Citrus Sinensis ID: 019816

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-----
Protein Sequence
MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAAVCPDPRPYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPELEKEIKELAKADGNGQYPDGVIKMNKEKEENEVQVMPMIYPFWKYLDENVIGMKEASQSHLVVAALIATVTFAAAFTLPGGYKSETEDGANRGTAILSKNAAFQAFVISDAIAMVLSLSAVFVHFILSLKFFKKFIFLFVFALSFTLVAMAAMIVAFVTGTYAMLATPSLGLAIVTCIIGLTFFLLVIFMFYMVFSRAEEEEYEVEEEMED
Secondary Structure (PSIPRED)
ccHHHHHHHcccHHHHHHHHHHccccccccccccccHHHHHHHcccHHHHHHHHHccccccccccccccccccHHHHHHHccccccccccccccHHHHHHHHHHHHHccccccHHHHHHcccccHHHHHHHHHHHHcccccccccccccccccccHHcccccccccccccccccHHcccccccHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHccHHHHHHHHHHcccHHHHcccccccHHHHHHHcccHHHHHHHHHccccHHHHHcccccccccHHHHHHHccccHHHHHHHHHHHHccHHHHHHHHHHcccccccHHccccccHHHHHHHHccccccccHHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccHHcccHHHHEEHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHccc
Coil and Loop (DISEMBL)
MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIfekdvkgntpfhvlaavcpdprpynagygiipyKIAKGYYQAVNKQNISVehinrygfpELEKEIKELAKadgngqypdgvIKMNKekeenevqvmPMIYPFWKYLDENVIGMKEASQSHLVVAALIATVTFAAaftlpggyksetedganrgtAILSKNAAFQAFVISDAIAMVLSLSAVFVHFILSLKFFKKFIFLFVFALSFTLVAMAAMIVAFVTGTYAMLATPSLGLAIVTCIIGLTFFLLVIFMFYMVFSraeeeeyeVEEEMED
Flexible Loop (DISEMBL)
mtalhlaagqgndwiVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAAVCPDPRPYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPELEKEIKELAkadgngqypdGVIKMNKEKEENEVQVMPMIYPFWKYLDENVIGMKEASQSHLVVAALIATVTFAAAFTLPGGYKSETEDGANRGTAILSKNAAFQAFVISDAIAMVLSLSAVFVHFILSLKFFKKFIFLFVFALSFTLVAMAAMIVAFVTGTYAMLATPSLGLAIVTCIIGLTFFLLVIFMFYMVFSRAEeeeyeveeemed
Low Complexity Region (SEG)
MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAAVCPDPRPYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPelekeikelakaDGNGQYPDGVIKMNKEKEENEVQVMPMIYPFWKYLDENVIGMKEASQSHlvvaaliatvtfaaaftlPGGYKSETEDGANRGTAILSKNAAFQAFVISDAIAMVLSLSAVFVHfilslkffkkfiflfvfALSFTLVAMAAMIVAFVTGTYAMLATPSLGLAIVTCIIGLTFFLLVIFMFYMVFSRAeeeeyeveeemeD
Disordered region (IsUnstruct)
*****LAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAAVCPDPRPYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPELEKEI***************************VQVMPMIYPFWKYLDENVIGMKEASQSHLVVAALIATVTFAAAFTLPGGYKS*****ANRGTAILSKNAAFQAFVISDAIAMVLSLSAVFVHFILSLKFFKKFIFLFVFALSFTLVAMAAMIVAFVTGTYAMLATPSLGLAIVTCIIGLTFFLLVIFMFYMVFS***************
Disordered Region (DISOPRED)
MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAAVCPDPRPYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPELEKEIKELAKADGNGQYPDGVIKMNKEKEENEVQVMPMIYPFWKYLDENVIGMKEASQSHLVVAALIATVTFAAAFTLPGGYKSE*****NRGTAILSKNAAFQAFVISDAIAMVLSLSAVFVHFILSLKFFKKFIFLFVFALSFTLVAMAAMIVAFVTGTYAMLATPSLGLAIVTCIIGLTFFLLVIFMFYMVFS*A*************
Disordered Region (DISEMBL)
MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAAVCPDPRPYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPELEKEIKELAKADGNGQYPDGVIKMNKEKEENEVQVMPMIYPFWKYLDENVIGMKEASQSHLVVAALIATVTFAAAFTLPGGYKSETEDGANRGTAILSKNAAFQAFVISDAIAMVLSLSAVFVHFILSLKFFKKFIFLFVFALSFTLVAMAAMIVAFVTGTYAMLATPSLGLAIVTCIIGLTFFLLVIFMFYMVFSRAE************
Disordered Region (DISPRO)
MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAAVCPDPRPYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPELEKEIKELAKADGNGQYPDGVIKMNKEKEEN************KYLDENVIGMKEASQSHLVVAALIATVTFAAAFTLPGGYKSETEDGANRGTAILSKNAAFQAFVISDAIAMVLSLSAVFVHFILSLKFFKKFIFLFVFALSFTLVAMAAMIVAFVTGTYAMLATPSLGLAIVTCIIGLTFFLLVIFMFYMVFSRAEEEEY********
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAAVCPDPRPYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPELEKEIKELAKADGNGQYPDGVIKMNKEKEENEVQVMPMIYPFWKYLDENVIGMKEASQSHLVVAALIATVTFAAAFTLPGGYKSETEDGANRGTAILSKNAAFQAFVISDAIAMVLSLSAVFVHFILSLKFFKKFIFLFVFALSFTLVAMAAMIVAFVTGTYAMLATPSLGLAIVTCIIGLTFFLLVIFMFYMVFSRAEEEEYEVEEEMED
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	335	2.2.26 [Sep-21-2011]
Q9C7A2	590	Ankyrin repeat-containing	no	no	0.880	0.5	0.273	8e-13
Q6AWW5	524	Ankyrin repeat-containing	no	no	0.964	0.616	0.258	3e-10
Q9ZU96	532	Ankyrin repeat-containing	no	no	0.928	0.584	0.220	2e-07

>sp|Q9C7A2|Y3236_ARATH Ankyrin repeat-containing protein At3g12360 OS=Arabidopsis thaliana GN=At3g12360 PE=2 SV=1

 Score = 75.1 bits (183), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 94/344 (27%), Positives = 152/344 (44%), Gaps = 49/344 (14%)

Query: 3   ALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKN 62
           ALHLAA QG+  +++ ++ + P+    +D +G   LH A+       +K LL+  P +  
Sbjct: 235 ALHLAARQGHVEVIKALLSKDPQLARRIDKKGQTALHMAVKGQSSEVVKLLLDADPAI-- 292

Query: 63  LIFEKDVKGNTPFHV-----------LAAVCPDPRPYNAGYGIIPYK----IAKGYYQAV 107
            + + D   NT  HV           L    PD    NA      +K    IA+G   + 
Sbjct: 293 -VMQPDKSCNTALHVATRKKRAEIVELLLSLPD---TNANTLTRDHKTALDIAEGLPLSE 348

Query: 108 NKQNISVEHINRYGF---PELEKEIKELAKADGNGQYPDGVIKMNKEKEENEVQVMPMIY 164
               I  E + R G     EL +   EL ++       D  I++ + K  N+  V  +  
Sbjct: 349 ESSYIK-ECLARSGALRANELNQPRDEL-RSTVTQIKNDVHIQLEQTKRTNK-NVHNISK 405

Query: 165 PFWKYLDENVIGMKEASQSHLVVAALIATVTFAAAFTLPGGYKSETEDGANRGTAILSKN 224
              K   E   G+  A+ S  VVA L ATV FAA FT+PGG         N G+A++   
Sbjct: 406 ELRKLHRE---GINNATNSVTVVAVLFATVAFAAIFTVPGGDN-------NDGSAVVVGR 455

Query: 225 AAFQAFVISDAIAMVLSLSAVFVHFIL---SLKFFKKFIFLFVFALSFTLVAMAAMI--V 279
           A+F+ F I +A+A+  SL+ V V   L     K  K+ + +        L+ +A+M   V
Sbjct: 456 ASFKIFFIFNALALFTSLAVVVVQITLVRGETKAEKRVVEVI-----NKLMWLASMCTSV 510

Query: 280 AFVTGTYAMLATPSLGLAIVTCIIGLTFF--LLVIFMFYMVFSR 321
           AF+  +Y ++   +   A +  ++G      +L    +Y+V S+
Sbjct: 511 AFLASSYIVVGRKNEWAAELVTVVGGVIMAGVLGTMTYYVVKSK 554

Arabidopsis thaliana (taxid: 3702)

>sp|Q6AWW5|Y5262_ARATH Ankyrin repeat-containing protein At5g02620 OS=Arabidopsis thaliana GN=At5g02620 PE=1 SV=1

 Score = 66.6 bits (161), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 93/360 (25%), Positives = 157/360 (43%), Gaps = 37/360 (10%)

Query: 2   TALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVK 61
           TALH AA  G+  IV+++I++       VD +G   LH A V    +++  +L E     
Sbjct: 161 TALHSAARNGHTVIVKKLIEKKAGMVTRVDKKGQTALHMA-VKGQNTEIVDVLMEAD--G 217

Query: 62  NLIFEKDVKGNTPFHVLAAVCPDPRPYNAGYGIIPYKIAKGYYQAVNKQN-ISVEHINRY 120
           +LI   D KGNTP H+        R   A       K  +    AVNK    +++   + 
Sbjct: 218 SLINSADNKGNTPLHIAV------RKNRAEIVQTVLKYCEVSRVAVNKSGETALDIAEKT 271

Query: 121 GFPEL-----------EKEIKELAKADGNG---QYPDGVIKMNKE---KEENEVQVMPMI 163
           G  E+            + IK   K + +G   +  + V ++  E   + E   +    I
Sbjct: 272 GLHEIVPLLQKIGMQNARSIKPAEKVEPSGSSRKLKETVSEIGHEVHTQLEQTGRTRREI 331

Query: 164 YPFWKYLDE-NVIGMKEASQSHLVVAALIATVTFAAAFTLPGGYKSETED---GANRGTA 219
               K +++ +  G+  A  S  +VA LIATV FAA F +PG Y  + +D   G + G A
Sbjct: 332 QGIAKRVNKMHTEGLNNAINSTTLVAILIATVAFAAIFNVPGQYTDDPKDVPPGYSLGEA 391

Query: 220 ILSKNAAFQAFVISDAIAMVLSLSAVFVHFILSL--KFFKKFIFLFVFALSFTLVAMAAM 277
             +    F  FV+ D+ A+ +SL+ V V   + +  +  KK +   +  L +    M + 
Sbjct: 392 RAAPRPEFLIFVVFDSFALFISLAVVVVQTSVVVIERRAKKQMMAIINKLMWMACIMIS- 450

Query: 278 IVAFVTGTYAMLATPSLGLAIVTCIIGLTFFL--LVIFMFYMVFSRAEEEEYEVEEEMED 335
            VAFV+ ++ ++      LA+    IG    +  L    ++++ +R E  +      M D
Sbjct: 451 -VAFVSLSFVVVGEKEKPLAVGVTAIGALIMVSTLGTMCYWVIANRIEGSKSSPASMMSD 509

Arabidopsis thaliana (taxid: 3702)

>sp|Q9ZU96|Y2168_ARATH Ankyrin repeat-containing protein At2g01680 OS=Arabidopsis thaliana GN=At2g01680 PE=1 SV=1

 Score = 56.6 bits (135), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 79/359 (22%), Positives = 141/359 (39%), Gaps = 48/359 (13%)

Query: 2   TALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLN-EYPVV 60
           T+LH A   G   IV+ +I++      + D +G   LH A+       ++ +L  +Y ++
Sbjct: 164 TSLHTAGRYGLLRIVKALIEKDAAIVGVKDKKGQTALHMAVKGRSLEVVEEILQADYTIL 223

Query: 61  KNLIFEKDVKGNTPFHVLAAVCPDPRPYNAGYGIIPYKIAKGYYQAVNKQN-ISVEHINR 119
                E+D KGNT  H+        RP      +    I      A+N Q   +++  ++
Sbjct: 224 N----ERDRKGNTALHI---ATRKARPQITSLLLTFTAIE---VNAINNQKETAMDLADK 273

Query: 120 YGFPELEKEIKE------------LAKADGNGQYPDGVIKMNKE-------KEENEVQVM 160
             + E   EI E            + + D        V  +  E        E+   +V 
Sbjct: 274 LQYSESALEINEALVEAGAKHGRFIGREDEARALKRAVSDIKHEVQSQLLQNEKTNRRVS 333

Query: 161 PMIYPFWKYLDENVIGMKEASQSHLVVAALIATVTFAAAFTLPGGYKSETEDGANRGTAI 220
            +     K   E V   +  + S  VVA L A++ F A F LPG Y +E   G++ G A 
Sbjct: 334 GIAKELRKLHREAV---QNTTNSITVVAVLFASIAFLAIFNLPGQYFTE---GSHVGQAN 387

Query: 221 LSKNAAFQAFVISDAIAMVLSLSAVFVHFIL---SLKFFKKFIFLFVFALSFTLVAMAAM 277
           ++    F+ F + +A ++ +SL+ V V   L     +  KK + +          A A  
Sbjct: 388 IAGRTGFRVFCLLNATSLFISLAVVVVQITLVAWDTRAQKKVVSVVN---KLMWAACACT 444

Query: 278 IVAFVTGTYAMLATPSLGLAIVTCIIGL-----TFFLLVIFMFYMVFSRAEEEEYEVEE 331
             AF+   +A++   +  +AI   ++G      T   +  F+F   F    + +  +  
Sbjct: 445 FGAFLAIAFAVVGKGNSWMAITITLLGAPILVGTLASMCYFVFRQRFRSGNDSQRRIRR 503

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	335
255585399	575	ankyrin repeat-containing protein, putat	0.847	0.493	0.465	2e-63
224127106	575	predicted protein [Populus trichocarpa]	0.865	0.504	0.435	3e-62
224127102	434	predicted protein [Populus trichocarpa]	0.859	0.663	0.45	8e-61
224126975	381	predicted protein [Populus trichocarpa]	0.811	0.713	0.420	7e-48
296085927	611	unnamed protein product [Vitis vinifera]	0.883	0.484	0.366	1e-42
224127077	276	predicted protein [Populus trichocarpa]	0.644	0.782	0.421	1e-41
359477893	617	PREDICTED: ankyrin repeat-containing pro	0.883	0.479	0.370	1e-41
298205151	1006	unnamed protein product [Vitis vinifera]	0.874	0.291	0.369	2e-41
296085925	380	unnamed protein product [Vitis vinifera]	0.826	0.728	0.368	2e-41
147805307	603	hypothetical protein VITISV_007868 [Viti	0.898	0.499	0.366	2e-40

>gi|255585399|ref|XP_002533395.1| ankyrin repeat-containing protein, putative [Ricinus communis] gi|223526769|gb|EEF28995.1| ankyrin repeat-containing protein, putative [Ricinus communis]

 Score =  249 bits (635), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 150/322 (46%), Positives = 204/322 (63%), Gaps = 38/322 (11%)

Query: 2   TALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVK 61
           TALHLAA Q N   ++EII +CP+CC+LVD+RGWNV H+A++S     LK LL   P   
Sbjct: 281 TALHLAACQANIKSMREIIFKCPDCCKLVDNRGWNVAHYAVISKSDDALKILLAN-PSCI 339

Query: 62  NLIFEKDVKGNTPFHVLAAVCPDPRPYNAGYGIIPYKIAKGYYQAVNKQNISV--EHINR 119
            L+ EKD +GNTP H+LAA+   PR             AKG+  AV +QN     E ++R
Sbjct: 340 YLVNEKDAQGNTPLHLLAALQSHPRSL--------MHHAKGHRFAVYRQNFLCIKELLSR 391

Query: 120 YGFPELEKEIKELAKADGNGQYPDGVIKMNKEKEENEVQVMPMIYPFWKYLDENVIGMKE 179
              P  +KEI+E  +  G G  P G I + K                    D+ ++  + 
Sbjct: 392 S--PCRKKEIQEWMRDLGGG--PLGQIVIKK--------------------DDFILTFER 427

Query: 180 ASQSHLVVAALIATVTFAAAFTLPGGYKSETEDGANRGTAILSKNAAFQAFVISDAIAMV 239
           A  SH+VVAAL+ATVTFAAAFTLPGGY+S  +D  ++G AIL KN+AF+AF+I+DAIAMV
Sbjct: 428 ARDSHIVVAALVATVTFAAAFTLPGGYRS-NDDEKDQGVAILGKNSAFKAFLITDAIAMV 486

Query: 240 LSLSAVFVHFILSLKFFK-KFIFLFVFALSFTLVAMAAMIVAFVTGTYAMLATPSLGLAI 298
           LS S++F+HF L+L  ++ +F++L V+A    + A+ AM+VAFVTGTYA+L +PS GLAI
Sbjct: 487 LSTSSLFIHFTLALHGYRQRFMWLMVYAFRCIVFAIEAMVVAFVTGTYAVL-SPSQGLAI 545

Query: 299 VTCIIGLTFFLLVIFMFYMVFS 320
            TC IGL+FF+ V F+   + S
Sbjct: 546 STCAIGLSFFIFVFFILTRINS 567

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224127106|ref|XP_002329398.1| predicted protein [Populus trichocarpa] gi|222870448|gb|EEF07579.1| predicted protein [Populus trichocarpa]

 Score =  244 bits (624), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 149/342 (43%), Positives = 203/342 (59%), Gaps = 52/342 (15%)

Query: 2   TALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVK 61
           TALH+AA QG+   ++EI+ RCP CC+LVD+RGWN LH+A+ S D    K  L + P + 
Sbjct: 267 TALHIAAIQGHVDAMKEIVSRCPACCDLVDNRGWNALHYAVASKDTKVFKECL-KIPELA 325

Query: 62  NLIFEKDVKGNTPFHVLAAVCPDPRPYNAGYGIIPYKIAKGYYQ----AVNKQNISVEHI 117
            L  EKD KGNTPFH++AA+  +   +      + +  + GY +     +NK+ +SV  I
Sbjct: 326 RLQTEKDDKGNTPFHLIAALAHEQPEWR----YVLFNDSNGYRKWQIYGLNKRKLSVNDI 381

Query: 118 NRYGFPELEKEIKELAKADGNG----QYPDGVIKMNKEKEENEVQVMPMIYPFWKYLDEN 173
               F E++KEI E     G+G    +        NKE E+                   
Sbjct: 382 YEEDFGEIQKEILESLNDGGSGPLGRRRKVLRRGRNKEGED------------------- 422

Query: 174 VIGMKEASQSHLVVAALIATVTFAAAFTLPGGYKSETEDGANRGTAILSKNAAFQAFVIS 233
              + +A +SHLVVAALIATVTFAAAFTLPGGYKS      +RGTAIL+K AAF  FV+S
Sbjct: 423 --ALSKARESHLVVAALIATVTFAAAFTLPGGYKS------DRGTAILAKKAAFIVFVVS 474

Query: 234 DAIAMVLSLSAVFVHFILSLKFF-----------KKFIFLFVFALSFTLVAMAAMIVAFV 282
           DA++MVLS+SAVF+HF++SL              +  I LF  A  FT++ M  MI+AF+
Sbjct: 475 DAMSMVLSISAVFIHFLISLIHAFEMEKSKDISEEAAIKLFGVATLFTMIGMGIMIIAFI 534

Query: 283 TGTYAMLATPSLGLAIVTCIIGLTFFLLVIFMFYMVFSRAEE 324
           TGTYA+L  PSLGLAI +C+IGL+FF +V  +F ++    E+
Sbjct: 535 TGTYAVL-EPSLGLAISSCLIGLSFFFIVYLVFRIILKDVED 575

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224127102|ref|XP_002329396.1| predicted protein [Populus trichocarpa] gi|222870446|gb|EEF07577.1| predicted protein [Populus trichocarpa]

 Score =  240 bits (612), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 153/340 (45%), Positives = 204/340 (60%), Gaps = 52/340 (15%)

Query: 2   TALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVK 61
           TALH+AA QG+   ++EI+ R P CCELVD+RGWN LH+A+ + D+   K  + E P + 
Sbjct: 104 TALHIAAIQGHVNAMKEIVSRRPACCELVDNRGWNALHYAVATKDREVFKECM-EIPELA 162

Query: 62  NLIFEKDVKGNTPFHVLAAVCPDPRP---------YNAGY--GIIPYKIAKGYYQAVNKQ 110
            L  +KD KGNTPFH++AA+  + +          YN     G  PYK        +N+Q
Sbjct: 163 RLKTKKDDKGNTPFHLIAALAHEKKQWRRVLYKYCYNKRVVCGKSPYKRE---VCGLNEQ 219

Query: 111 NISVEHINRYGFPELEKEIKELAKADGNGQYPDGVIKMNKEKEENEVQVMPMIYPFWKYL 170
            +SV  I    F E++KEI +  +  GNG  P G  K+ K + E E + +          
Sbjct: 220 KLSVNDIYEGKFGEIQKEILKSLEDVGNG--PLGSRKVLKGQNEGEKEALS--------- 268

Query: 171 DENVIGMKEASQSHLVVAALIATVTFAAAFTLPGGYKSETEDGANRGTAILSKNAAFQAF 230
                    A +SHLVVAALIATVTFAAAFTLPGGYK+      +RGTAIL+K AAF  F
Sbjct: 269 --------RARESHLVVAALIATVTFAAAFTLPGGYKN------DRGTAILAKKAAFIVF 314

Query: 231 VISDAIAMVLSLSAVFVHFILSL----KFFKKFI-------FLFVFALSFTLVAMAAMIV 279
           VISDA++MVLS+ AVF+HF++SL    +  K  +        LFV A  FT++ M  MI+
Sbjct: 315 VISDAMSMVLSILAVFIHFLISLIHGFEMVKDKVIDEDTTEILFVVATLFTMIGMGTMII 374

Query: 280 AFVTGTYAMLATPSLGLAIVTCIIGLTFFLLVIFMFYMVF 319
           AFVTGTYA+L  PSL LAI TC+IGL+FF+L   +F  ++
Sbjct: 375 AFVTGTYAVL-EPSLELAISTCLIGLSFFVLGNLVFAFIY 413

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224126975|ref|XP_002329352.1| predicted protein [Populus trichocarpa] gi|222870402|gb|EEF07533.1| predicted protein [Populus trichocarpa]

 Score =  197 bits (500), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 130/309 (42%), Positives = 177/309 (57%), Gaps = 37/309 (11%)

Query: 2   TALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVK 61
           TALHLA  +G+   V+ I+  CP CCELVD+RGWNVLH+A  +       +     P  +
Sbjct: 66  TALHLAVVRGDVAAVRAIMNPCPACCELVDNRGWNVLHYAATTI--KGYFYFPQWIPHFE 123

Query: 62  NLIFEKDVKGNTPFHVLAAVCPDPRPYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYG 121
            L +EKD  GNTP H+ AA+   P+   +   I  YK   G    +NK+N+SV+ I    
Sbjct: 124 KLKYEKDNDGNTPLHLYAALGNFPQQRLSSDWIHAYKKMCG----LNKRNLSVDDILGRN 179

Query: 122 FPELEKEIKELAKADGNGQYPDGVIKMNKEKEENEVQVMPMIYPFWKYLDENVIGMKEAS 181
           FPE +KEI E  K   +G     +  M KE                 YL  +  GM    
Sbjct: 180 FPETKKEILESLKDVRSGPLQRPIAMMKKE-----------------YLSISERGM---- 218

Query: 182 QSHLVVAALIATVTFAAAFTLPGGYKSETEDGANRGTAILSKNAAFQAFVISDAIAMVLS 241
           ++ ++VAAL+ATVTFAAAFT+PGGYK+E      +G A+L KNAAF  FVISDAIAM+LS
Sbjct: 219 ETRVLVAALVATVTFAAAFTMPGGYKNE------QGIAVLLKNAAFVVFVISDAIAMLLS 272

Query: 242 LSAVFVHFILSLKFFKKFI---FLFVFALSFTLVAMAAMIVAFVTGTYAMLATPSLGLAI 298
           +SA+F+HF  +    +  +       +  + T+ A+ AM++AF+TG+YA+LA PS  LAI
Sbjct: 273 ISALFMHFCWAPIGTRGQVEEDMKGNWTSTLTICAIPAMVIAFITGSYAVLA-PSSWLAI 331

Query: 299 VTCIIGLTF 307
            TC IG  F
Sbjct: 332 TTCFIGAAF 340

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296085927|emb|CBI31368.3| unnamed protein product [Vitis vinifera]

 Score =  179 bits (455), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 119/325 (36%), Positives = 182/325 (56%), Gaps = 29/325 (8%)

Query: 2   TALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLL--NEYPV 59
           TALH+AA + +  IV+ ++   P+CCE VDD+G NVLH+A++S        +L  N    
Sbjct: 303 TALHIAANRDHRDIVKLLLSHSPDCCEQVDDKGNNVLHYAIMSEQFLAAGGILGRNSLLS 362

Query: 60  VKNLIFEKDVKGNTPFHVLAAVCPDPRPYNAGYGIIPYKIAKGYYQAVNKQNISVEHINR 119
           V+ LI EKD KG+TP H+LA+        +A   +    + K    A++  +       R
Sbjct: 363 VRRLINEKDAKGDTPLHLLASYQVYDPFLSADNRVDKMALNKDKLTALDIISRDKVKPRR 422

Query: 120 YGFPELEKEIKELAKAD-GNGQYPDGVIKMNKEKEENEVQVMPMIYPFWKYLDENVIGMK 178
               E+ ++ +E  K   G   + + + K +   +  +V+            DE++   K
Sbjct: 423 IFKEEIRRQWREWEKVVVGPFSWQEAINKDSGSSKSEDVEK-----------DESISTTK 471

Query: 179 EASQSHLVVAALIATVTFAAAFTLPGGYKSETEDGANRGTAILSKNAAFQAFVISDAIAM 238
              ++HL+VAAL+ATVTFAA FTLPGGY        + G AIL+K AAF+AF+++D +A+
Sbjct: 472 REGETHLIVAALVATVTFAAGFTLPGGYN-------DNGMAILTKRAAFKAFIVTDTMAV 524

Query: 239 VLSLSAVFVHFILSL----KFFKKFIFLFVFALSFTLVAMAAMIVAFVTGTYAMLATPSL 294
           +LS+SAVFV+F +S+     +  K + +  F    T+++M AM+VAF+TG YA+L   S 
Sbjct: 525 ILSVSAVFVYFFMSVHEDEDYLDKHLIMGFF---LTVLSMGAMVVAFMTGLYAVLPLSS- 580

Query: 295 GLAIVTCIIGLTFFLLVIFMFYMVF 319
           GL IVTCII   F L   F+F  +F
Sbjct: 581 GLPIVTCIICCIFLLAFYFVFRQLF 605

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224127077|ref|XP_002329385.1| predicted protein [Populus trichocarpa] gi|222870435|gb|EEF07566.1| predicted protein [Populus trichocarpa]

 Score =  176 bits (447), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 112/266 (42%), Positives = 151/266 (56%), Gaps = 50/266 (18%)

Query: 2   TALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVK 61
           TALH+AA +G   +++EI+ RCP CCELVD+RGWN LH+A+ S D+   +  L   P + 
Sbjct: 23  TALHIAAIRGLADVMKEIVSRCPACCELVDNRGWNALHYAVASKDRKVFEECLR-IPELA 81

Query: 62  NLIFEKDVKGNTPFHVLAAVCPDPRPYNAGYGIIPYKIAKGYYQ----AVNKQNISVEHI 117
            L  EKD KGNTPFH++AA+       +  +G   +  + GY +     +NK+ +S+  I
Sbjct: 82  RLQTEKDDKGNTPFHLIAAL-------SLNWGSFLFNDSCGYSKWQTYGLNKRKLSINDI 134

Query: 118 NRYGFPELEKEIKELAKADGNG-------QYPDGVIKMNKEKEENEVQVMPMIYPFWKYL 170
               F E+EKEI E     G+G        +  G +  NKE EE                
Sbjct: 135 YLGEFAEIEKEILESLDDVGSGPLGRWTMAFKGGNVGRNKEGEE---------------- 178

Query: 171 DENVIGMKEASQSHLVVAALIATVTFAAAFTLPGGYKSETEDGANRGTAILSKNAAFQAF 230
                 + +A +SHLVVAALIATVTFAAAFTLPGGYKS      +RGTAIL+K AAF  F
Sbjct: 179 -----ALSKARESHLVVAALIATVTFAAAFTLPGGYKS------DRGTAILAKKAAFIVF 227

Query: 231 VISDAIAMVLSLSAVFVHFILSLKFF 256
           VISDA    +S+S + ++ IL   F+
Sbjct: 228 VISDA----MSMSPLCLYLILFFSFY 249

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359477893|ref|XP_002271294.2| PREDICTED: ankyrin repeat-containing protein At3g12360-like [Vitis vinifera]

 Score =  176 bits (446), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 124/335 (37%), Positives = 184/335 (54%), Gaps = 39/335 (11%)

Query: 2   TALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLK---HLLNEYP 58
           TALH+A+   +  IV++I+   P C E VDD+G N+ HFAM+     D     +  N + 
Sbjct: 310 TALHIASFHHHTKIVEKILSHSPGCREQVDDKGNNIFHFAMMKEGDDDFNPSSYFFNYWL 369

Query: 59  VVKNLIFEKDVKGNTPFHVLA-AVCPDPRPYNAGYGIIPYKIAKGYYQAVNKQNISVEHI 117
             + L+ EK+ +GNTP H+L+     D R       +  YK+ K   +A N ++++   I
Sbjct: 370 RSRGLVNEKNAQGNTPIHLLSLNQILDFR------FVWNYKVDK---KAYNNEDLTAYDI 420

Query: 118 ---NRYGFPELEKEIKELAKADGNGQYPDGVIKMNKEKE-ENEVQVMPMIYPFWKYLDEN 173
              ++    E +  I+   +A   G+      K  K +E E E +             E 
Sbjct: 421 ILRDKEDISEEKDRIQSWLEAVTTGRISSFWEKETKRQEIEQERK-------------EY 467

Query: 174 VIGMKEASQSHLVVAALIATVTFAAAFTLPGGYKSETEDGANRGTAILSKNAAFQAFVIS 233
           +  +++  ++HL+V+ALI TVTFAA FTLPGGYK +       G AILSK AAF+AFV++
Sbjct: 468 ISQLQKQGETHLIVSALITTVTFAAGFTLPGGYKEDD------GQAILSKKAAFRAFVVT 521

Query: 234 DAIAMVLSLSAVFVHFILSLKFFKKFI-FLFVFALSFTLVAMAAMIVAFVTGTYAMLATP 292
           D IAMV SL AVF+HF+++L    KF+    ++A S T+V M AM +AF TG YA+L   
Sbjct: 522 DTIAMVSSLCAVFLHFLMTLHKRGKFLEKHLLWAFSLTMVGMGAMAIAFATGLYAVLPHS 581

Query: 293 SLGLAIVTCIIGLTFFLLVIFMFYMVFSRAEEEEY 327
           S GL+++TCI+   FF L I + Y  F R    E+
Sbjct: 582 S-GLSVLTCILCSCFF-LSIAVEYCKFWRGTISEW 614

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|298205151|emb|CBI17210.3| unnamed protein product [Vitis vinifera]

 Score =  176 bits (446), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 125/338 (36%), Positives = 185/338 (54%), Gaps = 45/338 (13%)

Query: 2   TALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLK---HLLNEYP 58
           TALH+A+   +  IV++I+   P C E VDD+G N+ HFAM+     D     +  N + 
Sbjct: 102 TALHIASFHHHTKIVEKILSHSPGCREQVDDKGNNIFHFAMMKEGDDDFNPSSYFFNYWL 161

Query: 59  VVKNLIFEKDVKGNTPFHVLA-AVCPDPRPYNAGYGIIPYKIAKGYYQAVNKQNISVEHI 117
             + L+ EK+ +GNTP H+L+     D R       +  YK+ K  Y   N ++++   I
Sbjct: 162 RSRGLVNEKNAQGNTPIHLLSLNQILDFR------FVWNYKVDKKAY---NNEDLTAYDI 212

Query: 118 ---NRYGFPELEKEIKELAKADGNGQYPDGVIKMNKEKE-ENEVQVMPMIYPFWKYLDEN 173
              ++    E +  I+   +A   G+      K  K +E E E +             E 
Sbjct: 213 ILRDKEDISEEKDRIQSWLEAVTTGRISSFWEKETKRQEIEQERK-------------EY 259

Query: 174 VIGMKEASQSHLVVAALIATVTFAAAFTLPGGYKSETEDGANRGTAILSKNAAFQAFVIS 233
           +  +++  ++HL+V+ALI TVTFAA FTLPGGYK +       G AILSK AAF+AFV++
Sbjct: 260 ISQLQKQGETHLIVSALITTVTFAAGFTLPGGYKEDD------GQAILSKKAAFRAFVVT 313

Query: 234 DAIAMVLSLSAVFVHFILSL----KFFKKFIFLFVFALSFTLVAMAAMIVAFVTGTYAML 289
           D IAMV SL AVF+HF+++L    KF +K +   ++A S T+V M AM +AF TG YA+L
Sbjct: 314 DTIAMVSSLCAVFLHFLMTLHKRGKFLEKHL---LWAFSLTMVGMGAMAIAFATGLYAVL 370

Query: 290 ATPSLGLAIVTCIIGLTFFLLVIFMFYMVFSRAEEEEY 327
              S GL+++TCI+   FF L I + Y  F R    E+
Sbjct: 371 PHSS-GLSVLTCILCSCFF-LSIAVEYCKFWRGTISEW 406

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296085925|emb|CBI31366.3| unnamed protein product [Vitis vinifera]

 Score =  175 bits (444), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 122/331 (36%), Positives = 180/331 (54%), Gaps = 54/331 (16%)

Query: 2   TALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPV-- 59
           TALH+AA + +  IV+ ++   P+CCE VDD+G NVLH A++S      +H+LN+  +  
Sbjct: 22  TALHIAANRNHQDIVKLLLSHSPDCCEQVDDKGNNVLHSAIMSERYHATRHILNDNSLLR 81

Query: 60  VKNLIFEKDVKGNTPFHVLAAVCPDPRPYNAGYGIIPYKIAKGYYQAVNKQNISVEHINR 119
           V+ LI EKD KG++P H+LA+                       YQ  +    S+   NR
Sbjct: 82  VRRLINEKDAKGDSPLHLLAS-----------------------YQVYDP---SLSEDNR 115

Query: 120 YGFPELEKEIKELAKADGNGQ-------YPDGVIKMNKEKEENEVQVMPMIYPFWKYL-- 170
                L K+  +L   D   +       Y D +   N +  E   +       + + +  
Sbjct: 116 VDKMALNKD--KLTALDIFSRANVKPVFYFDQISGRNSKTIEGMGESCCWTISWQEAINK 173

Query: 171 --DENVIGMKEASQSHLVVAALIATVTFAAAFTLPGGYKSETEDGANRGTAILSKNAAFQ 228
             DE++  +K   ++HL+VAAL+ATVTFAA FTLPGGY        + G AIL+K AAF+
Sbjct: 174 DSDESISTIKRQGETHLIVAALVATVTFAAGFTLPGGYN-------DNGMAILTKRAAFK 226

Query: 229 AFVISDAIAMVLSLSAVFVHFILSLKFFKKFIFL-FVFALSFTLVAMAAMIVAFVTGTYA 287
           AF+++D IA++LS+SAVFV+F +SL    +F+    +     TL +M AM+VAF+TG YA
Sbjct: 227 AFIVTDTIAVILSVSAVFVYFFMSLHKDGEFLVKHLIMGFLLTLFSMGAMVVAFMTGLYA 286

Query: 288 MLATPSLGLAIVTCIIGLTFFLLVIFMFYMV 318
           +L   S GL IVTCII      +V+  FY +
Sbjct: 287 VLPLSS-GLPIVTCIIC----CIVLLAFYFI 312

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147805307|emb|CAN73752.1| hypothetical protein VITISV_007868 [Vitis vinifera]

 Score =  172 bits (435), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 121/330 (36%), Positives = 187/330 (56%), Gaps = 29/330 (8%)

Query: 2   TALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDL---KHLLNEYP 58
           TALH+AAG+G+  IV+ ++Q CP+CCE VD +G NV HFAM    K D    K L  +  
Sbjct: 287 TALHIAAGRGHIDIVKLLVQHCPDCCEQVDCKGQNVFHFAMAK--KKDXYPGKFLEIDGL 344

Query: 59  VVKNLIFEKD-VKGNTPFHVLAAVCPDPRPYNAGYGIIPYKIAKGYY-------QAVNKQ 110
            ++ L+ EKD VKG+TP H+LA+   D   +   + +    +   Y+       QA +  
Sbjct: 345 KLRGLVNEKDYVKGDTPLHLLASYLVDDEDFIVDHTVDKMGLNSEYFTPNDIVSQATHNW 404

Query: 111 NISVEHINRYGFPELEKEIKELAKADGNGQYPDGVIKMNKEKEENEVQVMPMIYPFWKYL 170
            ++  +I  Y     E  +  L+   G  +  D     ++ K+E+  +         K  
Sbjct: 405 -VNKSYILHYLRKSXEGAVGPLSWLLGIRE--DHGCSESENKDEDRTR---------KKD 452

Query: 171 DENVIGMKEASQSHLVVAALIATVTFAAAFTLPGGYKSETEDGANRGTAILSKNAAFQAF 230
           D+    + + +++HL+VAALI TVTFAA FT+PGGYK + +  ++ GTA+L+K AAF+AF
Sbjct: 453 DKIFFTLDKKAETHLIVAALITTVTFAAGFTVPGGYKEDKD--SSPGTAVLAKKAAFKAF 510

Query: 231 VISDAIAMVLSLSAVFVHFILSLKFFKKFI-FLFVFALSFTLVAMAAMIVAFVTGTYAML 289
           V++D IAMVLS+S+VFV F++     ++ I    ++    T+ AM AM+VAF+TG YA+L
Sbjct: 511 VVTDTIAMVLSISSVFVSFLMVYHKKQEIIGNXLLWGTLLTMFAMGAMVVAFMTGLYAVL 570

Query: 290 ATPSLGLAIVTCIIGLTFFLLVIFMFYMVF 319
              S GL I  C+I   FF+   ++F  + 
Sbjct: 571 PLSS-GLPIANCVICCIFFIFFCYLFRQIL 599

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	335
TAIR|locus:2128781	677	AT4G03460 "AT4G03460" [Arabido	0.220	0.109	0.368	1.7e-11
TAIR|locus:2020833	616	AT1G03670 "AT1G03670" [Arabido	0.223	0.121	0.328	4.6e-10
TAIR|locus:2128771	641	AT4G03450 "AT4G03450" [Arabido	0.253	0.132	0.363	2.2e-09
TAIR|locus:2129685	694	AT4G14390 "AT4G14390" [Arabido	0.217	0.105	0.378	2.8e-09
TAIR|locus:2129690	670	ACD6 "AT4G14400" [Arabidopsis	0.217	0.108	0.351	1.9e-08
TAIR|locus:2045233	662	AT2G31820 [Arabidopsis thalian	0.435	0.220	0.231	3.2e-08
TAIR|locus:2128791	683	AT4G03470 [Arabidopsis thalian	0.241	0.118	0.409	3.7e-08
TAIR|locus:2075009	607	AT3G09550 [Arabidopsis thalian	0.214	0.118	0.333	1.2e-06
TAIR|locus:2031948	627	AT1G05640 "AT1G05640" [Arabido	0.435	0.232	0.243	2.1e-06
TAIR|locus:2181768	524	ANK1 "ankyrin-like1" [Arabidop	0.217	0.139	0.368	2.3e-06

TAIR|locus:2128781 AT4G03460 "AT4G03460" [Arabidopsis thaliana (taxid:3702)]

 Score = 116 (45.9 bits), Expect = 1.7e-11, Sum P(2) = 1.7e-11
 Identities = 28/76 (36%), Positives = 42/76 (55%)

Query:     4 LHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLN--EYPVVK 61
             +H+A   G   I++ I++RCP+  EL+D    NVLH A  +     LK +L   +    +
Sbjct:   354 IHMAVKYGYVKILKAILKRCPDALELLDRENQNVLHVAAKNGKIEVLKFILRCCKDKNKE 413

Query:    62 NLIFEKDVKGNTPFHV 77
              LI E+D  GNTP H+
Sbjct:   414 KLINEEDANGNTPLHL 429

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2020833 AT1G03670 "AT1G03670" [Arabidopsis thaliana (taxid:3702)]

 Score = 133 (51.9 bits), Expect = 4.6e-10, Sum P(2) = 4.6e-10
 Identities = 25/76 (32%), Positives = 49/76 (64%)

Query:     2 TALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVK 61
             T +H+AA +G+  I++E ++ CP+  EL++++  N+ H A ++     +K+LL +    K
Sbjct:   289 TPIHMAAKEGHVRIIKEFLKHCPDSRELLNNQCQNIFHVAAIAGKSKVVKYLL-KLDEGK 347

Query:    62 NLIFEKDVKGNTPFHV 77
              ++ E+D+ GNTP H+
Sbjct:   348 RMMNEQDINGNTPLHL 363

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2128771 AT4G03450 "AT4G03450" [Arabidopsis thaliana (taxid:3702)]

 Score = 132 (51.5 bits), Expect = 2.2e-09, Sum P(2) = 2.2e-09
 Identities = 32/88 (36%), Positives = 50/88 (56%)

Query:     4 LHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSD-LKHLLNEYPVVKN 62
             +H+A  +G   I  ++++ CP+   L++ +G N+LH A  S      L  ++  Y ++KN
Sbjct:   295 IHMAVEKGRVKIFLKLLKCCPDSQYLLNKQGQNILHIAAKSGKTGTYLLQVIKAYDLIKN 354

Query:    63 -LIFEKDVKGNTPFHVLAAVCPDPRPYN 89
              LI E+DV GNTP H LA +   PR  N
Sbjct:   355 DLIMEQDVDGNTPLH-LATLTWRPRTVN 381

GO:0000165 "MAPK cascade" evidence=RCA

GO:0002237 "response to molecule of bacterial origin" evidence=RCA

GO:0009581 "detection of external stimulus" evidence=RCA

GO:0009595 "detection of biotic stimulus" evidence=RCA

GO:0009627 "systemic acquired resistance" evidence=RCA

GO:0009697 "salicylic acid biosynthetic process" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0010310 "regulation of hydrogen peroxide metabolic process" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

GO:0042742 "defense response to bacterium" evidence=RCA

GO:0045088 "regulation of innate immune response" evidence=RCA

GO:0050832 "defense response to fungus" evidence=RCA

TAIR|locus:2129685 AT4G14390 "AT4G14390" [Arabidopsis thaliana (taxid:3702)]

 Score = 115 (45.5 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
 Identities = 28/74 (37%), Positives = 44/74 (59%)

Query:     4 LHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNL 63
             +H AA +G++ IV+E I+RCP    L++  G NVLH A  +  K  + ++L      ++L
Sbjct:   363 IHTAAEKGHENIVEEFIKRCPGSKHLLNKLGQNVLHIAAKN-GKFWISNMLIINKDTEHL 421

Query:    64 IFEKDVKGNTPFHV 77
                +DV GNTP H+
Sbjct:   422 GVGQDVDGNTPLHL 435

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2129690 ACD6 "AT4G14400" [Arabidopsis thaliana (taxid:3702)]

 Score = 102 (41.0 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
 Identities = 26/74 (35%), Positives = 41/74 (55%)

Query:     4 LHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNL 63
             +H AA   +  I++E I+RCP    L++  G N+LH A  + + S   ++L      K+L
Sbjct:   334 IHSAAKNEHYEIIKEFIKRCPASKYLLNRLGQNILHVAAKN-EASLTAYMLMHDKDTKHL 392

Query:    64 IFEKDVKGNTPFHV 77
                +DV GNTP H+
Sbjct:   393 GVGQDVDGNTPLHL 406

GO:0008219 "cell death" evidence=IMP

GO:0009751 "response to salicylic acid stimulus" evidence=IMP

GO:0009816 "defense response to bacterium, incompatible interaction" evidence=IMP

GO:0016020 "membrane" evidence=ISS;IDA

GO:0009615 "response to virus" evidence=IEP

TAIR|locus:2045233 AT2G31820 [Arabidopsis thaliana (taxid:3702)]

 Score = 108 (43.1 bits), Expect = 3.2e-08, Sum P(2) = 3.2e-08
 Identities = 34/147 (23%), Positives = 55/147 (37%)

Query:   173 NVIGMKEASQSHXXXXXXXXXXXXXXXXXXPGGYKSETEDGANRGTAILSKNAAFQAFVI 232
             ++ G+  A  S                   PG Y+ +   G   G A ++  A F  F I
Sbjct:   470 HISGLNNAINSATVVAVLIATVAFAAIFTIPGQYEEDRSKGELLGQAHIANKAPFLVFFI 529

Query:   233 SDAIAMVLSLSAVFVHXXXXXXXXXXXXXXXXXALSFTLVAMAAMIVAFVTGTYAMLATP 292
              D++A+ +SL+ V V                         A   + +AFV+ +Y ++   
Sbjct:   530 FDSLALFISLAVVVVQTSVVVIEQKAKKKLVFVINKLMWCACLFISIAFVSLSYIVVGKE 589

Query:   293 SLGLAIVTCIIGLTFFLLVI-FMFYMV 318
              + LA+   +IG T  L  I  M Y V
Sbjct:   590 EMWLAVCATVIGGTIMLTTIGAMCYCV 616

GO:0005886 "plasma membrane" evidence=IDA

TAIR|locus:2128791 AT4G03470 [Arabidopsis thaliana (taxid:3702)]

 Score = 138 (53.6 bits), Expect = 3.7e-08, Sum P(2) = 3.7e-08
 Identities = 34/83 (40%), Positives = 48/83 (57%)

Query:     4 LHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNL 63
             +HLA  +G   +V+EI +RCP    L++ +G N+LH A  S     L+HL   +  + +L
Sbjct:   342 IHLAVEKGRIKVVKEICKRCPYSKLLLNKKGQNLLHIAAESGKFRILRHL-TAHEQINHL 400

Query:    64 IFEKDVKGNTPFHVLAAVCPDPR 86
               EKDV GNTP H LA +   PR
Sbjct:   401 ANEKDVDGNTPLH-LATIYWRPR 422

GO:0005739 "mitochondrion" evidence=ISM

TAIR|locus:2075009 AT3G09550 [Arabidopsis thaliana (taxid:3702)]

 Score = 95 (38.5 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
 Identities = 25/75 (33%), Positives = 37/75 (49%)

Query:     3 ALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKN 62
             ALHLAA QG+  IV+ ++ + P+     D +G   LH A+       ++ LL   P +  
Sbjct:   249 ALHLAARQGHVDIVRTLLDKDPQLARRTDKKGQTSLHMAVKGVSSQVVRLLLRADPAIVM 308

Query:    63 LIFEKDVKGNTPFHV 77
             L    D  GNT  H+
Sbjct:   309 L---PDKFGNTVLHI 320

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0009827 "plant-type cell wall modification" evidence=RCA

GO:0009860 "pollen tube growth" evidence=RCA

TAIR|locus:2031948 AT1G05640 "AT1G05640" [Arabidopsis thaliana (taxid:3702)]

 Score = 96 (38.9 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
 Identities = 36/148 (24%), Positives = 56/148 (37%)

Query:   173 NVIGMKEASQSHXXXXXXXXXXXXXXXXXXPGGYKSETEDGANR-GTAILSKNAAFQAFV 231
             ++ G+  A  S                   PG Y+ +   G    G A ++  A F  F 
Sbjct:   434 HINGLNNAINSATVVAVLIATVAFAAIFTIPGQYEEDRTKGLLLLGEARIAGKAPFLVFF 493

Query:   232 ISDAIAMVLSLSAVFVHXXXXXXXXXXXXXXXXXALSFTLVAMAAMIVAFVTGTYAMLAT 291
             I D++A+ +SL+ V V                        +A   + VAFV+ ++ ++  
Sbjct:   494 IFDSLALFISLAVVVVQTSVVVIEQKAKKNLVFVINKLMWLACLFISVAFVSLSFIVVGK 553

Query:   292 PSLGLAIVTCIIGLTFFLLVI-FMFYMV 318
               + LAI   IIG T  L  I  M Y V
Sbjct:   554 EDIWLAICATIIGGTIMLTTIGAMCYCV 581

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2181768 ANK1 "ankyrin-like1" [Arabidopsis thaliana (taxid:3702)]

 Score = 102 (41.0 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
 Identities = 28/76 (36%), Positives = 41/76 (53%)

Query:     2 TALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVK 61
             TALH AA  G+  IV+++I++       VD +G   LH A V    +++  +L E     
Sbjct:   161 TALHSAARNGHTVIVKKLIEKKAGMVTRVDKKGQTALHMA-VKGQNTEIVDVLMEAD--G 217

Query:    62 NLIFEKDVKGNTPFHV 77
             +LI   D KGNTP H+
Sbjct:   218 SLINSADNKGNTPLHI 233

GO:0005886 "plasma membrane" evidence=IDA

GO:0005783 "endoplasmic reticulum" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: fgenesh4_pg.C_scaffold_120000037 hypothetical protein (575 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	335
pfam13962	114	pfam13962, PGG, Domain of unknown function	1e-34
cd00204	126	cd00204, ANK, ankyrin repeats; ankyrin repeats med	3e-08
cd00204	126	cd00204, ANK, ankyrin repeats; ankyrin repeats med	1e-07
pfam13857	56	pfam13857, Ank_5, Ankyrin repeats (many copies)	6e-04
cd09322	289	cd09322, TDT_TehA_like, The Tellurite-resistance/D	9e-04
pfam13197	167	pfam13197, DUF4013, Protein of unknown function (D	0.003
pfam12796	91	pfam12796, Ank_2, Ankyrin repeats (3 copies)	0.004

>gnl|CDD|222475 pfam13962, PGG, Domain of unknown function

 Score =  122 bits (308), Expect = 1e-34
 Identities = 42/114 (36%), Positives = 66/114 (57%), Gaps = 3/114 (2%)

Query: 176 GMKEASQSHLVVAALIATVTFAAAFTLPGGYKSETEDGANRGTAILSKN-AAFQAFVISD 234
            +++   S LVVA LIATVTFAA FT PGGY  +     + GT IL+     F+AF +S+
Sbjct: 3   WLEKTRNSLLVVATLIATVTFAAGFTPPGGYWQDDGGH-HAGTPILAGKPRRFKAFFVSN 61

Query: 235 AIAMVLSLSAVFVHFILSLKFFKKFIFLFVFALSFTLVAMAAMIVAFVTGTYAM 288
            IA V SL AV +  +  +  F + +   +  L+   +++ +++VAF  G+Y +
Sbjct: 62  TIAFVASLVAVIL-LLYIVPSFSRRLPRLLALLTLLWLSLLSLMVAFAAGSYRV 114

The PGG domain is named for the highly conserved sequence motif found at the startt of the domain. The function is not known. Length = 114

>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

 Score = 51.2 bits (123), Expect = 3e-08
 Identities = 23/77 (29%), Positives = 34/77 (44%), Gaps = 5/77 (6%)

Query: 1   MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVV 60
            T LHLAA  G+  IV+ ++++        D  G   LH A       D+  LL ++   
Sbjct: 41  RTPLHLAAKNGHLEIVKLLLEKGA-DVNARDKDGNTPLHLA-ARNGNLDVVKLLLKHGAD 98

Query: 61  KNLIFEKDVKGNTPFHV 77
            N    +D  G TP H+
Sbjct: 99  VN---ARDKDGRTPLHL 112

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126

>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

 Score = 49.7 bits (119), Expect = 1e-07
 Identities = 24/79 (30%), Positives = 37/79 (46%), Gaps = 5/79 (6%)

Query: 1  MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVV 60
           T LHLAA  G+  +V+ +++   +     D+ G   LH A  +     +K LL +   V
Sbjct: 8  RTPLHLAASNGHLEVVKLLLENGAD-VNAKDNDGRTPLHLAAKNGHLEIVKLLLEKGADV 66

Query: 61 KNLIFEKDVKGNTPFHVLA 79
                +D  GNTP H+ A
Sbjct: 67 ----NARDKDGNTPLHLAA 81

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126

>gnl|CDD|206028 pfam13857, Ank_5, Ankyrin repeats (many copies)

 Score = 36.9 bits (86), Expect = 6e-04
 Identities = 14/41 (34%), Positives = 18/41 (43%), Gaps = 1/41 (2%)

Query: 1  MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFA 41
           T LHLAA  G   +VQ +++       L D  G   L  A
Sbjct: 17 NTPLHLAAKYGALELVQWLLKP-GVDLNLRDSDGLTALDLA 56

Length = 56

>gnl|CDD|187762 cd09322, TDT_TehA_like, The Tellurite-resistance/Dicarboxylate Transporter (TDT) family includes TehA proteins

 Score = 40.2 bits (95), Expect = 9e-04
 Identities = 19/119 (15%), Positives = 39/119 (32%), Gaps = 15/119 (12%)

Query: 217 GTAILSKNAAFQAFVISDAIAMVLSLSAVFVHFILSLKFFKKFIFLF----------VFA 266
           G  +    A      +   +  +L + A+ +  +L LK+  K +             V A
Sbjct: 10  GLGLAWLGAL-LLLGLPSIVGEILGILALLLWLLLLLKYLLKLLRYPEAVKAELRHPVRA 68

Query: 267 LSFTLVAMAAMIVAFVTGTYAMLATPSLGLAIVTCIIGLTFFLLVIFMFYMVFSRAEEE 325
             F   +M+ M+++     Y+    P L   +      L     + F+   +      E
Sbjct: 69  SFFATFSMSLMLLSIYLLPYS----PLLARVLWILGAVLHLVFTLYFVSRWIRGGKFLE 123

The Tellurite-resistance/Dicarboxylate Transporter (TDT) family includes members from all three kingdoms, but only three members of the family have been functionally characterized: the TehA protein of E. coli functioning as a tellurite-resistance uptake permease, the Mae1 protein of S. pombe functioning in the uptake of malate and other dicarboxylates, and the sulfite efflux pump (SSU1) of Saccharomyces cerevisiae. In plants, the plasma membrane protein SLAC1 (Slow Anion Channel-Associated 1), which is preferentially expressed in guard cells, encodes a distant homolog of fungal and bacterial dicarboxylate/malic acid transport proteins. SLAC1 is essential in mediating stomatal responses to physiological and stress stimuli. Members of the TDT family exhibit 10 putative transmembrane a-helical spanners (TMSs). Length = 289

>gnl|CDD|221975 pfam13197, DUF4013, Protein of unknown function (DUF4013)

 Score = 37.6 bits (88), Expect = 0.003
 Identities = 11/70 (15%), Positives = 28/70 (40%), Gaps = 1/70 (1%)

Query: 254 KFFKKFIFLFVFALSFTLVAMA-AMIVAFVTGTYAMLATPSLGLAIVTCIIGLTFFLLVI 312
                 +  FV  L + ++ +    ++A + G  A  +  + GL +   ++ L   L ++
Sbjct: 45  DLLVDGLKAFVIGLVYLIIPIIILALLALLVGFAASASPGAAGLGVFGLLLILLLILAIL 104

Query: 313 FMFYMVFSRA 322
               +  + A
Sbjct: 105 IALLLPAALA 114

This is a family of uncharacterized proteins that is found in archaea and bacteria. Length = 167

>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies)

 Score = 35.7 bits (83), Expect = 0.004
 Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 1/40 (2%)

Query: 2  TALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFA 41
          TALHLAA  GN  IV+ +++   +     D  G   LH A
Sbjct: 30 TALHLAARNGNLEIVKLLLEHGADVN-AKDKDGNTALHLA 68

Length = 91

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	335
PF13962	113	PGG: Domain of unknown function	99.97
KOG4412	226	consensus 26S proteasome regulatory complex, subun	99.91
KOG4412	226	consensus 26S proteasome regulatory complex, subun	99.88
KOG0509	600	consensus Ankyrin repeat and DHHC-type Zn-finger d	99.85
KOG0509	600	consensus Ankyrin repeat and DHHC-type Zn-finger d	99.8
PHA02741	169	hypothetical protein; Provisional	99.79
PHA02791	284	ankyrin-like protein; Provisional	99.79
KOG0510	929	consensus Ankyrin repeat protein [General function	99.78
PHA02743	166	Viral ankyrin protein; Provisional	99.77
PHA02859	209	ankyrin repeat protein; Provisional	99.77
PHA02875	413	ankyrin repeat protein; Provisional	99.76
PHA02791	284	ankyrin-like protein; Provisional	99.76
PHA02736	154	Viral ankyrin protein; Provisional	99.75
PHA02878	477	ankyrin repeat protein; Provisional	99.75
PHA02878	477	ankyrin repeat protein; Provisional	99.74
PHA02875	413	ankyrin repeat protein; Provisional	99.74
KOG0195	448	consensus Integrin-linked kinase [Signal transduct	99.73
PHA02874	434	ankyrin repeat protein; Provisional	99.73
PHA02884	300	ankyrin repeat protein; Provisional	99.72
PHA02874	434	ankyrin repeat protein; Provisional	99.72
PHA02946	446	ankyin-like protein; Provisional	99.71
PHA02859	209	ankyrin repeat protein; Provisional	99.7
KOG0512	228	consensus Fetal globin-inducing factor (contains a	99.69
PHA03100	480	ankyrin repeat protein; Provisional	99.69
KOG0512	228	consensus Fetal globin-inducing factor (contains a	99.69
PHA02795	437	ankyrin-like protein; Provisional	99.69
PHA02946	446	ankyin-like protein; Provisional	99.69
PHA03095	471	ankyrin-like protein; Provisional	99.68
PLN03192	823	Voltage-dependent potassium channel; Provisional	99.68
PHA02716	764	CPXV016; CPX019; EVM010; Provisional	99.68
PHA02716	764	CPXV016; CPX019; EVM010; Provisional	99.67
KOG0502	296	consensus Integral membrane ankyrin-repeat protein	99.67
KOG0508	615	consensus Ankyrin repeat protein [General function	99.66
PHA02876	682	ankyrin repeat protein; Provisional	99.66
PF12796	89	Ank_2: Ankyrin repeats (3 copies); InterPro: IPR02	99.66
PHA03095	471	ankyrin-like protein; Provisional	99.66
PHA03100	480	ankyrin repeat protein; Provisional	99.65
PHA02989	494	ankyrin repeat protein; Provisional	99.63
PHA02876	682	ankyrin repeat protein; Provisional	99.62
KOG0508	615	consensus Ankyrin repeat protein [General function	99.61
KOG0514	452	consensus Ankyrin repeat protein [General function	99.61
PHA02743	166	Viral ankyrin protein; Provisional	99.6
PHA02798	489	ankyrin-like protein; Provisional	99.6
KOG0510	929	consensus Ankyrin repeat protein [General function	99.59
PHA02798	489	ankyrin-like protein; Provisional	99.59
KOG3676	782	consensus Ca2+-permeable cation channel OSM-9 and	99.58
PLN03192	823	Voltage-dependent potassium channel; Provisional	99.57
PHA02795	437	ankyrin-like protein; Provisional	99.56
PHA02730	672	ankyrin-like protein; Provisional	99.56
KOG4177	1143	consensus Ankyrin [Cell wall/membrane/envelope bio	99.55
KOG0195	448	consensus Integrin-linked kinase [Signal transduct	99.55
cd00204	126	ANK ankyrin repeats; ankyrin repeats mediate prote	99.54
PHA02989	494	ankyrin repeat protein; Provisional	99.54
PHA02917	661	ankyrin-like protein; Provisional	99.53
KOG0505	527	consensus Myosin phosphatase, regulatory subunit [	99.51
PHA02884	300	ankyrin repeat protein; Provisional	99.51
PHA02736	154	Viral ankyrin protein; Provisional	99.51
KOG4177	1143	consensus Ankyrin [Cell wall/membrane/envelope bio	99.5
TIGR00870	743	trp transient-receptor-potential calcium channel p	99.5
PHA02730	672	ankyrin-like protein; Provisional	99.49
PHA02741	169	hypothetical protein; Provisional	99.47
PHA02917	661	ankyrin-like protein; Provisional	99.46
PHA02792	631	ankyrin-like protein; Provisional	99.45
KOG4214	117	consensus Myotrophin and similar proteins [Transcr	99.44
KOG0507	854	consensus CASK-interacting adaptor protein (caskin	99.43
COG0666	235	Arp FOG: Ankyrin repeat [General function predicti	99.42
TIGR00870	743	trp transient-receptor-potential calcium channel p	99.41
PF13637	54	Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A	99.38
PF13857	56	Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A	99.38
PTZ00322	664	6-phosphofructo-2-kinase/fructose-2,6-biphosphatas	99.37
PHA02792	631	ankyrin-like protein; Provisional	99.34
KOG0502	296	consensus Integral membrane ankyrin-repeat protein	99.34
PF12796	89	Ank_2: Ankyrin repeats (3 copies); InterPro: IPR02	99.31
KOG0505	527	consensus Myosin phosphatase, regulatory subunit [	99.29
KOG0514	452	consensus Ankyrin repeat protein [General function	99.23
PF13857	56	Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A	99.23
PF13637	54	Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A	99.21
KOG0507	854	consensus CASK-interacting adaptor protein (caskin	99.19
KOG0515	752	consensus p53-interacting protein 53BP/ASPP, conta	99.16
KOG1710	396	consensus MYND Zn-finger and ankyrin repeat protei	99.15
KOG4214	117	consensus Myotrophin and similar proteins [Transcr	99.09
COG0666	235	Arp FOG: Ankyrin repeat [General function predicti	99.05
cd00204	126	ANK ankyrin repeats; ankyrin repeats mediate prote	99.04
KOG3676	782	consensus Ca2+-permeable cation channel OSM-9 and	99.01
PTZ00322	664	6-phosphofructo-2-kinase/fructose-2,6-biphosphatas	98.93
KOG4369	2131	consensus RTK signaling protein MASK/UNC-44 [Signa	98.84
KOG1710	396	consensus MYND Zn-finger and ankyrin repeat protei	98.83
KOG0783	1267	consensus Uncharacterized conserved protein, conta	98.69
KOG4369	2131	consensus RTK signaling protein MASK/UNC-44 [Signa	98.63
KOG0515	752	consensus p53-interacting protein 53BP/ASPP, conta	98.53
KOG0818	669	consensus GTPase-activating proteins of the GIT fa	98.53
KOG0818	669	consensus GTPase-activating proteins of the GIT fa	98.52
KOG0506	622	consensus Glutaminase (contains ankyrin repeat) [A	98.52
KOG0783	1267	consensus Uncharacterized conserved protein, conta	98.49
PF13606	30	Ank_3: Ankyrin repeat	98.43
KOG0782	1004	consensus Predicted diacylglycerol kinase [Signal	98.41
KOG0782	1004	consensus Predicted diacylglycerol kinase [Signal	98.39
PF00023	33	Ank: Ankyrin repeat Hereditary spherocytosis; Inte	98.38
PF13606	30	Ank_3: Ankyrin repeat	98.35
KOG0522	560	consensus Ankyrin repeat protein [General function	98.29
KOG0522	560	consensus Ankyrin repeat protein [General function	98.23
KOG0506	622	consensus Glutaminase (contains ankyrin repeat) [A	98.22
PF00023	33	Ank: Ankyrin repeat Hereditary spherocytosis; Inte	98.21
KOG0705	749	consensus GTPase-activating protein Centaurin gamm	98.1
KOG0521	785	consensus Putative GTPase activating proteins (GAP	97.88
KOG0521	785	consensus Putative GTPase activating proteins (GAP	97.83
KOG0705	749	consensus GTPase-activating protein Centaurin gamm	97.82
KOG0520	975	consensus Uncharacterized conserved protein, conta	97.71
KOG0511	516	consensus Ankyrin repeat protein [General function	97.39
KOG0520	975	consensus Uncharacterized conserved protein, conta	97.15
KOG2384	223	consensus Major histocompatibility complex protein	97.0
KOG2384	223	consensus Major histocompatibility complex protein	96.82
KOG3609	822	consensus Receptor-activated Ca2+-permeable cation	96.32
smart00248	30	ANK ankyrin repeats. Ankyrin repeats are about 33	96.29
KOG0511	516	consensus Ankyrin repeat protein [General function	95.75
KOG2505	591	consensus Ankyrin repeat protein [General function	95.31
smart00248	30	ANK ankyrin repeats. Ankyrin repeats are about 33	95.27
KOG3609	822	consensus Receptor-activated Ca2+-permeable cation	94.87
KOG2505	591	consensus Ankyrin repeat protein [General function	94.56
PF15038	175	Jiraiya: Jiraiya	86.93
PF11700	477	ATG22: Vacuole effluxer Atg22 like; InterPro: IPR0	80.91
PF01544	292	CorA: CorA-like Mg2+ transporter protein; InterPro	80.83
PF14126	149	DUF4293: Domain of unknown function (DUF4293)	80.1

>PF13962 PGG: Domain of unknown function

Probab=99.97  E-value=5.6e-30  Score=199.27  Aligned_cols=110  Identities=43%  Similarity=0.649  Sum_probs=98.6

Q ss_pred             hhHHhhhchhhhHHHHHHHHHHHhhccCCCcccCCCCCCCCCceecccCcc-cchhHhhhhhHHHHHHHHHHHHHHHhhh
Q 019816          175 IGMKEASQSHLVVAALIATVTFAAAFTLPGGYKSETEDGANRGTAILSKNA-AFQAFVISDAIAMVLSLSAVFVHFILSL  253 (335)
Q Consensus       175 k~lk~~~~sllVVA~LiATvtf~a~~~~Pgg~~~~~~~~~~~g~~~~~~~~-~f~~F~~~n~~af~~S~~~i~~~~~~~~  253 (335)
                      ||+++++++++|||+|||||||||+||||||+||++  + +.|+|++.+++ .|++|+++|++||++|+.++++++ ..+
T Consensus         2 ~~~~~~~~~llVvAtLIATvtF~A~~tpPGG~~~~~--~-~~G~~il~~~~~~f~~F~~~nt~af~~S~~~i~~l~-~~~   77 (113)
T PF13962_consen    2 KWLEDTRNSLLVVATLIATVTFQAAFTPPGGYWQDD--D-DAGTPILAKKPSAFKAFLISNTIAFFSSLAAIFLLI-SGL   77 (113)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccccc--c-CCCCchhccccchhhhHHHHHHHHHHHHHHHHHHHH-HHh
Confidence            599999999999999999999999999999999954  2 89999999877 899999999999999999999977 333


Q ss_pred             -hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHH
Q 019816          254 -KFFKKFIFLFVFALSFTLVAMAAMIVAFVTGTYAM  288 (335)
Q Consensus       254 -~~~~~~~~~l~~~~~~~~~s~~~m~~af~~~~~~~  288 (335)
                       ...+.++..+.++..++++++.+|++||++|+|+|
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~a~~~~~~Af~~g~~~v  113 (113)
T PF13962_consen   78 DDFRRFLRRYLLIASVLMWIALISMMVAFAAGIYLV  113 (113)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence             23446677899999999999999999999999875

>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]

Probab=99.91  E-value=9.9e-25  Score=175.52  Aligned_cols=131  Identities=22%  Similarity=0.115  Sum_probs=111.7

Q ss_pred             CchHhHHHhcCCHHHHHHHhh-hCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHH
Q 019816            1 MTALHLAAGQGNDWIVQEIIQ-RCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLA   79 (335)
Q Consensus         1 ~TpLH~Aa~~G~~e~v~~Ll~-~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa   79 (335)
                      ||||||||..|+.+++++|++ .+-.++. +|..||||||+|+..|+.++|+.|+.   +.++++|..++.|.|+||+|+
T Consensus        39 Rt~LHwa~S~g~~eiv~fLlsq~nv~~dd-kDdaGWtPlhia~s~g~~evVk~Ll~---r~~advna~tn~G~T~LHyAa  114 (226)
T KOG4412|consen   39 RTPLHWACSFGHVEIVYFLLSQPNVKPDD-KDDAGWTPLHIAASNGNDEVVKELLN---RSGADVNATTNGGQTCLHYAA  114 (226)
T ss_pred             CceeeeeeecCchhHHHHHHhcCCCCCCC-ccccCCchhhhhhhcCcHHHHHHHhc---CCCCCcceecCCCcceehhhh
Confidence            699999999999999999995 3333444 69999999999999999999999993   248999999999999999999


Q ss_pred             hcCCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhcCCchHHHHHHHHHH--------cCCCCCCcchh
Q 019816           80 AVCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPELEKEIKELAKA--------DGNGQYPDGVI  146 (335)
Q Consensus        80 ~~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~--------~~~~~~p~~~~  146 (335)
                      ..|..++ ++|        +..|+.++.+|+.|+||||-|+.-|.-   +++++|..        +..|.+|++..
T Consensus       115 gK~r~eIaqlL--------le~ga~i~~kD~~~qtplHRAAavGkl---kvie~Li~~~a~~n~qDk~G~TpL~~a  179 (226)
T KOG4412|consen  115 GKGRLEIAQLL--------LEKGALIRIKDKQGQTPLHRAAAVGKL---KVIEYLISQGAPLNTQDKYGFTPLHHA  179 (226)
T ss_pred             cCChhhHHHHH--------HhcCCCCcccccccCchhHHHHhccch---hhHHHHHhcCCCCCcccccCccHHHHH
Confidence            9999999 999        899999999999999999999977743   56666665        33456777654

>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]

Probab=99.88  E-value=3.8e-23  Score=166.39  Aligned_cols=117  Identities=28%  Similarity=0.307  Sum_probs=105.4

Q ss_pred             CchHhHHHhcCCHHHHHHHhhh-CCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHH
Q 019816            1 MTALHLAAGQGNDWIVQEIIQR-CPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLA   79 (335)
Q Consensus         1 ~TpLH~Aa~~G~~e~v~~Ll~~-~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa   79 (335)
                      |||||+||..|+.|+|+.|+.+ ++|++. ++..|+||||||+..|+.+++++|+    ..|+.++.+|..|.||||-|+
T Consensus        73 WtPlhia~s~g~~evVk~Ll~r~~advna-~tn~G~T~LHyAagK~r~eIaqlLl----e~ga~i~~kD~~~qtplHRAA  147 (226)
T KOG4412|consen   73 WTPLHIAASNGNDEVVKELLNRSGADVNA-TTNGGQTCLHYAAGKGRLEIAQLLL----EKGALIRIKDKQGQTPLHRAA  147 (226)
T ss_pred             CchhhhhhhcCcHHHHHHHhcCCCCCcce-ecCCCcceehhhhcCChhhHHHHHH----hcCCCCcccccccCchhHHHH
Confidence            7999999999999999999999 888866 7999999999999999999999999    578999999999999999999


Q ss_pred             hcCCCCc-ccccccCcccccccccccccccCCCCCHHHHH-HhcCCchHHHHH
Q 019816           80 AVCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHIN-RYGFPELEKEIK  130 (335)
Q Consensus        80 ~~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a-~~~~~~~~~~i~  130 (335)
                      ..|..++ ++|        ...++.+|.+|+.|+||||.| +..+.++...++
T Consensus       148 avGklkvie~L--------i~~~a~~n~qDk~G~TpL~~al~e~~~d~a~lLV  192 (226)
T KOG4412|consen  148 AVGKLKVIEYL--------ISQGAPLNTQDKYGFTPLHHALAEGHPDVAVLLV  192 (226)
T ss_pred             hccchhhHHHH--------HhcCCCCCcccccCccHHHHHHhccCchHHHHHH
Confidence            9999999 888        888999999999999999999 455444333333

>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]

Probab=99.85  E-value=2.7e-20  Score=175.78  Aligned_cols=138  Identities=19%  Similarity=0.100  Sum_probs=117.7

Q ss_pred             chHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHhc
Q 019816            2 TALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAAV   81 (335)
Q Consensus         2 TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~~   81 (335)
                      |+|||||.+++++++++|++++++++..-..-|.||||||+++|+..++.+|+    +.|++++.+|.+|.||||+|++.
T Consensus        80 tlLHWAAiNNrl~v~r~li~~gadvn~~gG~l~stPLHWAar~G~~~vv~lLl----qhGAdpt~~D~~G~~~lHla~~~  155 (600)
T KOG0509|consen   80 TLLHWAAINNRLDVARYLISHGADVNAIGGVLGSTPLHWAARNGHISVVDLLL----QHGADPTLKDKQGLTPLHLAAQF  155 (600)
T ss_pred             cceeHHHHcCcHHHHHHHHHcCCCccccCCCCCCCcchHHHHcCcHHHHHHHH----HcCCCCceecCCCCcHHHHHHHh
Confidence            78999999999999999999999998754478999999999999999999999    68999999999999999999999


Q ss_pred             CCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhcCCch-HHHHHHHHH-----HcCCCCCCcchhhhhhh
Q 019816           82 CPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPEL-EKEIKELAK-----ADGNGQYPDGVIKMNKE  151 (335)
Q Consensus        82 g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~~~-~~~i~~~l~-----~~~~~~~p~~~~~~~~~  151 (335)
                      |+... .++        +..++|+|.+|++|+|||++|+..+... ...+++...     ++..|.+|+||.....+
T Consensus       156 ~~~~~vayl--------l~~~~d~d~~D~~grTpLmwAaykg~~~~v~~LL~f~a~~~~~d~~~g~TpLHwa~~~gN  224 (600)
T KOG0509|consen  156 GHTALVAYL--------LSKGADIDLRDNNGRTPLMWAAYKGFALFVRRLLKFGASLLLTDDNHGNTPLHWAVVGGN  224 (600)
T ss_pred             CchHHHHHH--------HHhcccCCCcCCCCCCHHHHHHHhcccHHHHHHHHhcccccccccccCCchHHHHHhcCC
Confidence            99988 666        6778999999999999999999766543 333333221     13567899999876544

>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]

Probab=99.80  E-value=8.9e-19  Score=165.60  Aligned_cols=110  Identities=21%  Similarity=0.064  Sum_probs=99.9

Q ss_pred             CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHh
Q 019816            1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAA   80 (335)
Q Consensus         1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~   80 (335)
                      .|||||||++|+..+|+.|+++|+|+.. +|.+|.+|+|+|++.++...+-+++    ..++++|.+|.+|+||||+|+.
T Consensus       113 stPLHWAar~G~~~vv~lLlqhGAdpt~-~D~~G~~~lHla~~~~~~~~vayll----~~~~d~d~~D~~grTpLmwAay  187 (600)
T KOG0509|consen  113 STPLHWAARNGHISVVDLLLQHGADPTL-KDKQGLTPLHLAAQFGHTALVAYLL----SKGADIDLRDNNGRTPLMWAAY  187 (600)
T ss_pred             CCcchHHHHcCcHHHHHHHHHcCCCCce-ecCCCCcHHHHHHHhCchHHHHHHH----HhcccCCCcCCCCCCHHHHHHH
Confidence            3899999999999999999999999955 8999999999999999999999999    5679999999999999999999


Q ss_pred             cCCCCc-ccccccCccccccccccccccc-CCCCCHHHHHHhcCC
Q 019816           81 VCPDPR-PYNAGYGIIPYKIAKGYYQAVN-KQNISVEHINRYGFP  123 (335)
Q Consensus        81 ~g~~~~-~lL~~~~~~~~~~~~~~~~~~n-~~G~Tpl~~a~~~~~  123 (335)
                      +|.... ..|        +.-++.++.+| ++|.||||+|+..+.
T Consensus       188 kg~~~~v~~L--------L~f~a~~~~~d~~~g~TpLHwa~~~gN  224 (600)
T KOG0509|consen  188 KGFALFVRRL--------LKFGASLLLTDDNHGNTPLHWAVVGGN  224 (600)
T ss_pred             hcccHHHHHH--------HHhcccccccccccCCchHHHHHhcCC
Confidence            999885 555        56788888888 899999999996654

>PHA02741 hypothetical protein; Provisional

Probab=99.79  E-value=3.8e-19  Score=148.83  Aligned_cols=119  Identities=17%  Similarity=0.119  Sum_probs=100.5

Q ss_pred             CchHhHHHhcCCHHHHHHHhhh------CCCccccccCCCCchHHHHHhcCC----HhHHHHHHhcCCcccccccccCC-
Q 019816            1 MTALHLAAGQGNDWIVQEIIQR------CPECCELVDDRGWNVLHFAMVSFD----KSDLKHLLNEYPVVKNLIFEKDV-   69 (335)
Q Consensus         1 ~TpLH~Aa~~G~~e~v~~Ll~~------~~~~~~~~d~~G~t~Lh~A~~~g~----~~~v~~Ll~~~~~~~~~~n~~d~-   69 (335)
                      +||||+||+.|+.++++.|+..      +.++ ..+|..|+||||+|+..|+    .++++.|+    ..++++|.+|. 
T Consensus        22 ~t~Lh~Aa~~g~~~~v~~l~~~~~~~~~ga~i-n~~d~~g~T~Lh~A~~~g~~~~~~~ii~~Ll----~~gadin~~~~~   96 (169)
T PHA02741         22 ENFFHEAARCGCFDIIARFTPFIRGDCHAAAL-NATDDAGQMCIHIAAEKHEAQLAAEIIDHLI----ELGADINAQEML   96 (169)
T ss_pred             CCHHHHHHHcCCHHHHHHHHHHhccchhhhhh-hccCCCCCcHHHHHHHcCChHHHHHHHHHHH----HcCCCCCCCCcC
Confidence            5899999999999999988643      3445 4479999999999999998    46778887    57899999995 


Q ss_pred             CCCchhHHHHhcCCCCc-ccccccCcccccc-cccccccccCCCCCHHHHHHhcCCchHHHHHHHHHH
Q 019816           70 KGNTPFHVLAAVCPDPR-PYNAGYGIIPYKI-AKGYYQAVNKQNISVEHINRYGFPELEKEIKELAKA  135 (335)
Q Consensus        70 ~G~TpLH~Aa~~g~~~~-~lL~~~~~~~~~~-~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~  135 (335)
                      +|+||||+|+..++.++ ++|        +. .+++++.+|.+|+||+|+|...+..   ++++.|.+
T Consensus        97 ~g~TpLh~A~~~~~~~iv~~L--------l~~~g~~~~~~n~~g~tpL~~A~~~~~~---~iv~~L~~  153 (169)
T PHA02741         97 EGDTALHLAAHRRDHDLAEWL--------CCQPGIDLHFCNADNKSPFELAIDNEDV---AMMQILRE  153 (169)
T ss_pred             CCCCHHHHHHHcCCHHHHHHH--------HhCCCCCCCcCCCCCCCHHHHHHHCCCH---HHHHHHHH
Confidence            99999999999999998 777        64 6899999999999999999988754   55555554

>PHA02791 ankyrin-like protein; Provisional

Probab=99.79  E-value=3.6e-19  Score=160.16  Aligned_cols=133  Identities=15%  Similarity=-0.122  Sum_probs=111.5

Q ss_pred             CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHh
Q 019816            1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAA   80 (335)
Q Consensus         1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~   80 (335)
                      +||||+|+..|+.++++.|++.+++.+. .  +|+||||+|+..|+.++++.|+    ..|++++.+|.+|+||||+|+.
T Consensus        31 ~TpLh~Aa~~g~~eiv~~Ll~~ga~~n~-~--d~~TpLh~Aa~~g~~eiV~lLL----~~Gadvn~~d~~G~TpLh~Aa~  103 (284)
T PHA02791         31 HSALYYAIADNNVRLVCTLLNAGALKNL-L--ENEFPLHQAATLEDTKIVKILL----FSGMDDSQFDDKGNTALYYAVD  103 (284)
T ss_pred             CcHHHHHHHcCCHHHHHHHHHCcCCCcC-C--CCCCHHHHHHHCCCHHHHHHHH----HCCCCCCCCCCCCCCHHHHHHH
Confidence            5999999999999999999999987754 2  4789999999999999999999    5789999999999999999999


Q ss_pred             cCCCCc-ccccccCcccccccccccccccCCCC-CHHHHHHhcCCchHHHHHHHHHHcC-------CCCCCcchhhhhhh
Q 019816           81 VCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNI-SVEHINRYGFPELEKEIKELAKADG-------NGQYPDGVIKMNKE  151 (335)
Q Consensus        81 ~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~-Tpl~~a~~~~~~~~~~i~~~l~~~~-------~~~~p~~~~~~~~~  151 (335)
                      .|+.++ ++|        ...+++++.+++.|. ||||+|+..+..   ++++.|.+.+       .+.+|+|.+.....
T Consensus       104 ~g~~eivk~L--------l~~gadin~~~~~g~~TpL~~Aa~~g~~---eivk~LL~~~~~~~d~~~g~TpLh~Aa~~g~  172 (284)
T PHA02791        104 SGNMQTVKLF--------VKKNWRLMFYGKTGWKTSFYHAVMLNDV---SIVSYFLSEIPSTFDLAILLSCIHITIKNGH  172 (284)
T ss_pred             cCCHHHHHHH--------HHCCCCcCccCCCCCcHHHHHHHHcCCH---HHHHHHHhcCCcccccccCccHHHHHHHcCC
Confidence            999999 888        788999999999885 899999987753   5666655532       24678877655443

>KOG0510 consensus Ankyrin repeat protein [General function prediction only]

Probab=99.78  E-value=1.5e-17  Score=160.54  Aligned_cols=125  Identities=21%  Similarity=0.189  Sum_probs=109.7

Q ss_pred             CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHh
Q 019816            1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAA   80 (335)
Q Consensus         1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~   80 (335)
                      .||||+||+.|+.+.++.|+..|.+++. ++.++.||||.|+.+|+.+.++.|+++  ....++|..|..|+||||+|++
T Consensus       274 ~tpLH~a~r~G~~~svd~Ll~~Ga~I~~-kn~d~~spLH~AA~yg~~ntv~rLL~~--~~~rllne~D~~g~tpLHlaa~  350 (929)
T KOG0510|consen  274 CTPLHYAARQGGPESVDNLLGFGASINS-KNKDEESPLHFAAIYGRINTVERLLQE--SDTRLLNESDLHGMTPLHLAAK  350 (929)
T ss_pred             CchHHHHHHcCChhHHHHHHHcCCcccc-cCCCCCCchHHHHHcccHHHHHHHHhC--cCccccccccccCCCchhhhhh
Confidence            4899999999999999999999999966 899999999999999999999999952  3457899999999999999999


Q ss_pred             cCCCCc-ccccccCcccccccccccc---cccCCCCCHHHHHHhcCCchHHHHHHHHHHcCCC
Q 019816           81 VCPDPR-PYNAGYGIIPYKIAKGYYQ---AVNKQNISVEHINRYGFPELEKEIKELAKADGNG  139 (335)
Q Consensus        81 ~g~~~~-~lL~~~~~~~~~~~~~~~~---~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~~~~~  139 (335)
                      .||..+ ++|        ++.|++..   -+|.+|.||||.|+..+..   ..++.|..+|+.
T Consensus       351 ~gH~~v~qlL--------l~~GA~~~~~~e~D~dg~TaLH~Aa~~g~~---~av~~Li~~Ga~  402 (929)
T KOG0510|consen  351 SGHDRVVQLL--------LNKGALFLNMSEADSDGNTALHLAAKYGNT---SAVQKLISHGAD  402 (929)
T ss_pred             cCHHHHHHHH--------HhcChhhhcccccccCCchhhhHHHHhccH---HHHHHHHHcCCc
Confidence            999999 998        78888776   4599999999999988754   667777665544

>PHA02743 Viral ankyrin protein; Provisional

Probab=99.77  E-value=1.2e-18  Score=145.29  Aligned_cols=123  Identities=17%  Similarity=0.072  Sum_probs=103.8

Q ss_pred             CchHhHHHhcCCH----HHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhH---HHHHHhcCCcccccccccC-CCCC
Q 019816            1 MTALHLAAGQGND----WIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSD---LKHLLNEYPVVKNLIFEKD-VKGN   72 (335)
Q Consensus         1 ~TpLH~Aa~~G~~----e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~---v~~Ll~~~~~~~~~~n~~d-~~G~   72 (335)
                      +++||.||+.|+.    +++++|++.++++. .+|.+|+||||+|+.+|+.+.   +++|+    ..|+++|.+| ..|+
T Consensus        21 ~~~l~~a~~~g~~~~l~~~~~~l~~~g~~~~-~~d~~g~t~Lh~Aa~~g~~~~~~~i~~Ll----~~Gadin~~d~~~g~   95 (166)
T PHA02743         21 QNTFLRICRTGNIYELMEVAPFISGDGHLLH-RYDHHGRQCTHMVAWYDRANAVMKIELLV----NMGADINARELGTGN   95 (166)
T ss_pred             CcHHHHHHHcCCHHHHHHHHHHHhhcchhhh-ccCCCCCcHHHHHHHhCccCHHHHHHHHH----HcCCCCCCCCCCCCC
Confidence            4689999999998    55556777777664 479999999999999998664   67888    5789999998 5899


Q ss_pred             chhHHHHhcCCCCc-ccccccCccccc-ccccccccccCCCCCHHHHHHhcCCchHHHHHHHHHHcCCC
Q 019816           73 TPFHVLAAVCPDPR-PYNAGYGIIPYK-IAKGYYQAVNKQNISVEHINRYGFPELEKEIKELAKADGNG  139 (335)
Q Consensus        73 TpLH~Aa~~g~~~~-~lL~~~~~~~~~-~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~~~~~  139 (335)
                      ||||+|+..++.++ ++|        + ..+++++.+|.+|+||+|+|+..+..   ++++.|...++.
T Consensus        96 TpLh~A~~~g~~~iv~~L--------l~~~gad~~~~d~~g~tpL~~A~~~~~~---~iv~~Ll~~ga~  153 (166)
T PHA02743         96 TLLHIAASTKNYELAEWL--------CRQLGVNLGAINYQHETAYHIAYKMRDR---RMMEILRANGAV  153 (166)
T ss_pred             cHHHHHHHhCCHHHHHHH--------HhccCCCccCcCCCCCCHHHHHHHcCCH---HHHHHHHHcCCC
Confidence            99999999999988 777        6 47999999999999999999987743   788888887655

