|+|+|.|| |.-|...+.+|.+.|++|+++.+++
T Consensus 1 ~KkV~IIGa-G~aGL~aA~~La~~G~~V~vlE~~~ 34 (373)
T d1seza1 1 AKRVAVIGA-GVSGLAAAYKLKIHGLNVTVFEAEG 34 (373)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHTTSCEEEEECSSS
T ss_pred CCEEEEECc-CHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 589999998 9999999999999999999998754
|
| >d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Dihydroxypyridine hydroxylase DhpH species: Arthrobacter nicotinovorans [TaxId: 29320]
Probab=94.81 E-value=0.019 Score=46.39 Aligned_cols=36 Identities=28% Similarity=0.414 Sum_probs=32.5
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCC
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHN 39 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 39 (335)
..++|+|.|| |..|..++..|.++|++|+++.|++.
T Consensus 3 ~~~kV~IiGa-G~aGl~~A~~L~~~G~~v~v~Er~~~ 38 (265)
T d2voua1 3 TTDRIAVVGG-SISGLTAALMLRDAGVDVDVYERSPQ 38 (265)
T ss_dssp CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CCCcEEEECc-CHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 5689999998 99999999999999999999987543
|
| >d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Streptococcus pneumoniae [TaxId: 1313]
Probab=94.71 E-value=0.015 Score=43.35 Aligned_cols=24 Identities=21% Similarity=0.400 Sum_probs=21.4
Q ss_pred eEEEEcCCChhhHHHHHHHHhCCC
Q 019795 6 NILVTGGAGFIGTHCALQLLQGGF 29 (335)
Q Consensus 6 ~vlItGatG~iG~~l~~~L~~~g~ 29 (335)
+|.|.||||++|..|++.|.+..+
T Consensus 3 kVaIvGATGyvG~eLirlL~~H~f 26 (154)
T d2gz1a1 3 TVAVVGATGAVGAQMIKMLEESTL 26 (154)
T ss_dssp EEEEETTTSHHHHHHHHHHHTCCS
T ss_pred EEEEECCCcHHHHHHHHHHHcCCC
Confidence 799999999999999999987653
|
| >d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Pyrroline-5-carboxylate reductase ProC species: Neisseria meningitidis, serogroup B [TaxId: 487]
Probab=94.69 E-value=0.009 Score=44.49 Aligned_cols=35 Identities=20% Similarity=0.418 Sum_probs=30.1
Q ss_pred CeEEEEcCCChhhHHHHHHHHhCC-CeEEEEecCCCC
Q 019795 5 KNILVTGGAGFIGTHCALQLLQGG-FKVVLIDNLHNS 40 (335)
Q Consensus 5 ~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~ 40 (335)
|+|.+.|+ |-+|+++++.|++.| ++|.+.+|++..
T Consensus 1 MkI~fIG~-G~MG~ai~~~l~~~~~~~i~v~~r~~~~ 36 (152)
T d1yqga2 1 MNVYFLGG-GNMAAAVAGGLVKQGGYRIYIANRGAEK 36 (152)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHCSCEEEEECSSHHH
T ss_pred CEEEEEcC-cHHHHHHHHHHHHCCCCcEEEEeCChhH
Confidence 57889987 999999999999887 899999887543
|
| >d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Maltose-6'-phosphate glucosidase GlvA species: Bacillus subtilis [TaxId: 1423]
Probab=94.64 E-value=0.15 Score=38.19 Aligned_cols=118 Identities=21% Similarity=0.226 Sum_probs=63.1
Q ss_pred CCCeEEEEcCCChhhHH-HHHHHHhC-----CCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHH
Q 019795 3 SEKNILVTGGAGFIGTH-CALQLLQG-----GFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKL 76 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~-l~~~L~~~-----g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~ 76 (335)
+..+|.|.|| |.+|.. ++..|+.. +-++++++.++.........+.+... ........... .+..++
T Consensus 2 k~~KI~iIGa-Gsv~~~~~~~~ll~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~-~~~~~~~~~~~-----~d~~ea 74 (167)
T d1u8xx1 2 KSFSIVIAGG-GSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIR-EKAPDIEFAAT-----TDPEEA 74 (167)
T ss_dssp CCEEEEEECT-TSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHH-HHCTTSEEEEE-----SCHHHH
T ss_pred CCceEEEECC-ChhhhHHHHHHHHhhhhhcCCCEEEEEcCChhHHHHHHHHHHHHHH-HhCCCcceEec-----CChhhc
Confidence 3457899998 445554 44555542 24899999876655433333332211 00012222221 135566
Q ss_pred HhcCCCCEEEEcccccchhhhhcChHHHHH--------------------HhHHHHHHHHHHHHHcCCC-EEEEec
Q 019795 77 FSSQKFEAVIHFGALKAVAESVQHPFRYFD--------------------NNLIGTINLYQAMAKYNCK-KLVFSS 131 (335)
Q Consensus 77 ~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~--------------------~nv~~~~~l~~~~~~~~~~-~~v~~S 131 (335)
++ +.|+||.+|+.........+ .... -|+.....+++.+++.... .++.+|
T Consensus 75 l~--~AD~Vvitag~~~~~g~~rd--~~i~~~~Gi~~~~t~g~gg~~~~~r~i~ii~~i~~~i~~~~P~A~li~~T 146 (167)
T d1u8xx1 75 FT--DVDFVMAHIRVGKYAMRALD--EQIPLKYGVVGQETCGPGGIAYGMRSIGGVLEILDYMEKYSPDAWMLNYS 146 (167)
T ss_dssp HS--SCSEEEECCCTTHHHHHHHH--HHHHHTTTCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred cC--CCCEEEECCCcCCCCceeHH--HhhchhcCceeeccccCcchheehhhHHHHHHHHHHHHhhCCCeEEEEeC
Confidence 76 78999999998543321111 2221 2455566677777776554 444544
|
| >d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-lactate dehydrogenase species: Lactobacillus helveticus [TaxId: 1587]
Probab=94.57 E-value=0.021 Score=44.42 Aligned_cols=37 Identities=27% Similarity=0.305 Sum_probs=32.3
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCC
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHN 39 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 39 (335)
+.+|+|.|.|- |-||+.+++.|..-|.+|++.++...
T Consensus 41 l~gk~vgIiG~-G~IG~~va~~l~~fg~~V~~~d~~~~ 77 (197)
T d1j4aa1 41 VRDQVVGVVGT-GHIGQVFMQIMEGFGAKVITYDIFRN 77 (197)
T ss_dssp GGGSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred ccCCeEEEecc-cccchhHHHhHhhhcccccccCcccc
Confidence 35789999996 99999999999999999999987543
|
| >d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]
Probab=94.46 E-value=0.021 Score=43.05 Aligned_cols=35 Identities=26% Similarity=0.411 Sum_probs=30.3
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCC--CeEEEEecCC
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGG--FKVVLIDNLH 38 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g--~~V~~~~r~~ 38 (335)
.+|+|+|.|| |++|..++..|.+.+ .+|+++.+.+
T Consensus 1 ~gkrivIvGg-G~~G~e~A~~l~~~~~~~~Vtlie~~~ 37 (186)
T d1fcda1 1 AGRKVVVVGG-GTGGATAAKYIKLADPSIEVTLIEPNT 37 (186)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred CCCcEEEECc-cHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence 4799999998 999999999999987 4788887654
|
| >d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Cod (Gadus callarias) [TaxId: 8053]
Probab=94.20 E-value=0.11 Score=39.07 Aligned_cols=78 Identities=12% Similarity=0.109 Sum_probs=48.5
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCC-CeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEc-cCC-CHHHHHHHHhc
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGG-FKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVG-DLR-NKDDLDKLFSS 79 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-Dl~-d~~~~~~~~~~ 79 (335)
++.+|+|.|+ |.+|...+..+...| .+|+++++++.+.+... +.. --.++.. +-. ..+++.+....
T Consensus 28 ~g~~VlI~G~-Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a~----~~G------Ad~~in~~~~~~~~~~~~~~~~~ 96 (175)
T d1cdoa2 28 PGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAK----VFG------ATDFVNPNDHSEPISQVLSKMTN 96 (175)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH----HTT------CCEEECGGGCSSCHHHHHHHHHT
T ss_pred CCCEEEEEec-CCccchHHHHHHHHhhchheeecchHHHHHHHH----HcC------CcEEEcCCCcchhHHHHHHhhcc
Confidence 4578999997 667777777777776 56888887655433221 111 1123322 221 23456666666
Q ss_pred CCCCEEEEcccc
Q 019795 80 QKFEAVIHFGAL 91 (335)
Q Consensus 80 ~~~d~vi~~a~~ 91 (335)
.++|+++.+.+.
T Consensus 97 ~G~d~vid~~G~ 108 (175)
T d1cdoa2 97 GGVDFSLECVGN 108 (175)
T ss_dssp SCBSEEEECSCC
T ss_pred CCcceeeeecCC
Confidence 689999998876
|
| >d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=94.18 E-value=0.064 Score=40.06 Aligned_cols=37 Identities=19% Similarity=0.166 Sum_probs=31.0
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCC
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNS 40 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~ 40 (335)
++.+|+|.|+ |.+|...++.+...|++|+++++++.+
T Consensus 27 ~g~~vlv~G~-G~iG~~a~~~a~~~g~~v~~~~~~~~r 63 (168)
T d1rjwa2 27 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEK 63 (168)
T ss_dssp TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred CCCEEEEeec-ccchhhhhHHHhcCCCeEeccCCCHHH
Confidence 4678999976 999999999999999999999875443
|
| >d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-glycerate dehydrogenase species: Hyphomicrobium methylovorum [TaxId: 84]
Probab=94.00 E-value=0.056 Score=41.65 Aligned_cols=38 Identities=21% Similarity=0.169 Sum_probs=33.1
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCC
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNS 40 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~ 40 (335)
+.++++.|.|. |-||+.+++.|..-|.+|...++....
T Consensus 45 l~g~tvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~ 82 (191)
T d1gdha1 45 LDNKTLGIYGF-GSIGQALAKRAQGFDMDIDYFDTHRAS 82 (191)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSCCC
T ss_pred ecccceEEeec-ccchHHHHHHHHhhccccccccccccc
Confidence 35799999997 999999999999999999999876554
|
| >d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Diaminopimelic acid dehydrogenase (DAPDH) species: Corynebacterium glutamicum [TaxId: 1718]
Probab=93.97 E-value=0.12 Score=38.70 Aligned_cols=34 Identities=15% Similarity=0.216 Sum_probs=26.5
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhC-CCeEEEEec
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQG-GFKVVLIDN 36 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~-g~~V~~~~r 36 (335)
|+..+|.|.|. |.+|+..++.|.+. +.+++++..
T Consensus 1 M~kirvgiiG~-G~ig~~~~~~l~~~~~~elvav~~ 35 (170)
T d1f06a1 1 MTNIRVAIVGY-GNLGRSVEKLIAKQPDMDLVGIFS 35 (170)
T ss_dssp CCCEEEEEECC-SHHHHHHHHHHTTCSSEEEEEEEE
T ss_pred CCcceEEEECC-hHHHHHHHHHHHhCCCcEEEEEEe
Confidence 34567899995 99999999999875 677776543
|
| >d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Trimethylamine dehydrogenase, middle domain species: Methylophilus methylotrophus, w3a1 [TaxId: 17]
Probab=93.95 E-value=0.039 Score=43.88 Aligned_cols=36 Identities=28% Similarity=0.558 Sum_probs=32.4
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCC
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHN 39 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 39 (335)
..|+|+|.|| |+.|...+..|.++|++|+++.+.+.
T Consensus 48 ~~k~VvIIGa-GpAGl~aA~~l~~~G~~v~l~E~~~~ 83 (233)
T d1djqa3 48 NKDSVLIVGA-GPSGSEAARVLMESGYTVHLTDTAEK 83 (233)
T ss_dssp SCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CCceEEEEcc-cHHHHHHHHHHHHhccceeeEeeccc
Confidence 4589999998 99999999999999999999987654
|
| >d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Phosphoglycerate dehydrogenase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=93.94 E-value=0.04 Score=42.28 Aligned_cols=37 Identities=30% Similarity=0.218 Sum_probs=32.1
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCC
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHN 39 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 39 (335)
+.+|++.|.|. |.||+.+++.|..-|.+|++.++...
T Consensus 42 l~~k~vgiiG~-G~IG~~va~~~~~fg~~v~~~d~~~~ 78 (184)
T d1ygya1 42 IFGKTVGVVGL-GRIGQLVAQRIAAFGAYVVAYDPYVS 78 (184)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECTTSC
T ss_pred ccceeeeeccc-cchhHHHHHHhhhccceEEeecCCCC
Confidence 45789999996 99999999999999999999987543
|
| >d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Cow (Bos taurus) [TaxId: 9913]
Probab=93.91 E-value=0.13 Score=42.03 Aligned_cols=34 Identities=29% Similarity=0.342 Sum_probs=30.3
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEec
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDN 36 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r 36 (335)
+++|+|+|-|- |-+|+++++.|.+.|..|++++-
T Consensus 34 L~gktvaIqGf-GnVG~~~A~~L~e~Gakvv~vsD 67 (293)
T d1hwxa1 34 FGDKTFAVQGF-GNVGLHSMRYLHRFGAKCVAVGE 67 (293)
T ss_dssp STTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEEE
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEEc
Confidence 35789999997 99999999999999999998753
|
| >d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Protoporphyrinogen oxidase species: Myxococcus xanthus [TaxId: 34]
Probab=93.80 E-value=0.026 Score=46.17 Aligned_cols=33 Identities=33% Similarity=0.504 Sum_probs=30.2
Q ss_pred CeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCC
Q 019795 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLH 38 (335)
Q Consensus 5 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~ 38 (335)
|+|+|.|| |.-|...+..|.++|++|+++.+++
T Consensus 1 m~V~IIGa-G~aGL~aA~~L~~~G~~V~vlE~~~ 33 (347)
T d2ivda1 1 MNVAVVGG-GISGLAVAHHLRSRGTDAVLLESSA 33 (347)
T ss_dssp CCEEEECC-BHHHHHHHHHHHTTTCCEEEECSSS
T ss_pred CeEEEECC-CHHHHHHHHHHHhCCCCEEEEecCC
Confidence 57999998 9999999999999999999997754
|
| >d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-2-hydroxyisocaproate dehydrogenase species: Lactobacillus casei [TaxId: 1582]
Probab=93.78 E-value=0.03 Score=43.56 Aligned_cols=36 Identities=25% Similarity=0.265 Sum_probs=32.2
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCC
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHN 39 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 39 (335)
.+|+|.|.|. |-||+.+++.|..-|.+|++.++...