>PHA02859 ankyrin repeat protein; Provisional

Probab=99.77  E-value=1.9e-18  Score=149.46  Aligned_cols=102  Identities=10%  Similarity=-0.063  Sum_probs=56.9

Q ss_pred             chHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcC--CHhHHHHHHhcCCcccccccccC-CCCCchhHHH
Q 019816            2 TALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSF--DKSDLKHLLNEYPVVKNLIFEKD-VKGNTPFHVL   78 (335)
Q Consensus         2 TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g--~~~~v~~Ll~~~~~~~~~~n~~d-~~G~TpLH~A   78 (335)
                      ||||+|++.|+.++++.|++..    ...|..|+||||+|+.++  +.+++++|+    +.|+++|.+| .+|.||||+|
T Consensus        23 ~pL~~A~~~~~~~~vk~Li~~~----n~~~~~g~TpLh~a~~~~~~~~eiv~~Ll----~~gadvn~~~~~~g~TpLh~a   94 (209)
T PHA02859         23 NPLFYYVEKDDIEGVKKWIKFV----NDCNDLYETPIFSCLEKDKVNVEILKFLI----ENGADVNFKTRDNNLSALHHY   94 (209)
T ss_pred             cHHHHHHHhCcHHHHHHHHHhh----hccCccCCCHHHHHHHcCCCCHHHHHHHH----HCCCCCCccCCCCCCCHHHHH
Confidence            5666666666666666665431    224555666666665533  556666666    3455666654 3566666665


Q ss_pred             HhcC---CCCc-ccccccCcccccccccccccccCCCCCHHHHHH
Q 019816           79 AAVC---PDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINR  119 (335)
Q Consensus        79 a~~g---~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~  119 (335)
                      +..+   +.++ ++|        +..|++++.+|.+|.||+|+|+
T Consensus        95 ~~~~~~~~~eiv~~L--------l~~gadin~~d~~G~TpLh~a~  131 (209)
T PHA02859         95 LSFNKNVEPEILKIL--------IDSGSSITEEDEDGKNLLHMYM  131 (209)
T ss_pred             HHhCccccHHHHHHH--------HHCCCCCCCcCCCCCCHHHHHH
Confidence            5432   2333 455        5556666666666666666655

>PHA02875 ankyrin repeat protein; Provisional

Probab=99.76  E-value=1.8e-18  Score=165.07  Aligned_cols=123  Identities=15%  Similarity=0.037  Sum_probs=97.7

Q ss_pred             chHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHhc
Q 019816            2 TALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAAV   81 (335)
Q Consensus         2 TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~~   81 (335)
                      ||||.|+..|+.++++.|++.+++.....+.+|+||||+|+..|+.++++.|+    ..|++++.+|.+|+||||+|+..
T Consensus        70 t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~~~~~iv~~Ll----~~gad~~~~~~~g~tpLh~A~~~  145 (413)
T PHA02875         70 SELHDAVEEGDVKAVEELLDLGKFADDVFYKDGMTPLHLATILKKLDIMKLLI----ARGADPDIPNTDKFSPLHLAVMM  145 (413)
T ss_pred             cHHHHHHHCCCHHHHHHHHHcCCcccccccCCCCCHHHHHHHhCCHHHHHHHH----hCCCCCCCCCCCCCCHHHHHHHc
Confidence            67777777777777777777766655555677888888888888888888888    56888888888899999999998


Q ss_pred             CCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhcCCchHHHHHHHHHHcCCC
Q 019816           82 CPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPELEKEIKELAKADGNG  139 (335)
Q Consensus        82 g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~~~~~  139 (335)
                      |+.+. ++|        +..+++++.+|..|.||||+|+..+..   ++++.|.+.|+.
T Consensus       146 ~~~~~v~~L--------l~~g~~~~~~d~~g~TpL~~A~~~g~~---eiv~~Ll~~ga~  193 (413)
T PHA02875        146 GDIKGIELL--------IDHKACLDIEDCCGCTPLIIAMAKGDI---AICKMLLDSGAN  193 (413)
T ss_pred             CCHHHHHHH--------HhcCCCCCCCCCCCCCHHHHHHHcCCH---HHHHHHHhCCCC
Confidence            88888 777        778888888899999999999877643   677777776544

>PHA02791 ankyrin-like protein; Provisional

Probab=99.76  E-value=3.2e-18  Score=154.06  Aligned_cols=121  Identities=17%  Similarity=0.047  Sum_probs=96.8

Q ss_pred             CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCC-chhHHHH
Q 019816            1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGN-TPFHVLA   79 (335)
Q Consensus         1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~-TpLH~Aa   79 (335)
                      +||||+|+..|+.++++.|++.+++++. +|..|+||||+|+..|+.++++.|+    ..+++++.+|..|+ ||||+|+
T Consensus        62 ~TpLh~Aa~~g~~eiV~lLL~~Gadvn~-~d~~G~TpLh~Aa~~g~~eivk~Ll----~~gadin~~~~~g~~TpL~~Aa  136 (284)
T PHA02791         62 EFPLHQAATLEDTKIVKILLFSGMDDSQ-FDDKGNTALYYAVDSGNMQTVKLFV----KKNWRLMFYGKTGWKTSFYHAV  136 (284)
T ss_pred             CCHHHHHHHCCCHHHHHHHHHCCCCCCC-CCCCCCCHHHHHHHcCCHHHHHHHH----HCCCCcCccCCCCCcHHHHHHH
Confidence            5899999999999999999999988855 7899999999999999999999999    56788888888874 8999999


Q ss_pred             hcCCCCc-ccccccCccccccccccccccc-CCCCCHHHHHHhcCCchHHHHHHHHHHcCCC
Q 019816           80 AVCPDPR-PYNAGYGIIPYKIAKGYYQAVN-KQNISVEHINRYGFPELEKEIKELAKADGNG  139 (335)
Q Consensus        80 ~~g~~~~-~lL~~~~~~~~~~~~~~~~~~n-~~G~Tpl~~a~~~~~~~~~~i~~~l~~~~~~  139 (335)
                      ..|+.++ ++|        +..+.+.  .| ..|.||||+|+..+..   ++++.|.+.|+.
T Consensus       137 ~~g~~eivk~L--------L~~~~~~--~d~~~g~TpLh~Aa~~g~~---eiv~lLL~~gAd  185 (284)
T PHA02791        137 MLNDVSIVSYF--------LSEIPST--FDLAILLSCIHITIKNGHV---DMMILLLDYMTS  185 (284)
T ss_pred             HcCCHHHHHHH--------HhcCCcc--cccccCccHHHHHHHcCCH---HHHHHHHHCCCC
Confidence            9988888 666        4443322  23 2578899999887744   777777776553

>PHA02736 Viral ankyrin protein; Provisional

Probab=99.75  E-value=2.4e-18  Score=141.74  Aligned_cols=124  Identities=15%  Similarity=0.061  Sum_probs=96.4

Q ss_pred             CchHhHHHhcCCHHHHHHHhhhC----CCccccccCCCCchHHHHHhcCCHh---HHHHHHhcCCcccccccccC-CCCC
Q 019816            1 MTALHLAAGQGNDWIVQEIIQRC----PECCELVDDRGWNVLHFAMVSFDKS---DLKHLLNEYPVVKNLIFEKD-VKGN   72 (335)
Q Consensus         1 ~TpLH~Aa~~G~~e~v~~Ll~~~----~~~~~~~d~~G~t~Lh~A~~~g~~~---~v~~Ll~~~~~~~~~~n~~d-~~G~   72 (335)
                      +||||+||+.|+.+.+.......    +.....+|.+|+||||+|+..|+.+   ++++|+    ..|+++|.+| .+|+
T Consensus        18 ~tpLh~A~~~g~~~~l~~~~~~~~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~e~v~~Ll----~~gadin~~~~~~g~   93 (154)
T PHA02736         18 ENILHYLCRNGGVTDLLAFKNAISDENRYLVLEYNRHGKQCVHIVSNPDKADPQEKLKLLM----EWGADINGKERVFGN   93 (154)
T ss_pred             CCHHHHHHHhCCHHHHHHHHHHhcchhHHHHHHhcCCCCEEEEeecccCchhHHHHHHHHH----HcCCCccccCCCCCC
Confidence            59999999999843221111111    1123446899999999999999864   577788    5789999998 4999


Q ss_pred             chhHHHHhcCCCCc-ccccccCcccccc-cccccccccCCCCCHHHHHHhcCCchHHHHHHHHHHcCCC
Q 019816           73 TPFHVLAAVCPDPR-PYNAGYGIIPYKI-AKGYYQAVNKQNISVEHINRYGFPELEKEIKELAKADGNG  139 (335)
Q Consensus        73 TpLH~Aa~~g~~~~-~lL~~~~~~~~~~-~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~~~~~  139 (335)
                      ||||+|+..++.++ ++|        +. .+++++.+|..|+||+|+|+..+..   ++++.|...++.
T Consensus        94 T~Lh~A~~~~~~~i~~~L--------l~~~g~d~n~~~~~g~tpL~~A~~~~~~---~i~~~Ll~~ga~  151 (154)
T PHA02736         94 TPLHIAVYTQNYELATWL--------CNQPGVNMEILNYAFKTPYYVACERHDA---KMMNILRAKGAQ  151 (154)
T ss_pred             cHHHHHHHhCCHHHHHHH--------HhCCCCCCccccCCCCCHHHHHHHcCCH---HHHHHHHHcCCC
Confidence            99999999999988 666        54 6899999999999999999987643   777777776654

>PHA02878 ankyrin repeat protein; Provisional

Probab=99.75  E-value=4.3e-18  Score=165.40  Aligned_cols=135  Identities=20%  Similarity=0.156  Sum_probs=103.8

Q ss_pred             CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcC-----------------------
Q 019816            1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEY-----------------------   57 (335)
Q Consensus         1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~-----------------------   57 (335)
                      .||||+|++.|+.++++.|+++|++++. +|.+|+||||+||..|+.++++.|++..                       
T Consensus        38 ~tPLh~A~~~g~~e~vk~Ll~~gadvn~-~d~~g~TpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~l~~a~~~~~~ei  116 (477)
T PHA02878         38 FIPLHQAVEARNLDVVKSLLTRGHNVNQ-PDHRDLTPLHIICKEPNKLGMKEMIRSINKCSVFYTLVAIKDAFNNRNVEI  116 (477)
T ss_pred             cchHHHHHHcCCHHHHHHHHHCCCCCCC-CCCCCCCHHHHHHHCccHhHHHHHHHHHhccccccchhhHHHHHHcCCHHH
Confidence            3799999999999999999999988865 7999999999999887766555444210                       


Q ss_pred             -------------------------------------CcccccccccCCC-CCchhHHHHhcCCCCc-ccccccCccccc
Q 019816           58 -------------------------------------PVVKNLIFEKDVK-GNTPFHVLAAVCPDPR-PYNAGYGIIPYK   98 (335)
Q Consensus        58 -------------------------------------~~~~~~~n~~d~~-G~TpLH~Aa~~g~~~~-~lL~~~~~~~~~   98 (335)
                                                           ...|+++|.+|.+ |+||||+|+..|+.++ ++|        +
T Consensus       117 ~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~Ll~~gadin~~~~~~g~tpLh~A~~~~~~~iv~~L--------l  188 (477)
T PHA02878        117 FKIILTNRYKNIQTIDLVYIDKKSKDDIIEAEITKLLLSYGADINMKDRHKGNTALHYATENKDQRLTELL--------L  188 (477)
T ss_pred             HHHHHhCcccCcccCcHHHHhhccchhhHHHHHHHHHHHcCCCCCccCCCCCCCHHHHHHhCCCHHHHHHH--------H
Confidence                                                 0245677888888 9999999999998888 777        7


Q ss_pred             ccccccccccCCCCCHHHHHHhcCCchHHHHHHHHHHcC--------CCCCCcchhh
Q 019816           99 IAKGYYQAVNKQNISVEHINRYGFPELEKEIKELAKADG--------NGQYPDGVIK  147 (335)
Q Consensus        99 ~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~~~--------~~~~p~~~~~  147 (335)
                      ..|++++.+|..|.||||+|+..+..   ++++.|.+.|        .|.+|++...
T Consensus       189 ~~gad~n~~d~~g~tpLh~A~~~~~~---~iv~~Ll~~ga~in~~d~~g~TpLh~A~  242 (477)
T PHA02878        189 SYGANVNIPDKTNNSPLHHAVKHYNK---PIVHILLENGASTDARDKCGNTPLHISV  242 (477)
T ss_pred             HCCCCCCCcCCCCCCHHHHHHHhCCH---HHHHHHHHcCCCCCCCCCCCCCHHHHHH
Confidence            78888888888888888888877643   6677666633        3456766544

>PHA02878 ankyrin repeat protein; Provisional

Probab=99.74  E-value=4.1e-18  Score=165.52  Aligned_cols=128  Identities=18%  Similarity=0.099  Sum_probs=108.8

Q ss_pred             CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHh
Q 019816            1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAA   80 (335)
Q Consensus         1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~   80 (335)
                      +||||+|+..|+.++++.|++.|++++. +|..|+||||+|+..|+.++++.|+    ..|+++|.+|..|+||||+|+.
T Consensus       169 ~tpLh~A~~~~~~~iv~~Ll~~gad~n~-~d~~g~tpLh~A~~~~~~~iv~~Ll----~~ga~in~~d~~g~TpLh~A~~  243 (477)
T PHA02878        169 NTALHYATENKDQRLTELLLSYGANVNI-PDKTNNSPLHHAVKHYNKPIVHILL----ENGASTDARDKCGNTPLHISVG  243 (477)
T ss_pred             CCHHHHHHhCCCHHHHHHHHHCCCCCCC-cCCCCCCHHHHHHHhCCHHHHHHHH----HcCCCCCCCCCCCCCHHHHHHH
Confidence            5899999999999999999999999865 7999999999999999999999999    5789999999999999999997


Q ss_pred             c-CCCCc-ccccccCcccccccccccccccC-CCCCHHHHHHhcCCchHHHHHHHHHHcCC--------CCCCcchh
Q 019816           81 V-CPDPR-PYNAGYGIIPYKIAKGYYQAVNK-QNISVEHINRYGFPELEKEIKELAKADGN--------GQYPDGVI  146 (335)
Q Consensus        81 ~-g~~~~-~lL~~~~~~~~~~~~~~~~~~n~-~G~Tpl~~a~~~~~~~~~~i~~~l~~~~~--------~~~p~~~~  146 (335)
                      . ++.++ ++|        +..|++++.++. .|.||||+|...     .++++.|.+.|+        |.+|++..
T Consensus       244 ~~~~~~iv~~L--------l~~gadvn~~~~~~g~TpLh~A~~~-----~~~v~~Ll~~gadin~~d~~g~TpL~~A  307 (477)
T PHA02878        244 YCKDYDILKLL--------LEHGVDVNAKSYILGLTALHSSIKS-----ERKLKLLLEYGADINSLNSYKLTPLSSA  307 (477)
T ss_pred             hcCCHHHHHHH--------HHcCCCCCccCCCCCCCHHHHHccC-----HHHHHHHHHCCCCCCCcCCCCCCHHHHH
Confidence            6 56677 888        889999999886 799999999432     256777777543        44566544

>PHA02875 ankyrin repeat protein; Provisional

Probab=99.74  E-value=8e-18  Score=160.59  Aligned_cols=123  Identities=20%  Similarity=0.085  Sum_probs=112.2

Q ss_pred             CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHh
Q 019816            1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAA   80 (335)
Q Consensus         1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~   80 (335)
                      +||||+|+..|+.++++.|++.|++++. +|..|+||||+|+..|+.++++.|+    ..+++++.+|..|+||||+|+.
T Consensus       103 ~tpL~~A~~~~~~~iv~~Ll~~gad~~~-~~~~g~tpLh~A~~~~~~~~v~~Ll----~~g~~~~~~d~~g~TpL~~A~~  177 (413)
T PHA02875        103 MTPLHLATILKKLDIMKLLIARGADPDI-PNTDKFSPLHLAVMMGDIKGIELLI----DHKACLDIEDCCGCTPLIIAMA  177 (413)
T ss_pred             CCHHHHHHHhCCHHHHHHHHhCCCCCCC-CCCCCCCHHHHHHHcCCHHHHHHHH----hcCCCCCCCCCCCCCHHHHHHH
Confidence            4899999999999999999999999865 7999999999999999999999999    5788999999999999999999


Q ss_pred             cCCCCc-ccccccCcccccccccccccccCCCC-CHHHHHHhcCCchHHHHHHHHHHcCCC
Q 019816           81 VCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNI-SVEHINRYGFPELEKEIKELAKADGNG  139 (335)
Q Consensus        81 ~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~-Tpl~~a~~~~~~~~~~i~~~l~~~~~~  139 (335)
                      .|+.++ ++|        +..|++++..+..|. ||+|+|+..+..   +++++|.+.|+.
T Consensus       178 ~g~~eiv~~L--------l~~ga~~n~~~~~~~~t~l~~A~~~~~~---~iv~~Ll~~gad  227 (413)
T PHA02875        178 KGDIAICKML--------LDSGANIDYFGKNGCVAALCYAIENNKI---DIVRLFIKRGAD  227 (413)
T ss_pred             cCCHHHHHHH--------HhCCCCCCcCCCCCCchHHHHHHHcCCH---HHHHHHHHCCcC
Confidence            999998 888        889999999998875 799999987744   888988887766

>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]

Probab=99.73  E-value=1.8e-18  Score=148.96  Aligned_cols=107  Identities=21%  Similarity=0.148  Sum_probs=98.8

Q ss_pred             chHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHhc
Q 019816            2 TALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAAV   81 (335)
Q Consensus         2 TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~~   81 (335)
                      +||||||+.||..+++.|+++|+.++. .+....||||+|+.+||.++|+.|+    ..++++|+.+..|+||||+||.-
T Consensus        36 splhwaakegh~aivemll~rgarvn~-tnmgddtplhlaaahghrdivqkll----~~kadvnavnehgntplhyacfw  110 (448)
T KOG0195|consen   36 SPLHWAAKEGHVAIVEMLLSRGARVNS-TNMGDDTPLHLAAAHGHRDIVQKLL----SRKADVNAVNEHGNTPLHYACFW  110 (448)
T ss_pred             chhhhhhhcccHHHHHHHHhccccccc-ccCCCCcchhhhhhcccHHHHHHHH----HHhcccchhhccCCCchhhhhhh
Confidence            799999999999999999999999866 6888899999999999999999999    57899999999999999999999


Q ss_pred             CCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhc
Q 019816           82 CPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYG  121 (335)
Q Consensus        82 g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~  121 (335)
                      |...+ +-|        ...|+.++.-|++|.||++.|...
T Consensus       111 gydqiaedl--------i~~ga~v~icnk~g~tpldkakp~  143 (448)
T KOG0195|consen  111 GYDQIAEDL--------ISCGAAVNICNKKGMTPLDKAKPM  143 (448)
T ss_pred             cHHHHHHHH--------HhccceeeecccCCCCchhhhchH
Confidence            99888 666        678999999999999999998754

>PHA02874 ankyrin repeat protein; Provisional

Probab=99.73  E-value=5e-18  Score=163.05  Aligned_cols=111  Identities=19%  Similarity=0.069  Sum_probs=102.2

Q ss_pred             CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHh
Q 019816            1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAA   80 (335)
Q Consensus         1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~   80 (335)
                      +||||+|+..|+.++++.|++.+++++. +|..|+||||+|+.+|+.++++.|+    ..|++++.+|..|+||||+|+.
T Consensus       125 ~T~Lh~A~~~~~~~~v~~Ll~~gad~n~-~d~~g~tpLh~A~~~~~~~iv~~Ll----~~g~~~n~~~~~g~tpL~~A~~  199 (434)
T PHA02874        125 KTFLHYAIKKGDLESIKMLFEYGADVNI-EDDNGCYPIHIAIKHNFFDIIKLLL----EKGAYANVKDNNGESPLHNAAE  199 (434)
T ss_pred             ccHHHHHHHCCCHHHHHHHHhCCCCCCC-cCCCCCCHHHHHHHCCcHHHHHHHH----HCCCCCCCCCCCCCCHHHHHHH
Confidence            4899999999999999999999999865 7999999999999999999999999    5788999999999999999999


Q ss_pred             cCCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhcCCc
Q 019816           81 VCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPE  124 (335)
Q Consensus        81 ~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~~  124 (335)
                      .|+.++ ++|        +..+.+++.++..|.||||+|+..+.+
T Consensus       200 ~g~~~iv~~L--------l~~g~~i~~~~~~g~TpL~~A~~~~~~  236 (434)
T PHA02874        200 YGDYACIKLL--------IDHGNHIMNKCKNGFTPLHNAIIHNRS  236 (434)
T ss_pred             cCCHHHHHHH--------HhCCCCCcCCCCCCCCHHHHHHHCChH
Confidence            999999 888        888999999999999999999976643

>PHA02884 ankyrin repeat protein; Provisional

Probab=99.72  E-value=1.4e-17  Score=150.16  Aligned_cols=110  Identities=9%  Similarity=-0.095  Sum_probs=99.3

Q ss_pred             chHhHHHhcCCHHHHHHHhhhCCCcccc---ccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccC-CCCCchhHH
Q 019816            2 TALHLAAGQGNDWIVQEIIQRCPECCEL---VDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKD-VKGNTPFHV   77 (335)
Q Consensus         2 TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~---~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d-~~G~TpLH~   77 (335)
                      ++||.|++.|+.++++.|+++|++++..   .|..|.||||+|+..++.+++++|+    ..|+++|.++ ..|+||||+
T Consensus        35 ~lL~~A~~~~~~eivk~LL~~GAdiN~~~~~sd~~g~TpLh~Aa~~~~~eivklLL----~~GADVN~~~~~~g~TpLh~  110 (300)
T PHA02884         35 NILYSSIKFHYTDIIDAILKLGADPEAPFPLSENSKTNPLIYAIDCDNDDAAKLLI----RYGADVNRYAEEAKITPLYI  110 (300)
T ss_pred             HHHHHHHHcCCHHHHHHHHHCCCCccccCcccCCCCCCHHHHHHHcCCHHHHHHHH----HcCCCcCcccCCCCCCHHHH
Confidence            5789999999999999999999998663   2468999999999999999999999    6899999874 579999999


Q ss_pred             HHhcCCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhcCC
Q 019816           78 LAAVCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFP  123 (335)
Q Consensus        78 Aa~~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~  123 (335)
                      |+..++.++ ++|        +..|++++.+|.+|.||+|+|++.+.
T Consensus       111 Aa~~~~~eivklL--------L~~GAdin~kd~~G~TpL~~A~~~~~  149 (300)
T PHA02884        111 SVLHGCLKCLEIL--------LSYGADINIQTNDMVTPIELALMICN  149 (300)
T ss_pred             HHHcCCHHHHHHH--------HHCCCCCCCCCCCCCCHHHHHHHhCC
Confidence            999999999 888        88999999999999999999997543

>PHA02874 ankyrin repeat protein; Provisional

Probab=99.72  E-value=2e-17  Score=158.79  Aligned_cols=132  Identities=18%  Similarity=0.060  Sum_probs=110.6

Q ss_pred             CchHhHHHhcCCHHHHHHHhhhCCCc----------------------cccccCCCCchHHHHHhcCCHhHHHHHHhcCC
Q 019816            1 MTALHLAAGQGNDWIVQEIIQRCPEC----------------------CELVDDRGWNVLHFAMVSFDKSDLKHLLNEYP   58 (335)
Q Consensus         1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~----------------------~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~   58 (335)
                      .||||.|+..|+.+++++|++++++.                      ...+|..|+||||+|+..|+.++++.|+    
T Consensus        69 ~t~L~~A~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~~~i~~ll~~g~d~n~~~~~g~T~Lh~A~~~~~~~~v~~Ll----  144 (434)
T PHA02874         69 PHPLLTAIKIGAHDIIKLLIDNGVDTSILPIPCIEKDMIKTILDCGIDVNIKDAELKTFLHYAIKKGDLESIKMLF----  144 (434)
T ss_pred             CCHHHHHHHcCCHHHHHHHHHCCCCCCcchhccCCHHHHHHHHHCcCCCCCCCCCCccHHHHHHHCCCHHHHHHHH----
Confidence            37888888888888888888776542                      1236889999999999999999999999    


Q ss_pred             cccccccccCCCCCchhHHHHhcCCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhcCCchHHHHHHHHHHcC
Q 019816           59 VVKNLIFEKDVKGNTPFHVLAAVCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPELEKEIKELAKADG  137 (335)
Q Consensus        59 ~~~~~~n~~d~~G~TpLH~Aa~~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~~~  137 (335)
                      ..|+++|.+|.+|+||||+|+..++.++ ++|        +..|++++.+|..|.||||+|+..+..   +++++|.+.+
T Consensus       145 ~~gad~n~~d~~g~tpLh~A~~~~~~~iv~~L--------l~~g~~~n~~~~~g~tpL~~A~~~g~~---~iv~~Ll~~g  213 (434)
T PHA02874        145 EYGADVNIEDDNGCYPIHIAIKHNFFDIIKLL--------LEKGAYANVKDNNGESPLHNAAEYGDY---ACIKLLIDHG  213 (434)
T ss_pred             hCCCCCCCcCCCCCCHHHHHHHCCcHHHHHHH--------HHCCCCCCCCCCCCCCHHHHHHHcCCH---HHHHHHHhCC
Confidence            5789999999999999999999999998 888        888999999999999999999988753   7788777754


Q ss_pred             --------CCCCCcchhh
Q 019816          138 --------NGQYPDGVIK  147 (335)
Q Consensus       138 --------~~~~p~~~~~  147 (335)
                              .|.+|++...
T Consensus       214 ~~i~~~~~~g~TpL~~A~  231 (434)
T PHA02874        214 NHIMNKCKNGFTPLHNAI  231 (434)
T ss_pred             CCCcCCCCCCCCHHHHHH
Confidence                    3456666543

>PHA02946 ankyin-like protein; Provisional

Probab=99.71  E-value=2.5e-17  Score=158.06  Aligned_cols=105  Identities=16%  Similarity=0.057  Sum_probs=59.6

Q ss_pred             CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCC--HhHHHHHHhcCCcccccccc-cCCCCCchhHH
Q 019816            1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFD--KSDLKHLLNEYPVVKNLIFE-KDVKGNTPFHV   77 (335)
Q Consensus         1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~--~~~v~~Ll~~~~~~~~~~n~-~d~~G~TpLH~   77 (335)
                      +||||+||+.|+.++++.|+++|++++. +|.+|+||||+|+..++  .+++++|+    ..|+++|. .|.+|.|||| 
T Consensus        73 ~TpLh~Aa~~g~~eiv~lLL~~GAdin~-~d~~g~TpLh~A~~~~~~~~e~v~lLl----~~Gadin~~~d~~g~tpL~-  146 (446)
T PHA02946         73 NYPLHIASKINNNRIVAMLLTHGADPNA-CDKQHKTPLYYLSGTDDEVIERINLLV----QYGAKINNSVDEEGCGPLL-  146 (446)
T ss_pred             CCHHHHHHHcCCHHHHHHHHHCcCCCCC-CCCCCCCHHHHHHHcCCchHHHHHHHH----HcCCCcccccCCCCCcHHH-
Confidence            4777777777777777777777777754 67777777777766543  56666666    34444442 3444444444 


Q ss_pred             HHhcCCCCc-ccccccCcccccccccccccccCCCCCHHHHHH
Q 019816           78 LAAVCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINR  119 (335)
Q Consensus        78 Aa~~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~  119 (335)
                      |+..++.++ ++|        +..|++++.+|+.|+||||+|+
T Consensus       147 aa~~~~~~vv~~L--------l~~gad~~~~d~~G~t~Lh~A~  181 (446)
T PHA02946        147 ACTDPSERVFKKI--------MSIGFEARIVDKFGKNHIHRHL  181 (446)
T ss_pred             HHHCCChHHHHHH--------HhccccccccCCCCCCHHHHHH
Confidence            223333333 333        3334444444444444444444

>PHA02859 ankyrin repeat protein; Provisional

Probab=99.70  E-value=4.1e-17  Score=141.21  Aligned_cols=137  Identities=15%  Similarity=0.055  Sum_probs=110.4

Q ss_pred             CchHhHHHhcC--CHHHHHHHhhhCCCccccccCCCCchHHHHHhc---CCHhHHHHHHhcCCcccccccccCCCCCchh
Q 019816            1 MTALHLAAGQG--NDWIVQEIIQRCPECCELVDDRGWNVLHFAMVS---FDKSDLKHLLNEYPVVKNLIFEKDVKGNTPF   75 (335)
Q Consensus         1 ~TpLH~Aa~~G--~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~---g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpL   75 (335)
                      +||||+|+..+  +.++++.|++++++++...+..|+||||+|+..   ++.+++++|+    ..|+++|.+|.+|.|||
T Consensus        52 ~TpLh~a~~~~~~~~eiv~~Ll~~gadvn~~~~~~g~TpLh~a~~~~~~~~~eiv~~Ll----~~gadin~~d~~G~TpL  127 (209)
T PHA02859         52 ETPIFSCLEKDKVNVEILKFLIENGADVNFKTRDNNLSALHHYLSFNKNVEPEILKILI----DSGSSITEEDEDGKNLL  127 (209)
T ss_pred             CCHHHHHHHcCCCCHHHHHHHHHCCCCCCccCCCCCCCHHHHHHHhCccccHHHHHHHH----HCCCCCCCcCCCCCCHH
Confidence            59999999854  899999999999999774346899999998764   4789999999    57899999999999999


Q ss_pred             HHHHhc--CCCCc-ccccccCcccccccccccccccCCCCCHHHHH-H-hcCCchHHHHHHHHHH----cCCCCCCcchh
Q 019816           76 HVLAAV--CPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHIN-R-YGFPELEKEIKELAKA----DGNGQYPDGVI  146 (335)
Q Consensus        76 H~Aa~~--g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a-~-~~~~~~~~~i~~~l~~----~~~~~~p~~~~  146 (335)
                      |+|+..  ++.++ ++|        ...|++++.+|.+|.||+|.+ . ....+..+.+++.-.+    +..|.+|++..
T Consensus       128 h~a~~~~~~~~~iv~~L--------i~~gadin~~d~~g~t~Lh~~a~~~~~~~iv~~Ll~~Gadi~~~d~~g~tpl~la  199 (209)
T PHA02859        128 HMYMCNFNVRINVIKLL--------IDSGVSFLNKDFDNNNILYSYILFHSDKKIFDFLTSLGIDINETNKSGYNCYDLI  199 (209)
T ss_pred             HHHHHhccCCHHHHHHH--------HHcCCCcccccCCCCcHHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHH
Confidence            999864  45666 888        889999999999999999964 4 3456778888874222    34566777765


Q ss_pred             hhh
Q 019816          147 KMN  149 (335)
Q Consensus       147 ~~~  149 (335)
                      ...
T Consensus       200 ~~~  202 (209)
T PHA02859        200 KFR  202 (209)
T ss_pred             hhh
Confidence            543

>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]

Probab=99.69  E-value=3.1e-17  Score=131.49  Aligned_cols=104  Identities=18%  Similarity=0.051  Sum_probs=84.4

Q ss_pred             HhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHhcCC
Q 019816            4 LHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAAVCP   83 (335)
Q Consensus         4 LH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~~g~   83 (335)
                      +.+|+..+.++.|+.||+..++..+.+|.+|.||||-|+.+|+.++++.|+    ..|++.+.+..+|+||||-||+-++
T Consensus        67 ~lwaae~nrl~eV~~lL~e~an~vNtrD~D~YTpLHRAaYn~h~div~~ll----~~gAn~~a~T~~GWTPLhSAckWnN  142 (228)
T KOG0512|consen   67 LLWAAEKNRLTEVQRLLSEKANHVNTRDEDEYTPLHRAAYNGHLDIVHELL----LSGANKEAKTNEGWTPLHSACKWNN  142 (228)
T ss_pred             HHHHHhhccHHHHHHHHHhccccccccccccccHHHHHHhcCchHHHHHHH----HccCCcccccccCccchhhhhcccc
Confidence            457888888888888888888877778888888888888888888888877    5678888888888888888888888


Q ss_pred             CCc-ccccccCcccccccccccccccCCCCCHHHHHH
Q 019816           84 DPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINR  119 (335)
Q Consensus        84 ~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~  119 (335)
                      .++ .+|        +..|+|+|+..+..+||||+++
T Consensus       143 ~~va~~L--------LqhgaDVnA~t~g~ltpLhlaa  171 (228)
T KOG0512|consen  143 FEVAGRL--------LQHGADVNAQTKGLLTPLHLAA  171 (228)
T ss_pred             hhHHHHH--------HhccCcccccccccchhhHHhh
Confidence            887 666        6778888888888888888887

>PHA03100 ankyrin repeat protein; Provisional

Probab=99.69  E-value=5.8e-17  Score=157.55  Aligned_cols=121  Identities=19%  Similarity=0.130  Sum_probs=86.8

Q ss_pred             CchHhHHHhcC--CHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCC------C
Q 019816            1 MTALHLAAGQG--NDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKG------N   72 (335)
Q Consensus         1 ~TpLH~Aa~~G--~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G------~   72 (335)
                      +||||+|+..|  +.++++.|+++|++++. +|..|+||||+|+..|+.+++++|+    ..|++++..|..|      .
T Consensus       142 ~t~L~~A~~~~~~~~~iv~~Ll~~g~din~-~d~~g~tpL~~A~~~~~~~iv~~Ll----~~ga~~~~~~~~~~~~~~~~  216 (480)
T PHA03100        142 ENLLHLYLESNKIDLKILKLLIDKGVDINA-KNRYGYTPLHIAVEKGNIDVIKFLL----DNGADINAGDIETLLFTIFE  216 (480)
T ss_pred             CcHHHHHHHcCCChHHHHHHHHHCCCCccc-ccCCCCCHHHHHHHhCCHHHHHHHH----HcCCCccCCCCCCCcHHHHH
Confidence            47888888888  78888888888877754 5778888888888888888888877    4566777777776      7


Q ss_pred             chhHHHHhcCC--CCc-ccccccCcccccccccccccccCCCCCHHHHHHhcCCchHHHHHHHHHHcC
Q 019816           73 TPFHVLAAVCP--DPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPELEKEIKELAKADG  137 (335)
Q Consensus        73 TpLH~Aa~~g~--~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~~~  137 (335)
                      ||||.|+..++  .++ ++|        +..|++++.+|..|.||||+|+..+..   +++++|.+.|
T Consensus       217 t~l~~a~~~~~~~~~iv~~L--------l~~g~din~~d~~g~TpL~~A~~~~~~---~iv~~Ll~~g  273 (480)
T PHA03100        217 TPLHIAACYNEITLEVVNYL--------LSYGVPINIKDVYGFTPLHYAVYNNNP---EFVKYLLDLG  273 (480)
T ss_pred             hHHHHHHHhCcCcHHHHHHH--------HHcCCCCCCCCCCCCCHHHHHHHcCCH---HHHHHHHHcC
Confidence            77777777776  555 666        666777777777777777777765532   5566555543

>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]

Probab=99.69  E-value=3.5e-17  Score=131.23  Aligned_cols=109  Identities=21%  Similarity=0.065  Sum_probs=98.8

Q ss_pred             chHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHhc
Q 019816            2 TALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAAV   81 (335)
Q Consensus         2 TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~~   81 (335)
                      ||||-|+.+||.++++.|+..+++... +...||||||-||...+.+++..|+    ..|+++|++.+...||||+||..
T Consensus        99 TpLHRAaYn~h~div~~ll~~gAn~~a-~T~~GWTPLhSAckWnN~~va~~LL----qhgaDVnA~t~g~ltpLhlaa~~  173 (228)
T KOG0512|consen   99 TPLHRAAYNGHLDIVHELLLSGANKEA-KTNEGWTPLHSACKWNNFEVAGRLL----QHGADVNAQTKGLLTPLHLAAGN  173 (228)
T ss_pred             cHHHHHHhcCchHHHHHHHHccCCccc-ccccCccchhhhhcccchhHHHHHH----hccCcccccccccchhhHHhhcc
Confidence            899999999999999999999999865 7899999999999999999999999    68999999999999999999988


Q ss_pred             CCCCc--ccccccCcccccccccccccccCCCCCHHHHHHhcC
Q 019816           82 CPDPR--PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGF  122 (335)
Q Consensus        82 g~~~~--~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~  122 (335)
                      .+...  .+|       +..+.++...+|+.+.||+++|.+-+
T Consensus       174 rn~r~t~~~L-------l~dryi~pg~~nn~eeta~~iARRT~  209 (228)
T KOG0512|consen  174 RNSRDTLELL-------LHDRYIHPGLKNNLEETAFDIARRTS  209 (228)
T ss_pred             cchHHHHHHH-------hhccccChhhhcCccchHHHHHHHhh
Confidence            77665  443       17788999999999999999999654

>PHA02795 ankyrin-like protein; Provisional

Probab=99.69  E-value=7.5e-17  Score=151.16  Aligned_cols=126  Identities=11%  Similarity=-0.115  Sum_probs=94.6

Q ss_pred             chHhHHHhcCCHHHHHHHhhhCCCcccccc-----CCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhH
Q 019816            2 TALHLAAGQGNDWIVQEIIQRCPECCELVD-----DRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFH   76 (335)
Q Consensus         2 TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d-----~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH   76 (335)
                      ||||.|+..|+.+++++|+++|++..+..+     ..|.+++|.|+.+++.+++++|+    ..|+++|.+|.+|+||||
T Consensus       151 t~lh~A~~~~~~eIVk~Lls~Ga~~~n~~~~~l~~~~~~t~l~~a~~~~~~eIve~LI----s~GADIN~kD~~G~TpLh  226 (437)
T PHA02795        151 NAYFRGICKKESSVVEFILNCGIPDENDVKLDLYKIIQYTRGFLVDEPTVLEIYKLCI----PYIEDINQLDAGGRTLLY  226 (437)
T ss_pred             CHHHHHHHcCcHHHHHHHHhcCCcccccccchhhhhhccchhHHHHhcCHHHHHHHHH----hCcCCcCcCCCCCCCHHH
Confidence            566666666666666666666643322111     23556666666666666777776    478899999999999999


Q ss_pred             HHHhcCCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhcCC-----chHHHHHHHHHHcCCC
Q 019816           77 VLAAVCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFP-----ELEKEIKELAKADGNG  139 (335)
Q Consensus        77 ~Aa~~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~-----~~~~~i~~~l~~~~~~  139 (335)
                      +|+..|+.++ ++|        +..|++++.+|..|.||||+|+..+.     +...++++.|.+.++.
T Consensus       227 ~Aa~~g~~eiVelL--------L~~GAdIN~~d~~G~TpLh~Aa~~g~~~~~~~~~~eIvelLL~~gad  287 (437)
T PHA02795        227 RAIYAGYIDLVSWL--------LENGANVNAVMSNGYTCLDVAVDRGSVIARRETHLKILEILLREPLS  287 (437)
T ss_pred             HHHHcCCHHHHHHH--------HHCCCCCCCcCCCCCCHHHHHHHcCCcccccccHHHHHHHHHhCCCC
Confidence            9999999999 888        89999999999999999999997763     2356888888876654

>PHA02946 ankyin-like protein; Provisional

Probab=99.69  E-value=1.2e-16  Score=153.36  Aligned_cols=134  Identities=14%  Similarity=0.027  Sum_probs=100.8

Q ss_pred             CchHhHHHhcC--CHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHH
Q 019816            1 MTALHLAAGQG--NDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVL   78 (335)
Q Consensus         1 ~TpLH~Aa~~G--~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~A   78 (335)
                      +||||+|+..+  +.++++.|++++++++...|.+|+|||| |+..++.++++.|+    ..|++++.+|..|+||||+|
T Consensus       106 ~TpLh~A~~~~~~~~e~v~lLl~~Gadin~~~d~~g~tpL~-aa~~~~~~vv~~Ll----~~gad~~~~d~~G~t~Lh~A  180 (446)
T PHA02946        106 KTPLYYLSGTDDEVIERINLLVQYGAKINNSVDEEGCGPLL-ACTDPSERVFKKIM----SIGFEARIVDKFGKNHIHRH  180 (446)
T ss_pred             CCHHHHHHHcCCchHHHHHHHHHcCCCcccccCCCCCcHHH-HHHCCChHHHHHHH----hccccccccCCCCCCHHHHH
Confidence            58999998766  4788999999999887667889999997 66678888888888    56788888888888888888


Q ss_pred             HhcCCCC--c-ccccccCcccccccccccccccCCCCCHHHHHHhcCCchHHHHHHHHHH-------cCCCCCCcchhhh
Q 019816           79 AAVCPDP--R-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPELEKEIKELAKA-------DGNGQYPDGVIKM  148 (335)
Q Consensus        79 a~~g~~~--~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~-------~~~~~~p~~~~~~  148 (335)
                      +..++..  + ++|        ...|++++.+|.+|+||||+|+..+.. ..++++.|..       +..|.+|++....
T Consensus       181 ~~~~~~~~~~v~~L--------l~~Gadin~~d~~G~TpLH~Aa~~~~~-~~~iv~lLl~gadin~~d~~G~TpLh~A~~  251 (446)
T PHA02946        181 LMSDNPKASTISWM--------MKLGISPSKPDHDGNTPLHIVCSKTVK-NVDIINLLLPSTDVNKQNKFGDSPLTLLIK  251 (446)
T ss_pred             HHhcCCCHHHHHHH--------HHcCCCCcccCCCCCCHHHHHHHcCCC-cHHHHHHHHcCCCCCCCCCCCCCHHHHHHH
Confidence            8776653  3 677        778888888888888888888866422 1244554443       2345677765443

>PHA03095 ankyrin-like protein; Provisional

Probab=99.68  E-value=1.2e-16  Score=154.92  Aligned_cols=124  Identities=18%  Similarity=0.131  Sum_probs=105.7

Q ss_pred             CchHhHHHhcC---CHHHHHHHhhhCCCccccccCCCCchHHHHHhcC-CHhHHHHHHhcCCcccccccccCCCCCchhH
Q 019816            1 MTALHLAAGQG---NDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSF-DKSDLKHLLNEYPVVKNLIFEKDVKGNTPFH   76 (335)
Q Consensus         1 ~TpLH~Aa~~G---~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g-~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH   76 (335)
                      +||||+|+..|   +.++++.|++.|++++. +|..|+||||+|+.+| +.+++++|+    ..|+++|.+|.+|+||||
T Consensus        48 ~t~Lh~a~~~~~~~~~~iv~~Ll~~Gadin~-~~~~g~TpLh~A~~~~~~~~iv~lLl----~~ga~in~~~~~g~tpLh  122 (471)
T PHA03095         48 KTPLHLYLHYSSEKVKDIVRLLLEAGADVNA-PERCGFTPLHLYLYNATTLDVIKLLI----KAGADVNAKDKVGRTPLH  122 (471)
T ss_pred             CCHHHHHHHhcCCChHHHHHHHHHCCCCCCC-CCCCCCCHHHHHHHcCCcHHHHHHHH----HcCCCCCCCCCCCCCHHH
Confidence            58999999999   99999999999999966 7889999999999999 599999999    578999999999999999


Q ss_pred             HHHh--cCCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhcCCchHHHHHHHHHHcCC
Q 019816           77 VLAA--VCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPELEKEIKELAKADGN  138 (335)
Q Consensus        77 ~Aa~--~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~~~~  138 (335)
                      +|+.  .++.++ ++|        +..|++++.+|..|.||+|+|...+.. ..++++.|.+.|+
T Consensus       123 ~a~~~~~~~~~iv~~L--------l~~gad~~~~d~~g~tpL~~a~~~~~~-~~~iv~~Ll~~g~  178 (471)
T PHA03095        123 VYLSGFNINPKVIRLL--------LRKGADVNALDLYGMTPLAVLLKSRNA-NVELLRLLIDAGA  178 (471)
T ss_pred             HHhhCCcCCHHHHHHH--------HHcCCCCCccCCCCCCHHHHHHHcCCC-CHHHHHHHHHcCC
Confidence            9994  345556 778        888999999999999999999866522 3467777776543

>PLN03192 Voltage-dependent potassium channel; Provisional

Probab=99.68  E-value=1.1e-16  Score=164.80  Aligned_cols=130  Identities=15%  Similarity=0.070  Sum_probs=107.3

Q ss_pred             chHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHhc
Q 019816            2 TALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAAV   81 (335)
Q Consensus         2 TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~~   81 (335)
                      ++||.||..|+.++++.|++.+.+++. .|.+|+||||+|+.+|+.++++.|+    ..|+++|.+|.+|+||||+|+..
T Consensus       527 ~~L~~Aa~~g~~~~l~~Ll~~G~d~n~-~d~~G~TpLh~Aa~~g~~~~v~~Ll----~~gadin~~d~~G~TpL~~A~~~  601 (823)
T PLN03192        527 SNLLTVASTGNAALLEELLKAKLDPDI-GDSKGRTPLHIAASKGYEDCVLVLL----KHACNVHIRDANGNTALWNAISA  601 (823)
T ss_pred             hHHHHHHHcCCHHHHHHHHHCCCCCCC-CCCCCCCHHHHHHHcChHHHHHHHH----hcCCCCCCcCCCCCCHHHHHHHh
Confidence            579999999999999999999998865 7999999999999999999999999    57889999999999999988888


Q ss_pred             CCCCc-ccccccCc-----------------------ccccccccccccccCCCCCHHHHHHhcCCchHHHHHHHHHHcC
Q 019816           82 CPDPR-PYNAGYGI-----------------------IPYKIAKGYYQAVNKQNISVEHINRYGFPELEKEIKELAKADG  137 (335)
Q Consensus        82 g~~~~-~lL~~~~~-----------------------~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~~~  137 (335)
                      |+.++ ++|..++.                       ..+++.|+|++.+|.+|+||||+|+..+.   .++++.|.++|
T Consensus       602 g~~~iv~~L~~~~~~~~~~~~~~~L~~Aa~~g~~~~v~~Ll~~Gadin~~d~~G~TpLh~A~~~g~---~~iv~~Ll~~G  678 (823)
T PLN03192        602 KHHKIFRILYHFASISDPHAAGDLLCTAAKRNDLTAMKELLKQGLNVDSEDHQGATALQVAMAEDH---VDMVRLLIMNG  678 (823)
T ss_pred             CCHHHHHHHHhcCcccCcccCchHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCc---HHHHHHHHHcC
Confidence            87776 44311100                       00156789999999999999999998874   48888888877


Q ss_pred             CC
Q 019816          138 NG  139 (335)
Q Consensus       138 ~~  139 (335)
                      +.
T Consensus       679 Ad  680 (823)
T PLN03192        679 AD  680 (823)
T ss_pred             CC
Confidence            65

>PHA02716 CPXV016; CPX019; EVM010; Provisional

Probab=99.68  E-value=1.6e-16  Score=158.53  Aligned_cols=131  Identities=16%  Similarity=0.067  Sum_probs=103.3

Q ss_pred             CchHhHHHhcCC--HHHHHHHhhhCCCccccccCCCCchHHHHH------------------------------------
Q 019816            1 MTALHLAAGQGN--DWIVQEIIQRCPECCELVDDRGWNVLHFAM------------------------------------   42 (335)
Q Consensus         1 ~TpLH~Aa~~G~--~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~------------------------------------   42 (335)
                      +||||+|++.|+  .++++.|+++|++++. +|..|+||||+|+                                    
T Consensus       213 ~TPLH~Aa~~g~~~~eIVklLLe~GADVN~-kD~~G~TPLh~Ai~~a~n~~~EIvkiLie~~d~n~~~~~~~~L~~~i~A  291 (764)
T PHA02716        213 ITPLHTYLITGNVCASVIKKIIELGGDMDM-KCVNGMSPIMTYIINIDNINPEITNIYIESLDGNKVKNIPMILHSYITL  291 (764)
T ss_pred             CCHHHHHHHcCCCCHHHHHHHHHcCCCCCC-CCCCCCCHHHHHHHhhhccCHHHHHHHHHhccccccccchhhhHHHHHH
Confidence            589999999995  4899999999999865 7999999999753                                    


Q ss_pred             -hcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHhc--CCCCc-ccccccCcccccccccccccccCCCCCHHHHH
Q 019816           43 -VSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAAV--CPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHIN  118 (335)
Q Consensus        43 -~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~~--g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a  118 (335)
                       .+|+.++++.|+    ..|+++|.+|.+|+||||+|+..  ++.++ ++|        +..|++++.+|..|+||||+|
T Consensus       292 A~~g~leiVklLL----e~GAdIN~kD~~G~TPLH~Aaa~~~~~~eIVklL--------Le~GADIN~kD~~G~TPLH~A  359 (764)
T PHA02716        292 ARNIDISVVYSFL----QPGVKLHYKDSAGRTCLHQYILRHNISTDIIKLL--------HEYGNDLNEPDNIGNTVLHTY  359 (764)
T ss_pred             HHcCCHHHHHHHH----hCCCceeccCCCCCCHHHHHHHHhCCCchHHHHH--------HHcCCCCccCCCCCCCHHHHH
Confidence             345667777777    57889999999999999998754  45667 888        888999999999999999998


Q ss_pred             HhcC-----------CchHHHHHHHHHHcC--------CCCCCcc
Q 019816          119 RYGF-----------PELEKEIKELAKADG--------NGQYPDG  144 (335)
Q Consensus       119 ~~~~-----------~~~~~~i~~~l~~~~--------~~~~p~~  144 (335)
                      +...           .....++++.|.+.|        .|.+|++
T Consensus       360 ~~~lav~~~ld~~~~~~~~~eVVklLL~~GADIn~kn~~G~TPLh  404 (764)
T PHA02716        360 LSMLSVVNILDPETDNDIRLDVIQCLISLGADITAVNCLGYTPLT  404 (764)
T ss_pred             HHhhhhhccccccccccChHHHHHHHHHCCCCCCCcCCCCCChHH
Confidence            6420           112457888877754        3567876

>PHA02716 CPXV016; CPX019; EVM010; Provisional

Probab=99.67  E-value=1.5e-16  Score=158.69  Aligned_cols=132  Identities=13%  Similarity=-0.016  Sum_probs=104.3

Q ss_pred             CchHhHHHh--cCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCC--HhHHHHHHhcCCcccccccccCCCCCchhH
Q 019816            1 MTALHLAAG--QGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFD--KSDLKHLLNEYPVVKNLIFEKDVKGNTPFH   76 (335)
Q Consensus         1 ~TpLH~Aa~--~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~--~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH   76 (335)
                      +||||.|+.  .++.+++++|+++|++++. +|..|+||||+|+..|+  .++++.|+    ..|+++|.+|.+|+||||
T Consensus       178 ~TpLH~A~~n~~~~~eIVklLLe~GADVN~-kD~~G~TPLH~Aa~~g~~~~eIVklLL----e~GADVN~kD~~G~TPLh  252 (764)
T PHA02716        178 YGILHAYLGNMYVDIDILEWLCNNGVNVNL-QNNHLITPLHTYLITGNVCASVIKKII----ELGGDMDMKCVNGMSPIM  252 (764)
T ss_pred             CcHHHHHHHhccCCHHHHHHHHHcCCCCCC-CCCCCCCHHHHHHHcCCCCHHHHHHHH----HcCCCCCCCCCCCCCHHH
Confidence            589999865  4689999999999999966 79999999999999995  48999999    679999999999999999


Q ss_pred             HHHh-------------------------------------cCCCCc-ccccccCcccccccccccccccCCCCCHHHHH
Q 019816           77 VLAA-------------------------------------VCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHIN  118 (335)
Q Consensus        77 ~Aa~-------------------------------------~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a  118 (335)
                      .|+.                                     .|+.++ ++|        +..|++++.+|.+|+||||+|
T Consensus       253 ~Ai~~a~n~~~EIvkiLie~~d~n~~~~~~~~L~~~i~AA~~g~leiVklL--------Le~GAdIN~kD~~G~TPLH~A  324 (764)
T PHA02716        253 TYIINIDNINPEITNIYIESLDGNKVKNIPMILHSYITLARNIDISVVYSF--------LQPGVKLHYKDSAGRTCLHQY  324 (764)
T ss_pred             HHHHhhhccCHHHHHHHHHhccccccccchhhhHHHHHHHHcCCHHHHHHH--------HhCCCceeccCCCCCCHHHHH
Confidence            8743                                     233333 445        678999999999999999998


Q ss_pred             HhcCCchHHHHHHHHHHcC--------CCCCCcchh
Q 019816          119 RYGFPELEKEIKELAKADG--------NGQYPDGVI  146 (335)
Q Consensus       119 ~~~~~~~~~~i~~~l~~~~--------~~~~p~~~~  146 (335)
                      +..+.. ..+++++|.+.|        .|.+|+|..
T Consensus       325 aa~~~~-~~eIVklLLe~GADIN~kD~~G~TPLH~A  359 (764)
T PHA02716        325 ILRHNI-STDIIKLLHEYGNDLNEPDNIGNTVLHTY  359 (764)
T ss_pred             HHHhCC-CchHHHHHHHcCCCCccCCCCCCCHHHHH
Confidence            743211 235667666633        456788754

>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]

Probab=99.67  E-value=7.7e-17  Score=133.95  Aligned_cols=120  Identities=13%  Similarity=-0.028  Sum_probs=110.2

Q ss_pred             CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHh
Q 019816            1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAA   80 (335)
Q Consensus         1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~   80 (335)
                      .|||.||+.+|++++|++||+.|+|+.. ..+...++|.+|+..|..++|+.|+    .++.++|..|.+|-|||-+|++
T Consensus       161 fTpLiWAaa~G~i~vV~fLL~~GAdp~~-lgk~resALsLAt~ggytdiV~lLL----~r~vdVNvyDwNGgTpLlyAvr  235 (296)
T KOG0502|consen  161 FTPLIWAAAKGHIPVVQFLLNSGADPDA-LGKYRESALSLATRGGYTDIVELLL----TREVDVNVYDWNGGTPLLYAVR  235 (296)
T ss_pred             chHhHHHHhcCchHHHHHHHHcCCChhh-hhhhhhhhHhHHhcCChHHHHHHHH----hcCCCcceeccCCCceeeeeec
Confidence            3899999999999999999999999855 6888899999999999999999999    6789999999999999999999


Q ss_pred             cCCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhcCCchHHHHHHHH
Q 019816           81 VCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPELEKEIKELA  133 (335)
Q Consensus        81 ~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l  133 (335)
                      -++.+| +.|        +..|+|++.-+..|.+++++|+..|...++.+++..
T Consensus       236 gnhvkcve~L--------l~sGAd~t~e~dsGy~~mdlAValGyr~Vqqvie~h  281 (296)
T KOG0502|consen  236 GNHVKCVESL--------LNSGADVTQEDDSGYWIMDLAVALGYRIVQQVIEKH  281 (296)
T ss_pred             CChHHHHHHH--------HhcCCCcccccccCCcHHHHHHHhhhHHHHHHHHHH
Confidence            999999 777        889999999999999999999988877777777643

>KOG0508 consensus Ankyrin repeat protein [General function prediction only]

Probab=99.66  E-value=5.5e-17  Score=148.19  Aligned_cols=108  Identities=18%  Similarity=0.063  Sum_probs=93.2

Q ss_pred             chHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHhc
Q 019816            2 TALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAAV   81 (335)
Q Consensus         2 TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~~   81 (335)
                      |||-.||..||+|++++|+++++|+. ..|..|.|+||+||..|+.+++++|+    +.|+++|.++..|||+||.++..
T Consensus       119 tPLraACfDG~leivKyLvE~gad~~-IanrhGhTcLmIa~ykGh~~I~qyLl----e~gADvn~ks~kGNTALH~caEs  193 (615)
T KOG0508|consen  119 TPLRAACFDGHLEIVKYLVEHGADPE-IANRHGHTCLMIACYKGHVDIAQYLL----EQGADVNAKSYKGNTALHDCAES  193 (615)
T ss_pred             ccHHHHHhcchhHHHHHHHHcCCCCc-ccccCCCeeEEeeeccCchHHHHHHH----HhCCCcchhcccCchHHHhhhhc
Confidence            89999999999999999999999884 47999999999999999999999999    57899999999999999999999


Q ss_pred             CCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhcCC
Q 019816           82 CPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFP  123 (335)
Q Consensus        82 g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~  123 (335)
                      |+.++ ++|        +..++.++ +|..|.|||-.|...+.
T Consensus       194 G~vdivq~L--------l~~ga~i~-~d~~GmtPL~~Aa~tG~  227 (615)
T KOG0508|consen  194 GSVDIVQLL--------LKHGAKID-VDGHGMTPLLLAAVTGH  227 (615)
T ss_pred             ccHHHHHHH--------HhCCceee-ecCCCCchHHHHhhhcc
Confidence            99999 877        66665554 45669999999986664

>PHA02876 ankyrin repeat protein; Provisional

Probab=99.66  E-value=8e-17  Score=163.11  Aligned_cols=111  Identities=23%  Similarity=0.095  Sum_probs=100.0

Q ss_pred             CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHH--------------------------------------
Q 019816            1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAM--------------------------------------   42 (335)
Q Consensus         1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~--------------------------------------   42 (335)
                      .||||+|+..||.|+|+.|++.+|+.....|..|+||||+|+                                      
T Consensus        42 ~t~LH~A~~~g~~e~V~~ll~~~~~~~~~~~~~~~tpLh~a~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  121 (682)
T PHA02876         42 FTAIHQALQLRQIDIVEEIIQQNPELIYITDHKCHSTLHTICIIPNVMDIVISLTLDCDIILDIKYASIILNKHKLDEAC  121 (682)
T ss_pred             chHHHHHHHHHhhhHHHHHHHhCcccchhhchhhccccccccCCCCccccccccccchhhcccccHHHHHHHHHHHHHHH
Confidence            489999999999999999999999987778999999999777                                      


Q ss_pred             --------------------------------hcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHhcCCCCc-ccc
Q 019816           43 --------------------------------VSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAAVCPDPR-PYN   89 (335)
Q Consensus        43 --------------------------------~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~~g~~~~-~lL   89 (335)
                                                      ..++.+++++|+    ..|+++|.+|.+|+||||+|+..|+.++ ++|
T Consensus       122 ~~il~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~i~k~Ll----~~Gadvn~~d~~G~TpLh~Aa~~G~~~iv~~L  197 (682)
T PHA02876        122 IHILKEAISGNDIHYDKINESIEYMKLIKERIQQDELLIAEMLL----EGGADVNAKDIYCITPIHYAAERGNAKMVNLL  197 (682)
T ss_pred             HHHHHHHhcCCcccHHhhccchhhhHHHHHHHHCCcHHHHHHHH----hCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHH
Confidence                                            335566777777    5789999999999999999999999999 888


Q ss_pred             cccCcccccccccccccccCCCCCHHHHHHhcCC
Q 019816           90 AGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFP  123 (335)
Q Consensus        90 ~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~  123 (335)
                              +..|++++..+.+|.||+|.|+..+.
T Consensus       198 --------L~~Gad~n~~~~~g~t~L~~A~~~~~  223 (682)
T PHA02876        198 --------LSYGADVNIIALDDLSVLECAVDSKN  223 (682)
T ss_pred             --------HHCCCCcCccCCCCCCHHHHHHHcCC
Confidence                    88999999999999999999997664

>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain

Probab=99.66  E-value=1e-16  Score=119.39  Aligned_cols=88  Identities=25%  Similarity=0.169  Sum_probs=78.6

Q ss_pred             HhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHhcCC
Q 019816            4 LHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAAVCP   83 (335)
Q Consensus         4 LH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~~g~   83 (335)
                      ||+||+.|+.++++.|++.+++...     |+||||+|+.+|+.+++++|+    ..+.+++.+|.+|+||||+|+..|+
T Consensus         1 L~~A~~~~~~~~~~~ll~~~~~~~~-----~~~~l~~A~~~~~~~~~~~Ll----~~g~~~~~~~~~g~t~L~~A~~~~~   71 (89)
T PF12796_consen    1 LHIAAQNGNLEILKFLLEKGADINL-----GNTALHYAAENGNLEIVKLLL----ENGADINSQDKNGNTALHYAAENGN   71 (89)
T ss_dssp             HHHHHHTTTHHHHHHHHHTTSTTTS-----SSBHHHHHHHTTTHHHHHHHH----HTTTCTT-BSTTSSBHHHHHHHTTH
T ss_pred             CHHHHHcCCHHHHHHHHHCcCCCCC-----CCCHHHHHHHcCCHHHHHHHH----HhcccccccCCCCCCHHHHHHHcCC
Confidence            7999999999999999998876633     999999999999999999999    5788999999999999999999999


Q ss_pred             CCc-ccccccCccccccccccccccc
Q 019816           84 DPR-PYNAGYGIIPYKIAKGYYQAVN  108 (335)
Q Consensus        84 ~~~-~lL~~~~~~~~~~~~~~~~~~n  108 (335)
                      .++ ++|        .+.|++++.+|
T Consensus        72 ~~~~~~L--------l~~g~~~~~~n   89 (89)
T PF12796_consen   72 LEIVKLL--------LEHGADVNIRN   89 (89)
T ss_dssp             HHHHHHH--------HHTTT-TTSS-
T ss_pred             HHHHHHH--------HHcCCCCCCcC
Confidence            999 888        78899998876

These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....

>PHA03095 ankyrin-like protein; Provisional

Probab=99.66  E-value=2.6e-16  Score=152.60  Aligned_cols=131  Identities=22%  Similarity=0.151  Sum_probs=91.7

Q ss_pred             CchHhHHHhcC--CHHHHHHHhhhCCCccccccCCCCchHHHHHhc--CCHhHHHHHHhcCCcccccccccCCCCCchhH
Q 019816            1 MTALHLAAGQG--NDWIVQEIIQRCPECCELVDDRGWNVLHFAMVS--FDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFH   76 (335)
Q Consensus         1 ~TpLH~Aa~~G--~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~--g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH   76 (335)
                      +||||+|+..+  +.++++.|++++++.... |..|+||||+|+..  ++.++++.|+    ..|++++.+|.+|+||||
T Consensus       153 ~tpL~~a~~~~~~~~~iv~~Ll~~g~~~~~~-d~~g~t~Lh~~~~~~~~~~~i~~~Ll----~~g~~~~~~d~~g~tpLh  227 (471)
T PHA03095        153 MTPLAVLLKSRNANVELLRLLIDAGADVYAV-DDRFRSLLHHHLQSFKPRARIVRELI----RAGCDPAATDMLGNTPLH  227 (471)
T ss_pred             CCHHHHHHHcCCCCHHHHHHHHHcCCCCccc-CCCCCCHHHHHHHHCCCcHHHHHHHH----HcCCCCcccCCCCCCHHH
Confidence            47888877765  577888888888877664 77888888887764  5567777777    467778888888888888


Q ss_pred             HHHhcCCCCc---ccccccCcccccccccccccccCCCCCHHHHHHhcCCchHHHHHHHHHHcC--------CCCCCcch
Q 019816           77 VLAAVCPDPR---PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPELEKEIKELAKADG--------NGQYPDGV  145 (335)
Q Consensus        77 ~Aa~~g~~~~---~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~~~--------~~~~p~~~  145 (335)
                      +|+..|+...   ..+        ...|++++.+|.+|+||||+|+..+..   ++++.|.+.|        .|.+|++.
T Consensus       228 ~Aa~~~~~~~~~v~~l--------l~~g~din~~d~~g~TpLh~A~~~~~~---~~v~~LL~~gad~n~~~~~g~tpl~~  296 (471)
T PHA03095        228 SMATGSSCKRSLVLPL--------LIAGISINARNRYGQTPLHYAAVFNNP---RACRRLIALGADINAVSSDGNTPLSL  296 (471)
T ss_pred             HHHhcCCchHHHHHHH--------HHcCCCCCCcCCCCCCHHHHHHHcCCH---HHHHHHHHcCCCCcccCCCCCCHHHH
Confidence            8887776542   444        566778888888888888888866543   5555555533        34556655


Q ss_pred             hh
Q 019816          146 IK  147 (335)
Q Consensus       146 ~~  147 (335)
                      ..
T Consensus       297 A~  298 (471)
T PHA03095        297 MV  298 (471)
T ss_pred             HH
Confidence            43

>PHA03100 ankyrin repeat protein; Provisional

Probab=99.65  E-value=3.3e-16  Score=152.23  Aligned_cols=120  Identities=17%  Similarity=0.055  Sum_probs=71.7

Q ss_pred             chHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHH-----HHhcCCHhHHHHHHhcCCcccccccccCCCCCchhH
Q 019816            2 TALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHF-----AMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFH   76 (335)
Q Consensus         2 TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~-----A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH   76 (335)
                      ||||.|++.|+.++++.|+++|+++.. .+..|.||||+     |+..++.++++.|+    ..|++++.+|..|+||||
T Consensus        37 t~L~~A~~~~~~~ivk~Ll~~g~~~~~-~~~~~~t~L~~~~~~~a~~~~~~~iv~~Ll----~~ga~i~~~d~~g~tpL~  111 (480)
T PHA03100         37 LPLYLAKEARNIDVVKILLDNGADINS-STKNNSTPLHYLSNIKYNLTDVKEIVKLLL----EYGANVNAPDNNGITPLL  111 (480)
T ss_pred             hhhhhhhccCCHHHHHHHHHcCCCCCC-ccccCcCHHHHHHHHHHHhhchHHHHHHHH----HCCCCCCCCCCCCCchhh
Confidence            566666666666666666666666543 45566666666     66666666666666    345556666666666666


Q ss_pred             HHH--hcCCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhcCCchHHHHHHHHHH
Q 019816           77 VLA--AVCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPELEKEIKELAKA  135 (335)
Q Consensus        77 ~Aa--~~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~  135 (335)
                      +|+  ..|+.++ ++|        ...|++++.+|..|.||+|+|+..+.. ..++++.|.+
T Consensus       112 ~A~~~~~~~~~iv~~L--------l~~g~~~~~~~~~g~t~L~~A~~~~~~-~~~iv~~Ll~  164 (480)
T PHA03100        112 YAISKKSNSYSIVEYL--------LDNGANVNIKNSDGENLLHLYLESNKI-DLKILKLLID  164 (480)
T ss_pred             HHHhcccChHHHHHHH--------HHcCCCCCccCCCCCcHHHHHHHcCCC-hHHHHHHHHH
Confidence            666  5566555 555        555666666666666666666655420 1244444444

>PHA02989 ankyrin repeat protein; Provisional

Probab=99.63  E-value=1e-15  Score=149.44  Aligned_cols=141  Identities=16%  Similarity=0.112  Sum_probs=82.8

Q ss_pred             CchHhHHHhc---CCHHHHHHHhhhCCCccccccCCCCchHHHHHhc--CCHhHHHHHHhcCCcccccccc-cCCCCCch
Q 019816            1 MTALHLAAGQ---GNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVS--FDKSDLKHLLNEYPVVKNLIFE-KDVKGNTP   74 (335)
Q Consensus         1 ~TpLH~Aa~~---G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~--g~~~~v~~Ll~~~~~~~~~~n~-~d~~G~Tp   74 (335)
                      +||||.|+..   |+.++++.|+++|++++..+|..|+||||+|+..  ++.++++.|+    +.|++++. .|..|.||
T Consensus       109 ~tpL~~a~~~~~~~~~eiv~~Ll~~Gadin~~~d~~g~tpLh~a~~~~~~~~~iv~~Ll----~~Gadi~~~~~~~g~tp  184 (494)
T PHA02989        109 VSPIVCFIYNSNINNCDMLRFLLSKGINVNDVKNSRGYNLLHMYLESFSVKKDVIKILL----SFGVNLFEKTSLYGLTP  184 (494)
T ss_pred             CcHHHHHHHhcccCcHHHHHHHHHCCCCcccccCCCCCCHHHHHHHhccCCHHHHHHHH----HcCCCccccccccCCCh
Confidence            4777766644   5677777777777777444677777777777643  4667777777    45666666 46667777


Q ss_pred             hHHHHhcC----CCCc-ccccccC----------cc--------------------cccccccccccccCCCCCHHHHHH
Q 019816           75 FHVLAAVC----PDPR-PYNAGYG----------II--------------------PYKIAKGYYQAVNKQNISVEHINR  119 (335)
Q Consensus        75 LH~Aa~~g----~~~~-~lL~~~~----------~~--------------------~~~~~~~~~~~~n~~G~Tpl~~a~  119 (335)
                      ||+|+..+    +.++ ++|...+          ..                    .++..+++++.+|..|+||||+|+
T Consensus       185 L~~a~~~~~~~~~~~iv~~Ll~~Ga~vn~~~~~~~t~l~~~~~~~~~~~~~~~~il~~l~~~advn~~d~~G~TpL~~Aa  264 (494)
T PHA02989        185 MNIYLRNDIDVISIKVIKYLIKKGVNIETNNNGSESVLESFLDNNKILSKKEFKVLNFILKYIKINKKDKKGFNPLLISA  264 (494)
T ss_pred             HHHHHhcccccccHHHHHHHHhCCCCccccCCccccHHHHHHHhchhhcccchHHHHHHHhCCCCCCCCCCCCCHHHHHH
Confidence            77665543    3333 2221000          00                    001234566777777777777777


Q ss_pred             hcCCchHHHHHHHHHHcC--------CCCCCcchhhh
Q 019816          120 YGFPELEKEIKELAKADG--------NGQYPDGVIKM  148 (335)
Q Consensus       120 ~~~~~~~~~i~~~l~~~~--------~~~~p~~~~~~  148 (335)
                      ..+..   ++++.|.+.|        .|.+|++.+..
T Consensus       265 ~~~~~---~~v~~LL~~Gadin~~d~~G~TpL~~A~~  298 (494)
T PHA02989        265 KVDNY---EAFNYLLKLGDDIYNVSKDGDTVLTYAIK  298 (494)
T ss_pred             HhcCH---HHHHHHHHcCCCccccCCCCCCHHHHHHH
Confidence            65532   5555555533        34456665443

>PHA02876 ankyrin repeat protein; Provisional

Probab=99.62  E-value=1.7e-15  Score=153.49  Aligned_cols=81  Identities=22%  Similarity=0.121  Sum_probs=42.3

Q ss_pred             CchHhHHHhcC-CHHHHHHHhhhCCCccccccCCCCchHHHHHhcC-CHhHHHHHHhcCCcccccccccCCCCCchhHHH
Q 019816            1 MTALHLAAGQG-NDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSF-DKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVL   78 (335)
Q Consensus         1 ~TpLH~Aa~~G-~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g-~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~A   78 (335)
                      +||||+|+..| +.+.++.|+..+++++. +|..|+||||+|+..+ +.++++.|+    ..|+++|.+|..|+||||+|
T Consensus       308 ~TpLh~Aa~~g~~~~~v~~Ll~~gadin~-~d~~g~TpLh~A~~~~~~~~iv~lLl----~~gadin~~d~~G~TpLh~A  382 (682)
T PHA02876        308 ETPLYLMAKNGYDTENIRTLIMLGADVNA-ADRLYITPLHQASTLDRNKDIVITLL----ELGANVNARDYCDKTPIHYA  382 (682)
T ss_pred             CCHHHHHHHhCCCHHHHHHHHHcCCCCCC-cccCCCcHHHHHHHhCCcHHHHHHHH----HcCCCCccCCCCCCCHHHHH
Confidence            35666666655 35555555555555533 4555555555555432 344444444    34455555555555555555


Q ss_pred             HhcCCCCc
Q 019816           79 AAVCPDPR   86 (335)
Q Consensus        79 a~~g~~~~   86 (335)
                      +..|+.++
T Consensus       383 a~~~~~~i  390 (682)
T PHA02876        383 AVRNNVVI  390 (682)
T ss_pred             HHcCCHHH
Confidence            55555444

>KOG0508 consensus Ankyrin repeat protein [General function prediction only]

Probab=99.61  E-value=6.3e-16  Score=141.34  Aligned_cols=131  Identities=15%  Similarity=0.012  Sum_probs=114.4

Q ss_pred             chHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHhc
Q 019816            2 TALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAAV   81 (335)
Q Consensus         2 TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~~   81 (335)
                      +||-.|+..||+++|+.|++++++++. ...-..|||--||.-|+.+++++|+    +.+++++..|+.|+|.||+||.+
T Consensus        86 ppLWaAsaAGHl~vVk~L~~~ga~VN~-tT~TNStPLraACfDG~leivKyLv----E~gad~~IanrhGhTcLmIa~yk  160 (615)
T KOG0508|consen   86 PPLWAASAAGHLEVVKLLLRRGASVND-TTRTNSTPLRAACFDGHLEIVKYLV----EHGADPEIANRHGHTCLMIACYK  160 (615)
T ss_pred             chhhHHhccCcHHHHHHHHHhcCcccc-ccccCCccHHHHHhcchhHHHHHHH----HcCCCCcccccCCCeeEEeeecc
Confidence            578888899999999999999998876 5566779999999999999999999    58999999999999999999999


Q ss_pred             CCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhcCCchHHHHHHHHHHc-------CCCCCCcchhhh
Q 019816           82 CPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPELEKEIKELAKAD-------GNGQYPDGVIKM  148 (335)
Q Consensus        82 g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~~-------~~~~~p~~~~~~  148 (335)
                      |+.++ ++|        ++.|+|+|.++..|+|+||.+.+.|+   -+|++.|..+       +-|.+|+.-+..
T Consensus       161 Gh~~I~qyL--------le~gADvn~ks~kGNTALH~caEsG~---vdivq~Ll~~ga~i~~d~~GmtPL~~Aa~  224 (615)
T KOG0508|consen  161 GHVDIAQYL--------LEQGADVNAKSYKGNTALHDCAESGS---VDIVQLLLKHGAKIDVDGHGMTPLLLAAV  224 (615)
T ss_pred             CchHHHHHH--------HHhCCCcchhcccCchHHHhhhhccc---HHHHHHHHhCCceeeecCCCCchHHHHhh
Confidence            99999 999        89999999999999999999998874   3777777663       345567754443

>KOG0514 consensus Ankyrin repeat protein [General function prediction only]

Probab=99.61  E-value=6.9e-16  Score=136.97  Aligned_cols=113  Identities=16%  Similarity=0.032  Sum_probs=96.7

Q ss_pred             CchHhHHHhcCCHHHHHHHhhhCCCc--------------------------------------cccccCCCCchHHHHH
Q 019816            1 MTALHLAAGQGNDWIVQEIIQRCPEC--------------------------------------CELVDDRGWNVLHFAM   42 (335)
Q Consensus         1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~--------------------------------------~~~~d~~G~t~Lh~A~   42 (335)
                      +|+||+|+.++++++|+.||+.+-.-                                      +......|+|+|++|+
T Consensus       269 NTALHYsVSHaNF~VV~~LLDSgvC~VD~qNrAGYtpiMLaALA~lk~~~d~~vV~~LF~mgnVNaKAsQ~gQTALMLAV  348 (452)
T KOG0514|consen  269 NTALHYAVSHANFDVVSILLDSGVCDVDQQNRAGYTPVMLAALAKLKQPADRTVVERLFKMGDVNAKASQHGQTALMLAV  348 (452)
T ss_pred             CeeeeeeecccchHHHHHHhccCcccccccccccccHHHHHHHHhhcchhhHHHHHHHHhccCcchhhhhhcchhhhhhh
Confidence            58999999999999999999865322                                      2222334788899999


Q ss_pred             hcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHhcCCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhc
Q 019816           43 VSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAAVCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYG  121 (335)
Q Consensus        43 ~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~  121 (335)
                      .+|+.++++.|+    ..|+++|.+|.+|.|+|+.|+.+||.++ ++|       +...++|..+.|.+|-|+|.+|.+.
T Consensus       349 SHGr~d~vk~LL----acgAdVNiQDdDGSTALMCA~EHGhkEivklL-------LA~p~cd~sLtD~DgSTAl~IAlea  417 (452)
T KOG0514|consen  349 SHGRVDMVKALL----ACGADVNIQDDDGSTALMCAAEHGHKEIVKLL-------LAVPSCDISLTDVDGSTALSIALEA  417 (452)
T ss_pred             hcCcHHHHHHHH----HccCCCccccCCccHHHhhhhhhChHHHHHHH-------hccCcccceeecCCCchhhhhHHhc
Confidence            999999999999    7899999999999999999999999999 554       1678999999999999999999988


Q ss_pred             CCc
Q 019816          122 FPE  124 (335)
Q Consensus       122 ~~~  124 (335)
                      ++.
T Consensus       418 gh~  420 (452)
T KOG0514|consen  418 GHR  420 (452)
T ss_pred             Cch
Confidence            854

>PHA02743 Viral ankyrin protein; Provisional

Probab=99.60  E-value=1.2e-15  Score=127.21  Aligned_cols=100  Identities=9%  Similarity=0.039  Sum_probs=88.9

Q ss_pred             CchHhHHHhcCCHHH---HHHHhhhCCCcccccc-CCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhH
Q 019816            1 MTALHLAAGQGNDWI---VQEIIQRCPECCELVD-DRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFH   76 (335)
Q Consensus         1 ~TpLH~Aa~~G~~e~---v~~Ll~~~~~~~~~~d-~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH   76 (335)
                      +||||+|+..|+.+.   +++|++.+++++. +| ..|+||||+|+..++.+++++|+.   ..+.+++.+|.+|+||||
T Consensus        58 ~t~Lh~Aa~~g~~~~~~~i~~Ll~~Gadin~-~d~~~g~TpLh~A~~~g~~~iv~~Ll~---~~gad~~~~d~~g~tpL~  133 (166)
T PHA02743         58 RQCTHMVAWYDRANAVMKIELLVNMGADINA-RELGTGNTLLHIAASTKNYELAEWLCR---QLGVNLGAINYQHETAYH  133 (166)
T ss_pred             CcHHHHHHHhCccCHHHHHHHHHHcCCCCCC-CCCCCCCcHHHHHHHhCCHHHHHHHHh---ccCCCccCcCCCCCCHHH
Confidence            599999999998654   7899999999866 66 589999999999999999999982   257899999999999999


Q ss_pred             HHHhcCCCCc-ccccccCcccccccccccccccCCCC
Q 019816           77 VLAAVCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNI  112 (335)
Q Consensus        77 ~Aa~~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~  112 (335)
                      +|+..++.++ ++|        +..+++++.++..|.
T Consensus       134 ~A~~~~~~~iv~~L--------l~~ga~~~~~~~~~~  162 (166)
T PHA02743        134 IAYKMRDRRMMEIL--------RANGAVCDDPLSIGL  162 (166)
T ss_pred             HHHHcCCHHHHHHH--------HHcCCCCCCcccCCc
Confidence            9999999888 888        888999999988775

>PHA02798 ankyrin-like protein; Provisional

Probab=99.60  E-value=2.6e-15  Score=146.33  Aligned_cols=139  Identities=15%  Similarity=0.022  Sum_probs=93.9

Q ss_pred             CchHhHHHhcC---CHHHHHHHhhhCCCccccccCCCCchHHHHHhcCC---HhHHHHHHhcCCcccccccccC-CCCCc
Q 019816            1 MTALHLAAGQG---NDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFD---KSDLKHLLNEYPVVKNLIFEKD-VKGNT   73 (335)
Q Consensus         1 ~TpLH~Aa~~G---~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~---~~~v~~Ll~~~~~~~~~~n~~d-~~G~T   73 (335)
                      +||||+|+..|   +.++++.|+++|++++. +|.+|+||||+|+..++   .++++.|+    ..|+++|.+| ..|.|
T Consensus       110 ~TpLh~a~~~~~~~~~~iv~~Ll~~Gadvn~-~d~~g~tpL~~a~~~~~~~~~~vv~~Ll----~~gadin~~~~~~~~t  184 (489)
T PHA02798        110 ETPLYCLLSNGYINNLEILLFMIENGADTTL-LDKDGFTMLQVYLQSNHHIDIEIIKLLL----EKGVDINTHNNKEKYD  184 (489)
T ss_pred             CcHHHHHHHcCCcChHHHHHHHHHcCCCccc-cCCCCCcHHHHHHHcCCcchHHHHHHHH----HhCCCcccccCcCCCc
Confidence            58999999876   78999999999999865 79999999999999887   88999998    4677777764 45777


Q ss_pred             hhHHHHhcC----CCCc-ccccccCc-------------------------------ccccccccccccccCCCCCHHHH
Q 019816           74 PFHVLAAVC----PDPR-PYNAGYGI-------------------------------IPYKIAKGYYQAVNKQNISVEHI  117 (335)
Q Consensus        74 pLH~Aa~~g----~~~~-~lL~~~~~-------------------------------~~~~~~~~~~~~~n~~G~Tpl~~  117 (335)
                      |||.++..+    +.++ ++|...+.                               ..++..++|+|.+|..|+||||+
T Consensus       185 ~Lh~~~~~~~~~~~~~ivk~Li~~Ga~i~~~~~~~~~~~~~~l~~l~~~~~~~~~~i~~~l~~~~dvN~~d~~G~TPL~~  264 (489)
T PHA02798        185 TLHCYFKYNIDRIDADILKLFVDNGFIINKENKSHKKKFMEYLNSLLYDNKRFKKNILDFIFSYIDINQVDELGFNPLYY  264 (489)
T ss_pred             HHHHHHHhccccCCHHHHHHHHHCCCCcccCCccccchHHHHHHHHHhhcccchHHHHHHHHhcCCCCCcCcCCccHHHH
Confidence            887776543    2222 22210000                               00012246777788888888888


Q ss_pred             HHhcCCchHHHHHHHHHHcC--------CCCCCcchhh
Q 019816          118 NRYGFPELEKEIKELAKADG--------NGQYPDGVIK  147 (335)
Q Consensus       118 a~~~~~~~~~~i~~~l~~~~--------~~~~p~~~~~  147 (335)
                      |+..+..   ++++.|.+.|        .|.+|++...
T Consensus       265 A~~~~~~---~~v~~LL~~GAdin~~d~~G~TpL~~A~  299 (489)
T PHA02798        265 SVSHNNR---KIFEYLLQLGGDINIITELGNTCLFTAF  299 (489)
T ss_pred             HHHcCcH---HHHHHHHHcCCcccccCCCCCcHHHHHH
Confidence            8766533   5666666533        3456666544

>KOG0510 consensus Ankyrin repeat protein [General function prediction only]

Probab=99.59  E-value=2.5e-15  Score=145.35  Aligned_cols=120  Identities=18%  Similarity=0.171  Sum_probs=101.2

Q ss_pred             CchHhHHHhcCCHHHHHHHhhhCCCcc--------------ccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccc
Q 019816            1 MTALHLAAGQGNDWIVQEIIQRCPECC--------------ELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFE   66 (335)
Q Consensus         1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~--------------~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~   66 (335)
                      .||||.|+..|++++++.+|+.+....              ...|.+|.||||+|++.|+.+.++.|+    ..|++++.
T Consensus       226 ~~pLhlAve~g~~e~lk~~L~n~~~~a~~~~~~~~q~kelv~~~d~dg~tpLH~a~r~G~~~svd~Ll----~~Ga~I~~  301 (929)
T KOG0510|consen  226 ATPLHLAVEGGDIEMLKMCLQNGKKIADVQLDAMQQEKELVNDEDNDGCTPLHYAARQGGPESVDNLL----GFGASINS  301 (929)
T ss_pred             CcchhhhhhcCCHHHHHHHHhCccccchhhhHHHHHHHHHhhcccccCCchHHHHHHcCChhHHHHHH----HcCCcccc
Confidence            489999999999999999999865432              235889999999999999999999999    68999999


Q ss_pred             cCCCCCchhHHHHhcCCCCc--ccccccCccccc-ccccccccccCCCCCHHHHHHhcCCchHHHHHHHHHH
Q 019816           67 KDVKGNTPFHVLAAVCPDPR--PYNAGYGIIPYK-IAKGYYQAVNKQNISVEHINRYGFPELEKEIKELAKA  135 (335)
Q Consensus        67 ~d~~G~TpLH~Aa~~g~~~~--~lL~~~~~~~~~-~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~  135 (335)
                      +++++.||||.||..|+..+  ++|        . ......+..|-.|.||||+|++.+++   .+++.|..
T Consensus       302 kn~d~~spLH~AA~yg~~ntv~rLL--------~~~~~rllne~D~~g~tpLHlaa~~gH~---~v~qlLl~  362 (929)
T KOG0510|consen  302 KNKDEESPLHFAAIYGRINTVERLL--------QESDTRLLNESDLHGMTPLHLAAKSGHD---RVVQLLLN  362 (929)
T ss_pred             cCCCCCCchHHHHHcccHHHHHHHH--------hCcCccccccccccCCCchhhhhhcCHH---HHHHHHHh
Confidence            99999999999999999998  666        4 23345678889999999999977754   55555554

>PHA02798 ankyrin-like protein; Provisional

Probab=99.59  E-value=3.3e-15  Score=145.64  Aligned_cols=123  Identities=15%  Similarity=0.058  Sum_probs=93.2

Q ss_pred             chHhHH--HhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhc-----CCHhHHHHHHhcCCcccccccccCCCCCch
Q 019816            2 TALHLA--AGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVS-----FDKSDLKHLLNEYPVVKNLIFEKDVKGNTP   74 (335)
Q Consensus         2 TpLH~A--a~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~-----g~~~~v~~Ll~~~~~~~~~~n~~d~~G~Tp   74 (335)
                      |+++.+  ...++.++++.|+++|++++. +|..|.||||.|+.+     ++.++++.|+    ..|+++|.+|.+|+||
T Consensus        38 ~~~~~yl~~~~~~~~iv~~Ll~~Gadvn~-~d~~g~TpL~~~~~n~~~~~~~~~iv~~Ll----~~GadiN~~d~~G~Tp  112 (489)
T PHA02798         38 SIFQKYLQRDSPSTDIVKLFINLGANVNG-LDNEYSTPLCTILSNIKDYKHMLDIVKILI----ENGADINKKNSDGETP  112 (489)
T ss_pred             hHHHHHHhCCCCCHHHHHHHHHCCCCCCC-CCCCCCChHHHHHHhHHhHHhHHHHHHHHH----HCCCCCCCCCCCcCcH
Confidence            444433  334578888888888888865 688888888888764     5678888888    5788888888888888


Q ss_pred             hHHHHhcCC---CCc-ccccccCcccccccccccccccCCCCCHHHHHHhcCCchHHHHHHHHHHcC
Q 019816           75 FHVLAAVCP---DPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPELEKEIKELAKADG  137 (335)
Q Consensus        75 LH~Aa~~g~---~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~~~  137 (335)
                      ||+|+..+.   .++ ++|        ...|++++.+|.+|.||||+|++.+.....++++.|.+.|
T Consensus       113 Lh~a~~~~~~~~~~iv~~L--------l~~Gadvn~~d~~g~tpL~~a~~~~~~~~~~vv~~Ll~~g  171 (489)
T PHA02798        113 LYCLLSNGYINNLEILLFM--------IENGADTTLLDKDGFTMLQVYLQSNHHIDIEIIKLLLEKG  171 (489)
T ss_pred             HHHHHHcCCcChHHHHHHH--------HHcCCCccccCCCCCcHHHHHHHcCCcchHHHHHHHHHhC
Confidence            888888764   344 667        7788888888888888888888776544457777777654

>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]

Probab=99.58  E-value=2e-13  Score=132.84  Aligned_cols=111  Identities=19%  Similarity=0.106  Sum_probs=96.3

Q ss_pred             CchHhHHHhcCCHHHHHHHhhhCCCcccc-------ccC---------------CCCchHHHHHhcCCHhHHHHHHhcCC
Q 019816            1 MTALHLAAGQGNDWIVQEIIQRCPECCEL-------VDD---------------RGWNVLHFAMVSFDKSDLKHLLNEYP   58 (335)
Q Consensus         1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~-------~d~---------------~G~t~Lh~A~~~g~~~~v~~Ll~~~~   58 (335)
                      .||||+|..+.+.++|+.|++.++|+...       .|.               -|+.||-+||.-++++++++|+    
T Consensus       185 qSaLHiAIv~~~~~~V~lLl~~gADV~aRa~G~FF~~~dqk~~rk~T~Y~G~~YfGEyPLSfAAC~nq~eivrlLl----  260 (782)
T KOG3676|consen  185 QSALHIAIVNRDAELVRLLLAAGADVHARACGAFFCPDDQKASRKSTNYTGYFYFGEYPLSFAACTNQPEIVRLLL----  260 (782)
T ss_pred             cchHHHHHHhccHHHHHHHHHcCCchhhHhhccccCcccccccccccCCcceeeeccCchHHHHHcCCHHHHHHHH----
Confidence            58999999999999999999999987432       111               2789999999999999999999    


Q ss_pred             cccccccccCCCCCchhHHHHhcCCCCc-ccccccCcccccccccc--cccccCCCCCHHHHHHhcCC
Q 019816           59 VVKNLIFEKDVKGNTPFHVLAAVCPDPR-PYNAGYGIIPYKIAKGY--YQAVNKQNISVEHINRYGFP  123 (335)
Q Consensus        59 ~~~~~~n~~d~~G~TpLH~Aa~~g~~~~-~lL~~~~~~~~~~~~~~--~~~~n~~G~Tpl~~a~~~~~  123 (335)
                      ..++++|++|.+|||.||..+.+-..++ .++        +..+++  ...+|++|.|||.+|++.++
T Consensus       261 ~~gAd~~aqDS~GNTVLH~lVi~~~~~My~~~--------L~~ga~~l~~v~N~qgLTPLtLAaklGk  320 (782)
T KOG3676|consen  261 AHGADPNAQDSNGNTVLHMLVIHFVTEMYDLA--------LELGANALEHVRNNQGLTPLTLAAKLGK  320 (782)
T ss_pred             hcCCCCCccccCCChHHHHHHHHHHHHHHHHH--------HhcCCCccccccccCCCChHHHHHHhhh
Confidence            5899999999999999999999855555 666        667777  88999999999999998874

>PLN03192 Voltage-dependent potassium channel; Provisional

Probab=99.57  E-value=4.1e-15  Score=153.21  Aligned_cols=110  Identities=17%  Similarity=0.106  Sum_probs=97.0

Q ss_pred             CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhc------------------------
Q 019816            1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNE------------------------   56 (335)
Q Consensus         1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~------------------------   56 (335)
                      +||||+||.+|+.++++.|++++++++. +|.+|+||||+|+..|+.++++.|++.                        
T Consensus       559 ~TpLh~Aa~~g~~~~v~~Ll~~gadin~-~d~~G~TpL~~A~~~g~~~iv~~L~~~~~~~~~~~~~~~L~~Aa~~g~~~~  637 (823)
T PLN03192        559 RTPLHIAASKGYEDCVLVLLKHACNVHI-RDANGNTALWNAISAKHHKIFRILYHFASISDPHAAGDLLCTAAKRNDLTA  637 (823)
T ss_pred             CCHHHHHHHcChHHHHHHHHhcCCCCCC-cCCCCCCHHHHHHHhCCHHHHHHHHhcCcccCcccCchHHHHHHHhCCHHH
Confidence            5999999999999999999999999855 799999999988888887777766421                        


Q ss_pred             ---CCcccccccccCCCCCchhHHHHhcCCCCc-ccccccCcccccccccccccccCCC-CCHHHHHH
Q 019816           57 ---YPVVKNLIFEKDVKGNTPFHVLAAVCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQN-ISVEHINR  119 (335)
Q Consensus        57 ---~~~~~~~~n~~d~~G~TpLH~Aa~~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G-~Tpl~~a~  119 (335)
                         +...|+++|.+|.+|+||||+|+..|+.++ ++|        +..|++++..|.+| .||.+++.
T Consensus       638 v~~Ll~~Gadin~~d~~G~TpLh~A~~~g~~~iv~~L--------l~~GAdv~~~~~~g~~t~~~l~~  697 (823)
T PLN03192        638 MKELLKQGLNVDSEDHQGATALQVAMAEDHVDMVRLL--------IMNGADVDKANTDDDFSPTELRE  697 (823)
T ss_pred             HHHHHHCCCCCCCCCCCCCCHHHHHHHCCcHHHHHHH--------HHcCCCCCCCCCCCCCCHHHHHH
Confidence               114678999999999999999999999999 888        89999999999998 99999886

>PHA02795 ankyrin-like protein; Provisional

Probab=99.56  E-value=8.6e-15  Score=137.38  Aligned_cols=129  Identities=9%  Similarity=-0.118  Sum_probs=106.5

Q ss_pred             CchHhHHHh--cCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCccccc-cccc-----CCCCC
Q 019816            1 MTALHLAAG--QGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNL-IFEK-----DVKGN   72 (335)
Q Consensus         1 ~TpLH~Aa~--~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~-~n~~-----d~~G~   72 (335)
                      +|+||.|+.  .|+.+++++|+++|+++..   .++.||||.|+.+++.+++++|+    ..|+. .+..     +..|.
T Consensus       117 ~~~L~~~~~n~~n~~eiV~~LI~~GADIn~---~~~~t~lh~A~~~~~~eIVk~Ll----s~Ga~~~n~~~~~l~~~~~~  189 (437)
T PHA02795        117 QDLLLYYLSNAYVEIDIVDFMVDHGAVIYK---IECLNAYFRGICKKESSVVEFIL----NCGIPDENDVKLDLYKIIQY  189 (437)
T ss_pred             cHHHHHHHHhcCCCHHHHHHHHHCCCCCCC---CCCCCHHHHHHHcCcHHHHHHHH----hcCCcccccccchhhhhhcc
Confidence            589999999  8999999999999999955   35589999999999999999999    45542 2222     24588


Q ss_pred             chhHHHHhcCCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhcCCchHHHHHHHHHHcCC--------CCCCc
Q 019816           73 TPFHVLAAVCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPELEKEIKELAKADGN--------GQYPD  143 (335)
Q Consensus        73 TpLH~Aa~~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~~~~--------~~~p~  143 (335)
                      |++|.|+..++.++ ++|        ...|++++.+|..|.||||+|+..+..   ++++.|.+.|+        |.+|+
T Consensus       190 t~l~~a~~~~~~eIve~L--------Is~GADIN~kD~~G~TpLh~Aa~~g~~---eiVelLL~~GAdIN~~d~~G~TpL  258 (437)
T PHA02795        190 TRGFLVDEPTVLEIYKLC--------IPYIEDINQLDAGGRTLLYRAIYAGYI---DLVSWLLENGANVNAVMSNGYTCL  258 (437)
T ss_pred             chhHHHHhcCHHHHHHHH--------HhCcCCcCcCCCCCCCHHHHHHHcCCH---HHHHHHHHCCCCCCCcCCCCCCHH
Confidence            99999999999888 888        889999999999999999999988744   78888877554        34566


Q ss_pred             chhh
Q 019816          144 GVIK  147 (335)
Q Consensus       144 ~~~~  147 (335)
                      +.+.
T Consensus       259 h~Aa  262 (437)
T PHA02795        259 DVAV  262 (437)
T ss_pred             HHHH
Confidence            5543

>PHA02730 ankyrin-like protein; Provisional

Probab=99.56  E-value=9.8e-15  Score=143.27  Aligned_cols=125  Identities=11%  Similarity=-0.086  Sum_probs=96.2

Q ss_pred             CchHhHHHhcCC----HHHHHHHhhhCCC--ccccccCCCCchHHH---HHhcC---------CHhHHHHHHhcCCcccc
Q 019816            1 MTALHLAAGQGN----DWIVQEIIQRCPE--CCELVDDRGWNVLHF---AMVSF---------DKSDLKHLLNEYPVVKN   62 (335)
Q Consensus         1 ~TpLH~Aa~~G~----~e~v~~Ll~~~~~--~~~~~d~~G~t~Lh~---A~~~g---------~~~~v~~Ll~~~~~~~~   62 (335)
                      +||||+|+..++    .++++.|+++|++  + ..+|.+|+||||.   |...+         ..+++++|+    ..|+
T Consensus       379 ~TpLH~Aa~~nnn~i~~eIvelLIs~Ga~~dI-N~kd~~G~T~Lh~~i~a~~~n~~~~~~e~~~~~ivk~LI----s~GA  453 (672)
T PHA02730        379 NYPLHDYFVNNNNIVDVNVVRFIVENNGHMAI-NHVSNNGRLCMYGLILSRFNNCGYHCYETILIDVFDILS----KYMD  453 (672)
T ss_pred             CcHHHHHHHHcCCcchHHHHHHHHHcCCCccc-cccccCCCchHhHHHHHHhccccccccchhHHHHHHHHH----hccc
Confidence            589999888875    7999999998873  4 4468889999984   33332         124578888    6788


Q ss_pred             cccccCCCCCchhHHHHhcCCCCc-ccccccCcccccccccccccccC-CCCCHHHHHHhcCCchHHHHHHHHHHcCCC
Q 019816           63 LIFEKDVKGNTPFHVLAAVCPDPR-PYNAGYGIIPYKIAKGYYQAVNK-QNISVEHINRYGFPELEKEIKELAKADGNG  139 (335)
Q Consensus        63 ~~n~~d~~G~TpLH~Aa~~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~-~G~Tpl~~a~~~~~~~~~~i~~~l~~~~~~  139 (335)
                      ++|.+|..|+||||+|+..++.++ ++|        +..|++++.+|+ .|.||+|.|+..... ..++++.|.+.++.
T Consensus       454 DINakD~~G~TPLh~Aa~~~~~eive~L--------I~~GAdIN~~d~~~g~TaL~~Aa~~~~~-~~eIv~~LLs~ga~  523 (672)
T PHA02730        454 DIDMIDNENKTLLYYAVDVNNIQFARRL--------LEYGASVNTTSRSIINTAIQKSSYRREN-KTKLVDLLLSYHPT  523 (672)
T ss_pred             chhccCCCCCCHHHHHHHhCCHHHHHHH--------HHCCCCCCCCCCcCCcCHHHHHHHhhcC-cHHHHHHHHHcCCC
Confidence            999999999999999999888887 888        788999999997 589999998853211 35777877776654

>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]

Probab=99.55  E-value=5.1e-15  Score=150.89  Aligned_cols=109  Identities=22%  Similarity=0.135  Sum_probs=89.4

Q ss_pred             chHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHhc
Q 019816            2 TALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAAV   81 (335)
Q Consensus         2 TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~~   81 (335)
                      |+||.|+..++..+++.++.++.++.. ++.+|.||||.||.+|+.++|++|+    +.|++++.+|+.|+||||.||..
T Consensus       509 ~~lhla~~~~~v~~~~~l~~~ga~v~~-~~~r~~TpLh~A~~~g~v~~VkfLL----e~gAdv~ak~~~G~TPLH~Aa~~  583 (1143)
T KOG4177|consen  509 TPLHLAADEDTVKVAKILLEHGANVDL-RTGRGYTPLHVAVHYGNVDLVKFLL----EHGADVNAKDKLGYTPLHQAAQQ  583 (1143)
T ss_pred             chhhhhhhhhhHHHHHHHhhcCCceeh-hcccccchHHHHHhcCCchHHHHhh----hCCccccccCCCCCChhhHHHHc
Confidence            455555555555566666666666644 6788899999999999999999999    67899999999999999999999


Q ss_pred             CCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhcCC
Q 019816           82 CPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFP  123 (335)
Q Consensus        82 g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~  123 (335)
                      |+.++ .+|        .+.|+++|..|.+|.|||++|...+.
T Consensus       584 G~~~i~~LL--------lk~GA~vna~d~~g~TpL~iA~~lg~  618 (1143)
T KOG4177|consen  584 GHNDIAELL--------LKHGASVNAADLDGFTPLHIAVRLGY  618 (1143)
T ss_pred             ChHHHHHHH--------HHcCCCCCcccccCcchhHHHHHhcc
Confidence            98888 888        88999999999999999999997664

>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]

Probab=99.55  E-value=9.5e-16  Score=132.29  Aligned_cols=125  Identities=21%  Similarity=0.179  Sum_probs=99.5

Q ss_pred             HhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHhcCCCCc-
Q 019816            8 AGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAAVCPDPR-   86 (335)
Q Consensus         8 a~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~~g~~~~-   86 (335)
                      |+.|+.--|+.-|+......+.-|..|.+||||||+.|+..+++.|+    ..|+.+|..+....||||+|+.+|+.++ 
T Consensus         8 cregna~qvrlwld~tehdln~gddhgfsplhwaakegh~aivemll----~rgarvn~tnmgddtplhlaaahghrdiv   83 (448)
T KOG0195|consen    8 CREGNAFQVRLWLDDTEHDLNVGDDHGFSPLHWAAKEGHVAIVEMLL----SRGARVNSTNMGDDTPLHLAAAHGHRDIV   83 (448)
T ss_pred             hhcCCeEEEEEEecCcccccccccccCcchhhhhhhcccHHHHHHHH----hcccccccccCCCCcchhhhhhcccHHHH
Confidence            44455444444444433334557999999999999999999999999    6899999999999999999999999999 


Q ss_pred             ccccccCcccccccccccccccCCCCCHHHHHHhcCCchHHHHHHHHHH--------cCCCCCCcchhh
Q 019816           87 PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPELEKEIKELAKA--------DGNGQYPDGVIK  147 (335)
Q Consensus        87 ~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~--------~~~~~~p~~~~~  147 (335)
                      +.|        +.+.+|+|+.|..|.||||+||-+|.+   .|.+-|..        ++.|.+|+...+
T Consensus        84 qkl--------l~~kadvnavnehgntplhyacfwgyd---qiaedli~~ga~v~icnk~g~tpldkak  141 (448)
T KOG0195|consen   84 QKL--------LSRKADVNAVNEHGNTPLHYACFWGYD---QIAEDLISCGAAVNICNKKGMTPLDKAK  141 (448)
T ss_pred             HHH--------HHHhcccchhhccCCCchhhhhhhcHH---HHHHHHHhccceeeecccCCCCchhhhc
Confidence            666        788999999999999999999999866   44454444        455677876544

>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

Probab=99.54  E-value=3.5e-14  Score=111.19  Aligned_cols=109  Identities=24%  Similarity=0.185  Sum_probs=98.6

Q ss_pred             CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHh
Q 019816            1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAA   80 (335)
Q Consensus         1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~   80 (335)
                      +||||.|++.|+.++++.|++.+++.. ..|..|.+|+|+|+..++.++++.|+    ..+..++..|..|.||+|+|+.
T Consensus         8 ~t~l~~a~~~~~~~~i~~li~~~~~~~-~~~~~g~~~l~~a~~~~~~~~~~~ll----~~~~~~~~~~~~~~~~l~~a~~   82 (126)
T cd00204           8 RTPLHLAASNGHLEVVKLLLENGADVN-AKDNDGRTPLHLAAKNGHLEIVKLLL----EKGADVNARDKDGNTPLHLAAR   82 (126)
T ss_pred             CCHHHHHHHcCcHHHHHHHHHcCCCCC-ccCCCCCcHHHHHHHcCCHHHHHHHH----HcCCCccccCCCCCCHHHHHHH
Confidence            589999999999999999999998874 47899999999999999999999999    4566788889999999999999


Q ss_pred             cCCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhcC
Q 019816           81 VCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGF  122 (335)
Q Consensus        81 ~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~  122 (335)
                      .++.++ ++|        ...+.+.+..|..|.||+++|....
T Consensus        83 ~~~~~~~~~L--------~~~~~~~~~~~~~~~~~l~~~~~~~  117 (126)
T cd00204          83 NGNLDVVKLL--------LKHGADVNARDKDGRTPLHLAAKNG  117 (126)
T ss_pred             cCcHHHHHHH--------HHcCCCCcccCCCCCCHHHHHHhcC
Confidence            999888 888        7778889999999999999999764

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.

>PHA02989 ankyrin repeat protein; Provisional

Probab=99.54  E-value=2.8e-14  Score=139.23  Aligned_cols=122  Identities=16%  Similarity=0.019  Sum_probs=85.8

Q ss_pred             CchHhHHHhc--CCHHHHHHHhhhCCCccccccCCCCchHHHHHhcC------CHhHHHHHHhcCCcccccccccCCCCC
Q 019816            1 MTALHLAAGQ--GNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSF------DKSDLKHLLNEYPVVKNLIFEKDVKGN   72 (335)
Q Consensus         1 ~TpLH~Aa~~--G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g------~~~~v~~Ll~~~~~~~~~~n~~d~~G~   72 (335)
                      +||||.++..  ++.++++.|+++|++++. ++ .+.||||.|+.++      +.++++.|+    ..|+++|.+|.+|.
T Consensus        36 ~t~l~~~~~~~~~~~~iv~~Ll~~GAdvn~-~~-~~~tpL~~a~~~~~~~~~~~~~iv~~Ll----~~Gadin~~d~~g~  109 (494)
T PHA02989         36 NSILLLYLKRKDVKIKIVKLLIDNGADVNY-KG-YIETPLCAVLRNREITSNKIKKIVKLLL----KFGADINLKTFNGV  109 (494)
T ss_pred             CCHHHHHHhcCCCChHHHHHHHHcCCCccC-CC-CCCCcHHHHHhccCcchhhHHHHHHHHH----HCCCCCCCCCCCCC
Confidence            3677655443  367888888888888865 34 5688888877654      356788888    57888888888888


Q ss_pred             chhHHHHhcC---CCCc-ccccccCccccccccccc-ccccCCCCCHHHHHHhcCCchHHHHHHHHHHcC
Q 019816           73 TPFHVLAAVC---PDPR-PYNAGYGIIPYKIAKGYY-QAVNKQNISVEHINRYGFPELEKEIKELAKADG  137 (335)
Q Consensus        73 TpLH~Aa~~g---~~~~-~lL~~~~~~~~~~~~~~~-~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~~~  137 (335)
                      ||||.|+..+   +.++ ++|        ++.|+|+ +.+|..|+||||+|+..+.. ..++++.|.+.|
T Consensus       110 tpL~~a~~~~~~~~~eiv~~L--------l~~Gadin~~~d~~g~tpLh~a~~~~~~-~~~iv~~Ll~~G  170 (494)
T PHA02989        110 SPIVCFIYNSNINNCDMLRFL--------LSKGINVNDVKNSRGYNLLHMYLESFSV-KKDVIKILLSFG  170 (494)
T ss_pred             cHHHHHHHhcccCcHHHHHHH--------HHCCCCcccccCCCCCCHHHHHHHhccC-CHHHHHHHHHcC
Confidence            8888776653   4455 777        7788888 78888888888887654321 346666666644

>PHA02917 ankyrin-like protein; Provisional

Probab=99.53  E-value=1.7e-14  Score=144.07  Aligned_cols=120  Identities=7%  Similarity=-0.068  Sum_probs=97.9

Q ss_pred             chHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHH--HhcCCHhHHHHHHhcCCcccccccccCCC---C-----
Q 019816            2 TALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFA--MVSFDKSDLKHLLNEYPVVKNLIFEKDVK---G-----   71 (335)
Q Consensus         2 TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A--~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~---G-----   71 (335)
                      +++|.|+..|+.|++++|+++|++++. +|.+|+||||.|  +.+|+.+++++|+    ..|+++|.+|.+   |     
T Consensus       105 ~~~~~a~~~~~~e~vk~Ll~~Gadin~-~d~~g~T~L~~~~a~~~~~~eivklLi----~~Ga~vn~~d~~~~~g~~~~~  179 (661)
T PHA02917        105 IFSYMKSKNVDVDLIKVLVEHGFDLSV-KCENHRSVIENYVMTDDPVPEIIDLFI----ENGCSVLYEDEDDEYGYAYDD  179 (661)
T ss_pred             hHHHHHhhcCCHHHHHHHHHcCCCCCc-cCCCCccHHHHHHHccCCCHHHHHHHH----HcCCCcccccccccccccccc
Confidence            356778888899999999999999966 799999999965  3578999999999    578998876543   4     


Q ss_pred             ------CchhHHHHh-----------cCCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhcCCchHHHHHHHH
Q 019816           72 ------NTPFHVLAA-----------VCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPELEKEIKELA  133 (335)
Q Consensus        72 ------~TpLH~Aa~-----------~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l  133 (335)
                            .||||+|+.           .++.++ ++|        +..|+|++.+|.+|.||||+|+..+.. ..++++.|
T Consensus       180 ~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~eiv~~L--------i~~Gadvn~~d~~G~TpLh~A~~~g~~-~~eivk~L  250 (661)
T PHA02917        180 YQPRNCGTVLHLYIISHLYSESDTRAYVRPEVVKCL--------INHGIKPSSIDKNYCTALQYYIKSSHI-DIDIVKLL  250 (661)
T ss_pred             ccccccccHHHHHHhhcccccccccccCcHHHHHHH--------HHCCCCcccCCCCCCcHHHHHHHcCCC-cHHHHHHH
Confidence                  599999986           345566 888        889999999999999999999987753 23677766


Q ss_pred             HH
Q 019816          134 KA  135 (335)
Q Consensus       134 ~~  135 (335)
                      .+
T Consensus       251 i~  252 (661)
T PHA02917        251 MK  252 (661)
T ss_pred             Hh
Confidence            54

>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]

Probab=99.51  E-value=1.2e-14  Score=135.13  Aligned_cols=124  Identities=21%  Similarity=0.136  Sum_probs=108.0

Q ss_pred             chHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhc-------------------------
Q 019816            2 TALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNE-------------------------   56 (335)
Q Consensus         2 TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~-------------------------   56 (335)
                      |+||.+|...+.++|++|++.+++++. .|..||||||.|+..|+..++++|++.                         
T Consensus        75 Talhq~~id~~~e~v~~l~e~ga~Vn~-~d~e~wtPlhaaascg~~~i~~~li~~gA~~~avNsdg~~P~dl~e~ea~~~  153 (527)
T KOG0505|consen   75 TALHQACIDDNLEMVKFLVENGANVNA-QDNEGWTPLHAAASCGYLNIVEYLIQHGANLLAVNSDGNMPYDLAEDEATLD  153 (527)
T ss_pred             hhHHHHHhcccHHHHHHHHHhcCCccc-cccccCCcchhhcccccHHHHHHHHHhhhhhhhccCCCCCccccccCcchhH
Confidence            899999999999999999999999977 799999999999999999999999970                         


Q ss_pred             ------------------------------CCcccccccccCCCCCchhHHHHhcCCCCc-ccccccCcccccccccccc
Q 019816           57 ------------------------------YPVVKNLIFEKDVKGNTPFHVLAAVCPDPR-PYNAGYGIIPYKIAKGYYQ  105 (335)
Q Consensus        57 ------------------------------~~~~~~~~n~~d~~G~TpLH~Aa~~g~~~~-~lL~~~~~~~~~~~~~~~~  105 (335)
                                                    ....|...+..+..|-|.||.|+..|..+. .+|        +..+.+++
T Consensus       154 ~l~~~~~r~gi~iea~R~~~e~~ml~D~~q~l~~G~~~d~~~~rG~T~lHvAaa~Gy~e~~~lL--------l~ag~~~~  225 (527)
T KOG0505|consen  154 VLETEMARQGIDIEAARKAEEQTMLDDARQWLNAGAELDARHARGATALHVAAANGYTEVAALL--------LQAGYSVN  225 (527)
T ss_pred             HHHHHHHHhcccHHHHhhhhHHHHHHHHHHHHhccccccccccccchHHHHHHhhhHHHHHHHH--------HHhccCcc
Confidence                                          001456667777779999999999999999 888        89999999


Q ss_pred             cccCCCCCHHHHHHhcCCchHHHHHHHHHHcC
Q 019816          106 AVNKQNISVEHINRYGFPELEKEIKELAKADG  137 (335)
Q Consensus       106 ~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~~~  137 (335)
                      .+|.+|+||||.|+.|+.+   ++.++|.+++
T Consensus       226 ~~D~dgWtPlHAAA~Wg~~---~~~elL~~~g  254 (527)
T KOG0505|consen  226 IKDYDGWTPLHAAAHWGQE---DACELLVEHG  254 (527)
T ss_pred             cccccCCCcccHHHHhhhH---hHHHHHHHhh
Confidence            9999999999999999855   5555666544

>PHA02884 ankyrin repeat protein; Provisional

Probab=99.51  E-value=7.1e-14  Score=126.17  Aligned_cols=102  Identities=14%  Similarity=0.026  Sum_probs=87.3

Q ss_pred             CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHh
Q 019816            1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAA   80 (335)
Q Consensus         1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~   80 (335)
                      .||||+|+..|+.++++.|+++|++++...+..|.||||+|+..++.++++.|+    ..|++++.+|.+|.||||+|+.
T Consensus        71 ~TpLh~Aa~~~~~eivklLL~~GADVN~~~~~~g~TpLh~Aa~~~~~eivklLL----~~GAdin~kd~~G~TpL~~A~~  146 (300)
T PHA02884         71 TNPLIYAIDCDNDDAAKLLIRYGADVNRYAEEAKITPLYISVLHGCLKCLEILL----SYGADINIQTNDMVTPIELALM  146 (300)
T ss_pred             CCHHHHHHHcCCHHHHHHHHHcCCCcCcccCCCCCCHHHHHHHcCCHHHHHHHH----HCCCCCCCCCCCCCCHHHHHHH
Confidence            489999999999999999999999997644568999999999999999999999    6899999999999999999999


Q ss_pred             cCCCCc-ccccccCcccccccccccccccCCCCCHHHHHH
Q 019816           81 VCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINR  119 (335)
Q Consensus        81 ~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~  119 (335)
                      .++..+ .++        .  +.   ..+..+.+|.+++.
T Consensus       147 ~~~~~~~~~~--------~--~~---~~~~~~~~~~~~~~  173 (300)
T PHA02884        147 ICNNFLAFMI--------C--DN---EISNFYKHPKKILI  173 (300)
T ss_pred             hCChhHHHHh--------c--CC---cccccccChhhhhc
Confidence            888776 444        2  21   24667788888653

>PHA02736 Viral ankyrin protein; Provisional

Probab=99.51  E-value=1.1e-14  Score=119.88  Aligned_cols=93  Identities=11%  Similarity=0.016  Sum_probs=80.2

Q ss_pred             CchHhHHHhcCCH---HHHHHHhhhCCCcccccc-CCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhH
Q 019816            1 MTALHLAAGQGND---WIVQEIIQRCPECCELVD-DRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFH   76 (335)
Q Consensus         1 ~TpLH~Aa~~G~~---e~v~~Ll~~~~~~~~~~d-~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH   76 (335)
                      +||||+|+..|+.   ++++.|++.+++++. +| ..|+||||+|+..++.+++++|+.   ..+.+++.+|..|.||||
T Consensus        56 ~t~Lh~a~~~~~~~~~e~v~~Ll~~gadin~-~~~~~g~T~Lh~A~~~~~~~i~~~Ll~---~~g~d~n~~~~~g~tpL~  131 (154)
T PHA02736         56 KQCVHIVSNPDKADPQEKLKLLMEWGADING-KERVFGNTPLHIAVYTQNYELATWLCN---QPGVNMEILNYAFKTPYY  131 (154)
T ss_pred             CEEEEeecccCchhHHHHHHHHHHcCCCccc-cCCCCCCcHHHHHHHhCCHHHHHHHHh---CCCCCCccccCCCCCHHH
Confidence            5899999999987   468899999999876 56 599999999999999999999992   247899999999999999


Q ss_pred             HHHhcCCCCc-ccccccCcccccccccccc
Q 019816           77 VLAAVCPDPR-PYNAGYGIIPYKIAKGYYQ  105 (335)
Q Consensus        77 ~Aa~~g~~~~-~lL~~~~~~~~~~~~~~~~  105 (335)
                      +|+..|+.++ ++|        ...|++.+
T Consensus       132 ~A~~~~~~~i~~~L--------l~~ga~~~  153 (154)
T PHA02736        132 VACERHDAKMMNIL--------RAKGAQCK  153 (154)
T ss_pred             HHHHcCCHHHHHHH--------HHcCCCCC
Confidence            9999999888 777        66666543

>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]

Probab=99.50  E-value=2.7e-14  Score=145.72  Aligned_cols=108  Identities=20%  Similarity=0.179  Sum_probs=98.4

Q ss_pred             CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHh
Q 019816            1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAA   80 (335)
Q Consensus         1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~   80 (335)
                      .||||.||.+|+.++|++||+++++++. +|+.|+||||.||..|+.+++++|+    +.|+.+|..|.+|+||||+|+.
T Consensus       541 ~TpLh~A~~~g~v~~VkfLLe~gAdv~a-k~~~G~TPLH~Aa~~G~~~i~~LLl----k~GA~vna~d~~g~TpL~iA~~  615 (1143)
T KOG4177|consen  541 YTPLHVAVHYGNVDLVKFLLEHGADVNA-KDKLGYTPLHQAAQQGHNDIAELLL----KHGASVNAADLDGFTPLHIAVR  615 (1143)
T ss_pred             cchHHHHHhcCCchHHHHhhhCCccccc-cCCCCCChhhHHHHcChHHHHHHHH----HcCCCCCcccccCcchhHHHHH
Confidence            4899999999999999999999999976 7899999999999999999999999    6899999999999999999999


Q ss_pred             cCCCCc-ccccccCcccccccccc-----cccccCCCCCHHHHHHhc
Q 019816           81 VCPDPR-PYNAGYGIIPYKIAKGY-----YQAVNKQNISVEHINRYG  121 (335)
Q Consensus        81 ~g~~~~-~lL~~~~~~~~~~~~~~-----~~~~n~~G~Tpl~~a~~~  121 (335)
                      .|+.+. +++        +..+.+     ....|..|.+|.+++...
T Consensus       616 lg~~~~~k~l--------~~~~~~~~~~~~~~e~~~g~~p~~v~e~~  654 (1143)
T KOG4177|consen  616 LGYLSVVKLL--------KVVTATPAATDPVKENRKGAVPEDVAEEL  654 (1143)
T ss_pred             hcccchhhHH--------HhccCccccccchhhhhcccChhhHHHHh
Confidence            999999 777        444444     778899999999998854

>TIGR00870 trp transient-receptor-potential calcium channel protein

Probab=99.50  E-value=1.7e-14  Score=147.48  Aligned_cols=115  Identities=22%  Similarity=0.066  Sum_probs=91.2

Q ss_pred             CchHhHHHhcCCHHHHHHHhhhCCCccccc-------------cCCCCchHHHHHhcCCHhHHHHHHhcCCccccccccc
Q 019816            1 MTALHLAAGQGNDWIVQEIIQRCPECCELV-------------DDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEK   67 (335)
Q Consensus         1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~-------------d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~   67 (335)
                      +||||+||.+|+.++++.|+++|++++...             ...|+||||+|+..|+.+++++|+    +.++++|.+
T Consensus       129 ~TpLhlAa~~~~~eiVklLL~~GAdv~~~~~~~~~~~~~~~~~~~~g~tpL~~Aa~~~~~~iv~lLl----~~gadin~~  204 (743)
T TIGR00870       129 ITALHLAAHRQNYEIVKLLLERGASVPARACGDFFVKSQGVDSFYHGESPLNAAACLGSPSIVALLS----EDPADILTA  204 (743)
T ss_pred             CcHHHHHHHhCCHHHHHHHHhCCCCCCcCcCCchhhcCCCCCcccccccHHHHHHHhCCHHHHHHHh----cCCcchhhH
Confidence            499999999999999999999999876321             135999999999999999999999    578899999


Q ss_pred             CCCCCchhHHHHhcCCCC---------c-ccccccCccccccccccc----ccccCCCCCHHHHHHhcCCc
Q 019816           68 DVKGNTPFHVLAAVCPDP---------R-PYNAGYGIIPYKIAKGYY----QAVNKQNISVEHINRYGFPE  124 (335)
Q Consensus        68 d~~G~TpLH~Aa~~g~~~---------~-~lL~~~~~~~~~~~~~~~----~~~n~~G~Tpl~~a~~~~~~  124 (335)
                      |..|+||||+|+..+...         + +++.     .......+.    +.+|++|.||+|+|+..+..
T Consensus       205 d~~g~T~Lh~A~~~~~~~~~~~~l~~~~~~~l~-----~ll~~~~~~~el~~i~N~~g~TPL~~A~~~g~~  270 (743)
T TIGR00870       205 DSLGNTLLHLLVMENEFKAEYEELSCQMYNFAL-----SLLDKLRDSKELEVILNHQGLTPLKLAAKEGRI  270 (743)
T ss_pred             hhhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHH-----HHHhccCChHhhhhhcCCCCCCchhhhhhcCCc
Confidence            999999999999986321         2 2220     001222233    67899999999999977754

after chronic exposure to capsaicin. (McCleskey and Gold, 1999).

>PHA02730 ankyrin-like protein; Provisional

Probab=99.49  E-value=6.2e-14  Score=137.67  Aligned_cols=125  Identities=10%  Similarity=-0.107  Sum_probs=102.4

Q ss_pred             CchHhHHHhcC---CHHHHHHHhhhCCCccccccCCCCchHHHHHhcC--CHhHHHHHHhcCCcccccccccCCCCCchh
Q 019816            1 MTALHLAAGQG---NDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSF--DKSDLKHLLNEYPVVKNLIFEKDVKGNTPF   75 (335)
Q Consensus         1 ~TpLH~Aa~~G---~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g--~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpL   75 (335)
                      +||||+|+..|   +.|+++.|+++|+++.. +|.+|+||||+|+..+  +.+++++|++.  ..++..+..|..+.+||
T Consensus        42 ~TaLh~A~~~~~~~~~eivklLLs~GAdin~-kD~~G~TPLh~Aa~~~~~~~eIv~~Ll~~--~~~~~~~~~~~~~d~~l  118 (672)
T PHA02730         42 NNALHCYVSNKCDTDIKIVRLLLSRGVERLC-RNNEGLTPLGVYSKRKYVKSQIVHLLISS--YSNASNELTSNINDFDL  118 (672)
T ss_pred             CcHHHHHHHcCCcCcHHHHHHHHhCCCCCcc-cCCCCCChHHHHHHcCCCcHHHHHHHHhc--CCCCCcccccccCCchH
Confidence            59999999997   59999999999999976 7999999999999966  79999999932  12456688898999999


Q ss_pred             HHHHh--cCCCCc-ccccccCccccc-ccccccccccC-----CCCCHHHHHHhcCCchHHHHHHHHHHcCCC
Q 019816           76 HVLAA--VCPDPR-PYNAGYGIIPYK-IAKGYYQAVNK-----QNISVEHINRYGFPELEKEIKELAKADGNG  139 (335)
Q Consensus        76 H~Aa~--~g~~~~-~lL~~~~~~~~~-~~~~~~~~~n~-----~G~Tpl~~a~~~~~~~~~~i~~~l~~~~~~  139 (335)
                      |.++.  .++.++ ++|        + ..+.|++..++     .|.+|++++...+.   .+|+++|.++|+.
T Consensus       119 ~~y~~s~n~~~~~vk~L--------i~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~---~eIvklLi~~g~~  180 (672)
T PHA02730        119 YSYMSSDNIDLRLLKYL--------IVDKRIRPSKNTNYYIHCLGLVDIYVTTPNPR---PEVLLWLLKSECY  180 (672)
T ss_pred             HHHHHhcCCcHHHHHHH--------HHhcCCChhhhhhhhccccchhhhhHhcCCCc---hHHHHHHHHcCCc
Confidence            99998  555555 666        4 46677776543     89999999998874   4899999997765

>PHA02741 hypothetical protein; Provisional

Probab=99.47  E-value=6.9e-14  Score=116.99  Aligned_cols=85  Identities=15%  Similarity=0.096  Sum_probs=75.8

Q ss_pred             CchHhHHHhcCC----HHHHHHHhhhCCCcccccc-CCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchh
Q 019816            1 MTALHLAAGQGN----DWIVQEIIQRCPECCELVD-DRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPF   75 (335)
Q Consensus         1 ~TpLH~Aa~~G~----~e~v~~Ll~~~~~~~~~~d-~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpL   75 (335)
                      +||||+|+..|+    .++++.|++.+++++. +| .+|+||||+|+..++.+++++|+.   ..+.+++.+|.+|.|||
T Consensus        61 ~T~Lh~A~~~g~~~~~~~ii~~Ll~~gadin~-~~~~~g~TpLh~A~~~~~~~iv~~Ll~---~~g~~~~~~n~~g~tpL  136 (169)
T PHA02741         61 QMCIHIAAEKHEAQLAAEIIDHLIELGADINA-QEMLEGDTALHLAAHRRDHDLAEWLCC---QPGIDLHFCNADNKSPF  136 (169)
T ss_pred             CcHHHHHHHcCChHHHHHHHHHHHHcCCCCCC-CCcCCCCCHHHHHHHcCCHHHHHHHHh---CCCCCCCcCCCCCCCHH
Confidence            599999999999    5889999999999866 56 489999999999999999999992   14788999999999999


Q ss_pred             HHHHhcCCCCc-ccc
Q 019816           76 HVLAAVCPDPR-PYN   89 (335)
Q Consensus        76 H~Aa~~g~~~~-~lL   89 (335)
                      |+|+..++.++ ++|
T Consensus       137 ~~A~~~~~~~iv~~L  151 (169)
T PHA02741        137 ELAIDNEDVAMMQIL  151 (169)
T ss_pred             HHHHHCCCHHHHHHH
Confidence            99999998887 666

>PHA02917 ankyrin-like protein; Provisional

Probab=99.46  E-value=1.5e-13  Score=137.38  Aligned_cols=121  Identities=15%  Similarity=-0.118  Sum_probs=96.0

Q ss_pred             CchHhHHHhc---CCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhH----HHHHHhcCCcccccccccCCCCCc
Q 019816            1 MTALHLAAGQ---GNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSD----LKHLLNEYPVVKNLIFEKDVKGNT   73 (335)
Q Consensus         1 ~TpLH~Aa~~---G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~----v~~Ll~~~~~~~~~~n~~d~~G~T   73 (335)
                      +||||+||..   |+.++++.|++.|+++.. .|..|+||||+|+..|+.++    ++.|+    ..+...|..|  ..+
T Consensus        33 ~t~Lh~a~~~~~~~~~~~v~~Ll~~ga~v~~-~~~~g~TpL~~Aa~~g~~~v~~~~~~~Ll----~~~~~~n~~~--~~~  105 (661)
T PHA02917         33 NNALHAYLFNEHCNNVEVVKLLLDSGTNPLH-KNWRQLTPLEEYTNSRHVKVNKDIAMALL----EATGYSNIND--FNI  105 (661)
T ss_pred             CcHHHHHHHhhhcCcHHHHHHHHHCCCCccc-cCCCCCCHHHHHHHcCChhHHHHHHHHHH----hccCCCCCCC--cch
Confidence            5999998655   889999999999999965 79999999999999999654    45555    2222244433  347


Q ss_pred             hhHHHHhcCCCCc-ccccccCcccccccccccccccCCCCCHHHHHH--hcCCchHHHHHHHHHHcCCC
Q 019816           74 PFHVLAAVCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINR--YGFPELEKEIKELAKADGNG  139 (335)
Q Consensus        74 pLH~Aa~~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~--~~~~~~~~~i~~~l~~~~~~  139 (335)
                      ++|.|+..++.++ ++|        +..|+|++.+|.+|+||||.+.  ..+   ..+++++|.++|+.
T Consensus       106 ~~~~a~~~~~~e~vk~L--------l~~Gadin~~d~~g~T~L~~~~a~~~~---~~eivklLi~~Ga~  163 (661)
T PHA02917        106 FSYMKSKNVDVDLIKVL--------VEHGFDLSVKCENHRSVIENYVMTDDP---VPEIIDLFIENGCS  163 (661)
T ss_pred             HHHHHhhcCCHHHHHHH--------HHcCCCCCccCCCCccHHHHHHHccCC---CHHHHHHHHHcCCC
Confidence            7888999999999 888        8899999999999999999765  344   35888888886653

>PHA02792 ankyrin-like protein; Provisional

Probab=99.45  E-value=2.6e-13  Score=132.11  Aligned_cols=124  Identities=13%  Similarity=-0.042  Sum_probs=101.1

Q ss_pred             chHhHHHhcCCHHHHHHHhhhCCCccccccCCC--CchHHHHHhcCCHh---HHHHHHhcCCcccccccccCCCCCchhH
Q 019816            2 TALHLAAGQGNDWIVQEIIQRCPECCELVDDRG--WNVLHFAMVSFDKS---DLKHLLNEYPVVKNLIFEKDVKGNTPFH   76 (335)
Q Consensus         2 TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G--~t~Lh~A~~~g~~~---~v~~Ll~~~~~~~~~~n~~d~~G~TpLH   76 (335)
                      .++|.||..|+.++++.|+++|++++. +|.+|  .||||+|+.....+   ++++++    ..|+++|.+|..|+||||
T Consensus       341 n~~~~Aa~~gn~eIVelLIs~GADIN~-kD~~g~~~TpLh~A~~n~~~~v~~IlklLI----s~GADIN~kD~~G~TPLh  415 (631)
T PHA02792        341 NKYFQKFDNRDPKVVEYILKNGNVVVE-DDDNIINIMPLFPTLSIHESDVLSILKLCK----PYIDDINKIDKHGRSILY  415 (631)
T ss_pred             hHHHHHHHcCCHHHHHHHHHcCCchhh-hcCCCCChhHHHHHHHhccHhHHHHHHHHH----hcCCccccccccCcchHH
Confidence            358899999999999999999999966 67664  69999988776654   466666    678999999999999999


Q ss_pred             HHHhcCCCCc-ccccccCcccccccccccccccCCCCCHHHHHHh---cCCc----hHHHHHHHHHHcCC
Q 019816           77 VLAAVCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRY---GFPE----LEKEIKELAKADGN  138 (335)
Q Consensus        77 ~Aa~~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~---~~~~----~~~~i~~~l~~~~~  138 (335)
                      +|+..++.++ ++|        ...|++++.+|..|+||+++|..   .+..    ...++++.+.+.+.
T Consensus       416 ~Aa~~~n~eivelL--------Ls~GADIN~kD~~G~TpL~~A~~~~~~~~~~i~~~~~~il~lLLs~~p  477 (631)
T PHA02792        416 YCIESHSVSLVEWL--------IDNGADINITTKYGSTCIGICVILAHACIPEIAELYIKILEIILSKLP  477 (631)
T ss_pred             HHHHcCCHHHHHHH--------HHCCCCCCCcCCCCCCHHHHHHHHHhcccHHHHHHHHHHHHHHHhcCC
Confidence            9999999988 888        88899999999999999999974   2211    12456666666553

>KOG4214 consensus Myotrophin and similar proteins [Transcription]

Probab=99.44  E-value=1.1e-13  Score=99.78  Aligned_cols=102  Identities=16%  Similarity=0.042  Sum_probs=92.7

Q ss_pred             HhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHhcCC
Q 019816            4 LHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAAVCP   83 (335)
Q Consensus         4 LH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~~g~   83 (335)
                      +.|+.++|.++-|+.....+-+++..  ..|++|||+|+-+|+.+++++|+    ..|++++.+|+.|-|||--|++.||
T Consensus         6 ~~W~vkNG~~DeVk~~v~~g~nVn~~--~ggR~plhyAAD~GQl~ilefli----~iGA~i~~kDKygITPLLsAvwEGH   79 (117)
T KOG4214|consen    6 VAWNVKNGEIDEVKQSVNEGLNVNEI--YGGRTPLHYAADYGQLSILEFLI----SIGANIQDKDKYGITPLLSAVWEGH   79 (117)
T ss_pred             HhhhhccCcHHHHHHHHHccccHHHH--hCCcccchHhhhcchHHHHHHHH----HhccccCCccccCCcHHHHHHHHhh
Confidence            56899999999999999998777653  48999999999999999999999    6899999999999999999999999


Q ss_pred             CCc-ccccccCcccccccccccccccCCCCCHHHHHH
Q 019816           84 DPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINR  119 (335)
Q Consensus        84 ~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~  119 (335)
                      .++ ++|        +..|++...+--+|.+.++.+.
T Consensus        80 ~~cVklL--------L~~GAdrt~~~PdG~~~~eate  108 (117)
T KOG4214|consen   80 RDCVKLL--------LQNGADRTIHAPDGTALIEATE  108 (117)
T ss_pred             HHHHHHH--------HHcCcccceeCCCchhHHhhcc
Confidence            999 999        8999999999999998877554

>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]

Probab=99.43  E-value=1e-13  Score=133.44  Aligned_cols=110  Identities=20%  Similarity=0.138  Sum_probs=101.8

Q ss_pred             chHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHhc
Q 019816            2 TALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAAV   81 (335)
Q Consensus         2 TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~~   81 (335)
                      |+||.||.+|+.++++.|++..+-. ...|..|.+|||+|++.|+.++++.++    ..+..+|.....|.||||+|+++
T Consensus        51 Talhha~Lng~~~is~llle~ea~l-dl~d~kg~~plhlaaw~g~~e~vkmll----~q~d~~na~~~e~~tplhlaaqh  125 (854)
T KOG0507|consen   51 TLLHHAVLNGQNQISKLLLDYEALL-DLCDTKGILPLHLAAWNGNLEIVKMLL----LQTDILNAVNIENETPLHLAAQH  125 (854)
T ss_pred             hHHHHHHhcCchHHHHHHhcchhhh-hhhhccCcceEEehhhcCcchHHHHHH----hcccCCCcccccCcCccchhhhh
Confidence            7899999999999999999988765 457899999999999999999999998    45688999999999999999999


Q ss_pred             CCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhcCCc
Q 019816           82 CPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPE  124 (335)
Q Consensus        82 g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~~  124 (335)
                      |+.++ .+|        +.++.|...+|+.++|++++|++.+.-
T Consensus       126 gh~dvv~~L--------l~~~adp~i~nns~~t~ldlA~qfgr~  161 (854)
T KOG0507|consen  126 GHLEVVFYL--------LKKNADPFIRNNSKETVLDLASRFGRA  161 (854)
T ss_pred             cchHHHHHH--------HhcCCCccccCcccccHHHHHHHhhhh
Confidence            99999 888        899999999999999999999988753

>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]

Probab=99.42  E-value=6.9e-13  Score=114.69  Aligned_cols=121  Identities=23%  Similarity=0.163  Sum_probs=106.6

Q ss_pred             CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCC-----HhHHHHHHhcCCcccc---cccccCCCCC
Q 019816            1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFD-----KSDLKHLLNEYPVVKN---LIFEKDVKGN   72 (335)
Q Consensus         1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~-----~~~v~~Ll~~~~~~~~---~~n~~d~~G~   72 (335)
                      .+++|.++..+..++++.++..+.++ ..+|..|.||||+|+.+++     .++++.|+    ..++   ..+.+|.+|+
T Consensus        74 ~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~ll----~~g~~~~~~~~~~~~g~  148 (235)
T COG0666          74 RLPLHSAASKGDDKIVKLLLASGADV-NAKDADGDTPLHLAALNGNPPEGNIEVAKLLL----EAGADLDVNNLRDEDGN  148 (235)
T ss_pred             cCHHHHHHHcCcHHHHHHHHHcCCCc-ccccCCCCcHHHHHHhcCCcccchHHHHHHHH----HcCCCCCCccccCCCCC
Confidence            37899999999999999999999999 5689999999999999999     99999999    4666   7777799999


Q ss_pred             chhHHHHhcCCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhcCCchHHHHHHHHHHcC
Q 019816           73 TPFHVLAAVCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPELEKEIKELAKADG  137 (335)
Q Consensus        73 TpLH~Aa~~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~~~  137 (335)
                      ||||+|+..|+..+ .++        +..+.+++.+|..|.|++++|+..+..   ++...+.+.+
T Consensus       149 tpl~~A~~~~~~~~~~~l--------l~~~~~~~~~~~~g~t~l~~a~~~~~~---~~~~~l~~~~  203 (235)
T COG0666         149 TPLHWAALNGDADIVELL--------LEAGADPNSRNSYGVTALDPAAKNGRI---ELVKLLLDKG  203 (235)
T ss_pred             chhHHHHHcCchHHHHHH--------HhcCCCCcccccCCCcchhhhcccchH---HHHHHHHhcC
Confidence            99999999999988 888        788999999999999999999987743   5566555543

>TIGR00870 trp transient-receptor-potential calcium channel protein

Probab=99.41  E-value=6.4e-12  Score=128.61  Aligned_cols=79  Identities=14%  Similarity=0.096  Sum_probs=70.5

Q ss_pred             CCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccC--------------CCCCchhHHHHhcCCCCc-ccccccCccc
Q 019816           32 DRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKD--------------VKGNTPFHVLAAVCPDPR-PYNAGYGIIP   96 (335)
Q Consensus        32 ~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d--------------~~G~TpLH~Aa~~g~~~~-~lL~~~~~~~   96 (335)
                      ..|.||||+|+.+|+.++++.|+    ..|+++|.++              ..|.||||.|+..|+.++ ++|       
T Consensus       126 ~~G~TpLhlAa~~~~~eiVklLL----~~GAdv~~~~~~~~~~~~~~~~~~~~g~tpL~~Aa~~~~~~iv~lL-------  194 (743)
T TIGR00870       126 TPGITALHLAAHRQNYEIVKLLL----ERGASVPARACGDFFVKSQGVDSFYHGESPLNAAACLGSPSIVALL-------  194 (743)
T ss_pred             CCCCcHHHHHHHhCCHHHHHHHH----hCCCCCCcCcCCchhhcCCCCCcccccccHHHHHHHhCCHHHHHHH-------
Confidence            46999999999999999999999    5678887653              359999999999999999 888       


Q ss_pred             ccccccccccccCCCCCHHHHHHhcC
Q 019816           97 YKIAKGYYQAVNKQNISVEHINRYGF  122 (335)
Q Consensus        97 ~~~~~~~~~~~n~~G~Tpl~~a~~~~  122 (335)
                       ++.++|++.+|..|+||+|+|+..+
T Consensus       195 -l~~gadin~~d~~g~T~Lh~A~~~~  219 (743)
T TIGR00870       195 -SEDPADILTADSLGNTLLHLLVMEN  219 (743)
T ss_pred             -hcCCcchhhHhhhhhHHHHHHHhhh
Confidence             8899999999999999999999654

after chronic exposure to capsaicin. (McCleskey and Gold, 1999).

>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A

Probab=99.38  E-value=1e-12  Score=88.11  Aligned_cols=53  Identities=32%  Similarity=0.369  Sum_probs=43.4

Q ss_pred             CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHH
Q 019816            1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLL   54 (335)
Q Consensus         1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll   54 (335)
                      +||||+||+.|+.+++++|++++.+++. +|.+|+||||+|+.+|+.+++++|+
T Consensus         2 ~t~lh~A~~~g~~~~~~~Ll~~~~din~-~d~~g~t~lh~A~~~g~~~~~~~Ll   54 (54)
T PF13637_consen    2 RTPLHWAARSGNLEIVKLLLEHGADINA-QDEDGRTPLHYAAKNGNIDIVKFLL   54 (54)
T ss_dssp             SBHHHHHHHTT-HHHHHHHHHTTSGTT--B-TTS--HHHHHHHTT-HHHHHHHH
T ss_pred             ChHHHHHHHhCCHHHHHHHHHCCCCCCC-CCCCCCCHHHHHHHccCHHHHHHHC
Confidence            5899999999999999999999999866 5999999999999999999999875

...

>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A

Probab=99.38  E-value=3.4e-13  Score=91.10  Aligned_cols=56  Identities=25%  Similarity=0.259  Sum_probs=32.3

Q ss_pred             HhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHH
Q 019816           19 IIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVL   78 (335)
Q Consensus        19 Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~A   78 (335)
                      ||++++.....+|..|+||||+||.+|+.+++++|+    ..+++++.+|.+|+||||+|
T Consensus         1 LL~~~~~~~n~~d~~G~T~LH~A~~~g~~~~v~~Ll----~~g~d~~~~d~~G~Tpl~~A   56 (56)
T PF13857_consen    1 LLEHGPADVNAQDKYGNTPLHWAARYGHSEVVRLLL----QNGADPNAKDKDGQTPLHYA   56 (56)
T ss_dssp             -----T--TT---TTS--HHHHHHHHT-HHHHHHHH----HCT--TT---TTS--HHHH-
T ss_pred             CCccCcCCCcCcCCCCCcHHHHHHHcCcHHHHHHHH----HCcCCCCCCcCCCCCHHHhC
Confidence            567774444668999999999999999999999999    57899999999999999997

>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional

Probab=99.37  E-value=7.5e-13  Score=132.98  Aligned_cols=111  Identities=13%  Similarity=-0.039  Sum_probs=94.4

Q ss_pred             hHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHhcC
Q 019816            3 ALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAAVC   82 (335)
Q Consensus         3 pLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~~g   82 (335)
                      +||.||..|+.+.++.|++.+++++. +|.+|+||||+|+.+|+.+++++|+    ..|+++|.+|.+|+||||+|+..|
T Consensus        85 ~L~~aa~~G~~~~vk~LL~~Gadin~-~d~~G~TpLh~Aa~~g~~eiv~~LL----~~Gadvn~~d~~G~TpLh~A~~~g  159 (664)
T PTZ00322         85 ELCQLAASGDAVGARILLTGGADPNC-RDYDGRTPLHIACANGHVQVVRVLL----EFGADPTLLDKDGKTPLELAEENG  159 (664)
T ss_pred             HHHHHHHcCCHHHHHHHHHCCCCCCC-cCCCCCcHHHHHHHCCCHHHHHHHH----HCCCCCCCCCCCCCCHHHHHHHCC
Confidence            58899999999999999999999865 7999999999999999999999999    578999999999999999999999


Q ss_pred             CCCc-ccccccCcccccccccccccccCCCCCHHHHHH
Q 019816           83 PDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINR  119 (335)
Q Consensus        83 ~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~  119 (335)
                      +.++ ++|..+.... ...+++.+..+..|.+|+....
T Consensus       160 ~~~iv~~Ll~~~~~~-~~~ga~~~~~~~~g~~~~~~~~  196 (664)
T PTZ00322        160 FREVVQLLSRHSQCH-FELGANAKPDSFTGKPPSLEDS  196 (664)
T ss_pred             cHHHHHHHHhCCCcc-cccCCCCCccccCCCCccchhh
Confidence            9998 6662111111 3348888888888888776655

>PHA02792 ankyrin-like protein; Provisional

Probab=99.34  E-value=1.4e-12  Score=126.94  Aligned_cols=124  Identities=11%  Similarity=-0.026  Sum_probs=100.4

Q ss_pred             chHh-HHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHh-cCCHhHHHHHHhcCCc--------------------
Q 019816            2 TALH-LAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMV-SFDKSDLKHLLNEYPV--------------------   59 (335)
Q Consensus         2 TpLH-~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~-~g~~~~v~~Ll~~~~~--------------------   59 (335)
                      +|+| .|+..|++|++++|+.+|++++. ++..|++|+|+|+. +++.+++++|++.--.                    
T Consensus        73 ~~~~~~~s~n~~lElvk~LI~~GAdvN~-~~n~~~~~l~ya~~~~~~~eivk~Ll~~Gad~~~~~~~g~~~~~~~~~~~~  151 (631)
T PHA02792         73 DIFEYLCSDNIDIELLKLLISKGLEINS-IKNGINIVEKYATTSNPNVDVFKLLLDKGIPTCSNIQYGYKIIIEQITRAE  151 (631)
T ss_pred             cHHHHHHHhcccHHHHHHHHHcCCCccc-ccCCCCcceeEeecCCCChHHHHHHHHCCCCcccccccCcchhhhhccccc
Confidence            3566 56678999999999999999976 57779999999966 6999999999953100                    


Q ss_pred             ------------ccccccccCCCCCchhHHHHhcC-------CCCc-ccccccCcccccccccccccccCCCCCHHHHHH
Q 019816           60 ------------VKNLIFEKDVKGNTPFHVLAAVC-------PDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINR  119 (335)
Q Consensus        60 ------------~~~~~n~~d~~G~TpLH~Aa~~g-------~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~  119 (335)
                                  .+-.+|.+|..|+||||+|+..+       +.++ ++|        +.+|++++.+|..|.||||+|.
T Consensus       152 ~~~~~~~~~~~~~~~~i~~~~~~g~t~L~~~i~~~s~~~~~~~~~v~k~L--------i~~g~~~~~~d~~g~t~l~~~~  223 (631)
T PHA02792        152 YYNWDDELDDYDYDYTTDYDDRMGKTVLYYYIITRSQDGYATSLDVINYL--------ISHEKEMRYYTYREHTTLYYYV  223 (631)
T ss_pred             ccchhhhccccccccccccCCCCCCchHHHHHhhCCcccccCCHHHHHHH--------HhCCCCcCccCCCCChHHHHHH
Confidence                        01245678889999999999988       5666 888        8999999999999999999999


Q ss_pred             hcCCchHHHHHHHHHH
Q 019816          120 YGFPELEKEIKELAKA  135 (335)
Q Consensus       120 ~~~~~~~~~i~~~l~~  135 (335)
                      ... .+..+|++.|.+
T Consensus       224 ~~~-~i~~ei~~~L~~  238 (631)
T PHA02792        224 DKC-DIKREIFDALFD  238 (631)
T ss_pred             Hcc-cchHHHHHHHHh
Confidence            776 334578887766

>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]

Probab=99.34  E-value=8.1e-13  Score=110.16  Aligned_cols=121  Identities=11%  Similarity=-0.057  Sum_probs=102.8

Q ss_pred             CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHh
Q 019816            1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAA   80 (335)
Q Consensus         1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~   80 (335)
                      ++|+.++...-+++.+..+.+..   .+..|+.|.|||.||+.+|+.++|++|+    ..|++++...+...|+|.+|+.
T Consensus       130 ~s~~slsVhql~L~~~~~~~~n~---VN~~De~GfTpLiWAaa~G~i~vV~fLL----~~GAdp~~lgk~resALsLAt~  202 (296)
T KOG0502|consen  130 WSPLSLSVHQLHLDVVDLLVNNK---VNACDEFGFTPLIWAAAKGHIPVVQFLL----NSGADPDALGKYRESALSLATR  202 (296)
T ss_pred             CChhhHHHHHHHHHHHHHHhhcc---ccCccccCchHhHHHHhcCchHHHHHHH----HcCCChhhhhhhhhhhHhHHhc
Confidence            47888888888888776655433   3447999999999999999999999999    5799999999999999999999


Q ss_pred             cCCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhcCCchHHHHHHHHHHcCCC
Q 019816           81 VCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPELEKEIKELAKADGNG  139 (335)
Q Consensus        81 ~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~~~~~  139 (335)
                      .|..++ ++|        +.+++|+|.-|.+|-|||-+|++.+   +..+++.|...|+.
T Consensus       203 ggytdiV~lL--------L~r~vdVNvyDwNGgTpLlyAvrgn---hvkcve~Ll~sGAd  251 (296)
T KOG0502|consen  203 GGYTDIVELL--------LTREVDVNVYDWNGGTPLLYAVRGN---HVKCVESLLNSGAD  251 (296)
T ss_pred             CChHHHHHHH--------HhcCCCcceeccCCCceeeeeecCC---hHHHHHHHHhcCCC
Confidence            999999 998        8999999999999999999999876   34667777665554

>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain

Probab=99.31  E-value=3.3e-12  Score=94.89  Aligned_cols=83  Identities=23%  Similarity=0.071  Sum_probs=71.3

Q ss_pred             HHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHhcCCCCc-ccccccCcccccccccccccccCCCCCHHH
Q 019816           38 LHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAAVCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEH  116 (335)
Q Consensus        38 Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~  116 (335)
                      ||+|+..|+.++++.|+    ..+..++.    |+||||+|+..|+.++ ++|        .+.|.+++.+|.+|+||+|
T Consensus         1 L~~A~~~~~~~~~~~ll----~~~~~~~~----~~~~l~~A~~~~~~~~~~~L--------l~~g~~~~~~~~~g~t~L~   64 (89)
T PF12796_consen    1 LHIAAQNGNLEILKFLL----EKGADINL----GNTALHYAAENGNLEIVKLL--------LENGADINSQDKNGNTALH   64 (89)
T ss_dssp             HHHHHHTTTHHHHHHHH----HTTSTTTS----SSBHHHHHHHTTTHHHHHHH--------HHTTTCTT-BSTTSSBHHH
T ss_pred             CHHHHHcCCHHHHHHHH----HCcCCCCC----CCCHHHHHHHcCCHHHHHHH--------HHhcccccccCCCCCCHHH
Confidence            79999999999999999    34455554    9999999999999999 888        8899999999999999999


Q ss_pred             HHHhcCCchHHHHHHHHHHcCCC
Q 019816          117 INRYGFPELEKEIKELAKADGNG  139 (335)
Q Consensus       117 ~a~~~~~~~~~~i~~~l~~~~~~  139 (335)
                      +|+..+   ..+++++|.+.|..
T Consensus        65 ~A~~~~---~~~~~~~Ll~~g~~   84 (89)
T PF12796_consen   65 YAAENG---NLEIVKLLLEHGAD   84 (89)
T ss_dssp             HHHHTT---HHHHHHHHHHTTT-
T ss_pred             HHHHcC---CHHHHHHHHHcCCC
Confidence            999887   45899998887655

These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....

>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]

Probab=99.29  E-value=2e-12  Score=120.52  Aligned_cols=109  Identities=24%  Similarity=0.128  Sum_probs=97.2

Q ss_pred             CchHhHHHhcCCHHHHHHHhhhCCCcc-----------------------------------------------------
Q 019816            1 MTALHLAAGQGNDWIVQEIIQRCPECC-----------------------------------------------------   27 (335)
Q Consensus         1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~-----------------------------------------------------   27 (335)
                      |||||.|+..||..++++|++.+++..                                                     
T Consensus       107 wtPlhaaascg~~~i~~~li~~gA~~~avNsdg~~P~dl~e~ea~~~~l~~~~~r~gi~iea~R~~~e~~ml~D~~q~l~  186 (527)
T KOG0505|consen  107 WTPLHAAASCGYLNIVEYLIQHGANLLAVNSDGNMPYDLAEDEATLDVLETEMARQGIDIEAARKAEEQTMLDDARQWLN  186 (527)
T ss_pred             CCcchhhcccccHHHHHHHHHhhhhhhhccCCCCCccccccCcchhHHHHHHHHHhcccHHHHhhhhHHHHHHHHHHHHh
Confidence            799999999999999999998776321                                                     


Q ss_pred             -----ccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHhcCCCCc-ccccccCcccccccc
Q 019816           28 -----ELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAAVCPDPR-PYNAGYGIIPYKIAK  101 (335)
Q Consensus        28 -----~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~~g~~~~-~lL~~~~~~~~~~~~  101 (335)
                           ...+.+|.|.||+|+.+|..++.++|+    ..+..++.+|.+|+||||.|+.-|+.+. ++|        ...+
T Consensus       187 ~G~~~d~~~~rG~T~lHvAaa~Gy~e~~~lLl----~ag~~~~~~D~dgWtPlHAAA~Wg~~~~~elL--------~~~g  254 (527)
T KOG0505|consen  187 AGAELDARHARGATALHVAAANGYTEVAALLL----QAGYSVNIKDYDGWTPLHAAAHWGQEDACELL--------VEHG  254 (527)
T ss_pred             ccccccccccccchHHHHHHhhhHHHHHHHHH----HhccCcccccccCCCcccHHHHhhhHhHHHHH--------HHhh
Confidence                 113445889999999999999999999    5889999999999999999999999999 888        8999


Q ss_pred             cccccccCCCCCHHHHHHhc
Q 019816          102 GYYQAVNKQNISVEHINRYG  121 (335)
Q Consensus       102 ~~~~~~n~~G~Tpl~~a~~~  121 (335)
                      ++.+.++..|+||+++|...
T Consensus       255 a~~d~~t~~g~~p~dv~dee  274 (527)
T KOG0505|consen  255 ADMDAKTKMGETPLDVADEE  274 (527)
T ss_pred             cccchhhhcCCCCccchhhh
Confidence            99999999999999999853

>KOG0514 consensus Ankyrin repeat protein [General function prediction only]

Probab=99.23  E-value=9.9e-12  Score=110.81  Aligned_cols=85  Identities=26%  Similarity=0.174  Sum_probs=78.6

Q ss_pred             CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHh
Q 019816            1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAA   80 (335)
Q Consensus         1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~   80 (335)
                      +|+|++|+.+|+.++|+.||..++|++. +|.+|.|+|+.||.+||.+++++|+.   ..+++....|.+|.|+|.+|-.
T Consensus       341 QTALMLAVSHGr~d~vk~LLacgAdVNi-QDdDGSTALMCA~EHGhkEivklLLA---~p~cd~sLtD~DgSTAl~IAle  416 (452)
T KOG0514|consen  341 QTALMLAVSHGRVDMVKALLACGADVNI-QDDDGSTALMCAAEHGHKEIVKLLLA---VPSCDISLTDVDGSTALSIALE  416 (452)
T ss_pred             chhhhhhhhcCcHHHHHHHHHccCCCcc-ccCCccHHHhhhhhhChHHHHHHHhc---cCcccceeecCCCchhhhhHHh
Confidence            5899999999999999999999999976 79999999999999999999999993   3568889999999999999999


Q ss_pred             cCCCCc-ccc
Q 019816           81 VCPDPR-PYN   89 (335)
Q Consensus        81 ~g~~~~-~lL   89 (335)
                      .||.++ .+|
T Consensus       417 agh~eIa~ml  426 (452)
T KOG0514|consen  417 AGHREIAVML  426 (452)
T ss_pred             cCchHHHHHH
Confidence            999998 444

>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A

Probab=99.23  E-value=1.7e-12  Score=87.59  Aligned_cols=49  Identities=20%  Similarity=0.083  Sum_probs=31.8

Q ss_pred             ccccccCCCCCchhHHHHhcCCCCc-ccccccCcccccccccccccccCCCCCHHHHH
Q 019816           62 NLIFEKDVKGNTPFHVLAAVCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHIN  118 (335)
Q Consensus        62 ~~~n~~d~~G~TpLH~Aa~~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a  118 (335)
                      .++|.+|..|+||||+|++.|+.++ ++|        +..+++++.+|++|+||+|+|
T Consensus         7 ~~~n~~d~~G~T~LH~A~~~g~~~~v~~L--------l~~g~d~~~~d~~G~Tpl~~A   56 (56)
T PF13857_consen    7 ADVNAQDKYGNTPLHWAARYGHSEVVRLL--------LQNGADPNAKDKDGQTPLHYA   56 (56)
T ss_dssp             --TT---TTS--HHHHHHHHT-HHHHHHH--------HHCT--TT---TTS--HHHH-
T ss_pred             CCCcCcCCCCCcHHHHHHHcCcHHHHHHH--------HHCcCCCCCCcCCCCCHHHhC
Confidence            7899999999999999999999999 888        889999999999999999987

>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A

Probab=99.21  E-value=7.1e-12  Score=83.99  Aligned_cols=52  Identities=29%  Similarity=0.208  Sum_probs=41.7

Q ss_pred             CCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHhcCCCCc-ccc
Q 019816           34 GWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAAVCPDPR-PYN   89 (335)
Q Consensus        34 G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~~g~~~~-~lL   89 (335)
                      |+||||+|+..|+.+++++|+    ..+.++|.+|.+|+||||+|++.|+.++ ++|
T Consensus         1 g~t~lh~A~~~g~~~~~~~Ll----~~~~din~~d~~g~t~lh~A~~~g~~~~~~~L   53 (54)
T PF13637_consen    1 GRTPLHWAARSGNLEIVKLLL----EHGADINAQDEDGRTPLHYAAKNGNIDIVKFL   53 (54)
T ss_dssp             SSBHHHHHHHTT-HHHHHHHH----HTTSGTT-B-TTS--HHHHHHHTT-HHHHHHH
T ss_pred             CChHHHHHHHhCCHHHHHHHH----HCCCCCCCCCCCCCCHHHHHHHccCHHHHHHH
Confidence            789999999999999999999    4678999999999999999999999877 554

...

>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]

Probab=99.19  E-value=2.1e-11  Score=117.70  Aligned_cols=122  Identities=21%  Similarity=0.122  Sum_probs=105.4

Q ss_pred             hHhHHHhcCCHHHHHHHhhhC------------CCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCC
Q 019816            3 ALHLAAGQGNDWIVQEIIQRC------------PECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVK   70 (335)
Q Consensus         3 pLH~Aa~~G~~e~v~~Ll~~~------------~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~   70 (335)
                      -|.-|++.|+.+.+..+|+..            ++..+..|.+|.|.||.||.+|+.+++++|+    +..+.++.+|..
T Consensus         6 el~~a~ka~d~~tva~ll~~~~~r~~~l~~~trsds~n~qd~~gfTalhha~Lng~~~is~lll----e~ea~ldl~d~k   81 (854)
T KOG0507|consen    6 ELIDACKAGDYDTVALLLSSKKGRSGLLFFTTRSDSHNLQDYSGFTLLHHAVLNGQNQISKLLL----DYEALLDLCDTK   81 (854)
T ss_pred             hHHHhhhcccHHHHHHhccCCCCCCCCCCCCCCCccccccCccchhHHHHHHhcCchHHHHHHh----cchhhhhhhhcc
Confidence            466799999999999999752            2334567899999999999999999999999    577899999999


Q ss_pred             CCchhHHHHhcCCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhcCCchHHHHHHHHHHcCCC
Q 019816           71 GNTPFHVLAAVCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPELEKEIKELAKADGNG  139 (335)
Q Consensus        71 G~TpLH~Aa~~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~~~~~  139 (335)
                      |.+|||+|++.|+.++ +++        +.++..+|+.+-.|.||||.+++.++.   +...+|..+++.
T Consensus        82 g~~plhlaaw~g~~e~vkml--------l~q~d~~na~~~e~~tplhlaaqhgh~---dvv~~Ll~~~ad  140 (854)
T KOG0507|consen   82 GILPLHLAAWNGNLEIVKML--------LLQTDILNAVNIENETPLHLAAQHGHL---EVVFYLLKKNAD  140 (854)
T ss_pred             CcceEEehhhcCcchHHHHH--------HhcccCCCcccccCcCccchhhhhcch---HHHHHHHhcCCC
Confidence            9999999999999999 777        667788999999999999999988754   777777777666

>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]

Probab=99.16  E-value=3.2e-11  Score=112.00  Aligned_cols=103  Identities=22%  Similarity=0.122  Sum_probs=87.8

Q ss_pred             HhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHhcCC
Q 019816            4 LHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAAVCP   83 (335)
Q Consensus         4 LH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~~g~   83 (335)
                      |.-|+..|.+|+|+..+..-.|. .+.|+.|-|+||-|+..||.+||++|+    ..|+++|..|.+||||||+|+.+++
T Consensus       554 LLDaaLeGEldlVq~~i~ev~Dp-SqpNdEGITaLHNAiCaghyeIVkFLi----~~ganVNa~DSdGWTPLHCAASCNn  628 (752)
T KOG0515|consen  554 LLDAALEGELDLVQRIIYEVTDP-SQPNDEGITALHNAICAGHYEIVKFLI----EFGANVNAADSDGWTPLHCAASCNN  628 (752)
T ss_pred             HHhhhhcchHHHHHHHHHhhcCC-CCCCccchhHHhhhhhcchhHHHHHHH----hcCCcccCccCCCCchhhhhhhcCc
Confidence            45688999999999999887777 447999999999999999999999999    6899999999999999999999999


Q ss_pred             CCc-ccccccCcccccccccccccc-cCCCCCHHHHHH
Q 019816           84 DPR-PYNAGYGIIPYKIAKGYYQAV-NKQNISVEHINR  119 (335)
Q Consensus        84 ~~~-~lL~~~~~~~~~~~~~~~~~~-n~~G~Tpl~~a~  119 (335)
                      ..+ +.|        ...|+-+-+. =.++.||.+-+.
T Consensus       629 v~~ckqL--------Ve~GaavfAsTlSDmeTa~eKCe  658 (752)
T KOG0515|consen  629 VPMCKQL--------VESGAAVFASTLSDMETAAEKCE  658 (752)
T ss_pred             hHHHHHH--------HhccceEEeeecccccchhhhcc
Confidence            888 666        5566555443 357889887665

>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]

Probab=99.15  E-value=1.1e-10  Score=101.07  Aligned_cols=117  Identities=14%  Similarity=0.016  Sum_probs=101.2

Q ss_pred             chHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccc-cCCCCCchhHHHHh
Q 019816            2 TALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFE-KDVKGNTPFHVLAA   80 (335)
Q Consensus         2 TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~-~d~~G~TpLH~Aa~   80 (335)
                      .||.-+.-+|+.+....||+.-..+ +.+|..|.++|..|+..|+.+.++.|+    +.|+++|. ++..+.||||.|+.
T Consensus        14 ~~Lle~i~Kndt~~a~~LLs~vr~v-n~~D~sGMs~LahAaykGnl~~v~lll----~~gaDvN~~qhg~~YTpLmFAAL   88 (396)
T KOG1710|consen   14 SPLLEAIDKNDTEAALALLSTVRQV-NQRDPSGMSVLAHAAYKGNLTLVELLL----ELGADVNDKQHGTLYTPLMFAAL   88 (396)
T ss_pred             hHHHHHHccCcHHHHHHHHHHhhhh-hccCCCcccHHHHHHhcCcHHHHHHHH----HhCCCcCcccccccccHHHHHHH
Confidence            5888999999999999999875555 448999999999999999999999999    68899985 57789999999999


Q ss_pred             cCCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhcCCchHHHHHH
Q 019816           81 VCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPELEKEIKE  131 (335)
Q Consensus        81 ~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~  131 (335)
                      .|+.++ ++|        ++.|+.....|.-|+|+-.+|+--|.....+|++
T Consensus        89 SGn~dvcrll--------ldaGa~~~~vNsvgrTAaqmAAFVG~H~CV~iIN  132 (396)
T KOG1710|consen   89 SGNQDVCRLL--------LDAGARMYLVNSVGRTAAQMAAFVGHHECVAIIN  132 (396)
T ss_pred             cCCchHHHHH--------HhccCccccccchhhhHHHHHHHhcchHHHHHHh
Confidence            999999 888        8999999999999999999999555444444443

>KOG4214 consensus Myotrophin and similar proteins [Transcription]

Probab=99.09  E-value=1.7e-10  Score=83.40  Aligned_cols=72  Identities=22%  Similarity=0.108  Sum_probs=64.5

Q ss_pred             CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHH
Q 019816            1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHV   77 (335)
Q Consensus         1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~   77 (335)
                      +||||+||-.|..+++++|+..++++.. +|+.|-|||.-|+..||.++|++|+    +.|++-..+.-+|.+.+-.
T Consensus        35 R~plhyAAD~GQl~ilefli~iGA~i~~-kDKygITPLLsAvwEGH~~cVklLL----~~GAdrt~~~PdG~~~~ea  106 (117)
T KOG4214|consen   35 RTPLHYAADYGQLSILEFLISIGANIQD-KDKYGITPLLSAVWEGHRDCVKLLL----QNGADRTIHAPDGTALIEA  106 (117)
T ss_pred             cccchHhhhcchHHHHHHHHHhccccCC-ccccCCcHHHHHHHHhhHHHHHHHH----HcCcccceeCCCchhHHhh
Confidence            6899999999999999999999999966 8999999999999999999999999    5778777777788776543

>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]

Probab=99.05  E-value=2.2e-10  Score=98.95  Aligned_cols=85  Identities=24%  Similarity=0.167  Sum_probs=78.5

Q ss_pred             CchHhHHHhcCC-----HHHHHHHhhhCC--CccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCc
Q 019816            1 MTALHLAAGQGN-----DWIVQEIIQRCP--ECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNT   73 (335)
Q Consensus         1 ~TpLH~Aa~~G~-----~e~v~~Ll~~~~--~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~T   73 (335)
                      .||||+|+..|+     .++++.|++.++  +....+|.+|+||||+|+..|+.++++.++    ..+++++..|..|.|
T Consensus       107 ~t~l~~a~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~ll----~~~~~~~~~~~~g~t  182 (235)
T COG0666         107 DTPLHLAALNGNPPEGNIEVAKLLLEAGADLDVNNLRDEDGNTPLHWAALNGDADIVELLL----EAGADPNSRNSYGVT  182 (235)
T ss_pred             CcHHHHHHhcCCcccchHHHHHHHHHcCCCCCCccccCCCCCchhHHHHHcCchHHHHHHH----hcCCCCcccccCCCc
Confidence            489999999999     999999999999  677778999999999999999999999999    578899999999999


Q ss_pred             hhHHHHhcCCCCc-ccc
Q 019816           74 PFHVLAAVCPDPR-PYN   89 (335)
Q Consensus        74 pLH~Aa~~g~~~~-~lL   89 (335)
                      ++|.|+..++... ..+
T Consensus       183 ~l~~a~~~~~~~~~~~l  199 (235)
T COG0666         183 ALDPAAKNGRIELVKLL  199 (235)
T ss_pred             chhhhcccchHHHHHHH
Confidence            9999999999888 554

>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

Probab=99.04  E-value=5.3e-10  Score=87.20  Aligned_cols=93  Identities=22%  Similarity=0.129  Sum_probs=80.3

Q ss_pred             ccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHhcCCCCc-ccccccCccccccccccccccc
Q 019816           30 VDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAAVCPDPR-PYNAGYGIIPYKIAKGYYQAVN  108 (335)
Q Consensus        30 ~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~~g~~~~-~lL~~~~~~~~~~~~~~~~~~n  108 (335)
                      .|.+|+||||+|+..++.++++.|+    ..+...+.+|..|.||||.|+..++.+. +++        ...+.+.+..|
T Consensus         3 ~~~~g~t~l~~a~~~~~~~~i~~li----~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~l--------l~~~~~~~~~~   70 (126)
T cd00204           3 RDEDGRTPLHLAASNGHLEVVKLLL----ENGADVNAKDNDGRTPLHLAAKNGHLEIVKLL--------LEKGADVNARD   70 (126)
T ss_pred             cCcCCCCHHHHHHHcCcHHHHHHHH----HcCCCCCccCCCCCcHHHHHHHcCCHHHHHHH--------HHcCCCccccC
Confidence            4678999999999999999999999    4556668999999999999999999887 777        67777889999


Q ss_pred             CCCCCHHHHHHhcCCchHHHHHHHHHHcC
Q 019816          109 KQNISVEHINRYGFPELEKEIKELAKADG  137 (335)
Q Consensus       109 ~~G~Tpl~~a~~~~~~~~~~i~~~l~~~~  137 (335)
                      ..|.||+|+|...+.   .+++++|...+
T Consensus        71 ~~~~~~l~~a~~~~~---~~~~~~L~~~~   96 (126)
T cd00204          71 KDGNTPLHLAARNGN---LDVVKLLLKHG   96 (126)
T ss_pred             CCCCCHHHHHHHcCc---HHHHHHHHHcC
Confidence            999999999998774   47788777654

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.