T Consensus 44 ~~ktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~ 79 (199)
T d1dxya1 44 GQQTVGVMGT-GHIGQVAIKLFKGFGAKVIAYDPYPM 79 (199)
T ss_dssp GGSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred cceeeeeeec-ccccccccccccccceeeeccCCccc
Confidence 4689999996 99999999999999999999988644
|
| >d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: p-Hydroxybenzoate hydroxylase, PHBH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=93.78 E-value=0.022 Score=46.83 Aligned_cols=32 Identities=19% Similarity=0.340 Sum_probs=29.7
Q ss_pred eEEEEcCCChhhHHHHHHHHhCCCeEEEEecCC
Q 019795 6 NILVTGGAGFIGTHCALQLLQGGFKVVLIDNLH 38 (335)
Q Consensus 6 ~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~ 38 (335)
+|+|.|| |..|..++..|.+.|++|+++.+.+
T Consensus 4 ~V~IvGa-Gp~Gl~~A~~L~~~G~~v~vlE~~~ 35 (292)
T d1k0ia1 4 QVAIIGA-GPSGLLLGQLLHKAGIDNVILERQT 35 (292)
T ss_dssp SEEEECC-SHHHHHHHHHHHHHTCCEEEECSSC
T ss_pred CEEEECc-CHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 6999998 8999999999999999999998753
|
| >d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: C-terminal domain of adrenodoxin reductase-like domain: Trimethylamine dehydrogenase, C-terminal domain species: Methylophilus methylotrophus, w3a1 [TaxId: 17]
Probab=93.71 E-value=0.12 Score=38.06 Aligned_cols=63 Identities=13% Similarity=0.158 Sum_probs=42.6
Q ss_pred CCeEEEE-cCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCC
Q 019795 4 EKNILVT-GGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKF 82 (335)
Q Consensus 4 ~~~vlIt-GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~ 82 (335)
.+.++|. .++||+|..+++.|++.|++|+++.+.+.-... .|-.....+.+.+.+.++
T Consensus 39 ~~~vvi~d~ggg~ig~e~A~~la~~G~~Vtlv~~~~~~~~~---------------------~~~~~~~~~~~~l~~~GV 97 (156)
T d1djqa2 39 GKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVHLANYM---------------------HFTLEYPNMMRRLHELHV 97 (156)
T ss_dssp CSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSCTTTHH---------------------HHTTCHHHHHHHHHHTTC
T ss_pred CCceEEEecCCChHHHHHHHHHHHcCCeEEEEecCCccccc---------------------cchhHHHHHHHHHhhccc
Confidence 3556665 245999999999999999999999986543221 122344555666665667
Q ss_pred CEEEE
Q 019795 83 EAVIH 87 (335)
Q Consensus 83 d~vi~ 87 (335)
+++.+
T Consensus 98 ~i~~~ 102 (156)
T d1djqa2 98 EELGD 102 (156)
T ss_dssp EEEET
T ss_pred eEEec
Confidence 66654
|
| >d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Acetaldehyde dehydrogenase (acylating) species: Pseudomonas sp. [TaxId: 306]
Probab=93.62 E-value=0.047 Score=40.64 Aligned_cols=38 Identities=18% Similarity=0.189 Sum_probs=26.5
Q ss_pred CCCCCeEEEEcCCChhhHHH-HHHHHhC-CCeEEEE-ecCCC
Q 019795 1 MASEKNILVTGGAGFIGTHC-ALQLLQG-GFKVVLI-DNLHN 39 (335)
Q Consensus 1 ~~~~~~vlItGatG~iG~~l-~~~L~~~-g~~V~~~-~r~~~ 39 (335)
|.+..++.|.| +|.+|+.+ .+.|.+. ..+++++ +|+..
T Consensus 1 M~kkirvaIIG-aG~ig~~~~~~~l~~~~~~el~avas~~~~ 41 (157)
T d1nvmb1 1 MNQKLKVAIIG-SGNIGTDLMIKVLRNAKYLEMGAMVGIDAA 41 (157)
T ss_dssp CCSCEEEEEEC-CSHHHHHHHHHHHHHCSSEEEEEEECSCTT
T ss_pred CCCCcEEEEEc-CcHHHHHHHHHHHhhCCcceEEEEEecchh
Confidence 77778999999 89999975 4555443 4567666 45433
|
| >d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Putidaredoxin reductase species: Pseudomonas putida [TaxId: 303]
Probab=93.62 E-value=0.035 Score=42.07 Aligned_cols=35 Identities=20% Similarity=0.345 Sum_probs=29.9
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCC
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLH 38 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~ 38 (335)
++++|+|.|| |++|-.++..|.+.|.+|.++.+.+
T Consensus 2 ~~~~VvIIGg-G~~G~e~A~~l~~~g~~v~v~~~~~ 36 (185)
T d1q1ra1 2 ANDNVVIVGT-GLAGVEVAFGLRASGWEGNIRLVGD 36 (185)
T ss_dssp CSCEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECS
T ss_pred CCCCEEEECC-cHHHHHHHHHHHHcCCceEEEEecC
Confidence 5789999998 9999999999999998877665544
|
| >d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Hypothetical protein PF0725 species: Pyrococcus furiosus [TaxId: 2261]
Probab=93.60 E-value=0.13 Score=35.99 Aligned_cols=32 Identities=25% Similarity=0.453 Sum_probs=28.4
Q ss_pred CeEEEEcCC---ChhhHHHHHHHHhCCCeEEEEec
Q 019795 5 KNILVTGGA---GFIGTHCALQLLQGGFKVVLIDN 36 (335)
Q Consensus 5 ~~vlItGat---G~iG~~l~~~L~~~g~~V~~~~r 36 (335)
|+|.|.|+| +-.|..+.+.|++.||+|+.+..
T Consensus 2 KsIAVvGaS~~~~k~g~~v~~~L~~~g~~V~pVnP 36 (116)
T d1y81a1 2 RKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNP 36 (116)
T ss_dssp CEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECT
T ss_pred cEEEEEcccCCCCCcHHHHHHHHHHCCCEEEEEcc
Confidence 689999988 67899999999999999888753
|
| >d2dt5a2 c.2.1.12 (A:78-203) Transcriptional repressor Rex, C-terminal domain {Thermus aquaticus [TaxId: 271]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Transcriptional repressor Rex, C-terminal domain domain: Transcriptional repressor Rex, C-terminal domain species: Thermus aquaticus [TaxId: 271]
Probab=93.56 E-value=0.08 Score=37.70 Aligned_cols=96 Identities=10% Similarity=0.005 Sum_probs=57.7
Q ss_pred CCeEEEEcCCChhhHHHHHHHHh-CCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCC
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQ-GGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKF 82 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~-~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~ 82 (335)
..+|+|.|| |-+|+.|++.+.. .|++++++--..++..... + .++.++. .+++.++... .+
T Consensus 3 ~~~v~I~Ga-G~~G~~l~~~l~~~~~~~iv~fiDdd~~k~G~~--I---------~Gi~V~~-----~~~l~~~~~~-~i 64 (126)
T d2dt5a2 3 KWGLCIVGM-GRLGSALADYPGFGESFELRGFFDVDPEKVGRP--V---------RGGVIEH-----VDLLPQRVPG-RI 64 (126)
T ss_dssp CEEEEEECC-SHHHHHHHHCSCCCSSEEEEEEEESCTTTTTCE--E---------TTEEEEE-----GGGHHHHSTT-TC
T ss_pred CceEEEEcC-CHHHHHHHHhHhhcCCcEEEEEEeCchHhcCCE--E---------CCEEEec-----HHHHHHHHhh-cc
Confidence 457999998 9999999998754 4788887643333211100 0 2344443 2345665543 46
Q ss_pred CEEEEcccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEeccccc
Q 019795 83 EAVIHFGALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSSATI 135 (335)
Q Consensus 83 d~vi~~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss~~v 135 (335)
++++-+... ...+.+++.|.+.|++.+..++....
T Consensus 65 ~iai~~i~~------------------~~~~~I~d~l~~~gIk~I~~f~~~~l 99 (126)
T d2dt5a2 65 EIALLTVPR------------------EAAQKAADLLVAAGIKGILNFAPVVL 99 (126)
T ss_dssp CEEEECSCH------------------HHHHHHHHHHHHHTCCEEEECSSSCC
T ss_pred cEEEEeCCH------------------HHHHHHHHHHHHcCCCEEeecCceee
Confidence 655543221 11234777888889988888766443
|
| >d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Phosphoglycerate dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=93.44 E-value=0.11 Score=39.77 Aligned_cols=37 Identities=27% Similarity=0.294 Sum_probs=32.2
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCC
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHN 39 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 39 (335)
+.+++|.|.|- |.||+.+++.|..-|.+|...++...
T Consensus 42 l~~~~vgiiG~-G~IG~~va~~l~~fg~~v~~~d~~~~ 78 (188)
T d1sc6a1 42 ARGKKLGIIGY-GHIGTQLGILAESLGMYVYFYDIENK 78 (188)
T ss_dssp STTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred ccceEEEEeec-ccchhhhhhhcccccceEeecccccc
Confidence 35789999985 99999999999999999999987544
|
| >d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Formate dehydrogenase species: Pseudomonas sp., strain 101 [TaxId: 306]
Probab=93.43 E-value=0.076 Score=40.73 Aligned_cols=38 Identities=13% Similarity=0.064 Sum_probs=33.0
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCC
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNS 40 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~ 40 (335)
+.++++.|.|. |-||+.+++.|..-|.+|...++....
T Consensus 42 l~~~~vgiiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~ 79 (188)
T d2naca1 42 LEAMHVGTVAA-GRIGLAVLRRLAPFDVHLHYTDRHRLP 79 (188)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHGGGTCEEEEECSSCCC
T ss_pred ccccceeeccc-cccchhhhhhhhccCceEEEEeecccc
Confidence 35789999996 999999999999999999999986544
|
| >d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Leucine dehydrogenase species: Bacillus sphaericus [TaxId: 1421]
Probab=93.42 E-value=0.17 Score=39.99 Aligned_cols=35 Identities=23% Similarity=0.200 Sum_probs=31.8
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecC
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNL 37 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~ 37 (335)
+++|+|+|-|- |-+|+++++.|.+.|..|++.+.+
T Consensus 37 l~g~~v~IqG~-GnVG~~~a~~L~~~Gakvv~~d~~ 71 (230)
T d1leha1 37 LEGLAVSVQGL-GNVAKALCKKLNTEGAKLVVTDVN 71 (230)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEeeccc
Confidence 56899999997 999999999999999999988764
|
| >d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: UDP-galactopyranose mutase, N-terminal domain domain: UDP-galactopyranose mutase, N-terminal domain species: Escherichia coli [TaxId: 562]
Probab=93.37 E-value=0.027 Score=46.77 Aligned_cols=35 Identities=26% Similarity=0.493 Sum_probs=31.3
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCC
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHN 39 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 39 (335)
|..|+|.|| |.-|..+|+.|++.|++|.++.+++.
T Consensus 1 M~dv~IIGa-G~sGl~~A~~L~~~g~~V~iiEk~~~ 35 (298)
T d1i8ta1 1 MYDYIIVGS-GLFGAVCANELKKLNKKVLVIEKRNH 35 (298)
T ss_dssp CEEEEEECC-SHHHHHHHHHHGGGTCCEEEECSSSS
T ss_pred CccEEEECC-cHHHHHHHHHHHhCCCcEEEEECCCC
Confidence 558999998 99999999999999999999987544
|
| >d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: L-aminoacid oxidase species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]
Probab=93.30 E-value=0.036 Score=46.11 Aligned_cols=34 Identities=24% Similarity=0.510 Sum_probs=31.1
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCC
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLH 38 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~ 38 (335)
.|+|+|.|| |..|...+..|.++|++|+++.+.+
T Consensus 30 pkkV~IIGa-G~aGLsaA~~L~~~G~~V~vlE~~~ 63 (370)
T d2iida1 30 PKHVVIVGA-GMAGLSAAYVLAGAGHQVTVLEASE 63 (370)
T ss_dssp CCEEEEECC-BHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred CCeEEEECC-CHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 478999998 9999999999999999999998754
|
| >d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Phenylalanine dehydrogenase species: Rhodococcus sp., M4 [TaxId: 1831]
Probab=93.30 E-value=0.058 Score=41.89 Aligned_cols=35 Identities=23% Similarity=0.296 Sum_probs=31.4
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecC
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNL 37 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~ 37 (335)
+++|+|+|-|- |-+|+++++.|.+.|.+|++.+.+
T Consensus 25 L~gk~v~IqG~-G~VG~~~A~~L~~~Gakvvv~d~d 59 (201)
T d1c1da1 25 LDGLTVLVQGL-GAVGGSLASLAAEAGAQLLVADTD 59 (201)
T ss_dssp STTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEecch
Confidence 57899999995 999999999999999999988754
|
| >d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Hypothetical protein PH1109 species: Pyrococcus horikoshii [TaxId: 53953]
Probab=93.25 E-value=0.14 Score=37.13 Aligned_cols=34 Identities=21% Similarity=0.250 Sum_probs=30.2
Q ss_pred CCCeEEEEcCC---ChhhHHHHHHHHhCCCeEEEEec
Q 019795 3 SEKNILVTGGA---GFIGTHCALQLLQGGFKVVLIDN 36 (335)
Q Consensus 3 ~~~~vlItGat---G~iG~~l~~~L~~~g~~V~~~~r 36 (335)
+.|+|.|.|+| +-.|..+++.|.+.||+|+.+..