>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]

Probab=99.01  E-value=4.7e-10  Score=109.69  Aligned_cols=122  Identities=21%  Similarity=0.197  Sum_probs=97.7

Q ss_pred             CchHhHHHh---cCCHHHHHHHhhhCCCcccc----ccCCCCchHHHHHhcCCHhHHHHHHhcCCccccccccc------
Q 019816            1 MTALHLAAG---QGNDWIVQEIIQRCPECCEL----VDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEK------   67 (335)
Q Consensus         1 ~TpLH~Aa~---~G~~e~v~~Ll~~~~~~~~~----~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~------   67 (335)
                      +|.||.|.-   .++.++++.|++..|...+.    -...|+||||+|+.+.+.+.|++|+    ..|++++++      
T Consensus       144 ET~Lh~~lL~~~~~~n~la~~LL~~~p~lind~~~~eeY~GqSaLHiAIv~~~~~~V~lLl----~~gADV~aRa~G~FF  219 (782)
T KOG3676|consen  144 ETLLHKALLNLSDGHNELARVLLEIFPKLINDIYTSEEYYGQSALHIAIVNRDAELVRLLL----AAGADVHARACGAFF  219 (782)
T ss_pred             hhHHHHHHhcCchhHHHHHHHHHHHhHHHhhhhhhhHhhcCcchHHHHHHhccHHHHHHHH----HcCCchhhHhhcccc
Confidence            588999987   46679999999998865332    1336999999999999999999999    466666542      


Q ss_pred             ---CC--------------CCCchhHHHHhcCCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhcCCchHHHH
Q 019816           68 ---DV--------------KGNTPFHVLAAVCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPELEKEI  129 (335)
Q Consensus        68 ---d~--------------~G~TpLH~Aa~~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i  129 (335)
                         |.              -|..||.+||..++.++ ++|        ..+++|++++|..|+|.||+.+...   ..++
T Consensus       220 ~~~dqk~~rk~T~Y~G~~YfGEyPLSfAAC~nq~eivrlL--------l~~gAd~~aqDS~GNTVLH~lVi~~---~~~M  288 (782)
T KOG3676|consen  220 CPDDQKASRKSTNYTGYFYFGEYPLSFAACTNQPEIVRLL--------LAHGADPNAQDSNGNTVLHMLVIHF---VTEM  288 (782)
T ss_pred             CcccccccccccCCcceeeeccCchHHHHHcCCHHHHHHH--------HhcCCCCCccccCCChHHHHHHHHH---HHHH
Confidence               21              36789999999999999 999        8899999999999999999998652   4456


Q ss_pred             HHHHHHcC
Q 019816          130 KELAKADG  137 (335)
Q Consensus       130 ~~~l~~~~  137 (335)
                      .+.+.+.+
T Consensus       289 y~~~L~~g  296 (782)
T KOG3676|consen  289 YDLALELG  296 (782)
T ss_pred             HHHHHhcC
Confidence            66555533

>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional

Probab=98.93  E-value=1.5e-09  Score=109.40  Aligned_cols=85  Identities=16%  Similarity=-0.004  Sum_probs=76.4

Q ss_pred             hHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHhcCCCCc-ccccccCcccccccccccccccCCCCCHH
Q 019816           37 VLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAAVCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVE  115 (335)
Q Consensus        37 ~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl  115 (335)
                      .|+.|+..|+.+.++.|+    ..|+++|.+|.+|+||||+|+..|+.++ ++|        +..|++++.+|.+|.|||
T Consensus        85 ~L~~aa~~G~~~~vk~LL----~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~L--------L~~Gadvn~~d~~G~TpL  152 (664)
T PTZ00322         85 ELCQLAASGDAVGARILL----TGGADPNCRDYDGRTPLHIACANGHVQVVRVL--------LEFGADPTLLDKDGKTPL  152 (664)
T ss_pred             HHHHHHHcCCHHHHHHHH----HCCCCCCCcCCCCCcHHHHHHHCCCHHHHHHH--------HHCCCCCCCCCCCCCCHH
Confidence            488999999999999999    5789999999999999999999999999 888        888999999999999999


Q ss_pred             HHHHhcCCchHHHHHHHHHHc
Q 019816          116 HINRYGFPELEKEIKELAKAD  136 (335)
Q Consensus       116 ~~a~~~~~~~~~~i~~~l~~~  136 (335)
                      |+|+..+..   ++++.|.++
T Consensus       153 h~A~~~g~~---~iv~~Ll~~  170 (664)
T PTZ00322        153 ELAEENGFR---EVVQLLSRH  170 (664)
T ss_pred             HHHHHCCcH---HHHHHHHhC
Confidence            999987743   677777664

>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]

Probab=98.84  E-value=1.4e-09  Score=108.91  Aligned_cols=121  Identities=17%  Similarity=0.089  Sum_probs=107.8

Q ss_pred             CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccc-cCCCCCchhHHHH
Q 019816            1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFE-KDVKGNTPFHVLA   79 (335)
Q Consensus         1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~-~d~~G~TpLH~Aa   79 (335)
                      +|+|-.||..||.|.++.|+.+|+++ +.+|+.|.+||.+|+..||..+|+.|+    ...++++. .|+.+.|+|.+||
T Consensus       758 ~t~LT~acaggh~e~vellv~rgani-ehrdkkgf~plImaatagh~tvV~~ll----k~ha~veaQsdrtkdt~lSlac  832 (2131)
T KOG4369|consen  758 KTNLTSACAGGHREEVELLVVRGANI-EHRDKKGFVPLIMAATAGHITVVQDLL----KAHADVEAQSDRTKDTMLSLAC  832 (2131)
T ss_pred             cccccccccCccHHHHHHHHHhcccc-cccccccchhhhhhcccCchHHHHHHH----hhhhhhhhhcccccCceEEEec
Confidence            58899999999999999999999988 569999999999999999999999999    35566665 5889999999999


Q ss_pred             hcCCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhcCCchHHHHHHHHHHcC
Q 019816           80 AVCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPELEKEIKELAKADG  137 (335)
Q Consensus        80 ~~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~~~  137 (335)
                      ..|+.+. ++|        +..+++...+|-...||+.+|...+.   .+|+..|...|
T Consensus       833 sggr~~vvelL--------l~~gankehrnvsDytPlsla~Sggy---~~iI~~llS~G  880 (2131)
T KOG4369|consen  833 SGGRTRVVELL--------LNAGANKEHRNVSDYTPLSLARSGGY---TKIIHALLSSG  880 (2131)
T ss_pred             CCCcchHHHHH--------HHhhccccccchhhcCchhhhcCcch---HHHHHHHhhcc
Confidence            9999999 888        89999999999999999999997774   47788777655

>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]

Probab=98.83  E-value=6.8e-09  Score=90.20  Aligned_cols=85  Identities=20%  Similarity=0.153  Sum_probs=79.5

Q ss_pred             CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHh
Q 019816            1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAA   80 (335)
Q Consensus         1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~   80 (335)
                      +|||..|+.+|+.+.++.||+.++|++..++..+.||||.|+..|+.+++++|+    ..|+.....+.-|+|+-.+|+.
T Consensus        46 Ms~LahAaykGnl~~v~lll~~gaDvN~~qhg~~YTpLmFAALSGn~dvcrlll----daGa~~~~vNsvgrTAaqmAAF  121 (396)
T KOG1710|consen   46 MSVLAHAAYKGNLTLVELLLELGADVNDKQHGTLYTPLMFAALSGNQDVCRLLL----DAGARMYLVNSVGRTAAQMAAF  121 (396)
T ss_pred             ccHHHHHHhcCcHHHHHHHHHhCCCcCcccccccccHHHHHHHcCCchHHHHHH----hccCccccccchhhhHHHHHHH
Confidence            589999999999999999999999999989999999999999999999999999    6888888999999999999999


Q ss_pred             cCCCCc-ccc
Q 019816           81 VCPDPR-PYN   89 (335)
Q Consensus        81 ~g~~~~-~lL   89 (335)
                      .|+.++ ..+
T Consensus       122 VG~H~CV~iI  131 (396)
T KOG1710|consen  122 VGHHECVAII  131 (396)
T ss_pred             hcchHHHHHH
Confidence            999887 444

>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]

Probab=98.69  E-value=6e-09  Score=101.75  Aligned_cols=92  Identities=18%  Similarity=0.118  Sum_probs=79.9

Q ss_pred             HHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCC-CCchhHHHHhcCCCCc-ccccccCc
Q 019816           17 QEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVK-GNTPFHVLAAVCPDPR-PYNAGYGI   94 (335)
Q Consensus        17 ~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~-G~TpLH~Aa~~g~~~~-~lL~~~~~   94 (335)
                      .++-+.|.+..+..|..|+|+||+|+..+..++++.|+    ..|.+++.+|.+ |+||||-|...|+.++ .+|     
T Consensus        35 ~F~~k~c~n~anikD~~GR~alH~~~S~~k~~~l~wLl----qhGidv~vqD~ESG~taLHRaiyyG~idca~lL-----  105 (1267)
T KOG0783|consen   35 GFSEKSCQNLANIKDRYGRTALHIAVSENKNSFLRWLL----QHGIDVFVQDEESGYTALHRAIYYGNIDCASLL-----  105 (1267)
T ss_pred             HHHHHhhhhhhhHHHhhccceeeeeeccchhHHHHHHH----hcCceeeeccccccchHhhHhhhhchHHHHHHH-----
Confidence            34455677777788999999999999999999999999    468999999976 9999999999999999 777     


Q ss_pred             ccccccccccccccCCCCCHHHHHHh
Q 019816           95 IPYKIAKGYYQAVNKQNISVEHINRY  120 (335)
Q Consensus        95 ~~~~~~~~~~~~~n~~G~Tpl~~a~~  120 (335)
                         +.+|..+.++|++|..||+..++
T Consensus       106 ---L~~g~SL~i~Dkeglsplq~~~r  128 (1267)
T KOG0783|consen  106 ---LSKGRSLRIKDKEGLSPLQFLSR  128 (1267)
T ss_pred             ---HhcCCceEEecccCCCHHHHHhh
Confidence               78899999999999999998885

>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]

Probab=98.63  E-value=3.4e-08  Score=99.24  Aligned_cols=84  Identities=15%  Similarity=0.099  Sum_probs=70.1

Q ss_pred             chHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHhc
Q 019816            2 TALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAAV   81 (335)
Q Consensus         2 TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~~   81 (335)
                      +||.+|+.+||.+.++.|++.+.|++.....+.+|+|-+|+..|+.+++.+||    ...+++..+-+.|-|||+-++..
T Consensus       894 sPLmlatmngh~~at~~ll~~gsdiNaqIeTNrnTaltla~fqgr~evv~lLL----a~~anvehRaktgltplme~Asg  969 (2131)
T KOG4369|consen  894 SPLMLATMNGHQAATLSLLQPGSDINAQIETNRNTALTLALFQGRPEVVFLLL----AAQANVEHRAKTGLTPLMEMASG  969 (2131)
T ss_pred             chhhhhhhccccHHHHHHhcccchhccccccccccceeeccccCcchHHHHHH----HHhhhhhhhcccCCcccchhhcC
Confidence            57888888888888888888888888877788888888888888888888888    56677777888889999888888


Q ss_pred             CCCCc-ccc
Q 019816           82 CPDPR-PYN   89 (335)
Q Consensus        82 g~~~~-~lL   89 (335)
                      |..++ .+|
T Consensus       970 Gyvdvg~~l  978 (2131)
T KOG4369|consen  970 GYVDVGNLL  978 (2131)
T ss_pred             Cccccchhh
Confidence            88888 666

>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]

Probab=98.53  E-value=8.6e-08  Score=89.62  Aligned_cols=85  Identities=9%  Similarity=-0.050  Sum_probs=73.6

Q ss_pred             HHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHhcCCCCc-ccccccCcccccccccccccccCCCCCHHHHH
Q 019816           40 FAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAAVCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHIN  118 (335)
Q Consensus        40 ~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a  118 (335)
                      -|+..|..++|+..+++    -.+....+.+|-|+||-|+..||.++ ++|        +..|+|+|+.|.+|+||||+|
T Consensus       556 DaaLeGEldlVq~~i~e----v~DpSqpNdEGITaLHNAiCaghyeIVkFL--------i~~ganVNa~DSdGWTPLHCA  623 (752)
T KOG0515|consen  556 DAALEGELDLVQRIIYE----VTDPSQPNDEGITALHNAICAGHYEIVKFL--------IEFGANVNAADSDGWTPLHCA  623 (752)
T ss_pred             hhhhcchHHHHHHHHHh----hcCCCCCCccchhHHhhhhhcchhHHHHHH--------HhcCCcccCccCCCCchhhhh
Confidence            37889999999998844    34677788999999999999999999 999        899999999999999999999


Q ss_pred             HhcCCchHHHHHHHHHHcCCC
Q 019816          119 RYGFPELEKEIKELAKADGNG  139 (335)
Q Consensus       119 ~~~~~~~~~~i~~~l~~~~~~  139 (335)
                      +.++.-   .+.+.|.+.|+.
T Consensus       624 ASCNnv---~~ckqLVe~Gaa  641 (752)
T KOG0515|consen  624 ASCNNV---PMCKQLVESGAA  641 (752)
T ss_pred             hhcCch---HHHHHHHhccce
Confidence            988754   677777776665

>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]

Probab=98.53  E-value=1.6e-07  Score=87.19  Aligned_cols=91  Identities=20%  Similarity=0.111  Sum_probs=74.1

Q ss_pred             ccCCCCch------HHHHHhcCCHhHHHHHHhcCCcccccccccCC-CCCchhHHHHhcCCCCc-ccccccCcccccccc
Q 019816           30 VDDRGWNV------LHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDV-KGNTPFHVLAAVCPDPR-PYNAGYGIIPYKIAK  101 (335)
Q Consensus        30 ~d~~G~t~------Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~-~G~TpLH~Aa~~g~~~~-~lL~~~~~~~~~~~~  101 (335)
                      +|++|-+.      ||-.++.|+.+.+--|+    ..|++.|..+. .|+||||.|++.|+... ++|        .-+|
T Consensus       123 rDdD~~~~~~LsrQLhasvRt~nlet~LRll----~lGA~~N~~hpekg~TpLHvAAk~Gq~~Q~ElL--------~vYG  190 (669)
T KOG0818|consen  123 RDDDSVTAKDLSKQLHSSVRTGNLETCLRLL----SLGAQANFFHPEKGNTPLHVAAKAGQILQAELL--------AVYG  190 (669)
T ss_pred             CCcchhhHHHHHHHHHHHhhcccHHHHHHHH----HcccccCCCCcccCCchhHHHHhccchhhhhHH--------hhcc
Confidence            46665443      89999999998877677    57899998775 59999999999999887 888        7899


Q ss_pred             cccccccCCCCCHHHHHHhcCCchH-HHHHHH
Q 019816          102 GYYQAVNKQNISVEHINRYGFPELE-KEIKEL  132 (335)
Q Consensus       102 ~~~~~~n~~G~Tpl~~a~~~~~~~~-~~i~~~  132 (335)
                      +|++..|.+|.||+++|.+.|+... ..|++.
T Consensus       191 AD~~a~d~~GmtP~~~AR~~gH~~laeRl~e~  222 (669)
T KOG0818|consen  191 ADPGAQDSSGMTPVDYARQGGHHELAERLVEI  222 (669)
T ss_pred             CCCCCCCCCCCcHHHHHHhcCchHHHHHHHHH
Confidence            9999999999999999998776533 235553

>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]

Probab=98.52  E-value=1.6e-07  Score=87.14  Aligned_cols=80  Identities=18%  Similarity=0.065  Sum_probs=74.3

Q ss_pred             hHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHhcC
Q 019816            3 ALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAAVC   82 (335)
Q Consensus         3 pLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~~g   82 (335)
                      -||-.++.|+.++.-.||..|++.+..-.+.|.||||+|++.|+.--+++|+    -.|++++.+|.+|.||+.+|-..|
T Consensus       136 QLhasvRt~nlet~LRll~lGA~~N~~hpekg~TpLHvAAk~Gq~~Q~ElL~----vYGAD~~a~d~~GmtP~~~AR~~g  211 (669)
T KOG0818|consen  136 QLHSSVRTGNLETCLRLLSLGAQANFFHPEKGNTPLHVAAKAGQILQAELLA----VYGADPGAQDSSGMTPVDYARQGG  211 (669)
T ss_pred             HHHHHhhcccHHHHHHHHHcccccCCCCcccCCchhHHHHhccchhhhhHHh----hccCCCCCCCCCCCcHHHHHHhcC
Confidence            3899999999999999999999998876778999999999999998888888    689999999999999999999999


Q ss_pred             CCCc
Q 019816           83 PDPR   86 (335)
Q Consensus        83 ~~~~   86 (335)
                      |.++
T Consensus       212 H~~l  215 (669)
T KOG0818|consen  212 HHEL  215 (669)
T ss_pred             chHH
Confidence            9876

>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]

Probab=98.52  E-value=4.6e-08  Score=90.29  Aligned_cols=83  Identities=20%  Similarity=0.075  Sum_probs=71.5

Q ss_pred             hHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHhcC
Q 019816            3 ALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAAVC   82 (335)
Q Consensus         3 pLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~~g   82 (335)
                      ++.+||+.|++..++.+.-.+.|... .|.+.+|+||+|+..|+.+++++|++   ..+.+.+.+|+.|+|||.-|...+
T Consensus       509 ~~~~aa~~GD~~alrRf~l~g~D~~~-~DyD~RTaLHvAAaEG~v~v~kfl~~---~~kv~~~~kDRw~rtPlDdA~~F~  584 (622)
T KOG0506|consen  509 NVMYAAKNGDLSALRRFALQGMDLET-KDYDDRTALHVAAAEGHVEVVKFLLN---ACKVDPDPKDRWGRTPLDDAKHFK  584 (622)
T ss_pred             hhhhhhhcCCHHHHHHHHHhcccccc-cccccchhheeecccCceeHHHHHHH---HHcCCCChhhccCCCcchHhHhcC
Confidence            57889999999999988888888844 79999999999999999999999984   366788899999999999999998


Q ss_pred             CCCc-ccc
Q 019816           83 PDPR-PYN   89 (335)
Q Consensus        83 ~~~~-~lL   89 (335)
                      |.++ ++|
T Consensus       585 h~~v~k~L  592 (622)
T KOG0506|consen  585 HKEVVKLL  592 (622)
T ss_pred             cHHHHHHH
Confidence            8888 666

>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]

Probab=98.49  E-value=2e-07  Score=91.46  Aligned_cols=82  Identities=22%  Similarity=0.256  Sum_probs=73.0

Q ss_pred             CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHh
Q 019816            1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAA   80 (335)
Q Consensus         1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~   80 (335)
                      +|+||+|+..|..++++.||++|.|+..+-.+.|+||||-|..+|+.+++..|+    ..|..+..+|++|.+||..-++
T Consensus        53 R~alH~~~S~~k~~~l~wLlqhGidv~vqD~ESG~taLHRaiyyG~idca~lLL----~~g~SL~i~Dkeglsplq~~~r  128 (1267)
T KOG0783|consen   53 RTALHIAVSENKNSFLRWLLQHGIDVFVQDEESGYTALHRAIYYGNIDCASLLL----SKGRSLRIKDKEGLSPLQFLSR  128 (1267)
T ss_pred             cceeeeeeccchhHHHHHHHhcCceeeeccccccchHhhHhhhhchHHHHHHHH----hcCCceEEecccCCCHHHHHhh
Confidence            689999999999999999999999997754557999999999999999999999    6789999999999999999887


Q ss_pred             cCCCCc
Q 019816           81 VCPDPR   86 (335)
Q Consensus        81 ~g~~~~   86 (335)
                      -....+
T Consensus       129 ~~~~~i  134 (1267)
T KOG0783|consen  129 VLSSTI  134 (1267)
T ss_pred             cccccc
Confidence            444333

>PF13606 Ank_3: Ankyrin repeat

Probab=98.43  E-value=2.5e-07  Score=53.61  Aligned_cols=27  Identities=37%  Similarity=0.447  Sum_probs=23.9

Q ss_pred             CchHhHHHhcCCHHHHHHHhhhCCCcc
Q 019816            1 MTALHLAAGQGNDWIVQEIIQRCPECC   27 (335)
Q Consensus         1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~   27 (335)
                      +||||+||+.|+.|++++|+++++|++
T Consensus         3 ~T~Lh~A~~~g~~e~v~~Ll~~gadvn   29 (30)
T PF13606_consen    3 NTPLHLAASNGNIEIVKYLLEHGADVN   29 (30)
T ss_pred             CCHHHHHHHhCCHHHHHHHHHcCCCCC
Confidence            689999999999999999999988764

>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]

Probab=98.41  E-value=2e-07  Score=87.80  Aligned_cols=109  Identities=14%  Similarity=0.015  Sum_probs=82.9

Q ss_pred             HhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHhcCC
Q 019816            4 LHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAAVCP   83 (335)
Q Consensus         4 LH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~~g~   83 (335)
                      +..|+..+++--+++....|.++.. ++.+-.+-||+|+..|+.++|++++++-  ....++..|..|.|+||-|+..++
T Consensus       870 il~av~~~D~~klqE~h~~gg~ll~-~~~~~~sllh~a~~tg~~eivkyildh~--p~elld~~de~get~lhkaa~~~~  946 (1004)
T KOG0782|consen  870 ILRAVLSSDLMKLQETHLNGGSLLI-QGPDHCSLLHYAAKTGNGEIVKYILDHG--PSELLDMADETGETALHKAACQRN  946 (1004)
T ss_pred             HHHHHHhccHHHHHHHHhcCCceEe-eCcchhhHHHHHHhcCChHHHHHHHhcC--CHHHHHHHhhhhhHHHHHHHHhcc
Confidence            4567777776666666666766644 6888888888888888888888888542  235778888888888888888887


Q ss_pred             CCc-ccccccCcccccccccccccccCCCCCHHHHHHhcCC
Q 019816           84 DPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFP  123 (335)
Q Consensus        84 ~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~  123 (335)
                      ..+ ++|        .+.|+.+...|.+|.||-.-|.+.+.
T Consensus       947 r~vc~~l--------vdagasl~ktd~kg~tp~eraqqa~d  979 (1004)
T KOG0782|consen  947 RAVCQLL--------VDAGASLRKTDSKGKTPQERAQQAGD  979 (1004)
T ss_pred             hHHHHHH--------HhcchhheecccCCCChHHHHHhcCC
Confidence            777 777        78888888888888888888875543

>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]

Probab=98.39  E-value=5.5e-07  Score=84.90  Aligned_cols=85  Identities=26%  Similarity=0.303  Sum_probs=76.5

Q ss_pred             CchHhHHHhcCCHHHHHHHhhhCCC-ccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHH
Q 019816            1 MTALHLAAGQGNDWIVQEIIQRCPE-CCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLA   79 (335)
Q Consensus         1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~-~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa   79 (335)
                      +|-||+|++.|+-|+|+++|+++|. +....|+.|+|+||-|+..++..++++|+    ..|+.+...|..|.||-.-|-
T Consensus       900 ~sllh~a~~tg~~eivkyildh~p~elld~~de~get~lhkaa~~~~r~vc~~lv----dagasl~ktd~kg~tp~eraq  975 (1004)
T KOG0782|consen  900 CSLLHYAAKTGNGEIVKYILDHGPSELLDMADETGETALHKAACQRNRAVCQLLV----DAGASLRKTDSKGKTPQERAQ  975 (1004)
T ss_pred             hhHHHHHHhcCChHHHHHHHhcCCHHHHHHHhhhhhHHHHHHHHhcchHHHHHHH----hcchhheecccCCCChHHHHH
Confidence            3679999999999999999999985 45557899999999999999999999999    689999999999999999999


Q ss_pred             hcCCCCc-ccc
Q 019816           80 AVCPDPR-PYN   89 (335)
Q Consensus        80 ~~g~~~~-~lL   89 (335)
                      +.|+.+. .+|
T Consensus       976 qa~d~dlaayl  986 (1004)
T KOG0782|consen  976 QAGDPDLAAYL  986 (1004)
T ss_pred             hcCCchHHHHH
Confidence            9999887 665

>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature

Probab=98.38  E-value=3.7e-07  Score=54.20  Aligned_cols=32  Identities=28%  Similarity=0.190  Sum_probs=19.0

Q ss_pred             CCCchHHHHHhcCCHhHHHHHHhcCCcccccccccC
Q 019816           33 RGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKD   68 (335)
Q Consensus        33 ~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d   68 (335)
                      +|+||||+|+..|+.+++++|+    ..|++++.+|
T Consensus         1 dG~TpLh~A~~~~~~~~v~~Ll----~~ga~~~~~d   32 (33)
T PF00023_consen    1 DGNTPLHYAAQRGHPDIVKLLL----KHGADINARD   32 (33)
T ss_dssp             TSBBHHHHHHHTTCHHHHHHHH----HTTSCTTCBC
T ss_pred             CcccHHHHHHHHHHHHHHHHHH----HCcCCCCCCC
Confidence            3566666666666666666666    3555555554

Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....

>PF13606 Ank_3: Ankyrin repeat

Probab=98.35  E-value=4.4e-07  Score=52.53  Aligned_cols=29  Identities=24%  Similarity=0.099  Sum_probs=25.8

Q ss_pred             CCCchHHHHHhcCCHhHHHHHHhcCCccccccc
Q 019816           33 RGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIF   65 (335)
Q Consensus        33 ~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n   65 (335)
                      +|+||||+||.+|+.+++++|+    +.|+++|
T Consensus         1 ~G~T~Lh~A~~~g~~e~v~~Ll----~~gadvn   29 (30)
T PF13606_consen    1 NGNTPLHLAASNGNIEIVKYLL----EHGADVN   29 (30)
T ss_pred             CCCCHHHHHHHhCCHHHHHHHH----HcCCCCC
Confidence            5899999999999999999999    4677766

>KOG0522 consensus Ankyrin repeat protein [General function prediction only]

Probab=98.29  E-value=7.3e-07  Score=83.72  Aligned_cols=80  Identities=18%  Similarity=0.149  Sum_probs=65.1

Q ss_pred             hHhHHHhcCCHHHHHHHhh-hCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHhc
Q 019816            3 ALHLAAGQGNDWIVQEIIQ-RCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAAV   81 (335)
Q Consensus         3 pLH~Aa~~G~~e~v~~Ll~-~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~~   81 (335)
                      |||++......+-+...+. .-......+|..|+||||+|+.-|+.+.++.|+    ..++++..+|++|++|||-|+..
T Consensus        23 ~lh~~~~~~~~~sl~~el~~~~~~~id~~D~~g~TpLhlAV~Lg~~~~a~~Ll----~a~Adv~~kN~~gWs~L~EAv~~   98 (560)
T KOG0522|consen   23 PLHWAVVTTDSDSLEQELLAKVSLVIDRRDPPGRTPLHLAVRLGHVEAARILL----SAGADVSIKNNEGWSPLHEAVST   98 (560)
T ss_pred             ccchhhhccchhhHHHHHhhhhhceeccccCCCCccHHHHHHhcCHHHHHHHH----hcCCCccccccccccHHHHHHHc
Confidence            4899998887766655433 333445668899999999999999999999998    68889999999999999999998


Q ss_pred             CCCCc
Q 019816           82 CPDPR   86 (335)
Q Consensus        82 g~~~~   86 (335)
                      |+..+
T Consensus        99 g~~q~  103 (560)
T KOG0522|consen   99 GNEQI  103 (560)
T ss_pred             CCHHH
Confidence            88754

>KOG0522 consensus Ankyrin repeat protein [General function prediction only]

Probab=98.23  E-value=1e-06  Score=82.82  Aligned_cols=89  Identities=24%  Similarity=0.172  Sum_probs=70.4

Q ss_pred             chHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHhcCCCCc-ccccccCcccccccccccccccCCCCCH
Q 019816           36 NVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAAVCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISV  114 (335)
Q Consensus        36 t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tp  114 (335)
                      -|+|+++.....+-....+..  .....++.+|..|+||||+|+..|+... .+|        +..++++..+|++|++|
T Consensus        22 ~~lh~~~~~~~~~sl~~el~~--~~~~~id~~D~~g~TpLhlAV~Lg~~~~a~~L--------l~a~Adv~~kN~~gWs~   91 (560)
T KOG0522|consen   22 KPLHWAVVTTDSDSLEQELLA--KVSLVIDRRDPPGRTPLHLAVRLGHVEAARIL--------LSAGADVSIKNNEGWSP   91 (560)
T ss_pred             cccchhhhccchhhHHHHHhh--hhhceeccccCCCCccHHHHHHhcCHHHHHHH--------HhcCCCccccccccccH
Confidence            459999988876655544412  2556889999999999999999999998 888        88999999999999999


Q ss_pred             HHHHHhcCCc-hHHHHHHHHH
Q 019816          115 EHINRYGFPE-LEKEIKELAK  134 (335)
Q Consensus       115 l~~a~~~~~~-~~~~i~~~l~  134 (335)
                      ||-|+..+.+ +..++++.++
T Consensus        92 L~EAv~~g~~q~i~~vlr~~~  112 (560)
T KOG0522|consen   92 LHEAVSTGNEQIITEVLRHLK  112 (560)
T ss_pred             HHHHHHcCCHHHHHHHHHHhH
Confidence            9999976654 3445555444

>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]

Probab=98.22  E-value=9.1e-07  Score=81.91  Aligned_cols=93  Identities=15%  Similarity=0.022  Sum_probs=76.7

Q ss_pred             cCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHhcCCCCc-ccccccCcccccccccccccccC
Q 019816           31 DDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAAVCPDPR-PYNAGYGIIPYKIAKGYYQAVNK  109 (335)
Q Consensus        31 d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~  109 (335)
                      +.++...+.+|+..|....++-+.    -.+.+++.+|.+.+|+||.|+..|+..+ ++|.       ...+++++.+|.
T Consensus       503 ~~~~~i~~~~aa~~GD~~alrRf~----l~g~D~~~~DyD~RTaLHvAAaEG~v~v~kfl~-------~~~kv~~~~kDR  571 (622)
T KOG0506|consen  503 ENDTVINVMYAAKNGDLSALRRFA----LQGMDLETKDYDDRTALHVAAAEGHVEVVKFLL-------NACKVDPDPKDR  571 (622)
T ss_pred             cccchhhhhhhhhcCCHHHHHHHH----HhcccccccccccchhheeecccCceeHHHHHH-------HHHcCCCChhhc
Confidence            345667899999999998887665    4789999999999999999999999998 6651       556899999999


Q ss_pred             CCCCHHHHHHhcCCchHHHHHHHHHHcC
Q 019816          110 QNISVEHINRYGFPELEKEIKELAKADG  137 (335)
Q Consensus       110 ~G~Tpl~~a~~~~~~~~~~i~~~l~~~~  137 (335)
                      .|+||||-|...++.   +..++|.++.
T Consensus       572 w~rtPlDdA~~F~h~---~v~k~L~~~~  596 (622)
T KOG0506|consen  572 WGRTPLDDAKHFKHK---EVVKLLEEAQ  596 (622)
T ss_pred             cCCCcchHhHhcCcH---HHHHHHHHHh
Confidence            999999999987744   5666666543

>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature

Probab=98.21  E-value=1.8e-06  Score=51.23  Aligned_cols=28  Identities=29%  Similarity=0.355  Sum_probs=26.2

Q ss_pred             CchHhHHHhcCCHHHHHHHhhhCCCccc
Q 019816            1 MTALHLAAGQGNDWIVQEIIQRCPECCE   28 (335)
Q Consensus         1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~   28 (335)
                      +||||+|+++|+.++++.|+++++++..
T Consensus         3 ~TpLh~A~~~~~~~~v~~Ll~~ga~~~~   30 (33)
T PF00023_consen    3 NTPLHYAAQRGHPDIVKLLLKHGADINA   30 (33)
T ss_dssp             BBHHHHHHHTTCHHHHHHHHHTTSCTTC
T ss_pred             ccHHHHHHHHHHHHHHHHHHHCcCCCCC
Confidence            5999999999999999999999998865

Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....

>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]

Probab=98.10  E-value=2.5e-06  Score=80.74  Aligned_cols=82  Identities=12%  Similarity=0.018  Sum_probs=61.2

Q ss_pred             HhHHHhcCCHHHHHHHhhhCCCc---cccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHh
Q 019816            4 LHLAAGQGNDWIVQEIIQRCPEC---CELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAA   80 (335)
Q Consensus         4 LH~Aa~~G~~e~v~~Ll~~~~~~---~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~   80 (335)
                      |.-|....++..+-.||.++...   ....+.+|+|+||+||..|+..+.++|+    +.+.++..+|.+|+|+|.||-+
T Consensus       628 Ll~A~~~~Dl~t~~lLLAhg~~~e~~~t~~~~~grt~LHLa~~~gnVvl~QLLi----Wyg~dv~~rda~g~t~l~yar~  703 (749)
T KOG0705|consen  628 LLRAVAAEDLQTAILLLAHGSREEVNETCGEGDGRTALHLAARKGNVVLAQLLI----WYGVDVMARDAHGRTALFYARQ  703 (749)
T ss_pred             HHHHHHHHHHHHHHHHHhccCchhhhccccCCCCcchhhhhhhhcchhHHHHHH----HhCccceecccCCchhhhhHhh
Confidence            34566666777777777776432   2334567788888888888888888888    5788888888888888888888


Q ss_pred             cCCCCc-ccc
Q 019816           81 VCPDPR-PYN   89 (335)
Q Consensus        81 ~g~~~~-~lL   89 (335)
                      .|..++ ..|
T Consensus       704 a~sqec~d~l  713 (749)
T KOG0705|consen  704 AGSQECIDVL  713 (749)
T ss_pred             cccHHHHHHH
Confidence            888877 555

>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]

Probab=97.88  E-value=1.5e-05  Score=80.93  Aligned_cols=90  Identities=18%  Similarity=0.043  Sum_probs=76.4

Q ss_pred             CCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHhcCCCCc-ccccccCcccccccccccccccCC
Q 019816           32 DRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAAVCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQ  110 (335)
Q Consensus        32 ~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~  110 (335)
                      ..|.|+||.|+..+....+++|+    ..++++|..|..|+||||.+...|+... .++        +.++++.++.|.+
T Consensus       654 ~~~~s~lh~a~~~~~~~~~e~ll----~~ga~vn~~d~~g~~plh~~~~~g~~~~~~~l--------l~~~a~~~a~~~~  721 (785)
T KOG0521|consen  654 CIGCSLLHVAVGTGDSGAVELLL----QNGADVNALDSKGRTPLHHATASGHTSIACLL--------LKRGADPNAFDPD  721 (785)
T ss_pred             hcccchhhhhhccchHHHHHHHH----hcCCcchhhhccCCCcchhhhhhcccchhhhh--------ccccccccccCcc
Confidence            45789999999999999999999    6789999999999999999999999998 666        7799999999999


Q ss_pred             CCCHHHHHHhcCCchHHHHHHHHH
Q 019816          111 NISVEHINRYGFPELEKEIKELAK  134 (335)
Q Consensus       111 G~Tpl~~a~~~~~~~~~~i~~~l~  134 (335)
                      |.+|+++|... ...-..++..+.
T Consensus       722 ~~~~l~~a~~~-~~~d~~~l~~l~  744 (785)
T KOG0521|consen  722 GKLPLDIAMEA-ANADIVLLLRLA  744 (785)
T ss_pred             CcchhhHHhhh-ccccHHHHHhhh
Confidence            99999999866 332334444333

>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]

Probab=97.83  E-value=1.6e-05  Score=80.61  Aligned_cols=81  Identities=23%  Similarity=0.236  Sum_probs=74.2

Q ss_pred             CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHh
Q 019816            1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAA   80 (335)
Q Consensus         1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~   80 (335)
                      .|+||.|+..|..-.++.|++.+++++. .|..|+||+|.+...|+...+..++    ..+++.+.-|.+|.+||++|..
T Consensus       657 ~s~lh~a~~~~~~~~~e~ll~~ga~vn~-~d~~g~~plh~~~~~g~~~~~~~ll----~~~a~~~a~~~~~~~~l~~a~~  731 (785)
T KOG0521|consen  657 CSLLHVAVGTGDSGAVELLLQNGADVNA-LDSKGRTPLHHATASGHTSIACLLL----KRGADPNAFDPDGKLPLDIAME  731 (785)
T ss_pred             cchhhhhhccchHHHHHHHHhcCCcchh-hhccCCCcchhhhhhcccchhhhhc----cccccccccCccCcchhhHHhh
Confidence            4799999999999999999999999755 8999999999999999999888888    5889999999999999999988


Q ss_pred             cCCCCc
Q 019816           81 VCPDPR   86 (335)
Q Consensus        81 ~g~~~~   86 (335)
                      ..+.+.
T Consensus       732 ~~~~d~  737 (785)
T KOG0521|consen  732 AANADI  737 (785)
T ss_pred             hccccH
Confidence            866666

>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]

Probab=97.82  E-value=2.3e-05  Score=74.48  Aligned_cols=90  Identities=14%  Similarity=-0.078  Sum_probs=65.2

Q ss_pred             HHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHhcCCCCc-ccccccCcccccccccccccccCCCCCHHH
Q 019816           38 LHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAAVCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEH  116 (335)
Q Consensus        38 Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~  116 (335)
                      |.-|+.......+.+|+.+-.....+-..-+.+|+|+||+||..|+... ++|        .-+|+|+.++|.+|+|||.
T Consensus       628 Ll~A~~~~Dl~t~~lLLAhg~~~e~~~t~~~~~grt~LHLa~~~gnVvl~QLL--------iWyg~dv~~rda~g~t~l~  699 (749)
T KOG0705|consen  628 LLRAVAAEDLQTAILLLAHGSREEVNETCGEGDGRTALHLAARKGNVVLAQLL--------IWYGVDVMARDAHGRTALF  699 (749)
T ss_pred             HHHHHHHHHHHHHHHHHhccCchhhhccccCCCCcchhhhhhhhcchhHHHHH--------HHhCccceecccCCchhhh
Confidence            4445555555555556522111112223456788999999999999998 998        7789999999999999999


Q ss_pred             HHHhcCCchHHHHHHHHHHcCC
Q 019816          117 INRYGFPELEKEIKELAKADGN  138 (335)
Q Consensus       117 ~a~~~~~~~~~~i~~~l~~~~~  138 (335)
                      +|.+.+..   +-++.|..+|.
T Consensus       700 yar~a~sq---ec~d~llq~gc  718 (749)
T KOG0705|consen  700 YARQAGSQ---ECIDVLLQYGC  718 (749)
T ss_pred             hHhhcccH---HHHHHHHHcCC
Confidence            99998865   66676776554

>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]

Probab=97.71  E-value=1.7e-05  Score=80.36  Aligned_cols=115  Identities=19%  Similarity=0.150  Sum_probs=82.1

Q ss_pred             CchHhHHHhcCCHHHHHHHhhh-CCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHH
Q 019816            1 MTALHLAAGQGNDWIVQEIIQR-CPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLA   79 (335)
Q Consensus         1 ~TpLH~Aa~~G~~e~v~~Ll~~-~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa   79 (335)
                      +|-+|+++..++.-+++.+++. +..... .|.+|...+|. |..++.+...+++.   ..+..++.+|..|+||||+|+
T Consensus       575 ~lllhL~a~~lyawLie~~~e~~~~~~~e-ld~d~qgV~hf-ca~lg~ewA~ll~~---~~~~ai~i~D~~G~tpL~wAa  649 (975)
T KOG0520|consen  575 MLLLHLLAELLYAWLIEKVIEWAGSGDLE-LDRDGQGVIHF-CAALGYEWAFLPIS---ADGVAIDIRDRNGWTPLHWAA  649 (975)
T ss_pred             hHHHHHHHHHhHHHHHHHHhcccccCchh-hcccCCChhhH-hhhcCCceeEEEEe---ecccccccccCCCCcccchHh
Confidence            4678999999999999999986 444433 68888889999 44555555545542   477899999999999999999


Q ss_pred             hcCCCCc-ccccccCccccccccc--ccccccCCCCCHHHHHHhcCCc
Q 019816           80 AVCPDPR-PYNAGYGIIPYKIAKG--YYQAVNKQNISVEHINRYGFPE  124 (335)
Q Consensus        80 ~~g~~~~-~lL~~~~~~~~~~~~~--~~~~~n~~G~Tpl~~a~~~~~~  124 (335)
                      .+|+..+ .-|.--+    ...+.  |+...+-.|.|+-++|..++.+
T Consensus       650 ~~G~e~l~a~l~~lg----a~~~~~tdps~~~p~g~ta~~la~s~g~~  693 (975)
T KOG0520|consen  650 FRGREKLVASLIELG----ADPGAVTDPSPETPGGKTAADLARANGHK  693 (975)
T ss_pred             hcCHHHHHHHHHHhc----cccccccCCCCCCCCCCchhhhhhccccc
Confidence            9999887 3330000    12222  2334455699999999977755

>KOG0511 consensus Ankyrin repeat protein [General function prediction only]

Probab=97.39  E-value=0.00038  Score=63.28  Aligned_cols=66  Identities=18%  Similarity=0.091  Sum_probs=56.9

Q ss_pred             HhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCch
Q 019816            4 LHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTP   74 (335)
Q Consensus         4 LH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~Tp   74 (335)
                      |..||+.|+.+.|+.|++.|-+++. +|....+||.+|+..||.+++++|+    .+|+....-.-+|.-.
T Consensus        40 lceacR~GD~d~v~~LVetgvnVN~-vD~fD~spL~lAsLcGHe~vvklLL----enGAiC~rdtf~G~RC  105 (516)
T KOG0511|consen   40 LCEACRAGDVDRVRYLVETGVNVNA-VDRFDSSPLYLASLCGHEDVVKLLL----ENGAICSRDTFDGDRC  105 (516)
T ss_pred             HHHHhhcccHHHHHHHHHhCCCcch-hhcccccHHHHHHHcCcHHHHHHHH----HcCCcccccccCcchh
Confidence            6789999999999999999988866 8999999999999999999999999    5677666555556554

>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]

Probab=97.15  E-value=0.00061  Score=69.40  Aligned_cols=93  Identities=13%  Similarity=-0.016  Sum_probs=74.0

Q ss_pred             ccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHhcCCCCc--ccccccCcccccccccccc
Q 019816           28 ELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAAVCPDPR--PYNAGYGIIPYKIAKGYYQ  105 (335)
Q Consensus        28 ~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~~g~~~~--~lL~~~~~~~~~~~~~~~~  105 (335)
                      ......|++.+|+++..+....++.++++   .+...+..|.+|...+|+++. ++.+.  .+.        .-.+..++
T Consensus       568 ~~~~~r~~lllhL~a~~lyawLie~~~e~---~~~~~~eld~d~qgV~hfca~-lg~ewA~ll~--------~~~~~ai~  635 (975)
T KOG0520|consen  568 SSVNFRDMLLLHLLAELLYAWLIEKVIEW---AGSGDLELDRDGQGVIHFCAA-LGYEWAFLPI--------SADGVAID  635 (975)
T ss_pred             ccCCCcchHHHHHHHHHhHHHHHHHHhcc---cccCchhhcccCCChhhHhhh-cCCceeEEEE--------eecccccc
Confidence            33567899999999999999999988843   366777889999999999555 44444  444        56789999


Q ss_pred             cccCCCCCHHHHHHhcCCchHHHHHHHHHH
Q 019816          106 AVNKQNISVEHINRYGFPELEKEIKELAKA  135 (335)
Q Consensus       106 ~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~  135 (335)
                      .+|..|+||||+|...|.+   .++..|.+
T Consensus       636 i~D~~G~tpL~wAa~~G~e---~l~a~l~~  662 (975)
T KOG0520|consen  636 IRDRNGWTPLHWAAFRGRE---KLVASLIE  662 (975)
T ss_pred             cccCCCCcccchHhhcCHH---HHHHHHHH
Confidence            9999999999999999855   66666665

>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]

Probab=97.00  E-value=0.00093  Score=55.31  Aligned_cols=64  Identities=11%  Similarity=0.081  Sum_probs=52.3

Q ss_pred             cccccccCCCCCchhHHHHhcCCCCc-ccccccCcccccccc-cccccccCCCCCHHHHHHhcCCchHHHHHHHHHH
Q 019816           61 KNLIFEKDVKGNTPFHVLAAVCPDPR-PYNAGYGIIPYKIAK-GYYQAVNKQNISVEHINRYGFPELEKEIKELAKA  135 (335)
Q Consensus        61 ~~~~n~~d~~G~TpLH~Aa~~g~~~~-~lL~~~~~~~~~~~~-~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~  135 (335)
                      +.++|.+|..|+|||+.|+..|+.+. .+|        +.+| +++...|..|.++..+|.+.+..   +.+..|.+
T Consensus         2 e~~in~rD~fgWTalmcaa~eg~~eavsyl--------lgrg~a~vgv~d~ssldaaqlaek~g~~---~fvh~lfe   67 (223)
T KOG2384|consen    2 EGNINARDAFGWTALMCAAMEGSNEAVSYL--------LGRGVAFVGVTDESSLDAAQLAEKGGAQ---AFVHSLFE   67 (223)
T ss_pred             CCCccchhhhcchHHHHHhhhcchhHHHHH--------hccCcccccccccccchHHHHHHhcChH---HHHHHHHH
Confidence            35789999999999999999999888 777        7777 88999999999999999988754   44444444

>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]

Probab=96.82  E-value=0.0025  Score=52.88  Aligned_cols=55  Identities=20%  Similarity=0.192  Sum_probs=48.0

Q ss_pred             CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHh
Q 019816            1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLN   55 (335)
Q Consensus         1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~   55 (335)
                      ||||+.||..|..+.+.+|++++.......|..|.+++.+|-+.|+.+++..|.+
T Consensus        13 WTalmcaa~eg~~eavsyllgrg~a~vgv~d~ssldaaqlaek~g~~~fvh~lfe   67 (223)
T KOG2384|consen   13 WTALMCAAMEGSNEAVSYLLGRGVAFVGVTDESSLDAAQLAEKGGAQAFVHSLFE   67 (223)
T ss_pred             chHHHHHhhhcchhHHHHHhccCcccccccccccchHHHHHHhcChHHHHHHHHH
Confidence            7999999999999999999999944335589999999999999999999988874

>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]

Probab=96.32  E-value=0.0074  Score=60.54  Aligned_cols=121  Identities=17%  Similarity=0.015  Sum_probs=82.1

Q ss_pred             hHHHhcCCHHHHHHHhhhCCC---ccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHhc
Q 019816            5 HLAAGQGNDWIVQEIIQRCPE---CCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAAV   81 (335)
Q Consensus         5 H~Aa~~G~~e~v~~Ll~~~~~---~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~~   81 (335)
                      ..|+.+|+...|+..++....   -.+.+|.-|+++||.|..+.+.++.++|++    .+...       ..+|-+|...
T Consensus        30 L~a~E~gd~~~V~k~l~~~~~~~lninc~d~lGr~al~iai~nenle~~eLLl~----~~~~~-------gdALL~aI~~   98 (822)
T KOG3609|consen   30 LLAHENGDVPLVAKALEYKAVSKLNINCRDPLGRLALHIAIDNENLELQELLLD----TSSEE-------GDALLLAIAV   98 (822)
T ss_pred             HHHHHcCChHHHHHHHHhccccccchhccChHhhhceecccccccHHHHHHHhc----Ccccc-------chHHHHHHHH
Confidence            479999999999999987654   134578889999999999999999999992    21111       3467788888


Q ss_pred             CCCCc-ccccccC-cccccc-cccccccccCCCCCHHHHHHhcCCchHHHHHHHHHHcCCC
Q 019816           82 CPDPR-PYNAGYG-IIPYKI-AKGYYQAVNKQNISVEHINRYGFPELEKEIKELAKADGNG  139 (335)
Q Consensus        82 g~~~~-~lL~~~~-~~~~~~-~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~~~~~  139 (335)
                      |..+. +++.... ..+... .+......-..+.||+.+|+..++-   ||++.|.+.|+.
T Consensus        99 ~~v~~VE~ll~~~~~~~~~~~~~d~~~~~ft~ditPliLAAh~Nny---Eil~~Ll~kg~~  156 (822)
T KOG3609|consen   99 GSVPLVELLLVHFVDAPYLERSGDANSPHFTPDITPLMLAAHLNNF---EILQCLLTRGHC  156 (822)
T ss_pred             HHHHHHHHHHhcccccchhccccccCcccCCCCccHHHHHHHhcch---HHHHHHHHcCCC
Confidence            88777 5542111 000011 1112223445688999999966543   889988875544

>smart00248 ANK ankyrin repeats

Probab=96.29  E-value=0.0062  Score=33.19  Aligned_cols=26  Identities=35%  Similarity=0.465  Sum_probs=21.6

Q ss_pred             CchHhHHHhcCCHHHHHHHhhhCCCc
Q 019816            1 MTALHLAAGQGNDWIVQEIIQRCPEC   26 (335)
Q Consensus         1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~   26 (335)
                      .||+|+|+..|+.++++.|++.+.++
T Consensus         3 ~~~l~~~~~~~~~~~~~~ll~~~~~~   28 (30)
T smart00248        3 RTPLHLAAENGNLEVVKLLLDKGADI   28 (30)
T ss_pred             CCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence            47899999999999999888887654

Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.

>KOG0511 consensus Ankyrin repeat protein [General function prediction only]

Probab=95.75  E-value=0.0081  Score=54.91  Aligned_cols=49  Identities=12%  Similarity=-0.019  Sum_probs=46.1

Q ss_pred             hHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHhcCCCCc-ccc
Q 019816           37 VLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAAVCPDPR-PYN   89 (335)
Q Consensus        37 ~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~~g~~~~-~lL   89 (335)
                      -|..||+.|..+.++.|+    ..|.++|..|+..++||.+|+..||.+. ++|
T Consensus        39 elceacR~GD~d~v~~LV----etgvnVN~vD~fD~spL~lAsLcGHe~vvklL   88 (516)
T KOG0511|consen   39 ELCEACRAGDVDRVRYLV----ETGVNVNAVDRFDSSPLYLASLCGHEDVVKLL   88 (516)
T ss_pred             HHHHHhhcccHHHHHHHH----HhCCCcchhhcccccHHHHHHHcCcHHHHHHH
Confidence            488899999999999999    5889999999999999999999999999 887

>KOG2505 consensus Ankyrin repeat protein [General function prediction only]

Probab=95.31  E-value=0.012  Score=55.60  Aligned_cols=63  Identities=19%  Similarity=0.056  Sum_probs=51.2

Q ss_pred             HHHHHHHhhhCCCcccc-----ccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHH
Q 019816           13 DWIVQEIIQRCPECCEL-----VDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLA   79 (335)
Q Consensus        13 ~e~v~~Ll~~~~~~~~~-----~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa   79 (335)
                      ...+++|.+++.+.+..     .|..--|+||+|+..|..+++.++|    ..+++...+|..|.||..++.
T Consensus       404 p~~ie~lken~lsgnf~~~pe~~~~ltsT~LH~aa~qg~~k~v~~~L----eeg~Dp~~kd~~Grtpy~ls~  471 (591)
T KOG2505|consen  404 PDSIEALKENLLSGNFDVTPEANDYLTSTFLHYAAAQGARKCVKYFL----EEGCDPSTKDGAGRTPYSLSA  471 (591)
T ss_pred             hhHHHHHHhcCCcccccccccccccccchHHHHHHhcchHHHHHHHH----HhcCCchhcccCCCCcccccc
Confidence            56677888776665432     3445789999999999999999999    567999999999999999987

>smart00248 ANK ankyrin repeats

Probab=95.27  E-value=0.025  Score=30.58  Aligned_cols=22  Identities=32%  Similarity=0.296  Sum_probs=20.4

Q ss_pred             CCCchHHHHHhcCCHhHHHHHH
Q 019816           33 RGWNVLHFAMVSFDKSDLKHLL   54 (335)
Q Consensus        33 ~G~t~Lh~A~~~g~~~~v~~Ll   54 (335)
                      +|.||+|+|+..++.++++.|+
T Consensus         1 ~~~~~l~~~~~~~~~~~~~~ll   22 (30)
T smart00248        1 DGRTPLHLAAENGNLEVVKLLL   22 (30)
T ss_pred             CCCCHHHHHHHcCCHHHHHHHH
Confidence            4789999999999999999999

Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.

>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]

Probab=94.87  E-value=0.023  Score=57.19  Aligned_cols=81  Identities=16%  Similarity=0.028  Sum_probs=60.6

Q ss_pred             CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCccc---c--ccc-ccCCCCCch
Q 019816            1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVK---N--LIF-EKDVKGNTP   74 (335)
Q Consensus         1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~---~--~~n-~~d~~G~Tp   74 (335)
                      +++||+|..+.+.|+++.|+++.-+.        ..+|.+|+..|..+.|+.++.+-...+   .  +.+ ..-..+-||
T Consensus        63 r~al~iai~nenle~~eLLl~~~~~~--------gdALL~aI~~~~v~~VE~ll~~~~~~~~~~~~~d~~~~~ft~ditP  134 (822)
T KOG3609|consen   63 RLALHIAIDNENLELQELLLDTSSEE--------GDALLLAIAVGSVPLVELLLVHFVDAPYLERSGDANSPHFTPDITP  134 (822)
T ss_pred             hhceecccccccHHHHHHHhcCcccc--------chHHHHHHHHHHHHHHHHHHhcccccchhccccccCcccCCCCccH
Confidence            47899999999999999999877433        347999999999999999994311110   0  011 112357899


Q ss_pred             hHHHHhcCCCCc-ccc
Q 019816           75 FHVLAAVCPDPR-PYN   89 (335)
Q Consensus        75 LH~Aa~~g~~~~-~lL   89 (335)
                      |.+||..++.++ ++|
T Consensus       135 liLAAh~NnyEil~~L  150 (822)
T KOG3609|consen  135 LMLAAHLNNFEILQCL  150 (822)
T ss_pred             HHHHHHhcchHHHHHH
Confidence            999999999999 666

>KOG2505 consensus Ankyrin repeat protein [General function prediction only]

Probab=94.56  E-value=0.039  Score=52.29  Aligned_cols=66  Identities=9%  Similarity=-0.067  Sum_probs=47.3

Q ss_pred             HhHHHHHHhcCCc--ccccccccCCCCCchhHHHHhcCCCCc--ccccccCcccccccccccccccCCCCCHHHHHHhc
Q 019816           47 KSDLKHLLNEYPV--VKNLIFEKDVKGNTPFHVLAAVCPDPR--PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYG  121 (335)
Q Consensus        47 ~~~v~~Ll~~~~~--~~~~~n~~d~~G~TpLH~Aa~~g~~~~--~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~  121 (335)
                      +..+++|.+....  ...-....|.---|+||+|+..|...+  .+|        . .++|+..+|..|.||.+++...
T Consensus       404 p~~ie~lken~lsgnf~~~pe~~~~ltsT~LH~aa~qg~~k~v~~~L--------e-eg~Dp~~kd~~Grtpy~ls~nk  473 (591)
T KOG2505|consen  404 PDSIEALKENLLSGNFDVTPEANDYLTSTFLHYAAAQGARKCVKYFL--------E-EGCDPSTKDGAGRTPYSLSANK  473 (591)
T ss_pred             hhHHHHHHhcCCcccccccccccccccchHHHHHHhcchHHHHHHHH--------H-hcCCchhcccCCCCcccccccH
Confidence            4456666632211  112223445567899999999999988  788        4 4599999999999999999964

>PF15038 Jiraiya: Jiraiya

Probab=86.93  E-value=16  Score=30.24  Aligned_cols=66  Identities=23%  Similarity=0.317  Sum_probs=39.8

Q ss_pred             hhhHHHHHHHHHHHhhccCCCcccCCCCCCCCCce-ecc-cCc---ccchhHhhhhhHHHHHHHHHHHHHHH
Q 019816          184 HLVVAALIATVTFAAAFTLPGGYKSETEDGANRGT-AIL-SKN---AAFQAFVISDAIAMVLSLSAVFVHFI  250 (335)
Q Consensus       184 llVVA~LiATvtf~a~~~~Pgg~~~~~~~~~~~g~-~~~-~~~---~~f~~F~~~n~~af~~S~~~i~~~~~  250 (335)
                      +.++|+++|-...+--|++.-|..+.. +++..|. +-+ .+.   .-+.+=...++++...++..+++.-+
T Consensus         7 l~i~Sal~A~Lsl~llfql~~~~~~~~-~~~~~~~~~~l~~~~~~~vl~~v~~aL~al~l~Lnl~c~lvcaL   77 (175)
T PF15038_consen    7 LCIVSALFALLSLILLFQLQPGRAEPR-SSPTDGDGSGLIPPEAAAVLYPVAAALCALALVLNLCCLLVCAL   77 (175)
T ss_pred             HHHHHHHHHHHHHHHHHhCCccccccC-CCCCccccccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            458899999999999999988776522 2222222 111 111   11444455677777777777666433

>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions

Probab=80.91  E-value=32  Score=33.63  Aligned_cols=30  Identities=17%  Similarity=0.220  Sum_probs=13.9

Q ss_pred             hhhhHHHHHHHHHHHHHHHhhhhhhHHHHHHH
Q 019816          232 ISDAIAMVLSLSAVFVHFILSLKFFKKFIFLF  263 (335)
Q Consensus       232 ~~n~~af~~S~~~i~~~~~~~~~~~~~~~~~l  263 (335)
                      +.++++....  +++.-+++...+....++.+
T Consensus        74 ~~~sis~l~~--all~P~lGa~aD~~~~Rk~~  103 (477)
T PF11700_consen   74 YANSISGLLQ--ALLAPFLGAIADYGGRRKRF  103 (477)
T ss_pred             HHHHHHHHHH--HHHHHHHHHHHcccccchHH
Confidence            4555555443  33333355666555444433

Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.

>PF01544 CorA: CorA-like Mg2+ transporter protein; InterPro: IPR002523 The CorA transport system is the primary Mg2+ influx system of Salmonella typhimurium and Escherichia coli [, ]

Probab=80.83  E-value=2.7  Score=37.76  Aligned_cols=22  Identities=27%  Similarity=0.538  Sum_probs=18.7

Q ss_pred             HHHHHHHHHHHHHHHHHhhhHH
Q 019816          267 LSFTLVAMAAMIVAFVTGTYAM  288 (335)
Q Consensus       267 ~~~~~~s~~~m~~af~~~~~~~  288 (335)
                      ..++++++++|.++|++|+|-+
T Consensus       235 ~~LT~~t~iflPlt~i~g~fGM  256 (292)
T PF01544_consen  235 KVLTIVTAIFLPLTFITGIFGM  256 (292)
T ss_dssp             HHHHHHHHHHHHHHHHTTSTTS
T ss_pred             HHHHHHHHHHHHHHHHHHHhhC
Confidence            3577888888999999999976

CorA is virtually ubiquitous in the Bacteria and Archaea. There are also eukaryotic relatives of this protein. Transporter ZntB mediates efflux of zinc ions [].; GO: 0046873 metal ion transmembrane transporter activity, 0030001 metal ion transport, 0055085 transmembrane transport, 0016020 membrane; PDB: 2HN1_A 3NWI_D 3NVO_B 3CK6_A 2IUB_E 2BBJ_E 2HN2_A 2BBH_A.

>PF14126 DUF4293: Domain of unknown function (DUF4293)

Probab=80.10  E-value=30  Score=28.01  Aligned_cols=13  Identities=31%  Similarity=0.465  Sum_probs=7.1

Q ss_pred             hhhHHHHHHHHHH
Q 019816          184 HLVVAALIATVTF  196 (335)
Q Consensus       184 llVVA~LiATvtf  196 (335)
                      .++.|++++.+++
T Consensus         8 yLlla~i~~~~~l   20 (149)
T PF14126_consen    8 YLLLAAILMGVLL   20 (149)
T ss_pred             HHHHHHHHHHHHH
Confidence            3555555555554

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	335
3jxi_A	260	Vanilloid receptor-related osmotically activated p	5e-07
3jxi_A	260	Vanilloid receptor-related osmotically activated p	7e-06
2etb_A	256	Transient receptor potential cation channel subfam	6e-07
1sw6_A	327	Regulatory protein SWI6; transcription regulation,	2e-06
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	3e-06
3v30_A	172	DNA-binding protein rfxank; structural genomics co	9e-06
2pnn_A	273	Transient receptor potential cation channel subfa	1e-05
2pnn_A	273	Transient receptor potential cation channel subfa	6e-04
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	5e-05
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	5e-05
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	5e-05
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	7e-05
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	4e-04
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	8e-05
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	1e-04
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	1e-04
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	3e-04
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	3e-04
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	4e-04
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	2e-04
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	2e-04
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	2e-04
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	7e-04
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	3e-04
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	4e-04
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	6e-04
3hra_A	201	Ankyrin repeat family protein; structural protein;	9e-04

>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A Length = 260

 Score = 49.4 bits (118), Expect = 5e-07
 Identities = 23/135 (17%), Positives = 44/135 (32%), Gaps = 15/135 (11%)

Query: 1   MTALHLAAGQGNDWIVQEIIQR-------------CPECCELVDDRGWNVLHFAMVSFDK 47
            TALH+A  +     V+ ++++              P+        G   L  A  +   
Sbjct: 94  QTALHIAIERRCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQP 153

Query: 48  SDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAAVCPDPRPYNAGYGIIPYKIAKGYYQAV 107
             + +L        + +  +D +GNT  H L A+  + R  N  +    Y +       +
Sbjct: 154 HIVHYLTENGHKQAD-LRRQDSRGNTVLHALVAIADNTRE-NTKFVTKMYDLLLIKCAKL 211

Query: 108 NKQNISVEHINRYGF 122
                    +N  G 
Sbjct: 212 FPDTNLEALLNNDGL 226

>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A Length = 260

 Score = 45.9 bits (109), Expect = 7e-06
 Identities = 22/93 (23%), Positives = 32/93 (34%), Gaps = 15/93 (16%)

Query: 2   TALHLAAGQGNDWIVQEIIQRCPECCEL--VDDRGWNVLHFAMVSFDKS--------DLK 51
             L LAA      IV  + +   +  +L   D RG  VLH  +   D +         + 
Sbjct: 142 LPLSLAACTNQPHIVHYLTENGHKQADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMY 201

Query: 52  HLLNEY----PVVKNLIFEKDVKGNTPFHVLAA 80
            LL           NL    +  G +P   +AA
Sbjct: 202 DLLLIKCAKLFPDTNLEALLNNDGLSPLM-MAA 233

>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A Length = 256

 Score = 49.0 bits (117), Expect = 6e-07
 Identities = 21/94 (22%), Positives = 31/94 (32%), Gaps = 15/94 (15%)

Query: 1   MTALHLAAGQGNDWIVQEIIQRCPECCEL--VDDRGWNVLHFAMVSFDKSDLKHLL---- 54
              L LAA      +V  +++   +   L   D  G  VLH  ++  D S     L    
Sbjct: 137 ELPLSLAACTKQWDVVTYLLENPHQPASLEATDSLGNTVLHALVMIADNSPENSALVIHM 196

Query: 55  --NEYPVVKNLIF------EKDVKGNTPFHVLAA 80
                 +   L          + +G TP   LAA
Sbjct: 197 YDGLLQMGARLCPTVQLEEISNHQGLTPLK-LAA 229

>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1 Length = 327

 Score = 48.1 bits (114), Expect = 2e-06
 Identities = 15/82 (18%), Positives = 30/82 (36%), Gaps = 7/82 (8%)

Query: 2   TALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMV---SFDKSDLKHLLNEYP 58
           T LH      N  +V+ +++         D+ G + L  A+    ++D    + LL+   
Sbjct: 133 TPLHWLTSIANLELVKHLVKHGSNRLY-GDNMGESCLVKAVKSVNNYDSGTFEALLDYL- 190

Query: 59  VVKNLIFEKDVKGNTPFHVLAA 80
                +  +D    T  H +  
Sbjct: 191 --YPCLILEDSMNRTILHHIII 210

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis} Length = 186

 Score = 46.2 bits (110), Expect = 3e-06
 Identities = 12/97 (12%), Positives = 26/97 (26%), Gaps = 27/97 (27%)

Query: 1   MTALHLAAGQGNDWIVQEIIQRCPECCEL----------VDDRGWNVLHFAMVSFDKSDL 50
            T        G + I         E C++          +      V+   + ++   + 
Sbjct: 76  TTLFFPLFQGGGNDITGTT-----ELCKIFLEKGADITALYKPYKIVVFKNIFNYFVDEN 130

Query: 51  KHLLNEYPVVKNLIFE-------KDVKGNTPFHVLAA 80
           + +    P+ K +  +       KD  G T       
Sbjct: 131 EMI----PLYKLIFSQSGLQLLIKDKWGLTALE-FVK 162

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A Length = 172

 Score = 44.3 bits (106), Expect = 9e-06
 Identities = 15/86 (17%), Positives = 31/86 (36%), Gaps = 17/86 (19%)

Query: 1  MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVV 60
            ++H  A QG    ++E +++        D+RG+  L +A      S    +      V
Sbjct: 3  SLSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWA------SAFGEI----ETV 52

Query: 61 KNLIF------EKDVKGNTPFHVLAA 80
          + L+           +  +    LA+
Sbjct: 53 RFLLEWGADPHILAKERESALS-LAS 77

>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A* Length = 273

 Score = 45.2 bits (107), Expect = 1e-05
 Identities = 26/135 (19%), Positives = 40/135 (29%), Gaps = 15/135 (11%)

Query: 1   MTALHLAAGQGNDWIVQEIIQR-------------CPECCELVDDRGWNVLHFAMVSFDK 47
            TALH+A  + N  +V  +++                         G   L  A  +   
Sbjct: 102 QTALHIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQL 161

Query: 48  SDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAAVCPDPRPYNAGYGIIPYKIAKGYYQAV 107
           + +K LL       + I  +D  GNT  H       D    N  +    Y         +
Sbjct: 162 AIVKFLLQNSWQPAD-ISARDSVGNTVLH-ALVEVADNTVDNTKFVTSMYNEILILGAKL 219

Query: 108 NKQNISVEHINRYGF 122
           +      E  NR G 
Sbjct: 220 HPTLKLEEITNRKGL 234

>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A* Length = 273

 Score = 39.8 bits (93), Expect = 6e-04
 Identities = 19/121 (15%), Positives = 34/121 (28%), Gaps = 43/121 (35%)

Query: 1   MTALHLAAGQGNDWIVQEIIQRCPECCEL--VDDRGWNVLHFA---------MVSFDKSD 49
              L LAA      IV+ ++Q   +  ++   D  G  VLH              F  S 
Sbjct: 149 ELPLSLAACTNQLAIVKFLLQNSWQPADISARDSVGNTVLHALVEVADNTVDNTKFVTSM 208

Query: 50  LKHLL------NEYP------------------------VVKNLIFEKDVKGNTPFHVLA 79
              +L      +                           V+  ++ ++++      H  A
Sbjct: 209 YNEILILGAKLHPTLKLEEITNRKGLTPLALAASSGKIGVLAYIL-QREIHEPECRH-AA 266

Query: 80  A 80
           A
Sbjct: 267 A 267

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score = 43.7 bits (104), Expect = 5e-05
 Identities = 13/80 (16%), Positives = 21/80 (26%), Gaps = 18/80 (22%)

Query: 1   MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVV 60
              +HLA       +V  +++          +RG                    +E  V 
Sbjct: 85  QKPIHLAVMANKTDLVVALVEGA-------KERGQMPESLLNEC----------DEREVN 127

Query: 61  KNLIFEKDVKGNTPFHVLAA 80
           +     K  KG T  H    
Sbjct: 128 EIGSHVKHCKGQTALH-WCV 146

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 44.1 bits (103), Expect = 5e-05
 Identities = 43/389 (11%), Positives = 103/389 (26%), Gaps = 114/389 (29%)

Query: 14  WIV----QEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDV 69
           W +    +E++Q+  E   L  +  + +          S +  +  E    ++ ++  D 
Sbjct: 69  WTLLSKQEEMVQKFVEEV-LRINYKFLMSPIKTEQRQPSMMTRMYIEQ---RDRLY-NDN 123

Query: 70  KGNTPFHVLAAVCPDPRPYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPELEKEI 129
           +    ++V        +PY         K+ +   +    +N+ +      G     K  
Sbjct: 124 QVFAKYNV-----SRLQPYL--------KLRQALLELRPAKNVLI-----DGVLGSGKTW 165

Query: 130 --KELAKADG-NGQYPDGV--IKMNKEKEENEVQVMPMIYPFWKYLDENVIGMKEASQSH 184
              ++  +     +    +  + +          V+ M+      +D N     + S + 
Sbjct: 166 VALDVCLSYKVQCKMDFKIFWLNLKNCNSPET--VLEMLQKLLYQIDPNWTSRSDHSSN- 222

Query: 185 LVVAALIATVTFAAAFTLPGGYKSETEDGANRGTAILS----KNA-----------AFQA 229
                                 K            +L     +N            A+ A
Sbjct: 223 ---------------------IKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNA 261

Query: 230 F-------VISDAIAMVLSLSA-VFVHFIL-----------SLKFFKKFIFLFVFAL--- 267
           F       + +    +   LSA    H  L                 K++      L   
Sbjct: 262 FNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPRE 321

Query: 268 ----SFTLVAM-AAMIVAFVT--GTYAMLATPSLGLAIVTCIIGLT-------FFLLVIF 313
               +   +++ A  I   +     +  +    L   I + +  L        F  L +F
Sbjct: 322 VLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVF 381

Query: 314 MF-----YMVFSR--AEEEEYEVEEEMED 335
                   ++ S    +  + +V   +  
Sbjct: 382 PPSAHIPTILLSLIWFDVIKSDVMVVVNK 410

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B Length = 156

 Score = 42.0 bits (100), Expect = 5e-05
 Identities = 16/85 (18%), Positives = 28/85 (32%), Gaps = 18/85 (21%)

Query: 2  TALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVK 61
            L  AA +G+   V+ ++ R     + ++  G   L   M                +  
Sbjct: 4  DRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMM-------FGST----AIAL 52

Query: 62 NLIF------EKDVKGNTPFHVLAA 80
           L+        +D  G +P H  AA
Sbjct: 53 ELLKQGASPNVQDTSGTSPVH-DAA 76

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Length = 236

 Score = 42.5 bits (101), Expect = 7e-05
 Identities = 18/88 (20%), Positives = 31/88 (35%), Gaps = 20/88 (22%)

Query: 2  TALHLAAGQGNDWIVQEIIQRCPECCELV---DDRGWNVLHFAMVSFDKSDLKHLLNEYP 58
          + LHLA       +  E+I++       +   ++     LH A                 
Sbjct: 10 SFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLA------VITNQP----E 59

Query: 59 VVKNLIF------EKDVKGNTPFHVLAA 80
          + + L+        +D +GNTP H LA 
Sbjct: 60 IAEALLGAGCDPELRDFRGNTPLH-LAC 86

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Length = 236

 Score = 40.2 bits (95), Expect = 4e-04
 Identities = 23/91 (25%), Positives = 32/91 (35%), Gaps = 23/91 (25%)

Query: 2   TALHLAAGQGNDWIVQEIIQRCPECC-----ELVDDRGWNVLHFAMVSFDKSDLKHLLNE 56
           T LHLA  QG    V  + Q C         +  +  G   LH A      S   +L   
Sbjct: 80  TPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLA------SIHGYL--- 130

Query: 57  YPVVKNLIF------EKD-VKGNTPFHVLAA 80
             +V+ L+        ++   G T  H LA 
Sbjct: 131 -GIVELLVSLGADVNAQEPCNGRTALH-LAV 159

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241

 Score = 42.4 bits (101), Expect = 8e-05
 Identities = 20/88 (22%), Positives = 30/88 (34%), Gaps = 20/88 (22%)

Query: 2  TALHLAAGQGNDWIVQEIIQRCPECC---ELVDDRGWNVLHFAMVSFDKSDLKHLLNEYP 58
          T LH+A  QGN   V  ++    +     ++ ++     LH A                 
Sbjct: 11 TPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLA------VITTLP----S 60

Query: 59 VVKNLIF------EKDVKGNTPFHVLAA 80
          VV+ L+         D  G T  H LA 
Sbjct: 61 VVRLLVTAGASPMALDRHGQTAAH-LAC 87

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A Length = 179

 Score = 41.3 bits (98), Expect = 1e-04
 Identities = 20/86 (23%), Positives = 30/86 (34%), Gaps = 17/86 (19%)

Query: 1  MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVV 60
          M  +     +GN   V+  +          DD G++ LH+A                 VV
Sbjct: 6  MDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWA------CREGRS--A--VV 55

Query: 61 KNLIF------EKDVKGNTPFHVLAA 80
          + LI         +   +TP H LAA
Sbjct: 56 EMLIMRGARINVMNRGDDTPLH-LAA 80

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score = 42.5 bits (101), Expect = 1e-04
 Identities = 21/86 (24%), Positives = 34/86 (39%), Gaps = 18/86 (20%)

Query: 1   MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVV 60
           +T LHL A +G+  +   +I+      +     G+  LH A      S   ++     +V
Sbjct: 279 LTPLHLVAQEGHVPVADVLIKHGVM-VDATTRMGYTPLHVA------SHYGNIK----LV 327

Query: 61  KNLIF------EKDVKGNTPFHVLAA 80
           K L+        K   G +P H  AA
Sbjct: 328 KFLLQHQADVNAKTKLGYSPLH-QAA 352

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score = 41.3 bits (98), Expect = 3e-04
 Identities = 22/86 (25%), Positives = 34/86 (39%), Gaps = 18/86 (20%)

Query: 1  MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVV 60
          +T LH+A+  G+  IV+ ++QR      + + +    LH A      +   H      V 
Sbjct: 15 LTPLHVASFMGHLPIVKNLLQRGAS-PNVSNVKVETPLHMA------ARAGHT----EVA 63

Query: 61 KNLIF------EKDVKGNTPFHVLAA 80
          K L+        K     TP H  AA
Sbjct: 64 KYLLQNKAKVNAKAKDDQTPLHC-AA 88

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score = 41.3 bits (98), Expect = 3e-04
 Identities = 20/86 (23%), Positives = 30/86 (34%), Gaps = 18/86 (20%)

Query: 1   MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVV 60
            T LH+AA Q    + + ++Q           +G   LH A      +   H      +V
Sbjct: 213 YTPLHIAAKQNQVEVARSLLQYGGS-ANAESVQGVTPLHLA------AQEGHA----EMV 261

Query: 61  KNLIF------EKDVKGNTPFHVLAA 80
             L+         +  G TP H L A
Sbjct: 262 ALLLSKQANGNLGNKSGLTPLH-LVA 286

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score = 40.9 bits (97), Expect = 4e-04
 Identities = 19/86 (22%), Positives = 33/86 (38%), Gaps = 18/86 (20%)

Query: 1   MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVV 60
            T LH+AA +G+   V  ++++       +  +G+  LH A      +    +     V 
Sbjct: 114 HTPLHIAAREGHVETVLALLEKEAS-QACMTKKGFTPLHVA------AKYGKV----RVA 162

Query: 61  KNLIF------EKDVKGNTPFHVLAA 80
           + L+            G TP HV A 
Sbjct: 163 ELLLERDAHPNAAGKNGLTPLHV-AV 187

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285

 Score = 41.7 bits (99), Expect = 2e-04
 Identities = 17/86 (19%), Positives = 30/86 (34%), Gaps = 13/86 (15%)

Query: 1   MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVV 60
            TAL  AA +G+  +++ ++          D+ G N L  A             +   + 
Sbjct: 149 ATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHA------LLSSDDSDVEAIT 202

Query: 61  KNLIF------EKDVKGNTPFHVLAA 80
             L+        +  +G TP   LA 
Sbjct: 203 HLLLDHGADVNVRGERGKTPLI-LAV 227

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Length = 167

 Score = 40.4 bits (96), Expect = 2e-04
 Identities = 14/86 (16%), Positives = 27/86 (31%), Gaps = 18/86 (20%)

Query: 1  MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVV 60
            ++H  A QG    +   I++        D+ G+  L +A      +    +     VV
Sbjct: 4  SLSVHQLAAQGEMLYLATRIEQENV-INHTDEEGFTPLMWA------AAHGQI----AVV 52

Query: 61 KNLIF------EKDVKGNTPFHVLAA 80
          + L+              +    LA 
Sbjct: 53 EFLLQNGADPQLLGKGRESALS-LAC 77

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222

 Score = 40.7 bits (96), Expect = 2e-04
 Identities = 9/79 (11%), Positives = 18/79 (22%), Gaps = 11/79 (13%)

Query: 2  TALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVK 61
            +  A          E+     +    + D               +          +  
Sbjct: 14 VKVFRALYTFEPRTPDELYIEEGD-IIYITDMSDTNWWKG------TSKGRTG---LIPS 63

Query: 62 NLIFEKDVKGNTPFHVLAA 80
          N + E+    + P H  AA
Sbjct: 64 NYVAEQAESIDNPLH-EAA 81

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222

 Score = 39.5 bits (93), Expect = 7e-04
 Identities = 19/86 (22%), Positives = 32/86 (37%), Gaps = 19/86 (22%)

Query: 2   TALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVK 61
             LH AA +GN   ++E +         +D  G   L++A          H      +V+
Sbjct: 75  NPLHEAAKRGNLSWLRECLDNRVG-VNGLDKAGSTALYWA------CHGGHK----DIVE 123

Query: 62  NLIF-------EKDVKGNTPFHVLAA 80
            L         +++  G+T  H  AA
Sbjct: 124 MLFTQPNIELNQQNKLGDTALH-AAA 148

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373

 Score = 41.1 bits (97), Expect = 3e-04
 Identities = 21/97 (21%), Positives = 35/97 (36%), Gaps = 28/97 (28%)

Query: 1   MTALHLAAGQGNDWIVQ----------EIIQRCPECCELVDDRGWNVLHFAMVSFDKSDL 50
           MTAL + A       V           ++        +    +G   LH+A      + +
Sbjct: 236 MTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYA------AQV 289

Query: 51  KHLLNEYPVVKNLIF-------EKDVKGNTPFHVLAA 80
            ++    P+VK L+        ++D  G TP   LAA
Sbjct: 290 SNM----PIVKYLVGEKGSNKDKQDEDGKTPIM-LAA 321

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score = 40.9 bits (97), Expect = 4e-04
 Identities = 26/86 (30%), Positives = 32/86 (37%), Gaps = 18/86 (20%)

Query: 1   MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVV 60
            T LHLAAG     IVQ ++Q   +     D  G   LH A          H   E  V 
Sbjct: 59  STPLHLAAGYNRVRIVQLLLQHGAD-VHAKDKGGLVPLHNA------CSYGHY--E--VT 107

Query: 61  KNLIF------EKDVKGNTPFHVLAA 80
           + L+         D+   TP H  AA
Sbjct: 108 ELLLKHGACVNAMDLWQFTPLH-EAA 132

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253

 Score = 39.8 bits (94), Expect = 6e-04
 Identities = 18/98 (18%), Positives = 24/98 (24%), Gaps = 30/98 (30%)

Query: 2  TALHLAAGQGNDWIVQEIIQR--CPECCEL-----------VDDRGWNVLHFAMVSFDKS 48
          T L +A+  G         +    P                 D  G   LH A       
Sbjct: 12 TPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQTDRTGETALHLAA------ 65

Query: 49 DLKHLLNEYPVVKNLIF------EKDVKGNTPFHVLAA 80
                +     K L+        +D  G TP H  A 
Sbjct: 66 ----RYSRSDAAKRLLEASADANIQDNMGRTPLH-AAV 98

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} Length = 201

 Score = 39.0 bits (92), Expect = 9e-04
 Identities = 20/85 (23%), Positives = 34/85 (40%), Gaps = 12/85 (14%)

Query: 2   TALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVK 61
            AL  AA +G+   V+ +++   E  +  +D G+  L  A V   + +  +      +VK
Sbjct: 108 NALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEA-VGLREGNQLYQ----DIVK 162

Query: 62  NLIF------EKDVKGNTPFHVLAA 80
            L+        KD  G T     A 
Sbjct: 163 LLMENGADQSIKDNSGRTAMD-YAN 186

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	335
4gpm_A	169	Engineered protein OR264; de novo protein, structu	99.91
4gpm_A	169	Engineered protein OR264; de novo protein, structu	99.89
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	99.88
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	99.88
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	99.87
3twr_A	165	Tankyrase-2; ankyrin repeat, protein-protein inter	99.87
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	99.87
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	99.86
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	99.86
3v30_A	172	DNA-binding protein rfxank; structural genomics co	99.86
4b93_B	269	Ankyrin repeat domain-containing protein 27; endoc	99.86
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	99.86
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	99.86
3v30_A	172	DNA-binding protein rfxank; structural genomics co	99.86
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	99.85
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	99.85
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	99.85
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	99.85
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	99.85
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	99.85
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	99.85
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	99.84
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	99.84
3twr_A	165	Tankyrase-2; ankyrin repeat, protein-protein inter	99.84
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	99.84
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	99.84
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	99.84
2rfa_A	232	Transient receptor potential cation channel subfa	99.84
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	99.84
3jxi_A	260	Vanilloid receptor-related osmotically activated p	99.84
2etb_A	256	Transient receptor potential cation channel subfam	99.83
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	99.83
4b93_B	269	Ankyrin repeat domain-containing protein 27; endoc	99.83
2pnn_A	273	Transient receptor potential cation channel subfa	99.83
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	99.82
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	99.82
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	99.82
3hra_A	201	Ankyrin repeat family protein; structural protein;	99.82
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	99.82
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	99.82
4hbd_A	276	KN motif and ankyrin repeat domain-containing Pro;	99.82
2rfa_A	232	Transient receptor potential cation channel subfa	99.82
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	99.82
2vge_A	229	RELA-associated inhibitor; iaspp, nucleus, apoptos	99.82
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	99.82
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	99.82
3hra_A	201	Ankyrin repeat family protein; structural protein;	99.82
1dcq_A	278	PYK2-associated protein beta; zinc-binding module,	99.82
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	99.82
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	99.81
3ui2_A	244	Signal recognition particle 43 kDa protein, chlor;	99.81
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	99.81
3aji_A	231	26S proteasome non-ATPase regulatory subunit 10; g	99.81
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	99.81
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	99.81
3aji_A	231	26S proteasome non-ATPase regulatory subunit 10; g	99.81
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	99.81
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	99.8
2b0o_E	301	UPLC1; arfgap, structural genomics, structural gen	99.8
2pnn_A	273	Transient receptor potential cation channel subfa	99.8
1sw6_A	327	Regulatory protein SWI6; transcription regulation,	99.8
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	99.8
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	99.79
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	99.79
2etb_A	256	Transient receptor potential cation channel subfam	99.79
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	99.79
3jxi_A	260	Vanilloid receptor-related osmotically activated p	99.79
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	99.79
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	99.79
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	99.79
2l6b_A	115	NR1C; ankyrin, consensus, repeat protein, ising mo	99.78
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	99.78
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	99.78
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	99.77
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	99.77
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	99.77
3lvq_E	497	ARF-GAP with SH3 domain, ANK repeat and PH domain	99.77
3jue_A	368	Arfgap with coiled-coil, ANK repeat and PH domain	99.77
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	99.77
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	99.77
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	99.77
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	99.76
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	99.76
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	99.76
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	99.75
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	99.75
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	99.75
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	99.74
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	99.74
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	99.74
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	99.73
4g8k_A	337	2-5A-dependent ribonuclease; ankyrin-repeat domain	99.73
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	99.73
1sw6_A	327	Regulatory protein SWI6; transcription regulation,	99.72
4g8k_A	337	2-5A-dependent ribonuclease; ankyrin-repeat domain	99.71
2b0o_E	301	UPLC1; arfgap, structural genomics, structural gen	99.71
4hbd_A	276	KN motif and ankyrin repeat domain-containing Pro;	99.67
2vge_A	229	RELA-associated inhibitor; iaspp, nucleus, apoptos	99.67
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	99.66
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	99.66
2zgd_A	110	3 repeat synthetic ankyrin; ankyrin repeat, hydrox	99.65
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	99.65
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	99.65
2l6b_A	115	NR1C; ankyrin, consensus, repeat protein, ising mo	99.64
3lvq_E	497	ARF-GAP with SH3 domain, ANK repeat and PH domain	99.62
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	99.62
1dcq_A	278	PYK2-associated protein beta; zinc-binding module,	99.61
2zgd_A	110	3 repeat synthetic ankyrin; ankyrin repeat, hydrox	99.61
2aja_A	376	Ankyrin repeat family protein; NESG, Q5ZSV0, struc	99.61
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	99.59
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	99.58
3jue_A	368	Arfgap with coiled-coil, ANK repeat and PH domain	99.58
2aja_A	376	Ankyrin repeat family protein; NESG, Q5ZSV0, struc	99.53
3ui2_A	244	Signal recognition particle 43 kDa protein, chlor;	99.51

>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A

Probab=99.91  E-value=2.3e-24  Score=179.27  Aligned_cols=131  Identities=22%  Similarity=0.189  Sum_probs=97.4

Q ss_pred             chHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHhc
Q 019816            2 TALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAAV   81 (335)
Q Consensus         2 TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~~   81 (335)
                      ++|+.||+.|+.++|+.|+++|++++. +|.+|+||||+|+..++.++++.|+    ..+++++.+|.+|+||||+|+..
T Consensus         6 ~~L~~Aa~~G~~~~v~~Ll~~Gadvn~-~d~~g~t~l~~a~~~~~~~~~~~ll----~~gad~~~~d~~g~TpLh~A~~~   80 (169)
T 4gpm_A            6 KRLIEAAENGNKDRVKDLIENGADVNA-SDSDGRTPLHHAAENGHKEVVKLLI----SKGADVNAKDSDGRTPLHHAAEN   80 (169)
T ss_dssp             HHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHH----HTTCCTTCCCTTSCCHHHHHHHT
T ss_pred             HHHHHHHHcCCHHHHHHHHHCCCCCCC-cCCCCCCHHHHHHHcCCHHHHHHHH----hcccchhhhccCCCCHHHHHHHc
Confidence            367888888888888888888887754 6788888888888888888888777    46777888888888888888888


Q ss_pred             CCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhcCCchHHHHHHHHHHcC--------CCCCCcchhhh
Q 019816           82 CPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPELEKEIKELAKADG--------NGQYPDGVIKM  148 (335)
Q Consensus        82 g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~~~--------~~~~p~~~~~~  148 (335)
                      |+.++ ++|        +..|++++.+|.+|+||||+|+..+..   ++++.|.+.+        .|.+|++....
T Consensus        81 g~~~~v~~L--------l~~gadvn~~d~~G~TpLh~A~~~g~~---~~v~~Ll~~gad~~~~d~~G~TpL~~A~~  145 (169)
T 4gpm_A           81 GHKEVVKLL--------ISKGADVNAKDSDGRTPLHHAAENGHK---EVVKLLISKGADVNTSDSDGRTPLDLARE  145 (169)
T ss_dssp             TCHHHHHHH--------HHTTCCTTCCCTTSCCHHHHHHHTTCH---HHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred             CCHHHHHHH--------HHCcCCCCCCCCCCCCHHHHHHHcCCH---HHHHHHHHcCCCccccCCCCCCHHHHHHH
Confidence            87777 777        677788888888888888888876643   6666666533        34456665443

>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A

Probab=99.89  E-value=2.7e-23  Score=172.79  Aligned_cols=123  Identities=23%  Similarity=0.197  Sum_probs=113.2

Q ss_pred             CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHh
Q 019816            1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAA   80 (335)
Q Consensus         1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~   80 (335)
                      +||||+|+..|+.++++.|++.+++++. +|.+|+||||+|+..|+.+++++|+    ..|+++|.+|.+|+||||+|+.
T Consensus        38 ~t~l~~a~~~~~~~~~~~ll~~gad~~~-~d~~g~TpLh~A~~~g~~~~v~~Ll----~~gadvn~~d~~G~TpLh~A~~  112 (169)
T 4gpm_A           38 RTPLHHAAENGHKEVVKLLISKGADVNA-KDSDGRTPLHHAAENGHKEVVKLLI----SKGADVNAKDSDGRTPLHHAAE  112 (169)
T ss_dssp             CCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHH----HTTCCTTCCCTTSCCHHHHHHH
T ss_pred             CCHHHHHHHcCCHHHHHHHHhcccchhh-hccCCCCHHHHHHHcCCHHHHHHHH----HCcCCCCCCCCCCCCHHHHHHH
Confidence            5999999999999999999999999865 7999999999999999999999999    5789999999999999999999


Q ss_pred             cCCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhcCCchHHHHHHHHHHcCCC
Q 019816           81 VCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPELEKEIKELAKADGNG  139 (335)
Q Consensus        81 ~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~~~~~  139 (335)
                      .|+.++ ++|        +..|++++.+|.+|+||||+|+..+..   +++++|.++|+.
T Consensus       113 ~g~~~~v~~L--------l~~gad~~~~d~~G~TpL~~A~~~g~~---~iv~~Ll~~GA~  161 (169)
T 4gpm_A          113 NGHKEVVKLL--------ISKGADVNTSDSDGRTPLDLAREHGNE---EVVKLLEKQGGW  161 (169)
T ss_dssp             TTCHHHHHHH--------HHTTCCTTCCCTTSCCHHHHHHHTTCH---HHHHHHHTC---
T ss_pred             cCCHHHHHHH--------HHcCCCccccCCCCCCHHHHHHHcCCH---HHHHHHHHCCCC
Confidence            999999 888        889999999999999999999988754   889999988875

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C

Probab=99.88  E-value=4.8e-23  Score=164.59  Aligned_cols=120  Identities=19%  Similarity=0.058  Sum_probs=109.5