T Consensus 18 ~~ksIAVVGaS~~~~~~g~~v~~~L~~~g~~v~pVnP 54 (139)
T d2d59a1 18 RYKKIALVGASPKPERDANIVMKYLLEHGYDVYPVNP 54 (139)
T ss_dssp HCCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECT
T ss_pred cCCeEEEEeecCCCCCchHHHHHHHHHCCCEEEEECC
Confidence 35899999998 78999999999999999988854
|
| >d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Pyrobaculum islandicum [TaxId: 2277]
Probab=93.05 E-value=0.25 Score=39.31 Aligned_cols=34 Identities=26% Similarity=0.389 Sum_probs=30.5
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEec
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDN 36 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r 36 (335)
+++++|+|-|. |-+|+++++.|.+.|.+|++++-
T Consensus 29 l~g~~v~IqGf-GnVG~~~a~~L~~~Gakvv~vsD 62 (242)
T d1v9la1 29 IEGKTVAIQGM-GNVGRWTAYWLEKMGAKVIAVSD 62 (242)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEEEC
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEeec
Confidence 46899999996 99999999999999999988763
|
| >d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Trypanothione reductase species: Trypanosoma cruzi [TaxId: 5693]
Probab=93.02 E-value=0.099 Score=36.55 Aligned_cols=35 Identities=26% Similarity=0.270 Sum_probs=28.4
Q ss_pred CCeEEEEcCCChhhHHHHHHHHh---CCCeEEEEecCCC
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQ---GGFKVVLIDNLHN 39 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~---~g~~V~~~~r~~~ 39 (335)
.++++|.|| |++|-.++..|.+ +|.+|+++.+.+.
T Consensus 20 p~~v~ivGg-G~ig~E~A~~l~~l~~~~~~Vtli~~~~~ 57 (117)
T d1aoga2 20 PRRVLTVGG-GFISVEFAGIFNAYKPKDGQVTLCYRGEM 57 (117)
T ss_dssp CSEEEEECS-SHHHHHHHHHHHHHCCTTCEEEEEESSSS
T ss_pred CCeEEEECC-cHHHHHHHHHhhhcccCCcEEEEEeccch
Confidence 378999998 9999999977665 4578999988654
|
| >d2blna2 c.65.1.1 (A:1-203) Polymyxin resistance protein ArnA, N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Formyltransferase superfamily: Formyltransferase family: Formyltransferase domain: Polymyxin resistance protein ArnA, N-terminal domain species: Escherichia coli [TaxId: 562]
Probab=92.92 E-value=0.15 Score=39.47 Aligned_cols=78 Identities=12% Similarity=0.083 Sum_probs=46.5
Q ss_pred CeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCc-----hhhHHhhhhhcCCccccceeEEEc-cCCCHHHHHHHHh
Q 019795 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSV-----PEAVDRVKDLAGPELAKKLEFHVG-DLRNKDDLDKLFS 78 (335)
Q Consensus 5 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-----~~~~~~~~~~~~~~~~~~i~~~~~-Dl~d~~~~~~~~~ 78 (335)
|+|++.|. +-+|..+.+.|.+.|++|.++.-.+... ......+... .++.++.. ++.+++ +.+.+.
T Consensus 1 Mkiv~~~~-~~~g~~~l~~L~~~g~~I~~Vvt~~~~~~~~~~~~~~~~~a~~------~~i~~~~~~~~~~~~-~~~~i~ 72 (203)
T d2blna2 1 MKTVVFAY-HDMGCLGIEALLAAGYEISAIFTHTDNPGEKAFYGSVARLAAE------RGIPVYAPDNVNHPL-WVERIA 72 (203)
T ss_dssp CEEEEEEC-HHHHHHHHHHHHHTTCEEEEEECCCC------CCCCHHHHHHH------HTCCEECCSCCCSHH-HHHHHH
T ss_pred CeEEEEec-CHHHHHHHHHHHHCCCCEEEEEcCCCCCCcccccCHHHHHHHH------cCCcceecccccchh-hhhhhh
Confidence 46777775 6689999999999999987654222111 0111111111 34555543 555544 555666
Q ss_pred cCCCCEEEEccc
Q 019795 79 SQKFEAVIHFGA 90 (335)
Q Consensus 79 ~~~~d~vi~~a~ 90 (335)
...+|.+|-...
T Consensus 73 ~~~~Dlii~~g~ 84 (203)
T d2blna2 73 QLSPDVIFSFYY 84 (203)
T ss_dssp HTCCSEEEEESC
T ss_pred hhcccceeeeec
Confidence 678999987654
|
| >d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Sarcosine oxidase species: Bacillus sp., strain b0618 [TaxId: 1409]
Probab=92.74 E-value=0.052 Score=44.19 Aligned_cols=31 Identities=32% Similarity=0.651 Sum_probs=28.9
Q ss_pred EEEEcCCChhhHHHHHHHHhCCCeEEEEecCC
Q 019795 7 ILVTGGAGFIGTHCALQLLQGGFKVVLIDNLH 38 (335)
Q Consensus 7 vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~ 38 (335)
|+|.|| |..|..++..|+++|++|+++.+..
T Consensus 6 vvIIGa-Gi~Gls~A~~La~~G~~V~viE~~~ 36 (281)
T d2gf3a1 6 VIVVGA-GSMGMAAGYQLAKQGVKTLLVDAFD 36 (281)
T ss_dssp EEEECC-SHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 899998 9999999999999999999998854
|
| >d1s6ya1 c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: 6-phospho-beta-glucosidase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=92.66 E-value=0.1 Score=39.19 Aligned_cols=119 Identities=9% Similarity=0.001 Sum_probs=60.5
Q ss_pred CeEEEEcC-CChhhHHHHHHHHhC----CCeEEEEecCCCCc-hhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHh
Q 019795 5 KNILVTGG-AGFIGTHCALQLLQG----GFKVVLIDNLHNSV-PEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFS 78 (335)
Q Consensus 5 ~~vlItGa-tG~iG~~l~~~L~~~----g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~ 78 (335)
+||.|.|| +.+.+..++..+... .-+++.++.++... .+..+.+...........+... .-+| ..+.++
T Consensus 2 ~KI~iIGaGs~~~~~~~~~l~~~~~~~~~~eI~L~Di~e~~~~~~~~d~~~~~~~~~~~~~~~~~--~~td---~~~al~ 76 (169)
T d1s6ya1 2 LKIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEGKEKLEIVGALAKRMVEKAGVPIEIH--LTLD---RRRALD 76 (169)
T ss_dssp EEEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCCEEE--EESC---HHHHHT
T ss_pred cEEEEECCChhhHHHHHHHHHHhccccCCCEEEEEcCCccHHHHHHHHHHHHHHHHhcCCCceee--ecCC---chhhcC
Confidence 57889997 334455555555543 24888888765431 1112211110000000112211 1223 345566
Q ss_pred cCCCCEEEEcccccchhhhhcChH------------------HHHHHhHHHHHHHHHHHHHcCCCEEEEe
Q 019795 79 SQKFEAVIHFGALKAVAESVQHPF------------------RYFDNNLIGTINLYQAMAKYNCKKLVFS 130 (335)
Q Consensus 79 ~~~~d~vi~~a~~~~~~~~~~~~~------------------~~~~~nv~~~~~l~~~~~~~~~~~~v~~ 130 (335)
+.|+||.+|+.........+.. ....-|+.....+++.+.+.....++..
T Consensus 77 --gaDvVv~ta~~~~~~~~~r~~~i~~~~gi~~~~t~g~~~~~~~~~n~~i~~~i~~~i~~~~pda~~i~ 144 (169)
T d1s6ya1 77 --GADFVTTQFRVGGLEARAKDERIPLKYGVIGQETNGPGGLFKGLRTIPVILDIIRDMEELCPDAWLIN 144 (169)
T ss_dssp --TCSEEEECCCTTHHHHHHHHHHTGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEE
T ss_pred --CCCEEEEccccCCCCCeehhhhhhhhcCceeccccCcchhhhccccHHHHHHHHHHHhhcCCCeEEEE
Confidence 7899999999854322111100 1123577778888888888765544443
|
| >d1yova1 c.111.1.2 (A:6-534) Amyloid beta precursor protein-binding protein 1, APPBP1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Ubiquitin activating enzymes (UBA) domain: Amyloid beta precursor protein-binding protein 1, APPBP1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=92.55 E-value=0.055 Score=48.74 Aligned_cols=34 Identities=18% Similarity=0.266 Sum_probs=28.1
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCC
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQGGF-KVVLIDNLH 38 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~ 38 (335)
..+|+|.|+ |.+|.++++.|+..|. .+++++...
T Consensus 25 ~s~VlvvG~-gglG~Ei~knLvl~GVg~itivD~d~ 59 (529)
T d1yova1 25 SAHVCLINA-TATGTEILKNLVLPGIGSFTIIDGNQ 59 (529)
T ss_dssp HCEEEECCC-SHHHHHHHHHHHTTTCSEEEEECCSB
T ss_pred CCCEEEECC-CHHHHHHHHHHHHhcCCEEEEEcCCc
Confidence 468999997 8899999999999995 577776543
|
| >d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase species: Zymomonas mobilis [TaxId: 542]
Probab=92.46 E-value=0.21 Score=36.50 Aligned_cols=35 Identities=17% Similarity=0.323 Sum_probs=30.0
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhC--CCeEEEEecCC
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQG--GFKVVLIDNLH 38 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~--g~~V~~~~r~~ 38 (335)
+|+|.|.|+||-||.....-+.+. .++|++++-..
T Consensus 2 pK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~~ 38 (150)
T d1r0ka2 2 PRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANR 38 (150)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESS
T ss_pred CcEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEeCC
Confidence 689999999999999999999775 58888886543
|
| >d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: GDI-like N domain domain: Guanine nucleotide dissociation inhibitor, GDI species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=92.16 E-value=0.075 Score=41.80 Aligned_cols=33 Identities=27% Similarity=0.298 Sum_probs=29.8
Q ss_pred CeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCC
Q 019795 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLH 38 (335)
Q Consensus 5 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~ 38 (335)
=-|+|.|| |.-|...|..|+++|++|.++.+++
T Consensus 6 yDviViGa-G~~Gl~~A~~La~~G~~V~vlE~~~ 38 (297)
T d2bcgg1 6 YDVIVLGT-GITECILSGLLSVDGKKVLHIDKQD 38 (297)
T ss_dssp CSEEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEECc-CHHHHHHHHHHHHCCCCEEEEcCCC
Confidence 34899997 9999999999999999999998864
|
| >d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: N,N-dimethylglycine oxidase species: Arthrobacter globiformis [TaxId: 1665]
Probab=92.00 E-value=0.069 Score=44.00 Aligned_cols=32 Identities=28% Similarity=0.612 Sum_probs=29.0
Q ss_pred eEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCC
Q 019795 6 NILVTGGAGFIGTHCALQLLQGGF-KVVLIDNLH 38 (335)
Q Consensus 6 ~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~ 38 (335)
.|+|.|| |.+|..++..|+++|+ +|++++|+.
T Consensus 3 dViIIGa-Gi~G~s~A~~La~~G~~~V~liE~~~ 35 (305)
T d1pj5a2 3 RIVIIGA-GIVGTNLADELVTRGWNNITVLDQGP 35 (305)
T ss_dssp CEEEECC-SHHHHHHHHHHHHTTCCCEEEECSSC
T ss_pred CEEEECc-CHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence 6999998 9999999999999996 699998864
|
| >d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Trypanothione reductase species: Crithidia fasciculata [TaxId: 5656]
Probab=91.97 E-value=0.12 Score=36.12 Aligned_cols=35 Identities=29% Similarity=0.252 Sum_probs=29.3
Q ss_pred CCeEEEEcCCChhhHHHHHHHHh---CCCeEEEEecCCC
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQ---GGFKVVLIDNLHN 39 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~---~g~~V~~~~r~~~ 39 (335)
.++++|.|| |++|-.++..|.+ .|.+|+++.|.+.
T Consensus 18 p~~v~IiGg-G~ig~E~A~~l~~~~~~g~~Vtli~~~~~ 55 (117)
T d1feca2 18 PKRALCVGG-GYISIEFAGIFNAYKARGGQVDLAYRGDM 55 (117)
T ss_dssp CSEEEEECS-SHHHHHHHHHHHHHSCTTCEEEEEESSSS
T ss_pred CCeEEEECC-ChHHHHHHHHhHhhcccccccceeccccc
Confidence 378999998 9999999987655 4899999988654
|
| >d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Lysine-specific histone demethylase 1, LSD1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=91.84 E-value=0.098 Score=43.34 Aligned_cols=34 Identities=26% Similarity=0.436 Sum_probs=30.3
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecC
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNL 37 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~ 37 (335)
+.++|+|.|| |.-|...+..|.+.|++|+++-.+
T Consensus 4 ~~~kViVIGa-G~aGL~aA~~L~~~G~~V~VlEa~ 37 (449)
T d2dw4a2 4 KTGKVIIIGS-GVSGLAAARQLQSFGMDVTLLEAR 37 (449)
T ss_dssp CCCEEEEECC-BHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CCCcEEEECC-CHHHHHHHHHHHhCCCCEEEEeCC
Confidence 4567999998 999999999999999999998554
|
| >d1d7ya1 c.3.1.5 (A:5-115,A:237-308) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent ferredoxin reductase, BphA4 species: Pseudomonas sp., KKS102 [TaxId: 306]
Probab=91.73 E-value=0.043 Score=41.67 Aligned_cols=33 Identities=18% Similarity=0.340 Sum_probs=26.9
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEec
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDN 36 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r 36 (335)
|.++|+|.|| |++|-.++..|.+.|.++.++.+
T Consensus 2 m~a~VvIIGg-G~~G~e~A~~l~~~g~~v~i~~~ 34 (183)
T d1d7ya1 2 LKAPVVVLGA-GLASVSFVAELRQAGYQGLITVV 34 (183)
T ss_dssp CCSSEEEECC-SHHHHHHHHHHHHHTCCSCEEEE
T ss_pred CCCCEEEECc-cHHHHHHHHHHHhcCCceEEEEE
Confidence 4567999997 99999999999998877655443
|
| >d1nhpa1 c.3.1.5 (A:1-119,A:243-321) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH peroxidase species: Enterococcus faecalis [TaxId: 1351]
Probab=91.21 E-value=0.11 Score=39.90 Aligned_cols=33 Identities=15% Similarity=0.182 Sum_probs=28.3
Q ss_pred CeEEEEcCCChhhHHHHHHHHhC--CCeEEEEecCC
Q 019795 5 KNILVTGGAGFIGTHCALQLLQG--GFKVVLIDNLH 38 (335)
Q Consensus 5 ~~vlItGatG~iG~~l~~~L~~~--g~~V~~~~r~~ 38 (335)
|+|+|.|| |++|-.++..|.+. +.+|+++.|.+
T Consensus 1 ~KVvIIGg-G~~G~e~A~~l~~~~~~~~V~v~~~~~ 35 (198)
T d1nhpa1 1 MKVIVLGS-SHGGYEAVEELLNLHPDAEIQWYEKGD 35 (198)
T ss_dssp CEEEEECS-SHHHHHHHHHHHHHCTTSEEEEEESSS
T ss_pred CEEEEECC-cHHHHHHHHHHHhcCCCCeEEEEeCCC
Confidence 58999998 99999999999886 46788888754
|
| >d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Probab=90.72 E-value=0.3 Score=36.82 Aligned_cols=33 Identities=27% Similarity=0.388 Sum_probs=27.4
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhC-CCeEEEEecC
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQG-GFKVVLIDNL 37 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~-g~~V~~~~r~ 37 (335)
|-+|.|-| .|-||+.+++.|.++ +.+|+++.-.