Q ss_pred             CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHh
Q 019816            1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAA   80 (335)
Q Consensus         1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~   80 (335)
                      +||||+|++.|+.++++.|++.+++++. +|..|+||||+|+.+|+.++++.|+    ..++++|.+|.+|+||||+|+.
T Consensus        15 ~t~l~~A~~~g~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll----~~g~~~~~~d~~g~t~L~~A~~   89 (136)
T 2jab_A           15 GKKLLEAARAGQDDEVRILMANGADVNA-KDEYGLTPLYLATAHGHLEIVEVLL----KNGADVNAVDAIGFTPLHLAAF   89 (136)
T ss_dssp             HHHHHHHHHHTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHHTCHHHHHHHH----HTTCCTTCCCTTCCCHHHHHHH
T ss_pred             cHHHHHHHHhCCHHHHHHHHHcCCCCCC-cCCCCCCHHHHHHHcCCHHHHHHHH----HcCCCCCcCCCCCCCHHHHHHH
Confidence            3899999999999999999999999865 7999999999999999999999999    4688999999999999999999


Q ss_pred             cCCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhcCCchHHHHHHHHHHc
Q 019816           81 VCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPELEKEIKELAKAD  136 (335)
Q Consensus        81 ~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~~  136 (335)
                      .|+.++ ++|        +..+++++.+|.+|+||+|+|+..+..   +++++|.+.
T Consensus        90 ~~~~~~v~~L--------l~~g~~~~~~~~~g~tpl~~A~~~~~~---~~~~~Ll~~  135 (136)
T 2jab_A           90 IGHLEIAEVL--------LKHGADVNAQDKFGKTAFDISIGNGNE---DLAEILQKL  135 (136)
T ss_dssp             HTCHHHHHHH--------HHTTCCTTCCCTTSCCHHHHHHHTTCH---HHHHHHHHC
T ss_pred             cCCHHHHHHH--------HHcCCCCcCcCCCCCCHHHHHHHCCCH---HHHHHHHHc
Confidence            999999 888        788999999999999999999988754   677776653

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1

Probab=99.88  E-value=2.4e-23  Score=166.29  Aligned_cols=121  Identities=13%  Similarity=-0.006  Sum_probs=110.5

Q ss_pred             CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCC-CCchhHHHH
Q 019816            1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVK-GNTPFHVLA   79 (335)
Q Consensus         1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~-G~TpLH~Aa   79 (335)
                      +||||+|++.|+.+++++|++++++++. +|..|+||||+|+. |+.+++++|+    ..+++++.+|.. |+||||+|+
T Consensus        13 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~-~~~~~v~~Ll----~~g~~~~~~~~~~g~t~L~~A~   86 (136)
T 1d9s_A           13 DAGLATAAARGQVETVRQLLEAGADPNA-LNRFGRRPIQVMMM-GSAQVAELLL----LHGAEPNCADPATLTRPVHDAA   86 (136)
T ss_dssp             SCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTCCTTTTTSTT-SCHHHHHHHH----HHTCCSSCCBTTTTBCHHHHHH
T ss_pred             ccHHHHHHHcCCHHHHHHHHHcCCCcCC-cCCCCCCHHHHHHc-CCHHHHHHHH----HCCCCCCCcCCCCCCCHHHHHH
Confidence            5899999999999999999999998865 79999999999999 9999999999    578999999999 999999999


Q ss_pred             hcCCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhcCCchHHHHHHHHHHcCC
Q 019816           80 AVCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPELEKEIKELAKADGN  138 (335)
Q Consensus        80 ~~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~~~~  138 (335)
                      ..|+.++ ++|        +..+++++.+|..|+||+|+|+..+..   +++++|.++|+
T Consensus        87 ~~~~~~~v~~L--------l~~ga~~~~~d~~g~tpl~~A~~~~~~---~~~~~Ll~~Ga  135 (136)
T 1d9s_A           87 REGFLDTLVVL--------HRAGARLDVCDAWGRLPVDLAEEQGHR---DIARYLHAATG  135 (136)
T ss_dssp             HHTCHHHHHHH--------HHTCCCCCCCSSSSSCHHHHHHHHTCH---HHHHHHHHHHC
T ss_pred             HcCCHHHHHHH--------HHcCCCCCccCCCCCCHHHHHHHcCCH---HHHHHHHHcCC
Confidence            9999999 888        889999999999999999999987754   77777776554

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1

Probab=99.87  E-value=4.1e-22  Score=155.87  Aligned_cols=122  Identities=25%  Similarity=0.192  Sum_probs=111.7

Q ss_pred             CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHh
Q 019816            1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAA   80 (335)
Q Consensus         1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~   80 (335)
                      +||||+|++.|+.+++++|++.++++.. .|..|+||||+|+..++.+++++|+    ..+.+++.+|..|+||||+|+.
T Consensus         3 ~t~L~~A~~~~~~~~v~~Ll~~~~~~~~-~~~~g~t~L~~A~~~~~~~~~~~Ll----~~g~~~~~~~~~g~t~l~~A~~   77 (126)
T 1n0r_A            3 RTPLHLAARNGHLEVVKLLLEAGADVNA-KDKNGRTPLHLAARNGHLEVVKLLL----EAGADVNAKDKNGRTPLHLAAR   77 (126)
T ss_dssp             CCHHHHHHHHTCHHHHHHHHHHTCCTTC-CCTTSCCHHHHHHHHTCHHHHHHHH----HTTCCTTCCCTTSCCHHHHHHH
T ss_pred             ccHHHHHHHcCcHHHHHHHHHcCCCCCC-cCCCCCcHHHHHHHcCcHHHHHHHH----HcCCCCcccCCCCCcHHHHHHH
Confidence            5999999999999999999999998865 7999999999999999999999999    4688999999999999999999


Q ss_pred             cCCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhcCCchHHHHHHHHHHcCC
Q 019816           81 VCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPELEKEIKELAKADGN  138 (335)
Q Consensus        81 ~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~~~~  138 (335)
                      .++.++ ++|        ...+++++.+|.+|.||+++|+..+..   +++++|.+.|+
T Consensus        78 ~~~~~~~~~L--------l~~g~~~~~~~~~g~t~l~~A~~~~~~---~~~~~Ll~~Ga  125 (126)
T 1n0r_A           78 NGHLEVVKLL--------LEAGADVNAKDKNGRTPLHLAARNGHL---EVVKLLLEAGA  125 (126)
T ss_dssp             TTCHHHHHHH--------HHTTCCTTCCCTTSCCHHHHHHHTTCH---HHHHHHHHHTC
T ss_pred             cChHHHHHHH--------HHcCCCCcccCCCCCCHHHHHHHcCcH---HHHHHHHHcCC
Confidence            999998 888        788999999999999999999987743   78888877664

>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*

Probab=99.87  E-value=2.4e-22  Score=165.52  Aligned_cols=130  Identities=20%  Similarity=0.121  Sum_probs=108.5

Q ss_pred             chHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHhc
Q 019816            2 TALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAAV   81 (335)
Q Consensus         2 TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~~   81 (335)
                      ||||.|++.|+.++++.|++.++......|..|+||||+|+..|+.+++++|+    ..+.+++.+|.+|+||||+|+..
T Consensus        10 ~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll----~~g~~~~~~~~~g~t~L~~A~~~   85 (165)
T 3twr_A           10 RQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLL----QHGADVHAKDKGGLVPLHNACSY   85 (165)
T ss_dssp             HHHHHHHHHTCHHHHHHHCCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHH----HTTCCTTCCCTTSCCHHHHHHHT
T ss_pred             HHHHHHHHhCCHHHHHHHHHcCCCCccccccCCCCHHHHHHHcChHHHHHHHH----hcCCCCCccCCCCCCHHHHHHHc
Confidence            78999999999999999998766555557888999999999999999999999    46788999999999999999999


Q ss_pred             CCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhcCCchHHHHHHHHHHcC--------CCCCCcchh
Q 019816           82 CPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPELEKEIKELAKADG--------NGQYPDGVI  146 (335)
Q Consensus        82 g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~~~--------~~~~p~~~~  146 (335)
                      |+.++ ++|        +..+++++.+|..|+||||+|+..+..   +++++|.+.+        .+.+|++..
T Consensus        86 ~~~~~v~~L--------l~~g~~~~~~~~~g~t~L~~A~~~~~~---~~v~~Ll~~ga~~~~~~~~g~t~l~~a  148 (165)
T 3twr_A           86 GHYEVAELL--------VKHGAVVNVADLWKFTPLHEAAAKGKY---EICKLLLQHGADPTKKNRDGNTPLDLV  148 (165)
T ss_dssp             TCHHHHHHH--------HHTTCCTTCCCTTCCCHHHHHHHTTCH---HHHHHHHHTTCCTTCCCTTSCCTGGGS
T ss_pred             CcHHHHHHH--------HhCCCCCCCcCCCCCCHHHHHHHcCCH---HHHHHHHHcCCCCcccCCCCCChhHhH
Confidence            99888 888        788999999999999999999987743   6777776643        345677654

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1

Probab=99.87  E-value=3.4e-22  Score=162.69  Aligned_cols=119  Identities=20%  Similarity=0.053  Sum_probs=107.6

Q ss_pred             chHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHhc
Q 019816            2 TALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAAV   81 (335)
Q Consensus         2 TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~~   81 (335)
                      ||||.|++.|+.++++.|++.+++..  .|..|+||||+|+..|+.+++++|+    ..+.+++.+|.+|+||||+|+..
T Consensus         4 ~~L~~A~~~g~~~~v~~Ll~~g~~~~--~~~~g~t~L~~A~~~~~~~~v~~Ll----~~g~~~~~~~~~g~t~L~~A~~~   77 (153)
T 1awc_B            4 KKLLEAARAGQDDEVRILMANGAPFT--TDWLGTSPLHLAAQYGHFSTTEVLL----RAGVSRDARTKVDRTPLHMAASE   77 (153)
T ss_dssp             HHHHHHHHHTCHHHHHHHHHHTCCCC--CCTTCCCHHHHHHHHTCHHHHHHHH----TTTCCTTCCCTTCCCHHHHHHHH
T ss_pred             HHHHHHHHcCCHHHHHHHHHcCCCCC--cCCCCCCHHHHHHHcCCHHHHHHHH----HcCCCCCCCCCCCCCHHHHHHHc
Confidence            79999999999999999999998764  5889999999999999999999999    57889999999999999999999


Q ss_pred             CCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhcCCchHHHHHHHHHHcC
Q 019816           82 CPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPELEKEIKELAKADG  137 (335)
Q Consensus        82 g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~~~  137 (335)
                      |+.++ ++|        +..|++++.+|..|+||+|+|+..+..   +++++|.+.+
T Consensus        78 ~~~~~v~~L--------l~~g~~~~~~~~~g~t~L~~A~~~~~~---~~v~~Ll~~g  123 (153)
T 1awc_B           78 GHANIVEVL--------LKHGADVNAKDMLKMTALHWATEHNHQ---EVVELLIKYG  123 (153)
T ss_dssp             TCHHHHHHH--------HTTTCCTTCCCTTSCCHHHHHHHTTCH---HHHHHHHHTT
T ss_pred             ChHHHHHHH--------HHcCCCCCCCCCCCCCHHHHHHHcCCH---HHHHHHHHcC
Confidence            99998 888        788999999999999999999987754   7788777754

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1

Probab=99.86  E-value=6.9e-23  Score=163.68  Aligned_cols=119  Identities=21%  Similarity=0.120  Sum_probs=106.4

Q ss_pred             CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHh
Q 019816            1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAA   80 (335)
Q Consensus         1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~   80 (335)
                      +||||+|+..|+.+++++|++.+++++. +|..|+||||+|+..|+.+++++|+    ..+.+++.+|.+|+||||+|+.
T Consensus        11 ~t~L~~A~~~~~~~~~~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~~~~Ll----~~g~~~~~~~~~g~t~L~~A~~   85 (137)
T 3c5r_A           11 ETLLHIASIKGDIPSVEYLLQNGSDPNV-KDHAGWTPLHEACNHGHLKVVELLL----QHKALVNTTGYQNDSPLHDAAK   85 (137)
T ss_dssp             CCHHHHHHHHTCHHHHHHHHHTTCCSCC-CCTTSCCHHHHHHHTTCHHHHHHHH----HTTCCTTCCCGGGCCHHHHHHH
T ss_pred             CCHHHHHHHcCCHHHHHHHHHcCCCCCc-CCCCCCCHHHHHHHcCCHHHHHHHH----HcCCcccCcCCCCCCHHHHHHH
Confidence            5999999999999999999999998865 7999999999999999999999999    5688999999999999999999


Q ss_pred             cCCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhcCCchHHHHHHHHHH
Q 019816           81 VCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPELEKEIKELAKA  135 (335)
Q Consensus        81 ~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~  135 (335)
                      .|+.++ ++|        +..|++++.+|.+|+||+|+|...+   ..++++++.+
T Consensus        86 ~~~~~~v~~L--------l~~ga~~~~~~~~g~tpl~~A~~~~---~~~~l~~l~~  130 (137)
T 3c5r_A           86 NGHVDIVKLL--------LSYGASRNAVNIFGLRPVDYTDDES---MKSLLLLPEK  130 (137)
T ss_dssp             TTCHHHHHHH--------HHTTCCTTCCCTTSCCGGGGCCCHH---HHHHHSCC--
T ss_pred             cCCHHHHHHH--------HHcCCCCCCCCCCCCCHHHHHhhcc---HHHHHhhccc
Confidence            999999 888        7889999999999999999998543   4466665544

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A

Probab=99.86  E-value=3.6e-22  Score=156.58  Aligned_cols=106  Identities=13%  Similarity=0.009  Sum_probs=99.8

Q ss_pred             CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHh
Q 019816            1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAA   80 (335)
Q Consensus         1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~   80 (335)
                      +||||+|+..|+.++++.|++.+++++. +|..|+||||+|+..|+.+++++|+    ..++++|.+|.+|+||||+|+.
T Consensus         8 ~~~l~~A~~~~~~~~v~~ll~~~~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll----~~g~~~~~~d~~g~tpL~~A~~   82 (123)
T 3aaa_C            8 DKEFMWALKNGDLDEVKDYVAKGEDVNR-TLEGGRKPLHYAADCGQLEILEFLL----LKGADINAPDKHHITPLLSAVY   82 (123)
T ss_dssp             HHHHHHHHHTTCHHHHHHHHHTTCCTTS-CCTTSSCHHHHHHHTTCHHHHHHHH----TTTCCTTCCCTTSCCHHHHHHH
T ss_pred             chHHHHHHHcCCHHHHHHHHHcCCCcCc-cCCCCCcHHHHHHHcCCHHHHHHHH----HcCCCCCcCCCCCCCHHHHHHH
Confidence            3799999999999999999999998855 7999999999999999999999999    5789999999999999999999


Q ss_pred             cCCCCc-ccccccCcccccccccccccccCCCCCHHHHHH
Q 019816           81 VCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINR  119 (335)
Q Consensus        81 ~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~  119 (335)
                      .|+.++ ++|        +..+++++.+|.+|+||+|+|.
T Consensus        83 ~~~~~~v~~L--------l~~ga~~~~~~~~g~t~l~~A~  114 (123)
T 3aaa_C           83 EGHVSCVKLL--------LSKGADKTVKGPDGLTAFEATD  114 (123)
T ss_dssp             HTCHHHHHHH--------HHTTCCTTCCCTTSCCHHHHCC
T ss_pred             cCCHHHHHHH--------HHcCCCCCCcCCCCCCHHHHhC
Confidence            999999 888        7889999999999999999995

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A

Probab=99.86  E-value=7.5e-22  Score=163.64  Aligned_cols=133  Identities=14%  Similarity=0.006  Sum_probs=111.1

Q ss_pred             CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHh
Q 019816            1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAA   80 (335)
Q Consensus         1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~   80 (335)
                      .||||.|+..|+.++++.|++.+++....+|..|+||||+|+..|+.+++++|+    ..+++++.+|.+|+||||+|+.
T Consensus         3 ~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll----~~g~~~~~~~~~g~t~L~~A~~   78 (172)
T 3v30_A            3 SLSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLL----EWGADPHILAKERESALSLAST   78 (172)
T ss_dssp             -CCHHHHHHTTCHHHHHHHHTTCSGGGGCCCTTSCCHHHHHHHTTCHHHHHHHH----HHTCCTTCCCTTCCCHHHHHHH
T ss_pred             hhhHHHHHHcCCHHHHHHHHHcCcccccCCCCCCCCHHHHHHHcCCHHHHHHHH----HcCCCchhhcccCCCHHHHHHH
Confidence            479999999999999999999998866668899999999999999999999999    4678899999999999999999


Q ss_pred             cCCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhcCCchHHHHHHHHHHcCC--------CCCCcchhhh
Q 019816           81 VCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPELEKEIKELAKADGN--------GQYPDGVIKM  148 (335)
Q Consensus        81 ~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~~~~--------~~~p~~~~~~  148 (335)
                      .|+.++ ++|        +..+++++.+|..|+||||+|+..+..   +++++|.+.++        +.+|++....
T Consensus        79 ~~~~~~v~~L--------l~~g~~~~~~~~~g~t~L~~A~~~~~~---~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~  144 (172)
T 3v30_A           79 GGYTDIVGLL--------LERDVDINIYDWNGGTPLLYAVRGNHV---KCVEALLARGADLTTEADSGYTPMDLAVA  144 (172)
T ss_dssp             TTCHHHHHHH--------HTTTCCTTCCCTTSCCHHHHHHHTTCH---HHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred             CCCHHHHHHH--------HHcCCCCCCCCCCCCCHHHHHHHcCCH---HHHHHHHHcCCCccccCCCCCCHHHHHHH
Confidence            999888 888        788999999999999999999987744   67777766433        4456665443

>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}

Probab=99.86  E-value=1.4e-21  Score=174.59  Aligned_cols=131  Identities=18%  Similarity=0.078  Sum_probs=116.7

Q ss_pred             CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHh
Q 019816            1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAA   80 (335)
Q Consensus         1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~   80 (335)
                      +||||+||..|+.+++++|++.++++.. .+.+|+||+|+|+..++.++++.|+    ..++++|.+|.+|+||||+|+.
T Consensus        87 ~TpLh~A~~~g~~~~v~~Ll~~~a~~~~-~~~~g~t~l~~a~~~~~~~~~~~Ll----~~g~~~n~~d~~g~TpL~~A~~  161 (269)
T 4b93_B           87 SSPLHVAALHGRADLIPLLLKHGANAGA-RNADQAVPLHLACQQGHFQVVKCLL----DSNAKPNKKDLSGNTPLIYACS  161 (269)
T ss_dssp             CCHHHHHHHTTCTTHHHHHHHTTCCTTC-CCTTCCCHHHHHHHHTCHHHHHHHH----HTTCCSCCCCTTCCCHHHHHHH
T ss_pred             CCHHHHHHHcCcHHHHHHHHhcCCCcCc-cCCCCCCccccccccChHHHHHHHH----HCCCCCCCCCCCCCCHHHHHHH
Confidence            5899999999999999999999998865 7999999999999999999999999    5789999999999999999999


Q ss_pred             cCCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhcCCchHHHHHHHHHHcC--------CCCCCcchhh
Q 019816           81 VCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPELEKEIKELAKADG--------NGQYPDGVIK  147 (335)
Q Consensus        81 ~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~~~--------~~~~p~~~~~  147 (335)
                      .|+.++ ++|        +..|++++.+|..|.||||+|+..+..   +++++|.+.|        .|.+|++...
T Consensus       162 ~g~~~~v~~L--------l~~gadvn~~~~~g~t~Lh~A~~~g~~---~~v~~Ll~~Gad~~~~d~~G~TpL~~A~  226 (269)
T 4b93_B          162 GGHHELVALL--------LQHGASINASNNKGNTALHEAVIEKHV---FVVELLLLHGASVQVLNKRQRTAVDCAE  226 (269)
T ss_dssp             TTCGGGHHHH--------HHTTCCTTCBCTTSCBHHHHHHHTTCH---HHHHHHHHTTCCSCCCCTTSCCSGGGSC
T ss_pred             CCCHHHHHHH--------HHCCCCCCccccCCCcHHHHHHHcCCH---HHHHHHHHCCCCCCCcCCCCCCHHHHHH
Confidence            999999 888        889999999999999999999988754   7788887754        3456776553

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*

Probab=99.86  E-value=1.3e-21  Score=161.94  Aligned_cols=120  Identities=21%  Similarity=0.122  Sum_probs=109.0

Q ss_pred             chHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHhc
Q 019816            2 TALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAAV   81 (335)
Q Consensus         2 TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~~   81 (335)
                      ||||.||+.|+.+++++|++++++++. +|..|+||||+|+..|+.+++++|+    ..+.+++.+|.+|+||||+|+..
T Consensus        16 ~~l~~A~~~g~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll----~~g~~~~~~~~~g~t~L~~A~~~   90 (169)
T 2y1l_E           16 KKLLEAARAGRDDEVRILMANGADVNA-EDASGWTPLHLAAFNGHLEIVEVLL----KNGADVNAVDHAGMTPLRLAALF   90 (169)
T ss_dssp             HHHHHHHHHTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHH----HTTCCTTCCCTTSCCHHHHHHHT
T ss_pred             chHHHHHHcCCHHHHHHHHHCCCCCCC-CCCCCCCHHHHHHHcCCHHHHHHHH----HcCCCCCccCCCCCCHHHHHHHc
Confidence            689999999999999999999998865 7999999999999999999999999    46889999999999999999999


Q ss_pred             CCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhcCCchHHHHHHHHHHcC
Q 019816           82 CPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPELEKEIKELAKADG  137 (335)
Q Consensus        82 g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~~~  137 (335)
                      |+.++ ++|        +..+++++.+|.+|.||||+|+..+..   +++++|.+.+
T Consensus        91 ~~~~~~~~L--------l~~g~~~~~~~~~g~t~L~~A~~~~~~---~~v~~Ll~~g  136 (169)
T 2y1l_E           91 GHLEIVEVL--------LKNGADVNANDMEGHTPLHLAAMFGHL---EIVEVLLKNG  136 (169)
T ss_dssp             TCHHHHHHH--------HHTTCCTTCCCTTSCCHHHHHHHTTCH---HHHHHHHHTT
T ss_pred             CCHHHHHHH--------HHcCCCCCCCCCCCCCHHHHHHHcCCH---HHHHHHHHcC
Confidence            99998 888        888999999999999999999987754   7788777754

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A

Probab=99.86  E-value=1.2e-21  Score=161.59  Aligned_cols=123  Identities=11%  Similarity=-0.038  Sum_probs=111.5

Q ss_pred             CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHh
Q 019816            1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAA   80 (335)
Q Consensus         1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~   80 (335)
                      +||||.|+..|+.++++.|++.+++++. +|..|+||||+|+..|+.+++++|+    ..+.+++.+|..|+||||+|+.
T Consensus         4 ~t~L~~A~~~g~~~~v~~ll~~~~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll----~~g~~~~~~~~~g~t~L~~A~~   78 (167)
T 3v31_A            4 SLSVHQLAAQGEMLYLATRIEQENVINH-TDEEGFTPLMWAAAHGQIAVVEFLL----QNGADPQLLGKGRESALSLACS   78 (167)
T ss_dssp             CCCHHHHHHTTCHHHHHHHHHHSSCTTC-CCTTSCCHHHHHHHTTCHHHHHHHH----HTTCCTTCCCTTCCCHHHHHHH
T ss_pred             cchHHHHHHCCCHHHHHHHHHcCCCcCC-CCCCCCCHHHHHHHCCCHHHHHHHH----HcCCCCCCcCCCCCcHHHHHHH
Confidence            5899999999999999999999988755 7999999999999999999999999    4688999999999999999999


Q ss_pred             cCCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhcCCchHHHHHHHHHHcCCC
Q 019816           81 VCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPELEKEIKELAKADGNG  139 (335)
Q Consensus        81 ~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~~~~~  139 (335)
                      .|+.++ ++|        +..+++++.+|..|.||||+|+..+..   ++++.|.+.++.
T Consensus        79 ~~~~~~v~~L--------l~~g~~~~~~~~~g~t~L~~A~~~~~~---~~v~~Ll~~g~~  127 (167)
T 3v31_A           79 KGYTDIVKML--------LDCGVDVNEYDWNGGTPLLYAVHGNHV---KCVKMLLESGAD  127 (167)
T ss_dssp             HTCHHHHHHH--------HHHTCCTTCCCTTSCCHHHHHHHTTCH---HHHHHHHHTTCC
T ss_pred             cCCHHHHHHH--------HHCCCCCCcCCCCCCCHHHHHHHcCCH---HHHHHHHHcCCC
Confidence            999999 888        788999999999999999999988754   778877775543

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A

Probab=99.86  E-value=1.3e-21  Score=162.23  Aligned_cols=120  Identities=12%  Similarity=-0.055  Sum_probs=109.6

Q ss_pred             CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHh
Q 019816            1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAA   80 (335)
Q Consensus         1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~   80 (335)
                      +||||+|+..|+.+++++|++.+++++. +|..|+||||+|+..|+.+++++|+    ..+.+++.+|.+|+||||+|+.
T Consensus        37 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll----~~g~~~~~~~~~g~t~L~~A~~  111 (172)
T 3v30_A           37 FTPLIWASAFGEIETVRFLLEWGADPHI-LAKERESALSLASTGGYTDIVGLLL----ERDVDINIYDWNGGTPLLYAVR  111 (172)
T ss_dssp             CCHHHHHHHTTCHHHHHHHHHHTCCTTC-CCTTCCCHHHHHHHTTCHHHHHHHH----TTTCCTTCCCTTSCCHHHHHHH
T ss_pred             CCHHHHHHHcCCHHHHHHHHHcCCCchh-hcccCCCHHHHHHHCCCHHHHHHHH----HcCCCCCCCCCCCCCHHHHHHH
Confidence            5899999999999999999999999865 7999999999999999999999999    5789999999999999999999


Q ss_pred             cCCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhcCCchHHHHHHHHHHc
Q 019816           81 VCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPELEKEIKELAKAD  136 (335)
Q Consensus        81 ~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~~  136 (335)
                      .|+.++ ++|        +..|++++.+|.+|+||+|+|+..+..   +++++|.+.
T Consensus       112 ~~~~~~v~~L--------l~~ga~~~~~~~~g~t~l~~A~~~~~~---~~~~~L~~~  157 (172)
T 3v30_A          112 GNHVKCVEAL--------LARGADLTTEADSGYTPMDLAVALGYR---KVQQVIENH  157 (172)
T ss_dssp             TTCHHHHHHH--------HHTTCCTTCCCTTSCCHHHHHHHHTCH---HHHHHHHHH
T ss_pred             cCCHHHHHHH--------HHcCCCccccCCCCCCHHHHHHHhCcH---HHHHHHHHH
Confidence            999999 888        888999999999999999999988754   666666553

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A

Probab=99.85  E-value=9.2e-22  Score=164.38  Aligned_cols=133  Identities=20%  Similarity=0.176  Sum_probs=111.2

Q ss_pred             CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHh
Q 019816            1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAA   80 (335)
Q Consensus         1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~   80 (335)
                      .+|||.|+..|+.++++.|++.++......|..|+||||+|+..|+.+++++|+    ..+++++.+|.+|+||||+|+.
T Consensus         6 ~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll----~~g~~~~~~~~~g~t~L~~A~~   81 (179)
T 3f6q_A            6 MDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLI----MRGARINVMNRGDDTPLHLAAS   81 (179)
T ss_dssp             -CCHHHHHHHTCHHHHHHHHHCTTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHH----HTTCCTTCCCTTCCCHHHHHHH
T ss_pred             HHHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCCHHHHHHHcCcHHHHHHHH----HcCCCCCCcCCCCCCHHHHHHH
Confidence            478999999999999999999876655668999999999999999999999999    4688899999999999999999


Q ss_pred             cCCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhcCCchHHHHHHHHHHcC--------CCCCCcchhhh
Q 019816           81 VCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPELEKEIKELAKADG--------NGQYPDGVIKM  148 (335)
Q Consensus        81 ~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~~~--------~~~~p~~~~~~  148 (335)
                      .|+.++ ++|        +..+++++.+|..|.||||+|+..+..   ++++.|.+.+        .|.+|++....
T Consensus        82 ~~~~~~v~~L--------l~~g~~~~~~d~~g~t~L~~A~~~~~~---~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~  147 (179)
T 3f6q_A           82 HGHRDIVQKL--------LQYKADINAVNEHGNVPLHYACFWGQD---QVAEDLVANGALVSICNKYGEMPVDKAKA  147 (179)
T ss_dssp             TTCHHHHHHH--------HHTTCCTTCCCTTSCCHHHHHHHTTCH---HHHHHHHHTTCCSSBCCTTSCCGGGGSCH
T ss_pred             cCCHHHHHHH--------HHcCCCCCccCCCCCCHHHHHHHcCCH---HHHHHHHHCCCCcchhccCCCCcHHHHHH
Confidence            999888 888        788999999999999999999987754   6777777643        34567765543

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A

Probab=99.85  E-value=7.8e-22  Score=161.70  Aligned_cols=130  Identities=13%  Similarity=0.002  Sum_probs=112.4

Q ss_pred             chHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHhc
Q 019816            2 TALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAAV   81 (335)
Q Consensus         2 TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~~   81 (335)
                      ||||.|+..|+.++++.|++.+++++. +|..|+||||+|+. |+.+++++|+    ..+.+++.+|..|+||||+|+..
T Consensus         7 ~~L~~A~~~g~~~~v~~Ll~~~~~~~~-~~~~g~t~L~~A~~-~~~~~v~~Ll----~~g~~~~~~~~~g~t~L~~A~~~   80 (162)
T 1ihb_A            7 NELASAAARGDLEQLTSLLQNNVNVNA-QNGFGRTALQVMKL-GNPEIARRLL----LRGANPDLKDRTGFAVIHDAARA   80 (162)
T ss_dssp             HHHHHHHHHTCHHHHHHHTTSCCCTTC-CCTTSCCHHHHCCS-SCHHHHHHHH----HTTCCTTCCCTTSCCHHHHHHHH
T ss_pred             hHHHHHHHcCCHHHHHHHHhCCCCccc-cCccCccHHHHHHc-CcHHHHHHHH----HcCCCCCCCCCCCCCHHHHHHHc
Confidence            799999999999999999999988855 79999999999999 9999999999    46889999999999999999999


Q ss_pred             CCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhcCCchHHHHHHHHHHcCC---------CCCCcchhhh
Q 019816           82 CPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPELEKEIKELAKADGN---------GQYPDGVIKM  148 (335)
Q Consensus        82 g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~~~~---------~~~p~~~~~~  148 (335)
                      |+.++ ++|        +..+++++.+|.+|+||||+|+..+..   +++++|.+.++         |.+|++....
T Consensus        81 ~~~~~v~~L--------l~~g~~~~~~~~~g~t~L~~A~~~~~~---~~v~~Ll~~g~~~~~~~~~~g~t~l~~A~~  146 (162)
T 1ihb_A           81 GFLDTLQTL--------LEFQADVNIEDNEGNLPLHLAAKEGHL---RVVEFLVKHTASNVGHRNHKGDTACDLARL  146 (162)
T ss_dssp             TCHHHHHHH--------HHTTCCTTCCCTTSCCHHHHHHHTTCH---HHHHHHHHHSCCCTTCCCTTSCCHHHHHHH
T ss_pred             CCHHHHHHH--------HHcCCCCCCcCCCCCCHHHHHHHcCCH---HHHHHHHHccCCCCCCcCCCCCcHHHHHHH
Confidence            99998 888        788999999999999999999987754   67777766433         4466665543

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A

Probab=99.85  E-value=4e-22  Score=163.03  Aligned_cols=122  Identities=14%  Similarity=-0.024  Sum_probs=110.4

Q ss_pred             CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCc-hhHHHH
Q 019816            1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNT-PFHVLA   79 (335)
Q Consensus         1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~T-pLH~Aa   79 (335)
                      .||||+|++.|+.+++++|++++++++. +|..|+||||+|+ .|+.+++++|+    ..++++|.+|..|+| |||+|+
T Consensus        13 ~t~L~~A~~~g~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~-~~~~~~v~~Ll----~~g~~~~~~d~~g~ttpL~~A~   86 (156)
T 1bi7_B           13 ADWLATAAARGRVEEVRALLEAGANPNA-PNSYGRRPIQVMM-MGSARVAELLL----LHGAEPNCADPATLTRPVHDAA   86 (156)
T ss_dssp             TTHHHHHHHHTCHHHHHHHHTTTCCTTC-CCSSSCCTTTSSC-TTCHHHHHHHH----TTTCCCCCCCTTTCCCHHHHHH
T ss_pred             hHHHHHHHHcCCHHHHHHHHHcCCCCCC-CCCCCCCHHHHHH-cCCHHHHHHHH----HcCCCCCCcCCCCCcHHHHHHH
Confidence            5899999999999999999999998865 7999999999985 89999999999    578999999999999 999999


Q ss_pred             hcCCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhcCCchHHHHHHHHHHcCCC
Q 019816           80 AVCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPELEKEIKELAKADGNG  139 (335)
Q Consensus        80 ~~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~~~~~  139 (335)
                      ..|+.++ ++|        +..|++++.+|..|+||||+|+..+..   +++++|.+.|+.
T Consensus        87 ~~~~~~~v~~L--------l~~ga~~~~~d~~g~tpl~~A~~~~~~---~~v~~Ll~~ga~  136 (156)
T 1bi7_B           87 REGFLDTLVVL--------HRAGARLDVRDAWGRLPVDLAEELGHR---DVARYLRAAAGG  136 (156)
T ss_dssp             HHTCHHHHHHH--------HHHTCCSSCCCTTCCCHHHHHHHHTCH---HHHHHHSSCC--
T ss_pred             HCCCHHHHHHH--------HHcCCCCcccCCCCCCHHHHHHHhCHH---HHHHHHHHcCCC
Confidence            9999999 888        888999999999999999999987754   888888877665

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}

Probab=99.85  E-value=9.7e-22  Score=166.02  Aligned_cols=123  Identities=15%  Similarity=0.044  Sum_probs=111.6

Q ss_pred             CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHh
Q 019816            1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAA   80 (335)
Q Consensus         1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~   80 (335)
                      +||||+|+..|+.++++.|++.++++.. .|..|+||||+|+..|+.+++++|+    ..+.+++.+|.+|+||||+|+.
T Consensus        36 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll----~~g~~~~~~~~~g~t~L~~A~~  110 (192)
T 2rfm_A           36 RTPLMVACMLGMENAIDKLVENFDKLED-KDIEGSTALIWAVKNNRLGIAEKLL----SKGSNVNTKDFSGKTPLMWSII  110 (192)
T ss_dssp             CCHHHHHHHHTCGGGHHHHHHHHCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHH----HHTCCTTCCCTTSCCHHHHHHH
T ss_pred             CCHHHHHHHcCCHHHHHHHHHhcccccc-ccccCccHHHHHHHcCCHHHHHHHH----HCCCCCCCCCCCCCcHHHHHHH
Confidence            5999999999999999999999998855 7999999999999999999999999    4688999999999999999999


Q ss_pred             cCCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhcCCchHHHHHHHHHHcCCC
Q 019816           81 VCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPELEKEIKELAKADGNG  139 (335)
Q Consensus        81 ~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~~~~~  139 (335)
                      .|+.++ ++|        +..+++++.+|..|.||||+|+..+..   +++++|.+.++.
T Consensus       111 ~~~~~~v~~L--------l~~g~~~~~~~~~g~t~L~~A~~~~~~---~~v~~Ll~~ga~  159 (192)
T 2rfm_A          111 FGYSEMSYFL--------LEHGANVNDRNLEGETPLIVASKYGRS---EIVKKLLELGAD  159 (192)
T ss_dssp             HTCHHHHHHH--------HHTTCCSSCCCTTCCCHHHHHHHHTCH---HHHHHHHHTTCC
T ss_pred             cCCHHHHHHH--------HHCCCCCCCCCCCCCCHHHHHHHcCCH---HHHHHHHHCCCC
Confidence            999999 888        788999999999999999999987754   788888776544

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1

Probab=99.85  E-value=2.6e-21  Score=157.46  Aligned_cols=117  Identities=16%  Similarity=0.022  Sum_probs=107.4

Q ss_pred             CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHh
Q 019816            1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAA   80 (335)
Q Consensus         1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~   80 (335)
                      +||||+|+..|+.+++++|++.+++++. +|..|+||||+|+..|+.+++++|+    ..+.+++.+|.+|+||||+|+.
T Consensus        35 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll----~~g~~~~~~~~~g~t~L~~A~~  109 (153)
T 1awc_B           35 TSPLHLAAQYGHFSTTEVLLRAGVSRDA-RTKVDRTPLHMAASEGHANIVEVLL----KHGADVNAKDMLKMTALHWATE  109 (153)
T ss_dssp             CCHHHHHHHHTCHHHHHHHHTTTCCTTC-CCTTCCCHHHHHHHHTCHHHHHHHH----TTTCCTTCCCTTSCCHHHHHHH
T ss_pred             CCHHHHHHHcCCHHHHHHHHHcCCCCCC-CCCCCCCHHHHHHHcChHHHHHHHH----HcCCCCCCCCCCCCCHHHHHHH
Confidence            5899999999999999999999998865 7999999999999999999999999    5789999999999999999999


Q ss_pred             cCCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhcCCchHHHHHHHH
Q 019816           81 VCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPELEKEIKELA  133 (335)
Q Consensus        81 ~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l  133 (335)
                      .|+.++ ++|        +..|++++.+|..|+||+|+|+..+..   +++++|
T Consensus       110 ~~~~~~v~~L--------l~~ga~~~~~~~~g~t~l~~A~~~~~~---~i~~~L  152 (153)
T 1awc_B          110 HNHQEVVELL--------IKYGADVHTQSKFCKTAFDISIDNGNE---DLAEIL  152 (153)
T ss_dssp             TTCHHHHHHH--------HHTTCCTTCCCTTSCCHHHHHHHTTCH---HHHHHH
T ss_pred             cCCHHHHHHH--------HHcCCCccccCCCCCCHHHHHHHcCCH---HHHHHh
Confidence            999999 888        888999999999999999999988754   555554

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}

Probab=99.85  E-value=1.6e-21  Score=164.73  Aligned_cols=119  Identities=15%  Similarity=0.067  Sum_probs=109.1

Q ss_pred             CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHh
Q 019816            1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAA   80 (335)
Q Consensus         1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~   80 (335)
                      +||||+|+..|+.+++++|++.++++.. +|..|+||||+|+..|+.+++++|+    ..+++++.+|.+|+||||+|+.
T Consensus        69 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll----~~g~~~~~~~~~g~t~L~~A~~  143 (192)
T 2rfm_A           69 STALIWAVKNNRLGIAEKLLSKGSNVNT-KDFSGKTPLMWSIIFGYSEMSYFLL----EHGANVNDRNLEGETPLIVASK  143 (192)
T ss_dssp             CCHHHHHHHTTCHHHHHHHHHHTCCTTC-CCTTSCCHHHHHHHHTCHHHHHHHH----HTTCCSSCCCTTCCCHHHHHHH
T ss_pred             ccHHHHHHHcCCHHHHHHHHHCCCCCCC-CCCCCCcHHHHHHHcCCHHHHHHHH----HCCCCCCCCCCCCCCHHHHHHH
Confidence            5899999999999999999999998865 7999999999999999999999999    5789999999999999999999


Q ss_pred             cCCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhcCCchHHHHHHHHHH
Q 019816           81 VCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPELEKEIKELAKA  135 (335)
Q Consensus        81 ~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~  135 (335)
                      .|+.++ ++|        +..|++++.+|..|.||+|+|+..+..   +++++|.+
T Consensus       144 ~~~~~~v~~L--------l~~ga~~~~~~~~g~t~l~~A~~~~~~---~~v~~Ll~  188 (192)
T 2rfm_A          144 YGRSEIVKKL--------LELGADISARDLTGLTAEASARIFGRQ---EVIKIFTE  188 (192)
T ss_dssp             HTCHHHHHHH--------HHTTCCTTCBCTTSCBHHHHHHHTTCH---HHHHHHHH
T ss_pred             cCCHHHHHHH--------HHCCCCCCCcCCCCCCHHHHHHHhCcH---HHHHHHHh
Confidence            999999 888        788999999999999999999988754   66666654

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A

Probab=99.85  E-value=2.8e-21  Score=159.37  Aligned_cols=119  Identities=14%  Similarity=-0.005  Sum_probs=108.1

Q ss_pred             CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHh
Q 019816            1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAA   80 (335)
Q Consensus         1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~   80 (335)
                      +||||+|+..|+.+++++|++.++++.. .|..|+||||+|+..|+.+++++|+    ..+.+++.+|.+|+||||+|+.
T Consensus        37 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll----~~g~~~~~~~~~g~t~L~~A~~  111 (167)
T 3v31_A           37 FTPLMWAAAHGQIAVVEFLLQNGADPQL-LGKGRESALSLACSKGYTDIVKMLL----DCGVDVNEYDWNGGTPLLYAVH  111 (167)
T ss_dssp             CCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTCCCHHHHHHHHTCHHHHHHHH----HHTCCTTCCCTTSCCHHHHHHH
T ss_pred             CCHHHHHHHCCCHHHHHHHHHcCCCCCC-cCCCCCcHHHHHHHcCCHHHHHHHH----HCCCCCCcCCCCCCCHHHHHHH
Confidence            5899999999999999999999998865 7999999999999999999999999    5788999999999999999999


Q ss_pred             cCCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhcCCchHHHHHHHHHH
Q 019816           81 VCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPELEKEIKELAKA  135 (335)
Q Consensus        81 ~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~  135 (335)
                      .|+.++ ++|        +..|++++.+|.+|+||+|+|+..+..   ++++.|.+
T Consensus       112 ~~~~~~v~~L--------l~~g~~~~~~~~~g~t~l~~A~~~~~~---~~~~~L~~  156 (167)
T 3v31_A          112 GNHVKCVKML--------LESGADPTIETDSGYNSMDLAVALGYR---SVQQVIES  156 (167)
T ss_dssp             TTCHHHHHHH--------HHTTCCTTCCCTTSCCHHHHHHHHTCH---HHHHHHHH
T ss_pred             cCCHHHHHHH--------HHcCCCCCCcCCCCCCHHHHHHHcCcH---HHHHHHHH
Confidence            999999 888        788999999999999999999987754   55555544

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A

Probab=99.84  E-value=4.2e-21  Score=160.35  Aligned_cols=123  Identities=20%  Similarity=0.167  Sum_probs=113.6

Q ss_pred             CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHh
Q 019816            1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAA   80 (335)
Q Consensus         1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~   80 (335)
                      +||||+|+..|+.+++++|++.+++++. +|..|+||||+|+..|+.+++++|+    ..++++|.+|.+|+||||+|+.
T Consensus        40 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll----~~g~~~~~~d~~g~t~L~~A~~  114 (179)
T 3f6q_A           40 FSPLHWACREGRSAVVEMLIMRGARINV-MNRGDDTPLHLAASHGHRDIVQKLL----QYKADINAVNEHGNVPLHYACF  114 (179)
T ss_dssp             CCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTCCCHHHHHHHTTCHHHHHHHH----HTTCCTTCCCTTSCCHHHHHHH
T ss_pred             CCHHHHHHHcCcHHHHHHHHHcCCCCCC-cCCCCCCHHHHHHHcCCHHHHHHHH----HcCCCCCccCCCCCCHHHHHHH
Confidence            5899999999999999999999999865 7999999999999999999999999    5789999999999999999999


Q ss_pred             cCCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhcCCchHHHHHHHHHHcCCC
Q 019816           81 VCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPELEKEIKELAKADGNG  139 (335)
Q Consensus        81 ~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~~~~~  139 (335)
                      .|+.++ ++|        +..|++++.+|.+|+||+++|+..+   ..++++.|.+.++.
T Consensus       115 ~~~~~~v~~L--------l~~ga~~~~~~~~g~tpl~~A~~~~---~~~~~~~L~~~g~~  163 (179)
T 3f6q_A          115 WGQDQVAEDL--------VANGALVSICNKYGEMPVDKAKAPL---RELLRERAEKMGQN  163 (179)
T ss_dssp             TTCHHHHHHH--------HHTTCCSSBCCTTSCCGGGGSCHHH---HHHHHHHHHHTTCC
T ss_pred             cCCHHHHHHH--------HHCCCCcchhccCCCCcHHHHHHHH---HHHHHHHHHHhhcC
Confidence            999998 888        8889999999999999999998765   45888888887766

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A

Probab=99.84  E-value=8.8e-22  Score=170.23  Aligned_cols=123  Identities=15%  Similarity=0.033  Sum_probs=106.2

Q ss_pred             CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcc-cccccccCCCCCchhHHHH
Q 019816            1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVV-KNLIFEKDVKGNTPFHVLA   79 (335)
Q Consensus         1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~-~~~~n~~d~~G~TpLH~Aa   79 (335)
                      +||||+||..|+.++++.|++.+++++. +|..|+||||+|+.+|+.+++++|+    .. ++++|.+|.+|+||||+|+
T Consensus        74 ~t~L~~A~~~g~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll----~~~g~~~~~~d~~g~tpL~~A~  148 (222)
T 3ehr_A           74 DNPLHEAAKRGNLSWLRECLDNRVGVNG-LDKAGSTALYWACHGGHKDIVEMLF----TQPNIELNQQNKLGDTALHAAA  148 (222)
T ss_dssp             SCHHHHHHHHTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHT----TSTTCCCCCCCTTSCCHHHHHH
T ss_pred             ccccccccccCcHHHHHHHHhCCCCccc-cCCCCCCHHHHHHHcCCHHHHHHHH----cCCCCCccccCCCCCCHHHHHH
Confidence            5899999999999999999999998865 7999999999999999999999999    44 8899999999999999999


Q ss_pred             hcCCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhcCCchHHHHHHHHHHcCCC
Q 019816           80 AVCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPELEKEIKELAKADGNG  139 (335)
Q Consensus        80 ~~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~~~~~  139 (335)
                      ..|+.++ ++|        +..|++++.+|.+|+||+|+|+..+   ..++++.+.+.++.
T Consensus       149 ~~~~~~~v~~L--------l~~ga~~~~~~~~g~t~l~~A~~~~---~~~~l~~l~~~~~~  198 (222)
T 3ehr_A          149 WKGYADIVQLL--------LAKGARTDLRNIEKKLAFDMATNAA---CASLLKKKQGTDAV  198 (222)
T ss_dssp             HHTCHHHHHHH--------HHHTCCSCCCCTTSCCHHHHCCSHH---HHHHHC--------
T ss_pred             HcCCHHHHHHH--------HHcCCCCccccCCCCCHHHHhcchh---HHHHHHHHhccchh
Confidence            9999999 888        8889999999999999999999654   55777777665544

>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*

Probab=99.84  E-value=6.1e-21  Score=157.05  Aligned_cols=121  Identities=20%  Similarity=0.114  Sum_probs=109.2

Q ss_pred             CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHh
Q 019816            1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAA   80 (335)
Q Consensus         1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~   80 (335)
                      +||||+|+..|+.+++++|++++++++. +|.+|+||||+|+..|+.+++++|+    ..++++|.+|.+|+||||+|+.
T Consensus        43 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll----~~g~~~~~~~~~g~t~L~~A~~  117 (165)
T 3twr_A           43 STPLHFAAGYNRVSVVEYLLQHGADVHA-KDKGGLVPLHNACSYGHYEVAELLV----KHGAVVNVADLWKFTPLHEAAA  117 (165)
T ss_dssp             CCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHH----HTTCCTTCCCTTCCCHHHHHHH
T ss_pred             CCHHHHHHHcChHHHHHHHHhcCCCCCc-cCCCCCCHHHHHHHcCcHHHHHHHH----hCCCCCCCcCCCCCCHHHHHHH
Confidence            4999999999999999999999999865 7999999999999999999999999    5789999999999999999999


Q ss_pred             cCCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhcCCchHHHHHHHHHHcCC
Q 019816           81 VCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPELEKEIKELAKADGN  138 (335)
Q Consensus        81 ~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~~~~  138 (335)
                      .|+.++ ++|        +..|++++.+|.+|+||+|+|.. +.   .+++++|.++++
T Consensus       118 ~~~~~~v~~L--------l~~ga~~~~~~~~g~t~l~~a~~-~~---~~i~~~L~~~gA  164 (165)
T 3twr_A          118 KGKYEICKLL--------LQHGADPTKKNRDGNTPLDLVKD-GD---TDIQDLLRGDAA  164 (165)
T ss_dssp             TTCHHHHHHH--------HHTTCCTTCCCTTSCCTGGGSCT-TC---HHHHHHHHTC--
T ss_pred             cCCHHHHHHH--------HHcCCCCcccCCCCCChhHhHhc-CC---hHHHHHHhhccc
Confidence            999999 888        88899999999999999999887 32   378888876553

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B

Probab=99.84  E-value=4.5e-21  Score=156.21  Aligned_cols=131  Identities=16%  Similarity=0.039  Sum_probs=108.0

Q ss_pred             chHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHhc
Q 019816            2 TALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAAV   81 (335)
Q Consensus         2 TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~~   81 (335)
                      ||||.|+..|+.++++.|++..+......|..|+||||+ +..|+.++++.|+    ..|.+++.+|.+|+||||+|+..
T Consensus         4 ~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll----~~g~~~~~~~~~g~t~L~~A~~~   78 (156)
T 1bd8_A            4 DRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQV-MMFGSTAIALELL----KQGASPNVQDTSGTSPVHDAART   78 (156)
T ss_dssp             HHHHHHHHHTCHHHHHHHHHTTCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHH----HTTCCTTCCCTTSCCHHHHHHHT
T ss_pred             hHHHHHHHhCCHHHHHHHHHhhCcCccccCCCCCcHHHH-HHcCCHHHHHHHH----HCCCCCCCcCCCCCCHHHHHHHc
Confidence            799999999999999999988332334478899999999 9999999999999    46888999999999999999999


Q ss_pred             CCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhcCCchHHHHHHHHHH-------cCCCCCCcchhhh
Q 019816           82 CPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPELEKEIKELAKA-------DGNGQYPDGVIKM  148 (335)
Q Consensus        82 g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~-------~~~~~~p~~~~~~  148 (335)
                      |+.++ ++|        +..|++++.+|.+|+||||+|+..+..   +++++|.+       +..|.+|++....
T Consensus        79 ~~~~~v~~L--------l~~g~~~~~~~~~g~t~L~~A~~~~~~---~~v~~Ll~~~~~~~~~~~g~t~l~~A~~  142 (156)
T 1bd8_A           79 GFLDTLKVL--------VEHGADVNVPDGTGALPIHLAVQEGHT---AVVSFLAAESDLHRRDARGLTPLELALQ  142 (156)
T ss_dssp             TCHHHHHHH--------HHTTCCSCCCCTTSCCHHHHHHHHTCH---HHHHHHHTTSCTTCCCTTSCCHHHHHHH
T ss_pred             CcHHHHHHH--------HHcCCCCCCcCCCCCcHHHHHHHhChH---HHHHHHHhccCCCCcCCCCCCHHHHHHH
Confidence            99988 888        788999999999999999999977753   66666654       2345567766543

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A

Probab=99.84  E-value=2.5e-21  Score=158.64  Aligned_cols=122  Identities=23%  Similarity=0.189  Sum_probs=109.9

Q ss_pred             CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHh
Q 019816            1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAA   80 (335)
Q Consensus         1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~   80 (335)
                      +||||+|+. |+.+++++|++.+++++. +|..|+||||+|+..|+.+++++|+    ..+.++|.+|.+|+||||+|+.
T Consensus        39 ~t~L~~A~~-~~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll----~~g~~~~~~~~~g~t~L~~A~~  112 (162)
T 1ihb_A           39 RTALQVMKL-GNPEIARRLLLRGANPDL-KDRTGFAVIHDAARAGFLDTLQTLL----EFQADVNIEDNEGNLPLHLAAK  112 (162)
T ss_dssp             CCHHHHCCS-SCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHHTCHHHHHHHH----HTTCCTTCCCTTSCCHHHHHHH
T ss_pred             ccHHHHHHc-CcHHHHHHHHHcCCCCCC-CCCCCCCHHHHHHHcCCHHHHHHHH----HcCCCCCCcCCCCCCHHHHHHH
Confidence            589999999 999999999999998865 7999999999999999999999999    5788999999999999999999


Q ss_pred             cCCCCc-ccccccCcccccccccc-cccccCCCCCHHHHHHhcCCchHHHHHHHHHHcCCC
Q 019816           81 VCPDPR-PYNAGYGIIPYKIAKGY-YQAVNKQNISVEHINRYGFPELEKEIKELAKADGNG  139 (335)
Q Consensus        81 ~g~~~~-~lL~~~~~~~~~~~~~~-~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~~~~~  139 (335)
                      .|+.++ ++|        +..+.+ ++.+|..|+||+|+|+..+..   +++++|.++|++
T Consensus       113 ~~~~~~v~~L--------l~~g~~~~~~~~~~g~t~l~~A~~~~~~---~~~~~Ll~~GAd  162 (162)
T 1ihb_A          113 EGHLRVVEFL--------VKHTASNVGHRNHKGDTACDLARLYGRN---EVVSLMQANGAG  162 (162)
T ss_dssp             TTCHHHHHHH--------HHHSCCCTTCCCTTSCCHHHHHHHTTCH---HHHHHHHHTC--
T ss_pred             cCCHHHHHHH--------HHccCCCCCCcCCCCCcHHHHHHHcCCH---HHHHHHHHhCCC
Confidence            999999 888        777877 699999999999999988754   888888887753

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*

Probab=99.84  E-value=6.5e-21  Score=157.80  Aligned_cols=120  Identities=23%  Similarity=0.160  Sum_probs=109.9

Q ss_pred             CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHh
Q 019816            1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAA   80 (335)
Q Consensus         1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~   80 (335)
                      +||||+|+..|+.+++++|+++++++.. .|..|+||||+|+..|+.+++++|+    ..+++++.+|.+|+||||+|+.
T Consensus        48 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~~~~Ll----~~g~~~~~~~~~g~t~L~~A~~  122 (169)
T 2y1l_E           48 WTPLHLAAFNGHLEIVEVLLKNGADVNA-VDHAGMTPLRLAALFGHLEIVEVLL----KNGADVNANDMEGHTPLHLAAM  122 (169)
T ss_dssp             CCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHH----HTTCCTTCCCTTSCCHHHHHHH
T ss_pred             CCHHHHHHHcCCHHHHHHHHHcCCCCCc-cCCCCCCHHHHHHHcCCHHHHHHHH----HcCCCCCCCCCCCCCHHHHHHH
Confidence            5899999999999999999999998855 7999999999999999999999999    5788999999999999999999


Q ss_pred             cCCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhcCCchHHHHHHHHHHc
Q 019816           81 VCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPELEKEIKELAKAD  136 (335)
Q Consensus        81 ~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~~  136 (335)
                      .|+.++ ++|        +..|++++.+|..|.||+|+|+..+..   +++++|.+.
T Consensus       123 ~~~~~~v~~L--------l~~g~~~~~~~~~g~t~l~~A~~~~~~---~~~~~L~~~  168 (169)
T 2y1l_E          123 FGHLEIVEVL--------LKNGADVNAQDKFGKTAFDISIDNGNE---DLAEILQKL  168 (169)
T ss_dssp             TTCHHHHHHH--------HHTTCCTTCCCTTSCCHHHHHHHTTCH---HHHHHHHTC
T ss_pred             cCCHHHHHHH--------HHcCCCCCCcCCCCCCHHHHHHHhCCH---HHHHHHHHc
Confidence            999999 888        888999999999999999999988754   677777653

>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}

Probab=99.84  E-value=6.3e-21  Score=165.54  Aligned_cols=127  Identities=20%  Similarity=0.147  Sum_probs=89.1

Q ss_pred             CchHhHHHhcCCHHHHHHHhhhCCCcc----ccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCC-------
Q 019816            1 MTALHLAAGQGNDWIVQEIIQRCPECC----ELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDV-------   69 (335)
Q Consensus         1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~----~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~-------   69 (335)
                      +||||+|+..|+.+++++|++.+++..    ...|.+|+||||+|+..|+.+++++|+    ..+++++.+|.       
T Consensus        38 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll----~~g~~~~~~~~~~~~~~~  113 (232)
T 2rfa_A           38 ETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHIAVINQNVNLVRALL----ARGASVSARATGSVFHYR  113 (232)
T ss_dssp             CCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHH----HTTCCTTCCCCSGGGSCC
T ss_pred             CCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHHHHHHHcCCHHHHHHHH----hCCCCCCcccCCcceeec
Confidence            467777777777777777777776642    224567777777777777777777777    34556665544       


Q ss_pred             ------CCCchhHHHHhcCCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhcCCc-hHHHHHHHHHHcCCC
Q 019816           70 ------KGNTPFHVLAAVCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPE-LEKEIKELAKADGNG  139 (335)
Q Consensus        70 ------~G~TpLH~Aa~~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~~-~~~~i~~~l~~~~~~  139 (335)
                            +|+||||+|+..|+.++ ++|        +..|++++.+|.+|+||||+|+..+.. ...+++++|.+.++.
T Consensus       114 ~~~~~~~g~t~L~~A~~~~~~~~v~~L--------l~~ga~~~~~d~~g~t~L~~A~~~~~~~~~~~i~~~Ll~~g~~  183 (232)
T 2rfa_A          114 PHNLIYYGEHPLSFAACVGSEEIVRLL--------IEHGADIRAQDSLGNTVLHILILQPNKTFACQMYNLLLSYDGG  183 (232)
T ss_dssp             TTCSCCCCSSHHHHHHHHTCHHHHHHH--------HHTTCCTTCCCTTSCCHHHHHHTCSCHHHHHHHHHHHHHTTCS
T ss_pred             ccccccCCCCHHHHHHHcCCHHHHHHH--------HHCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHHHHHhcCCc
Confidence                  68888888888887777 777        677888888888888888888866653 234566777776553

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}

Probab=99.84  E-value=3.7e-21  Score=162.41  Aligned_cols=111  Identities=11%  Similarity=-0.090  Sum_probs=81.7

Q ss_pred             CchHhHHHhcCCH----HHHHHHhhhCCCccccccCCCCchHHHHHhcCC------HhHHHHHHhcCCcccccccccCCC
Q 019816            1 MTALHLAAGQGND----WIVQEIIQRCPECCELVDDRGWNVLHFAMVSFD------KSDLKHLLNEYPVVKNLIFEKDVK   70 (335)
Q Consensus         1 ~TpLH~Aa~~G~~----e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~------~~~v~~Ll~~~~~~~~~~n~~d~~   70 (335)
                      +||||+|+..|+.    +++++|+++|++++. +|.+|+||||+|+..++      .+++++|+    ..|+++|.+|.+
T Consensus        39 ~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~-~d~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll----~~Gadin~~d~~  113 (186)
T 3t8k_A           39 SNILYDVLRNNNDEARYKISMFLINKGADIKS-RTKEGTTLFFPLFQGGGNDITGTTELCKIFL----EKGADITALYKP  113 (186)
T ss_dssp             TTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSC-CCTTCCCTHHHHHHHCTTCHHHHHHHHHHHH----HTTCCSSSCBGG
T ss_pred             CCHHHHHHHcCCcchHHHHHHHHHHCCCCCCC-CCCCCCcHHHHHHHcCCcchhhHHHHHHHHH----HCCCCCCccCCC
Confidence            4788888888764    478888888887755 67788888888887776      35677777    467788888888


Q ss_pred             CC-chhHHHHhcCCCC-----c-ccccccCcccccc-cccccccccCCCCCHHHHHHhcCCc
Q 019816           71 GN-TPFHVLAAVCPDP-----R-PYNAGYGIIPYKI-AKGYYQAVNKQNISVEHINRYGFPE  124 (335)
Q Consensus        71 G~-TpLH~Aa~~g~~~-----~-~lL~~~~~~~~~~-~~~~~~~~n~~G~Tpl~~a~~~~~~  124 (335)
                      |+ ||||+|+..+...     + ++|        +. .|++++.+|+.|+||||+|++.+..
T Consensus       114 g~ttpLh~A~~~~~~~~~~~~iv~~L--------l~~~gad~~~~d~~G~TpL~~A~~~~~~  167 (186)
T 3t8k_A          114 YKIVVFKNIFNYFVDENEMIPLYKLI--------FSQSGLQLLIKDKWGLTALEFVKRCQKP  167 (186)
T ss_dssp             GTBCTTGGGGGCCSCHHHHHHHHHHH--------HTSTTCCTTCCCTTSCCHHHHHHTTTCH
T ss_pred             cCchHHHHHHHcCCChhhHHHHHHHH--------HHhcCCCCcccCCCCCCHHHHHHHcCCH
Confidence            88 8888887754432     3 455        55 7888888888888888888876654

>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*

Probab=99.84  E-value=3.5e-21  Score=170.17  Aligned_cols=125  Identities=17%  Similarity=0.091  Sum_probs=107.5

Q ss_pred             CchHhHHHhcCCHHHHHHHhhhCCCcccccc--------------CCCCchHHHHHhcCCHhHHHHHHhcCCcccccccc
Q 019816            1 MTALHLAAGQGNDWIVQEIIQRCPECCELVD--------------DRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFE   66 (335)
Q Consensus         1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d--------------~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~   66 (335)
                      +||||+|+..|+.++++.|++++++++. +|              ..|+||||+|+..|+.+++++|++. ...++++|.
T Consensus        94 ~t~L~~A~~~g~~~~v~~Ll~~ga~~~~-~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~-~~~ga~~~~  171 (260)
T 3jxi_A           94 QTALHIAIERRCKHYVELLVEKGADVHA-QARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTEN-GHKQADLRR  171 (260)
T ss_dssp             BCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHC-SSCCCCTTC
T ss_pred             CCHHHHHHHcCCHHHHHHHHhCCCCcCc-cccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhc-cccCCCCcc
Confidence            4899999999999999999999999866 55              6899999999999999999999921 017899999


Q ss_pred             cCCCCCchhHHHHhcCCC---------Cc-ccccccCccccccccccc-------ccccCCCCCHHHHHHhcCCchHHHH
Q 019816           67 KDVKGNTPFHVLAAVCPD---------PR-PYNAGYGIIPYKIAKGYY-------QAVNKQNISVEHINRYGFPELEKEI  129 (335)
Q Consensus        67 ~d~~G~TpLH~Aa~~g~~---------~~-~lL~~~~~~~~~~~~~~~-------~~~n~~G~Tpl~~a~~~~~~~~~~i  129 (335)
                      +|.+|+||||+|+..++.         ++ ++|        +..|+++       +.+|.+|+||||+|+..+..   ++
T Consensus       172 ~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~L--------l~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~---~~  240 (260)
T 3jxi_A          172 QDSRGNTVLHALVAIADNTRENTKFVTKMYDLL--------LIKCAKLFPDTNLEALLNNDGLSPLMMAAKTGKI---GI  240 (260)
T ss_dssp             CCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHH--------HHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCH---HH
T ss_pred             cCCCCCcHHHHHHHhccCchhHHHHHHHHHHHH--------HHhCcccccccchhhcccCCCCCHHHHHHHcCCH---HH
Confidence            999999999999998873         45 677        7888888       78999999999999988854   77


Q ss_pred             HHHHHHcCC
Q 019816          130 KELAKADGN  138 (335)
Q Consensus       130 ~~~l~~~~~  138 (335)
                      ++.|.+++.
T Consensus       241 v~~Ll~~g~  249 (260)
T 3jxi_A          241 FQHIIRREI  249 (260)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHhCC
Confidence            777776543

>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A

Probab=99.83  E-value=4.1e-21  Score=169.45  Aligned_cols=125  Identities=17%  Similarity=0.040  Sum_probs=107.9

Q ss_pred             CchHhHHHhcCCHHHHHHHhhhCCCccccccCC-------------CCchHHHHHhcCCHhHHHHHHhcCCccccccccc
Q 019816            1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDR-------------GWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEK   67 (335)
Q Consensus         1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~-------------G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~   67 (335)
                      +||||+|+..|+.++++.|++++++++. +|..             |+||||+|+..|+.+++++|++. ...|+++|.+
T Consensus        91 ~t~L~~A~~~g~~~~v~~Ll~~ga~~~~-~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~-~~~ga~~n~~  168 (256)
T 2etb_A           91 HSALHIAIEKRSLQCVKLLVENGADVHL-RACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLEN-PHQPASLEAT  168 (256)
T ss_dssp             CCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHC-SSCCCCTTCC
T ss_pred             CCHHHHHHHcCCHHHHHHHHHcCCCCCc-ccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhc-cccCCCcCcc
Confidence            5999999999999999999999999865 5665             99999999999999999999921 1178999999


Q ss_pred             CCCCCchhHHHHh--cCCCC-------c-ccccccCccccccccccc-------ccccCCCCCHHHHHHhcCCchHHHHH
Q 019816           68 DVKGNTPFHVLAA--VCPDP-------R-PYNAGYGIIPYKIAKGYY-------QAVNKQNISVEHINRYGFPELEKEIK  130 (335)
Q Consensus        68 d~~G~TpLH~Aa~--~g~~~-------~-~lL~~~~~~~~~~~~~~~-------~~~n~~G~Tpl~~a~~~~~~~~~~i~  130 (335)
                      |.+|+||||+|+.  .++.+       + ++|        +..|+++       +.+|.+|+||||+|+..+..   +++
T Consensus       169 d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~L--------l~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~---~~v  237 (256)
T 2etb_A          169 DSLGNTVLHALVMIADNSPENSALVIHMYDGL--------LQMGARLCPTVQLEEISNHQGLTPLKLAAKEGKI---EIF  237 (256)
T ss_dssp             CTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHH--------HHHHHHHSTTCCGGGCCCTTSCCHHHHHHHTTCH---HHH
T ss_pred             CCCCCCHHHHHHHcccCCchhhHHHHHHHHHH--------HHcCCCcccccccccccCCCCCCHHHHHHHhCCH---HHH
Confidence            9999999999999  56665       7 777        8889999       99999999999999988754   777


Q ss_pred             HHHHHcCC
Q 019816          131 ELAKADGN  138 (335)
Q Consensus       131 ~~l~~~~~  138 (335)
                      ++|.+++.
T Consensus       238 ~~Ll~~g~  245 (256)
T 2etb_A          238 RHILQREF  245 (256)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHhCCC
Confidence            77766443

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A

Probab=99.83  E-value=1.6e-20  Score=161.87  Aligned_cols=122  Identities=16%  Similarity=0.003  Sum_probs=104.6

Q ss_pred             CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHh
Q 019816            1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAA   80 (335)
Q Consensus         1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~   80 (335)
                      +||||+|+..|+.+++++|++.++......|..|+||||+|+..|+.++++.|+    ..+.+++.+|.+|+||||+|+.
T Consensus        59 ~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll----~~g~~~~~~~~~g~t~L~~A~~  134 (223)
T 2f8y_A           59 RTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLI----NSHADVNAVDDLGKSALHWAAA  134 (223)
T ss_dssp             CCHHHHHHHTTCHHHHHHHHHBTTSCTTCCCTTCCCHHHHHHHHTCHHHHHHHH----HTTCCTTCBCTTSCBHHHHHHH
T ss_pred             CCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCcHHHHHHHhCcHHHHHHHH----HcCCCCcCcCCCCCcHHHHHHH
Confidence            589999999999999999999888544557889999999999999999999999    4678899999999999999999


Q ss_pred             cCCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhcCCchHHHHHHHHHHcC
Q 019816           81 VCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPELEKEIKELAKADG  137 (335)
Q Consensus        81 ~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~~~  137 (335)
                      .|+.++ ++|        +..+++++.+|..|.||+|+|+..+..   +++++|.+.+
T Consensus       135 ~~~~~~v~~L--------l~~g~~~~~~~~~g~t~L~~A~~~~~~---~~v~~Ll~~g  181 (223)
T 2f8y_A          135 VNNVDAAVVL--------LKNGANKDMQNNREETPLFLAAREGSY---ETAKVLLDHF  181 (223)
T ss_dssp             TTCHHHHHHH--------HHTTCCTTCCCTTCCCHHHHHHHHTCH---HHHHHHHHTT
T ss_pred             cCCHHHHHHH--------HHcCCCCCCcCCCCcCHHHHHHHcCCH---HHHHHHHHcC
Confidence            999888 777        778899999999999999999977744   6777777644

>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}

Probab=99.83  E-value=4e-21  Score=171.61  Aligned_cols=120  Identities=19%  Similarity=0.110  Sum_probs=106.3

Q ss_pred             CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHh
Q 019816            1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAA   80 (335)
Q Consensus         1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~   80 (335)
                      +||+|+|+..|+.++++.|++.+++++. +|..|+||||+|+..|+.+++++|+    ..|+++|.+|.+|+||||+|+.
T Consensus       120 ~t~l~~a~~~~~~~~~~~Ll~~g~~~n~-~d~~g~TpL~~A~~~g~~~~v~~Ll----~~gadvn~~~~~g~t~Lh~A~~  194 (269)
T 4b93_B          120 AVPLHLACQQGHFQVVKCLLDSNAKPNK-KDLSGNTPLIYACSGGHHELVALLL----QHGASINASNNKGNTALHEAVI  194 (269)
T ss_dssp             CCHHHHHHHHTCHHHHHHHHHTTCCSCC-CCTTCCCHHHHHHHTTCGGGHHHHH----HTTCCTTCBCTTSCBHHHHHHH
T ss_pred             CCccccccccChHHHHHHHHHCCCCCCC-CCCCCCCHHHHHHHCCCHHHHHHHH----HCCCCCCccccCCCcHHHHHHH
Confidence            5899999999999999999999999865 7999999999999999999999999    5789999999999999999999


Q ss_pred             cCCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhcCCchHHHHHHHHHH
Q 019816           81 VCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPELEKEIKELAKA  135 (335)
Q Consensus        81 ~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~  135 (335)
                      .|+.++ ++|        +..|+|++.+|++|+||||+|++++ + ..++++.+..
T Consensus       195 ~g~~~~v~~L--------l~~Gad~~~~d~~G~TpL~~A~~~~-~-i~~lL~~l~~  240 (269)
T 4b93_B          195 EKHVFVVELL--------LLHGASVQVLNKRQRTAVDCAEQNS-K-IMELLQVVPS  240 (269)
T ss_dssp             TTCHHHHHHH--------HHTTCCSCCCCTTSCCSGGGSCTTC-H-HHHHTTC---
T ss_pred             cCCHHHHHHH--------HHCCCCCCCcCCCCCCHHHHHHhCC-c-HHHHHHHHHH
Confidence            999999 888        8899999999999999999998765 2 2344444443

>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*

Probab=99.83  E-value=7.5e-21  Score=169.48  Aligned_cols=126  Identities=18%  Similarity=0.117  Sum_probs=109.4

Q ss_pred             CchHhHHHhcCCHHHHHHHhhhCCCccccccC--------------CCCchHHHHHhcCCHhHHHHHHhcCCcccccccc
Q 019816            1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDD--------------RGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFE   66 (335)
Q Consensus         1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~--------------~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~   66 (335)
                      +||||+|+..|+.+++++|++++++++. +|.              .|+||||+|+..|+.+++++|++. ...|+++|.
T Consensus       102 ~tpL~~A~~~g~~~~v~~Ll~~ga~~~~-~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~-~~~gad~~~  179 (273)
T 2pnn_A          102 QTALHIAIERRNMTLVTLLVENGADVQA-AANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQN-SWQPADISA  179 (273)
T ss_dssp             CCHHHHHHHTTCHHHHHHHHHTTCCTTC-CBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHC-SSCCCCTTC
T ss_pred             CCHHHHHHHcCCHHHHHHHHHCCCCcCc-cccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhc-ccCCCCcee
Confidence            5999999999999999999999999866 565              799999999999999999999921 016899999


Q ss_pred             cCCCCCchhHHHHhcCC---------CCc-ccccccCcccccccccccc-------cccCCCCCHHHHHHhcCCchHHHH
Q 019816           67 KDVKGNTPFHVLAAVCP---------DPR-PYNAGYGIIPYKIAKGYYQ-------AVNKQNISVEHINRYGFPELEKEI  129 (335)
Q Consensus        67 ~d~~G~TpLH~Aa~~g~---------~~~-~lL~~~~~~~~~~~~~~~~-------~~n~~G~Tpl~~a~~~~~~~~~~i  129 (335)
                      +|.+|+||||+|+..|+         .++ ++|        +..|++++       .+|.+|+||||+|+..+..   ++
T Consensus       180 ~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~L--------l~~ga~~n~~~~~~~~~d~~g~TpL~~A~~~g~~---~i  248 (273)
T 2pnn_A          180 RDSVGNTVLHALVEVADNTVDNTKFVTSMYNEI--------LILGAKLHPTLKLEEITNRKGLTPLALAASSGKI---GV  248 (273)
T ss_dssp             CCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHH--------HHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCH---HH
T ss_pred             eCCCCCcHHHHHHHccCcchhHHHHHHHHHHHH--------HHhhhhcccccccccccCCCCCCHHHHHHHhChH---HH
Confidence            99999999999999988         345 667        78888886       5999999999999988854   88


Q ss_pred             HHHHHHcCCC
Q 019816          130 KELAKADGNG  139 (335)
Q Consensus       130 ~~~l~~~~~~  139 (335)
                      +++|.+.|+.
T Consensus       249 v~~Ll~~ga~  258 (273)
T 2pnn_A          249 LAYILQREIH  258 (273)
T ss_dssp             HHHHHHHHTC
T ss_pred             HHHHHHCCCC
Confidence            8888887764

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B

Probab=99.82  E-value=1.1e-20  Score=153.90  Aligned_cols=117  Identities=15%  Similarity=0.094  Sum_probs=105.7

Q ss_pred             CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHh
Q 019816            1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAA   80 (335)
Q Consensus         1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~   80 (335)
                      +||||+ |..|+.++++.|++.+++++. +|..|+||||+|+..|+.+++++|+    ..|.+++.+|.+|+||||+|+.
T Consensus        37 ~t~L~~-~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll----~~g~~~~~~~~~g~t~L~~A~~  110 (156)
T 1bd8_A           37 KTALQV-MMFGSTAIALELLKQGASPNV-QDTSGTSPVHDAARTGFLDTLKVLV----EHGADVNVPDGTGALPIHLAVQ  110 (156)
T ss_dssp             CCHHHH-SCTTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHH----HTTCCSCCCCTTSCCHHHHHHH
T ss_pred             CcHHHH-HHcCCHHHHHHHHHCCCCCCC-cCCCCCCHHHHHHHcCcHHHHHHHH----HcCCCCCCcCCCCCcHHHHHHH
Confidence            599999 999999999999999999865 7999999999999999999999999    5789999999999999999999


Q ss_pred             cCCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhcCCchHHHHHHHHHH
Q 019816           81 VCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPELEKEIKELAKA  135 (335)
Q Consensus        81 ~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~  135 (335)
                      .|+.++ ++|        +.. ++++.+|.+|.||+|+|+..+..   ++++.|.+
T Consensus       111 ~~~~~~v~~L--------l~~-~~~~~~~~~g~t~l~~A~~~~~~---~~v~~Ll~  154 (156)
T 1bd8_A          111 EGHTAVVSFL--------AAE-SDLHRRDARGLTPLELALQRGAQ---DLVDILQG  154 (156)
T ss_dssp             HTCHHHHHHH--------HTT-SCTTCCCTTSCCHHHHHHHSCCH---HHHHHHHT
T ss_pred             hChHHHHHHH--------Hhc-cCCCCcCCCCCCHHHHHHHcCcH---HHHHHHHh
Confidence            999998 777        666 89999999999999999988754   66666543

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A

Probab=99.82  E-value=1.3e-20  Score=166.30  Aligned_cols=132  Identities=17%  Similarity=0.112  Sum_probs=105.4

Q ss_pred             CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccc-cccccCCCCCchhHHHH
Q 019816            1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKN-LIFEKDVKGNTPFHVLA   79 (335)
Q Consensus         1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~-~~n~~d~~G~TpLH~Aa   79 (335)
                      +||||+|+..|+.++++.|++++++++. +|..|+||||+|+..|+.+++++|++    .+. +++.+|.+|+||||+|+
T Consensus        58 ~t~L~~A~~~g~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~----~~~~~~~~~~~~g~t~L~~A~  132 (253)
T 1yyh_A           58 ETALHLAARYSRSDAAKRLLEASADANI-QDNMGRTPLHAAVSADAQGVFQILIR----NRATDLDARMHDGTTPLILAA  132 (253)
T ss_dssp             CCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHHTCHHHHHHHHH----STTSCTTCCCTTCCCHHHHHH
T ss_pred             CcHHHHHHHcCCHHHHHHHHHcCCCCCC-CCCCCCCHHHHHHHcCCHHHHHHHHH----cCCCCccccCCCCCcHHHHHH
Confidence            5899999999999999999999988855 78899999999999999999999983    333 78888888888888888


Q ss_pred             hcCCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhcCCchHHHHHHHHHHcC--------CCCCCcchhhh
Q 019816           80 AVCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPELEKEIKELAKADG--------NGQYPDGVIKM  148 (335)
Q Consensus        80 ~~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~~~--------~~~~p~~~~~~  148 (335)
                      ..|+.++ ++|        +..+++++.+|.+|+||||+|+..+..   ++++.|.+.|        .|.+|++....
T Consensus       133 ~~~~~~~v~~L--------l~~g~~~~~~d~~g~t~L~~A~~~~~~---~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~  199 (253)
T 1yyh_A          133 RLAVEGMLEDL--------INSHADVNAVDDLGKSALHWAAAVNNV---DAAVVLLKNGANKDMQNNREETPLFLAAR  199 (253)
T ss_dssp             HHTCSSHHHHH--------HHTTCCTTCBCTTSCBHHHHHHHHTCH---HHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred             HcChHHHHHHH--------HHcCCCCCCcCCCCCCHHHHHHHcCCH---HHHHHHHHcCCCCCCcCCCCCCHHHHHHH
Confidence            8888888 777        677888888888888888888876643   6666666633        34566665543

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A

Probab=99.82  E-value=2.9e-20  Score=160.66  Aligned_cols=120  Identities=16%  Similarity=0.039  Sum_probs=81.6

Q ss_pred             CchHhHHHhcCCHHHHHHHhhhC--CCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCccc--ccccccCCCCCchhH
Q 019816            1 MTALHLAAGQGNDWIVQEIIQRC--PECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVK--NLIFEKDVKGNTPFH   76 (335)
Q Consensus         1 ~TpLH~Aa~~G~~e~v~~Ll~~~--~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~--~~~n~~d~~G~TpLH   76 (335)
                      +||||+|+..|+.++++.|++.+  ++.....|..|+||||+|+..|+.++++.|+    ..+  .+++.+|.+|+||||
T Consensus        37 ~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll----~~g~~~~~~~~~~~g~t~L~  112 (228)
T 2dzn_A           37 RIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACSVGNLEVVKSLY----DRPLKPDLNKITNQGVTCLH  112 (228)
T ss_dssp             CCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHHHHHCCHHHHHHHH----SSSSCCCTTCCCTTCCCHHH
T ss_pred             CCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCCHHHHHHHcCCHHHHHHHH----hCCCCcccccCCcCCCCHHH
Confidence            47777777777777777777777  4444435667777777777777777777777    333  566677777777777


Q ss_pred             HHHhcCCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhcCCchHHHHHHHHHH
Q 019816           77 VLAAVCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPELEKEIKELAKA  135 (335)
Q Consensus        77 ~Aa~~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~  135 (335)
                      +|+..|+.++ ++|        +..|++++.+|..|+||||+|+..+..   ++++.|.+
T Consensus       113 ~A~~~~~~~~~~~L--------l~~g~~~~~~~~~g~t~L~~A~~~~~~---~~v~~Ll~  161 (228)
T 2dzn_A          113 LAVGKKWFEVSQFL--------IENGASVRIKDKFNQIPLHRAASVGSL---KLIELLCG  161 (228)
T ss_dssp             HHHHTTCHHHHHHH--------HHTTCCSCCCCTTSCCHHHHHHHTTCH---HHHHHHHT
T ss_pred             HHHHcCCHhHHHHH--------HHcCCCccccCCCCCCHHHHHHHcCCH---HHHHHHHh
Confidence            7777777666 666        566677777777777777777765533   55555554

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}

Probab=99.82  E-value=2.8e-20  Score=157.73  Aligned_cols=108  Identities=11%  Similarity=-0.069  Sum_probs=50.2

Q ss_pred             chHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHhc
Q 019816            2 TALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAAV   81 (335)
Q Consensus         2 TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~~   81 (335)
                      ||||+|++.|+.+++++|+++++++.. +|..|+||||+|+..|+.++++.|++.   .+.+++.+|..|+||||+|+..
T Consensus        41 t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~l~~A~~~~~~~~~~~Ll~~---~~~~~~~~~~~g~t~L~~A~~~  116 (201)
T 3hra_A           41 TPLNIAVHNNDIEIAKALIDRGADINL-QNSISDSPYLYAGAQGRTEILAYMLKH---ATPDLNKHNRYGGNALIPAAEK  116 (201)
T ss_dssp             CHHHHHHHHTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHH---SCCCTTCCCTTSCCSHHHHHHT
T ss_pred             CHHHHHHHcCCHHHHHHHHHcCCCCCC-CCCCCCCHHHHHHHcCCHHHHHHHHhc---cCcccccccCCCCcHHHHHHHc
Confidence            444444444444444444444444432 344444444444444444444444421   2334444444444555555444


Q ss_pred             CCCCc-ccccccCcccccccc-cccccccCCCCCHHHHHHhc
Q 019816           82 CPDPR-PYNAGYGIIPYKIAK-GYYQAVNKQNISVEHINRYG  121 (335)
Q Consensus        82 g~~~~-~lL~~~~~~~~~~~~-~~~~~~n~~G~Tpl~~a~~~  121 (335)
                      |+.++ ++|        +..+ .+++.+|..|+||||+|+..
T Consensus       117 ~~~~~v~~L--------l~~g~~~~~~~~~~g~t~L~~A~~~  150 (201)
T 3hra_A          117 GHIDNVKLL--------LEDGREDIDFQNDFGYTALIEAVGL  150 (201)
T ss_dssp             TCHHHHHHH--------HHHCCCCTTCCCTTSCCHHHHHHHS
T ss_pred             CCHHHHHHH--------HHcCCCCcCCCCCCCCCHHHHHHHh
Confidence            44444 333        3333 44455555555555555533

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A

Probab=99.82  E-value=3.4e-20  Score=163.49  Aligned_cols=124  Identities=15%  Similarity=0.003  Sum_probs=110.8

Q ss_pred             CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHh
Q 019816            1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAA   80 (335)
Q Consensus         1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~   80 (335)
                      +||||+|+..|+.+++++|++.++.....+|..|+||||+|+..|+.++++.|+    ..+.++|.+|.+|+||||+|+.
T Consensus        91 ~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll----~~g~~~~~~d~~g~t~L~~A~~  166 (253)
T 1yyh_A           91 RTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLI----NSHADVNAVDDLGKSALHWAAA  166 (253)
T ss_dssp             CCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHHHHTCSSHHHHHH----HTTCCTTCBCTTSCBHHHHHHH
T ss_pred             CCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcChHHHHHHHH----HcCCCCCCcCCCCCCHHHHHHH
Confidence            589999999999999999999988444558999999999999999999999999    5788999999999999999999


Q ss_pred             cCCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhcCCchHHHHHHHHHHcCCC
Q 019816           81 VCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPELEKEIKELAKADGNG  139 (335)
Q Consensus        81 ~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~~~~~  139 (335)
                      .|+.++ ++|        +..|++++.+|..|+||||+|+..+..   +++++|.+.|+.
T Consensus       167 ~~~~~~v~~L--------l~~ga~~~~~~~~g~tpL~~A~~~~~~---~~v~~Ll~~ga~  215 (253)
T 1yyh_A          167 VNNVDAAVVL--------LKNGANKDMQNNREETPLFLAAREGSY---ETAKVLLDHFAN  215 (253)
T ss_dssp             HTCHHHHHHH--------HHTTCCTTCCCTTSCCHHHHHHHHTCH---HHHHHHHHTTCC
T ss_pred             cCCHHHHHHH--------HHcCCCCCCcCCCCCCHHHHHHHCCCH---HHHHHHHHcCCC
Confidence            999998 888        888999999999999999999987754   788888886544

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A

Probab=99.82  E-value=9.3e-21  Score=159.08  Aligned_cols=107  Identities=14%  Similarity=0.094  Sum_probs=99.4

Q ss_pred             CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccC-CCCCchhHHHH
Q 019816            1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKD-VKGNTPFHVLA   79 (335)
Q Consensus         1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d-~~G~TpLH~Aa   79 (335)
                      +||||+|++.|+.++++.|++ +.+++. +|..|+||||+|+..|+.+++++|+    ..++++|.+| .+|+||||+|+
T Consensus        45 ~t~L~~A~~~g~~~~v~~Ll~-~~~~~~-~d~~g~t~L~~A~~~~~~~~v~~Ll----~~ga~~~~~~~~~g~tpL~~A~  118 (183)
T 3deo_A           45 ETPWWTAARKADEQALSQLLE-DRDVDA-VDENGRTALLFVAGLGSDKCVRLLA----EAGADLDHRDMRGGLTALHMAA  118 (183)
T ss_dssp             HHHHHHHHHTTCHHHHHHHTT-TSCTTC-CCTTSCCHHHHHHHHTCHHHHHHHH----HTTCCTTCCCSSSSCCHHHHHH
T ss_pred             CCHHHHHHHcCCHHHHHHHHh-cCCCCC-cCCCCCCHHHHHHHcCCHHHHHHHH----HcCCCCCcCCCCCCCCHHHHHH
Confidence            389999999999999999999 777755 7999999999999999999999999    5789999998 88999999999


Q ss_pred             hcCCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhc
Q 019816           80 AVCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYG  121 (335)
Q Consensus        80 ~~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~  121 (335)
                      ..|+.++ ++|        +..|++++.+|.+|+||+|+|++.
T Consensus       119 ~~~~~~~v~~L--------l~~ga~~~~~d~~g~tpl~~A~~~  153 (183)
T 3deo_A          119 GYVRPEVVEAL--------VELGADIEVEDERGLTALELAREI  153 (183)
T ss_dssp             HTTCHHHHHHH--------HHHTCCTTCCCTTSCCHHHHHHHH
T ss_pred             hcCcHHHHHHH--------HHcCCCCcCCCCCCCCHHHHHHHh
Confidence            9999999 888        888999999999999999999854

>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}

Probab=99.82  E-value=3.1e-20  Score=166.25  Aligned_cols=120  Identities=14%  Similarity=0.069  Sum_probs=90.0

Q ss_pred             CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHH-----hcCCHhHHHHHHhcCCcccccccccCCCCCchh
Q 019816            1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAM-----VSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPF   75 (335)
Q Consensus         1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~-----~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpL   75 (335)
                      +||||+|+..|+.++++.|++.++......|..|+||||+|+     ..++.++++.|+    ..+...+..|..|+|||
T Consensus       112 ~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll----~~g~~~~~~~~~g~tpL  187 (276)
T 4hbd_A          112 NTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALATLKTQDDIETVLQLF----RLGNINAKASQAGQTAL  187 (276)
T ss_dssp             CCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGGCCCCSHHHHHHHHHHH----HHSCTTCCCTTTCCCHH
T ss_pred             CCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHHHHhhhhhhHHHHHHHH----HcCCCccccCCCCCCHH
Confidence            599999999999999999999998333447777888888777     456667777777    45666677777777777


Q ss_pred             HHHHhcCCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhcCCchHHHHHHHHHH
Q 019816           76 HVLAAVCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPELEKEIKELAKA  135 (335)
Q Consensus        76 H~Aa~~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~  135 (335)
                      |+|+..|+.++ ++|        +..|++++.+|.+|+||||+|+..+..   ++++.|.+
T Consensus       188 h~A~~~g~~~~v~~L--------l~~gad~n~~d~~G~TpLh~A~~~g~~---~iv~~Ll~  237 (276)
T 4hbd_A          188 MLAVSHGRVDVVKAL--------LACEADVNVQDDDGSTALMCACEHGHK---EIAGLLLA  237 (276)
T ss_dssp             HHHHHTTCHHHHHHH--------HHTTCCTTCCCTTSCCHHHHHHHHTCH---HHHHHHHT
T ss_pred             HHHHHcCCHHHHHHH--------HhCCCCCCCCCCCCCCHHHHHHHCCCH---HHHHHHHh
Confidence            77777777777 666        667777777777777777777766643   55665554

>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}

Probab=99.82  E-value=2.8e-20  Score=161.38  Aligned_cols=122  Identities=16%  Similarity=0.037  Sum_probs=105.7

Q ss_pred             CchHhHHHhcCCHHHHHHHhhh-CCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccc-----cccCCCCCch
Q 019816            1 MTALHLAAGQGNDWIVQEIIQR-CPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLI-----FEKDVKGNTP   74 (335)
Q Consensus         1 ~TpLH~Aa~~G~~e~v~~Ll~~-~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~-----n~~d~~G~Tp   74 (335)
                      +||||+|++.|+.++++.|++. +.+++. +|.+|+||||+|+..|+.++++.|++    .+.++     +.+|.+|+||
T Consensus         4 ~t~L~~A~~~g~~~~v~~Ll~~~g~~~~~-~~~~g~t~L~~A~~~g~~~~v~~Ll~----~~~~~~~~~~~~~~~~g~t~   78 (232)
T 2rfa_A            4 ESPLLLAAKENDVQALSKLLKFEGCEVHQ-RGAMGETALHIAALYDNLEAAMVLME----AAPELVFEPMTSELYEGQTA   78 (232)
T ss_dssp             TCHHHHHHHTTCHHHHHHHHTTTCSCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHH----HCGGGGGCCCCSTTTTTCCH
T ss_pred             CCHHHHHHHcCCHHHHHHHHHhcCCCccc-CCCCCCCHHHHHHHcCCHHHHHHHHH----cCchhccccccccCCCCcCH
Confidence            5999999999999999999998 767654 79999999999999999999999993    45544     7788899999


Q ss_pred             hHHHHhcCCCCc-ccccccCcccccccccccccccC-------------CCCCHHHHHHhcCCchHHHHHHHHHHcCC
Q 019816           75 FHVLAAVCPDPR-PYNAGYGIIPYKIAKGYYQAVNK-------------QNISVEHINRYGFPELEKEIKELAKADGN  138 (335)
Q Consensus        75 LH~Aa~~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~-------------~G~Tpl~~a~~~~~~~~~~i~~~l~~~~~  138 (335)
                      ||+|+..|+.++ ++|        +..+++++.++.             +|.||||+|+..+..   +++++|.+.|+
T Consensus        79 L~~A~~~~~~~~v~~L--------l~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~---~~v~~Ll~~ga  145 (232)
T 2rfa_A           79 LHIAVINQNVNLVRAL--------LARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSE---EIVRLLIEHGA  145 (232)
T ss_dssp             HHHHHHTTCHHHHHHH--------HHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCH---HHHHHHHHTTC
T ss_pred             HHHHHHcCCHHHHHHH--------HhCCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCH---HHHHHHHHCCC
Confidence            999999999999 888        778888888765             799999999988754   78887777554

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E

Probab=99.82  E-value=1.4e-20  Score=163.95  Aligned_cols=135  Identities=16%  Similarity=0.055  Sum_probs=96.1

Q ss_pred             CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCc--ccccccccCCCCCchhHHH
Q 019816            1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPV--VKNLIFEKDVKGNTPFHVL   78 (335)
Q Consensus         1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~--~~~~~n~~d~~G~TpLH~A   78 (335)
                      +||||+|+..|+.+++++|+++++++.. +|..|+||||+|+..|+.++++.|++....  ....++.+|..|+||||+|
T Consensus        46 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A  124 (236)
T 1ikn_D           46 QTPLHLAVITNQPEIAEALLGAGCDPEL-RDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLA  124 (236)
T ss_dssp             CCHHHHHHHTTCHHHHHCCCSCCCCSCC-CCTTCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHH
T ss_pred             CCHHHHHHHcCCHHHHHHHHHcCCCCCC-cCCCCCCHHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHH
Confidence            4788888888888888888888877754 677888888888888888888888732110  1234677777788888888


Q ss_pred             HhcCCCCc-ccccccCcccccccccccccccC-CCCCHHHHHHhcCCchHHHHHHHHHHcC--------CCCCCcchhh
Q 019816           79 AAVCPDPR-PYNAGYGIIPYKIAKGYYQAVNK-QNISVEHINRYGFPELEKEIKELAKADG--------NGQYPDGVIK  147 (335)
Q Consensus        79 a~~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~-~G~Tpl~~a~~~~~~~~~~i~~~l~~~~--------~~~~p~~~~~  147 (335)
                      +..|+.++ ++|        +..|++++.+|. .|.||||+|+..+..   +++++|.+.|        .|.+|++...
T Consensus       125 ~~~~~~~~v~~L--------l~~g~~~~~~~~~~g~tpL~~A~~~~~~---~~v~~Ll~~ga~~~~~~~~g~tpl~~A~  192 (236)
T 1ikn_D          125 SIHGYLGIVELL--------VSLGADVNAQEPCNGRTALHLAVDLQNP---DLVSLLLKCGADVNRVTYQGYSPYQLTW  192 (236)
T ss_dssp             HHTTCHHHHHHH--------HHHTCCTTCCCTTTCCCHHHHHHHTTCH---HHHHHHHTTTCCSCCCCTTCCCGGGGCT
T ss_pred             HHcCCHHHHHHH--------HHcCCCCCCCCCCCCCCHHHHHHHcCCH---HHHHHHHHcCCCCCcccCCCCCHHHHHH
Confidence            88887777 777        677778887776 788888888876643   6666666643        2345665544

>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}

Probab=99.82  E-value=1.5e-20  Score=163.93  Aligned_cols=121  Identities=16%  Similarity=0.049  Sum_probs=109.2

Q ss_pred             chHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHhc
Q 019816            2 TALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAAV   81 (335)
Q Consensus         2 TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~~   81 (335)
                      ||||+|+..|+.++++.|++.+++++. +|..|+||||+|+..|+.+++++|+    ..|+++|.+|.+|+||||+|+..
T Consensus        23 t~L~~A~~~g~~~~v~~Ll~~g~~~~~-~d~~g~tpLh~A~~~g~~~~v~~Ll----~~ga~~n~~d~~g~tpLh~A~~~   97 (229)
T 2vge_A           23 VLLLDAALTGELEVVQQAVKEMNDPSQ-PNEEGITALHNAICGANYSIVDFLI----TAGANVNSPDSHGWTPLHCAASC   97 (229)
T ss_dssp             HHHHHHHHHTCHHHHHHHHHHSSCTTC-CCTTSCCHHHHHHHTTCHHHHHHHH----HTTCCTTCCCTTCCCHHHHHHHT
T ss_pred             HHHHHHHHcCCHHHHHHHHhcCCCCCC-CCCCCCCHHHHHHHcCCHHHHHHHH----HCCCCCCCCCCCCCCHHHHHHHc
Confidence            789999999999999999999998865 7999999999999999999999999    56899999999999999999999


Q ss_pred             CCCCc-ccccccCccccccccccccccc-CCCCCHHHHH--HhcCCchHHHHHHHHHHcCC
Q 019816           82 CPDPR-PYNAGYGIIPYKIAKGYYQAVN-KQNISVEHIN--RYGFPELEKEIKELAKADGN  138 (335)
Q Consensus        82 g~~~~-~lL~~~~~~~~~~~~~~~~~~n-~~G~Tpl~~a--~~~~~~~~~~i~~~l~~~~~  138 (335)
                      |+.++ ++|        +..|++++.++ .+|+||||+|  +..+   ..+++++|.+.|+
T Consensus        98 g~~~~v~~L--------l~~ga~~~~~~~~~g~tpL~~A~a~~~~---~~~~v~~Ll~~ga  147 (229)
T 2vge_A           98 NDTVICMAL--------VQHGAAIFATTLSDGATAFEKCDPYREG---YADCATYLADVEQ  147 (229)
T ss_dssp             TCHHHHHHH--------HTTTCCTTCCCSSTTCCTGGGCCTTSTT---HHHHHHHHHHHHH
T ss_pred             CCHHHHHHH--------HHcCCCcccccCCCCCCHHHHHHHHhcC---hHHHHHHHHHcCC
Confidence            99999 888        88999999986 6999999999  6555   4578887777543

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1

Probab=99.82  E-value=5.9e-20  Score=165.39  Aligned_cols=130  Identities=21%  Similarity=0.080  Sum_probs=99.5

Q ss_pred             CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCccccccccc-------------
Q 019816            1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEK-------------   67 (335)
Q Consensus         1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~-------------   67 (335)
                      +||||+||..|+.+++++|++++++++. +|..|+||||+|+..|+.+++++|++    .+++++.+             
T Consensus        74 ~t~L~~A~~~g~~~~v~~Ll~~ga~~~~-~~~~g~tpL~~A~~~g~~~~v~~Ll~----~g~~~~~~~~~g~t~l~~A~~  148 (299)
T 1s70_B           74 LTALHQACIDDNVDMVKFLVENGANINQ-PDNEGWIPLHAAASCGYLDIAEYLIS----QGAHVGAVNSEGDTPLDIAEE  148 (299)
T ss_dssp             CBHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHHTCHHHHHHHHH----TTCCTTCCCTTSCCHHHHCCS
T ss_pred             CCHHHHHHHcCCHHHHHHHHHCCCCCCC-CCCCCCcHHHHHHHcCCHHHHHHHHh----CCCCCCCcCCCCCCHHHHHHh
Confidence            4788888888888888888888887755 68888888888888888888888883    33444333             


Q ss_pred             -----------------------------------------------CCCCCchhHHHHhcCCCCc-ccccccCcccccc
Q 019816           68 -----------------------------------------------DVKGNTPFHVLAAVCPDPR-PYNAGYGIIPYKI   99 (335)
Q Consensus        68 -----------------------------------------------d~~G~TpLH~Aa~~g~~~~-~lL~~~~~~~~~~   99 (335)
                                                                     |..|.||||+|+..|+.++ ++|        +.
T Consensus       149 ~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~L--------l~  220 (299)
T 1s70_B          149 EAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLL--------IQ  220 (299)
T ss_dssp             HHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHH--------HT
T ss_pred             cchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhhhcCCCCCHHHHHHHCCcHHHHHHH--------HH
Confidence                                                           3456777788888888777 777        77


Q ss_pred             cccccccccCCCCCHHHHHHhcCCchHHHHHHHHHHcCC--------CCCCcchh
Q 019816          100 AKGYYQAVNKQNISVEHINRYGFPELEKEIKELAKADGN--------GQYPDGVI  146 (335)
Q Consensus       100 ~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~~~~--------~~~p~~~~  146 (335)
                      .|++++.+|.+|.||||+|+..+..   +++++|.+.|+        |.+|++..
T Consensus       221 ~g~d~~~~d~~g~tpL~~A~~~~~~---~~v~~Ll~~gad~~~~d~~g~t~l~~A  272 (299)
T 1s70_B          221 ARYDVNIKDYDGWTPLHAAAHWGKE---EACRILVENLCDMEAVNKVGQTAFDVA  272 (299)
T ss_dssp             TTCCTTCCCTTCCCHHHHHHHTTCH---HHHHHHHHTTCCTTCCCTTSCCTTTSC
T ss_pred             cCCCCCCcCCCCCcHHHHHHhcCCH---HHHHHHHHcCCCCCCcCCCCCCHHHHH
Confidence            8899999999999999999988754   77777777543        45566544

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D

Probab=99.82  E-value=2.3e-20  Score=166.23  Aligned_cols=124  Identities=19%  Similarity=0.100  Sum_probs=108.4

Q ss_pred             CchHhHHHhcCCHHHHHHHhhhCCCc----------------------------------------------cccccCCC
Q 019816            1 MTALHLAAGQGNDWIVQEIIQRCPEC----------------------------------------------CELVDDRG   34 (335)
Q Consensus         1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~----------------------------------------------~~~~d~~G   34 (335)
                      +||||+|+..|+.+++++|++++++.                                              ...+|..|
T Consensus        79 ~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  158 (282)
T 1oy3_D           79 HTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDG  158 (282)
T ss_dssp             CCHHHHHTTTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGTTCCCTTS
T ss_pred             CCHHHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCC
Confidence            58899999999999999998877551                                              23468899


Q ss_pred             CchHHHHHhcCCHhHHHHHHhcCCcccccccccCCC-CCchhHHHHhcCCCCc-ccccccCcccccccccccccccCCCC
Q 019816           35 WNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVK-GNTPFHVLAAVCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNI  112 (335)
Q Consensus        35 ~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~-G~TpLH~Aa~~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~  112 (335)
                      +||||+|+..|+.+++++|+    ..|++++.+|.. |+||||+|+..|+.++ ++|        +..|++++.+|..|+
T Consensus       159 ~t~L~~A~~~g~~~~v~~Ll----~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~L--------l~~gad~~~~d~~g~  226 (282)
T 1oy3_D          159 HTPLHVAVIHKDAEMVRLLR----DAGADLNKPEPTCGRTPLHLAVEAQAASVLELL--------LKAGADPTARMYGGR  226 (282)
T ss_dssp             CCHHHHHHHTTCHHHHHHHH----HHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHH--------HHTTCCTTCCCTTSC
T ss_pred             cCHHHHHHHcCCHHHHHHHH----HcCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHH--------HHcCCCCcccccCCC
Confidence            99999999999999999999    578999999865 9999999999999999 888        888999999999999


Q ss_pred             CHHHHHHhcCCchHHHHHHHHHHcCCC
Q 019816          113 SVEHINRYGFPELEKEIKELAKADGNG  139 (335)
Q Consensus       113 Tpl~~a~~~~~~~~~~i~~~l~~~~~~  139 (335)
                      ||||+|+..+..   +++++|.+.|+.
T Consensus       227 tpL~~A~~~~~~---~~v~~Ll~~ga~  250 (282)
T 1oy3_D          227 TPLGSALLRPNP---ILARLLRAHGAP  250 (282)
T ss_dssp             CHHHHHHTSSCH---HHHHHHHHTTCC
T ss_pred             CHHHHHHHcCCc---HHHHHHHHcCCC
Confidence            999999988754   888888886654

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}

Probab=99.82  E-value=3.5e-20  Score=157.14  Aligned_cols=121  Identities=13%  Similarity=-0.034  Sum_probs=106.2

Q ss_pred             CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCccc-ccccccCCCCCchhHHHH
Q 019816            1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVK-NLIFEKDVKGNTPFHVLA   79 (335)
Q Consensus         1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~-~~~n~~d~~G~TpLH~Aa   79 (335)
                      +||||+|+..|+.++++.|++.++......|..|+||||+|+..|+.+++++|+    ..+ .+++.+|.+|+||||+|+
T Consensus        73 ~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll----~~g~~~~~~~~~~g~t~L~~A~  148 (201)
T 3hra_A           73 DSPYLYAGAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLL----EDGREDIDFQNDFGYTALIEAV  148 (201)
T ss_dssp             CCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHH----HHCCCCTTCCCTTSCCHHHHHH
T ss_pred             CCHHHHHHHcCCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHH----HcCCCCcCCCCCCCCCHHHHHH
Confidence            589999999999999999996665444558999999999999999999999999    455 889999999999999999


Q ss_pred             hcCC-----CCc-ccccccCcccccccccccccccCCCCCHHHHHHhcCCchHHHHHHHHHHc
Q 019816           80 AVCP-----DPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPELEKEIKELAKAD  136 (335)
Q Consensus        80 ~~g~-----~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~~  136 (335)
                      ..++     .++ ++|        +..|++++.+|.+|+||+|+|+..+..   +++++|.+.
T Consensus       149 ~~~~~~~~~~~~v~~L--------l~~ga~~~~~~~~g~t~l~~A~~~~~~---~~~~~Ll~~  200 (201)
T 3hra_A          149 GLREGNQLYQDIVKLL--------MENGADQSIKDNSGRTAMDYANQKGYT---EISKILAQY  200 (201)
T ss_dssp             HSSCCSHHHHHHHHHH--------HHTTCCTTCCCTTSCCHHHHHHHHTCH---HHHHHHHTC
T ss_pred             HhccchhhHHHHHHHH--------HHCCCCCCccCCCCCCHHHHHHHcCCH---hHHHHHHhc
Confidence            9988     556 788        888999999999999999999988754   777777654

>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1

Probab=99.82  E-value=2.8e-20  Score=166.90  Aligned_cols=129  Identities=16%  Similarity=0.060  Sum_probs=115.8

Q ss_pred             chHhHHHhcCCHHHHHHHhhhCCCccc-----cccCCCCchHHHHHhc---CCHhHHHHHHhcCCcccccccccCCCCCc
Q 019816            2 TALHLAAGQGNDWIVQEIIQRCPECCE-----LVDDRGWNVLHFAMVS---FDKSDLKHLLNEYPVVKNLIFEKDVKGNT   73 (335)
Q Consensus         2 TpLH~Aa~~G~~e~v~~Ll~~~~~~~~-----~~d~~G~t~Lh~A~~~---g~~~~v~~Ll~~~~~~~~~~n~~d~~G~T   73 (335)
                      ++||.|+..|+.+.++.+++.+++.+.     ..|..|+||||+|+..   |+.+++++|+    ..|+++|.+|.+|+|
T Consensus       132 ~~l~~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll----~~ga~in~~d~~g~T  207 (278)
T 1dcq_A          132 HSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLV----QNSGNLDKQTGKGST  207 (278)
T ss_dssp             HHHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHH----HHCSCTTCCCTTCCC
T ss_pred             hhhhhHhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHH----HCCCCccccCCCCCC
Confidence            479999999999999999999998643     2488999999999999   8999999999    578999999999999


Q ss_pred             hhHHHHhcCCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhcCCchHHHHHHHHHHcCCCCCCcch
Q 019816           74 PFHVLAAVCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPELEKEIKELAKADGNGQYPDGV  145 (335)
Q Consensus        74 pLH~Aa~~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~~~~~~~p~~~  145 (335)
                      |||+|+..|+.++ ++|        +..|++++.+|.+|+||||+|+..+..   ++++.|.+.+++.++.+.
T Consensus       208 pLh~A~~~g~~~~v~~L--------l~~gad~~~~d~~g~tpL~~A~~~~~~---~~v~~Ll~~ga~~~~~~~  269 (278)
T 1dcq_A          208 ALHYCCLTDNAECLKLL--------LRGKASIEIANESGETPLDIAKRLKHE---HCEELLTQALSGRFNSHV  269 (278)
T ss_dssp             HHHHHHHTTCHHHHHHH--------HHTTCCTTCCCTTSCCHHHHHHHTTCH---HHHHHHHHHHTTCCCSSC
T ss_pred             HHHHHHHcCCHHHHHHH--------HHcCCCCCCccCCCCCHHHHHHHcCCH---HHHHHHHHcCCCCCCcce
Confidence            9999999999999 888        889999999999999999999988754   888888888887666653

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A

Probab=99.82  E-value=4.6e-20  Score=159.37  Aligned_cols=135  Identities=19%  Similarity=0.114  Sum_probs=115.0

Q ss_pred             CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCccc--ccccc-cCCCCCchhHH
Q 019816            1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVK--NLIFE-KDVKGNTPFHV   77 (335)
Q Consensus         1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~--~~~n~-~d~~G~TpLH~   77 (335)
                      +||||+|++.|+.++++.|++.+++.....|.+|+||||+|+..|+.++++.|++    .+  .+++. +|..|+||||+
T Consensus         3 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~----~~~~~~~~~~~~~~g~t~L~~   78 (228)
T 2dzn_A            3 NYPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLS----KMENVNLDDYPDDSGWTPFHI   78 (228)
T ss_dssp             CCHHHHHHHTTCHHHHHHHHHHCGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHH----TCTTCCGGGCCCTTSCCHHHH
T ss_pred             ccHHHHHHHhCCHHHHHHHHhcCccccccCCCCCCCHHHHHHHcCCHHHHHHHHh----ccccccccccCCCCCCCHHHH
Confidence            5999999999999999999999999877789999999999999999999999993    44  56666 88999999999


Q ss_pred             HHhcCCCCc-ccccccCcccccccc--cccccccCCCCCHHHHHHhcCCchHHHHHHHHHHcC--------CCCCCcchh
Q 019816           78 LAAVCPDPR-PYNAGYGIIPYKIAK--GYYQAVNKQNISVEHINRYGFPELEKEIKELAKADG--------NGQYPDGVI  146 (335)
Q Consensus        78 Aa~~g~~~~-~lL~~~~~~~~~~~~--~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~~~--------~~~~p~~~~  146 (335)
                      |+..|+.++ ++|        +..+  .+++.+|.+|.||||+|+..+..   +++++|.+.+        .|.+|++..
T Consensus        79 A~~~~~~~~~~~L--------l~~g~~~~~~~~~~~g~t~L~~A~~~~~~---~~~~~Ll~~g~~~~~~~~~g~t~L~~A  147 (228)
T 2dzn_A           79 ACSVGNLEVVKSL--------YDRPLKPDLNKITNQGVTCLHLAVGKKWF---EVSQFLIENGASVRIKDKFNQIPLHRA  147 (228)
T ss_dssp             HHHHCCHHHHHHH--------HSSSSCCCTTCCCTTCCCHHHHHHHTTCH---HHHHHHHHTTCCSCCCCTTSCCHHHHH
T ss_pred             HHHcCCHHHHHHH--------HhCCCCcccccCCcCCCCHHHHHHHcCCH---hHHHHHHHcCCCccccCCCCCCHHHHH
Confidence            999999998 777        6766  89999999999999999987754   6777777643        345677765


Q ss_pred             hhhh
Q 019816          147 KMNK  150 (335)
Q Consensus       147 ~~~~  150 (335)
                      ....
T Consensus       148 ~~~~  151 (228)
T 2dzn_A          148 ASVG  151 (228)
T ss_dssp             HHTT
T ss_pred             HHcC
Confidence            5433

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D

Probab=99.81  E-value=3.8e-20  Score=164.79  Aligned_cols=142  Identities=18%  Similarity=0.124  Sum_probs=104.1

Q ss_pred             CchHhHHHhcCCHHHHHHHhhhCCCc--cccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHH
Q 019816            1 MTALHLAAGQGNDWIVQEIIQRCPEC--CELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVL   78 (335)
Q Consensus         1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~--~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~A   78 (335)
                      +||||+||+.|+.+++++|++.+++.  ...+|..|+||||+|+..|+.++++.|+    ..|++++.+|.+|+||||+|
T Consensus        10 ~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll----~~ga~~~~~~~~g~tpL~~A   85 (282)
T 1oy3_D           10 DTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLY----AAGAGVLVAERGGHTALHLA   85 (282)
T ss_dssp             CCHHHHHHHTTCHHHHHHHHHHHTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHH----HTTCCSSCCCTTSCCHHHHH
T ss_pred             CcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCCCCHHHHHHHcCCHHHHHHHH----HcCCCCCCCCCCCCCHHHHH
Confidence            58999999999999999999887762  3447888999999999999999999988    46888888899999999999


Q ss_pred             HhcCCCCc-ccccccCcc---------------------------------------cccccccccccccCCCCCHHHHH
Q 019816           79 AAVCPDPR-PYNAGYGII---------------------------------------PYKIAKGYYQAVNKQNISVEHIN  118 (335)
Q Consensus        79 a~~g~~~~-~lL~~~~~~---------------------------------------~~~~~~~~~~~~n~~G~Tpl~~a  118 (335)
                      +..|+.++ ++|...+..                                       .....+.+++.+|..|.||||+|
T Consensus        86 ~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A  165 (282)
T 1oy3_D           86 CRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVA  165 (282)
T ss_dssp             TTTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGTTCCCTTSCCHHHHH
T ss_pred             HHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcCHHHHH
Confidence            98888777 444211100                                       01223566888888888888888


Q ss_pred             HhcCCchHHHHHHHHHHcC---------CCCCCcchhhhh
Q 019816          119 RYGFPELEKEIKELAKADG---------NGQYPDGVIKMN  149 (335)
Q Consensus       119 ~~~~~~~~~~i~~~l~~~~---------~~~~p~~~~~~~  149 (335)
                      +..+..   ++++.|.+.+         .|.+|++.....
T Consensus       166 ~~~g~~---~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~  202 (282)
T 1oy3_D          166 VIHKDA---EMVRLLRDAGADLNKPEPTCGRTPLHLAVEA  202 (282)
T ss_dssp             HHTTCH---HHHHHHHHHTCCTTCCCTTTCCCHHHHHHHT
T ss_pred             HHcCCH---HHHHHHHHcCCCCCCCCCCCCcCHHHHHHHc
Confidence            877643   6666665532         255677765443

>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A

Probab=99.81  E-value=2.3e-20  Score=164.12  Aligned_cols=106  Identities=14%  Similarity=0.109  Sum_probs=98.9

Q ss_pred             CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccC-CCCCchhHHHH
Q 019816            1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKD-VKGNTPFHVLA   79 (335)
Q Consensus         1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d-~~G~TpLH~Aa   79 (335)
                      +||||+||+.|+.++++.|++ +.+++. +|..|+||||+|+.+|+.+++++|+    ..++++|.+| .+|+||||+|+
T Consensus        46 ~t~L~~A~~~g~~~~v~~Ll~-~~~~~~-~d~~g~t~L~~A~~~g~~~~v~~Ll----~~ga~~~~~~~~~g~t~L~~A~  119 (244)
T 3ui2_A           46 ETPWWTAARKADEQALSQLLE-DRDVDA-VDENGRTALLFVAGLGSDKCVRLLA----EAGADLDHRDMRGGLTALHMAA  119 (244)
T ss_dssp             HHHHHHHHTTTCHHHHHHTTT-TCCTTC-BCTTSCBHHHHHHHHTCHHHHHHHH----HTTCCTTCCCSSSCCCHHHHHH
T ss_pred             CCHHHHHHHcCCHHHHHHHHc-CCCCCC-cCCCCCCHHHHHHHCCCHHHHHHHH----HcCCCCCcCCCCCCCCHHHHHH
Confidence            489999999999999999999 877755 7999999999999999999999999    5789999998 88999999999


Q ss_pred             hcCCCCc-ccccccCcccccccccccccccCCCCCHHHHHHh
Q 019816           80 AVCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRY  120 (335)
Q Consensus        80 ~~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~  120 (335)
                      ..|+.++ ++|        +..|++++.+|.+|+||+|+|+.
T Consensus       120 ~~g~~~~v~~L--------l~~ga~~~~~d~~g~t~l~~A~~  153 (244)
T 3ui2_A          120 GYVRPEVVEAL--------VELGADIEVEDERGLTALELARE  153 (244)
T ss_dssp             HTTCHHHHHHH--------HHTTCCTTCCCTTCCCHHHHHHH
T ss_pred             HcCCHHHHHHH--------HHCCCCCCCCCCCCCcHHHHHHH
Confidence            9999999 888        88899999999999999999984

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A

Probab=99.81  E-value=6.2e-20  Score=158.12  Aligned_cols=134  Identities=17%  Similarity=0.109  Sum_probs=115.1

Q ss_pred             CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHh
Q 019816            1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAA   80 (335)
Q Consensus         1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~   80 (335)
                      +||||+|++.|+.+++++|+++++++.. .|..|+||||+|+..|+.++++.|++.   ...+++.+|.+|.||||+|+.
T Consensus        26 ~t~L~~A~~~g~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~---~~~~~~~~~~~g~t~L~~A~~  101 (223)
T 2f8y_A           26 ETALHLAARYSRSDAAKRLLEASADANI-QDNMGRTPLHAAVSADAQGVFQILIRN---RATDLDARMHDGTTPLILAAR  101 (223)
T ss_dssp             CCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHB---TTSCTTCCCTTCCCHHHHHHH
T ss_pred             CchHHHHHHcCCHHHHHHHHHcCCCCCC-cCCCCCCHHHHHHHcCCHHHHHHHHHc---CCCCcccCCCCCCcHHHHHHH
Confidence            5899999999999999999999998865 799999999999999999999999932   223889999999999999999


Q ss_pred             cCCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhcCCchHHHHHHHHHHcC--------CCCCCcchhhhh
Q 019816           81 VCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPELEKEIKELAKADG--------NGQYPDGVIKMN  149 (335)
Q Consensus        81 ~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~~~--------~~~~p~~~~~~~  149 (335)
                      .++.++ ++|        +..+++++.+|..|.||||+|+..+..   +++++|.+.+        .+.+|++.....
T Consensus       102 ~~~~~~~~~L--------l~~g~~~~~~~~~g~t~L~~A~~~~~~---~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~  168 (223)
T 2f8y_A          102 LAVEGMLEDL--------INSHADVNAVDDLGKSALHWAAAVNNV---DAAVVLLKNGANKDMQNNREETPLFLAARE  168 (223)
T ss_dssp             HTCHHHHHHH--------HHTTCCTTCBCTTSCBHHHHHHHTTCH---HHHHHHHHTTCCTTCCCTTCCCHHHHHHHH
T ss_pred             hCcHHHHHHH--------HHcCCCCcCcCCCCCcHHHHHHHcCCH---HHHHHHHHcCCCCCCcCCCCcCHHHHHHHc
Confidence            999998 888        788999999999999999999987753   6777776643        345677665443

>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A

Probab=99.81  E-value=5e-20  Score=159.58  Aligned_cols=121  Identities=19%  Similarity=0.114  Sum_probs=93.7

Q ss_pred             CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHh
Q 019816            1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAA   80 (335)
Q Consensus         1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~   80 (335)
                      .||||.|++.|+.+.++.+++.++.....+|.+|+||||+|+..|+.+++++|+    ..+.+++.+|..|+||||+|+.
T Consensus         7 ~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll----~~g~~~~~~~~~g~t~L~~A~~   82 (231)
T 3aji_A            7 NIMICNLAYSGKLDELKERILADKSLATRTDQDSRTALHWACSAGHTEIVEFLL----QLGVPVNDKDDAGWSPLHIAAS   82 (231)
T ss_dssp             SSHHHHHHHHTCHHHHHHHHHHCGGGGGCCCTTSCCHHHHHHHHTCHHHHHHHH----HTTCCSCCCCTTSCCHHHHHHH
T ss_pred             cchHHHHHHhCCHHHHHHHHHhchhhhhcCCCCCCCHHHHHHHcCcHHHHHHHH----HhCCCCCCcCCCCCCHHHHHHH
Confidence            368888888888888888888877766667788888888888888888888888    4567788888888888888888


Q ss_pred             cCCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhcCCchHHHHHHHHHHc
Q 019816           81 VCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPELEKEIKELAKAD  136 (335)
Q Consensus        81 ~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~~  136 (335)
                      .|+.++ ++|        +..+.+++.+|..|.||||+|+..+..   +++++|.+.
T Consensus        83 ~~~~~~v~~L--------l~~g~~~~~~~~~g~t~L~~A~~~~~~---~~~~~Ll~~  128 (231)
T 3aji_A           83 AGXDEIVKAL--------LVKGAHVNAVNQNGCTPLHYAASKNRH---EIAVMLLEG  128 (231)
T ss_dssp             HTCHHHHHHH--------HHTTCCTTCCCTTSCCHHHHHHHTTCH---HHHHHHHHT
T ss_pred             cCHHHHHHHH--------HHcCCCCCCCCCCCCCHHHHHHHcCCH---HHHHHHHHc
Confidence            888777 777        677788888888888888888876643   566666553

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E

Probab=99.81  E-value=3.8e-20  Score=161.19  Aligned_cols=123  Identities=18%  Similarity=0.100  Sum_probs=73.4

Q ss_pred             chHhHHHhcCCHHHHHHHhhhCCCc-----cccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCC-CCCchh
Q 019816            2 TALHLAAGQGNDWIVQEIIQRCPEC-----CELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDV-KGNTPF   75 (335)
Q Consensus         2 TpLH~Aa~~G~~e~v~~Ll~~~~~~-----~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~-~G~TpL   75 (335)
                      ||||+|+..|+.++++.|++.+++.     ....|..|+||||+|+..|+.+++++|+    ..|++++.+|. +|+|||
T Consensus        80 t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll----~~g~~~~~~~~~~g~tpL  155 (236)
T 1ikn_D           80 TPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLV----SLGADVNAQEPCNGRTAL  155 (236)
T ss_dssp             CHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHH----HHTCCTTCCCTTTCCCHH
T ss_pred             CHHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHH----HcCCCCCCCCCCCCCCHH
Confidence            5666666666666666666655431     2334555666666666666666666666    45666666665 666666


Q ss_pred             HHHHhcCCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhcCCchHHHHHHHHHHcCCC
Q 019816           76 HVLAAVCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPELEKEIKELAKADGNG  139 (335)
Q Consensus        76 H~Aa~~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~~~~~  139 (335)
                      |+|+..|+.++ ++|        +..|++++.+|..|+||+|+|+..+..   +++++|.+.|+.
T Consensus       156 ~~A~~~~~~~~v~~L--------l~~ga~~~~~~~~g~tpl~~A~~~~~~---~~~~~Ll~~ga~  209 (236)
T 1ikn_D          156 HLAVDLQNPDLVSLL--------LKCGADVNRVTYQGYSPYQLTWGRPST---RIQQQLGQLTLE  209 (236)
T ss_dssp             HHHHHTTCHHHHHHH--------HTTTCCSCCCCTTCCCGGGGCTTSSCH---HHHHHHHTTSCG
T ss_pred             HHHHHcCCHHHHHHH--------HHcCCCCCcccCCCCCHHHHHHccCch---HHHHHHHHcchh
Confidence            66666666665 555        555666666666666666666655432   555555555543

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B

Probab=99.81  E-value=1.2e-20  Score=165.28  Aligned_cols=104  Identities=19%  Similarity=0.134  Sum_probs=83.4

Q ss_pred             chHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHhc
Q 019816            2 TALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAAV   81 (335)
Q Consensus         2 TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~~   81 (335)
                      ||||.|+..|+.++++.|++.+++++. +|..|+||||+|+..|+.+++++|+    ..++++|.+|.+|+||||+|+..
T Consensus        39 t~L~~A~~~g~~~~v~~Ll~~g~~~~~-~d~~g~t~L~~A~~~g~~~~v~~Ll----~~ga~~~~~d~~g~tpL~~A~~~  113 (239)
T 1ycs_B           39 ALLLDSSLEGEFDLVQRIIYEVDDPSL-PNDEGITALHNAVCAGHTEIVKFLV----QFGVNVNAADSDGWTPLHCAASC  113 (239)
T ss_dssp             HHHHHHHHHTCHHHHHHHTSTTSSCCC-CCTTSCCHHHHHHHHTCHHHHHHHH----HHTCCTTCCCTTCCCHHHHHHHT
T ss_pred             HHHHHHHHcCCHHHHHHHHHcCCCCCC-cCCCCCCHHHHHHHcCCHHHHHHHH----HcCCCCCccCCCCCCHHHHHHHc
Confidence            678888888888888888888877654 6788888888888888888888888    46778888888888888888888


Q ss_pred             CCCCc-ccccccCcccccccccccccccCCCC-CHHHHH
Q 019816           82 CPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNI-SVEHIN  118 (335)
Q Consensus        82 g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~-Tpl~~a  118 (335)
                      |+.++ ++|        +..|++++.+|..|. ||+|+|
T Consensus       114 ~~~~~v~~L--------l~~ga~~~~~~~~~~~t~l~~a  144 (239)
T 1ycs_B          114 NNVQVCKFL--------VESGAAVFAMTYSDMQTAADKC  144 (239)
T ss_dssp             TCHHHHHHH--------HHTTCCTTCCCSSSCCCHHHHC
T ss_pred             CCHHHHHHH--------HHcCCCcceecCCCCcchHHHH
Confidence            88777 777        777888888887766 888887

>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A

Probab=99.81  E-value=7.6e-20  Score=158.44  Aligned_cols=131  Identities=22%  Similarity=0.177  Sum_probs=98.5

Q ss_pred             CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHh
Q 019816            1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAA   80 (335)
Q Consensus         1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~   80 (335)
                      +||||+|+..|+.+++++|++.++++.. +|..|+||||+|+..|+.+++++|+    ..+.+++.+|.+|+||||+|+.
T Consensus        41 ~t~L~~A~~~g~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll----~~g~~~~~~~~~g~t~L~~A~~  115 (231)
T 3aji_A           41 RTALHWACSAGHTEIVEFLLQLGVPVND-KDDAGWSPLHIAASAGXDEIVKALL----VKGAHVNAVNQNGCTPLHYAAS  115 (231)
T ss_dssp             CCHHHHHHHHTCHHHHHHHHHTTCCSCC-CCTTSCCHHHHHHHHTCHHHHHHHH----HTTCCTTCCCTTSCCHHHHHHH
T ss_pred             CCHHHHHHHcCcHHHHHHHHHhCCCCCC-cCCCCCCHHHHHHHcCHHHHHHHHH----HcCCCCCCCCCCCCCHHHHHHH
Confidence            4788888888888888888888877754 6788888888888888888888888    4567788888888888888888


Q ss_pred             cCCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhcCCchHHHHHHHHHHcC--------CCCCCcchhh
Q 019816           81 VCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPELEKEIKELAKADG--------NGQYPDGVIK  147 (335)
Q Consensus        81 ~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~~~--------~~~~p~~~~~  147 (335)
                      .++.++ ++|        ...+.+++.+|..|.||+|+|+..+..   +++++|.+.+        .|.+|++...
T Consensus       116 ~~~~~~~~~L--------l~~g~~~~~~~~~g~t~L~~A~~~~~~---~~v~~Ll~~g~~~~~~~~~g~t~L~~A~  180 (231)
T 3aji_A          116 KNRHEIAVML--------LEGGANPDAKDHYDATAMHRAAAKGNL---KMVHILLFYKASTNIQDTEGNTPLHLAC  180 (231)
T ss_dssp             TTCHHHHHHH--------HHTTCCTTCCCTTSCCHHHHHHHHTCH---HHHHHHHHTTCCSCCCCTTSCCHHHHHH
T ss_pred             cCCHHHHHHH--------HHcCCCCCCcCCCCCcHHHHHHHcCCH---HHHHHHHhcCCCccccCCCCCCHHHHHH
Confidence            888777 777        667777788888888888888766543   5666655532        3445666544

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}

Probab=99.81  E-value=5.4e-20  Score=170.69  Aligned_cols=122  Identities=12%  Similarity=-0.016  Sum_probs=110.7

Q ss_pred             CchHhHHHhcC--CHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCccccc-----ccccCCCCCc
Q 019816            1 MTALHLAAGQG--NDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNL-----IFEKDVKGNT   73 (335)
Q Consensus         1 ~TpLH~Aa~~G--~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~-----~n~~d~~G~T   73 (335)
                      +||||+|+..|  +.+++++|++.+.+++. +|..|+||||+|+..|+.+++++|+    ..+++     +|.+|.+|+|
T Consensus       139 ~t~L~~A~~~g~~~~~~v~~Ll~~ga~~~~-~d~~g~t~L~~A~~~g~~~~v~~Ll----~~g~~~~~~~~~~~~~~g~t  213 (364)
T 3ljn_A          139 QTALHWCVGLGPEYLEMIKILVQLGASPTA-KDKADETPLMRAMEFRNREALDLMM----DTVPSKSSLRLDYANKQGNS  213 (364)
T ss_dssp             CCHHHHHHHSCGGGHHHHHHHHHHTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHH----HHCSCSSSCCTTCCCTTCCC
T ss_pred             CCHHHHHHHcCCchHHHHHHHHHcCCCCcc-cCCCCCCHHHHHHHcCCHHHHHHHH----hcccccccccccccCCCCCc
Confidence            58999999999  99999999999999865 7999999999999999999999999    35555     9999999999


Q ss_pred             hhHHHHhcCCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhcCCchHHHHHHHHHHcCC
Q 019816           74 PFHVLAAVCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPELEKEIKELAKADGN  138 (335)
Q Consensus        74 pLH~Aa~~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~~~~  138 (335)
                      |||+|+..|+.++ ++|        +..|++++.+|.+|+||||+|+..+..   +++++|.+.++
T Consensus       214 ~L~~A~~~g~~~~v~~L--------l~~gad~~~~d~~g~tpL~~A~~~g~~---~~v~~Ll~~~~  268 (364)
T 3ljn_A          214 HLHWAILINWEDVAMRF--------VEMGIDVNMEDNEHTVPLYLSVRAAMV---LLTKELLQKTD  268 (364)
T ss_dssp             TTHHHHTTTCHHHHHHH--------HTTTCCTTCCCTTSCCHHHHHHHTCCH---HHHHHHHHHSC
T ss_pred             HHHHHHHcCCHHHHHHH--------HHcCCCCCCCCCCCCCHHHHHHHhChH---HHHHHHHHcCC
Confidence            9999999999999 888        889999999999999999999988754   77777777543

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*

Probab=99.80  E-value=9.6e-20  Score=158.43  Aligned_cols=119  Identities=18%  Similarity=0.003  Sum_probs=74.0

Q ss_pred             CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCccc-ccccccCCCCCchhHHHH
Q 019816            1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVK-NLIFEKDVKGNTPFHVLA   79 (335)
Q Consensus         1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~-~~~n~~d~~G~TpLH~Aa   79 (335)
                      +||||+|+..|+.+++++|++.++++.. +|..|+||||+|+..|+.+++++|+    ..+ .+++.+|..|.||||+|+
T Consensus        45 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~~~~Ll----~~~~~~~~~~~~~g~t~L~~A~  119 (237)
T 3b7b_A           45 RTPLMEAAENNHLEAVKYLIKAGALVDP-KDAEGSTCLHLAAKKGHYEVVQYLL----SNGQMDVNCQDDGGWTPMIWAT  119 (237)
T ss_dssp             CCHHHHHHHTTCHHHHHHHHTTTCCCCC-CCTTSCCHHHHHHHTTCHHHHHHHH----TTTCCCTTCCCTTSCCHHHHHH
T ss_pred             CCHHHHHHHhCCHHHHHHHHhCCCCCCC-CCCCCCcHHHHHHHcCCHHHHHHHH----hCCCCCcccCCCCCCCHHHHHH
Confidence            3667777777777777777766666543 5666677777777777766666666    233 455666666666666666


Q ss_pred             hcCCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhcCCchHHHHHHHHHH
Q 019816           80 AVCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPELEKEIKELAKA  135 (335)
Q Consensus        80 ~~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~  135 (335)
                      ..++.++ ++|        +..|.+++.+|..|.||+|+|+..+..   +++++|.+
T Consensus       120 ~~~~~~~~~~L--------l~~g~~~~~~~~~g~t~L~~A~~~~~~---~~~~~Ll~  165 (237)
T 3b7b_A          120 EYKHVDLVKLL--------LSKGSDINIRDNEENICLHWAAFSGCV---DIAEILLA  165 (237)
T ss_dssp             HTTCHHHHHHH--------HHTTCCTTCCCTTSCCHHHHHHHHCCH---HHHHHHHT
T ss_pred             HcCCHHHHHHH--------HHCCCCCCccCCCCCCHHHHHHHCCCH---HHHHHHHH
Confidence            6666665 555        555666666666666666666655432   45555544

>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}

Probab=99.80  E-value=6.6e-20  Score=166.35  Aligned_cols=131  Identities=18%  Similarity=0.081  Sum_probs=113.5

Q ss_pred             chHhHHHhcCCHHHHHHHhhhCCCcccc-----ccCCCCchHHHHHhc---CCHhHHHHHHhcCCcccccccccCCCCCc
Q 019816            2 TALHLAAGQGNDWIVQEIIQRCPECCEL-----VDDRGWNVLHFAMVS---FDKSDLKHLLNEYPVVKNLIFEKDVKGNT   73 (335)
Q Consensus         2 TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~-----~d~~G~t~Lh~A~~~---g~~~~v~~Ll~~~~~~~~~~n~~d~~G~T   73 (335)
                      ++||.|+..|+.+.++.|++.+++++..     .|..|+||||+|+..   ++.+++++|+    ..|+++|.+|.+|+|
T Consensus       153 ~~L~~A~~~g~~~~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll----~~gadvn~~d~~G~T  228 (301)
T 2b0o_E          153 QRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFII----QNGGHLDAKAADGNT  228 (301)
T ss_dssp             HHHHHHHHTTCHHHHHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHH----HHSSCTTCCCTTCCC
T ss_pred             HHHhhhhhccCHHHHHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHH----hcCCCCCCCCCCCCC
Confidence            4699999999999999999999998653     588999999999997   8999999999    578999999999999


Q ss_pred             hhHHHHhcCCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhcCCchHHHHHHHHHHcC--CCCCCcchhh
Q 019816           74 PFHVLAAVCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPELEKEIKELAKADG--NGQYPDGVIK  147 (335)
Q Consensus        74 pLH~Aa~~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~~~--~~~~p~~~~~  147 (335)
                      |||+|+..|+.++ ++|        +..|++++.+|.+|+||||+|+..+..   +++++|.+.+  .+.+|++...
T Consensus       229 pLh~A~~~g~~~~v~~L--------l~~gad~~~~d~~G~TpL~~A~~~~~~---~iv~~Ll~~ga~~g~tpLh~A~  294 (301)
T 2b0o_E          229 ALHYAALYNQPDCLKLL--------LKGRALVGTVNEAGETALDIARKKHHK---ECEELLEQAQAGTFAFPLHVDY  294 (301)
T ss_dssp             HHHHHHHTTCHHHHHHH--------HHTTCCCSCCCTTSCCHHHHHHHHTCH---HHHHHHHHHHHHTTSSCCC---
T ss_pred             HHHHHHHcCCHHHHHHH--------HHcCCCCCCcCCCCCCHHHHHHHcCCH---HHHHHHHHhcCCCCCChhHHHH
Confidence            9999999999999 888        889999999999999999999987754   6777666633  4667887654

>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*

Probab=99.80  E-value=4.6e-20  Score=164.35  Aligned_cols=123  Identities=12%  Similarity=-0.022  Sum_probs=104.2

Q ss_pred             CchHhHHHhc---CCHHHHHHHhhhCCCcc----------ccccCCCCchHHHHHhcCCHhHHHHHHhcCCccccccccc
Q 019816            1 MTALHLAAGQ---GNDWIVQEIIQRCPECC----------ELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEK   67 (335)
Q Consensus         1 ~TpLH~Aa~~---G~~e~v~~Ll~~~~~~~----------~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~   67 (335)
                      +||||+|+..   |+.+++++|++.+++..          ...|..|+||||+|+..|+.+++++|+    ..|++++.+
T Consensus        55 ~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll----~~ga~~~~~  130 (273)
T 2pnn_A           55 KTCLLKAMLNLHNGQNDTIALLLDVARKTDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLV----ENGADVQAA  130 (273)
T ss_dssp             CCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCHHHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHH----HTTCCTTCC
T ss_pred             CCHHHHHHHHHhcCChHHHHHHHHhhccccchhHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHH----HCCCCcCcc
Confidence            5999999986   99999999999875421          114678999999999999999999999    468899999


Q ss_pred             CC--------------CCCchhHHHHhcCCCCc-ccccccCcccccc---cccccccccCCCCCHHHHHHhcCCch----
Q 019816           68 DV--------------KGNTPFHVLAAVCPDPR-PYNAGYGIIPYKI---AKGYYQAVNKQNISVEHINRYGFPEL----  125 (335)
Q Consensus        68 d~--------------~G~TpLH~Aa~~g~~~~-~lL~~~~~~~~~~---~~~~~~~~n~~G~Tpl~~a~~~~~~~----  125 (335)
                      |.              +|+||||+|+..|+.++ ++|        +.   .|++++.+|.+|+||||+|+..+...    
T Consensus       131 ~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~L--------l~~~~~gad~~~~d~~g~tpLh~A~~~~~~~~~~~  202 (273)
T 2pnn_A          131 ANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFL--------LQNSWQPADISARDSVGNTVLHALVEVADNTVDNT  202 (273)
T ss_dssp             BCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHH--------HHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHH
T ss_pred             ccccccccccccccccCCCCHHHHHHHcCCHHHHHHH--------HhcccCCCCceeeCCCCCcHHHHHHHccCcchhHH
Confidence            87              79999999999999999 888        77   89999999999999999999765421    


Q ss_pred             --HHHHHHHHHH
Q 019816          126 --EKEIKELAKA  135 (335)
Q Consensus       126 --~~~i~~~l~~  135 (335)
                        ..++++.|.+
T Consensus       203 ~~~~~~v~~Ll~  214 (273)
T 2pnn_A          203 KFVTSMYNEILI  214 (273)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHH
Confidence              1456666655

>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1

Probab=99.80  E-value=6e-20  Score=168.42  Aligned_cols=124  Identities=16%  Similarity=0.080  Sum_probs=101.7

Q ss_pred             CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCC---HhHHHHHHhcCCcccccccccCCCCCchhHH
Q 019816            1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFD---KSDLKHLLNEYPVVKNLIFEKDVKGNTPFHV   77 (335)
Q Consensus         1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~---~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~   77 (335)
                      +||||+||..|+.+++++|++++++++. +|.+|+||||+|+.+|+   .++++.|++.   ...+++.+|.+|+||||+
T Consensus       132 ~TpLh~Aa~~g~~~~v~~Ll~~Gad~n~-~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~---~~~~~~~~d~~g~tpLh~  207 (327)
T 1sw6_A          132 NTPLHWLTSIANLELVKHLVKHGSNRLY-GDNMGESCLVKAVKSVNNYDSGTFEALLDY---LYPCLILEDSMNRTILHH  207 (327)
T ss_dssp             CCHHHHHHHTTCHHHHHHHHHTTCCTTB-CCTTCCCHHHHHHHSSHHHHTTCHHHHHHH---HGGGGGEECTTCCCHHHH
T ss_pred             CcHHHHHHHcCCHHHHHHHHHcCCCCCC-cCCCCCCHHHHHHHhcccccHHHHHHHHHh---hhccccCCCCCCCCHHHH
Confidence            5999999999999999999999999965 89999999999999998   6777777732   226799999999999999


Q ss_pred             HHh----cCCCCc-ccccccCcccccccc--------------------c-------------------------ccccc
Q 019816           78 LAA----VCPDPR-PYNAGYGIIPYKIAK--------------------G-------------------------YYQAV  107 (335)
Q Consensus        78 Aa~----~g~~~~-~lL~~~~~~~~~~~~--------------------~-------------------------~~~~~  107 (335)
                      |+.    .|+.++ ++|        +..+                    +                         +++.+
T Consensus       208 A~~~~~~~g~~~~v~~L--------l~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~~~~Ll~~~~n~~  279 (327)
T 1sw6_A          208 IIITSGMTGCSAAAKYY--------LDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLNAQ  279 (327)
T ss_dssp             HHHHHTSTTCHHHHHHH--------HHHHHHHHHHGGGCCEEEC----------------CHHHHHCSHHHHHHHTTTCC
T ss_pred             HHHHccccccHHHHHHH--------HHHHHHHHhcccchHHHhhhhcccCCcccccccCCChhHHHHHHHHHHHhCCCCC
Confidence            998    677776 554        2211                    1                         57888


Q ss_pred             cCCCCCHHHHHHhcCCchHHHHHHHHHHcCCC
Q 019816          108 NKQNISVEHINRYGFPELEKEIKELAKADGNG  139 (335)
Q Consensus       108 n~~G~Tpl~~a~~~~~~~~~~i~~~l~~~~~~  139 (335)
                      |.+|+||||+|+..+..   ++++.|.+.|+.
T Consensus       280 d~~G~TpLh~A~~~g~~---~~v~~Ll~~Gad  308 (327)
T 1sw6_A          280 DSNGDTCLNIAARLGNI---SIVDALLDYGAD  308 (327)
T ss_dssp             CTTSCCHHHHHHHHCCH---HHHHHHHHTTCC
T ss_pred             CCCCCCHHHHHHHcCCH---HHHHHHHHcCCC
Confidence            99999999999988754   788888876654

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*

Probab=99.80  E-value=1.3e-19  Score=157.68  Aligned_cols=135  Identities=25%  Similarity=0.148  Sum_probs=116.1

Q ss_pred             CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHh
Q 019816            1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAA   80 (335)
Q Consensus         1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~   80 (335)
                      +||||+|+..|+.+++++|++.++......|..|+||||+|+..|+.+++++|+    ..+.+++.+|.+|+||||+|+.
T Consensus        78 ~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll----~~g~~~~~~~~~g~t~L~~A~~  153 (237)
T 3b7b_A           78 STCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLL----SKGSDINIRDNEENICLHWAAF  153 (237)
T ss_dssp             CCHHHHHHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH----HTTCCTTCCCTTSCCHHHHHHH
T ss_pred             CcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHH----HCCCCCCccCCCCCCHHHHHHH
Confidence            589999999999999999999985444558999999999999999999999999    5788999999999999999999


Q ss_pred             cCCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhcCCchHHHHHHHHHHcC--------CCCCCcchhhhhh
Q 019816           81 VCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPELEKEIKELAKADG--------NGQYPDGVIKMNK  150 (335)
Q Consensus        81 ~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~~~--------~~~~p~~~~~~~~  150 (335)
                      .|+.++ ++|        +..+++++.+|..|.||+|+|+..+..   ++++.|.+.+        .|.+|++......
T Consensus       154 ~~~~~~~~~L--------l~~g~~~~~~~~~g~t~L~~A~~~~~~---~~v~~Ll~~gad~~~~d~~g~t~l~~A~~~~  221 (237)
T 3b7b_A          154 SGCVDIAEIL--------LAAKCDLHAVNIHGDSPLHIAARENRY---DCVVLFLSRDSDVTLKNKEGETPLQCASLNS  221 (237)
T ss_dssp             HCCHHHHHHH--------HTTTCCTTCCCTTCCCHHHHHHHTTCH---HHHHHHHTTTCCTTCCCTTSCCHHHHSCTTC
T ss_pred             CCCHHHHHHH--------HHcCCCCCCcCCCCCCHHHHHHHhCCH---hHHHHHHHcCCCCCccCCCCCCHHHHHHHHH
Confidence            999998 888        888999999999999999999988754   7778777644        3456766554433

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A

Probab=99.79  E-value=2.1e-19  Score=156.40  Aligned_cols=123  Identities=18%  Similarity=0.065  Sum_probs=80.1

Q ss_pred             CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHh
Q 019816            1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAA   80 (335)
Q Consensus         1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~   80 (335)
                      +||||+|+..|+.+++++|++.++++.. .|..|+||||+|+..|+.++++.|++.....+.+++.+|.+|+||||+|+.
T Consensus        47 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~  125 (241)
T 1k1a_A           47 QTPLHLAVITTLPSVVRLLVTAGASPMA-LDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVN  125 (241)
T ss_dssp             CCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHH
T ss_pred             CCHHHHHHHcCCHHHHHHHHHcCCCccc-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccccCcCCCcHHHHHHH
Confidence            4777777777777777777777777644 577777777777777777777777743222223566666667777777766


Q ss_pred             cCCCCc-ccccccCccccccccccccccc-CCCCCHHHHHHhcCCchHHHHHHHHHH
Q 019816           81 VCPDPR-PYNAGYGIIPYKIAKGYYQAVN-KQNISVEHINRYGFPELEKEIKELAKA  135 (335)
Q Consensus        81 ~g~~~~-~lL~~~~~~~~~~~~~~~~~~n-~~G~Tpl~~a~~~~~~~~~~i~~~l~~  135 (335)
                      .|+.++ ++|        +..+.+++.++ ..|.||||+|+..+..   +++++|.+
T Consensus       126 ~~~~~~~~~L--------l~~g~~~~~~~~~~g~t~L~~A~~~~~~---~~v~~Ll~  171 (241)
T 1k1a_A          126 TECQETVQLL--------LERGADIDAVDIKSGRSPLIHAVENNSL---SMVQLLLQ  171 (241)
T ss_dssp             HTCHHHHHHH--------HHTTCCTTCCCTTTCCCHHHHHHHTTCH---HHHHHHHH
T ss_pred             cCCHHHHHHH--------HHcCCCcccccccCCCcHHHHHHHcCCH---HHHHHHHH
Confidence            666666 555        55566666666 5666666666655532   45555544

>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A

Probab=99.79  E-value=3.1e-20  Score=163.77  Aligned_cols=124  Identities=15%  Similarity=0.018  Sum_probs=104.7

Q ss_pred             CchHhHHHhc---CCHHHHHHHhhhCCCcccc----------ccCCCCchHHHHHhcCCHhHHHHHHhcCCccccccccc
Q 019816            1 MTALHLAAGQ---GNDWIVQEIIQRCPECCEL----------VDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEK   67 (335)
Q Consensus         1 ~TpLH~Aa~~---G~~e~v~~Ll~~~~~~~~~----------~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~   67 (335)
                      +||||+|+..   |+.+++++|++.+++....          .|..|+||||+|+..|+.+++++|+    ..|+++|.+
T Consensus        44 ~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll----~~ga~~~~~  119 (256)
T 2etb_A           44 KTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLV----ENGADVHLR  119 (256)
T ss_dssp             BCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHH----HTTCCTTCC
T ss_pred             CCHHHHHHHccccchHHHHHHHHhcCCcccchhhhcccccccccccCCCHHHHHHHcCCHHHHHHHH----HcCCCCCcc
Confidence            5899999999   9999999999998765421          3478999999999999999999999    568899999


Q ss_pred             CCC-------------CCchhHHHHhcCCCCc-ccccccCcccccc---cccccccccCCCCCHHHHHHh--cCCch---
Q 019816           68 DVK-------------GNTPFHVLAAVCPDPR-PYNAGYGIIPYKI---AKGYYQAVNKQNISVEHINRY--GFPEL---  125 (335)
Q Consensus        68 d~~-------------G~TpLH~Aa~~g~~~~-~lL~~~~~~~~~~---~~~~~~~~n~~G~Tpl~~a~~--~~~~~---  125 (335)
                      |..             |+||||+|+..|+.++ ++|        +.   .|++++.+|.+|+||||+|+.  .+...   
T Consensus       120 ~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~L--------l~~~~~ga~~n~~d~~g~TpLh~A~~~~~~~~~~~~  191 (256)
T 2etb_A          120 ACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYL--------LENPHQPASLEATDSLGNTVLHALVMIADNSPENSA  191 (256)
T ss_dssp             CCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHH--------HHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHH
T ss_pred             cccccccccccccccCCCCHHHHHHHcCCHHHHHHH--------HhccccCCCcCccCCCCCCHHHHHHHcccCCchhhH
Confidence            886             9999999999999999 888        77   899999999999999999997  33321   


Q ss_pred             -HHHHHHHHHHc
Q 019816          126 -EKEIKELAKAD  136 (335)
Q Consensus       126 -~~~i~~~l~~~  136 (335)
                       ..+++++|.+.
T Consensus       192 ~~~~iv~~Ll~~  203 (256)
T 2etb_A          192 LVIHMYDGLLQM  203 (256)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHc
Confidence             11266666653

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A

Probab=99.79  E-value=3.5e-20  Score=161.35  Aligned_cols=133  Identities=17%  Similarity=0.058  Sum_probs=115.7

Q ss_pred             CchHhHHHhcCCHHHHHHHhhhCC----CccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccC-CCCCchh
Q 019816            1 MTALHLAAGQGNDWIVQEIIQRCP----ECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKD-VKGNTPF   75 (335)
Q Consensus         1 ~TpLH~Aa~~G~~e~v~~Ll~~~~----~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d-~~G~TpL   75 (335)
                      +||||+|+..|+.++++.|++.++    +. ...|..|+||||+|+..|+.++++.|+    ..+.+++.+| ..|+|||
T Consensus        80 ~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~-~~~~~~g~t~L~~A~~~~~~~~~~~Ll----~~g~~~~~~~~~~g~t~L  154 (241)
T 1k1a_A           80 QTAAHLACEHRSPTCLRALLDSAAPGTLDL-EARNYDGLTALHVAVNTECQETVQLLL----ERGADIDAVDIKSGRSPL  154 (241)
T ss_dssp             CCHHHHHHHTTCHHHHHHHHHHSCTTSCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHH----HTTCCTTCCCTTTCCCHH
T ss_pred             CCHHHHHHHcCCHHHHHHHHHcCCCccccc-cccCcCCCcHHHHHHHcCCHHHHHHHH----HcCCCcccccccCCCcHH
Confidence            589999999999999999999987    55 447899999999999999999999999    5688999998 8899999


Q ss_pred             HHHHhcCCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhcCCchHHHHHHHHHHcC--------CCCCCcchh
Q 019816           76 HVLAAVCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPELEKEIKELAKADG--------NGQYPDGVI  146 (335)
Q Consensus        76 H~Aa~~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~~~--------~~~~p~~~~  146 (335)
                      |+|+..|+.++ ++|        +..|++++.+|.+|+||||+|+..+..   +++++|.+.|        .|.+|++..
T Consensus       155 ~~A~~~~~~~~v~~L--------l~~g~~~~~~~~~g~t~L~~A~~~~~~---~~v~~Ll~~ga~~~~~~~~g~tpl~~A  223 (241)
T 1k1a_A          155 IHAVENNSLSMVQLL--------LQHGANVNAQMYSGSSALHSASGRGLL---PLVRTLVRSGADSSLKNCHNDTPLMVA  223 (241)
T ss_dssp             HHHHHTTCHHHHHHH--------HHTTCCTTCBCTTSCBHHHHHHHHTCH---HHHHHHHHTTCCTTCCCTTSCCTTTTC
T ss_pred             HHHHHcCCHHHHHHH--------HHcCCCCCCcCCCCCCHHHHHHHcCCH---HHHHHHHhcCCCCCCcCCCCCCHHHHH
Confidence            99999999999 888        888999999999999999999987754   7778777744        355777765


Q ss_pred             hhh
Q 019816          147 KMN  149 (335)
Q Consensus       147 ~~~  149 (335)
                      ...
T Consensus       224 ~~~  226 (241)
T 1k1a_A          224 RSR  226 (241)
T ss_dssp             SSH
T ss_pred             Hhc
Confidence            543

>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*

Probab=99.79  E-value=4.3e-20  Score=163.11  Aligned_cols=124  Identities=15%  Similarity=0.079  Sum_probs=103.9

Q ss_pred             CchHhHHH---hcCCHHHHHHHhhhCCCc----------cccccCCCCchHHHHHhcCCHhHHHHHHhcCCccccccccc
Q 019816            1 MTALHLAA---GQGNDWIVQEIIQRCPEC----------CELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEK   67 (335)
Q Consensus         1 ~TpLH~Aa---~~G~~e~v~~Ll~~~~~~----------~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~   67 (335)
                      +||||+|+   +.|+.++++.|++.+++.          ....|..|+||||+|+..|+.+++++|+    ..|+++|.+
T Consensus        47 ~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll----~~ga~~~~~  122 (260)
T 3jxi_A           47 KTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFINSPFRDVYYRGQTALHIAIERRCKHYVELLV----EKGADVHAQ  122 (260)
T ss_dssp             CCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHHTCCBCCSSEESBCHHHHHHHTTCHHHHHHHH----HTTCCTTCC
T ss_pred             CcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhhhcccccccccCCCCHHHHHHHcCCHHHHHHHH----hCCCCcCcc
Confidence            59999999   789999999999987542          1224558999999999999999999999    578899999


Q ss_pred             C--------------CCCCchhHHHHhcCCCCc-ccccccCcccccc---cccccccccCCCCCHHHHHHhcCCch----
Q 019816           68 D--------------VKGNTPFHVLAAVCPDPR-PYNAGYGIIPYKI---AKGYYQAVNKQNISVEHINRYGFPEL----  125 (335)
Q Consensus        68 d--------------~~G~TpLH~Aa~~g~~~~-~lL~~~~~~~~~~---~~~~~~~~n~~G~Tpl~~a~~~~~~~----  125 (335)
                      |              .+|+||||+|+..|+.++ ++|        +.   .|++++.+|.+|+||||+|+..+...    
T Consensus       123 ~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~L--------l~~~~~ga~~~~~d~~g~TpLh~A~~~~~~~~~~~  194 (260)
T 3jxi_A          123 ARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYL--------TENGHKQADLRRQDSRGNTVLHALVAIADNTRENT  194 (260)
T ss_dssp             CEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHH--------HHCSSCCCCTTCCCTTSCCHHHHHHHHCCSSHHHH
T ss_pred             ccccccCcccccccccCCCCHHHHHHHcCCHHHHHHH--------HhccccCCCCcccCCCCCcHHHHHHHhccCchhHH
Confidence            8              689999999999999999 888        77   89999999999999999999655421    


Q ss_pred             --HHHHHHHHHHc
Q 019816          126 --EKEIKELAKAD  136 (335)
Q Consensus       126 --~~~i~~~l~~~  136 (335)
                        ..++++.|.+.
T Consensus       195 ~~~~~~v~~Ll~~  207 (260)
T 3jxi_A          195 KFVTKMYDLLLIK  207 (260)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHh
Confidence              13566666553

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}

Probab=99.79  E-value=1.2e-19  Score=163.15  Aligned_cols=121  Identities=16%  Similarity=-0.103  Sum_probs=109.5

Q ss_pred             CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHh
Q 019816            1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAA   80 (335)
Q Consensus         1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~   80 (335)
                      +||||+|+..|+.++++.|++.+++++..   +|+||||+|+..|+.+++++|+    ..|+++|.+|..|+||||+|+.
T Consensus        32 ~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~---~g~t~L~~A~~~g~~~~v~~Ll----~~ga~~~~~d~~g~t~L~~A~~  104 (285)
T 3kea_A           32 HSASYYAIADNNVRLVCTLLNAGALKNLL---ENEFPLHQAATLEDTKIVKILL----FSGLDDSQFDDKGNTALYYAVD  104 (285)
T ss_dssp             CCHHHHHHHTTCHHHHHHHHHTTGGGSCC---TTCCHHHHHTTSSSCHHHHHHH----HTTCCTTCCCTTSCCHHHHHHH
T ss_pred             CCHHHHHHHcCCHHHHHHHHhCCCCCCCC---CCCCHHHHHHHcCCHHHHHHHH----HCCCCCCCcCCCCCcHHHHHHH
Confidence            58999999999999999999999887553   5999999999999999999999    5789999999999999999999


Q ss_pred             cCCCCc-ccccccCcccccccccccccccCCC-CCHHHHHHhcCCchHHHHHHHHHHcCCC
Q 019816           81 VCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQN-ISVEHINRYGFPELEKEIKELAKADGNG  139 (335)
Q Consensus        81 ~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G-~Tpl~~a~~~~~~~~~~i~~~l~~~~~~  139 (335)
                      .|+.++ ++|        +..|++++.+|..| .||||+|+..+..   +++++|.+.++.
T Consensus       105 ~g~~~~v~~L--------l~~ga~~~~~~~~g~~t~L~~A~~~~~~---~~v~~Ll~~g~~  154 (285)
T 3kea_A          105 SGNMQTVKLF--------VKKNWRLMFYGKTGWKTSFYHAVMLNDV---SIVSYFLSEIPS  154 (285)
T ss_dssp             TTCHHHHHHH--------HHHCGGGGGCSSSGGGSHHHHHHHTTCH---HHHHHHHTTSCT
T ss_pred             cCCHHHHHHH--------HhcCCCCCccCCCCCCCHHHHHHHcCCH---HHHHHHHhCCCc
Confidence            999999 888        88899999999999 8999999988754   788888876543

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1

Probab=99.79  E-value=1.3e-19  Score=134.72  Aligned_cols=84  Identities=27%  Similarity=0.254  Sum_probs=79.2

Q ss_pred             CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHh
Q 019816            1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAA   80 (335)
Q Consensus         1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~   80 (335)
                      +||||+|+..|+.+++++|++.+++++. +|..|+||||+|+..|+.+++++|+    ..|++++.+|.+|+||||+|+.
T Consensus         3 ~t~L~~A~~~~~~~~v~~Ll~~g~~~n~-~d~~g~t~L~~A~~~~~~~~v~~Ll----~~ga~~~~~d~~g~t~l~~A~~   77 (93)
T 1n0q_A            3 RTPLHLAARNGHLEVVKLLLEAGADVNA-KDKNGRTPLHLAARNGHLEVVKLLL----EAGADVNAKDKNGRTPLHLAAR   77 (93)
T ss_dssp             CCHHHHHHHHTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHH----HTTCCTTCCCTTSCCHHHHHHH
T ss_pred             CcHHHHHHHcCCHHHHHHHHHcCCCCcc-cCCCCCCHHHHHHHcCCHHHHHHHH----HcCCCCCccCCCCCCHHHHHHH
Confidence            6999999999999999999999999865 7999999999999999999999999    5789999999999999999999


Q ss_pred             cCCCCc-ccc
Q 019816           81 VCPDPR-PYN   89 (335)
Q Consensus        81 ~g~~~~-~lL   89 (335)
                      .|+.++ ++|
T Consensus        78 ~~~~~~~~~L   87 (93)
T 1n0q_A           78 NGHLEVVKLL   87 (93)
T ss_dssp             TTCHHHHHHH
T ss_pred             cCCHHHHHHH
Confidence            999988 777

>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}

Probab=99.78  E-value=1.3e-19  Score=139.97  Aligned_cols=102  Identities=20%  Similarity=0.125  Sum_probs=93.7

Q ss_pred             CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHh
Q 019816            1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAA   80 (335)
Q Consensus         1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~   80 (335)
                      +||||+|+..|+.++++.|++.+++++. +|..|+||||+|+..++.+++++|+    ..+++++.+|.+|+||||+|+.
T Consensus        10 ~t~L~~A~~~~~~~~~~~Ll~~g~~~~~-~d~~g~t~L~~A~~~~~~~~~~~Ll----~~g~~~~~~d~~g~tpl~~A~~   84 (115)
T 2l6b_A           10 NTPLHNAAKNGHAEEVKKLLSKGADVNA-RSKDGNTPLHLAAKNGHAEIVKLLL----AKGADVNARSKDGNTPEHLAKK   84 (115)
T ss_dssp             CCHHHHHHHHTCHHHHHHHTTTTCCSSC-CCSSSCCTTHHHHTTTCHHHHHHHT----TTTCCTTCCCTTCCCTTHHHHT
T ss_pred             CCHHHHHHHcCCHHHHHHHHHcCCCCCC-cCCCCCCHHHHHHHcCcHHHHHHHH----HcCCCCcccCCCCCCHHHHHHH
Confidence            5899999999999999999999998855 7999999999999999999999999    5789999999999999999999


Q ss_pred             cCCCCc-ccccccCcccccccccccccccCCCCCHH
Q 019816           81 VCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVE  115 (335)
Q Consensus        81 ~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl  115 (335)
                      .++.++ ++|        +..|++++.++..|.||-
T Consensus        85 ~~~~~~~~~L--------l~~ga~~n~~~~~~~~~~  112 (115)
T 2l6b_A           85 NGHHEIVKLL--------DAKGADVNARSWGSSHHH  112 (115)
T ss_dssp             TTCHHHHHHH--------HTTSSSHHHHSCCCC---
T ss_pred             CCCHHHHHHH--------HHcCCCCCcCCccccccc
Confidence            999998 888        889999999999999884

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B

Probab=99.78  E-value=1.2e-19  Score=158.90  Aligned_cols=122  Identities=8%  Similarity=-0.084  Sum_probs=83.2

Q ss_pred             CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHh
Q 019816            1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAA   80 (335)
Q Consensus         1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~   80 (335)
                      .||||.|++.|+.+.++.|++++.++..  +..|.||||+|+..|+.++++.|+    ..++++|.+|.+|+||||+|+.
T Consensus         6 ~t~L~~a~~~~~~~~~~~ll~~g~~~~~--~~~~~t~L~~A~~~g~~~~v~~Ll----~~g~~~~~~d~~g~t~L~~A~~   79 (239)
T 1ycs_B            6 QVSLPPGKRTNLRKTGSERIAHGMRVKF--NPLPLALLLDSSLEGEFDLVQRII----YEVDDPSLPNDEGITALHNAVC   79 (239)
T ss_dssp             ---------------------------------CHHHHHHHHHHTCHHHHHHHT----STTSSCCCCCTTSCCHHHHHHH
T ss_pred             cccCchhhhhhhHHHHHHHhccCCCccc--CchhhHHHHHHHHcCCHHHHHHHH----HcCCCCCCcCCCCCCHHHHHHH
Confidence            5899999999999999999999998854  578999999999999999999999    5788999999999999999999


Q ss_pred             cCCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhcCCchHHHHHHHHHHcCCC
Q 019816           81 VCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPELEKEIKELAKADGNG  139 (335)
Q Consensus        81 ~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~~~~~  139 (335)
                      .|+.++ ++|        +..|++++.+|.+|+||||+|+..+..   ++++.|.+.++.
T Consensus        80 ~g~~~~v~~L--------l~~ga~~~~~d~~g~tpL~~A~~~~~~---~~v~~Ll~~ga~  128 (239)
T 1ycs_B           80 AGHTEIVKFL--------VQFGVNVNAADSDGWTPLHCAASCNNV---QVCKFLVESGAA  128 (239)
T ss_dssp             HTCHHHHHHH--------HHHTCCTTCCCTTCCCHHHHHHHTTCH---HHHHHHHHTTCC
T ss_pred             cCCHHHHHHH--------HHcCCCCCccCCCCCCHHHHHHHcCCH---HHHHHHHHcCCC
Confidence            999999 888        888999999999999999999988754   788888876644

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1

Probab=99.78  E-value=5e-19  Score=157.29  Aligned_cols=124  Identities=14%  Similarity=0.028  Sum_probs=113.1

Q ss_pred             CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHh
Q 019816            1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAA   80 (335)
Q Consensus         1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~   80 (335)
                      +||||.|++.|+.++++.|++.+++++...|..|+||||+|+..|+.+++++|+    ..+.+++.+|.+|+||||+|+.
T Consensus         6 ~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll----~~g~~~~~~~~~g~t~L~~A~~   81 (285)
T 1wdy_A            6 NHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLL----RHGADPVLRKKNGATPFLLAAI   81 (285)
T ss_dssp             HHHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHH----HTTCCTTCCCTTCCCHHHHHHH
T ss_pred             chHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHH----HcCCCCcccCCCCCCHHHHHHH
Confidence            379999999999999999999999987756889999999999999999999999    5688999999999999999999


Q ss_pred             cCCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhcCCchHHHHHHHHHHcCCC
Q 019816           81 VCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPELEKEIKELAKADGNG  139 (335)
Q Consensus        81 ~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~~~~~  139 (335)
                      .|+.++ ++|        +..+.+++.+|..|.||||+|+..+..   +++++|.+.+..
T Consensus        82 ~~~~~~v~~L--------l~~g~~~~~~~~~g~t~L~~A~~~~~~---~~~~~Ll~~g~~  130 (285)
T 1wdy_A           82 AGSVKLLKLF--------LSKGADVNECDFYGFTAFMEAAVYGKV---KALKFLYKRGAN  130 (285)
T ss_dssp             HTCHHHHHHH--------HHTTCCTTCBCTTCCBHHHHHHHTTCH---HHHHHHHHTTCC
T ss_pred             cCCHHHHHHH--------HHcCCCCCccCcccCCHHHHHHHhCCH---HHHHHHHHhCCC
Confidence            999999 888        788999999999999999999988754   788888876654

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1

Probab=99.77  E-value=6.6e-19  Score=167.23  Aligned_cols=121  Identities=20%  Similarity=0.134  Sum_probs=77.6

Q ss_pred             chHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHhc
Q 019816            2 TALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAAV   81 (335)
Q Consensus         2 TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~~   81 (335)
                      ||||+|+..|+.+++++|++++++.+. .|..|+||||+|+..|+.++++.|+    ..+.++|.+|..|+||||+|+..
T Consensus       247 t~L~~A~~~g~~~~v~~Ll~~~~~~~~-~~~~g~t~L~~A~~~~~~~~~~~Ll----~~g~~~~~~~~~g~t~L~~A~~~  321 (437)
T 1n11_A          247 TPLHLAAQEGHAEMVALLLSKQANGNL-GNKSGLTPLHLVAQEGHVPVADVLI----KHGVMVDATTRMGYTPLHVASHY  321 (437)
T ss_dssp             CHHHHHHHTTCHHHHHHHHTTTCCTTC-CCTTCCCHHHHHHHHTCHHHHHHHH----HHTCCTTCCCSSCCCHHHHHHHS
T ss_pred             CHHHHHHHCCCHHHHHHHHhcCCCCCC-CCCCCCCHHHHHHHcCCHHHHHHHH----hCCccCCCCCCCCCCHHHHHHHc
Confidence            566666666666666666666665533 4666666666666666666666666    34566666666777777777777


Q ss_pred             CCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhcCCchHHHHHHHHHHcCC
Q 019816           82 CPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPELEKEIKELAKADGN  138 (335)
Q Consensus        82 g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~~~~  138 (335)
                      |+.++ ++|        +..|++++.+|..|+||||+|+..+..   +++++|.++|+
T Consensus       322 g~~~~v~~L--------l~~gad~n~~~~~g~t~L~~A~~~g~~---~iv~~Ll~~ga  368 (437)
T 1n11_A          322 GNIKLVKFL--------LQHQADVNAKTKLGYSPLHQAAQQGHT---DIVTLLLKNGA  368 (437)
T ss_dssp             SCSHHHHHH--------HHTTCCTTCCCTTSCCHHHHHHHTTCH---HHHHHHHHTTC
T ss_pred             CcHHHHHHH--------HhcCCCCCCCCCCCCCHHHHHHHCChH---HHHHHHHHCcC
Confidence            66666 666        566677777777777777777766533   56666666443

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}

Probab=99.77  E-value=7e-19  Score=158.07  Aligned_cols=120  Identities=17%  Similarity=-0.021  Sum_probs=104.3

Q ss_pred             CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHh
Q 019816            1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAA   80 (335)
Q Consensus         1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~   80 (335)
                      +||||+||..|+.++++.|++.+++++. +|.+|+||||+|+..|+.+++++|+    ..+++++.+|.+|+||||+|+.
T Consensus        60 ~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~g~~~~v~~Ll----~~ga~~~~~~~~g~t~L~~A~~  134 (285)
T 3d9h_A           60 WSPMHEAAIHGHQLSLRNLISQGWAVNI-ITADHVSPLHEACLGGHLSCVKILL----KHGAQVNGVTADWHTPLFNACV  134 (285)
T ss_dssp             CCHHHHHHHTTCHHHHHHHHHTTCCSCE-ECTTCCCHHHHHHHTTCHHHHHHHH----HTTCCSSCCCTTCCCHHHHHHH
T ss_pred             CCHHHHHHHcCCHHHHHHHHHCCCCCCC-cCCCCCCHHHHHHHCCcHHHHHHHH----HCCCCCCCCCCCCCCHHHHHHH
Confidence            5899999999999999999999998865 7999999999999999999999999    4688999999999999999999


Q ss_pred             cCCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhcCCchHHHHHHHHHHcC
Q 019816           81 VCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPELEKEIKELAKADG  137 (335)
Q Consensus        81 ~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~~~  137 (335)
                      .|+.++ ++|        +..+.+++..+ +|.||||+|+..+..   ++++.|.+.+
T Consensus       135 ~~~~~~v~~L--------l~~g~~~~~~~-~g~t~L~~A~~~g~~---~~v~~Ll~~g  180 (285)
T 3d9h_A          135 SGSWDCVNLL--------LQHGASVQPES-DLASPIHEAARRGHV---ECVNSLIAYG  180 (285)
T ss_dssp             HTCHHHHHHH--------HHTTCCSSCSC-TTSCHHHHHHHHTCH---HHHHHHHHTT
T ss_pred             cCHHHHHHHH--------HHCCCCCCCCC-CCCCHHHHHHHcCCH---HHHHHHHHCC
Confidence            999998 887        77777777544 489999999977744   6777776644

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}

Probab=99.77  E-value=1.2e-18  Score=159.62  Aligned_cols=95  Identities=26%  Similarity=0.126  Sum_probs=75.6

Q ss_pred             CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHh
Q 019816            1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAA   80 (335)
Q Consensus         1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~   80 (335)
                      +||||+|+..|+.+++++|++++++++. +|..|+||||+|+..|+.+++++|+    ..+++++.+|.+|+||||+|+.
T Consensus        59 ~t~L~~A~~~g~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~g~~~iv~~Ll----~~g~~~~~~~~~g~t~L~~A~~  133 (351)
T 3utm_A           59 STPLHLAAGYNRVRIVQLLLQHGADVHA-KDKGGLVPLHNACSYGHYEVTELLL----KHGACVNAMDLWQFTPLHEAAS  133 (351)
T ss_dssp             CCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTCCCHHHHHHHTTCHHHHHHHH----HTTCCTTCCCTTCCCHHHHHHH
T ss_pred             CCHHHHHHHcCCHHHHHHHHHcCCCCCc-cCCCCCcHHHHHHHCCCHHHHHHHH----HCCCCCCCCCCCCCCHHHHHHH
Confidence            4788888888888888888888888755 6888888888888888888888888    4677888888888888888888


Q ss_pred             cCCCCc-ccccccCccccccccccccccc
Q 019816           81 VCPDPR-PYNAGYGIIPYKIAKGYYQAVN  108 (335)
Q Consensus        81 ~g~~~~-~lL~~~~~~~~~~~~~~~~~~n  108 (335)
                      .|+.++ ++|        +..|++++..|
T Consensus       134 ~~~~~~v~~L--------l~~g~~~~~~~  154 (351)
T 3utm_A          134 KNRVEVCSLL--------LSHGADPTLVN  154 (351)
T ss_dssp             TTCHHHHHHH--------HHTTCCTTCCC
T ss_pred             cCCHHHHHHH--------HHcCCCCcccc
Confidence            888887 666        55566555444

>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A

Probab=99.77  E-value=4.6e-19  Score=164.95  Aligned_cols=120  Identities=13%  Similarity=0.010  Sum_probs=108.9

Q ss_pred             chHhHHHhc-CCHHHHHHHhhhCCCcccccc--CCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHH
Q 019816            2 TALHLAAGQ-GNDWIVQEIIQRCPECCELVD--DRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVL   78 (335)
Q Consensus         2 TpLH~Aa~~-G~~e~v~~Ll~~~~~~~~~~d--~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~A   78 (335)
                      ||||.|+.. |+.++++.|++.+++++. .|  ..|+||||+|+..|+.+++++|+    ..++++|.+|.+|+||||+|
T Consensus       201 t~L~~Aa~~~g~~~~v~~LL~~Gadvn~-~~~~~~g~TpLh~Aa~~g~~~iv~~LL----~~Gadvn~~d~~G~TpLh~A  275 (368)
T 3jue_A          201 ALLFRASGHPPSLPTMADALAHGADVNW-VNGGQDNATPLIQATAANSLLACEFLL----QNGANVNQADSAGRGPLHHA  275 (368)
T ss_dssp             HHHHHHTSSSCCHHHHHHHHHTTCCTTC-CCTTTTCCCHHHHHHHTTCHHHHHHHH----HTTCCTTCCCTTSCCHHHHH
T ss_pred             cHHHHHHHccCCHHHHHHHHHcCCCCCc-cccccCCCCHHHHHHHCCCHHHHHHHH----HcCCCCCCCCCCCCCHHHHH
Confidence            689999999 999999999999999866 56  89999999999999999999999    57899999999999999999