T Consensus 1 MIKVaING-fGRIGR~v~Ral~~~~dievVaInd~ 34 (178)
T d1b7go1 1 MVNVAVNG-YGTIGKRVADAIIKQPDMKLVGVAKT 34 (178)
T ss_dssp CEEEEEEC-CSHHHHHHHHHHHTCTTEEEEEEECS
T ss_pred CeEEEEEC-CCHHHHHHHHHHHhCCCCEEEEEECC
Confidence 55899999 599999999999987 5788887543
|
| >d1m6ia2 c.3.1.5 (A:264-400) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Apoptosis-inducing factor (AIF) species: Human (Homo sapiens) [TaxId: 9606]
Probab=90.65 E-value=0.14 Score=36.83 Aligned_cols=35 Identities=31% Similarity=0.453 Sum_probs=29.0
Q ss_pred CCeEEEEcCCChhhHHHHHHHHh----CCCeEEEEecCCC
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQ----GGFKVVLIDNLHN 39 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~----~g~~V~~~~r~~~ 39 (335)
.++++|.|| |++|-.++..|.+ .|.+|+.+.+.+.
T Consensus 37 ~k~i~IvGg-G~~G~E~A~~l~~~~~~~g~~Vt~i~~~~~ 75 (137)
T d1m6ia2 37 VKSITIIGG-GFLGSELACALGRKARALGTEVIQLFPEKG 75 (137)
T ss_dssp CSEEEEECC-SHHHHHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred CCEEEEECC-CHHHHHHHHHHHHHHHhcCCEEEEeccccc
Confidence 478999998 9999999998853 5899999987554
|
| >d1kifa1 c.4.1.2 (A:1-194,A:288-339) D-aminoacid oxidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: D-aminoacid oxidase, N-terminal domain domain: D-aminoacid oxidase, N-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=90.64 E-value=0.018 Score=45.88 Aligned_cols=27 Identities=30% Similarity=0.443 Sum_probs=24.1
Q ss_pred CeEEEEcCCChhhHHHHHHHHhCCCeEE
Q 019795 5 KNILVTGGAGFIGTHCALQLLQGGFKVV 32 (335)
Q Consensus 5 ~~vlItGatG~iG~~l~~~L~~~g~~V~ 32 (335)
|+|+|.|| |.+|...+..|+++|++|+
T Consensus 1 mkV~VIGa-Gi~GlstA~~L~~~G~~v~ 27 (246)
T d1kifa1 1 MRVVVIGA-GVIGLSTALCIHERYHSVL 27 (246)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHHTTTS
T ss_pred CEEEEECc-hHHHHHHHHHHHHCCCCce
Confidence 57999998 9999999999999997643
|
| >d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Monooxygenase PhzS species: Pseudomonas aeruginosa [TaxId: 287]
Probab=90.57 E-value=0.17 Score=40.67 Aligned_cols=34 Identities=41% Similarity=0.719 Sum_probs=29.9
Q ss_pred CeEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCC
Q 019795 5 KNILVTGGAGFIGTHCALQLLQGGF-KVVLIDNLHN 39 (335)
Q Consensus 5 ~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~ 39 (335)
.+|+|.|| |..|..++..|.+.|. .|+++.+.+.
T Consensus 2 ~~V~IvGa-G~aGl~~A~~L~~~Gi~~V~V~Er~~~ 36 (288)
T d3c96a1 2 IDILIAGA-GIGGLSCALALHQAGIGKVTLLESSSE 36 (288)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESSSS
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCCCeEEEEeCCCC
Confidence 58999998 9999999999999995 8889988643
|
| >d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Polyamine oxidase species: Maize (Zea mays) [TaxId: 4577]
Probab=90.41 E-value=0.13 Score=40.72 Aligned_cols=32 Identities=22% Similarity=0.564 Sum_probs=28.8
Q ss_pred eEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCC
Q 019795 6 NILVTGGAGFIGTHCALQLLQGGF-KVVLIDNLH 38 (335)
Q Consensus 6 ~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~ 38 (335)
+|+|.|| |.-|...+..|.++|+ +|+++.+++
T Consensus 2 ~V~IIGa-G~aGL~aA~~L~~~G~~~V~vlE~~~ 34 (347)
T d1b5qa1 2 RVIVVGA-GMSGISAAKRLSEAGITDLLILEATD 34 (347)
T ss_dssp CEEEECC-BHHHHHHHHHHHHTTCCCEEEECSSS
T ss_pred CEEEECC-cHHHHHHHHHHHhCCCCcEEEEECCC
Confidence 6999998 9999999999999996 699998754
|
| >d1xhca1 c.3.1.5 (A:1-103,A:226-289) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH oxidase /nitrite reductase species: Pyrococcus furiosus [TaxId: 2261]
Probab=90.19 E-value=0.16 Score=37.57 Aligned_cols=31 Identities=29% Similarity=0.402 Sum_probs=26.8
Q ss_pred eEEEEcCCChhhHHHHHHHHhCCCeEEEEecCC
Q 019795 6 NILVTGGAGFIGTHCALQLLQGGFKVVLIDNLH 38 (335)
Q Consensus 6 ~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~ 38 (335)
+|+|.|| |++|-.++..|. ++.+|+++.+.+
T Consensus 2 rVvIIGg-G~~G~e~A~~l~-~~~~Vtvv~~~~ 32 (167)
T d1xhca1 2 KVVIVGN-GPGGFELAKQLS-QTYEVTVIDKEP 32 (167)
T ss_dssp EEEEECC-SHHHHHHHHHHT-TTSEEEEECSSS
T ss_pred eEEEECC-cHHHHHHHHHHH-cCCCEEEEeccc
Confidence 7899998 999999999995 478999998754
|
| >d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=90.03 E-value=2.1 Score=31.67 Aligned_cols=33 Identities=21% Similarity=0.317 Sum_probs=26.8
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhC-CCeEEEEec
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQG-GFKVVLIDN 36 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~-g~~V~~~~r 36 (335)
|.++|.|-|- |-||+.+++.|..+ ..+++++.-
T Consensus 1 M~irIaINGf-GRIGR~v~Ral~~~~dieiVaINd 34 (172)
T d2czca2 1 MKVKVGVNGY-GTIGKRVAYAVTKQDDMELIGITK 34 (172)
T ss_dssp CCEEEEEECC-SHHHHHHHHHHHTCTTEEEEEEEE
T ss_pred CcEEEEEECC-CHHHHHHHHHHHhCCCceEEEEec
Confidence 4568999996 99999999999876 477777653
|
| >d1gtma1 c.2.1.7 (A:181-419) Glutamate dehydrogenase {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=89.38 E-value=0.73 Score=36.39 Aligned_cols=34 Identities=29% Similarity=0.371 Sum_probs=29.0
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhC-CCeEEEEec
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQG-GFKVVLIDN 36 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~-g~~V~~~~r 36 (335)
+++|+|+|-|. |-+|+++++.|.+. |..|++++-
T Consensus 30 l~g~~v~IqGf-GnVG~~~a~~L~~~~G~kvv~vsD 64 (239)
T d1gtma1 30 LKGKTIAIQGY-GNAGYYLAKIMSEDFGMKVVAVSD 64 (239)
T ss_dssp STTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred cCCCEEEEECC-CHHHHHHHHHHHHhcCcceeeccc
Confidence 46799999997 99999999999864 899888753
|
| >d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=89.26 E-value=0.74 Score=33.54 Aligned_cols=34 Identities=15% Similarity=0.115 Sum_probs=26.8
Q ss_pred eEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCc
Q 019795 6 NILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSV 41 (335)
Q Consensus 6 ~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~ 41 (335)
+|-+.|- |.+|+.+++.|++.|+.+ +.+|.+++.
T Consensus 2 kIg~IGl-G~MG~~ma~~L~~~g~~~-~~~~~~~~~ 35 (156)
T d2cvza2 2 KVAFIGL-GAMGYPMAGHLARRFPTL-VWNRTFEKA 35 (156)
T ss_dssp CEEEECC-STTHHHHHHHHHTTSCEE-EECSSTHHH
T ss_pred eEEEEeH-HHHHHHHHHHHHhCCCEE-EEeCCHHHH
Confidence 5788886 999999999999988865 466654443
|
| >d1up7a1 c.2.1.5 (A:1-162) 6-phospho-beta-glucosidase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: 6-phospho-beta-glucosidase species: Thermotoga maritima [TaxId: 2336]
Probab=89.17 E-value=1.9 Score=31.56 Aligned_cols=77 Identities=22% Similarity=0.169 Sum_probs=43.4
Q ss_pred CeEEEEcCCChhhHHHHHH-HHh-C----CCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHh
Q 019795 5 KNILVTGGAGFIGTHCALQ-LLQ-G----GFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFS 78 (335)
Q Consensus 5 ~~vlItGatG~iG~~l~~~-L~~-~----g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~ 78 (335)
|||.|.|| |-+|..++-. |++ . +.+++.++.++.+.....+....... ....... +. +..+.++
T Consensus 1 mKIaiIGa-Gs~g~~~~~~~l~~~~~~~~~~el~L~Did~~k~~~~~d~~~~~~~----~~~~~~~---t~--~~~~~l~ 70 (162)
T d1up7a1 1 MRIAVIGG-GSSYTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVVDFVKRLVK----DRFKVLI---SD--TFEGAVV 70 (162)
T ss_dssp CEEEEETT-TCTTHHHHHHHHHHHTTTSCCCEEEEECSCHHHHHHHHHHHHHHHT----TSSEEEE---CS--SHHHHHT
T ss_pred CEEEEECC-CHHHHHHHHHHHHhcccccCccEEEEEecCcHHHHHHHHHHHhhhc----cCceEEE---ec--CcccccC
Confidence 57999998 5467665533 332 1 36899999876654433332222222 1222221 11 1234555
Q ss_pred cCCCCEEEEcccccc
Q 019795 79 SQKFEAVIHFGALKA 93 (335)
Q Consensus 79 ~~~~d~vi~~a~~~~ 93 (335)
+.|+||..|+...
T Consensus 71 --~aDvVVita~~~~ 83 (162)
T d1up7a1 71 --DAKYVIFQFRPGG 83 (162)
T ss_dssp --TCSEEEECCCTTH
T ss_pred --CCCEEEEecccCC
Confidence 7899999999753
|
| >d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Clostridium symbiosum [TaxId: 1512]
Probab=89.06 E-value=0.18 Score=40.52 Aligned_cols=33 Identities=24% Similarity=0.244 Sum_probs=29.9
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEe
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLID 35 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~ 35 (335)
+++|+|+|.|. |-+|+++++.|.+.|..|++++
T Consensus 34 l~g~~v~IQGf-GnVG~~~a~~L~e~Gakvvavs 66 (255)
T d1bgva1 34 LVGKTVALAGF-GNVAWGAAKKLAELGAKAVTLS 66 (255)
T ss_dssp STTCEEEECCS-SHHHHHHHHHHHHHTCEEEEEE
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEe
Confidence 46799999995 9999999999999999998875
|
| >d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Monoamine oxidase B species: Human (Homo sapiens) [TaxId: 9606]
Probab=88.96 E-value=0.2 Score=41.61 Aligned_cols=31 Identities=32% Similarity=0.608 Sum_probs=28.6
Q ss_pred EEEEcCCChhhHHHHHHHHhCCCeEEEEecCC
Q 019795 7 ILVTGGAGFIGTHCALQLLQGGFKVVLIDNLH 38 (335)
Q Consensus 7 vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~ 38 (335)
|+|.|| |.-|...+..|.++|++|+++.+++
T Consensus 2 ViVIGa-G~aGL~aA~~L~~~G~~V~VlE~~~ 32 (383)
T d2v5za1 2 VVVVGG-GISGMAAAKLLHDSGLNVVVLEARD 32 (383)
T ss_dssp EEEECC-BHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred EEEECC-CHHHHHHHHHHHhCCCCEEEEecCC
Confidence 789998 9999999999999999999998754
|
| >d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Phenylacetone monooxygenase species: Thermobifida fusca [TaxId: 2021]
Probab=88.69 E-value=0.22 Score=41.01 Aligned_cols=34 Identities=29% Similarity=0.456 Sum_probs=30.5
Q ss_pred CeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCC
Q 019795 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHN 39 (335)
Q Consensus 5 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 39 (335)
-.|+|.|| |+.|..++..|.+.|.+|+++.+.+.
T Consensus 8 ~dV~IIGA-G~sGl~~a~~L~~~G~~v~i~Ek~~~ 41 (298)
T d1w4xa1 8 VDVLVVGA-GFSGLYALYRLRELGRSVHVIETAGD 41 (298)
T ss_dssp EEEEEECC-SHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred CCEEEECc-cHHHHHHHHHHHhCCCCEEEEEcCCC
Confidence 36999998 99999999999999999999987644
|
| >d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: HI0933 N-terminal domain-like domain: Flavoprotein BC4706 species: Bacillus cereus [TaxId: 1396]
Probab=88.66 E-value=0.22 Score=39.44 Aligned_cols=34 Identities=29% Similarity=0.495 Sum_probs=30.5
Q ss_pred eEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCC
Q 019795 6 NILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNS 40 (335)
Q Consensus 6 ~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~ 40 (335)
-|+|.|| |..|..++..|++.|++|+++.+.+..
T Consensus 4 DViIIGa-G~aGl~aA~~la~~G~~V~liEk~~~~ 37 (251)
T d2i0za1 4 DVIVIGG-GPSGLMAAIGAAEEGANVLLLDKGNKL 37 (251)
T ss_dssp SEEEECC-SHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CEEEECc-CHHHHHHHHHHHHCCCcEEEEeCCCCC
Confidence 4899998 999999999999999999999886543
|
| >d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933 {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: HI0933 N-terminal domain-like domain: Hypothetical protein HI0933 species: Haemophilus influenzae [TaxId: 727]
Probab=88.64 E-value=0.15 Score=40.67 Aligned_cols=39 Identities=31% Similarity=0.435 Sum_probs=33.2
Q ss_pred CCCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCC
Q 019795 1 MASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNS 40 (335)
Q Consensus 1 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~ 40 (335)
|-+...|+|.|| |..|...+..|.++|.+|.++.+.+..
T Consensus 1 M~~~~DViIIGa-G~aGl~aA~~la~~G~~V~vlEk~~~~ 39 (253)
T d2gqfa1 1 MSQYSENIIIGA-GAAGLFCAAQLAKLGKSVTVFDNGKKI 39 (253)
T ss_dssp CEEECSEEEECC-SHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CCCCCcEEEECc-CHHHHHHHHHHHHCCCcEEEEecCCCC
Confidence 444456999998 999999999999999999999886543
|
| >d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Flavin-dependent monoxygenase SPBP16F5.08c species: Schizosaccharomyces pombe [TaxId: 4896]
Probab=88.02 E-value=0.22 Score=34.05 Aligned_cols=37 Identities=16% Similarity=0.124 Sum_probs=30.4
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCC
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHN 39 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 39 (335)
+++|+|+|.|+ |.-|..++..|++.+-+++.+.|+..
T Consensus 30 f~gK~VlVVG~-g~Sa~dia~~l~~~ak~v~~~~~r~~ 66 (107)
T d2gv8a2 30 FVGESVLVVGG-ASSANDLVRHLTPVAKHPIYQSLLGG 66 (107)
T ss_dssp GTTCCEEEECS-SHHHHHHHHHHTTTSCSSEEEECTTC
T ss_pred cCCCeEEEECC-CCCHHHHHHHHHHhcCEEEEEEecCc
Confidence 36899999997 99999999999988777766666543
|
| >d1gtea3 c.3.1.1 (A:288-440) Dihydropyrimidine dehydrogenase, domain 3 {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: C-terminal domain of adrenodoxin reductase-like domain: Dihydropyrimidine dehydrogenase, domain 3 species: Pig (Sus scrofa) [TaxId: 9823]
Probab=87.97 E-value=0.34 Score=35.51 Aligned_cols=34 Identities=26% Similarity=0.386 Sum_probs=28.6
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhCCCe-EEEEecCC
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQGGFK-VVLIDNLH 38 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~g~~-V~~~~r~~ 38 (335)
.++|+|.|| |..|...+..+.+.|.+ |+++.|..
T Consensus 45 ~~kVvVIGG-GdtA~D~A~~a~r~GA~~V~vi~rr~ 79 (153)
T d1gtea3 45 RGAVIVLGA-GDTAFDCATSALRCGARRVFLVFRKG 79 (153)
T ss_dssp CSEEEEECS-SHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred CCEEEEECC-ChhHHHHHHHHHHcCCcceeEEEeCC
Confidence 468999997 99999999999999865 77777653
|
| >d1p9oa_ c.72.3.1 (A:) Phosphopantothenoylcysteine synthetase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: CoaB-like family: CoaB-like domain: Phosphopantothenoylcysteine synthetase species: Human (Homo sapiens) [TaxId: 9606]
Probab=87.35 E-value=0.54 Score=38.38 Aligned_cols=26 Identities=23% Similarity=0.413 Sum_probs=23.3
Q ss_pred CCChhhHHHHHHHHhCCCeEEEEecC
Q 019795 12 GAGFIGTHCALQLLQGGFKVVLIDNL 37 (335)
Q Consensus 12 atG~iG~~l~~~L~~~g~~V~~~~r~ 37 (335)
.||-.|.+|+++|+.+|++|+.+.+.
T Consensus 44 SSGk~G~alA~~~~~~Ga~V~li~g~ 69 (290)
T d1p9oa_ 44 SSGRRGATSAEAFLAAGYGVLFLYRA 69 (290)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEEEET
T ss_pred CchHHHHHHHHHHHHcCCEEEEEecC
Confidence 36899999999999999999999764
|
| >d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=87.27 E-value=1.3 Score=34.65 Aligned_cols=33 Identities=33% Similarity=0.425 Sum_probs=28.3
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHh-CCCeEEEEe
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQ-GGFKVVLID 35 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~-~g~~V~~~~ 35 (335)
+++++|+|-|- |-+|+++++.|.+ .|..|++++
T Consensus 29 l~g~~vaIqG~-GnVG~~~a~~L~~e~Ga~vv~vs 62 (234)
T d1b26a1 29 PKKATVAVQGF-GNVGQFAALLISQELGSKVVAVS 62 (234)
T ss_dssp TTTCEEEEECC-SHHHHHHHHHHHHHHCCEEEEEE
T ss_pred cCCCEEEEECC-CHHHHHHHHHHHHhcCCceEEee
Confidence 46789999985 9999999999975 599998875
|
| >d2bw0a2 c.65.1.1 (A:1-203) 10-formyltetrahydrofolate dehydrogenase domain 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Formyltransferase superfamily: Formyltransferase family: Formyltransferase domain: 10-formyltetrahydrofolate dehydrogenase domain 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=86.82 E-value=0.84 Score=35.01 Aligned_cols=30 Identities=27% Similarity=0.331 Sum_probs=25.3
Q ss_pred CeEEEEcCCChhhHHHHHHHHhCCCeEEEEe
Q 019795 5 KNILVTGGAGFIGTHCALQLLQGGFKVVLID 35 (335)
Q Consensus 5 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~ 35 (335)
|+|++.|. +..|..+.+.|.++|++|+++.
T Consensus 1 MkI~~~G~-~~~~~~~l~~L~~~~~~i~~V~ 30 (203)
T d2bw0a2 1 MKIAVIGQ-SLFGQEVYCHLRKEGHEVVGVF 30 (203)
T ss_dssp CEEEEECC-HHHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEEcC-CHHHHHHHHHHHHCCCcEEEEE
Confidence 57888875 7889999999999999988654
|
| >d1cp2a_ c.37.1.10 (A:) Nitrogenase iron protein {Clostridium pasteurianum [TaxId: 1501]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Nitrogenase iron protein-like domain: Nitrogenase iron protein species: Clostridium pasteurianum [TaxId: 1501]
Probab=86.64 E-value=0.29 Score=39.37 Aligned_cols=36 Identities=17% Similarity=0.234 Sum_probs=30.2
Q ss_pred CCeEEEEcCCChhhHH-----HHHHHHhCCCeEEEEecCCCC
Q 019795 4 EKNILVTGGAGFIGTH-----CALQLLQGGFKVVLIDNLHNS 40 (335)
Q Consensus 4 ~~~vlItGatG~iG~~-----l~~~L~~~g~~V~~~~r~~~~ 40 (335)
||+|.|+| -|++|+. |+..|++.|++|.++|.++..
T Consensus 1 mr~Iai~g-KGGvGKTT~a~nLA~~LA~~G~rVllID~D~q~ 41 (269)
T d1cp2a_ 1 MRQVAIYG-KGGIGKSTTTQNLTSGLHAMGKTIMVVGCDPKA 41 (269)
T ss_dssp CEEEEEEE-CTTSSHHHHHHHHHHHHHTTTCCEEEEEECTTS
T ss_pred CCEEEEEC-CCcCCHHHHHHHHHHHHHhCCCcEEEEecCCCC
Confidence 68899998 7888875 677899999999999987653
|
| >d1fmta2 c.65.1.1 (A:1-206) Methionyl-tRNAfmet formyltransferase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Formyltransferase superfamily: Formyltransferase family: Formyltransferase domain: Methionyl-tRNAfmet formyltransferase species: Escherichia coli [TaxId: 562]
Probab=86.63 E-value=2.2 Score=32.43 Aligned_cols=83 Identities=17% Similarity=0.111 Sum_probs=49.5
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHh-----hhhhcCCccccceeEEEccCCCHHHHHHHHh
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDR-----VKDLAGPELAKKLEFHVGDLRNKDDLDKLFS 78 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-----~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~ 78 (335)
.|+|++.|. +..+..+.+.|.+.|++|.++.-.+......... ..... ...++.....+..+.+...+.++
T Consensus 3 ~mKI~f~G~-~~~~~~~L~~L~~~~~~i~~Vit~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 78 (206)
T d1fmta2 3 SLRIIFAGT-PDFAARHLDALLSSGHNVVGVFTQPDRPAGRGKKLMPSPVKVLA---EEKGLPVFQPVSLRPQENQQLVA 78 (206)
T ss_dssp CCEEEEEEC-SHHHHHHHHHHHHTTCEEEEEECCCCBC------CBCCHHHHHH---HHTTCCEECCSCSCSHHHHHHHH
T ss_pred CcEEEEECC-CHHHHHHHHHHHhCCCCEEEEEeCCCcccccCccccccchhhhh---hccCccccccccccchhhHHHHh
Confidence 467888874 7889999999999999977654322211100000 00000 01345566666656666777787
Q ss_pred cCCCCEEEEccc
Q 019795 79 SQKFEAVIHFGA 90 (335)
Q Consensus 79 ~~~~d~vi~~a~ 90 (335)
...+|+++-+..
T Consensus 79 ~~~~d~~v~~~~ 90 (206)
T d1fmta2 79 ELQADVMVVVAY 90 (206)
T ss_dssp HTTCSEEEEESC
T ss_pred hhcceEEEeecc
Confidence 778998876544
|
| >d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Thermotoga maritima [TaxId: 2336]
Probab=86.40 E-value=0.66 Score=35.89 Aligned_cols=80 Identities=15% Similarity=0.136 Sum_probs=48.9
Q ss_pred CCCeEEEEcC-CChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCC
Q 019795 3 SEKNILVTGG-AGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQK 81 (335)
Q Consensus 3 ~~~~vlItGa-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~ 81 (335)
++.+||-.|+ ||+....+++.+ ..+..|++++.++.....+...+.+..- .++.++.+|..+. ......
T Consensus 75 ~g~~VLdiG~GtG~~s~~la~~~-~~~g~V~~id~~~~~~~~a~~~~~~~~~----~n~~~~~~d~~~~-----~~~~~~ 144 (213)
T d1dl5a1 75 KGMRVLEIGGGTGYNAAVMSRVV-GEKGLVVSVEYSRKICEIAKRNVERLGI----ENVIFVCGDGYYG-----VPEFSP 144 (213)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHH-CTTCEEEEEESCHHHHHHHHHHHHHTTC----CSEEEEESCGGGC-----CGGGCC
T ss_pred ccceEEEecCccchhHHHHHHHh-CCCCcEEEeecchhhHHHhhhhHhhhcc----cccccccCchHHc-----cccccc
Confidence 4568887775 444444444444 4456899999876655555555544322 5677788876542 223346
Q ss_pred CCEEEEccccc
Q 019795 82 FEAVIHFGALK 92 (335)
Q Consensus 82 ~d~vi~~a~~~ 92 (335)
+|.|+-.++..
T Consensus 145 fD~I~~~~~~~ 155 (213)
T d1dl5a1 145 YDVIFVTVGVD 155 (213)
T ss_dssp EEEEEECSBBS
T ss_pred hhhhhhhccHH
Confidence 89998877653
|
| >d1cjca2 c.4.1.1 (A:6-106,A:332-460) Adrenodoxin reductase of mitochondrial p450 systems {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Adrenodoxin reductase of mitochondrial p450 systems species: Cow (Bos taurus) [TaxId: 9913]
Probab=85.50 E-value=0.4 Score=37.33 Aligned_cols=34 Identities=26% Similarity=0.242 Sum_probs=29.4
Q ss_pred CeEEEEcCCChhhHHHHHHHHhC--CCeEEEEecCCC
Q 019795 5 KNILVTGGAGFIGTHCALQLLQG--GFKVVLIDNLHN 39 (335)
Q Consensus 5 ~~vlItGatG~iG~~l~~~L~~~--g~~V~~~~r~~~ 39 (335)
.+|+|.|| |.-|...+++|.++ |++|+++.+.+.
T Consensus 2 ~kv~iIGa-GpaGl~aA~~L~~~~~~~~V~v~e~~~~ 37 (230)
T d1cjca2 2 PQICVVGS-GPAGFYTAQHLLKHHSRAHVDIYEKQLV 37 (230)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHCSSCEEEEECSSSS
T ss_pred CeEEEECc-cHHHHHHHHHHHhcCCCCeEEEEeCCCC
Confidence 48999997 99999999999875 789999987654
|
| >d1pn0a1 c.3.1.2 (A:1-240,A:342-461) Phenol hydroxylase {Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Phenol hydroxylase species: Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]
Probab=85.44 E-value=0.37 Score=40.00 Aligned_cols=32 Identities=31% Similarity=0.432 Sum_probs=28.3
Q ss_pred EEEEcCCChhhHHHHHHHH-----hCCCeEEEEecCCC
Q 019795 7 ILVTGGAGFIGTHCALQLL-----QGGFKVVLIDNLHN 39 (335)
Q Consensus 7 vlItGatG~iG~~l~~~L~-----~~g~~V~~~~r~~~ 39 (335)
|+|.|| |..|..++..|+ +.|++|+++.|.+.