Q ss_pred             HhcCCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhcCCchHHHHHHHHHHcC
Q 019816           79 AAVCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPELEKEIKELAKADG  137 (335)
Q Consensus        79 a~~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~~~  137 (335)
                      +..|+.++ ++|        +..|++++.+|.+|.||||+|+..+..   +++++|...+
T Consensus       276 ~~~g~~~~v~~L--------L~~Gad~~~~d~~G~TpL~~A~~~g~~---~iv~lLl~~~  324 (368)
T 3jue_A          276 TILGHTGLACLF--------LKRGADLGARDSEGRDPLTIAMETANA---DIVTLLRLAK  324 (368)
T ss_dssp             HHHTCHHHHHHH--------HHTTCCTTCCCTTSCCHHHHHHHTTCH---HHHHHHHHHH
T ss_pred             HHcCcHHHHHHH--------HHCcCCCCCcCCCCCCHHHHHHHCCCH---HHHHHHHHcC
Confidence            99999999 888        888999999999999999999988754   6666666543

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1

Probab=99.77  E-value=6.6e-19  Score=167.22  Aligned_cols=119  Identities=18%  Similarity=0.110  Sum_probs=108.8

Q ss_pred             CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHh
Q 019816            1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAA   80 (335)
Q Consensus         1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~   80 (335)
                      +||||+|++.|+.++++.|++++.+++. +|..|+||||+|+.+|+.+++++|+    ..|+++|.+|..|+||||+|+.
T Consensus       279 ~t~L~~A~~~~~~~~~~~Ll~~g~~~~~-~~~~g~t~L~~A~~~g~~~~v~~Ll----~~gad~n~~~~~g~t~L~~A~~  353 (437)
T 1n11_A          279 LTPLHLVAQEGHVPVADVLIKHGVMVDA-TTRMGYTPLHVASHYGNIKLVKFLL----QHQADVNAKTKLGYSPLHQAAQ  353 (437)
T ss_dssp             CCHHHHHHHHTCHHHHHHHHHHTCCTTC-CCSSCCCHHHHHHHSSCSHHHHHHH----HTTCCTTCCCTTSCCHHHHHHH
T ss_pred             CCHHHHHHHcCCHHHHHHHHhCCccCCC-CCCCCCCHHHHHHHcCcHHHHHHHH----hcCCCCCCCCCCCCCHHHHHHH
Confidence            5899999999999999999999998865 7999999999999999999999999    5789999999999999999999


Q ss_pred             cCCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhcCCchHHHHHHHHHH
Q 019816           81 VCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPELEKEIKELAKA  135 (335)
Q Consensus        81 ~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~  135 (335)
                      .|+.++ ++|        +..|++++.+|.+|+||+++|.+.+..   ++.++|+.
T Consensus       354 ~g~~~iv~~L--------l~~ga~~~~~~~~g~t~l~~A~~~g~~---~~~~~l~~  398 (437)
T 1n11_A          354 QGHTDIVTLL--------LKNGASPNEVSSDGTTPLAIAKRLGYI---SVTDVLKV  398 (437)
T ss_dssp             TTCHHHHHHH--------HHTTCCSCCCCSSSCCHHHHHHHTTCH---HHHHHHHH
T ss_pred             CChHHHHHHH--------HHCcCCCCCCCCCCCCHHHHHHHcCcH---HHHHHHHh
Confidence            999999 888        889999999999999999999988865   45555544

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1

Probab=99.77  E-value=1.1e-18  Score=155.11  Aligned_cols=123  Identities=18%  Similarity=0.086  Sum_probs=110.9

Q ss_pred             CchHhHHHhcCCHHHHHHHhhh-CCCccccccCCCCchHHHHHhcCC----HhHHHHHHhcCCcccccccccCCCCCchh
Q 019816            1 MTALHLAAGQGNDWIVQEIIQR-CPECCELVDDRGWNVLHFAMVSFD----KSDLKHLLNEYPVVKNLIFEKDVKGNTPF   75 (335)
Q Consensus         1 ~TpLH~Aa~~G~~e~v~~Ll~~-~~~~~~~~d~~G~t~Lh~A~~~g~----~~~v~~Ll~~~~~~~~~~n~~d~~G~TpL   75 (335)
                      +||||+|+..|+.+++++|++. +.++.. .|..|+||||+|+..++    .+++++|+    ..|.++|.+|.+|+|||
T Consensus       149 ~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~-~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll----~~g~~~~~~~~~g~t~L  223 (285)
T 1wdy_A          149 ATALMDAAEKGHVEVLKILLDEMGADVNA-CDNMGRNALIHALLSSDDSDVEAITHLLL----DHGADVNVRGERGKTPL  223 (285)
T ss_dssp             CCHHHHHHHHTCHHHHHHHHHTSCCCTTC-CCTTSCCHHHHHHHCSCTTTHHHHHHHHH----HTTCCSSCCCTTSCCHH
T ss_pred             CcHHHHHHHcCCHHHHHHHHHhcCCCCCc-cCCCCCCHHHHHHHccccchHHHHHHHHH----HcCCCCCCcCCCCCcHH
Confidence            4899999999999999999998 776644 79999999999999999    88999998    57899999999999999


Q ss_pred             HHHHhcCCCCc-ccccccCcccccc-cccccccccCCCCCHHHHHHhcCCchHHHHHHHHHHcCCC
Q 019816           76 HVLAAVCPDPR-PYNAGYGIIPYKI-AKGYYQAVNKQNISVEHINRYGFPELEKEIKELAKADGNG  139 (335)
Q Consensus        76 H~Aa~~g~~~~-~lL~~~~~~~~~~-~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~~~~~  139 (335)
                      |+|+..|+.++ ++|        +. .+++++.+|.+|+||+|+|+..+..   +++++|.+.|+.
T Consensus       224 ~~A~~~~~~~~v~~L--------l~~~g~~~~~~~~~g~t~l~~A~~~~~~---~i~~~Ll~~Ga~  278 (285)
T 1wdy_A          224 ILAVEKKHLGLVQRL--------LEQEHIEINDTDSDGKTALLLAVELKLK---KIAELLCKRGAS  278 (285)
T ss_dssp             HHHHHTTCHHHHHHH--------HHSSSCCTTCCCTTSCCHHHHHHHTTCH---HHHHHHHHHSSC
T ss_pred             HHHHHcCCHHHHHHH--------HhccCCCccccCCCCCcHHHHHHHcCcH---HHHHHHHHcCCC
Confidence            99999999998 776        55 8999999999999999999988754   889999888876

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}

Probab=99.77  E-value=1.2e-18  Score=156.51  Aligned_cols=122  Identities=14%  Similarity=-0.045  Sum_probs=107.7

Q ss_pred             CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHh
Q 019816            1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAA   80 (335)
Q Consensus         1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~   80 (335)
                      +||||+|+..|+.+++++|++.+++++. +|.+|+||||+|+..|+.+++++|+    ..+.+++.. .+|+||||+|+.
T Consensus        93 ~t~L~~A~~~g~~~~v~~Ll~~ga~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll----~~g~~~~~~-~~g~t~L~~A~~  166 (285)
T 3d9h_A           93 VSPLHEACLGGHLSCVKILLKHGAQVNG-VTADWHTPLFNACVSGSWDCVNLLL----QHGASVQPE-SDLASPIHEAAR  166 (285)
T ss_dssp             CCHHHHHHHTTCHHHHHHHHHTTCCSSC-CCTTCCCHHHHHHHHTCHHHHHHHH----HTTCCSSCS-CTTSCHHHHHHH
T ss_pred             CCHHHHHHHCCcHHHHHHHHHCCCCCCC-CCCCCCCHHHHHHHcCHHHHHHHHH----HCCCCCCCC-CCCCCHHHHHHH
Confidence            5999999999999999999999998865 7999999999999999999999999    456677654 459999999999


Q ss_pred             cCCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhcCCchHHHHHHHHHHcCCC
Q 019816           81 VCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPELEKEIKELAKADGNG  139 (335)
Q Consensus        81 ~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~~~~~  139 (335)
                      .|+.++ ++|        +..+++++.+|.+|.||||+|+..+..   +++++|.+.++.
T Consensus       167 ~g~~~~v~~L--------l~~g~~~~~~d~~g~t~L~~A~~~~~~---~~v~~Ll~~ga~  215 (285)
T 3d9h_A          167 RGHVECVNSL--------IAYGGNIDHKISHLGTPLYLACENQQR---ACVKKLLESGAD  215 (285)
T ss_dssp             HTCHHHHHHH--------HHTTCCTTCCBTTTBCHHHHHHHTTCH---HHHHHHHHTTCC
T ss_pred             cCCHHHHHHH--------HHCCCCCCCcCCCCCCHHHHHHHcCcH---HHHHHHHHCCCC
Confidence            999999 888        788999999999999999999988754   788888776554

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1

Probab=99.76  E-value=8.1e-19  Score=163.75  Aligned_cols=124  Identities=17%  Similarity=0.121  Sum_probs=109.8

Q ss_pred             CchHhHHHhcC---CHHHHHHHhhhCCCccc-------cccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCC
Q 019816            1 MTALHLAAGQG---NDWIVQEIIQRCPECCE-------LVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVK   70 (335)
Q Consensus         1 ~TpLH~Aa~~G---~~e~v~~Ll~~~~~~~~-------~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~   70 (335)
                      +||||+|+..|   +.+++++|++.+++++.       ..|..|+||||+|+..|+.+++++|++.   .+.++|.+|.+
T Consensus       236 ~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~---~~~~~n~~d~~  312 (373)
T 2fo1_E          236 MTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGE---KGSNKDKQDED  312 (373)
T ss_dssp             CCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHH---SCCCTTCCCTT
T ss_pred             CCHHHHHHHhCCcchHHHHHHHHHCCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHh---cCCCccCcCCC
Confidence            58999999998   89999999999988753       2577999999999999999999999932   34899999999


Q ss_pred             CCchhHHHHhcCCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhcCCchHHHHHHHHHHcCC
Q 019816           71 GNTPFHVLAAVCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPELEKEIKELAKADGN  138 (335)
Q Consensus        71 G~TpLH~Aa~~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~~~~  138 (335)
                      |+||||+|+..|+.++ ++|        +..|++++.+|..|+||+|+|+..+..   +++++|.+.++
T Consensus       313 g~TpL~~A~~~g~~~iv~~L--------l~~gad~~~~d~~g~t~l~~A~~~g~~---~iv~~Ll~~~a  370 (373)
T 2fo1_E          313 GKTPIMLAAQEGRIEVVMYL--------IQQGASVEAVDATDHTARQLAQANNHH---NIVDIFDRCRP  370 (373)
T ss_dssp             CCCHHHHHHHHTCHHHHHHH--------HHTTCCSSCCCSSSCCHHHHHHHTTCH---HHHHHHHTTC-
T ss_pred             CCCHHHHHHHcCCHHHHHHH--------HHcCCCccCCCCCCCCHHHHHHHcCCH---HHHHHHHhcCc
Confidence            9999999999999999 888        889999999999999999999988754   88888877654

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}

Probab=99.76  E-value=5.2e-19  Score=159.00  Aligned_cols=118  Identities=18%  Similarity=0.066  Sum_probs=99.9

Q ss_pred             CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCC-CchhHHHH
Q 019816            1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKG-NTPFHVLA   79 (335)
Q Consensus         1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G-~TpLH~Aa   79 (335)
                      +||||+|+..|+.+++++|++++++++. +|..|+||||+|+..|+.+++++|+    ..|++++.+|..| .||||+|+
T Consensus        63 ~t~L~~A~~~g~~~~v~~Ll~~ga~~~~-~d~~g~t~L~~A~~~g~~~~v~~Ll----~~ga~~~~~~~~g~~t~L~~A~  137 (285)
T 3kea_A           63 EFPLHQAATLEDTKIVKILLFSGLDDSQ-FDDKGNTALYYAVDSGNMQTVKLFV----KKNWRLMFYGKTGWKTSFYHAV  137 (285)
T ss_dssp             CCHHHHHTTSSSCHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHH----HHCGGGGGCSSSGGGSHHHHHH
T ss_pred             CCHHHHHHHcCCHHHHHHHHHCCCCCCC-cCCCCCcHHHHHHHcCCHHHHHHHH----hcCCCCCccCCCCCCCHHHHHH
Confidence            5899999999999999999999999865 7999999999999999999999999    5689999999999 79999999


Q ss_pred             hcCCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhcCCchHHHHHHHHHH
Q 019816           80 AVCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPELEKEIKELAKA  135 (335)
Q Consensus        80 ~~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~  135 (335)
                      ..|+.++ ++|        +..+.+.... +.|.||||+|+..+..   ++++.|.+
T Consensus       138 ~~~~~~~v~~L--------l~~g~~~~~~-~~g~t~L~~A~~~g~~---~~v~~Ll~  182 (285)
T 3kea_A          138 MLNDVSIVSYF--------LSEIPSTFDL-AILLSCIHITIKNGHV---DMMILLLD  182 (285)
T ss_dssp             HTTCHHHHHHH--------HTTSCTTCCC-STHHHHHHHHHHTTCH---HHHHHHHH
T ss_pred             HcCCHHHHHHH--------HhCCCccccc-cCCccHHHHHHHcChH---HHHHHHHH
Confidence            9999988 777        6666655222 2788999999977754   55665554

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1

Probab=99.76  E-value=7e-19  Score=158.30  Aligned_cols=117  Identities=19%  Similarity=0.121  Sum_probs=105.9

Q ss_pred             chHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHhc
Q 019816            2 TALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAAV   81 (335)
Q Consensus         2 TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~~   81 (335)
                      ||||.||..|+.++++.|++.+++++. .|.+|+||||+|+..|+.+++++|+    ..|+++|.+|.+|+||||+|+..
T Consensus        42 t~l~~A~~~g~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~g~~~~v~~Ll----~~ga~~~~~~~~g~tpL~~A~~~  116 (299)
T 1s70_B           42 AVFLAACSSGDTEEVLRLLERGADINY-ANVDGLTALHQACIDDNVDMVKFLV----ENGANINQPDNEGWIPLHAAASC  116 (299)
T ss_dssp             HHHHHHHHHTCHHHHHHHHHHCCCTTC-BCTTCCBHHHHHHHTTCHHHHHHHH----HTTCCTTCCCTTSCCHHHHHHHH
T ss_pred             cHHHHHHHcCCHHHHHHHHHcCCCCcc-cCCCCCCHHHHHHHcCCHHHHHHHH----HCCCCCCCCCCCCCcHHHHHHHc
Confidence            799999999999999999999999865 7999999999999999999999999    57899999999999999999999


Q ss_pred             CCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhcCCchHHHHHHHHH
Q 019816           82 CPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPELEKEIKELAK  134 (335)
Q Consensus        82 g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~  134 (335)
                      |+.++ ++|        +..|++++.+|.+|.||+|+|+..+   ..++++.+.
T Consensus       117 g~~~~v~~L--------l~~g~~~~~~~~~g~t~l~~A~~~~---~~~~~~~ll  159 (299)
T 1s70_B          117 GYLDIAEYL--------ISQGAHVGAVNSEGDTPLDIAEEEA---MEELLQNEV  159 (299)
T ss_dssp             TCHHHHHHH--------HHTTCCTTCCCTTSCCHHHHCCSHH---HHHHHHHHH
T ss_pred             CCHHHHHHH--------HhCCCCCCCcCCCCCCHHHHHHhcc---hHHHHHHHH
Confidence            99999 888        8889999999999999999998654   335555443

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1

Probab=99.75  E-value=7.8e-19  Score=163.85  Aligned_cols=126  Identities=13%  Similarity=0.048  Sum_probs=110.6

Q ss_pred             CchHhHHHhcCCHHHHHHHh--------hhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCC
Q 019816            1 MTALHLAAGQGNDWIVQEII--------QRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGN   72 (335)
Q Consensus         1 ~TpLH~Aa~~G~~e~v~~Ll--------~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~   72 (335)
                      +||||+||..|+.++++.|+        +.+.+++. +|.+|+||||+|+.+|+.+++++|+    ..|++++.+|.+|.
T Consensus       126 ~t~Lh~Aa~~g~~~~v~~Ll~~~~~~ll~~ga~vn~-~d~~g~TpL~~A~~~g~~~iv~~Ll----~~ga~~~~~~~~g~  200 (373)
T 2fo1_E          126 RTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNA-MDCDENTPLMLAVLARRRRLVAYLM----KAGADPTIYNKSER  200 (373)
T ss_dssp             CCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCCTTC-CCTTSCCHHHHHHHHTCHHHHHHHH----HTTCCSCCCCTTCC
T ss_pred             CCHHHHHHHCCCHHHHHHHHHHHHHHHHhcCCCCcC-CCCCCCCHHHHHHHcChHHHHHHHH----HCCCCCcccCCCCC
Confidence            59999999999998877776        77888865 7999999999999999999999999    57899999999999


Q ss_pred             chhHHHHhcCCCCc-ccccccCcccccccc---cccccccCCCCCHHHHHHhcCCchHHHHHHHHHHcCCC
Q 019816           73 TPFHVLAAVCPDPR-PYNAGYGIIPYKIAK---GYYQAVNKQNISVEHINRYGFPELEKEIKELAKADGNG  139 (335)
Q Consensus        73 TpLH~Aa~~g~~~~-~lL~~~~~~~~~~~~---~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~~~~~  139 (335)
                      ||||+|+..|+.++ ++|        +..+   .+++.+|.+|.||||+|+..+.....+++++|.+.++.
T Consensus       201 t~L~~A~~~g~~~~v~~L--------l~~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~  263 (373)
T 2fo1_E          201 SALHQAAANRDFGMMVYM--------LNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAK  263 (373)
T ss_dssp             CHHHHHHHTTCHHHHHHH--------TTSHHHHHTTSCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCC
T ss_pred             CHHHHHHHCCCHHHHHHH--------HhcCccccChhhcCCCCCCHHHHHHHhCCcchHHHHHHHHHCCCC
Confidence            99999999999998 777        6666   79999999999999999987654466888888876544

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}

Probab=99.75  E-value=2.2e-18  Score=157.86  Aligned_cols=123  Identities=19%  Similarity=0.097  Sum_probs=110.2

Q ss_pred             chHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHhc
Q 019816            2 TALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAAV   81 (335)
Q Consensus         2 TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~~   81 (335)
                      ||||.||+.|+.+.++.++...+.....+|..|+||||+|+..|+.+++++|+    ..|.++|.+|.+|+||||+|+..
T Consensus        26 ~~L~~A~~~g~~~~v~~ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll----~~g~~~~~~~~~g~t~L~~A~~~  101 (351)
T 3utm_A           26 DELLEAARSGNEEKLMALLTPLNVNCHASDGRKSTPLHLAAGYNRVRIVQLLL----QHGADVHAKDKGGLVPLHNACSY  101 (351)
T ss_dssp             HHHHHHHHHTCHHHHHHHCCTTTTTCCCSSTTCCCHHHHHHHTTCHHHHHHHH----HTTCCTTCCCTTCCCHHHHHHHT
T ss_pred             hhHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHH----HcCCCCCccCCCCCcHHHHHHHC
Confidence            79999999999999999988744444558999999999999999999999999    56899999999999999999999


Q ss_pred             CCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhcCCchHHHHHHHHHHcCCC
Q 019816           82 CPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPELEKEIKELAKADGNG  139 (335)
Q Consensus        82 g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~~~~~  139 (335)
                      |+.++ ++|        +..+++++.+|..|.||||+|+..+..   +++++|.+.++.
T Consensus       102 g~~~iv~~L--------l~~g~~~~~~~~~g~t~L~~A~~~~~~---~~v~~Ll~~g~~  149 (351)
T 3utm_A          102 GHYEVTELL--------LKHGACVNAMDLWQFTPLHEAASKNRV---EVCSLLLSHGAD  149 (351)
T ss_dssp             TCHHHHHHH--------HHTTCCTTCCCTTCCCHHHHHHHTTCH---HHHHHHHHTTCC
T ss_pred             CCHHHHHHH--------HHCCCCCCCCCCCCCCHHHHHHHcCCH---HHHHHHHHcCCC
Confidence            99999 888        888999999999999999999988754   788888886654

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}

Probab=99.75  E-value=7e-19  Score=148.36  Aligned_cols=124  Identities=15%  Similarity=-0.064  Sum_probs=103.9

Q ss_pred             CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCH----hHHHHHHhcCCcccccccccCCCCCchhH
Q 019816            1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDK----SDLKHLLNEYPVVKNLIFEKDVKGNTPFH   76 (335)
Q Consensus         1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~----~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH   76 (335)
                      .++||.|++.|+.+.++.++..+++.  ..|..|+||||+|+.+++.    +++++|+    ..|+++|.+|.+|+||||
T Consensus         7 ~~~l~~Aa~~g~~~~~~~l~~~~~~~--~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll----~~Gadvn~~d~~g~TpLh   80 (186)
T 3t8k_A            7 YRTVSAAAMLGTYEDFLELFEKGYED--KESVLKSNILYDVLRNNNDEARYKISMFLI----NKGADIKSRTKEGTTLFF   80 (186)
T ss_dssp             CSSHHHHHHHSCHHHHHHHHHHSSSC--HHHHHTTTHHHHHTTCSCHHHHHHHHHHHH----HTTCCSSCCCTTCCCTHH
T ss_pred             ccHHHHHHHcCCHHHHHHHHhcCccc--ccccCCCCHHHHHHHcCCcchHHHHHHHHH----HCCCCCCCCCCCCCcHHH
Confidence            37899999999999999999988644  2237899999999999975    4899999    579999999999999999


Q ss_pred             HHHhcCCCC------c-ccccccCcccccccccccccccCCCC-CHHHHHHhcCCc--hHHHHHHHHHH-cCC
Q 019816           77 VLAAVCPDP------R-PYNAGYGIIPYKIAKGYYQAVNKQNI-SVEHINRYGFPE--LEKEIKELAKA-DGN  138 (335)
Q Consensus        77 ~Aa~~g~~~------~-~lL~~~~~~~~~~~~~~~~~~n~~G~-Tpl~~a~~~~~~--~~~~i~~~l~~-~~~  138 (335)
                      +|+..++.+      + ++|        +..|++++.+|++|+ ||||+|+..+..  ...++++.|.+ .|+
T Consensus        81 ~a~~~~~~~~~~~~~iv~~L--------l~~Gadin~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~ga  145 (186)
T 3t8k_A           81 PLFQGGGNDITGTTELCKIF--------LEKGADITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGL  145 (186)
T ss_dssp             HHHHHCTTCHHHHHHHHHHH--------HHTTCCSSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTC
T ss_pred             HHHHcCCcchhhHHHHHHHH--------HHCCCCCCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCC
Confidence            999999753      3 677        789999999999999 999999985432  24568887776 553

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}

Probab=99.74  E-value=6e-18  Score=146.61  Aligned_cols=110  Identities=18%  Similarity=0.056  Sum_probs=84.2

Q ss_pred             CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHh
Q 019816            1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAA   80 (335)
Q Consensus         1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~   80 (335)
                      +||||+|+..|+.+++++|++.+++.....+..|+||||+|+..|+.++++.|+    ..+.+++.+|..|.||||+|+.
T Consensus        43 ~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll----~~g~~~~~~~~~g~t~l~~A~~  118 (240)
T 3eu9_A           43 VTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATRQGHLSMVVQLM----KYGADPSLIDGEGCSCIHLAAQ  118 (240)
T ss_dssp             CCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHHHHHHHHTCHHHHHHHH----HTTCCTTCCCTTSCCHHHHHHH
T ss_pred             CCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChhHHHHHcCCHHHHHHHH----HcCCCCcccCCCCCCHHHHHHH
Confidence            478888888888888888888887776656666888888888888888888887    4567777778888888888888


Q ss_pred             cCCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhcC
Q 019816           81 VCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGF  122 (335)
Q Consensus        81 ~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~  122 (335)
                      .|+.++ ++|        ...+.+++.+|..|.||+|+|+..+
T Consensus       119 ~~~~~~~~~L--------l~~~~~~~~~~~~g~t~l~~a~~~~  153 (240)
T 3eu9_A          119 FGHTSIVAYL--------IAKGQDVDMMDQNGMTPLMWAAYRT  153 (240)
T ss_dssp             TTCHHHHHHH--------HHTTCCTTCCCTTSCCHHHHHHHHC
T ss_pred             cCHHHHHHHH--------HhcCCCccccCCCCCcHHHHHHHhC
Confidence            777777 666        6667777777777777777777433

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}

Probab=99.74  E-value=3.6e-18  Score=148.04  Aligned_cols=121  Identities=18%  Similarity=0.088  Sum_probs=106.9

Q ss_pred             CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHh
Q 019816            1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAA   80 (335)
Q Consensus         1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~   80 (335)
                      +||||+|+..|+.++++.|++.++++.. +|..|+||||+|+..|+.++++.|+    ..+.+++.+|.+|+||||+|+.
T Consensus        77 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~l~~A~~~~~~~~~~~Ll----~~~~~~~~~~~~g~t~l~~a~~  151 (240)
T 3eu9_A           77 STPLHWATRQGHLSMVVQLMKYGADPSL-IDGEGCSCIHLAAQFGHTSIVAYLI----AKGQDVDMMDQNGMTPLMWAAY  151 (240)
T ss_dssp             BCHHHHHHHHTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHH----HTTCCTTCCCTTSCCHHHHHHH
T ss_pred             CChhHHHHHcCCHHHHHHHHHcCCCCcc-cCCCCCCHHHHHHHcCHHHHHHHHH----hcCCCccccCCCCCcHHHHHHH
Confidence            4899999999999999999999998855 7999999999999999999999999    4688999999999999999998


Q ss_pred             cCC-CCc-ccccccCcccccccccccccccC-CCCCHHHHHHhcCCchHHHHHHHHHHcC
Q 019816           81 VCP-DPR-PYNAGYGIIPYKIAKGYYQAVNK-QNISVEHINRYGFPELEKEIKELAKADG  137 (335)
Q Consensus        81 ~g~-~~~-~lL~~~~~~~~~~~~~~~~~~n~-~G~Tpl~~a~~~~~~~~~~i~~~l~~~~  137 (335)
                      .++ ..+ ++|        ...+.+++..+. .|.||||+|+..+..   +++++|.+.+
T Consensus       152 ~~~~~~~~~~L--------~~~~~~~~~~~~~~g~t~L~~A~~~~~~---~~v~~Ll~~g  200 (240)
T 3eu9_A          152 RTHSVDPTRLL--------LTFNVSVNLGDKYHKNTALHWAVLAGNT---TVISLLLEAG  200 (240)
T ss_dssp             HCCSSTTHHHH--------HHTTCCTTCCCTTTCCCHHHHHHHHTCH---HHHHHHHHHT
T ss_pred             hCChHHHHHHH--------HhcCCCcchhhccCCCcHHHHHHHcCCH---HHHHHHHHcC
Confidence            777 455 888        888999999997 999999999987754   6777776644

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A

Probab=99.74  E-value=8.7e-19  Score=143.03  Aligned_cols=104  Identities=14%  Similarity=0.071  Sum_probs=81.5

Q ss_pred             CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCc-hHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHH
Q 019816            1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWN-VLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLA   79 (335)
Q Consensus         1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t-~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa   79 (335)
                      +||||+|+ .|+.+++++|++.+++++. +|..|+| |||+|+..|+.+++++|+    ..|++++.+|.+|+||||+|+
T Consensus        46 ~t~L~~A~-~~~~~~v~~Ll~~g~~~~~-~d~~g~ttpL~~A~~~~~~~~v~~Ll----~~ga~~~~~d~~g~tpl~~A~  119 (156)
T 1bi7_B           46 RRPIQVMM-MGSARVAELLLLHGAEPNC-ADPATLTRPVHDAAREGFLDTLVVLH----RAGARLDVRDAWGRLPVDLAE  119 (156)
T ss_dssp             CCTTTSSC-TTCHHHHHHHHTTTCCCCC-CCTTTCCCHHHHHHHHTCHHHHHHHH----HHTCCSSCCCTTCCCHHHHHH
T ss_pred             CCHHHHHH-cCCHHHHHHHHHcCCCCCC-cCCCCCcHHHHHHHHCCCHHHHHHHH----HcCCCCcccCCCCCCHHHHHH
Confidence            58999985 9999999999999998865 7999999 999999999999999999    578999999999999999999


Q ss_pred             hcCCCCc-ccccccCcccccccccccccccCCCCCHHHHH
Q 019816           80 AVCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHIN  118 (335)
Q Consensus        80 ~~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a  118 (335)
                      ..|+.++ ++|        +..|++++.+|..|.||.+-+
T Consensus       120 ~~~~~~~v~~L--------l~~ga~~~~~~~~g~t~~~~~  151 (156)
T 1bi7_B          120 ELGHRDVARYL--------RAAAGGTRGSNHARIDAAEGP  151 (156)
T ss_dssp             HHTCHHHHHHH--------SSCC-----------------
T ss_pred             HhCHHHHHHHH--------HHcCCCCCccCcCcCcccccC
Confidence            9999999 888        899999999999999997743

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}

Probab=99.73  E-value=2.4e-18  Score=159.53  Aligned_cols=123  Identities=16%  Similarity=0.012  Sum_probs=99.8

Q ss_pred             chHhHHHhcCCHHHHHHHhhh----CCCccc----------------cccCCCCchHHHHHhcC--CHhHHHHHHhcCCc
Q 019816            2 TALHLAAGQGNDWIVQEIIQR----CPECCE----------------LVDDRGWNVLHFAMVSF--DKSDLKHLLNEYPV   59 (335)
Q Consensus         2 TpLH~Aa~~G~~e~v~~Ll~~----~~~~~~----------------~~d~~G~t~Lh~A~~~g--~~~~v~~Ll~~~~~   59 (335)
                      ||||+|+..|+.++++.|++.    +.++..                ..|..|+||||+|+..|  +.+++++|+    .
T Consensus        86 t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll----~  161 (364)
T 3ljn_A           86 KPIHLAVMANKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILV----Q  161 (364)
T ss_dssp             CHHHHHHHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHH----H
T ss_pred             CHHHHHHHcCCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHH----H
Confidence            566666666666666666665    433321                16788999999999999  999999999    5


Q ss_pred             ccccccccCCCCCchhHHHHhcCCCCc-ccccccCcccccccccc-----cccccCCCCCHHHHHHhcCCchHHHHHHHH
Q 019816           60 VKNLIFEKDVKGNTPFHVLAAVCPDPR-PYNAGYGIIPYKIAKGY-----YQAVNKQNISVEHINRYGFPELEKEIKELA  133 (335)
Q Consensus        60 ~~~~~n~~d~~G~TpLH~Aa~~g~~~~-~lL~~~~~~~~~~~~~~-----~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l  133 (335)
                      .|++++.+|.+|+||||+|+..|+.++ ++|        +..+++     ++.+|..|.||||+|+..+..   +++++|
T Consensus       162 ~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~L--------l~~g~~~~~~~~~~~~~~g~t~L~~A~~~g~~---~~v~~L  230 (364)
T 3ljn_A          162 LGASPTAKDKADETPLMRAMEFRNREALDLM--------MDTVPSKSSLRLDYANKQGNSHLHWAILINWE---DVAMRF  230 (364)
T ss_dssp             HTCCTTCCCTTSCCHHHHHHHTTCHHHHHHH--------HHHCSCSSSCCTTCCCTTCCCTTHHHHTTTCH---HHHHHH
T ss_pred             cCCCCcccCCCCCCHHHHHHHcCCHHHHHHH--------HhcccccccccccccCCCCCcHHHHHHHcCCH---HHHHHH
Confidence            689999999999999999999999999 888        777777     999999999999999988754   788888


Q ss_pred             HHcCCC
Q 019816          134 KADGNG  139 (335)
Q Consensus       134 ~~~~~~  139 (335)
                      .+.|+.
T Consensus       231 l~~gad  236 (364)
T 3ljn_A          231 VEMGID  236 (364)
T ss_dssp             HTTTCC
T ss_pred             HHcCCC
Confidence            876543

>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*

Probab=99.73  E-value=6.2e-18  Score=155.10  Aligned_cols=124  Identities=18%  Similarity=0.093  Sum_probs=105.9

Q ss_pred             CchHhHHHhcCCHHHHHHHhhh-CCCccccccCCCCchHHHHHhcCC----HhHHHHHHhcCCcccccccccCCCCCchh
Q 019816            1 MTALHLAAGQGNDWIVQEIIQR-CPECCELVDDRGWNVLHFAMVSFD----KSDLKHLLNEYPVVKNLIFEKDVKGNTPF   75 (335)
Q Consensus         1 ~TpLH~Aa~~G~~e~v~~Ll~~-~~~~~~~~d~~G~t~Lh~A~~~g~----~~~v~~Ll~~~~~~~~~~n~~d~~G~TpL   75 (335)
                      +||||+|++.|+.+++++||++ +.+++. +|..|+|++|+++..++    ..++++|+    ..|+++|.+|.+|+|||
T Consensus       169 ~T~L~~A~~~g~~~~v~~LL~~~gad~n~-~d~~g~t~l~~~~~~~~~~~~~~i~~lLl----~~gad~n~~d~~g~t~L  243 (337)
T 4g8k_A          169 ATALMDAAEKGHVEVLKILLDEMGADVNA-CDNMGRNALIHALLSSDDSDVEAITHLLL----DHGADVNVRGERGKTPL  243 (337)
T ss_dssp             CCHHHHHHHHTCHHHHHHHHHHSCCCTTC-CCTTSCCHHHHHHHHSCTTTHHHHHHHHH----HTTCCTTCCCGGGCCHH
T ss_pred             CcHHHHHHHCCCHHHHHHHHhccCCCcCc-cCCCCCcHHHHHHHHcCcccHHHHHHHHH----HCCCCCCCcCCCCCCHH
Confidence            4899999999999999999975 677754 79999999999876554    34677788    57899999999999999


Q ss_pred             HHHHhcCCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhcCCchHHHHHHHHHHcCCC
Q 019816           76 HVLAAVCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPELEKEIKELAKADGNG  139 (335)
Q Consensus        76 H~Aa~~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~~~~~  139 (335)
                      |+|+..|+.+. ++|.       ...+++++.+|.+|+||||+|+..+..   +++++|.++|+.
T Consensus       244 ~~a~~~~~~~~v~~Ll-------~~~~~~vn~~d~~G~TpL~~A~~~g~~---~iv~~Ll~~GAd  298 (337)
T 4g8k_A          244 ILAVEKKHLGLVQRLL-------EQEHIEINDTDSDGKTALLLAVELKLK---KIAELLCKRGAS  298 (337)
T ss_dssp             HHHHHTTCHHHHHHHH-------TSTTCCTTCBCTTSCBHHHHHHHTTCH---HHHHHHHTTSCS
T ss_pred             HHHHHhhhhHHHHHHH-------HhcCCcccCcCCCCCCHHHHHHHcCCH---HHHHHHHHCCCC
Confidence            99999999988 5540       456899999999999999999988854   888988887764

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1

Probab=99.73  E-value=3.2e-18  Score=127.19  Aligned_cols=91  Identities=23%  Similarity=0.133  Sum_probs=81.7

Q ss_pred             CCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHhcCCCCc-ccccccCcccccccccccccccCCC
Q 019816           33 RGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAAVCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQN  111 (335)
Q Consensus        33 ~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G  111 (335)
                      +|+||||+|+..|+.+++++|+    ..+.++|.+|.+|+||||+|+..|+.++ ++|        +..|++++.+|.+|
T Consensus         1 ~g~t~L~~A~~~~~~~~v~~Ll----~~g~~~n~~d~~g~t~L~~A~~~~~~~~v~~L--------l~~ga~~~~~d~~g   68 (93)
T 1n0q_A            1 NGRTPLHLAARNGHLEVVKLLL----EAGADVNAKDKNGRTPLHLAARNGHLEVVKLL--------LEAGADVNAKDKNG   68 (93)
T ss_dssp             --CCHHHHHHHHTCHHHHHHHH----HTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHH--------HHTTCCTTCCCTTS
T ss_pred             CCCcHHHHHHHcCCHHHHHHHH----HcCCCCcccCCCCCCHHHHHHHcCCHHHHHHH--------HHcCCCCCccCCCC
Confidence            5899999999999999999999    5788999999999999999999999999 888        88899999999999


Q ss_pred             CCHHHHHHhcCCchHHHHHHHHHHcCC
Q 019816          112 ISVEHINRYGFPELEKEIKELAKADGN  138 (335)
Q Consensus       112 ~Tpl~~a~~~~~~~~~~i~~~l~~~~~  138 (335)
                      +||+|+|+..+..   +++++|.+.|+
T Consensus        69 ~t~l~~A~~~~~~---~~~~~Ll~~ga   92 (93)
T 1n0q_A           69 RTPLHLAARNGHL---EVVKLLLEAGA   92 (93)
T ss_dssp             CCHHHHHHHTTCH---HHHHHHHHTTC
T ss_pred             CCHHHHHHHcCCH---HHHHHHHHcCC
Confidence            9999999988754   78888877664

>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1

Probab=99.72  E-value=1.3e-18  Score=159.57  Aligned_cols=113  Identities=15%  Similarity=0.048  Sum_probs=94.8

Q ss_pred             CchHhHHHhcCC---HHHHHHHhhhCCCccccccCCCCchHHHHHh----cCCHhHHHHHHhcCCcc-------------
Q 019816            1 MTALHLAAGQGN---DWIVQEIIQRCPECCELVDDRGWNVLHFAMV----SFDKSDLKHLLNEYPVV-------------   60 (335)
Q Consensus         1 ~TpLH~Aa~~G~---~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~----~g~~~~v~~Ll~~~~~~-------------   60 (335)
                      +||||+|+..|+   .++++.|++.+......+|..|+||||+|+.    .|+.++++.|++.....             
T Consensus       165 ~TpLh~A~~~g~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~  244 (327)
T 1sw6_A          165 ESCLVKAVKSVNNYDSGTFEALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGT  244 (327)
T ss_dssp             CCHHHHHHHSSHHHHTTCHHHHHHHHGGGGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC-
T ss_pred             CCHHHHHHHhcccccHHHHHHHHHhhhccccCCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhh
Confidence            599999999999   6788888887633335589999999999999    89999999998421000             


Q ss_pred             ---c-------------------------ccccccCCCCCchhHHHHhcCCCCc-ccccccCcccccccccccccccCCC
Q 019816           61 ---K-------------------------NLIFEKDVKGNTPFHVLAAVCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQN  111 (335)
Q Consensus        61 ---~-------------------------~~~n~~d~~G~TpLH~Aa~~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G  111 (335)
                         +                         .++|.+|.+|+||||+|+..|+.++ ++|        +..|++++.+|.+|
T Consensus       245 ~~~g~~~~~~~~~g~t~L~~a~~~~~Ll~~~~n~~d~~G~TpLh~A~~~g~~~~v~~L--------l~~Gad~~~~d~~G  316 (327)
T 1sw6_A          245 NEKESKPNDKNGERKDSILENLDLKWIIANMLNAQDSNGDTCLNIAARLGNISIVDAL--------LDYGADPFIANKSG  316 (327)
T ss_dssp             ---------------CHHHHHCSHHHHHHHTTTCCCTTSCCHHHHHHHHCCHHHHHHH--------HHTTCCTTCCCTTS
T ss_pred             hcccCCcccccccCCChhHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHcCCHHHHHHH--------HHcCCCCcccCCCC
Confidence               0                         0588999999999999999999999 888        88999999999999


Q ss_pred             CCHHHHHHhc
Q 019816          112 ISVEHINRYG  121 (335)
Q Consensus       112 ~Tpl~~a~~~  121 (335)
                      +||||+|++.
T Consensus       317 ~TpL~~A~~~  326 (327)
T 1sw6_A          317 LRPVDFGAGL  326 (327)
T ss_dssp             CCGGGGTCC-
T ss_pred             CCHHHHHHhc
Confidence            9999999864

>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*

Probab=99.71  E-value=2.4e-17  Score=151.13  Aligned_cols=123  Identities=14%  Similarity=0.026  Sum_probs=109.3

Q ss_pred             CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHh
Q 019816            1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAA   80 (335)
Q Consensus         1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~   80 (335)
                      +||||.|+++|+.++|+.||++|++++...+..|+||||+|+.+|+.+++++|+    ..|++++.+|..+.+|+|.++.
T Consensus        26 ~t~L~~Av~~g~~~~V~~LL~~Gadvn~~~~~~g~TpLh~A~~~g~~~iv~~Ll----~~ga~~~~~~~~~~~~~~~~~~  101 (337)
T 4g8k_A           26 NHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLL----RHGADPVLRKKNGATPFILAAI  101 (337)
T ss_dssp             HHHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHH----HTTCCTTCCCTTCCCHHHHHHH
T ss_pred             ChHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCcCHHHHHHHcCCHHHHHHHH----HcCCchhhhccCCCchhHHHHh
Confidence            379999999999999999999999997644556999999999999999999999    5789999999999999999999


Q ss_pred             cCCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhcCCchHHHHHHHHHHcCC
Q 019816           81 VCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPELEKEIKELAKADGN  138 (335)
Q Consensus        81 ~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~~~~  138 (335)
                      .+.... ..+        ...+.+++.+|..|.||+++|+..+..   ++++.+.+.++
T Consensus       102 ~~~~~~~~~~--------~~~~~~~~~~d~~g~t~l~~A~~~~~~---~~~~~ll~~ga  149 (337)
T 4g8k_A          102 AGSVKLLKLF--------LSKGADVNECDFYGFTAFMEAAVYGKV---KALKFLYKRGA  149 (337)
T ss_dssp             HTCHHHHHHH--------HTTTCCTTCBCTTCCBHHHHHHHTTCH---HHHHHHHHTTC
T ss_pred             cccchhhHHh--------hhccchhhhhccCCCCHHHHHHHcCcH---HHHHHHHHcCC
Confidence            988887 666        778899999999999999999988754   67777776554

>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}

Probab=99.71  E-value=3.5e-18  Score=154.93  Aligned_cols=105  Identities=20%  Similarity=0.084  Sum_probs=89.1

Q ss_pred             CchHhHHHhc---CCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHH
Q 019816            1 MTALHLAAGQ---GNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHV   77 (335)
Q Consensus         1 ~TpLH~Aa~~---G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~   77 (335)
                      +||||+|+..   |+.+++++|++.+++++. +|.+|+||||+|+..|+.+++++|+    ..|++++.+|.+|+||||+
T Consensus       191 ~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~-~d~~G~TpLh~A~~~g~~~~v~~Ll----~~gad~~~~d~~G~TpL~~  265 (301)
T 2b0o_E          191 ELVLHLAVKVANQASLPLVDFIIQNGGHLDA-KAADGNTALHYAALYNQPDCLKLLL----KGRALVGTVNEAGETALDI  265 (301)
T ss_dssp             ECHHHHHHHTCCTTTHHHHHHHHHHSSCTTC-CCTTCCCHHHHHHHTTCHHHHHHHH----HTTCCCSCCCTTSCCHHHH
T ss_pred             ccHHHHHHHhcccCcHHHHHHHHhcCCCCCC-CCCCCCCHHHHHHHcCCHHHHHHHH----HcCCCCCCcCCCCCCHHHH
Confidence            4899999997   899999999999999865 7999999999999999999999999    5789999999999999999


Q ss_pred             HHhcCCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhcCCc
Q 019816           78 LAAVCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPE  124 (335)
Q Consensus        78 Aa~~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~~  124 (335)
                      |+..|+.++ ++|        +..+++      .|.||||+|+.++.+
T Consensus       266 A~~~~~~~iv~~L--------l~~ga~------~g~tpLh~A~~~g~~  299 (301)
T 2b0o_E          266 ARKKHHKECEELL--------EQAQAG------TFAFPLHVDYSWVIS  299 (301)
T ss_dssp             HHHHTCHHHHHHH--------HHHHHH------TTSSCCC--------
T ss_pred             HHHcCCHHHHHHH--------HHhcCC------CCCChhHHHHhcCCc
Confidence            999999999 888        666654      689999999987643

>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}

Probab=99.67  E-value=2.3e-17  Score=147.55  Aligned_cols=136  Identities=10%  Similarity=-0.004  Sum_probs=110.9

Q ss_pred             CchHhHHHhcCCHHHHHHHhhhCCC-ccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccc-cccccCCCCCchhHHH
Q 019816            1 MTALHLAAGQGNDWIVQEIIQRCPE-CCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKN-LIFEKDVKGNTPFHVL   78 (335)
Q Consensus         1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~-~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~-~~n~~d~~G~TpLH~A   78 (335)
                      ++++|.|+..|+.+.++.+++...+ ..+.+|.+|+||||+|+..|+.++++.|+    ..+. +++.+|.+|.||||+|
T Consensus        77 ~~~l~~a~~~~~~~~~~~l~~~~~~~~~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll----~~g~~~~~~~~~~g~tpL~~a  152 (276)
T 4hbd_A           77 RSDAHPELVRRHLVTFRAMSARLLDYVVNIADSNGNTALHYSVSHANFPVVQQLL----DSGVCKVDKQNRAGYSPIMLT  152 (276)
T ss_dssp             STTCCHHHHHHHHHHHHHHCHHHHHHHHTCCCTTSCCHHHHHHHTTCHHHHHHHH----HTSCCCTTCCCTTSCCHHHHG
T ss_pred             ccCCCHHHHHHHHHHHHHHHHHHHhhcCcCCCCCCCCHHHHHHHCCCHHHHHHHH----HCCCCcCCCCCCCCCCHHHHH
Confidence            4789999999999999999887655 13447999999999999999999999999    4565 9999999999999999


Q ss_pred             Hhc-----CCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhcCCchHHHHHHHHHHcC--------CCCCCcc
Q 019816           79 AAV-----CPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPELEKEIKELAKADG--------NGQYPDG  144 (335)
Q Consensus        79 a~~-----g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~~~--------~~~~p~~  144 (335)
                      +..     ++.++ ++|        ...+.+.+..|..|+||||+|+..+..   ++++.|.+.|        .|.+|++
T Consensus       153 ~~~~~~~~~~~~~v~~L--------l~~g~~~~~~~~~g~tpLh~A~~~g~~---~~v~~Ll~~gad~n~~d~~G~TpLh  221 (276)
T 4hbd_A          153 ALATLKTQDDIETVLQL--------FRLGNINAKASQAGQTALMLAVSHGRV---DVVKALLACEADVNVQDDDGSTALM  221 (276)
T ss_dssp             GGCCCCSHHHHHHHHHH--------HHHSCTTCCCTTTCCCHHHHHHHTTCH---HHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred             HHHHhhhhhhHHHHHHH--------HHcCCCccccCCCCCCHHHHHHHcCCH---HHHHHHHhCCCCCCCCCCCCCCHHH
Confidence            954     44444 666        677888899999999999999988754   7788777743        4567888


Q ss_pred             hhhhhhh
Q 019816          145 VIKMNKE  151 (335)
Q Consensus       145 ~~~~~~~  151 (335)
                      .......
T Consensus       222 ~A~~~g~  228 (276)
T 4hbd_A          222 CACEHGH  228 (276)
T ss_dssp             HHHHHTC
T ss_pred             HHHHCCC
Confidence            7655443

>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}

Probab=99.67  E-value=8e-18  Score=146.51  Aligned_cols=106  Identities=23%  Similarity=0.159  Sum_probs=91.0

Q ss_pred             CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccC-CCCCchhHHH-
Q 019816            1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKD-VKGNTPFHVL-   78 (335)
Q Consensus         1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d-~~G~TpLH~A-   78 (335)
                      +||||+||..|+.+++++|++.+++++. +|..|+||||+|+..|+.+++++|+    ..|++++.+| .+|+||||+| 
T Consensus        55 ~tpLh~A~~~g~~~~v~~Ll~~ga~~n~-~d~~g~tpLh~A~~~g~~~~v~~Ll----~~ga~~~~~~~~~g~tpL~~A~  129 (229)
T 2vge_A           55 ITALHNAICGANYSIVDFLITAGANVNS-PDSHGWTPLHCAASCNDTVICMALV----QHGAAIFATTLSDGATAFEKCD  129 (229)
T ss_dssp             CCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTCCCHHHHHHHTTCHHHHHHHH----TTTCCTTCCCSSTTCCTGGGCC
T ss_pred             CCHHHHHHHcCCHHHHHHHHHCCCCCCC-CCCCCCCHHHHHHHcCCHHHHHHHH----HcCCCcccccCCCCCCHHHHHH
Confidence            5999999999999999999999999865 7999999999999999999999999    5789999987 6999999999 


Q ss_pred             -HhcCCCCc-ccccccCcccccccccccccccCCCCCHHHHHH
Q 019816           79 -AAVCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINR  119 (335)
Q Consensus        79 -a~~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~  119 (335)
                       +..|+.++ ++|        +..|++++.+|..|.||++.+.
T Consensus       130 a~~~~~~~~v~~L--------l~~ga~~~~~~~~~~~~l~~~~  164 (229)
T 2vge_A          130 PYREGYADCATYL--------ADVEQSMGLMNSGAVYALWDYS  164 (229)
T ss_dssp             TTSTTHHHHHHHH--------HHHHHHTTTSGGGEEEESSCBC
T ss_pred             HHhcChHHHHHHH--------HHcCCCcccccCCchHHHHHHh
Confidence             88888888 777        5666666666666666665433

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A

Probab=99.66  E-value=1.9e-16  Score=132.64  Aligned_cols=104  Identities=17%  Similarity=0.118  Sum_probs=89.8

Q ss_pred             CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHh
Q 019816            1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAA   80 (335)
Q Consensus         1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~   80 (335)
                      +||||+|+..|+.+++++|++++++++...+..|+||||+|+..|+.+++++|+    ..|++++.+|.+|+||||+|++
T Consensus        77 ~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll----~~ga~~~~~d~~g~tpl~~A~~  152 (183)
T 3deo_A           77 RTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEALV----ELGADIEVEDERGLTALELARE  152 (183)
T ss_dssp             CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSSCCHHHHHHHTTCHHHHHHHH----HHTCCTTCCCTTSCCHHHHHHH
T ss_pred             CCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHhcCcHHHHHHHH----HcCCCCcCCCCCCCCHHHHHHH
Confidence            599999999999999999999999997643489999999999999999999999    5789999999999999999998


Q ss_pred             cCCCCcccccccCcccccccccccccccCCCCCHHHHHHhcCCchHHHHHHHHHH
Q 019816           81 VCPDPRPYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPELEKEIKELAKA  135 (335)
Q Consensus        81 ~g~~~~~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~  135 (335)
                      .++.                        ..+.+|+++++..+   ..+++++|.+
T Consensus       153 ~~~~------------------------~~~~~~l~~a~~~~---~~~i~~~L~~  180 (183)
T 3deo_A          153 ILKT------------------------TPKGNPMQFGRRIG---LEKVINVLEG  180 (183)
T ss_dssp             HHHT------------------------CCCCSHHHHHHHHH---HHHHHHHHHT
T ss_pred             hccC------------------------cccccHHHHHHHcC---HHHHHHHHHH
Confidence            5433                        23578999999776   4577777764

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1

Probab=99.66  E-value=1.1e-16  Score=127.45  Aligned_cols=95  Identities=23%  Similarity=0.107  Sum_probs=85.6

Q ss_pred             cccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHhcCCCCc-ccccccCcccccccccccccc
Q 019816           29 LVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAAVCPDPR-PYNAGYGIIPYKIAKGYYQAV  107 (335)
Q Consensus        29 ~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~~g~~~~-~lL~~~~~~~~~~~~~~~~~~  107 (335)
                      .+|.+|+||||+|+..|+.++++.|+    ..+.+++.+|.+|+||||+|+..|+.++ ++|        +..+++++.+
T Consensus         5 ~~~~~g~t~L~~A~~~~~~~~~~~Ll----~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~L--------l~~g~~~~~~   72 (137)
T 3c5r_A            5 FTNHRGETLLHIASIKGDIPSVEYLL----QNGSDPNVKDHAGWTPLHEACNHGHLKVVELL--------LQHKALVNTT   72 (137)
T ss_dssp             CCCTTCCCHHHHHHHHTCHHHHHHHH----HTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHH--------HHTTCCTTCC
T ss_pred             CcCCCCCCHHHHHHHcCCHHHHHHHH----HcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHH--------HHcCCcccCc
Confidence            36999999999999999999999999    4688999999999999999999999999 888        7889999999


Q ss_pred             cCCCCCHHHHHHhcCCchHHHHHHHHHHcCC
Q 019816          108 NKQNISVEHINRYGFPELEKEIKELAKADGN  138 (335)
Q Consensus       108 n~~G~Tpl~~a~~~~~~~~~~i~~~l~~~~~  138 (335)
                      |..|+||||+|+..+..   +++++|.+.++
T Consensus        73 ~~~g~t~L~~A~~~~~~---~~v~~Ll~~ga  100 (137)
T 3c5r_A           73 GYQNDSPLHDAAKNGHV---DIVKLLLSYGA  100 (137)
T ss_dssp             CGGGCCHHHHHHHTTCH---HHHHHHHHTTC
T ss_pred             CCCCCCHHHHHHHcCCH---HHHHHHHHcCC
Confidence            99999999999988754   77887777544

>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A

Probab=99.65  E-value=9.2e-17  Score=123.24  Aligned_cols=84  Identities=21%  Similarity=0.151  Sum_probs=74.4

Q ss_pred             CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHh
Q 019816            1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAA   80 (335)
Q Consensus         1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~   80 (335)
                      +||||+|+..|+.+++++|++.+++++. +|..|+||||+|+..|+.+++++|+    ..|++++.+|.+|+||||+|+.
T Consensus        25 ~t~L~~A~~~g~~~~v~~Ll~~g~~i~~-~d~~g~tpLh~A~~~~~~~~v~~Ll----~~ga~~~~~d~~g~tpl~~A~~   99 (110)
T 2zgd_A           25 GKKLLEAARAGQDDEVRILMANGADVAA-KDKNGSTPLHLAARNGHLEVVKLLL----EAGADVXAQDKFGKTAFDISID   99 (110)
T ss_dssp             HHHHHHHHHHTCHHHHHHHHHTTCCTTC-CCTTCCCHHHHHHHTTCHHHHHHHH----HTTCCTTCCCTTSCCHHHHHHH
T ss_pred             chHHHHHHHcCCHHHHHHHHHcCCCCCc-cCCCCCCHHHHHHHcCCHHHHHHHH----HcCCCccccccCCCcHHHHHHH
Confidence            3789999999999999999999988865 7899999999999999999999999    4688999999999999999999


Q ss_pred             cCCCCc-ccc
Q 019816           81 VCPDPR-PYN   89 (335)
Q Consensus        81 ~g~~~~-~lL   89 (335)
                      .|+.++ ++|
T Consensus       100 ~~~~~~~~~L  109 (110)
T 2zgd_A          100 NGNEDLAEIL  109 (110)
T ss_dssp             HTCHHHHHHH
T ss_pred             cCCHHHHHHh
Confidence            988776 544

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1

Probab=99.65  E-value=3.7e-17  Score=130.13  Aligned_cols=83  Identities=13%  Similarity=-0.027  Sum_probs=77.9

Q ss_pred             CchHhHHHhcCCHHHHHHHhhhCCCccccccCC-CCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHH
Q 019816            1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDR-GWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLA   79 (335)
Q Consensus         1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~-G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa   79 (335)
                      +||||+|+. |+.+++++|++++++++. +|.. |+||||+|+..|+.+++++|+    ..+++++.+|.+|+||||+|+
T Consensus        46 ~t~L~~A~~-~~~~~v~~Ll~~g~~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll----~~ga~~~~~d~~g~tpl~~A~  119 (136)
T 1d9s_A           46 RRPIQVMMM-GSAQVAELLLLHGAEPNC-ADPATLTRPVHDAAREGFLDTLVVLH----RAGARLDVCDAWGRLPVDLAE  119 (136)
T ss_dssp             CTTTTTSTT-SCHHHHHHHHHHTCCSSC-CBTTTTBCHHHHHHHHTCHHHHHHHH----HTCCCCCCCSSSSSCHHHHHH
T ss_pred             CCHHHHHHc-CCHHHHHHHHHCCCCCCC-cCCCCCCCHHHHHHHcCCHHHHHHHH----HcCCCCCccCCCCCCHHHHHH
Confidence            589999999 999999999999999866 7888 999999999999999999999    578999999999999999999


Q ss_pred             hcCCCCc-ccc
Q 019816           80 AVCPDPR-PYN   89 (335)
Q Consensus        80 ~~g~~~~-~lL   89 (335)
                      ..++.++ ++|
T Consensus       120 ~~~~~~~~~~L  130 (136)
T 1d9s_A          120 EQGHRDIARYL  130 (136)
T ss_dssp             HHTCHHHHHHH
T ss_pred             HcCCHHHHHHH
Confidence            9999988 777

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C

Probab=99.65  E-value=1.4e-16  Score=126.78  Aligned_cols=84  Identities=23%  Similarity=0.209  Sum_probs=78.4

Q ss_pred             CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHh
Q 019816            1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAA   80 (335)
Q Consensus         1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~   80 (335)
                      +||||+|+..|+.++++.|++.+++++. +|..|+||||+|+..|+.+++++|+    ..+++++.+|.+|+||||+|+.
T Consensus        48 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~d~~g~t~L~~A~~~~~~~~v~~Ll----~~g~~~~~~~~~g~tpl~~A~~  122 (136)
T 2jab_A           48 LTPLYLATAHGHLEIVEVLLKNGADVNA-VDAIGFTPLHLAAFIGHLEIAEVLL----KHGADVNAQDKFGKTAFDISIG  122 (136)
T ss_dssp             CCHHHHHHHHTCHHHHHHHHHTTCCTTC-CCTTCCCHHHHHHHHTCHHHHHHHH----HTTCCTTCCCTTSCCHHHHHHH
T ss_pred             CCHHHHHHHcCCHHHHHHHHHcCCCCCc-CCCCCCCHHHHHHHcCCHHHHHHHH----HcCCCCcCcCCCCCCHHHHHHH
Confidence            5899999999999999999999999865 7999999999999999999999999    5688999999999999999999


Q ss_pred             cCCCCc-ccc
Q 019816           81 VCPDPR-PYN   89 (335)
Q Consensus        81 ~g~~~~-~lL   89 (335)
                      .|+.++ ++|
T Consensus       123 ~~~~~~~~~L  132 (136)
T 2jab_A          123 NGNEDLAEIL  132 (136)
T ss_dssp             TTCHHHHHHH
T ss_pred             CCCHHHHHHH
Confidence            999888 666

>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}

Probab=99.64  E-value=2.1e-16  Score=121.78  Aligned_cols=96  Identities=23%  Similarity=0.186  Sum_probs=87.3

Q ss_pred             cccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHhcCCCCc-ccccccCcccccccccccccc
Q 019816           29 LVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAAVCPDPR-PYNAGYGIIPYKIAKGYYQAV  107 (335)
Q Consensus        29 ~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~~g~~~~-~lL~~~~~~~~~~~~~~~~~~  107 (335)
                      .+|.+|+||||+|+..|+.++++.|+    ..+.+++.+|..|+||||+|+..++.++ ++|        +..+++++.+
T Consensus         4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll----~~g~~~~~~d~~g~t~L~~A~~~~~~~~~~~L--------l~~g~~~~~~   71 (115)
T 2l6b_A            4 WGSKDGNTPLHNAAKNGHAEEVKKLL----SKGADVNARSKDGNTPLHLAAKNGHAEIVKLL--------LAKGADVNAR   71 (115)
T ss_dssp             CCSCSSCCHHHHHHHHTCHHHHHHHT----TTTCCSSCCCSSSCCTTHHHHTTTCHHHHHHH--------TTTTCCTTCC
T ss_pred             ccCCCCCCHHHHHHHcCCHHHHHHHH----HcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHH--------HHcCCCCccc
Confidence            36899999999999999999999999    5688999999999999999999999998 888        8889999999


Q ss_pred             cCCCCCHHHHHHhcCCchHHHHHHHHHHcCCC
Q 019816          108 NKQNISVEHINRYGFPELEKEIKELAKADGNG  139 (335)
Q Consensus       108 n~~G~Tpl~~a~~~~~~~~~~i~~~l~~~~~~  139 (335)
                      |..|+||||+|+..+..   +++++|.+.|+.
T Consensus        72 d~~g~tpl~~A~~~~~~---~~~~~Ll~~ga~  100 (115)
T 2l6b_A           72 SKDGNTPEHLAKKNGHH---EIVKLLDAKGAD  100 (115)
T ss_dssp             CTTCCCTTHHHHTTTCH---HHHHHHHTTSSS
T ss_pred             CCCCCCHHHHHHHCCCH---HHHHHHHHcCCC
Confidence            99999999999988744   788888887765

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1

Probab=99.62  E-value=4.5e-16  Score=121.17  Aligned_cols=84  Identities=27%  Similarity=0.254  Sum_probs=78.6

Q ss_pred             CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHh
Q 019816            1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAA   80 (335)
Q Consensus         1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~   80 (335)
                      +||||+|+..|+.+++++|++.++++.. +|..|+||||+|+..|+.+++++|+    ..+.+++.+|.+|+||||+|+.
T Consensus        36 ~t~L~~A~~~~~~~~~~~Ll~~g~~~~~-~~~~g~t~l~~A~~~~~~~~~~~Ll----~~g~~~~~~~~~g~t~l~~A~~  110 (126)
T 1n0r_A           36 RTPLHLAARNGHLEVVKLLLEAGADVNA-KDKNGRTPLHLAARNGHLEVVKLLL----EAGADVNAKDKNGRTPLHLAAR  110 (126)
T ss_dssp             CCHHHHHHHHTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHH----HTTCCTTCCCTTSCCHHHHHHH
T ss_pred             CcHHHHHHHcCcHHHHHHHHHcCCCCcc-cCCCCCcHHHHHHHcChHHHHHHHH----HcCCCCcccCCCCCCHHHHHHH
Confidence            5899999999999999999999998855 7999999999999999999999999    5688999999999999999999


Q ss_pred             cCCCCc-ccc
Q 019816           81 VCPDPR-PYN   89 (335)
Q Consensus        81 ~g~~~~-~lL   89 (335)
                      .|+.++ ++|
T Consensus       111 ~~~~~~~~~L  120 (126)
T 1n0r_A          111 NGHLEVVKLL  120 (126)
T ss_dssp             TTCHHHHHHH
T ss_pred             cCcHHHHHHH
Confidence            999988 777

>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1

Probab=99.61  E-value=3.6e-16  Score=140.05  Aligned_cols=84  Identities=25%  Similarity=0.245  Sum_probs=79.6

Q ss_pred             CchHhHHHhc---CCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHH
Q 019816            1 MTALHLAAGQ---GNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHV   77 (335)
Q Consensus         1 ~TpLH~Aa~~---G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~   77 (335)
                      +||||+|+..   |+.+++++|++++++++. +|..|+||||+|+.+|+.+++++|+    ..|+++|.+|.+|+||||+
T Consensus       170 ~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~-~d~~g~TpLh~A~~~g~~~~v~~Ll----~~gad~~~~d~~g~tpL~~  244 (278)
T 1dcq_A          170 ETALHLAVRSVDRTSLHIVDFLVQNSGNLDK-QTGKGSTALHYCCLTDNAECLKLLL----RGKASIEIANESGETPLDI  244 (278)
T ss_dssp             CBHHHHHHHHCCTTTHHHHHHHHHHCSCTTC-CCTTCCCHHHHHHHTTCHHHHHHHH----HTTCCTTCCCTTSCCHHHH
T ss_pred             CCcchHHHHhcccchHHHHHHHHHCCCCccc-cCCCCCCHHHHHHHcCCHHHHHHHH----HcCCCCCCccCCCCCHHHH
Confidence            5999999999   899999999999999865 7999999999999999999999999    5789999999999999999


Q ss_pred             HHhcCCCCc-ccc
Q 019816           78 LAAVCPDPR-PYN   89 (335)
Q Consensus        78 Aa~~g~~~~-~lL   89 (335)
                      |+..|+.++ ++|
T Consensus       245 A~~~~~~~~v~~L  257 (278)
T 1dcq_A          245 AKRLKHEHCEELL  257 (278)
T ss_dssp             HHHTTCHHHHHHH
T ss_pred             HHHcCCHHHHHHH
Confidence            999999998 777

>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A

Probab=99.61  E-value=2.3e-16  Score=120.99  Aligned_cols=94  Identities=17%  Similarity=0.030  Sum_probs=78.8

Q ss_pred             CccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHhcCCCCc-ccccccCcccccccccc
Q 019816           25 ECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAAVCPDPR-PYNAGYGIIPYKIAKGY  103 (335)
Q Consensus        25 ~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~~g~~~~-~lL~~~~~~~~~~~~~~  103 (335)
                      ......|.+|+||||+|+..|+.++++.|+    ..+.++|.+|.+|+||||+|+..|+.++ ++|        +..|++
T Consensus        15 ~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll----~~g~~i~~~d~~g~tpLh~A~~~~~~~~v~~L--------l~~ga~   82 (110)
T 2zgd_A           15 PRGSHMGSDLGKKLLEAARAGQDDEVRILM----ANGADVAAKDKNGSTPLHLAARNGHLEVVKLL--------LEAGAD   82 (110)
T ss_dssp             -------CCHHHHHHHHHHHTCHHHHHHHH----HTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHH--------HHTTCC
T ss_pred             CcccccCCccchHHHHHHHcCCHHHHHHHH----HcCCCCCccCCCCCCHHHHHHHcCCHHHHHHH--------HHcCCC
Confidence            334557899999999999999999999999    4688999999999999999999999999 888        788999


Q ss_pred             cccccCCCCCHHHHHHhcCCchHHHHHHHH
Q 019816          104 YQAVNKQNISVEHINRYGFPELEKEIKELA  133 (335)
Q Consensus       104 ~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l  133 (335)
                      ++.+|..|+||+|+|+..+..   ++++.|
T Consensus        83 ~~~~d~~g~tpl~~A~~~~~~---~~~~~L  109 (110)
T 2zgd_A           83 VXAQDKFGKTAFDISIDNGNE---DLAEIL  109 (110)
T ss_dssp             TTCCCTTSCCHHHHHHHHTCH---HHHHHH
T ss_pred             ccccccCCCcHHHHHHHcCCH---HHHHHh
Confidence            999999999999999987754   555543

>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1

Probab=99.61  E-value=1.9e-17  Score=154.46  Aligned_cols=119  Identities=8%  Similarity=-0.079  Sum_probs=95.7

Q ss_pred             chHhHHHhcCCHHHHHHHhhhCCCcc--ccccCCCCchHHHHHhcCCHhHHHHHHhcCCccccc---ccccCCCCCchhH
Q 019816            2 TALHLAAGQGNDWIVQEIIQRCPECC--ELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNL---IFEKDVKGNTPFH   76 (335)
Q Consensus         2 TpLH~Aa~~G~~e~v~~Ll~~~~~~~--~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~---~n~~d~~G~TpLH   76 (335)
                      ||||+||+.|+.+++++|++.++...  ...|..|+||||+|+.+|+.+++++|+    ..|++   .+..+.+ +||||
T Consensus        94 T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll----~~gad~~~~~i~~~~-~TpLh  168 (376)
T 2aja_A           94 VICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLC----ELAPTEIMAMIQAEN-YHAFR  168 (376)
T ss_dssp             HHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHH----HSCTTTHHHHHSHHH-HHHHH
T ss_pred             CHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHH----hCCCCccccccCCCC-CCHHH
Confidence            89999999999999999999986321  124667899999999999999999999    34532   2223333 99999


Q ss_pred             HHHhcCCCCc-ccccccCccccccccccccc--ccCCCCCHHHHHH-hcCCchHHHHHHHHHHc
Q 019816           77 VLAAVCPDPR-PYNAGYGIIPYKIAKGYYQA--VNKQNISVEHINR-YGFPELEKEIKELAKAD  136 (335)
Q Consensus        77 ~Aa~~g~~~~-~lL~~~~~~~~~~~~~~~~~--~n~~G~Tpl~~a~-~~~~~~~~~i~~~l~~~  136 (335)
                      +|+..|+.++ ++|        +..|++++.  +|.+|.||||+|+ ..+..   +++++|.+.
T Consensus       169 ~Aa~~G~~eiv~~L--------l~~ga~~~~~~~d~~g~TpL~~Aa~~~G~~---eiv~~Ll~~  221 (376)
T 2aja_A          169 LAAENGHLHVLNRL--------CELAPTEATAMIQAENYYAFRWAAVGRGHH---NVINFLLDC  221 (376)
T ss_dssp             HHHHTTCHHHHHHH--------HHSCGGGHHHHHHHHHHHHHHHHHSTTCCH---HHHHHHTTS
T ss_pred             HHHHCCCHHHHHHH--------HHcCCccchhccCCCCCCHHHHHHHHCCCH---HHHHHHHhC
Confidence            9999999999 888        888999887  9999999999999 88854   777777663

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A

Probab=99.59  E-value=3.9e-16  Score=134.58  Aligned_cols=98  Identities=16%  Similarity=0.074  Sum_probs=76.5

Q ss_pred             CchHhHHHhcCCHHHHHHHhhh-CCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHH
Q 019816            1 MTALHLAAGQGNDWIVQEIIQR-CPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLA   79 (335)
Q Consensus         1 ~TpLH~Aa~~G~~e~v~~Ll~~-~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa   79 (335)
                      +||||+||..|+.+++++|++. +.+++. +|..|+||||+|+..|+.+++++|+    ..|++++.+|.+|+||||+|+
T Consensus       107 ~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~-~d~~g~tpL~~A~~~~~~~~v~~Ll----~~ga~~~~~~~~g~t~l~~A~  181 (222)
T 3ehr_A          107 STALYWACHGGHKDIVEMLFTQPNIELNQ-QNKLGDTALHAAAWKGYADIVQLLL----AKGARTDLRNIEKKLAFDMAT  181 (222)
T ss_dssp             CCHHHHHHHTTCHHHHHHHTTSTTCCCCC-CCTTSCCHHHHHHHHTCHHHHHHHH----HHTCCSCCCCTTSCCHHHHCC
T ss_pred             CCHHHHHHHcCCHHHHHHHHcCCCCCccc-cCCCCCCHHHHHHHcCCHHHHHHHH----HcCCCCccccCCCCCHHHHhc
Confidence            5999999999999999999998 777755 7999999999999999999999999    578999999999999999999


Q ss_pred             hcCCCCc-ccccccCcccccccccccccccCCC
Q 019816           80 AVCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQN  111 (335)
Q Consensus        80 ~~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G  111 (335)
                      ..++.++ +.+        ...+++.+..|.+|
T Consensus       182 ~~~~~~~l~~l--------~~~~~~~~~~~~~~  206 (222)
T 3ehr_A          182 NAACASLLKKK--------QGTDAVRTLSNAED  206 (222)
T ss_dssp             SHHHHHHHC------------------------
T ss_pred             chhHHHHHHHH--------hccchhhhccchhh
Confidence            9988888 777        67777777777654

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A

Probab=99.58  E-value=1.5e-15  Score=118.48  Aligned_cols=95  Identities=14%  Similarity=0.065  Sum_probs=82.5

Q ss_pred             ccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHhcCCCCc-ccccccCccccccccccccccc
Q 019816           30 VDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAAVCPDPR-PYNAGYGIIPYKIAKGYYQAVN  108 (335)
Q Consensus        30 ~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~~g~~~~-~lL~~~~~~~~~~~~~~~~~~n  108 (335)
                      .+..|.||||+|+..|+.++++.|+    ..+.+++.+|.+|+||||+|+..|+.++ ++|        +..+++++.+|
T Consensus         3 ~~~~~~~~l~~A~~~~~~~~v~~ll----~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~L--------l~~g~~~~~~d   70 (123)
T 3aaa_C            3 LGSMCDKEFMWALKNGDLDEVKDYV----AKGEDVNRTLEGGRKPLHYAADCGQLEILEFL--------LLKGADINAPD   70 (123)
T ss_dssp             ----CHHHHHHHHHTTCHHHHHHHH----HTTCCTTSCCTTSSCHHHHHHHTTCHHHHHHH--------HTTTCCTTCCC
T ss_pred             cccccchHHHHHHHcCCHHHHHHHH----HcCCCcCccCCCCCcHHHHHHHcCCHHHHHHH--------HHcCCCCCcCC
Confidence            3678999999999999999999999    4678899999999999999999999999 888        88899999999


Q ss_pred             CCCCCHHHHHHhcCCchHHHHHHHHHHcCCC
Q 019816          109 KQNISVEHINRYGFPELEKEIKELAKADGNG  139 (335)
Q Consensus       109 ~~G~Tpl~~a~~~~~~~~~~i~~~l~~~~~~  139 (335)
                      .+|+||||+|+..+..   ++++.|.+.++.
T Consensus        71 ~~g~tpL~~A~~~~~~---~~v~~Ll~~ga~   98 (123)
T 3aaa_C           71 KHHITPLLSAVYEGHV---SCVKLLLSKGAD   98 (123)
T ss_dssp             TTSCCHHHHHHHHTCH---HHHHHHHHTTCC
T ss_pred             CCCCCHHHHHHHcCCH---HHHHHHHHcCCC
Confidence            9999999999987754   788888876554

>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A

Probab=99.58  E-value=1.2e-15  Score=141.85  Aligned_cols=108  Identities=14%  Similarity=0.061  Sum_probs=79.9

Q ss_pred             CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHh
Q 019816            1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAA   80 (335)
Q Consensus         1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~   80 (335)
                      +||||+|+..|+.+++++|++++++++. +|..|+||||+|+..|+.+++++|+    ..|++++.+|.+|+||||+|+.
T Consensus       236 ~TpLh~Aa~~g~~~iv~~LL~~Gadvn~-~d~~G~TpLh~A~~~g~~~~v~~LL----~~Gad~~~~d~~G~TpL~~A~~  310 (368)
T 3jue_A          236 ATPLIQATAANSLLACEFLLQNGANVNQ-ADSAGRGPLHHATILGHTGLACLFL----KRGADLGARDSEGRDPLTIAME  310 (368)
T ss_dssp             CCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHHTCHHHHHHHH----HTTCCTTCCCTTSCCHHHHHHH
T ss_pred             CCHHHHHHHCCCHHHHHHHHHcCCCCCC-CCCCCCCHHHHHHHcCcHHHHHHHH----HCcCCCCCcCCCCCCHHHHHHH
Confidence            5899999999999999999999999865 7999999999999999999999999    5789999999999999999999


Q ss_pred             cCCCCc-ccccccCcccccc---cccccccccCCCCCHHHHHHhc
Q 019816           81 VCPDPR-PYNAGYGIIPYKI---AKGYYQAVNKQNISVEHINRYG  121 (335)
Q Consensus        81 ~g~~~~-~lL~~~~~~~~~~---~~~~~~~~n~~G~Tpl~~a~~~  121 (335)
                      .++.++ ++|        +.   .+.+....+..+.|+++++...
T Consensus       311 ~g~~~iv~lL--------l~~~~~~~~~~~~~~~~~t~l~i~~~~  347 (368)
T 3jue_A          311 TANADIVTLL--------RLAKMREAEAAQGQAGDETYLDIFRDF  347 (368)
T ss_dssp             TTCHHHHHHH--------HHHHC----------------------
T ss_pred             CCCHHHHHHH--------HHcCCCcccccccCCCCCCHHHHHHHH
Confidence            999998 666        32   2344456677888998887754

>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1

Probab=99.53  E-value=3.3e-16  Score=146.13  Aligned_cols=112  Identities=11%  Similarity=0.001  Sum_probs=92.1

Q ss_pred             chHhHHHhcCCHHHHHHHhhhCCCcc--ccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccc--cCCCCCchhHH
Q 019816            2 TALHLAAGQGNDWIVQEIIQRCPECC--ELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFE--KDVKGNTPFHV   77 (335)
Q Consensus         2 TpLH~Aa~~G~~e~v~~Ll~~~~~~~--~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~--~d~~G~TpLH~   77 (335)
                      ||||+||+.|+.+++++|++++++..  ...+.+ +||||+|+.+|+.+++++|+    ..|++++.  +|.+|+||||+
T Consensus       130 tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~-~TpLh~Aa~~G~~eiv~~Ll----~~ga~~~~~~~d~~g~TpL~~  204 (376)
T 2aja_A          130 QAFRLAAENGHLHVLNRLCELAPTEIMAMIQAEN-YHAFRLAAENGHLHVLNRLC----ELAPTEATAMIQAENYYAFRW  204 (376)
T ss_dssp             HHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHH-HHHHHHHHHTTCHHHHHHHH----HSCGGGHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHcCCHHHHHHHHhCCCCccccccCCCC-CCHHHHHHHCCCHHHHHHHH----HcCCccchhccCCCCCCHHHH
Confidence            79999999999999999999997631  112223 99999999999999999999    56788887  89999999999


Q ss_pred             HH-hcCCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhcCCchHHHHHHHHHHc
Q 019816           78 LA-AVCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPELEKEIKELAKAD  136 (335)
Q Consensus        78 Aa-~~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~~  136 (335)
                      |+ ..|+.++ ++|        +..|.       .|.||+++|+..+..   +++++|.+.
T Consensus       205 Aa~~~G~~eiv~~L--------l~~ga-------~~~taL~~Aa~~g~~---evv~lL~~~  247 (376)
T 2aja_A          205 AAVGRGHHNVINFL--------LDCPV-------MLAYAEIHEFEYGEK---YVNPFIARH  247 (376)
T ss_dssp             HHSTTCCHHHHHHH--------TTSHH-------HHHHHHHCTTTTTTT---THHHHHHHH
T ss_pred             HHHHCCCHHHHHHH--------HhCCC-------ccchHHHHHHHCCCH---HHHHHHHhc
Confidence            99 9999999 887        55553       288999999988754   455555553

>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A

Probab=99.51  E-value=2.4e-14  Score=125.55  Aligned_cols=105  Identities=17%  Similarity=0.121  Sum_probs=90.8

Q ss_pred             CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHh
Q 019816            1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAA   80 (335)
Q Consensus         1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~   80 (335)
                      +||||+||..|+.+++++|++++++++...+..|+||||+|+.+|+.+++++|+    ..|+++|.+|.+|+||||+|+.
T Consensus        78 ~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll----~~ga~~~~~d~~g~t~l~~A~~  153 (244)
T 3ui2_A           78 RTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEALV----ELGADIEVEDERGLTALELARE  153 (244)
T ss_dssp             CBHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHHHHTTCHHHHHHHH----HTTCCTTCCCTTCCCHHHHHHH
T ss_pred             CCHHHHHHHCCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHH----HCCCCCCCCCCCCCcHHHHHHH
Confidence            599999999999999999999999997743488999999999999999999999    5689999999999999999987


Q ss_pred             cCCCCcccccccCcccccccccccccccCCCCCHHHHHHhcCCchHHHHHHHHHHc
Q 019816           81 VCPDPRPYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPELEKEIKELAKAD  136 (335)
Q Consensus        81 ~g~~~~~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~~  136 (335)
                      .++                        +..+.||+++|+..+   ..++++.|.+.
T Consensus       154 ~~~------------------------~~~~~~~l~~a~~~g---~~~iv~~L~~~  182 (244)
T 3ui2_A          154 ILK------------------------TTPKGNPMQFGRRIG---LEKVINVLEGQ  182 (244)
T ss_dssp             HHT------------------------TCCCSSHHHHHHHHH---HHHHHHHHHHH
T ss_pred             HHh------------------------ccCCCCHHHHHHHcC---hHHHHHHHHHh
Confidence            422                        245789999999877   44677777663

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	335
d1n11a_	408	d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta	3e-06
d1n11a_	408	d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta	0.002
d1sw6a_	301	d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker	8e-06
d1sw6a_	301	d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker	0.002
d1ixva_	229	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	1e-04
d1ixva_	229	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	0.002
d1iknd_	221	d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapien	1e-04
d1k1aa_	228	d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId:	1e-04
d1wdya_	285	d.211.1.1 (A:) RNase L, 2-5a-dependent ribonucleas	3e-04
d1oy3d_	255	d.211.1.1 (D:) Transcription factor inhibitor I-ka	5e-04
d2ajaa1	346	a.118.24.1 (A:3-348) Hypothetical protein LPG2416	0.001
d2fo1e1	277	d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis ele	0.002

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.5 bits (109), Expect = 3e-06
 Identities = 21/79 (26%), Positives = 33/79 (41%), Gaps = 5/79 (6%)

Query: 1  MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVV 60
          +T LH+A+  G+  IV+ ++QR      + + +    LH A  +      K+LL     V
Sbjct: 1  LTPLHVASFMGHLPIVKNLLQRGAS-PNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKV 59

Query: 61 KNLIFEKDVKGNTPFHVLA 79
                K     TP H  A
Sbjct: 60 N----AKAKDDQTPLHCAA 74

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.3 bits (85), Expect = 0.002
 Identities = 19/79 (24%), Positives = 31/79 (39%), Gaps = 5/79 (6%)

Query: 1   MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVV 60
            T LH+A+  GN  +V + + +           G++ LH A      +D+  LL +    
Sbjct: 298 YTPLHVASHYGNIKLV-KFLLQHQADVNAKTKLGYSPLHQA-AQQGHTDIVTLLLKNGAS 355

Query: 61  KNLIFEKDVKGNTPFHVLA 79
            N   E    G TP  +  
Sbjct: 356 PN---EVSSDGTTPLAIAK 371

>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 301

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Swi6 ankyrin-repeat fragment
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 44.3 bits (103), Expect = 8e-06
 Identities = 14/82 (17%), Positives = 27/82 (32%), Gaps = 1/82 (1%)

Query: 1   MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVV 60
            T LH      N  +V+ +++         D+ G + L  A+ S +  D          +
Sbjct: 108 NTPLHWLTSIANLELVKHLVKHGSNRLY-GDNMGESCLVKAVKSVNNYDSGTFEALLDYL 166

Query: 61  KNLIFEKDVKGNTPFHVLAAVC 82
              +  +D    T  H +    
Sbjct: 167 YPCLILEDSMNRTILHHIIITS 188

>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 301

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Swi6 ankyrin-repeat fragment
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 37.3 bits (85), Expect = 0.002
 Identities = 10/41 (24%), Positives = 18/41 (43%), Gaps = 1/41 (2%)

Query: 1   MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFA 41
            T L++AA  GN  IV  ++    +   + +  G   + F 
Sbjct: 260 DTCLNIAARLGNISIVDALLDYGAD-PFIANKSGLRPVDFG 299

>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 229

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 40.6 bits (93), Expect = 1e-04
 Identities = 11/40 (27%), Positives = 17/40 (42%)

Query: 2  TALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFA 41
            LH A  +   + VQE++   P      D  G   LH++
Sbjct: 2  YPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWS 41

>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 229

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 37.1 bits (84), Expect = 0.002
 Identities = 17/77 (22%), Positives = 27/77 (35%), Gaps = 3/77 (3%)

Query: 1   MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVV 60
              LH AA  G+  +++ +           D +GW  L  A+          L+ +Y   
Sbjct: 139 QIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAE 198

Query: 61  KNLIFEKDVKGNTPFHV 77
            +L    D KG     V
Sbjct: 199 YDL---VDNKGAKAEDV 212

>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 221

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: I-kappa-B-alpha
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.6 bits (93), Expect = 1e-04
 Identities = 9/45 (20%), Positives = 18/45 (40%), Gaps = 3/45 (6%)

Query: 1  MTALHLAAGQGNDWIVQEIIQRCPECCELV---DDRGWNVLHFAM 42
           + LHLA       +  E+I++       +   ++     LH A+
Sbjct: 3  DSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAV 47

>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]} Length = 228

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: bcl-3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.2 bits (92), Expect = 1e-04
 Identities = 11/45 (24%), Positives = 20/45 (44%), Gaps = 3/45 (6%)

Query: 1  MTALHLAAGQGNDWIVQEIIQRCPEC---CELVDDRGWNVLHFAM 42
           T LH+A  QGN   V  ++    +     ++ ++     LH A+
Sbjct: 4  DTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAV 48

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.9 bits (92), Expect = 3e-04
 Identities = 20/79 (25%), Positives = 37/79 (46%), Gaps = 6/79 (7%)

Query: 1   MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHL---LNEY 57
            TAL  AA +G+  +++ ++          D+ G N L  A++S D SD++ +   L ++
Sbjct: 149 ATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDH 208

Query: 58  PVVKNLIFEKDVKGNTPFH 76
               N    +  +G TP  
Sbjct: 209 GADVN---VRGERGKTPLI 224

>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]} Length = 255

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Transcription factor inhibitor I-kappa-B-beta, IKBB
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 38.9 bits (89), Expect = 5e-04
 Identities = 13/43 (30%), Positives = 20/43 (46%), Gaps = 2/43 (4%)

Query: 1  MTALHLAAGQGNDWIVQEIIQRC--PECCELVDDRGWNVLHFA 41
           TALHLA    ++  +  ++      E  +L +D G   LH A
Sbjct: 10 DTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLA 52

>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]} Length = 346

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Pseudo ankyrin repeat-like
family: Pseudo ankyrin repeat
domain: Hypothetical protein LPG2416
species: Legionella pneumophila [TaxId: 446]

 Score = 37.9 bits (87), Expect = 0.001
 Identities = 10/63 (15%), Positives = 20/63 (31%), Gaps = 1/63 (1%)

Query: 1   MTALHLAAGQGNDWIVQEIIQRCPEC-CELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPV 59
             A  LAA  G+  ++  + +  P     ++    ++    A  +     L  L    P 
Sbjct: 127 YQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAENYHAFRLAAENGHLHVLNRLCELAPT 186