T Consensus 10 V~IvGa-G~aGl~lA~~La~~~~~~~G~~v~vlEr~~~ 46 (360)
T d1pn0a1 10 VLIVGA-GPAGLMAARVLSEYVRQKPDLKVRIIDKRST 46 (360)
T ss_dssp EEEECC-SHHHHHHHHHHHHHHHHSTTCCEEEECSSSS
T ss_pred EEEECc-CHHHHHHHHHHHhcccccCCCcEEEEcCCCC
Confidence 899998 999999999996 46999999988654
|
| >d1cf2o1 c.2.1.3 (O:1-138,O:304-336) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Methanothermus fervidus [TaxId: 2180]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Archaeon Methanothermus fervidus [TaxId: 2180]
Probab=85.01 E-value=2.7 Score=31.03 Aligned_cols=32 Identities=25% Similarity=0.384 Sum_probs=26.4
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhCC-CeEEEEec
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQGG-FKVVLIDN 36 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~r 36 (335)
|++|.|-|- |-||+.+++.|..++ .+++++.-
T Consensus 1 M~~VgINGf-GRIGR~v~R~l~~~~di~vvaInd 33 (171)
T d1cf2o1 1 MKAVAINGY-GTVGKRVADAIAQQDDMKVIGVSK 33 (171)
T ss_dssp CEEEEEECC-SHHHHHHHHHHHTSSSEEEEEEEE
T ss_pred CeEEEEEcC-cHHHHHHHHHHHhCCCceEEEEec
Confidence 679999985 999999999998875 66776653
|
| >d1hyqa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Nitrogenase iron protein-like domain: Cell division regulator MinD species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=85.00 E-value=0.44 Score=37.07 Aligned_cols=36 Identities=28% Similarity=0.372 Sum_probs=30.7
Q ss_pred CCeEEEEcCCChhhH-----HHHHHHHhCCCeEEEEecCCC
Q 019795 4 EKNILVTGGAGFIGT-----HCALQLLQGGFKVVLIDNLHN 39 (335)
Q Consensus 4 ~~~vlItGatG~iG~-----~l~~~L~~~g~~V~~~~r~~~ 39 (335)
||.|.|+++-|++|+ +|+..|+++|.+|.+++-+..
T Consensus 1 ~kvIav~s~KGGvGKTtia~nlA~~la~~g~~VlliD~D~~ 41 (232)
T d1hyqa_ 1 VRTITVASGKGGTGKTTITANLGVALAQLGHDVTIVDADIT 41 (232)
T ss_dssp CEEEEEEESSSCSCHHHHHHHHHHHHHHTTCCEEEEECCCS
T ss_pred CEEEEEECCCCCChHHHHHHHHHHHHHhCCCCEEEEeCCCC
Confidence 689999999998886 478889999999999987654
|
| >d1trba1 c.3.1.5 (A:1-118,A:245-316) Thioredoxin reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Thioredoxin reductase species: Escherichia coli [TaxId: 562]
Probab=84.95 E-value=0.28 Score=37.14 Aligned_cols=36 Identities=22% Similarity=0.408 Sum_probs=31.6
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCC
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHN 39 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 39 (335)
+.+.|+|.|| |..|...+..|.+.|.+|+++.+...
T Consensus 4 k~~dVvIIGG-GpaGl~AA~~~ar~g~~v~iie~~~~ 39 (190)
T d1trba1 4 KHSKLLILGS-GPAGYTAAVYAARANLQPVLITGMEK 39 (190)
T ss_dssp EEEEEEEECC-SHHHHHHHHHHHTTTCCCEEECCSST
T ss_pred CCCcEEEECC-CHHHHHHHHHHHHcCCceEEEEeecc
Confidence 4578999998 99999999999999999999987544
|
| >d1n4wa1 c.3.1.2 (A:9-318,A:451-507) Cholesterol oxidase of GMC family {Streptomyces sp. [TaxId: 1931]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Cholesterol oxidase of GMC family species: Streptomyces sp. [TaxId: 1931]
Probab=84.92 E-value=0.48 Score=39.77 Aligned_cols=32 Identities=22% Similarity=0.391 Sum_probs=28.9
Q ss_pred eEEEEcCCChhhHHHHHHHHhCCCeEEEEecCC
Q 019795 6 NILVTGGAGFIGTHCALQLLQGGFKVVLIDNLH 38 (335)
Q Consensus 6 ~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~ 38 (335)
-|+|.|+ |+-|..++.+|++.|++|.++-+..
T Consensus 4 ~VIVVGs-G~aG~v~A~rLaeaG~~VlvLEaG~ 35 (367)
T d1n4wa1 4 PAVVIGT-GYGAAVSALRLGEAGVQTLMLEMGQ 35 (367)
T ss_dssp EEEEECC-SHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred eEEEeCc-CHHHHHHHHHHHHCcCeEEEEecCC
Confidence 3899996 9999999999999999999998753
|
| >d1gesa1 c.3.1.5 (A:3-146,A:263-335) Glutathione reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Escherichia coli [TaxId: 562]
Probab=84.71 E-value=0.5 Score=36.32 Aligned_cols=30 Identities=27% Similarity=0.283 Sum_probs=28.1
Q ss_pred EEEEcCCChhhHHHHHHHHhCCCeEEEEecC
Q 019795 7 ILVTGGAGFIGTHCALQLLQGGFKVVLIDNL 37 (335)
Q Consensus 7 vlItGatG~iG~~l~~~L~~~g~~V~~~~r~ 37 (335)
|+|.|| |+.|...+.++.+.|.+|.++.+.
T Consensus 5 vvVIG~-G~aG~~aA~~a~~~G~kV~iiE~~ 34 (217)
T d1gesa1 5 YIAIGG-GSGGIASINRAAMYGQKCALIEAK 34 (217)
T ss_dssp EEEECC-SHHHHHHHHHHHTTTCCEEEEESS
T ss_pred EEEECC-CHHHHHHHHHHHHCCCEEEEEecc
Confidence 799998 999999999999999999999874
|
| >d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=84.53 E-value=0.78 Score=35.57 Aligned_cols=79 Identities=15% Similarity=0.145 Sum_probs=50.9
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCC
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKF 82 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~ 82 (335)
++.+||..|...+--+++...|. |.+|+++.+.+.-...+...+.+..- .++.++.+|..+- ......+
T Consensus 78 ~g~~VLeIGsGsGY~taila~l~--g~~V~~ie~~~~l~~~a~~~l~~~g~----~nv~~~~gd~~~g-----~~~~~pf 146 (215)
T d1jg1a_ 78 PGMNILEVGTGSGWNAALISEIV--KTDVYTIERIPELVEFAKRNLERAGV----KNVHVILGDGSKG-----FPPKAPY 146 (215)
T ss_dssp TTCCEEEECCTTSHHHHHHHHHH--CSCEEEEESCHHHHHHHHHHHHHTTC----CSEEEEESCGGGC-----CGGGCCE
T ss_pred ccceEEEecCCCChhHHHHHHhh--CceeEEEeccHHHHHHHHHHHHHcCC----ceeEEEECccccC-----CcccCcc
Confidence 45678888765444444544454 45699998875555555555554433 6899999998642 2333478
Q ss_pred CEEEEccccc
Q 019795 83 EAVIHFGALK 92 (335)
Q Consensus 83 d~vi~~a~~~ 92 (335)
|.|+-.++..
T Consensus 147 D~Iiv~~a~~ 156 (215)
T d1jg1a_ 147 DVIIVTAGAP 156 (215)
T ss_dssp EEEEECSBBS
T ss_pred eeEEeecccc
Confidence 9998877764
|
| >d1m6ya2 c.66.1.23 (A:2-114,A:216-294) TM0872, methyltransferase domain {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: MraW-like putative methyltransferases domain: TM0872, methyltransferase domain species: Thermotoga maritima [TaxId: 2336]
Probab=84.52 E-value=0.62 Score=35.46 Aligned_cols=77 Identities=17% Similarity=0.188 Sum_probs=53.0
Q ss_pred EEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCCCEEEEc
Q 019795 9 VTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKFEAVIHF 88 (335)
Q Consensus 9 ItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~d~vi~~ 88 (335)
+|-|+|....++.+.+ . +.+|+++++++.....+.+++... ..++.++.++..+...+..-+....+|.|+.-
T Consensus 30 ~t~G~Gghs~~il~~~-~-~~~vi~~D~d~~~l~~a~~~l~~~-----~~r~~~~~~~f~~~~~~~~~~~~~~vdgIl~D 102 (192)
T d1m6ya2 30 CTVGEGGHSRAILEHC-P-GCRIIGIDVDSEVLRIAEEKLKEF-----SDRVSLFKVSYREADFLLKTLGIEKVDGILMD 102 (192)
T ss_dssp TTCTTSHHHHHHHHHC-T-TCEEEEEESCHHHHHHHHHHTGGG-----TTTEEEEECCGGGHHHHHHHTTCSCEEEEEEE
T ss_pred ecCCCcHHHHHHHhcC-C-CCeEEEeechHHHHHHHHHhhccc-----cccccchhHHHhhHHHHHHHcCCCCcceeeec
Confidence 3556666666666665 3 468999999876665555555432 26799999998887666555544588999877
Q ss_pred cccc
Q 019795 89 GALK 92 (335)
Q Consensus 89 a~~~ 92 (335)
.|+.
T Consensus 103 lGvS 106 (192)
T d1m6ya2 103 LGVS 106 (192)
T ss_dssp CSCC
T ss_pred cchh
Confidence 7764
|
| >d1x74a1 c.123.1.1 (A:2-360) 2-methylacyl-CoA racemase Mcr {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: CoA-transferase family III (CaiB/BaiF) superfamily: CoA-transferase family III (CaiB/BaiF) family: CoA-transferase family III (CaiB/BaiF) domain: 2-methylacyl-CoA racemase Mcr species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=84.48 E-value=4.2 Score=33.68 Aligned_cols=78 Identities=19% Similarity=0.091 Sum_probs=49.9
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHH---HHHHHHhcC
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKD---DLDKLFSSQ 80 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~---~~~~~~~~~ 80 (335)
+-+||=.+ ...-|-...+.|+..|.+|+-+-+-........ ...+.+-+.+..|+.+++ .+.++++
T Consensus 6 girVld~~-~~~agp~~~~~lad~GA~VikvE~p~~~~~~~~--------~~~nr~K~si~lDl~~~~g~~~~~~Lv~-- 74 (359)
T d1x74a1 6 GLRVVELA-GIGPGPHAAMILGDLGADVVRIDRPSSVDGISR--------DAMLRNRRIVTADLKSDQGLELALKLIA-- 74 (359)
T ss_dssp TCEEEEEC-CSTHHHHHHHHHHHTTCEEEEEECC-----CCC--------CGGGCSCEEEECCTTSHHHHHHHHHHHT--
T ss_pred CCEEEEcC-CchHHHHHHHHHHHhCCEEEEECCCCCCCchhh--------hhhhCCCeEEEEeCcCHHHHHHHHHHHh--
Confidence 34444444 256677888889999999998865321111011 112245678999998865 5667777
Q ss_pred CCCEEEEccccc
Q 019795 81 KFEAVIHFGALK 92 (335)
Q Consensus 81 ~~d~vi~~a~~~ 92 (335)
+.|+||++-...
T Consensus 75 ~aDv~i~n~~pg 86 (359)
T d1x74a1 75 KADVLIEGYRPG 86 (359)
T ss_dssp TCSEEEECSCTT
T ss_pred hCCEEEecCCCC
Confidence 889999986654
|
| >d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain domain: Flavocytochrome c3 (respiratory fumarate reductase) species: Shewanella frigidimarina [TaxId: 56812]
Probab=84.16 E-value=0.48 Score=38.69 Aligned_cols=33 Identities=30% Similarity=0.470 Sum_probs=29.7
Q ss_pred eEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCC
Q 019795 6 NILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHN 39 (335)
Q Consensus 6 ~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 39 (335)
-|+|.|+ |..|...+..|+++|.+|+++.+.+.
T Consensus 18 DVlVIG~-G~aGl~aA~~la~~G~~V~lvEK~~~ 50 (308)
T d1y0pa2 18 DVVVVGS-GGAGFSAAISATDSGAKVILIEKEPV 50 (308)
T ss_dssp SEEEECC-SHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred CEEEECc-CHHHHHHHHHHHHCCCcEEEEecCCC
Confidence 3899997 99999999999999999999987643
|
| >d1uwva2 c.66.1.40 (A:75-432) rRNA (Uracil-5-)-methyltransferase RumA, catalytic domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: (Uracil-5-)-methyltransferase domain: rRNA (Uracil-5-)-methyltransferase RumA, catalytic domain species: Escherichia coli [TaxId: 562]
Probab=83.70 E-value=0.66 Score=38.92 Aligned_cols=97 Identities=14% Similarity=0.160 Sum_probs=57.2
Q ss_pred EEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCCCEEEEc
Q 019795 9 VTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKFEAVIHF 88 (335)
Q Consensus 9 ItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~d~vi~~ 88 (335)
.-+|+|.+|..|+ +.+.+|+++..++.+...+........ -.++.++.+|..+.-.. .......+|+||-.
T Consensus 219 LycG~G~fsl~La----~~~~~V~gvE~~~~ai~~A~~na~~n~----i~n~~~~~~~~~~~~~~-~~~~~~~~d~vilD 289 (358)
T d1uwva2 219 LFCGMGNFTLPLA----TQAASVVGVEGVPALVEKGQQNARLNG----LQNVTFYHENLEEDVTK-QPWAKNGFDKVLLD 289 (358)
T ss_dssp ESCTTTTTHHHHH----TTSSEEEEEESCHHHHHHHHHHHHHTT----CCSEEEEECCTTSCCSS-SGGGTTCCSEEEEC
T ss_pred ecccccccchhcc----ccccEEEeccCcHHHHHHHHHhHHhcc----cccceeeecchhhhhhh-hhhhhccCceEEeC
Confidence 4478899988765 456899999876655444433322211 15788999887653111 11112367988742
Q ss_pred ccccchhhhhcChHHHHHHhHHHHHHHHHHHHHcCCCEEEEecc
Q 019795 89 GALKAVAESVQHPFRYFDNNLIGTINLYQAMAKYNCKKLVFSSS 132 (335)
Q Consensus 89 a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~v~~Ss 132 (335)
+ +... ...+++.+.+.+.++|||+|.
T Consensus 290 --P-----PR~G-----------~~~~~~~l~~~~~~~ivYVSC 315 (358)
T d1uwva2 290 --P-----ARAG-----------AAGVMQQIIKLEPIRIVYVSC 315 (358)
T ss_dssp --C-----CTTC-----------CHHHHHHHHHHCCSEEEEEES
T ss_pred --C-----CCcc-----------HHHHHHHHHHcCCCEEEEEeC
Confidence 1 1111 112455555667899999997
|
| >d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Probab=83.65 E-value=0.59 Score=39.83 Aligned_cols=32 Identities=22% Similarity=0.265 Sum_probs=24.8
Q ss_pred CeEEEEcC------CChhh---HHHHHHHHhCCCeEEEEec
Q 019795 5 KNILVTGG------AGFIG---THCALQLLQGGFKVVLIDN 36 (335)
Q Consensus 5 ~~vlItGa------tG~iG---~~l~~~L~~~g~~V~~~~r 36 (335)
|+||+.+. +|++| .+|+++|.+.||+|+++..
T Consensus 1 MkIl~~~~~~pP~~~GG~~~~~~~La~~L~~~Gh~V~Vvtp 41 (437)
T d2bisa1 1 MKVLLLGFEFLPVKVGGLAEALTAISEALASLGHEVLVFTP 41 (437)
T ss_dssp CEEEEECSCCTTCCSSSHHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred CEEEEECCccCCcccCCHHHHHHHHHHHHHHcCCEEEEEec
Confidence 56777664 47776 5679999999999999864
|
| >d1p3y1_ c.34.1.1 (1:) MrsD {Bacillus sp. hil-y85/54728 [TaxId: 69002]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Homo-oligomeric flavin-containing Cys decarboxylases, HFCD superfamily: Homo-oligomeric flavin-containing Cys decarboxylases, HFCD family: Homo-oligomeric flavin-containing Cys decarboxylases, HFCD domain: MrsD species: Bacillus sp. hil-y85/54728 [TaxId: 69002]
Probab=83.65 E-value=0.33 Score=36.75 Aligned_cols=34 Identities=18% Similarity=0.174 Sum_probs=24.2
Q ss_pred CCCCCeEEEEcCCChhh----HHHHHHHHhCCCeEEEEe
Q 019795 1 MASEKNILVTGGAGFIG----THCALQLLQGGFKVVLID 35 (335)
Q Consensus 1 ~~~~~~vlItGatG~iG----~~l~~~L~~~g~~V~~~~ 35 (335)
|+++|+|+ .|.||.|+ ..+++.|.+.|++|.++-
T Consensus 3 ~l~~KkIl-lgvTGsiaa~k~~~l~~~L~~~g~eV~vv~ 40 (183)
T d1p3y1_ 3 ILKDKKLL-IGICGSISSVGISSYLLYFKSFFKEIRVVM 40 (183)
T ss_dssp TGGGCEEE-EEECSCGGGGGTHHHHHHHTTTSSEEEEEE
T ss_pred CcCCCEEE-EEEeCHHHHHHHHHHHHHHHHCCCeEEEEE
Confidence 56678755 66677554 367777777899998864
|
| >d1zh8a1 c.2.1.3 (A:4-131,A:276-328) Hypothetical protein TM0312 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Hypothetical protein TM0312 species: Thermotoga maritima [TaxId: 2336]
Probab=83.62 E-value=3.4 Score=30.48 Aligned_cols=71 Identities=14% Similarity=0.162 Sum_probs=40.4
Q ss_pred CCCCeEEEEcCCChhhHH-HHHHHHhCC--CeEEEEe-cCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHH
Q 019795 2 ASEKNILVTGGAGFIGTH-CALQLLQGG--FKVVLID-NLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLF 77 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~-l~~~L~~~g--~~V~~~~-r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~ 77 (335)
|+..+|.|.|. |.+|+. ..+.+.+.+ .+++++. +++. ..+.+.+..+ ...+. +++++++
T Consensus 1 MkkirigiIG~-G~~g~~~h~~~l~~~~~~~~i~~v~d~~~~----~~~~~~~~~~------~~~~~------~~~~ell 63 (181)
T d1zh8a1 1 LRKIRLGIVGC-GIAARELHLPALKNLSHLFEITAVTSRTRS----HAEEFAKMVG------NPAVF------DSYEELL 63 (181)
T ss_dssp CCCEEEEEECC-SHHHHHTHHHHHHTTTTTEEEEEEECSSHH----HHHHHHHHHS------SCEEE------SCHHHHH
T ss_pred CCCcEEEEEcC-CHHHHHHHHHHHHhCCCCeEEEEEEeccHh----hhhhhhcccc------cccee------eeeeccc
Confidence 44558899995 999986 467776643 5777654 3222 2222222211 11111 2366777
Q ss_pred hcCCCCEEEEcc
Q 019795 78 SSQKFEAVIHFG 89 (335)
Q Consensus 78 ~~~~~d~vi~~a 89 (335)
+...+|+|+-+.
T Consensus 64 ~~~~id~v~I~t 75 (181)
T d1zh8a1 64 ESGLVDAVDLTL 75 (181)
T ss_dssp HSSCCSEEEECC
T ss_pred cccccceeeccc
Confidence 777899998653
|
| >d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus halodurans [TaxId: 86665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: UbiE/COQ5-like domain: Hypothetical protein BH2331 species: Bacillus halodurans [TaxId: 86665]
Probab=83.36 E-value=0.86 Score=35.22 Aligned_cols=77 Identities=19% Similarity=0.163 Sum_probs=48.0
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCC
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKF 82 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~ 82 (335)
++++||=.|++ .|.. +..|++.|.+|++++.++.....+...+..... +++.++.+|..+.. +....+
T Consensus 15 ~~~rVLDiGcG--~G~~-~~~l~~~~~~v~gvD~s~~~i~~A~~~~~~~~~----~~i~~~~~d~~~l~-----~~~~~f 82 (231)
T d1vl5a_ 15 GNEEVLDVATG--GGHV-ANAFAPFVKKVVAFDLTEDILKVARAFIEGNGH----QQVEYVQGDAEQMP-----FTDERF 82 (231)
T ss_dssp SCCEEEEETCT--TCHH-HHHHGGGSSEEEEEESCHHHHHHHHHHHHHTTC----CSEEEEECCC-CCC-----SCTTCE
T ss_pred CcCEEEEeccc--CcHH-HHHHHHhCCEEEEEECCHHHHhhhhhccccccc----cccccccccccccc-----cccccc
Confidence 45788888864 3333 355677899999998865443333333333222 67899999987632 223478
Q ss_pred CEEEEcccc
Q 019795 83 EAVIHFGAL 91 (335)
Q Consensus 83 d~vi~~a~~ 91 (335)
|+|+-....
T Consensus 83 D~v~~~~~l 91 (231)
T d1vl5a_ 83 HIVTCRIAA 91 (231)
T ss_dssp EEEEEESCG
T ss_pred ccccccccc
Confidence 988865554
|
| >d1g3qa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Nitrogenase iron protein-like domain: Cell division regulator MinD species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=83.31 E-value=0.71 Score=35.80 Aligned_cols=36 Identities=25% Similarity=0.280 Sum_probs=30.1
Q ss_pred CCCeEEEEcCCChhhHH-----HHHHHHhCCCeEEEEecCC
Q 019795 3 SEKNILVTGGAGFIGTH-----CALQLLQGGFKVVLIDNLH 38 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~-----l~~~L~~~g~~V~~~~r~~ 38 (335)
|+|.|.|+|+.|++|+. |+..|++.|.+|.+++-+.
T Consensus 1 m~~vIav~~~kGGvGKTtia~nLA~~la~~g~~VlliD~D~ 41 (237)
T d1g3qa_ 1 MGRIISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGDL 41 (237)
T ss_dssp CCEEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred CCeEEEEECCCCCCcHHHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 46789999999998875 7888888999999998653
|
| >d1rp0a1 c.3.1.6 (A:7-284) Thiazole biosynthetic enzyme Thi4 {Thale cress(Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: Thi4-like domain: Thiazole biosynthetic enzyme Thi4 species: Thale cress(Arabidopsis thaliana) [TaxId: 3702]
Probab=83.06 E-value=0.6 Score=37.57 Aligned_cols=33 Identities=21% Similarity=0.460 Sum_probs=29.4
Q ss_pred eEEEEcCCChhhHHHHHHHHhC-CCeEEEEecCCC
Q 019795 6 NILVTGGAGFIGTHCALQLLQG-GFKVVLIDNLHN 39 (335)
Q Consensus 6 ~vlItGatG~iG~~l~~~L~~~-g~~V~~~~r~~~ 39 (335)
-|+|.|| |.-|..++..|+++ |++|.++.+.+.
T Consensus 35 DViVIGa-GpaGL~aA~~LA~~~G~~V~vlE~~~~ 68 (278)
T d1rp0a1 35 DVVVVGA-GSAGLSAAYEISKNPNVQVAIIEQSVS 68 (278)
T ss_dssp EEEEECC-SHHHHHHHHHHHTSTTSCEEEEESSSS
T ss_pred CEEEECC-CHHHHHHHHHHHHccCCeEEEEecCCC
Confidence 4999998 99999999999875 999999998653
|
| >d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Probable oxidoreductase At4g09670 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=82.62 E-value=1.3 Score=33.01 Aligned_cols=71 Identities=8% Similarity=0.055 Sum_probs=42.4
Q ss_pred CeEEEEcCCChhhHHHHHHHHhC-CCeEEEE-ecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCC
Q 019795 5 KNILVTGGAGFIGTHCALQLLQG-GFKVVLI-DNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKF 82 (335)
Q Consensus 5 ~~vlItGatG~iG~~l~~~L~~~-g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~ 82 (335)
.++.|.|. |.+|+..++.|... +.+++++ ++++.+ .+.+.+..+ .+....+ .++++++++...+
T Consensus 2 iki~iIG~-G~~g~~~~~~l~~~~~~~i~ai~d~~~~~----~~~~~~~~~--~~~~~~~-------~~~~~~ll~~~~i 67 (184)
T d1ydwa1 2 IRIGVMGC-ADIARKVSRAIHLAPNATISGVASRSLEK----AKAFATANN--YPESTKI-------HGSYESLLEDPEI 67 (184)
T ss_dssp EEEEEESC-CTTHHHHHHHHHHCTTEEEEEEECSSHHH----HHHHHHHTT--CCTTCEE-------ESSHHHHHHCTTC
T ss_pred eEEEEEcC-CHHHHHHHHHHHhCCCCEEEEEEeCCccc----cccchhccc--cccceee-------cCcHHHhhhcccc
Confidence 47889995 89999999999876 6788765 443222 222222111 0011121 1346677776789
Q ss_pred CEEEEcc
Q 019795 83 EAVIHFG 89 (335)
Q Consensus 83 d~vi~~a 89 (335)
|+|+-+.
T Consensus 68 D~v~I~t 74 (184)
T d1ydwa1 68 DALYVPL 74 (184)
T ss_dssp CEEEECC
T ss_pred ceeeecc
Confidence 9998643
|
| >d1xk7a1 c.123.1.1 (A:4-405) Crotonobetainyl-CoA:carnitine CoA-transferase, CaiB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: CoA-transferase family III (CaiB/BaiF) superfamily: CoA-transferase family III (CaiB/BaiF) family: CoA-transferase family III (CaiB/BaiF) domain: Crotonobetainyl-CoA:carnitine CoA-transferase, CaiB species: Escherichia coli [TaxId: 562]
Probab=82.60 E-value=6.5 Score=33.00 Aligned_cols=82 Identities=13% Similarity=0.153 Sum_probs=51.6
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCC-chhhHHhhhhhcCCccccceeEEEccCCCHH---HHHHHHhc
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNS-VPEAVDRVKDLAGPELAKKLEFHVGDLRNKD---DLDKLFSS 79 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~---~~~~~~~~ 79 (335)
+-+||=.+ +..-|-...+.|+..|.+|+-+-+.... ........... .+.+-+.+..|+.+++ -+.++++
T Consensus 11 GirVld~~-~~~agp~~~~~Lad~GAeVIkvE~p~~gd~~r~~~~~~~~----~n~~K~si~ldl~~~~G~~~~~~Lv~- 84 (402)
T d1xk7a1 11 GLRVVFSG-IEIAGPFAGQMFAEWGAEVIWIENVAWADTIRVQPNYPQL----SRRNLHALSLNIFKDEGREAFLKLME- 84 (402)
T ss_dssp TCEEEEEC-CSSHHHHHHHHHHHTTCEEEEEECSSSCCGGGGSSSHHHH----HTTTCEEEEECTTSHHHHHHHHHHHT-
T ss_pred CCEEEEeC-ChhHHHHHHHHHHHhCCeEEEECCCCCCCccccCCchhHH----hCCCCeEEEEeCcCHHHHHHHHHHHh-
Confidence 34555444 3556889999999999999988753211 10000000110 1245577899998875 4667777
Q ss_pred CCCCEEEEccccc
Q 019795 80 QKFEAVIHFGALK 92 (335)
Q Consensus 80 ~~~d~vi~~a~~~ 92 (335)
..|+||++-...
T Consensus 85 -~aDv~i~n~rpg 96 (402)
T d1xk7a1 85 -TTDIFIEASKGP 96 (402)
T ss_dssp -TCSEEEEECSSS
T ss_pred -hcCCceeeeccc
Confidence 889999986654
|
| >d1nt2a_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Fibrillarin homologue domain: Fibrillarin homologue species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=82.38 E-value=0.53 Score=36.36 Aligned_cols=76 Identities=12% Similarity=0.163 Sum_probs=50.6
Q ss_pred CCCeEEEEcC-CChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCC
Q 019795 3 SEKNILVTGG-AGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQK 81 (335)
Q Consensus 3 ~~~~vlItGa-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~ 81 (335)
++.+||=.|+ +|..-.+|++.. ..| .|++++.++.....+..+.... +++.++.+|..+.......+. .
T Consensus 56 pg~~VLDlGcG~G~~~~~la~~v-~~g-~V~gvDis~~~i~~a~~~a~~~------~ni~~i~~d~~~~~~~~~~~~--~ 125 (209)
T d1nt2a_ 56 GDERVLYLGAASGTTVSHLADIV-DEG-IIYAVEYSAKPFEKLLELVRER------NNIIPLLFDASKPWKYSGIVE--K 125 (209)
T ss_dssp SSCEEEEETCTTSHHHHHHHHHT-TTS-EEEEECCCHHHHHHHHHHHHHC------SSEEEECSCTTCGGGTTTTCC--C
T ss_pred CCCEEEEeCCcCCHHHHHHHHhc-cCC-eEEEEeCCHHHHHHHHHHhhcc------CCceEEEeeccCccccccccc--e
Confidence 4567888885 455556666544 455 8999998765444444333322 578999999998876666555 6
Q ss_pred CCEEEEc
Q 019795 82 FEAVIHF 88 (335)
Q Consensus 82 ~d~vi~~ 88 (335)
+|+|+|.