Query: 60  VKN 62
              
Sbjct: 187 EAT 189

>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]} Length = 277

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Lin-12
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 37.0 bits (84), Expect = 0.002
 Identities = 17/80 (21%), Positives = 29/80 (36%), Gaps = 5/80 (6%)

Query: 1   MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVV 60
            TALH AA   N  IV+ ++       +  D+ G   +  A        + +L+ +    
Sbjct: 188 RTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQ---- 243

Query: 61  KNLIFEKDVKGNTPFHVLAA 80
              +   D   +T    LA 
Sbjct: 244 GASVEAVDATDHTARQ-LAQ 262

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	335
d1myoa_	118	Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116]	99.88
d1awcb_	153	GA bindinig protein (GABP) beta 1 {Mouse (Mus musc	99.85
d1bi7b_	125	Cell cycle inhibitor p16ink4A {Human (Homo sapiens	99.85
d1ycsb1	130	53BP2 {Human (Homo sapiens) [TaxId: 9606]}	99.84
d1uoha_	223	26S proteasome non-ATPase regulatory subunit 10, g	99.81
d1dcqa1	154	Pyk2-associated protein beta {Mouse (Mus musculus)	99.8
d1ixva_	229	26S proteasome non-ATPase regulatory subunit 10, g	99.8
d1k1aa_	228	bcl-3 {Human (Homo sapiens) [TaxId: 9606]}	99.79
d1oy3d_	255	Transcription factor inhibitor I-kappa-B-beta, IKB	99.78
d1bd8a_	156	Cell cycle inhibitor p19ink4D {Human (Homo sapiens	99.77
d1ot8a_	209	Neurogenic locus notch receptor domain {Fruit fly	99.77
d1oy3d_	255	Transcription factor inhibitor I-kappa-B-beta, IKB	99.77
d1s70b_	291	Myosin phosphatase targeting subunit 1, MYPT1 {Chi	99.76
d1sw6a_	301	Swi6 ankyrin-repeat fragment {Baker's yeast (Sacch	99.75
d1uoha_	223	26S proteasome non-ATPase regulatory subunit 10, g	99.75
d1ihba_	156	p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]	99.75
d2fo1e1	277	Lin-12 {Caenorhabditis elegans [TaxId: 6239]}	99.74
d1wdya_	285	RNase L, 2-5a-dependent ribonuclease {Human (Homo	99.74
d1iknd_	221	I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606	99.74
d1bd8a_	156	Cell cycle inhibitor p19ink4D {Human (Homo sapiens	99.73
d1n11a_	408	Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]}	99.72
d1ixva_	229	26S proteasome non-ATPase regulatory subunit 10, g	99.7
d1ihba_	156	p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]	99.69
d2fo1e1	277	Lin-12 {Caenorhabditis elegans [TaxId: 6239]}	99.69
d1n11a_	408	Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]}	99.69
d1dcqa1	154	Pyk2-associated protein beta {Mouse (Mus musculus)	99.69
d1myoa_	118	Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116]	99.65
d2ajaa1	346	Hypothetical protein LPG2416 {Legionella pneumophi	99.64
d1iknd_	221	I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606	99.64
d1ycsb1	130	53BP2 {Human (Homo sapiens) [TaxId: 9606]}	99.57
d1bi7b_	125	Cell cycle inhibitor p16ink4A {Human (Homo sapiens	99.55
d1wdya_	285	RNase L, 2-5a-dependent ribonuclease {Human (Homo	99.51
d1ot8a_	209	Neurogenic locus notch receptor domain {Fruit fly	99.51
d1sw6a_	301	Swi6 ankyrin-repeat fragment {Baker's yeast (Sacch	99.47
d2ajaa1	346	Hypothetical protein LPG2416 {Legionella pneumophi	99.44
d1awcb_	153	GA bindinig protein (GABP) beta 1 {Mouse (Mus musc	99.43
d1s70b_	291	Myosin phosphatase targeting subunit 1, MYPT1 {Chi	99.42
d1k1aa_	228	bcl-3 {Human (Homo sapiens) [TaxId: 9606]}	99.34

>d1myoa_ d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myotrophin
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.88  E-value=3.8e-24  Score=165.39  Aligned_cols=106  Identities=13%  Similarity=0.012  Sum_probs=100.0

Q ss_pred             CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHh
Q 019816            1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAA   80 (335)
Q Consensus         1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~   80 (335)
                      .|||++|+++|+.++++.|++++++++. +|.+|+||||+|+.+|+.+++++++    ..|+++|.+|.+|+||||+|+.
T Consensus         3 ~tpL~~A~~~g~~~~v~~Ll~~g~d~n~-~~~~g~t~lh~A~~~~~~~~~~~ll----~~g~din~~d~~g~tpLh~A~~   77 (118)
T d1myoa_           3 DKEFMWALKNGDLDEVKDYVAKGEDVNR-TLEGGRKPLHYAADCGQLEILEFLL----LKGADINAPDKHHITPLLSAVY   77 (118)
T ss_dssp             HHHHHHHHHTTCHHHHHHHHTTTCCCCC-CSSSSCCTTHHHHHHSTTTHHHHHH----HSSCTTTCCSSSCSCHHHHHHT
T ss_pred             ChHHHHHHHCCCHHHHHHHHHhhhcccc-ccccccccccccccccccccccccc----cccceeeecccccccchhhhhh
Confidence            3899999999999999999999999865 7999999999999999999999999    5789999999999999999999


Q ss_pred             cCCCCc-ccccccCcccccccccccccccCCCCCHHHHHH
Q 019816           81 VCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINR  119 (335)
Q Consensus        81 ~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~  119 (335)
                      .|+.++ ++|        ++.|+|++.+|++|+||+|+|.
T Consensus        78 ~~~~~~v~~L--------l~~Gad~~~~d~~G~t~l~~a~  109 (118)
T d1myoa_          78 EGHVSCVKLL--------LSKGADKTVKGPDGLTALEATD  109 (118)
T ss_dssp             TTCCHHHHHH--------HTTCCCSSSSSSSTCCCCCTCS
T ss_pred             cCchhhhhhh--------hcccccceeeCCCCCCHHHHHh
Confidence            999999 888        8899999999999999999884

>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: GA bindinig protein (GABP) beta 1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.85  E-value=6.3e-22  Score=158.96  Aligned_cols=119  Identities=18%  Similarity=0.005  Sum_probs=104.1

Q ss_pred             chHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCC-----------------------
Q 019816            2 TALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYP-----------------------   58 (335)
Q Consensus         2 TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~-----------------------   58 (335)
                      ||||.||+.|+.++++.||+++++.+  .|..|+||||+|+..++.+.+..++....                       
T Consensus         4 t~L~~Aa~~g~~~~v~~LL~~ga~~~--~~~~g~t~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (153)
T d1awcb_           4 KKLLEAARAGQDDEVRILMANGAPFT--TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASEGHAN   81 (153)
T ss_dssp             HHHHHHHHHTCHHHHHHHHHHTCCCC--CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHH
T ss_pred             HHHHHHHHCCCHHHHHHHHHcCCCcc--cccCCCccccccccccccccccccccccccccccccccccccccccccccce
Confidence            89999999999999999999999774  59999999999999999999888875211                       


Q ss_pred             ------cccccccccCCCCCchhHHHHhcCCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhcCCchHHHHHH
Q 019816           59 ------VVKNLIFEKDVKGNTPFHVLAAVCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPELEKEIKE  131 (335)
Q Consensus        59 ------~~~~~~n~~d~~G~TpLH~Aa~~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~  131 (335)
                            ..+.+.+.+|.+|+||||+|+..|+.++ ++|        .+.|++++.+|++|.||+|+|+..+..   ++++
T Consensus        82 ~~~~l~~~~~~~~~~~~~g~T~L~~A~~~g~~~iv~~l--------l~~gad~~~~d~~g~Tpl~~A~~~g~~---eiv~  150 (153)
T d1awcb_          82 IVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELL--------IKYGADVHTQSKFCKTAFDISIDNGNE---DLAE  150 (153)
T ss_dssp             HHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHH--------HHTTCCTTCCCTTSCCHHHHHHHTTCH---HHHH
T ss_pred             eeecccccCCccccccccCchHHHhhhhcchhheeeec--------cccccCCcccCCCCCCHHHHHHHcCCH---HHHH
Confidence                  1456778899999999999999999999 888        888999999999999999999988865   5666


Q ss_pred             HH
Q 019816          132 LA  133 (335)
Q Consensus       132 ~l  133 (335)
                      +|
T Consensus       151 lL  152 (153)
T d1awcb_         151 IL  152 (153)
T ss_dssp             HH
T ss_pred             hC
Confidence            54

>d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p16ink4A
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=3.2e-22  Score=156.00  Aligned_cols=117  Identities=12%  Similarity=-0.060  Sum_probs=104.6

Q ss_pred             CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCC-chhHHHH
Q 019816            1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGN-TPFHVLA   79 (335)
Q Consensus         1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~-TpLH~Aa   79 (335)
                      .++||+||++|+.+++++|++++++++. +|..|+||+|+|+ .|+.+++++|+    ..|+++|.+|..|. ||||+|+
T Consensus         4 ~~~L~~Aa~~G~~~~v~~Ll~~gad~n~-~~~~g~t~l~~a~-~g~~~~v~~Ll----~~ga~~~~~~~~~~~~~L~~A~   77 (125)
T d1bi7b_           4 ADWLATAAARGRVEEVRALLEAGANPNA-PNSYGRRPIQVMM-MGSARVAELLL----LHGAEPNCADPATLTRPVHDAA   77 (125)
T ss_dssp             TTHHHHHHHHTCHHHHHHHHTTTCCTTC-CCSSSCCTTTSSC-TTCHHHHHHHH----TTTCCCCCCCTTTCCCHHHHHH
T ss_pred             hhHHHHHHHCCCHHHHHHHHHcCCcccc-ccccccccccccc-ccccccccccc----cccccccccccccccccccccc
Confidence            3789999999999999999999999865 7999999999765 79999999999    57889999999876 6999999


Q ss_pred             hcCCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhcCCchHHHHHHHHH
Q 019816           80 AVCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPELEKEIKELAK  134 (335)
Q Consensus        80 ~~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~  134 (335)
                      +.|+.++ ++|        +..|++++.+|.+|+||+|+|++.+..   +++++|.
T Consensus        78 ~~g~~~~v~~L--------l~~ga~~~~~d~~G~T~l~~A~~~g~~---~~v~~Ll  122 (125)
T d1bi7b_          78 REGFLDTLVVL--------HRAGARLDVRDAWGRLPVDLAEELGHR---DVARYLR  122 (125)
T ss_dssp             HHTCHHHHHHH--------HHHTCCSSCCCTTCCCHHHHHHHHTCH---HHHHHHS
T ss_pred             ccccccccccc--------cccccccccccCCCCCHHHHHHHcCCH---HHHHHHH
Confidence            9999999 888        888999999999999999999988754   6777664

>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 53BP2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.84  E-value=1.7e-21  Score=152.91  Aligned_cols=105  Identities=19%  Similarity=0.108  Sum_probs=97.1

Q ss_pred             chHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHhc
Q 019816            2 TALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAAV   81 (335)
Q Consensus         2 TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~~   81 (335)
                      ++||.||..|+.++++.|++++++++. +|.+|+||||+|+..|+.+++++|+    ..+.++|.+|.+|+||||+|+..
T Consensus         3 ~lL~~A~~~G~~~~v~~Ll~~g~d~n~-~d~~g~t~Lh~A~~~~~~~~~~~ll----~~g~~~~~~d~~g~tpLh~A~~~   77 (130)
T d1ycsb1           3 ALLLDSSLEGEFDLVQRIIYEVDDPSL-PNDEGITALHNAVCAGHTEIVKFLV----QFGVNVNAADSDGWTPLHCAASC   77 (130)
T ss_dssp             HHHHHHHHHTCHHHHHHHTSTTSSCCC-CCTTSCCHHHHHHHHTCHHHHHHHH----HHTCCTTCCCTTCCCHHHHHHHT
T ss_pred             HHHHHHHHcCCHHHHHHHHHcCCCccc-ccccccccccccccccccccccccc----ccccccccccccCcccccccchh
Confidence            579999999999999999999999865 7999999999999999999999999    57889999999999999999999


Q ss_pred             CCCCc-ccccccCcccccccccccccccC-CCCCHHHHHH
Q 019816           82 CPDPR-PYNAGYGIIPYKIAKGYYQAVNK-QNISVEHINR  119 (335)
Q Consensus        82 g~~~~-~lL~~~~~~~~~~~~~~~~~~n~-~G~Tpl~~a~  119 (335)
                      |+.++ ++|        ++.|++++.++. +|+||++++.
T Consensus        78 g~~~~v~~L--------l~~ga~v~~~~~~~~~~~~~~~~  109 (130)
T d1ycsb1          78 NNVQVCKFL--------VESGAAVFAMTYSDMQTAADKCE  109 (130)
T ss_dssp             TCHHHHHHH--------HHTTCCTTCCCSSSCCCHHHHCC
T ss_pred             hHHHHHHHH--------HHcCCCcccccCCCCCCHHHHHH
Confidence            99999 888        889999998875 6899998875

>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.81  E-value=9.8e-21  Score=161.98  Aligned_cols=108  Identities=21%  Similarity=0.121  Sum_probs=51.5

Q ss_pred             chHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHhc
Q 019816            2 TALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAAV   81 (335)
Q Consensus         2 TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~~   81 (335)
                      ++++.|+..|+.++++.|+++++++.. +|.+|+||||+|+.+|+.+++++|+    +.|.+++.+|.+|.||||+|+..
T Consensus        72 ~~~~~~~~~~~~~i~~~Ll~~~~d~~~-~d~~g~tpL~~A~~~~~~e~~~~Ll----~~g~d~~~~~~~~~t~L~~a~~~  146 (223)
T d1uoha_          72 SPLHIAASAGRDEIVKALLGKGAQVNA-VNQNGCTPLHYAASKNRHEIAVMLL----EGGANPDAKDHYEATAMHRAAAK  146 (223)
T ss_dssp             CHHHHHHHHTCHHHHHHHHHTTCCTTC-CCTTCCCHHHHHHHHTCHHHHHHHH----HTTCCTTCCCTTSCCHHHHHHHT
T ss_pred             ccccccccccccchhHHHhccCceeEe-eCCCCCchhhHHHHcCCHHHHHHHH----HCCCCCCCcCCCCCccchhhhhc
Confidence            344455555555555555554444422 4445555555555555555555554    23444444444444455544444


Q ss_pred             CCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhcC
Q 019816           82 CPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGF  122 (335)
Q Consensus        82 g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~  122 (335)
                      ++..+ ++|        ...+.+++.+|.+|+||||+|+..+
T Consensus       147 ~~~~~~~~L--------~~~~~~i~~~d~~g~TpL~~Aa~~g  180 (223)
T d1uoha_         147 GNLKMIHIL--------LYYKASTNIQDTEGNTPLHLACDEE  180 (223)
T ss_dssp             TCHHHHHHH--------HHTTCCSCCCCTTCCCHHHHHHHTT
T ss_pred             CCcchhhhh--------ccccceeeeccCCCCceeccccccC
Confidence            44444 444        3444444444444445544444433

>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Pyk2-associated protein beta
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.80  E-value=7.3e-20  Score=147.61  Aligned_cols=122  Identities=16%  Similarity=0.041  Sum_probs=105.1

Q ss_pred             hHhHHHhcCCHHHHHHHhhhCCCccc-----cccCCCCchHHHHHhc---CCHhHHHHHHhcCCcccccccccCCCCCch
Q 019816            3 ALHLAAGQGNDWIVQEIIQRCPECCE-----LVDDRGWNVLHFAMVS---FDKSDLKHLLNEYPVVKNLIFEKDVKGNTP   74 (335)
Q Consensus         3 pLH~Aa~~G~~e~v~~Ll~~~~~~~~-----~~d~~G~t~Lh~A~~~---g~~~~v~~Ll~~~~~~~~~~n~~d~~G~Tp   74 (335)
                      .|+.|++.+++..+..++..+.+...     ..+..|+||||+|+..   ++.+++++|+    ..|+++|.+|.+|+||
T Consensus         9 ~L~~Av~~~dl~~l~~~~~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll----~~gadin~~d~~g~Tp   84 (154)
T d1dcqa1           9 SLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLV----QNSGNLDKQTGKGSTA   84 (154)
T ss_dssp             HHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHH----HHCSCTTCCCTTCCCH
T ss_pred             HHHHHHHhCCHHHHHHHHHcCCCcCCCCCcccCCCCCCchHHHHHHhcCCCCHHHHHHHH----HcCCChhhhhhhhccc
Confidence            35688899999999999988876533     2367899999999975   5678999999    5789999999999999


Q ss_pred             hHHHHhcCCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhcCCchHHHHHHHHHHcCCC
Q 019816           75 FHVLAAVCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPELEKEIKELAKADGNG  139 (335)
Q Consensus        75 LH~Aa~~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~~~~~  139 (335)
                      ||+|+..|+.++ ++|        +..|++++.+|.+|+||+|+|++.+..   +++++|.+++++
T Consensus        85 Lh~A~~~~~~~~v~~L--------l~~gad~~~~d~~g~tpL~~A~~~~~~---~i~~~L~~~~~~  139 (154)
T d1dcqa1          85 LHYCCLTDNAECLKLL--------LRGKASIEIANESGETPLDIAKRLKHE---HCEELLTQALSG  139 (154)
T ss_dssp             HHHHHHTTCHHHHHHH--------HHTTCCTTCCCTTSCCHHHHHHHTTCH---HHHHHHHHHHTT
T ss_pred             cccccccccccccccc--------cccCccccccCCCCCCHHHHHHHcCCH---HHHHHHHHhCCC
Confidence            999999999999 888        888999999999999999999988754   778888776665

>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.80  E-value=8e-20  Score=156.01  Aligned_cols=124  Identities=19%  Similarity=0.044  Sum_probs=99.0

Q ss_pred             CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCC----------------------
Q 019816            1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYP----------------------   58 (335)
Q Consensus         1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~----------------------   58 (335)
                      +||||+||..|+.+.++.|++..+.....+|.+|+||||+|+..|+.+++++|++...                      
T Consensus         1 n~pLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~   80 (229)
T d1ixva_           1 NYPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACSV   80 (229)
T ss_dssp             CCHHHHHHHHTCHHHHHHHHHHCGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHTTCTTCCGGGCCCTTSCCHHHHHHHH
T ss_pred             CHhHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCCHHHHHHHcCCccccchhhhhhccccccccccccccccccccccc
Confidence            5899999999999999999998877777799999999999999999999999986110                      


Q ss_pred             ---------------------------------------------cccccccccCCCCCchhHHHHhcCCCCc-cccccc
Q 019816           59 ---------------------------------------------VVKNLIFEKDVKGNTPFHVLAAVCPDPR-PYNAGY   92 (335)
Q Consensus        59 ---------------------------------------------~~~~~~n~~d~~G~TpLH~Aa~~g~~~~-~lL~~~   92 (335)
                                                                   ..+...+.+|.+|+||||+|+..|+.++ +.|   
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L---  157 (229)
T d1ixva_          81 GNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELL---  157 (229)
T ss_dssp             TCHHHHHHHHSSSSCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHH---
T ss_pred             cccccccccccccccccccccccccccccccccccchhhhhhhhhhhcccccccCCCCCCccchhhhcccccccccc---
Confidence                                                         0234455677888888888888888877 555   


Q ss_pred             Ccccccc-cccccccccCCCCCHHHHHHhcCCchHHHHHHHHHH
Q 019816           93 GIIPYKI-AKGYYQAVNKQNISVEHINRYGFPELEKEIKELAKA  135 (335)
Q Consensus        93 ~~~~~~~-~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~  135 (335)
                           .. .+.+++.+|.+|+||||+|+..+..   +++++|.+
T Consensus       158 -----l~~~~~~in~~d~~g~TpLh~A~~~~~~---~~v~~Ll~  193 (229)
T d1ixva_         158 -----CGLGKSAVNWQDKQGWTPLFHALAEGHG---DAAVLLVE  193 (229)
T ss_dssp             -----HTTTCCCSCCCCTTSCCHHHHHHHTTCH---HHHHHHHH
T ss_pred             -----cccccccccccccccCCchhhhcccccH---HHHHHHHH
Confidence                 33 3467888899999999999987744   56665554

>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: bcl-3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.79  E-value=2.1e-20  Score=157.15  Aligned_cols=54  Identities=26%  Similarity=0.231  Sum_probs=48.5

Q ss_pred             CchHhHHHhcCCHHHHHHHhh----hCCCccccccCCCCchHHHHHhcCCHhHHHHHHh
Q 019816            1 MTALHLAAGQGNDWIVQEIIQ----RCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLN   55 (335)
Q Consensus         1 ~TpLH~Aa~~G~~e~v~~Ll~----~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~   55 (335)
                      +||||+||..|+.++++.|++    .+.+++. +|.+|+||||+|+..|+.++++.|++
T Consensus         4 ~TpLh~A~~~g~~~~v~~Ll~~~~~~g~~in~-~d~~g~TpL~~A~~~~~~~iv~~Ll~   61 (228)
T d1k1aa_           4 DTPLHIAVVQGNLPAVHRLVNLFQQGGRELDI-YNNLRQTPLHLAVITTLPSVVRLLVT   61 (228)
T ss_dssp             CCHHHHHHHTTCHHHHHHHHHHHHHTTCCSCC-CCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred             ccHHHHHHHcCCHHHHHHHHHHHHHCCCCCCc-cCCCCCccceehhccccccccccccc
Confidence            699999999999999998875    5666644 79999999999999999999999986

>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Transcription factor inhibitor I-kappa-B-beta, IKBB
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.78  E-value=2.8e-19  Score=155.10  Aligned_cols=129  Identities=18%  Similarity=0.108  Sum_probs=102.2

Q ss_pred             CchHhHHHhcCCHHHHHHHhhhCCCc--cccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHH
Q 019816            1 MTALHLAAGQGNDWIVQEIIQRCPEC--CELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVL   78 (335)
Q Consensus         1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~--~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~A   78 (335)
                      +||||+||++|+.+++++|++.+++.  ...+|.+|+||||+|+.+|+.++++.|+    ..|++++.+|.+|+||||+|
T Consensus        10 ~t~Lh~A~~~~~~~~v~~Ll~~~a~~~~i~~~~~~g~TpL~~A~~~g~~~iv~~Ll----~~ga~i~~~d~~g~tpL~~A   85 (255)
T d1oy3d_          10 DTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLY----AAGAGVLVAERGGHTALHLA   85 (255)
T ss_dssp             CCHHHHHHHTTCHHHHHHHHHHHTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHH----HTTCCSSCCCTTSCCHHHHH
T ss_pred             CCHHHHHHHcCCHHHHHHHHHcCCCcccccCcCCCCCCccchHHhhcccccccccc----cccccccccccccchhhhhh
Confidence            59999999999999999999987653  3457889999999999999999999999    57899999999999999999


Q ss_pred             HhcCCCCc-ccccccC---------------------------------------cccccccccccccccCCCCCHHHHH
Q 019816           79 AAVCPDPR-PYNAGYG---------------------------------------IIPYKIAKGYYQAVNKQNISVEHIN  118 (335)
Q Consensus        79 a~~g~~~~-~lL~~~~---------------------------------------~~~~~~~~~~~~~~n~~G~Tpl~~a  118 (335)
                      +..++.++ +++....                                       .......+.+++.+|.+|+||||+|
T Consensus        86 ~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~d~~g~TpLh~A  165 (255)
T d1oy3d_          86 CRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVA  165 (255)
T ss_dssp             TTTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGTTCCCTTSCCHHHHH
T ss_pred             hccCchHHHHHHHhhccchhcccchhhhhHHhhhcccchHHHHHHHhhcchhHHHHHHhhhcCcccccccccCccccccc
Confidence            99887665 3221000                                       0001123556778899999999999


Q ss_pred             HhcCCchHHHHHHHHHHc
Q 019816          119 RYGFPELEKEIKELAKAD  136 (335)
Q Consensus       119 ~~~~~~~~~~i~~~l~~~  136 (335)
                      +..+..   +++++|.+.
T Consensus       166 ~~~~~~---~~v~~Ll~~  180 (255)
T d1oy3d_         166 VIHKDA---EMVRLLRDA  180 (255)
T ss_dssp             HHTTCH---HHHHHHHHH
T ss_pred             cccccc---ccccchhcc
Confidence            987743   677777663

>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p19ink4D
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.77  E-value=2.6e-19  Score=144.36  Aligned_cols=130  Identities=16%  Similarity=0.036  Sum_probs=94.7

Q ss_pred             chHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHhc
Q 019816            2 TALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAAV   81 (335)
Q Consensus         2 TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~~   81 (335)
                      .+||.||.+|+.++|+.|++.++......|..|+||||+|+ .|+.++++.|+    ..+.+++.++.+|.+|++.++..
T Consensus         4 ~~L~~Aa~~g~~~~vk~lL~~~~~~~n~~d~~g~t~L~~A~-~~~~~~v~~Ll----~~~~~~~~~~~~~~~~l~~~~~~   78 (156)
T d1bd8a_           4 DRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMM-FGSTAIALELL----KQGASPNVQDTSGTSPVHDAART   78 (156)
T ss_dssp             HHHHHHHHHTCHHHHHHHHHTTCCCTTCCCTTSCCHHHHSC-TTCHHHHHHHH----HTTCCTTCCCTTSCCHHHHHHHT
T ss_pred             HHHHHHHHcCCHHHHHHHHHhCCCCCCccCCCCCccccccc-ccccccccccc----ccccccccccccccccccccccc
Confidence            36899999999999999988754333457899999999876 47788888888    35667777777788888888887


Q ss_pred             CCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhcCCchHHHHHHHHHH-------cCCCCCCcchhh
Q 019816           82 CPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPELEKEIKELAKA-------DGNGQYPDGVIK  147 (335)
Q Consensus        82 g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~-------~~~~~~p~~~~~  147 (335)
                      ++.++ +++        ...+++++.+|++|.||||+|+..+..   +++++|.+       +..|.+|++...
T Consensus        79 ~~~~~~~~~--------l~~~~~~n~~~~~~~t~L~~A~~~~~~---~i~~~L~~~~~~~~~d~~G~TpL~~A~  141 (156)
T d1bd8a_          79 GFLDTLKVL--------VEHGADVNVPDGTGALPIHLAVQEGHT---AVVSFLAAESDLHRRDARGLTPLELAL  141 (156)
T ss_dssp             TCHHHHHHH--------HHTTCCSCCCCTTSCCHHHHHHHHTCH---HHHHHHHTTSCTTCCCTTSCCHHHHHH
T ss_pred             ccccccccc--------cccccccccccCCCCeeeccccccccc---cccccccccccccccCCCCCCHHHHHH
Confidence            77777 666        666777777788888888888766543   45555543       234456666544

>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Neurogenic locus notch receptor domain
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.77  E-value=4.3e-19  Score=149.20  Aligned_cols=111  Identities=16%  Similarity=0.110  Sum_probs=69.2

Q ss_pred             CchHhHHHhcCCHHHHHHHhhhCCCccc----------------------------------------------------
Q 019816            1 MTALHLAAGQGNDWIVQEIIQRCPECCE----------------------------------------------------   28 (335)
Q Consensus         1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~----------------------------------------------------   28 (335)
                      +||||+||+.|+.+++++|++.+++++.                                                    
T Consensus        24 ~t~L~~A~~~g~~e~v~~Ll~~g~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (209)
T d1ot8a_          24 ETSLHLAARFARADAAKRLLDAGADANSQDNTGRTPLHAAVAADAMGVFQILLRNRATNLNARMHDGTTPLILAARLAIE  103 (209)
T ss_dssp             CCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTCTTCCTTCCCTTCCCHHHHHHHTTCT
T ss_pred             CCHHHHHHHcCCHHHHHHHHhhccccccccccccccccccccccccccccccccccccccccccccccccccccccccch
Confidence            5999999999999999999998775532                                                    


Q ss_pred             --------------cccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHhcCCCCc-ccccccC
Q 019816           29 --------------LVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAAVCPDPR-PYNAGYG   93 (335)
Q Consensus        29 --------------~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~~g~~~~-~lL~~~~   93 (335)
                                    .+|..|+||||+++.++..++++.++    ..+.++|.+|.+|+||||+|+..|+.++ ++|    
T Consensus       104 ~~~~~L~~~~~~~~~~~~~~~t~l~~~~~~~~~~~~~~l~----~~~~~~~~~d~~g~TpL~~A~~~g~~~~v~~L----  175 (209)
T d1ot8a_         104 GMVEDLITADADINAADNSGKTALHWAAAVNNTEAVNILL----MHHANRDAQDDKDETPLFLAAREGSYEASKAL----  175 (209)
T ss_dssp             THHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHH----HTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHH----
T ss_pred             hhhhhhhhhcccccccCCCCCCcchhhcccCcceeeeeec----cccccccccccccccccchhccccHHHHHHHH----
Confidence                          13344455555555555555555444    2344555555566666666666655555 555    


Q ss_pred             cccccccccccccccCCCCCHHHHHHhcCC
Q 019816           94 IIPYKIAKGYYQAVNKQNISVEHINRYGFP  123 (335)
Q Consensus        94 ~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~  123 (335)
                          ++.|+|++.+|.+|+||||+|++.+.
T Consensus       176 ----l~~gad~n~~d~~g~Tpl~~A~~~~~  201 (209)
T d1ot8a_         176 ----LDNFANREITDHMDRLPRDVASERLH  201 (209)
T ss_dssp             ----HHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred             ----HHCCCCCCCcCCCCCCHHHHHHHcCC
Confidence                55555566666666666666665543

>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Transcription factor inhibitor I-kappa-B-beta, IKBB
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.77  E-value=2.4e-19  Score=155.56  Aligned_cols=124  Identities=20%  Similarity=0.131  Sum_probs=97.4

Q ss_pred             CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCC----------------------
Q 019816            1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYP----------------------   58 (335)
Q Consensus         1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~----------------------   58 (335)
                      +||||+|+..|+.++++.|+++++++.. +|.+|+||||+|+..++.++++.|++...                      
T Consensus        46 ~TpL~~A~~~g~~~iv~~Ll~~ga~i~~-~d~~g~tpL~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~  124 (255)
T d1oy3d_          46 QTALHLAAILGEASTVEKLYAAGAGVLV-AERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTS  124 (255)
T ss_dssp             CCHHHHHHHHTCHHHHHHHHHTTCCSSC-CCTTSCCHHHHHTTTTCHHHHHHHSSSCCSSCCCC----------------
T ss_pred             CCccchHHhhcccccccccccccccccc-cccccchhhhhhhccCchHHHHHHHhhccchhcccchhhhhHHhhhcccch
Confidence            5999999999999999999999999865 79999999999999999999998875110                      


Q ss_pred             ---------------------cccccccccCCCCCchhHHHHhcCCCCc-ccccccCccccccccccccc-ccCCCCCHH
Q 019816           59 ---------------------VVKNLIFEKDVKGNTPFHVLAAVCPDPR-PYNAGYGIIPYKIAKGYYQA-VNKQNISVE  115 (335)
Q Consensus        59 ---------------------~~~~~~n~~d~~G~TpLH~Aa~~g~~~~-~lL~~~~~~~~~~~~~~~~~-~n~~G~Tpl  115 (335)
                                           ..+..++.+|.+|.||||+|+..++.++ ++|        +..+.+.+. .+..|.|||
T Consensus       125 ~~~~~~~~~~~~~~~~~~~~~~~~~~in~~d~~g~TpLh~A~~~~~~~~v~~L--------l~~~~~~~~~~~~~g~TpL  196 (255)
T d1oy3d_         125 HAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLL--------RDAGADLNKPEPTCGRTPL  196 (255)
T ss_dssp             -------------------CCCGGGGTTCCCTTSCCHHHHHHHTTCHHHHHHH--------HHHTCCTTCCCTTTCCCHH
T ss_pred             HHHHHHHhhcchhHHHHHHhhhcCcccccccccCcccccccccccccccccch--------hcccccccccccccccccc
Confidence                                 1245667788899999999999988887 766        555555554 456778888


Q ss_pred             HHHHhcCCchHHHHHHHHHHc
Q 019816          116 HINRYGFPELEKEIKELAKAD  136 (335)
Q Consensus       116 ~~a~~~~~~~~~~i~~~l~~~  136 (335)
                      |+|++.+..   +++++|.++
T Consensus       197 ~~A~~~~~~---~~v~~Ll~~  214 (255)
T d1oy3d_         197 HLAVEAQAA---SVLELLLKA  214 (255)
T ss_dssp             HHHHHTTCH---HHHHHHHHT
T ss_pred             cccccccHH---HHHHHHHHC
Confidence            888766643   566666653

>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myosin phosphatase targeting subunit 1, MYPT1
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.76  E-value=1.7e-19  Score=159.48  Aligned_cols=134  Identities=17%  Similarity=0.046  Sum_probs=109.4

Q ss_pred             chHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCc----------------------
Q 019816            2 TALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPV----------------------   59 (335)
Q Consensus         2 TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~----------------------   59 (335)
                      ||||.||..|+.++|++||++|++++. +|.+|+||||+|+.+|+.+++++|++.-..                      
T Consensus        42 t~l~~A~~~G~~~~v~~Ll~~Gadvn~-~d~~G~T~L~~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~~~L~~a~~~~~~~  120 (291)
T d1s70b_          42 AVFLAACSSGDTEEVLRLLERGADINY-ANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAASCGYLD  120 (291)
T ss_dssp             HHHHHHHHHTCHHHHHHHHHHCCCTTC-BCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHH
T ss_pred             hHHHHHHHcCCHHHHHHHHHCCCCCCc-cCCCCCcHHHHHHhcCCceeeeeecccccccccccccccccccccccccccc
Confidence            789999999999999999999999865 799999999999999999999999862100                      


Q ss_pred             -------------------------------------------------------------------ccccccccCCCCC
Q 019816           60 -------------------------------------------------------------------VKNLIFEKDVKGN   72 (335)
Q Consensus        60 -------------------------------------------------------------------~~~~~n~~d~~G~   72 (335)
                                                                                         ........+.+|.
T Consensus       121 ~~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  200 (291)
T d1s70b_         121 IAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGG  200 (291)
T ss_dssp             HHHHHHHTTCCTTCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCC
T ss_pred             hhhcccccCcccccccccCccccccccccccchhccccccccccccccccccccccccccchhhhcccccccccccCCCC
Confidence                                                                               0011234567789


Q ss_pred             chhHHHHhcCCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhcCCchHHHHHHHHHHcC--------CCCCCc
Q 019816           73 TPFHVLAAVCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPELEKEIKELAKADG--------NGQYPD  143 (335)
Q Consensus        73 TpLH~Aa~~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~~~--------~~~~p~  143 (335)
                      ||||+|+..|+.++ +.|        +..|++++.+|.+|+||||+|+..+..   +++++|.++|        .|.+|+
T Consensus       201 t~L~~a~~~~~~~~~~~L--------l~~g~din~~~~~g~TpL~~A~~~g~~---~iv~lLl~~Gadv~~~d~~G~TaL  269 (291)
T d1s70b_         201 TALHVAAAKGYTEVLKLL--------IQARYDVNIKDYDGWTPLHAAAHWGKE---EACRILVENLCDMEAVNKVGQTAF  269 (291)
T ss_dssp             CHHHHHHHHTCHHHHHHH--------HTTTCCTTCCCTTCCCHHHHHHHTTCH---HHHHHHHHTTCCTTCCCTTSCCTT
T ss_pred             ChhhHHHHcCChhhhccc--------ccceecccccccCCCCHHHHHHHcCCH---HHHHHHHHCCCCCCCcCCCCCCHH
Confidence            99999999999888 777        788999999999999999999988754   7788777754        346777


Q ss_pred             chhh
Q 019816          144 GVIK  147 (335)
Q Consensus       144 ~~~~  147 (335)
                      +.+.
T Consensus       270 ~~A~  273 (291)
T d1s70b_         270 DVAD  273 (291)
T ss_dssp             TSCC
T ss_pred             HHHH
Confidence            7653

>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Swi6 ankyrin-repeat fragment
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.75  E-value=2.9e-19  Score=159.82  Aligned_cols=45  Identities=22%  Similarity=0.175  Sum_probs=41.6

Q ss_pred             CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCC
Q 019816            1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFD   46 (335)
Q Consensus         1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~   46 (335)
                      +||||+||..|+.++|+.|+++++++.. +|..|+||||.||..++
T Consensus       108 ~T~LH~Aa~~g~~~~v~~Ll~~gad~~~-~d~~G~TpL~~A~~~~~  152 (301)
T d1sw6a_         108 NTPLHWLTSIANLELVKHLVKHGSNRLY-GDNMGESCLVKAVKSVN  152 (301)
T ss_dssp             CCHHHHHHHTTCHHHHHHHHHTTCCTTB-CCTTCCCHHHHHHHSSH
T ss_pred             CCHHHHHHHcCCHHHHHHHHHCCCCCCc-CCcccccHHHHhhhccc
Confidence            5999999999999999999999999865 79999999999998764

>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.75  E-value=1.3e-18  Score=148.60  Aligned_cols=134  Identities=22%  Similarity=0.168  Sum_probs=109.4

Q ss_pred             CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHh
Q 019816            1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAA   80 (335)
Q Consensus         1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~   80 (335)
                      +||||+||..|+.+++++++..+.+... .+..+.++++.++..++.++++.|+    ..+.+++.+|.+|+||||+|+.
T Consensus        38 ~TpLh~Aa~~g~~e~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~Ll----~~~~d~~~~d~~g~tpL~~A~~  112 (223)
T d1uoha_          38 RTALHWACSAGHTEIVEFLLQLGVPVND-KDDAGWSPLHIAASAGRDEIVKALL----GKGAQVNAVNQNGCTPLHYAAS  112 (223)
T ss_dssp             CCHHHHHHHHTCHHHHHHHHHHTCCSCC-CCTTCCCHHHHHHHHTCHHHHHHHH----HTTCCTTCCCTTCCCHHHHHHH
T ss_pred             CCHHHHHHHhhhhccccccccccccccc-ccccccccccccccccccchhHHHh----ccCceeEeeCCCCCchhhHHHH
Confidence            5899999999999999999998877755 5778899999999999999999998    4677889999999999999999


Q ss_pred             cCCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhcCCchHHHHHHHHHH--------cCCCCCCcchhhhhh
Q 019816           81 VCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPELEKEIKELAKA--------DGNGQYPDGVIKMNK  150 (335)
Q Consensus        81 ~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~--------~~~~~~p~~~~~~~~  150 (335)
                      .|+.++ ++|        ++.|++++.+|..|.||+|+++..+..   ++.+.|.+        +..|.+|++......
T Consensus       113 ~~~~e~~~~L--------l~~g~d~~~~~~~~~t~L~~a~~~~~~---~~~~~L~~~~~~i~~~d~~g~TpL~~Aa~~g  180 (223)
T d1uoha_         113 KNRHEIAVML--------LEGGANPDAKDHYEATAMHRAAAKGNL---KMIHILLYYKASTNIQDTEGNTPLHLACDEE  180 (223)
T ss_dssp             HTCHHHHHHH--------HHTTCCTTCCCTTSCCHHHHHHHTTCH---HHHHHHHHTTCCSCCCCTTCCCHHHHHHHTT
T ss_pred             cCCHHHHHHH--------HHCCCCCCCcCCCCCccchhhhhcCCc---chhhhhccccceeeeccCCCCceeccccccC
Confidence            999888 888        788899999999999999999987754   44555544        234456777665443

>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: p18ink4C(ink6)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.75  E-value=9.4e-19  Score=140.51  Aligned_cols=119  Identities=13%  Similarity=-0.034  Sum_probs=102.7

Q ss_pred             chHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHhc
Q 019816            2 TALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAAV   81 (335)
Q Consensus         2 TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~~   81 (335)
                      +|||+||..|+.++++.|++++++++. +|.+|+||||+|+ .|+.++++.|+    ..+++++.++.+|.++||.++..
T Consensus         3 ~~Lh~Aa~~g~~~~v~~Ll~~g~d~n~-~d~~g~TpL~~A~-~~~~ei~~~Ll----~~~a~~~~~~~~~~~~l~~~~~~   76 (156)
T d1ihba_           3 NELASAAARGDLEQLTSLLQNNVNVNA-QNGFGRTALQVMK-LGNPEIARRLL----LRGANPDLKDRTGFAVIHDAARA   76 (156)
T ss_dssp             HHHHHHHHHTCHHHHHHHTTSCCCTTC-CCTTSCCHHHHCC-SSCHHHHHHHH----HTTCCTTCCCTTSCCHHHHHHHH
T ss_pred             HHHHHHHHcCCHHHHHHHHHCCCCcCc-cCCcccccccccc-ccccccccccc----ccccccccccccCcccccccccc
Confidence            699999999999999999999999855 7999999999886 78999999999    56788999999999999999999


Q ss_pred             CCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhcCCchHHHHHHHHHHcC
Q 019816           82 CPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPELEKEIKELAKADG  137 (335)
Q Consensus        82 g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~~~  137 (335)
                      ++... ..+        ...+.+.+..|..|.+|+++|+..+..   ++++.|.+.+
T Consensus        77 ~~~~~~~~l--------~~~~~~~~~~~~~~~~~l~~a~~~~~~---~~~~~Ll~~~  122 (156)
T d1ihba_          77 GFLDTLQTL--------LEFQADVNIEDNEGNLPLHLAAKEGHL---RVVEFLVKHT  122 (156)
T ss_dssp             TCHHHHHHH--------HHTTCCTTCCCTTSCCHHHHHHHTTCH---HHHHHHHHHS
T ss_pred             ccccccccc--------ccccccccccccccccccccccccccc---cccccccccc
Confidence            98888 666        677888899999999999999977754   5566555533

>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Lin-12
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.74  E-value=1.2e-18  Score=152.61  Aligned_cols=54  Identities=20%  Similarity=0.138  Sum_probs=48.9

Q ss_pred             CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHh
Q 019816            1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLN   55 (335)
Q Consensus         1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~   55 (335)
                      +||||+|++.|+.+++++|+++|++++. +|.+|+||||+|+..++.+++..+..
T Consensus        75 ~TpLh~A~~~g~~~iv~~Ll~~Gad~n~-~~~~g~t~l~~a~~~~~~~~~~~l~~  128 (277)
T d2fo1e1          75 NTPLMLAVLARRRRLVAYLMKAGADPTI-YNKSERSALHQAAANRDFGMMVYMLN  128 (277)
T ss_dssp             CCHHHHHHHHTCHHHHHHHHHTTCCSCC-CCTTCCCHHHHHHHTTCHHHHHHHTT
T ss_pred             Ceeecccccccccccccccccccccccc-ccccccccccchhhhcchhhhhhhhh
Confidence            5999999999999999999999999855 79999999999999999888777654

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.74  E-value=1.7e-18  Score=152.19  Aligned_cols=55  Identities=20%  Similarity=0.211  Sum_probs=49.9

Q ss_pred             CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHh
Q 019816            1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLN   55 (335)
Q Consensus         1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~   55 (335)
                      +|+||.|++.|+.++++.|+++|++++...+..|+||||+|+.+|+.+++++|++
T Consensus         6 ~~~L~~Ai~~~~~e~vk~Ll~~G~din~~~~~~g~tpL~~A~~~~~~eiv~~L~~   60 (285)
T d1wdya_           6 NHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLR   60 (285)
T ss_dssp             HHHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHH
T ss_pred             cHHHHHHHHcCCHHHHHHHHHCCCCcCccCCCCCCCHHHHHHHcCCHHHhhhhcc
Confidence            3789999999999999999999999877667789999999999999999999886

>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: I-kappa-B-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.74  E-value=4.7e-19  Score=150.93  Aligned_cols=113  Identities=17%  Similarity=0.044  Sum_probs=70.3

Q ss_pred             CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCc---------------------
Q 019816            1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPV---------------------   59 (335)
Q Consensus         1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~---------------------   59 (335)
                      +||||+|+..|+.+++++|++.++++.. +|..|+||||+|+.+++.++++.++.....                     
T Consensus        40 ~TpLh~A~~~~~~~iv~~L~~~g~d~~~-~d~~g~t~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~t~l~~a  118 (221)
T d1iknd_          40 QTPLHLAVITNQPEIAEALLGAGCDPEL-RDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLA  118 (221)
T ss_dssp             CCHHHHHHHTTCHHHHHCCCSCCCCSCC-CCTTCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHH
T ss_pred             Cccccccccccccccccccccccccccc-cccccccccccccccccccccchhhhhcccccccccccccccccchhhhHH
Confidence            5788888888888888888887777744 677788888888877777777776632100                     


Q ss_pred             --------------cccccccc-CCCCCchhHHHHhcCCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhcC
Q 019816           60 --------------VKNLIFEK-DVKGNTPFHVLAAVCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGF  122 (335)
Q Consensus        60 --------------~~~~~n~~-d~~G~TpLH~Aa~~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~  122 (335)
                                    .+..++.+ |.+|+||||+|++.|+.++ ++|        +..|+|++.+|.+|+||+|+|+..+
T Consensus       119 ~~~~~~~~~~~l~~~~~~~~~~~~~~G~T~L~~A~~~g~~~~v~~L--------l~~gad~~~~~~~G~tpl~~A~~~~  189 (221)
T d1iknd_         119 SIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLL--------LKCGADVNRVTYQGYSPYQLTWGRP  189 (221)
T ss_dssp             HHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHH--------HTTTCCSCCCCTTCCCGGGGCTTSS
T ss_pred             hhcCChhheeeecccCcccccccccCCCCccccccccccHHHHHHH--------HhcCCcccccCCCCCCHHHHHHHCC
Confidence                          12222322 2345566666666555555 555        5555556666666666666655544

>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p19ink4D
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.73  E-value=2e-18  Score=139.06  Aligned_cols=117  Identities=15%  Similarity=0.115  Sum_probs=104.4

Q ss_pred             CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHh
Q 019816            1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAA   80 (335)
Q Consensus         1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~   80 (335)
                      +||||+|+ .|+.+++++|++.+.++.. .+.+|.+|++.++..++.++++.++    ..+.++|.+|.+|+||||+|++
T Consensus        37 ~t~L~~A~-~~~~~~v~~Ll~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~l----~~~~~~n~~~~~~~t~L~~A~~  110 (156)
T d1bd8a_          37 KTALQVMM-FGSTAIALELLKQGASPNV-QDTSGTSPVHDAARTGFLDTLKVLV----EHGADVNVPDGTGALPIHLAVQ  110 (156)
T ss_dssp             CCHHHHSC-TTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHH----HTTCCSCCCCTTSCCHHHHHHH
T ss_pred             Cccccccc-ccccccccccccccccccc-ccccccccccccccccccccccccc----ccccccccccCCCCeeeccccc
Confidence            58999886 5899999999999998855 7889999999999999999999999    5678899999999999999999


Q ss_pred             cCCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhcCCchHHHHHHHHHH
Q 019816           81 VCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPELEKEIKELAKA  135 (335)
Q Consensus        81 ~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~  135 (335)
                      .|+.++ ++|        . .+++++.+|.+|+||+|+|+..+..   ++++.|.+
T Consensus       111 ~~~~~i~~~L--------~-~~~~~~~~d~~G~TpL~~A~~~g~~---~iv~~Ll~  154 (156)
T d1bd8a_         111 EGHTAVVSFL--------A-AESDLHRRDARGLTPLELALQRGAQ---DLVDILQG  154 (156)
T ss_dssp             HTCHHHHHHH--------H-TTSCTTCCCTTSCCHHHHHHHSCCH---HHHHHHHT
T ss_pred             cccccccccc--------c-ccccccccCCCCCCHHHHHHHcCCH---HHHHHHHh
Confidence            999998 877        5 5789999999999999999988864   67777654

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.72  E-value=3.6e-18  Score=157.62  Aligned_cols=121  Identities=17%  Similarity=0.089  Sum_probs=105.2

Q ss_pred             CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHh
Q 019816            1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAA   80 (335)
Q Consensus         1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~   80 (335)
                      .||||.|++.++.+++++|+++++++.. .+..+.||||.++..++.++++.++    ..|+++|.+|.+|+||||+|++
T Consensus       265 ~~~l~~a~~~~~~~i~~~Ll~~g~~~~~-~~~~~~t~L~~~~~~~~~~~~~~ll----~~g~~in~~d~~G~T~Lh~A~~  339 (408)
T d1n11a_         265 LTPLHLVAQEGHVPVADVLIKHGVMVDA-TTRMGYTPLHVASHYGNIKLVKFLL----QHQADVNAKTKLGYSPLHQAAQ  339 (408)
T ss_dssp             CCHHHHHHHHTCHHHHHHHHHHTCCTTC-CCSSCCCHHHHHHHSSCSHHHHHHH----HTTCCTTCCCTTSCCHHHHHHH
T ss_pred             CChhhhhhhcCcHHHHHHHHHCCCcccc-ccccccccchhhcccCcceeeeeec----cccccccccCCCCCCHHHHHHH
Confidence            3789999999999999999999988755 6888999999999999999999888    4688999999999999999999


Q ss_pred             cCCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhcCCchHHHHHHHHH
Q 019816           81 VCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFPELEKEIKELAK  134 (335)
Q Consensus        81 ~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~  134 (335)
                      .|+.++ ++|        ++.|+|++.+|++|+||||+|...+.....++++.+.
T Consensus       340 ~g~~~iv~~L--------l~~GAd~n~~d~~G~t~L~~A~~~~~~~iv~~L~~~~  386 (408)
T d1n11a_         340 QGHTDIVTLL--------LKNGASPNEVSSDGTTPLAIAKRLGYISVTDVLKVVT  386 (408)
T ss_dssp             TTCHHHHHHH--------HHTTCCSCCCCSSSCCHHHHHHHTTCHHHHHHHHHHC
T ss_pred             cCCHHHHHHH--------HHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHHH
Confidence            999999 888        8899999999999999999999887653334444443

>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.70  E-value=8.3e-18  Score=143.23  Aligned_cols=120  Identities=19%  Similarity=0.072  Sum_probs=105.1

Q ss_pred             CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHh
Q 019816            1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAA   80 (335)
Q Consensus         1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~   80 (335)
                      .||++.++..++.++++.|+..+.+... .|..|+||||+|+..|+.++++.|++.   .+.++|.+|.+|+||||+|+.
T Consensus       106 ~~~l~~~~~~~~~~~~~~l~~~~~~~~~-~~~~g~t~l~~a~~~~~~~~~~~Ll~~---~~~~in~~d~~g~TpLh~A~~  181 (229)
T d1ixva_         106 VTCLHLAVGKKWFEVSQFLIENGASVRI-KDKFNQIPLHRAASVGSLKLIELLCGL---GKSAVNWQDKQGWTPLFHALA  181 (229)
T ss_dssp             CCHHHHHHHTTCHHHHHHHHHTTCCSCC-CCTTSCCHHHHHHHHTCHHHHHHHHTT---TCCCSCCCCTTSCCHHHHHHH
T ss_pred             ccccccccccchhhhhhhhhhhcccccc-cCCCCCCccchhhhccccccccccccc---ccccccccccccCCchhhhcc
Confidence            4799999999999999999999988755 799999999999999999999999932   346889999999999999999


Q ss_pred             cCCCCc-ccccccCccccc-ccccccccccCCCCCHHHHHHhcCCchHHHHHHHHHHcCC
Q 019816           81 VCPDPR-PYNAGYGIIPYK-IAKGYYQAVNKQNISVEHINRYGFPELEKEIKELAKADGN  138 (335)
Q Consensus        81 ~g~~~~-~lL~~~~~~~~~-~~~~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~~~~  138 (335)
                      .|+.++ ++|        + ..|++++.+|++|+||||+|++.      +++++|.++|+
T Consensus       182 ~~~~~~v~~L--------l~~~gad~~~~d~~g~t~l~~A~~~------~~~~~Ll~~g~  227 (229)
T d1ixva_         182 EGHGDAAVLL--------VEKYGAEYDLVDNKGAKAEDVALNE------QVKKFFLNNVV  227 (229)
T ss_dssp             TTCHHHHHHH--------HHHHCCCSCCCCTTSCCTGGGCSCH------HHHHHHHHHCC
T ss_pred             cccHHHHHHH--------HHhcCCCCCCcCCCCCCHHHHHhhH------HHHHHHHHcCC
Confidence            999998 776        5 46999999999999999999842      57777777665

>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: p18ink4C(ink6)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.69  E-value=1.9e-17  Score=132.78  Aligned_cols=120  Identities=23%  Similarity=0.184  Sum_probs=104.2

Q ss_pred             CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHh
Q 019816            1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAA   80 (335)
Q Consensus         1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~   80 (335)
                      +||||+|+ .|+.|+++.|+++++++.. ++..|.++++.++..++.+.++.++    ..+..++..|..|.+|||+|+.
T Consensus        35 ~TpL~~A~-~~~~ei~~~Ll~~~a~~~~-~~~~~~~~l~~~~~~~~~~~~~~l~----~~~~~~~~~~~~~~~~l~~a~~  108 (156)
T d1ihba_          35 RTALQVMK-LGNPEIARRLLLRGANPDL-KDRTGFAVIHDAARAGFLDTLQTLL----EFQADVNIEDNEGNLPLHLAAK  108 (156)
T ss_dssp             CCHHHHCC-SSCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHHTCHHHHHHHH----HTTCCTTCCCTTSCCHHHHHHH
T ss_pred             cccccccc-ccccccccccccccccccc-ccccCcccccccccccccccccccc----cccccccccccccccccccccc
Confidence            59999885 7999999999999998855 7999999999999999999999998    4667889999999999999999


Q ss_pred             cCCCCc-ccccccCcccccccc-cccccccCCCCCHHHHHHhcCCchHHHHHHHHHHcC
Q 019816           81 VCPDPR-PYNAGYGIIPYKIAK-GYYQAVNKQNISVEHINRYGFPELEKEIKELAKADG  137 (335)
Q Consensus        81 ~g~~~~-~lL~~~~~~~~~~~~-~~~~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~~~  137 (335)
                      .++.+. ++|        +.++ .+.+.+|++|+||||+|+..+..   +++++|.++|
T Consensus       109 ~~~~~~~~~L--------l~~~~~~~~~~d~~g~TpL~~A~~~~~~---~iv~~Ll~~G  156 (156)
T d1ihba_         109 EGHLRVVEFL--------VKHTASNVGHRNHKGDTACDLARLYGRN---EVVSLMQANG  156 (156)
T ss_dssp             TTCHHHHHHH--------HHHSCCCTTCCCTTSCCHHHHHHHTTCH---HHHHHHHHTC
T ss_pred             cccccccccc--------cccccccccccCCCCCCHHHHHHHcCCH---HHHHHHHhcC
Confidence            999988 665        4444 58999999999999999988743   6778777654

>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Lin-12
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.69  E-value=6e-18  Score=147.96  Aligned_cols=81  Identities=15%  Similarity=0.037  Sum_probs=71.5

Q ss_pred             CchHhHHHhcCCHHHHHHH--------hhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCC
Q 019816            1 MTALHLAAGQGNDWIVQEI--------IQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGN   72 (335)
Q Consensus         1 ~TpLH~Aa~~G~~e~v~~L--------l~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~   72 (335)
                      +||||+||..|+.++++.|        ++.|++++. +|.+|+||||+|+.+|+.+++++|+    +.|+++|.+|.+|+
T Consensus        34 ~T~Lh~A~~~g~~~~v~~Ll~~~~~~~l~~Gadvn~-~d~~G~TpLh~A~~~g~~~iv~~Ll----~~Gad~n~~~~~g~  108 (277)
T d2fo1e1          34 RTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNA-MDCDENTPLMLAVLARRRRLVAYLM----KAGADPTIYNKSER  108 (277)
T ss_dssp             CCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCCTTC-CCTTSCCHHHHHHHHTCHHHHHHHH----HTTCCSCCCCTTCC
T ss_pred             ccHHHHHHHcCCHHHHHHHHhcchhHHHHcCCCccc-cCCCCCeeecccccccccccccccc----cccccccccccccc
Confidence            5999999999999988776        455778865 7999999999999999999999999    57899999999999


Q ss_pred             chhHHHHhcCCCCc
Q 019816           73 TPFHVLAAVCPDPR   86 (335)
Q Consensus        73 TpLH~Aa~~g~~~~   86 (335)
                      ||||+|...++...
T Consensus       109 t~l~~a~~~~~~~~  122 (277)
T d2fo1e1         109 SALHQAAANRDFGM  122 (277)
T ss_dssp             CHHHHHHHTTCHHH
T ss_pred             ccccchhhhcchhh
Confidence            99999988776543

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.69  E-value=2.1e-17  Score=152.44  Aligned_cols=81  Identities=26%  Similarity=0.202  Sum_probs=76.2

Q ss_pred             CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHh
Q 019816            1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAA   80 (335)
Q Consensus         1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~   80 (335)
                      .||||+||..|+.++|+.|+++|++++. .|..|+||||+|+..|+.+++++|+    +.|+++|.+|.+|+||||+|+.
T Consensus         1 ~TpL~~Aa~~g~~~~v~~Ll~~g~~in~-~d~~g~TpL~~A~~~g~~~iv~~Ll----~~gadi~~~~~~g~t~L~~A~~   75 (408)
T d1n11a_           1 LTPLHVASFMGHLPIVKNLLQRGASPNV-SNVKVETPLHMAARAGHTEVAKYLL----QNKAKVNAKAKDDQTPLHCAAR   75 (408)
T ss_dssp             CCHHHHHHHHTCHHHHHHHHHTTCCSCC-SSSCCCCHHHHHHHHTCHHHHHHHH----HHTCCSSCCCTTSCCHHHHHHH
T ss_pred             CChHHHHHHCcCHHHHHHHHHCCCCCCC-CCCCCCCHHHHHHHcCCHHHHHHHH----HCcCCCCCCCCCCCCHHHHHHH
Confidence            4999999999999999999999998865 7999999999999999999999999    5789999999999999999999


Q ss_pred             cCCCCc
Q 019816           81 VCPDPR   86 (335)
Q Consensus        81 ~g~~~~   86 (335)
                      .|+.+.
T Consensus        76 ~g~~~~   81 (408)
T d1n11a_          76 IGHTNM   81 (408)
T ss_dssp             HTCHHH
T ss_pred             cCCHHH
Confidence            998776

>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Pyk2-associated protein beta
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.69  E-value=1.1e-17  Score=134.58  Aligned_cols=84  Identities=25%  Similarity=0.245  Sum_probs=77.8

Q ss_pred             CchHhHHHhc---CCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHH
Q 019816            1 MTALHLAAGQ---GNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHV   77 (335)
Q Consensus         1 ~TpLH~Aa~~---G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~   77 (335)
                      +||||+|++.   |+.+++++|++++++++. +|.+|+||||+|+..|+.++++.|+    ..|++++.+|.+|+||||+
T Consensus        46 ~t~Lh~A~~~~~~~~~~iv~~Ll~~gadin~-~d~~g~TpLh~A~~~~~~~~v~~Ll----~~gad~~~~d~~g~tpL~~  120 (154)
T d1dcqa1          46 ETALHLAVRSVDRTSLHIVDFLVQNSGNLDK-QTGKGSTALHYCCLTDNAECLKLLL----RGKASIEIANESGETPLDI  120 (154)
T ss_dssp             CBHHHHHHHHCCTTTHHHHHHHHHHCSCTTC-CCTTCCCHHHHHHHTTCHHHHHHHH----HTTCCTTCCCTTSCCHHHH
T ss_pred             CchHHHHHHhcCCCCHHHHHHHHHcCCChhh-hhhhhcccccccccccccccccccc----ccCccccccCCCCCCHHHH
Confidence            5899999974   789999999999999855 8999999999999999999999999    5789999999999999999


Q ss_pred             HHhcCCCCc-ccc
Q 019816           78 LAAVCPDPR-PYN   89 (335)
Q Consensus        78 Aa~~g~~~~-~lL   89 (335)
                      |++.|+.++ ++|
T Consensus       121 A~~~~~~~i~~~L  133 (154)
T d1dcqa1         121 AKRLKHEHCEELL  133 (154)
T ss_dssp             HHHTTCHHHHHHH
T ss_pred             HHHcCCHHHHHHH
Confidence            999999998 766

>d1myoa_ d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myotrophin
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.65  E-value=1.4e-16  Score=122.24  Aligned_cols=90  Identities=14%  Similarity=0.073  Sum_probs=81.3

Q ss_pred             CchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHhcCCCCc-ccccccCcccccccccccccccCCCCC
Q 019816           35 WNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAAVCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNIS  113 (335)
Q Consensus        35 ~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~T  113 (335)
                      .|||++|+++|+.++++.|+    ..|+++|.+|.+|+||||+|+..|+.++ +++        ...|++++.+|.+|+|
T Consensus         3 ~tpL~~A~~~g~~~~v~~Ll----~~g~d~n~~~~~g~t~lh~A~~~~~~~~~~~l--------l~~g~din~~d~~g~t   70 (118)
T d1myoa_           3 DKEFMWALKNGDLDEVKDYV----AKGEDVNRTLEGGRKPLHYAADCGQLEILEFL--------LLKGADINAPDKHHIT   70 (118)
T ss_dssp             HHHHHHHHHTTCHHHHHHHH----TTTCCCCCCSSSSCCTTHHHHHHSTTTHHHHH--------HHSSCTTTCCSSSCSC
T ss_pred             ChHHHHHHHCCCHHHHHHHH----Hhhhcccccccccccccccccccccccccccc--------ccccceeeeccccccc
Confidence            47999999999999999999    5789999999999999999999999999 888        8889999999999999


Q ss_pred             HHHHHHhcCCchHHHHHHHHHHcCCC
Q 019816          114 VEHINRYGFPELEKEIKELAKADGNG  139 (335)
Q Consensus       114 pl~~a~~~~~~~~~~i~~~l~~~~~~  139 (335)
                      |||+|+..+..   ++++.|.+.|+.
T Consensus        71 pLh~A~~~~~~---~~v~~Ll~~Gad   93 (118)
T d1myoa_          71 PLLSAVYEGHV---SCVKLLLSKGAD   93 (118)
T ss_dssp             HHHHHHTTTCC---HHHHHHHTTCCC
T ss_pred             chhhhhhcCch---hhhhhhhccccc
Confidence            99999988755   778888776543

>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]}

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Pseudo ankyrin repeat-like
family: Pseudo ankyrin repeat
domain: Hypothetical protein LPG2416
species: Legionella pneumophila [TaxId: 446]

Probab=99.64  E-value=1.4e-18  Score=158.35  Aligned_cols=121  Identities=7%  Similarity=-0.114  Sum_probs=96.4

Q ss_pred             CchHhHHHhcCCHHHHHH---HhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccC--CCCCchh
Q 019816            1 MTALHLAAGQGNDWIVQE---IIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKD--VKGNTPF   75 (335)
Q Consensus         1 ~TpLH~Aa~~G~~e~v~~---Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d--~~G~TpL   75 (335)
                      +||||+||++||.++++.   |++.+++++. +|.+|+||||+||.+|+.+++++|+    ..|++++..|  .+|+|||
T Consensus        91 ~t~L~~Aa~~g~~~~~~~~~~L~~~~~~in~-~~~~g~taL~~Aa~~G~~~~v~~Ll----~~g~~~~~~~~~~~g~t~L  165 (346)
T d2ajaa1          91 EVICFVAAITGCSSALDTLCLLLTSDEIVKV-IQAENYQAFRLAAENGHLHVLNRLC----ELAPTEIMAMIQAENYHAF  165 (346)
T ss_dssp             HHHHHHHHHHCCHHHHHHHTTC--CCSSCC---CHHHHHHHHHHHHTTCHHHHHHHH----HSCTTTHHHHHSHHHHHHH
T ss_pred             CcHHHHHHHhCCHHHHHHHHHHHhCCCcccc-cCCCCCCHHHHHHHCCCHHHHHHHH----HcCCCccccccccCCCChh
Confidence            389999999999887765   7788888865 7999999999999999999999999    5677888766  4699999


Q ss_pred             HHHHhcCCCCc-ccccccCccccccccccc---ccccCCCCCHHHHHHhcCCchHHHHHHHHHHcC
Q 019816           76 HVLAAVCPDPR-PYNAGYGIIPYKIAKGYY---QAVNKQNISVEHINRYGFPELEKEIKELAKADG  137 (335)
Q Consensus        76 H~Aa~~g~~~~-~lL~~~~~~~~~~~~~~~---~~~n~~G~Tpl~~a~~~~~~~~~~i~~~l~~~~  137 (335)
                      |+|++.|+.++ ++|        +..+.+.   +..+.+|.||++.|+.++..   +++++|.+.+
T Consensus       166 ~~Aa~~g~~~iv~~L--------l~~~~~~~~~~~~~~~~~t~l~~A~~~g~~---~iv~~Ll~~g  220 (346)
T d2ajaa1         166 RLAAENGHLHVLNRL--------CELAPTEATAMIQAENYYAFRWAAVGRGHH---NVINFLLDCP  220 (346)
T ss_dssp             HHHHHTTCHHHHHHH--------HHSCGGGHHHHHHHHHHHHHHHHHSTTCCH---HHHHHHTTSH
T ss_pred             HHHHHHhhHHHHHHH--------HHcCCcccccccccCCCcchhhHHhhcCHH---HHHHHHHhCC
Confidence            99999999999 888        6666543   45556778899999887754   6777776644

>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: I-kappa-B-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.64  E-value=5.5e-17  Score=137.86  Aligned_cols=129  Identities=16%  Similarity=0.016  Sum_probs=91.9

Q ss_pred             CchHhHHHhcCCHHHHHH----HhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhH
Q 019816            1 MTALHLAAGQGNDWIVQE----IIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFH   76 (335)
Q Consensus         1 ~TpLH~Aa~~G~~e~v~~----Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH   76 (335)
                      +||||+|+..|+.++++.    +...+.+++ .+|.+|+||||+|+..|+.+++++|+    ..|++++.+|.+|.||||
T Consensus         3 ~t~Lh~A~~~g~~~~~~~li~~~~~~~~~in-~~d~~g~TpLh~A~~~~~~~iv~~L~----~~g~d~~~~d~~g~t~l~   77 (221)
T d1iknd_           3 DSFLHLAIIHEEKALTMEVIRQVKGDLAFLN-FQNNLQQTPLHLAVITNQPEIAEALL----GAGCDPELRDFRGNTPLH   77 (221)
T ss_dssp             CCTTHHHHHTTCSSSSSCCCC-----CCCCC-CCCTTCCCHHHHHHHTTCHHHHHCCC----SCCCCSCCCCTTCCCHHH
T ss_pred             ChHHHHHHHcCCHHHHHHHHHHHHhCCCCcc-cCCCCCCccccccccccccccccccc----cccccccccccccccccc
Confidence            599999999999755554    445666664 47999999999999999999999888    678999999999999999


Q ss_pred             HHHhcCCCCc-ccccc--cC--------------ccc---------------ccccccccccc-cCCCCCHHHHHHhcCC
Q 019816           77 VLAAVCPDPR-PYNAG--YG--------------IIP---------------YKIAKGYYQAV-NKQNISVEHINRYGFP  123 (335)
Q Consensus        77 ~Aa~~g~~~~-~lL~~--~~--------------~~~---------------~~~~~~~~~~~-n~~G~Tpl~~a~~~~~  123 (335)
                      +++..++.++ +.+..  ..              ..+               +...+.+.+.. +.+|.||||+|+..+.
T Consensus        78 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~G~T~L~~A~~~g~  157 (221)
T d1iknd_          78 LACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQN  157 (221)
T ss_dssp             HHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTC
T ss_pred             cccccccccccchhhhhcccccccccccccccccchhhhHHhhcCChhheeeecccCcccccccccCCCCcccccccccc
Confidence            9999887766 33310  00              000               01223344443 3568888888887774


Q ss_pred             chHHHHHHHHHHcC
Q 019816          124 ELEKEIKELAKADG  137 (335)
Q Consensus       124 ~~~~~i~~~l~~~~  137 (335)
                      .   +++++|.+.|
T Consensus       158 ~---~~v~~Ll~~g  168 (221)
T d1iknd_         158 P---DLVSLLLKCG  168 (221)
T ss_dssp             H---HHHHHHHTTT
T ss_pred             H---HHHHHHHhcC
Confidence            4   6777777643

>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 53BP2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.57  E-value=8.8e-16  Score=119.68  Aligned_cols=89  Identities=8%  Similarity=-0.048  Sum_probs=81.4

Q ss_pred             chHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHhcCCCCc-ccccccCcccccccccccccccCCCCCH
Q 019816           36 NVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAAVCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISV  114 (335)
Q Consensus        36 t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tp  114 (335)
                      ++||.||..|+.++++.|+    ..|+++|.+|.+|+||||+|+..|+.++ +++        ...+++++.+|.+|+||
T Consensus         3 ~lL~~A~~~G~~~~v~~Ll----~~g~d~n~~d~~g~t~Lh~A~~~~~~~~~~~l--------l~~g~~~~~~d~~g~tp   70 (130)
T d1ycsb1           3 ALLLDSSLEGEFDLVQRII----YEVDDPSLPNDEGITALHNAVCAGHTEIVKFL--------VQFGVNVNAADSDGWTP   70 (130)
T ss_dssp             HHHHHHHHHTCHHHHHHHT----STTSSCCCCCTTSCCHHHHHHHHTCHHHHHHH--------HHHTCCTTCCCTTCCCH
T ss_pred             HHHHHHHHcCCHHHHHHHH----HcCCCccccccccccccccccccccccccccc--------cccccccccccccCccc
Confidence            5799999999999999999    5789999999999999999999999999 888        78899999999999999


Q ss_pred             HHHHHhcCCchHHHHHHHHHHcCCC
Q 019816          115 EHINRYGFPELEKEIKELAKADGNG  139 (335)
Q Consensus       115 l~~a~~~~~~~~~~i~~~l~~~~~~  139 (335)
                      ||+|+..+..   ++++.|.+.|+.
T Consensus        71 Lh~A~~~g~~---~~v~~Ll~~ga~   92 (130)
T d1ycsb1          71 LHCAASCNNV---QVCKFLVESGAA   92 (130)
T ss_dssp             HHHHHHTTCH---HHHHHHHHTTCC
T ss_pred             ccccchhhHH---HHHHHHHHcCCC
Confidence            9999988854   788888887765

>d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p16ink4A
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.55  E-value=1e-15  Score=118.48  Aligned_cols=83  Identities=13%  Similarity=0.037  Sum_probs=74.3

Q ss_pred             CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCC-chHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHH
Q 019816            1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGW-NVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLA   79 (335)
Q Consensus         1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~-t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa   79 (335)
                      +||||+| ..|+.+++++|++++++++. +|..|. ||||+|+.+|+.+++++|+    ..|++++.+|.+|+||||+|+
T Consensus        37 ~t~l~~a-~~g~~~~v~~Ll~~ga~~~~-~~~~~~~~~L~~A~~~g~~~~v~~Ll----~~ga~~~~~d~~G~T~l~~A~  110 (125)
T d1bi7b_          37 RRPIQVM-MMGSARVAELLLLHGAEPNC-ADPATLTRPVHDAAREGFLDTLVVLH----RAGARLDVRDAWGRLPVDLAE  110 (125)
T ss_dssp             CCTTTSS-CTTCHHHHHHHHTTTCCCCC-CCTTTCCCHHHHHHHHTCHHHHHHHH----HHTCCSSCCCTTCCCHHHHHH
T ss_pred             ccccccc-cccccccccccccccccccc-cccccccccccccccccccccccccc----ccccccccccCCCCCHHHHHH
Confidence            5899976 47999999999999999866 566655 7999999999999999999    578999999999999999999


Q ss_pred             hcCCCCc-ccc
Q 019816           80 AVCPDPR-PYN   89 (335)
Q Consensus        80 ~~g~~~~-~lL   89 (335)
                      +.|+.++ ++|
T Consensus       111 ~~g~~~~v~~L  121 (125)
T d1bi7b_         111 ELGHRDVARYL  121 (125)
T ss_dssp             HHTCHHHHHHH
T ss_pred             HcCCHHHHHHH
Confidence            9999998 766

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.51  E-value=6.1e-15  Score=129.00  Aligned_cols=120  Identities=14%  Similarity=0.039  Sum_probs=100.1

Q ss_pred             CchHhHHHhcCCHHHHHHHhhh-CCCccccccCCCCchHHHHHhcC----CHhHHHHHHhcCCcccccccccCCCCCchh
Q 019816            1 MTALHLAAGQGNDWIVQEIIQR-CPECCELVDDRGWNVLHFAMVSF----DKSDLKHLLNEYPVVKNLIFEKDVKGNTPF   75 (335)
Q Consensus         1 ~TpLH~Aa~~G~~e~v~~Ll~~-~~~~~~~~d~~G~t~Lh~A~~~g----~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpL   75 (335)
                      +||||+|+++|+.++++.|+++ +.++ ...|..|.++++.+...+    ..++++.|+    +.|+++|.+|.+|+|||
T Consensus       149 ~t~L~~A~~~~~~~~~~~Ll~~~~~~i-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Li----~~ga~~n~~~~~g~t~L  223 (285)
T d1wdya_         149 ATALMDAAEKGHVEVLKILLDEMGADV-NACDNMGRNALIHALLSSDDSDVEAITHLLL----DHGADVNVRGERGKTPL  223 (285)
T ss_dssp             CCHHHHHHHHTCHHHHHHHHHTSCCCT-TCCCTTSCCHHHHHHHCSCTTTHHHHHHHHH----HTTCCSSCCCTTSCCHH
T ss_pred             chHHHHHHHcCCHHHHHHHHhccCCCc-ccccCCCCcccccccccccchHHHHHHHHHH----HCCCCCCccCCCCCCcc
Confidence            4899999999999999999976 5566 447889999888765543    346788888    57889999999999999


Q ss_pred             HHHHhcCCCCc-ccccccCcccccccccccccccCCCCCHHHHHHhcCC-chHHHHHHH
Q 019816           76 HVLAAVCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNISVEHINRYGFP-ELEKEIKEL  132 (335)
Q Consensus        76 H~Aa~~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~Tpl~~a~~~~~-~~~~~i~~~  132 (335)
                      |+|++.|+.++ ++|.       ...+++++.+|.+|.||||+|++.+. +..+.+++.
T Consensus       224 ~~a~~~~~~~~v~~lL-------~~~g~din~~d~~G~TpL~~A~~~~~~eiv~~Ll~~  275 (285)
T d1wdya_         224 ILAVEKKHLGLVQRLL-------EQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKR  275 (285)
T ss_dssp             HHHHHTTCHHHHHHHH-------HSSSCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHH
T ss_pred             chhhhcCcHHHHHHHH-------HcCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHHC
Confidence            99999999988 6650       35689999999999999999997665 778999873

>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Neurogenic locus notch receptor domain
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.51  E-value=8.1e-15  Score=122.54  Aligned_cols=84  Identities=21%  Similarity=0.026  Sum_probs=78.2

Q ss_pred             CchHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHh
Q 019816            1 MTALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAA   80 (335)
Q Consensus         1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~   80 (335)
                      +||||.|+..|..++++.+++.+.+++. .|.+|+||||+|+.+|+.++++.|+    ..|+++|.+|.+|+||||+|++
T Consensus       124 ~t~l~~~~~~~~~~~~~~l~~~~~~~~~-~d~~g~TpL~~A~~~g~~~~v~~Ll----~~gad~n~~d~~g~Tpl~~A~~  198 (209)
T d1ot8a_         124 KTALHWAAAVNNTEAVNILLMHHANRDA-QDDKDETPLFLAAREGSYEASKALL----DNFANREITDHMDRLPRDVASE  198 (209)
T ss_dssp             CBHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTCCCHHHHHHHTTCHHHHHHHH----HTTCCTTCCCTTSCCHHHHHHH
T ss_pred             CCcchhhcccCcceeeeeeccccccccc-cccccccccchhccccHHHHHHHHH----HCCCCCCCcCCCCCCHHHHHHH
Confidence            5899999999999999999999998865 7999999999999999999999999    5789999999999999999999


Q ss_pred             cCCCCc-ccc
Q 019816           81 VCPDPR-PYN   89 (335)
Q Consensus        81 ~g~~~~-~lL   89 (335)
                      .|+.++ ++|
T Consensus       199 ~~~~~iv~lL  208 (209)
T d1ot8a_         199 RLHHDIVRLL  208 (209)
T ss_dssp             TTCHHHHHHH
T ss_pred             cCCHHHHhhc
Confidence            999887 665

>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Swi6 ankyrin-repeat fragment
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.47  E-value=2.4e-14  Score=127.31  Aligned_cols=57  Identities=18%  Similarity=0.070  Sum_probs=49.7

Q ss_pred             CCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHhcCC
Q 019816           23 CPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAAVCP   83 (335)
Q Consensus        23 ~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~~g~   83 (335)
                      +.+++...|.+|+||||+||..|+.++++.|+    ..|++++.+|..|+||||.|+..++
T Consensus        96 ~~dvn~~~D~~G~T~LH~Aa~~g~~~~v~~Ll----~~gad~~~~d~~G~TpL~~A~~~~~  152 (301)
T d1sw6a_          96 QLNLNIPVDEHGNTPLHWLTSIANLELVKHLV----KHGSNRLYGDNMGESCLVKAVKSVN  152 (301)
T ss_dssp             CCCSCSCCSTTCCCHHHHHHHTTCHHHHHHHH----HTTCCTTBCCTTCCCHHHHHHHSSH
T ss_pred             CCCcCcCcCCCCCCHHHHHHHcCCHHHHHHHH----HCCCCCCcCCcccccHHHHhhhccc
Confidence            33555445899999999999999999999999    5789999999999999999998654

>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]}

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Pseudo ankyrin repeat-like
family: Pseudo ankyrin repeat
domain: Hypothetical protein LPG2416
species: Legionella pneumophila [TaxId: 446]

Probab=99.44  E-value=1.1e-15  Score=139.08  Aligned_cols=103  Identities=9%  Similarity=0.011  Sum_probs=81.9

Q ss_pred             CchHhHHHhcCCHHHHHHHhhhCCCcccc-ccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHH
Q 019816            1 MTALHLAAGQGNDWIVQEIIQRCPECCEL-VDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLA   79 (335)
Q Consensus         1 ~TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~-~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa   79 (335)
                      +||||+||+.||.++|++|++.+++.... .+.+|+||||+|+.+|+.+++++|++. .......+..+.+|.||+|.|+
T Consensus       127 ~taL~~Aa~~G~~~~v~~Ll~~g~~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~-~~~~~~~~~~~~~~~t~l~~A~  205 (346)
T d2ajaa1         127 YQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAENYHAFRLAAENGHLHVLNRLCEL-APTEATAMIQAENYYAFRWAAV  205 (346)
T ss_dssp             HHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHHHHHHHHHHHTTCHHHHHHHHHS-CGGGHHHHHHHHHHHHHHHHHS
T ss_pred             CCHHHHHHHCCCHHHHHHHHHcCCCccccccccCCCChhHHHHHHhhHHHHHHHHHc-CCcccccccccCCCcchhhHHh
Confidence            48999999999999999999999988552 234699999999999999999999932 1112234556677889999999


Q ss_pred             hcCCCCc-ccccccCcccccccccccccccCCCC
Q 019816           80 AVCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQNI  112 (335)
Q Consensus        80 ~~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~G~  112 (335)
                      ..|+.++ ++|        ++.|++++..+..+.
T Consensus       206 ~~g~~~iv~~L--------l~~ga~~~~~~~~~~  231 (346)
T d2ajaa1         206 GRGHHNVINFL--------LDCPVMLAYAEIHEF  231 (346)
T ss_dssp             TTCCHHHHHHH--------TTSHHHHHHHHHCTT
T ss_pred             hcCHHHHHHHH--------HhCCCCcchHHHHHH
Confidence            9999999 888        788887765544333

>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: GA bindinig protein (GABP) beta 1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.43  E-value=7.5e-14  Score=110.85  Aligned_cols=83  Identities=18%  Similarity=0.183  Sum_probs=68.0

Q ss_pred             chHhHHHhcCCHHHHHHHhhhCCCccccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHhc
Q 019816            2 TALHLAAGQGNDWIVQEIIQRCPECCELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAAV   81 (335)
Q Consensus         2 TpLH~Aa~~G~~e~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~~   81 (335)
                      +++|.++...+.+.++.++..+.+... +|.+|+||||+|+..|+.+++++|+    +.|+++|.+|.+|+||||+|+..
T Consensus        69 ~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~g~T~L~~A~~~g~~~iv~~ll----~~gad~~~~d~~g~Tpl~~A~~~  143 (153)
T d1awcb_          69 TPLHMAASEGHANIVEVLLKHGADVNA-KDMLKMTALHWATEHNHQEVVELLI----KYGADVHTQSKFCKTAFDISIDN  143 (153)
T ss_dssp             CHHHHHHHHTCHHHHHHHHTTTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHH----HTTCCTTCCCTTSCCHHHHHHHT
T ss_pred             cccccccccccceeeecccccCCcccc-ccccCchHHHhhhhcchhheeeecc----ccccCCcccCCCCCCHHHHHHHc
Confidence            345555555555666666666666644 7999999999999999999999999    57899999999999999999999


Q ss_pred             CCCCc-ccc
Q 019816           82 CPDPR-PYN   89 (335)
Q Consensus        82 g~~~~-~lL   89 (335)
                      |+.++ ++|
T Consensus       144 g~~eiv~lL  152 (153)
T d1awcb_         144 GNEDLAEIL  152 (153)
T ss_dssp             TCHHHHHHH
T ss_pred             CCHHHHHhC
Confidence            99887 665

>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myosin phosphatase targeting subunit 1, MYPT1
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.42  E-value=4.8e-14  Score=123.86  Aligned_cols=82  Identities=22%  Similarity=0.118  Sum_probs=62.3

Q ss_pred             ccccCCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHhcCCCCc--ccccccCcccccccccccc
Q 019816           28 ELVDDRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAAVCPDPR--PYNAGYGIIPYKIAKGYYQ  105 (335)
Q Consensus        28 ~~~d~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~~g~~~~--~lL~~~~~~~~~~~~~~~~  105 (335)
                      ...+..|.||||+|+..|+.++++.|+    ..|+++|.+|.+|+||||+|++.|+.++  .++        . .|+|++
T Consensus       193 ~~~~~~g~t~L~~a~~~~~~~~~~~Ll----~~g~din~~~~~g~TpL~~A~~~g~~~iv~lLl--------~-~Gadv~  259 (291)
T d1s70b_         193 VRHAKSGGTALHVAAAKGYTEVLKLLI----QARYDVNIKDYDGWTPLHAAAHWGKEEACRILV--------E-NLCDME  259 (291)
T ss_dssp             CCCTTTCCCHHHHHHHHTCHHHHHHHH----TTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHH--------H-TTCCTT
T ss_pred             ccccCCCCChhhHHHHcCChhhhcccc----cceecccccccCCCCHHHHHHHcCCHHHHHHHH--------H-CCCCCC
Confidence            335677888888888888888888887    4677778888888888888888888777  445        3 577788


Q ss_pred             cccCCCCCHHHHHHhcC
Q 019816          106 AVNKQNISVEHINRYGF  122 (335)
Q Consensus       106 ~~n~~G~Tpl~~a~~~~  122 (335)
                      .+|++|+||||+|++..
T Consensus       260 ~~d~~G~TaL~~A~e~~  276 (291)
T d1s70b_         260 AVNKVGQTAFDVADEDI  276 (291)
T ss_dssp             CCCTTSCCTTTSCCSGG
T ss_pred             CcCCCCCCHHHHHHHHH
Confidence            88888888888888763

>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: bcl-3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.34  E-value=3.7e-13  Score=111.93  Aligned_cols=85  Identities=15%  Similarity=0.101  Sum_probs=76.6

Q ss_pred             CCCCchHHHHHhcCCHhHHHHHHhcCCcccccccccCCCCCchhHHHHhcCCCCc-ccccccCcccccccccccccccCC
Q 019816           32 DRGWNVLHFAMVSFDKSDLKHLLNEYPVVKNLIFEKDVKGNTPFHVLAAVCPDPR-PYNAGYGIIPYKIAKGYYQAVNKQ  110 (335)
Q Consensus        32 ~~G~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~n~~d~~G~TpLH~Aa~~g~~~~-~lL~~~~~~~~~~~~~~~~~~n~~  110 (335)
                      ++|+||||+||.+|+.++++.|++.+...++++|.+|.+|+||||+|+..|+.++ ++|        +..+++.+..+.+
T Consensus         1 ~dG~TpLh~A~~~g~~~~v~~Ll~~~~~~g~~in~~d~~g~TpL~~A~~~~~~~iv~~L--------l~~ga~~~~~~~~   72 (228)
T d1k1aa_           1 EDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLL--------VTAGASPMALDRH   72 (228)
T ss_dssp             CTTCCHHHHHHHTTCHHHHHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHH--------HHTTCCTTCCCTT
T ss_pred             CCCccHHHHHHHcCCHHHHHHHHHHHHHCCCCCCccCCCCCccceehhccccccccccc--------ccccccccccccc
Confidence            4799999999999999999999865555788999999999999999999999999 877        7889999999999


Q ss_pred             CCCHHHHHHhcCCc
Q 019816          111 NISVEHINRYGFPE  124 (335)
Q Consensus       111 G~Tpl~~a~~~~~~  124 (335)
                      |.++++.|......
T Consensus        73 ~~~~~~~a~~~~~~   86 (228)
T d1k1aa_          73 GQTAAHLACEHRSP   86 (228)
T ss_dssp             SCCHHHHHHHTTCH
T ss_pred             cccccccccccccc
Confidence            99999999977654