T Consensus 126 vd~v~~~ 132 (209)
T d1nt2a_ 126 VDLIYQD 132 (209)
T ss_dssp EEEEEEC
T ss_pred EEEEEec
Confidence 7777774
|
| >d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: CAC2371-like domain: Putative methyltransferase CAC2371 species: Clostridium acetobutylicum [TaxId: 1488]
Probab=81.77 E-value=0.42 Score=37.72 Aligned_cols=72 Identities=14% Similarity=0.093 Sum_probs=46.8
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCC
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKF 82 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~ 82 (335)
..++||=.|.+.+ + ++..|++.|.+|++++.++.....+.++.... ..++.++.+|+.+.. + ...+
T Consensus 37 ~~~~vLDiGCG~G--~-~~~~l~~~g~~v~GvD~S~~ml~~A~~~~~~~-----~~~v~~~~~d~~~~~-----~-~~~f 102 (246)
T d1y8ca_ 37 VFDDYLDLACGTG--N-LTENLCPKFKNTWAVDLSQEMLSEAENKFRSQ-----GLKPRLACQDISNLN-----I-NRKF 102 (246)
T ss_dssp CTTEEEEETCTTS--T-THHHHGGGSSEEEEECSCHHHHHHHHHHHHHT-----TCCCEEECCCGGGCC-----C-SCCE
T ss_pred CCCeEEEEeCcCC--H-HHHHHHHhCCccEeeccchhhhhhcccccccc-----Cccceeeccchhhhc-----c-cccc
Confidence 3578999987433 2 56677788999999987655444333333221 146889999987642 1 2368
Q ss_pred CEEEEc
Q 019795 83 EAVIHF 88 (335)
Q Consensus 83 d~vi~~ 88 (335)
|+|+-.
T Consensus 103 D~i~~~ 108 (246)
T d1y8ca_ 103 DLITCC 108 (246)
T ss_dssp EEEEEC
T ss_pred ccccee
Confidence 988854
|
| >d1vdca1 c.3.1.5 (A:1-117,A:244-316) Thioredoxin reductase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Thioredoxin reductase species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=81.45 E-value=0.47 Score=35.91 Aligned_cols=34 Identities=15% Similarity=0.283 Sum_probs=30.1
Q ss_pred CCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCC
Q 019795 4 EKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLH 38 (335)
Q Consensus 4 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~ 38 (335)
.++|+|.|| |..|...+..|.+.|.+|+++.+..
T Consensus 5 ~~~VvIIGg-GpaGl~aA~~~ar~g~~v~vie~~~ 38 (192)
T d1vdca1 5 NTRLCIVGS-GPAAHTAAIYAARAELKPLLFEGWM 38 (192)
T ss_dssp EEEEEEECC-SHHHHHHHHHHHHTTCCCEEECCSS
T ss_pred cceEEEECC-CHHHHHHHHHHHHcCCcEEEEEeec
Confidence 468999998 9999999999999999999997643
|
| >d1iuka_ c.2.1.8 (A:) Hypothetical protein TT1466 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Hypothetical protein TT1466 species: Thermus thermophilus [TaxId: 274]
Probab=81.18 E-value=1.4 Score=31.18 Aligned_cols=34 Identities=21% Similarity=0.279 Sum_probs=29.1
Q ss_pred CCCeEEEEcCC---ChhhHHHHHHHHhCCCeEEEEec
Q 019795 3 SEKNILVTGGA---GFIGTHCALQLLQGGFKVVLIDN 36 (335)
Q Consensus 3 ~~~~vlItGat---G~iG~~l~~~L~~~g~~V~~~~r 36 (335)
..|+|.|.||| +-.|..+++.|.+.||.++.+.-
T Consensus 12 ~pksIAVVGaS~~~~k~g~~v~~~L~~~g~~~~~v~~ 48 (136)
T d1iuka_ 12 QAKTIAVLGAHKDPSRPAHYVPRYLREQGYRVLPVNP 48 (136)
T ss_dssp HCCEEEEETCCSSTTSHHHHHHHHHHHTTCEEEEECG
T ss_pred CCCeEEEEeecCCCCCchHHHHHHHhcCCCCceEEEe
Confidence 35789999998 56899999999999999988754
|
| >d1dxla1 c.3.1.5 (A:4-152,A:276-347) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Garden pea (Pisum sativum) [TaxId: 3888]
Probab=81.10 E-value=0.7 Score=35.45 Aligned_cols=31 Identities=32% Similarity=0.473 Sum_probs=28.4
Q ss_pred EEEEcCCChhhHHHHHHHHhCCCeEEEEecCC
Q 019795 7 ILVTGGAGFIGTHCALQLLQGGFKVVLIDNLH 38 (335)
Q Consensus 7 vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~ 38 (335)
|+|.|| |..|...+.++++.|.+|+++.+.+
T Consensus 6 vvVIGg-GpaGl~aA~~aa~~G~kV~vie~~~ 36 (221)
T d1dxla1 6 VVIIGG-GPGGYVAAIKAAQLGFKTTCIEKRG 36 (221)
T ss_dssp EEEECC-SHHHHHHHHHHHHHTCCEEEEECSS
T ss_pred EEEECC-CHHHHHHHHHHHHCCCcEEEEEecC
Confidence 799998 9999999999999999999998753
|
| >d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Arginine methyltransferase domain: Protein arginine N-methyltransferase 3, PRMT3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=80.94 E-value=1.5 Score=35.90 Aligned_cols=74 Identities=19% Similarity=0.256 Sum_probs=45.0
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhCCC-eEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcC
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQGGF-KVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQ 80 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~ 80 (335)
.++|+||-.|++.++ ++..+++.|. +|++++.++.. ..+.+...+ ......+.++.+|+.+.. +...
T Consensus 34 ~~~~~VLDiGcG~G~---lsl~aa~~Ga~~V~aid~s~~~-~~a~~~~~~---~~~~~~i~~~~~~~~~l~-----~~~~ 101 (311)
T d2fyta1 34 FKDKVVLDVGCGTGI---LSMFAAKAGAKKVLGVDQSEIL-YQAMDIIRL---NKLEDTITLIKGKIEEVH-----LPVE 101 (311)
T ss_dssp TTTCEEEEETCTTSH---HHHHHHHTTCSEEEEEESSTHH-HHHHHHHHH---TTCTTTEEEEESCTTTSC-----CSCS
T ss_pred CCcCEEEEECCCCCH---HHHHHHHcCCCEEEEEeCHHHH-HHHHHHHHH---hCCCccceEEEeeHHHhc-----Cccc
Confidence 367899999864322 4556667784 79999876432 112222221 122367999999987742 1223
Q ss_pred CCCEEEE
Q 019795 81 KFEAVIH 87 (335)
Q Consensus 81 ~~d~vi~ 87 (335)
.+|+|+-
T Consensus 102 ~~D~Ivs 108 (311)
T d2fyta1 102 KVDVIIS 108 (311)
T ss_dssp CEEEEEE
T ss_pred cceEEEE
Confidence 7899985
|
| >d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: CAC2371-like domain: Hypothetical protein PH0226 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=80.73 E-value=1.5 Score=33.40 Aligned_cols=76 Identities=25% Similarity=0.322 Sum_probs=47.8
Q ss_pred CCCeEEEEcCCChhhHHHHHHHHhCCCeEEEEecCCCCchhhHHhhhhhcCCccccceeEEEccCCCHHHHHHHHhcCCC
Q 019795 3 SEKNILVTGGAGFIGTHCALQLLQGGFKVVLIDNLHNSVPEAVDRVKDLAGPELAKKLEFHVGDLRNKDDLDKLFSSQKF 82 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~~~~~~~~~~~ 82 (335)
+..+||=.|++.+. ++..|++.|++|++++.++.....+.++.... ...+.++.+|..+.. +....+
T Consensus 37 ~~~~ILDiGcG~G~---~~~~la~~~~~v~giD~S~~~i~~ak~~~~~~-----~~~~~~~~~d~~~l~-----~~~~~f 103 (226)
T d1ve3a1 37 KRGKVLDLACGVGG---FSFLLEDYGFEVVGVDISEDMIRKAREYAKSR-----ESNVEFIVGDARKLS-----FEDKTF 103 (226)
T ss_dssp SCCEEEEETCTTSH---HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-----TCCCEEEECCTTSCC-----SCTTCE
T ss_pred CCCEEEEECCCcch---hhhhHhhhhcccccccccccchhhhhhhhccc-----ccccccccccccccc-----ccCcCc
Confidence 34578888875433 55677788999999998654443333333322 145778888877632 333478
Q ss_pred CEEEEcccc
Q 019795 83 EAVIHFGAL 91 (335)
Q Consensus 83 d~vi~~a~~ 91 (335)
|+|+.....
T Consensus 104 D~I~~~~~l 112 (226)
T d1ve3a1 104 DYVIFIDSI 112 (226)
T ss_dssp EEEEEESCG
T ss_pred eEEEEecch
Confidence 998865544
|
| >d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Peptidoglycan biosynthesis glycosyltransferase MurG domain: Peptidoglycan biosynthesis glycosyltransferase MurG species: Escherichia coli [TaxId: 562]
Probab=80.64 E-value=0.9 Score=37.28 Aligned_cols=33 Identities=27% Similarity=0.562 Sum_probs=22.9
Q ss_pred CeEEEEcC-C-Chh--hHHHHHHHHhCCCeEEEEecC
Q 019795 5 KNILVTGG-A-GFI--GTHCALQLLQGGFKVVLIDNL 37 (335)
Q Consensus 5 ~~vlItGa-t-G~i--G~~l~~~L~~~g~~V~~~~r~ 37 (335)
|+|+|++| | |-+ ..+|+++|.++|++|..++..
T Consensus 1 kkili~~~GtGGHv~~a~al~~~L~~~G~eV~~i~~~ 37 (351)
T d1f0ka_ 1 KRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTA 37 (351)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEECT
T ss_pred CEEEEEcCCcHHHHHHHHHHHHHHHhCCCEEEEEEeC
Confidence 57777764 3 222 234889998999999987743
|
| >d2afhe1 c.37.1.10 (E:1-289) Nitrogenase iron protein {Azotobacter vinelandii [TaxId: 354]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Nitrogenase iron protein-like domain: Nitrogenase iron protein species: Azotobacter vinelandii [TaxId: 354]
Probab=80.32 E-value=0.82 Score=36.98 Aligned_cols=37 Identities=22% Similarity=0.274 Sum_probs=30.7
Q ss_pred CCCeEEEEcCCChhhHH-----HHHHHHhCCCeEEEEecCCCC
Q 019795 3 SEKNILVTGGAGFIGTH-----CALQLLQGGFKVVLIDNLHNS 40 (335)
Q Consensus 3 ~~~~vlItGatG~iG~~-----l~~~L~~~g~~V~~~~r~~~~ 40 (335)
+|++|.|.| =|++|+. |+..|++.|++|.++|-+++.
T Consensus 1 ~Mr~Iaisg-KGGVGKTT~a~NLA~~LA~~G~rVLlID~DpQ~ 42 (289)
T d2afhe1 1 AMRQCAIYG-KGGIGKSTTTQNLVAALAEMGKKVMIVGCDPKA 42 (289)
T ss_dssp CCEEEEEEE-CTTSSHHHHHHHHHHHHHHTTCCEEEEEECSSS
T ss_pred CccEEEEEC-CCCCCHHHHHHHHHHHHHHCCCCEEEEecCCCC
Confidence 478899987 6888875 788899999999999987653
|
| >d1qkia1 c.2.1.3 (A:12-199,A:435-449) Glucose 6-phosphate dehydrogenase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glucose 6-phosphate dehydrogenase, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=80.22 E-value=1.7 Score=33.24 Aligned_cols=45 Identities=9% Similarity=0.118 Sum_probs=30.4
Q ss_pred CeEEEEcCCChhhHH-HHHHHH---hC-----CCeEEEEecCCCCchhhHHhhh
Q 019795 5 KNILVTGGAGFIGTH-CALQLL---QG-----GFKVVLIDNLHNSVPEAVDRVK 49 (335)
Q Consensus 5 ~~vlItGatG~iG~~-l~~~L~---~~-----g~~V~~~~r~~~~~~~~~~~~~ 49 (335)
-+++|.||||=+.+. |...|- .. +..|++++|++-+.++..+.+.
T Consensus 21 ~t~VIFGatGDLA~RKL~PALf~L~~~g~Lp~~~~Iig~aR~~~s~e~fr~~~~ 74 (203)
T d1qkia1 21 HIFIIMGASGDLAKKKIYPTIWWLFRDGLLPENTFIVGYARSRLTVADIRKQSE 74 (203)
T ss_dssp EEEEEETTTSHHHHHTHHHHHHHHHHTTCSCSSEEEEEEBSSCCSCHHHHHHHS
T ss_pred cEEEEECcccHHHHhHHHHHHHHHHHcCCCCCCcEEEEEECCCCCHHHHHHHHH
Confidence 358999999987764 444442 22 4779999998877655554443
|
| >d1cjca1 c.3.1.1 (A:107-331) Adrenodoxin reductase of mitochondrial p450 systems {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: C-terminal domain of adrenodoxin reductase-like domain: Adrenodoxin reductase of mitochondrial p450 systems species: Cow (Bos taurus) [TaxId: 9913]
Probab=80.14 E-value=4.2 Score=31.27 Aligned_cols=25 Identities=24% Similarity=0.246 Sum_probs=22.0
Q ss_pred CCCCeEEEEcCCChhhHHHHHHHHhC
Q 019795 2 ASEKNILVTGGAGFIGTHCALQLLQG 27 (335)
Q Consensus 2 ~~~~~vlItGatG~iG~~l~~~L~~~ 27 (335)
+++++|+|.|+ |.++.-+++.|++.
T Consensus 37 ~~gk~VvVIGg-GNVAlD~aR~l~r~ 61 (225)
T d1cjca1 37 LSCDTAVILGQ-GNVALDVARILLTP 61 (225)
T ss_dssp TTSSEEEEESC-SHHHHHHHHHHHSC
T ss_pred ccCceEEEECC-chhHHHHHHHHhcC
Confidence 35789999997 99999999999984
|